Query         047591
Match_columns 1624
No_of_seqs    1345 out of 8490
Neff          8.2 
Searched_HMMs 29240
Date          Mon Mar 25 22:22:47 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047591.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047591hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3rgz_A Protein brassinosteroid 100.0 8.3E-87 2.9E-91  892.0  44.9  542   32-632     6-558 (768)
  2 3rgz_A Protein brassinosteroid 100.0 9.4E-73 3.2E-77  756.1  32.4  564   89-677   100-751 (768)
  3 4eco_A Uncharacterized protein 100.0 2.9E-59   1E-63  611.6  18.2  500   37-625    29-600 (636)
  4 1ziw_A TOLL-like receptor 3; i 100.0 1.2E-56   4E-61  594.4  39.2  550   76-641     3-614 (680)
  5 4ecn_A Leucine-rich repeat pro 100.0   7E-57 2.4E-61  597.6  27.9  518   35-625   266-864 (876)
  6 1ziw_A TOLL-like receptor 3; i 100.0   1E-54 3.5E-59  575.7  39.7  548   93-654     8-601 (680)
  7 3t6q_A CD180 antigen; protein- 100.0 2.5E-55 8.4E-60  573.8  32.9  510  104-629    26-564 (606)
  8 3t6q_A CD180 antigen; protein- 100.0   1E-53 3.6E-58  558.4  36.0  500  119-643    18-554 (606)
  9 3j0a_A TOLL-like receptor 5; m 100.0 2.7E-53 9.1E-58  573.8  39.4  526   77-629    14-564 (844)
 10 3vq2_A TLR4, TOLL-like recepto 100.0 3.4E-54 1.2E-58  563.0  28.4  519   89-630    32-563 (606)
 11 3vq2_A TLR4, TOLL-like recepto 100.0 1.4E-52 4.9E-57  547.7  27.3  517   94-641    16-550 (606)
 12 3j0a_A TOLL-like receptor 5; m 100.0 7.8E-51 2.7E-55  549.7  38.5  511   97-639    12-553 (844)
 13 4asz_A BDNF/NT-3 growth factor 100.0 1.5E-51   5E-56  483.9  16.2  257 1336-1616   14-290 (299)
 14 4aoj_A High affinity nerve gro 100.0 4.9E-51 1.7E-55  486.0  20.7  257 1336-1616   42-320 (329)
 15 3omv_A RAF proto-oncogene seri 100.0 3.7E-51 1.3E-55  480.2  18.9  262 1335-1618   36-303 (307)
 16 4gt4_A Tyrosine-protein kinase 100.0   1E-50 3.5E-55  478.8  17.0  250 1340-1613   31-304 (308)
 17 2z81_A CD282 antigen, TOLL-lik 100.0 7.8E-50 2.7E-54  515.4  26.7  494   76-630     3-515 (549)
 18 2z63_A TOLL-like receptor 4, v 100.0 5.7E-49 1.9E-53  509.7  27.8  498  105-630    22-536 (570)
 19 3hmm_A TGF-beta receptor type- 100.0 5.4E-49 1.9E-53  465.2  19.5  274 1337-1616    5-298 (303)
 20 4eco_A Uncharacterized protein 100.0 1.7E-49 5.7E-54  519.3  16.2  461  113-651    81-601 (636)
 21 2z63_A TOLL-like receptor 4, v 100.0 1.3E-47 4.4E-52  496.9  29.0  476   89-606    28-536 (570)
 22 4ecn_A Leucine-rich repeat pro 100.0 2.2E-48 7.6E-53  516.2  22.0  443  113-631   323-846 (876)
 23 4ase_A Vascular endothelial gr 100.0 2.8E-48 9.6E-53  465.9  18.9  266 1327-1615   56-347 (353)
 24 2z7x_B TOLL-like receptor 1, v 100.0 2.2E-47 7.4E-52  489.1  24.4  455  116-630     3-486 (520)
 25 4fih_A Serine/threonine-protei 100.0 1.3E-47 4.5E-52  455.4  19.0  249 1336-1609   75-324 (346)
 26 2z81_A CD282 antigen, TOLL-lik 100.0 4.1E-47 1.4E-51  489.9  25.2  485   76-605    11-514 (549)
 27 4b9d_A Serine/threonine-protei 100.0 1.2E-47 4.1E-52  456.4  17.2  250 1335-1609   24-277 (350)
 28 4g3f_A NF-kappa-beta-inducing  100.0 2.1E-47 7.2E-52  452.4  19.1  254 1335-1616   58-317 (336)
 29 3fpq_A Serine/threonine-protei 100.0 4.1E-47 1.4E-51  442.8  21.1  245 1339-1608   30-282 (290)
 30 2z7x_B TOLL-like receptor 1, v 100.0 2.8E-47 9.7E-52  488.1  21.4  461   93-605     4-485 (520)
 31 4fie_A Serine/threonine-protei 100.0 2.3E-46 7.7E-51  455.4  20.7  250 1335-1609  151-401 (423)
 32 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.4E-47 2.9E-51  441.9  15.6  248 1335-1608   32-284 (311)
 33 3hyh_A Carbon catabolite-derep 100.0   2E-45 6.8E-50  424.7  19.9  246 1335-1609   13-263 (275)
 34 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-44 5.6E-49  473.6  27.4  494  114-627    53-582 (635)
 35 4g31_A Eukaryotic translation  100.0 5.2E-45 1.8E-49  429.0  19.5  247 1336-1608    6-279 (299)
 36 3ubd_A Ribosomal protein S6 ki 100.0 7.3E-46 2.5E-50  434.2  11.7  247 1335-1608   24-281 (304)
 37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7.3E-45 2.5E-49  470.0  21.3  466   92-630    34-515 (562)
 38 4asz_A BDNF/NT-3 growth factor 100.0 6.3E-45 2.2E-49  427.5  16.0  202  744-948    13-234 (299)
 39 4aoj_A High affinity nerve gro 100.0 1.9E-44 6.4E-49  429.4  18.6  201  745-948    42-264 (329)
 40 3omv_A RAF proto-oncogene seri 100.0 2.9E-44   1E-48  421.7  18.2  199  744-948    36-240 (307)
 41 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-43 4.1E-48  458.7  23.2  439   89-605    52-514 (562)
 42 4g8a_A TOLL-like receptor 4; l 100.0 5.6E-43 1.9E-47  459.1  27.9  488  128-643    45-574 (635)
 43 4gt4_A Tyrosine-protein kinase 100.0 4.4E-44 1.5E-48  422.1  15.3  200  746-948    28-251 (308)
 44 4fih_A Serine/threonine-protei 100.0 3.9E-43 1.3E-47  417.1  18.2  198  744-947    74-272 (346)
 45 4b9d_A Serine/threonine-protei 100.0 3.3E-43 1.1E-47  418.2  16.4  200  744-947    24-227 (350)
 46 4aw0_A HPDK1, 3-phosphoinositi 100.0   4E-43 1.4E-47  410.8  15.9  200  744-947    32-236 (311)
 47 3fpq_A Serine/threonine-protei 100.0 8.1E-43 2.8E-47  406.5  18.3  195  747-947    29-231 (290)
 48 3v47_A TOLL-like receptor 5B a 100.0 1.7E-41 5.9E-46  426.8  27.3  372  113-604    30-411 (455)
 49 4fie_A Serine/threonine-protei 100.0 3.3E-42 1.1E-46  418.8  19.6  198  744-947   151-349 (423)
 50 3hmm_A TGF-beta receptor type- 100.0 4.1E-43 1.4E-47  414.9  11.3  198  745-946     4-219 (303)
 51 1jl5_A Outer protein YOPM; leu 100.0 1.9E-41 6.4E-46  424.3  26.6  405  136-633    10-419 (454)
 52 1jl5_A Outer protein YOPM; leu 100.0 8.5E-42 2.9E-46  427.4  23.5  412   89-635    11-439 (454)
 53 4b99_A Mitogen-activated prote 100.0 7.4E-42 2.5E-46  417.3  21.5  267 1335-1608   54-344 (398)
 54 4g3f_A NF-kappa-beta-inducing  100.0 3.3E-42 1.1E-46  407.9  16.4  198  744-950    58-261 (336)
 55 4f9c_A Cell division cycle 7-r 100.0 7.2E-42 2.5E-46  413.1  19.4  198 1333-1539   19-250 (361)
 56 3ubd_A Ribosomal protein S6 ki 100.0 1.8E-42 6.2E-47  405.4  12.0  199  744-947    24-228 (304)
 57 4ase_A Vascular endothelial gr 100.0 8.3E-42 2.8E-46  409.7  16.1  210  737-949    57-292 (353)
 58 3uim_A Brassinosteroid insensi 100.0 1.6E-41 5.3E-46  407.6  18.2  286 1320-1612   15-308 (326)
 59 3hyh_A Carbon catabolite-derep 100.0 2.2E-41 7.5E-46  391.0  18.7  197  744-947    13-214 (275)
 60 3uto_A Twitchin; kinase, muscl 100.0 3.8E-41 1.3E-45  431.1  19.3  251 1335-1608  157-410 (573)
 61 1ogq_A PGIP-2, polygalacturona 100.0 3.4E-41 1.2E-45  402.0  17.5  298   34-380     2-308 (313)
 62 3s95_A LIMK-1, LIM domain kina 100.0 1.5E-40   5E-45  396.2  20.7  262 1335-1618   10-285 (310)
 63 3v5w_A G-protein coupled recep 100.0 8.3E-41 2.8E-45  423.0  19.2  247 1335-1608  189-449 (689)
 64 3bz5_A Internalin-J, INLJ; leu 100.0 4.8E-40 1.7E-44  411.9  26.0  366  100-608    29-394 (457)
 65 2qkw_B Protein kinase; three-h 100.0 6.3E-41 2.2E-45  401.5  16.0  282 1324-1615   28-315 (321)
 66 3v47_A TOLL-like receptor 5B a 100.0 2.9E-40 9.9E-45  415.6  21.9  376  210-630    30-413 (455)
 67 4g31_A Eukaryotic translation  100.0 2.4E-40 8.3E-45  389.2  16.7  197  744-946     5-228 (299)
 68 2nru_A Interleukin-1 receptor- 100.0 5.2E-39 1.8E-43  382.1  28.3  281 1321-1615   11-306 (307)
 69 3soc_A Activin receptor type-2 100.0 7.6E-40 2.6E-44  392.2  19.3  277 1334-1616   23-319 (322)
 70 2psq_A Fibroblast growth facto 100.0 2.3E-39 7.7E-44  395.5  22.3  259 1335-1617   81-366 (370)
 71 3cbl_A C-FES, proto-oncogene t 100.0   6E-40 2.1E-44  401.9  17.2  260 1333-1616  112-375 (377)
 72 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.6E-39 5.6E-44  378.4  18.5  258 1334-1616    7-265 (268)
 73 3kul_A Ephrin type-A receptor  100.0 2.2E-39 7.6E-44  388.6  20.0  258 1335-1616   49-314 (325)
 74 2qol_A Ephrin receptor; recept 100.0 1.6E-39 5.3E-44  397.2  18.6  258 1335-1616   45-310 (373)
 75 3fxz_A Serine/threonine-protei 100.0 5.7E-39   2E-43  379.9  22.5  250 1335-1609   20-270 (297)
 76 3p86_A Serine/threonine-protei 100.0 1.8E-39   6E-44  386.5  17.7  264 1328-1616   30-299 (309)
 77 4hcu_A Tyrosine-protein kinase 100.0 1.8E-39 6.1E-44  378.4  17.3  257 1335-1616   10-267 (269)
 78 3ugc_A Tyrosine-protein kinase 100.0 1.8E-39 6.2E-44  383.8  16.7  270 1335-1617   10-293 (295)
 79 2c30_A Serine/threonine-protei 100.0   8E-39 2.7E-43  383.0  22.1  262 1323-1609   23-295 (321)
 80 3q4u_A Activin receptor type-1 100.0   7E-39 2.4E-43  379.6  19.6  263 1334-1613    7-300 (301)
 81 4aw2_A Serine/threonine-protei 100.0 4.3E-39 1.5E-43  399.4  17.7  264 1325-1609   64-339 (437)
 82 1qcf_A Haematopoetic cell kina 100.0 1.1E-39 3.9E-44  409.3  12.2  261 1333-1619  186-448 (454)
 83 3lb7_A RAF proto-oncogene seri 100.0 8.1E-39 2.8E-43  380.5  18.0  262 1334-1617   35-302 (307)
 84 3vhe_A Vascular endothelial gr 100.0   6E-39   2E-43  390.5  16.7  270 1324-1616   11-356 (359)
 85 4eqm_A Protein kinase; transfe 100.0 1.5E-38 5.3E-43  375.7  19.6  259 1335-1614   11-274 (294)
 86 3gen_A Tyrosine-protein kinase 100.0 8.5E-39 2.9E-43  375.6  16.9  258 1334-1616   23-281 (283)
 87 3op5_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43  388.9  18.1  270 1333-1617   33-331 (364)
 88 3zgw_A Maternal embryonic leuc 100.0 1.4E-38 4.9E-43  383.7  18.5  250 1334-1609    9-261 (347)
 89 1mp8_A Focal adhesion kinase 1 100.0 1.9E-38 6.4E-43  372.4  19.0  258 1334-1616   14-277 (281)
 90 1k9a_A Carboxyl-terminal SRC k 100.0 2.6E-38 8.9E-43  396.3  21.4  253 1333-1616  191-446 (450)
 91 3poz_A Epidermal growth factor 100.0 1.3E-38 4.5E-43  382.4  17.8  256 1335-1615   15-278 (327)
 92 3fe3_A MAP/microtubule affinit 100.0 2.8E-38 9.6E-43  378.9  20.5  248 1334-1609   14-265 (328)
 93 3niz_A Rhodanese family protei 100.0 7.1E-38 2.4E-42  373.2  22.8  269 1335-1609   21-301 (311)
 94 1tki_A Titin; serine kinase, m 100.0 3.4E-38 1.2E-42  377.4  19.6  252 1334-1609    4-258 (321)
 95 1opk_A P150, C-ABL, proto-onco 100.0 1.2E-38   4E-43  404.0  16.1  255 1334-1613  219-476 (495)
 96 1luf_A Muscle-specific tyrosin 100.0 1.2E-38 4.1E-43  385.2  15.3  265 1331-1619   43-339 (343)
 97 3l9p_A Anaplastic lymphoma kin 100.0 1.4E-38 4.9E-43  388.1  15.9  258 1335-1616   71-346 (367)
 98 1csn_A Casein kinase-1; phosph 100.0 8.8E-38   3E-42  369.6  21.9  265 1334-1618    9-286 (298)
 99 3bz5_A Internalin-J, INLJ; leu 100.0 5.4E-38 1.8E-42  393.3  21.0  369  170-632    26-394 (457)
100 2izr_A Casein kinase I isoform 100.0 4.6E-38 1.6E-42  378.1  19.6  262 1335-1617    9-283 (330)
101 3p1a_A MYT1 kinase, membrane-a 100.0 4.3E-38 1.5E-42  375.1  19.1  244 1335-1608   57-304 (311)
102 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 6.8E-39 2.3E-43  401.8  12.6  257 1334-1616  183-441 (452)
103 3v5w_A G-protein coupled recep 100.0 4.2E-38 1.4E-42  398.3  19.9  198  744-948   189-394 (689)
104 3t9t_A Tyrosine-protein kinase 100.0   3E-38   1E-42  367.3  17.1  257 1335-1616    8-265 (267)
105 3tt0_A Basic fibroblast growth 100.0 6.3E-38 2.2E-42  384.7  20.8  259 1334-1616   68-353 (382)
106 4b99_A Mitogen-activated prote 100.0 2.9E-38 9.9E-43  385.6  17.6  200  743-947    53-265 (398)
107 4f9c_A Cell division cycle 7-r 100.0 5.1E-38 1.8E-42  379.5  18.9  202  737-947    14-249 (361)
108 2vd5_A DMPK protein; serine/th 100.0 2.1E-38 7.1E-43  390.5  15.7  263 1325-1608   51-327 (412)
109 2eva_A TAK1 kinase - TAB1 chim 100.0 4.7E-38 1.6E-42  374.0  18.2  255 1335-1617    8-265 (307)
110 3c0i_A Peripheral plasma membr 100.0 9.8E-38 3.4E-42  378.4  21.2  251 1335-1608   24-286 (351)
111 3cc6_A Protein tyrosine kinase 100.0 8.7E-38   3E-42  366.6  20.0  258 1334-1616   11-274 (281)
112 2yab_A Death-associated protei 100.0 1.1E-37 3.8E-42  378.2  21.5  251 1334-1608   11-272 (361)
113 4fvq_A Tyrosine-protein kinase 100.0 1.9E-38 6.5E-43  373.7  13.9  254 1335-1618    8-278 (289)
114 1o6l_A RAC-beta serine/threoni 100.0 1.7E-37 5.8E-42  373.2  22.2  248 1335-1609    5-261 (337)
115 3mdy_A Bone morphogenetic prot 100.0 1.7E-37   6E-42  373.9  22.2  266 1334-1616   36-332 (337)
116 3tki_A Serine/threonine-protei 100.0 5.4E-38 1.8E-42  376.1  17.3  252 1335-1609    7-262 (323)
117 1rjb_A FL cytokine receptor; k 100.0 8.2E-38 2.8E-42  378.2  18.9  265 1332-1619   42-338 (344)
118 3kmu_A ILK, integrin-linked ki 100.0 5.6E-38 1.9E-42  365.6  16.7  251 1335-1615   10-270 (271)
119 1t46_A HOMO sapiens V-KIT hard 100.0 9.9E-38 3.4E-42  371.9  19.0  262 1334-1618   22-310 (313)
120 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-37 4.1E-42  371.4  19.6  259 1334-1616   22-312 (314)
121 3qup_A Tyrosine-protein kinase 100.0 4.7E-38 1.6E-42  376.8  16.1  261 1331-1615   19-298 (323)
122 3og7_A AKAP9-BRAF fusion prote 100.0 5.8E-38   2E-42  369.8  16.6  259 1334-1614   23-287 (289)
123 2x4f_A Myosin light chain kina 100.0 1.2E-37 4.2E-42  380.2  19.9  247 1339-1608   93-342 (373)
124 3v8s_A RHO-associated protein  100.0 1.9E-38 6.6E-43  390.6  12.8  259 1327-1609   61-330 (410)
125 4f0f_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42  368.3  17.3  253 1334-1613   18-287 (287)
126 3dtc_A Mitogen-activated prote 100.0 8.9E-38   3E-42  364.3  17.6  253 1335-1613    7-271 (271)
127 3c1x_A Hepatocyte growth facto 100.0   4E-38 1.4E-42  384.3  15.3  258 1337-1618   91-358 (373)
128 3g2f_A Bone morphogenetic prot 100.0 4.5E-38 1.5E-42  379.1  14.9  280 1334-1619   12-322 (336)
129 3lxl_A Tyrosine-protein kinase 100.0 6.9E-38 2.4E-42  376.1  16.4  270 1335-1616   23-304 (327)
130 1qpc_A LCK kinase; alpha beta  100.0 6.7E-38 2.3E-42  367.1  15.9  259 1334-1618   12-272 (279)
131 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-37   5E-42  371.7  19.0  271 1337-1619   33-314 (318)
132 4e5w_A Tyrosine-protein kinase 100.0   4E-38 1.4E-42  373.4  13.9  266 1336-1614   22-301 (302)
133 1mqb_A Ephrin type-A receptor  100.0 2.8E-37 9.6E-42  371.7  21.0  258 1335-1616   44-310 (333)
134 2pvf_A Fibroblast growth facto 100.0   3E-37   1E-41  371.7  21.2  260 1334-1617   34-320 (334)
135 2ozo_A Tyrosine-protein kinase 100.0   1E-37 3.5E-42  404.5  18.2  253 1342-1619  343-602 (613)
136 3kex_A Receptor tyrosine-prote 100.0 5.2E-38 1.8E-42  376.9  14.3  256 1335-1615   13-276 (325)
137 2y0a_A Death-associated protei 100.0 3.1E-37 1.1E-41  370.1  20.9  251 1335-1609   11-272 (326)
138 1kob_A Twitchin; kinase, intra 100.0 1.3E-37 4.4E-42  381.1  17.6  252 1335-1609   51-305 (387)
139 3kfa_A Tyrosine-protein kinase 100.0 5.3E-38 1.8E-42  369.7  13.5  261 1331-1616    9-272 (288)
140 1b6c_B TGF-B superfamily recep 100.0 3.9E-37 1.3E-41  371.7  21.3  269 1332-1617   39-338 (342)
141 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.7E-37 5.8E-42  375.7  17.9  248 1334-1608   22-280 (353)
142 3pls_A Macrophage-stimulating  100.0 3.3E-37 1.1E-41  364.7  19.8  259 1337-1618   23-290 (298)
143 1u59_A Tyrosine-protein kinase 100.0 4.4E-37 1.5E-41  361.9  20.9  257 1337-1618   11-275 (287)
144 2bdw_A Hypothetical protein K1 100.0 1.6E-37 5.5E-42  377.8  17.2  251 1335-1609   29-285 (362)
145 4dc2_A Protein kinase C IOTA t 100.0 5.1E-37 1.8E-41  375.8  21.7  252 1334-1603   51-307 (396)
146 4euu_A Serine/threonine-protei 100.0 7.3E-37 2.5E-41  365.8  22.5  273 1335-1613    9-307 (319)
147 2xir_A Vascular endothelial gr 100.0 2.2E-37 7.6E-42  369.4  18.0  270 1325-1617   17-312 (316)
148 2w1i_A JAK2; chromosomal rearr 100.0 2.2E-37 7.4E-42  371.6  18.0  271 1335-1618   41-325 (326)
149 1ob3_A PFPK5, cell division co 100.0 1.1E-37 3.7E-42  367.3  15.1  268 1335-1608    2-280 (288)
150 4hgt_A Casein kinase I isoform 100.0 7.8E-37 2.7E-41  361.0  22.5  265 1334-1618    8-283 (296)
151 2i1m_A Macrophage colony-stimu 100.0 2.3E-37 7.9E-42  372.4  18.2  267 1329-1618   40-329 (333)
152 3soa_A Calcium/calmodulin-depe 100.0   2E-37 6.8E-42  385.8  18.1  253 1334-1609   10-268 (444)
153 3qd2_B Eukaryotic translation  100.0 4.4E-37 1.5E-41  369.3  20.4  249 1335-1609    6-326 (332)
154 3f66_A Hepatocyte growth facto 100.0 3.4E-37 1.2E-41  364.7  19.2  259 1336-1618   26-294 (298)
155 2h8h_A Proto-oncogene tyrosine 100.0 4.8E-38 1.6E-42  402.0  12.6  257 1333-1615  265-523 (535)
156 3uzp_A CKI-delta, CKID, casein 100.0 1.3E-36 4.3E-41  359.3  23.6  265 1334-1618    8-283 (296)
157 3gxj_A TGF-beta receptor type- 100.0 5.2E-39 1.8E-43  381.0   3.1  266 1335-1616    3-298 (303)
158 3o0g_A Cell division protein k 100.0 3.5E-37 1.2E-41  363.6  18.2  270 1335-1609    2-283 (292)
159 3ork_A Serine/threonine protei 100.0 1.1E-37 3.7E-42  371.6  13.8  257 1335-1613   12-279 (311)
160 1o6v_A Internalin A; bacterial 100.0   3E-36   1E-40  380.0  27.8  346  111-578    44-389 (466)
161 2w4o_A Calcium/calmodulin-depe 100.0 2.5E-37 8.4E-42  374.5  16.9  250 1334-1608   52-305 (349)
162 3lzb_A Epidermal growth factor 100.0 2.7E-37 9.3E-42  370.8  16.9  258 1334-1616   14-279 (327)
163 3gni_B Strad alpha; kinase fol 100.0 1.4E-36 4.8E-41  373.9  23.5  271 1335-1609   25-334 (389)
164 2pmi_A Negative RE, cyclin-dep 100.0 7.6E-37 2.6E-41  365.3  20.5  270 1334-1609    4-294 (317)
165 3uto_A Twitchin; kinase, muscl 100.0 3.6E-37 1.2E-41  394.3  18.5  200  743-947   156-358 (573)
166 1xjd_A Protein kinase C, theta 100.0 3.3E-37 1.1E-41  371.8  17.0  250 1331-1607   13-268 (345)
167 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.9E-37 6.3E-42  372.5  14.8  246 1335-1609    9-259 (336)
168 1u5q_A Serine/threonine protei 100.0 5.3E-37 1.8E-41  371.1  18.8  245 1336-1609   55-306 (348)
169 4fr4_A YANK1, serine/threonine 100.0 1.2E-36   4E-41  371.4  22.0  249 1335-1608   15-271 (384)
170 2v62_A Serine/threonine-protei 100.0   2E-37 6.9E-42  374.9  15.1  261 1335-1614   37-327 (345)
171 1fot_A TPK1 delta, CAMP-depend 100.0 1.1E-36 3.7E-41  363.5  21.0  244 1335-1608    6-258 (318)
172 2ac3_A MAP kinase-interacting  100.0 5.7E-37 1.9E-41  366.1  18.5  263 1336-1609   13-296 (316)
173 3llt_A Serine/threonine kinase 100.0   8E-37 2.8E-41  372.0  20.1  280 1319-1608   19-355 (360)
174 3a8x_A Protein kinase C IOTA t 100.0 1.7E-36 5.7E-41  366.2  22.5  251 1335-1603    9-264 (345)
175 1p4o_A Insulin-like growth fac 100.0   1E-37 3.5E-42  373.6  11.7  265 1327-1615   17-299 (322)
176 3cok_A Serine/threonine-protei 100.0 9.7E-37 3.3E-41  357.0  19.1  248 1335-1608   11-262 (278)
177 3kn6_A Ribosomal protein S6 ki 100.0 7.8E-37 2.7E-41  366.4  18.6  250 1340-1608   16-270 (325)
178 2zv2_A Calcium/calmodulin-depe 100.0 5.8E-37   2E-41  362.9  17.3  248 1335-1608   13-292 (298)
179 2wqm_A Serine/threonine-protei 100.0 1.3E-36 4.3E-41  362.1  20.2  262 1335-1618   32-300 (310)
180 3f3z_A Calcium/calmodulin-depe 100.0   3E-36   1E-40  352.7  22.9  250 1335-1609    9-262 (277)
181 3brb_A Proto-oncogene tyrosine 100.0 4.4E-37 1.5E-41  366.6  16.2  264 1330-1617   29-310 (313)
182 2buj_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41  367.5  15.7  260 1334-1615   28-306 (317)
183 1o6v_A Internalin A; bacterial 100.0 3.1E-36 1.1E-40  379.9  24.5  357  146-626    33-389 (466)
184 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.4E-36 4.7E-41  370.6  20.6  253 1332-1616   62-340 (365)
185 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.4E-36   5E-41  367.3  20.5  244 1335-1608   41-293 (350)
186 4fl3_A Tyrosine-protein kinase 100.0 6.9E-37 2.4E-41  397.6  19.0  251 1341-1617  375-633 (635)
187 3dbq_A Dual specificity protei 100.0 5.1E-37 1.8E-41  371.0  16.4  251 1334-1609    8-274 (343)
188 2zmd_A Dual specificity protei 100.0 8.2E-37 2.8E-41  375.4  18.3  250 1335-1609   56-321 (390)
189 3byv_A Rhoptry kinase; malaria 100.0   2E-37   7E-42  379.6  12.5  251 1334-1619   72-372 (377)
190 3a62_A Ribosomal protein S6 ki 100.0 1.4E-36 4.8E-41  364.6  19.3  247 1335-1608   17-276 (327)
191 1xbb_A Tyrosine-protein kinase 100.0 1.1E-36 3.7E-41  359.2  18.1  259 1334-1618   15-282 (291)
192 3hko_A Calcium/calmodulin-depe 100.0 6.7E-37 2.3E-41  370.3  16.5  258 1331-1609   22-331 (345)
193 2i0e_A Protein kinase C-beta I 100.0 1.6E-36 5.5E-41  366.9  19.8  249 1333-1608   18-276 (353)
194 2h34_A Serine/threonine-protei 100.0 1.6E-36 5.5E-41  361.2  19.2  257 1335-1614   34-295 (309)
195 3mtl_A Cell division protein k 100.0 6.5E-37 2.2E-41  367.1  15.5  269 1335-1609    2-282 (324)
196 3oz6_A Mitogen-activated prote 100.0 1.7E-36 5.7E-41  373.0  19.5  269 1334-1609    8-329 (388)
197 1byg_A CSK, protein (C-termina 100.0 8.3E-37 2.8E-41  357.7  15.8  252 1335-1617   21-275 (278)
198 2jii_A Serine/threonine-protei 100.0 1.4E-36 4.8E-41  368.6  18.2  262 1335-1618   42-339 (352)
199 2a2a_A Death-associated protei 100.0 3.7E-36 1.3E-40  360.1  21.4  251 1335-1609   12-273 (321)
200 3kk8_A Calcium/calmodulin depe 100.0 2.5E-36 8.6E-41  354.6  19.5  252 1334-1609    5-262 (284)
201 1fvr_A Tyrosine-protein kinase 100.0 1.1E-36 3.7E-41  365.7  16.5  258 1335-1618   25-303 (327)
202 2acx_A G protein-coupled recep 100.0 2.5E-36 8.5E-41  382.8  20.5  253 1334-1609  183-445 (576)
203 4agu_A Cyclin-dependent kinase 100.0 4.1E-36 1.4E-40  357.8  21.2  269 1335-1609    3-285 (311)
204 3pg1_A Mitogen-activated prote 100.0 3.4E-36 1.2E-40  366.7  20.8  277 1326-1609   13-317 (362)
205 2clq_A Mitogen-activated prote 100.0 3.4E-36 1.1E-40  355.5  20.0  250 1336-1608   23-278 (295)
206 3sv0_A Casein kinase I-like; t 100.0 4.8E-36 1.6E-40  376.4  22.5  263 1334-1616    6-279 (483)
207 2y94_A 5'-AMP-activated protei 100.0 3.3E-36 1.1E-40  377.2  20.8  246 1335-1608   16-266 (476)
208 3uim_A Brassinosteroid insensi 100.0 9.9E-37 3.4E-41  365.8  15.0  251  727-977    13-271 (326)
209 1nxk_A MAP kinase-activated pr 100.0 4.6E-36 1.6E-40  369.9  21.1  250 1336-1609   62-322 (400)
210 3ttj_A Mitogen-activated prote 100.0 4.3E-36 1.5E-40  376.8  21.1  266 1334-1609   61-356 (464)
211 3g33_A Cell division protein k 100.0 1.8E-36 6.3E-41  360.4  16.8  270 1333-1609    7-297 (308)
212 3is5_A Calcium-dependent prote 100.0 2.1E-36 7.3E-41  355.7  17.1  249 1335-1608   22-278 (285)
213 4eut_A Serine/threonine-protei 100.0 1.4E-36 4.9E-41  374.5  16.3  277 1335-1616    9-310 (396)
214 3ll6_A Cyclin G-associated kin 100.0 2.4E-36 8.1E-41  363.8  17.8  255 1334-1616   27-309 (337)
215 3fdn_A Serine/threonine-protei 100.0 4.3E-36 1.5E-40  351.8  19.5  247 1334-1609    8-258 (279)
216 4aw2_A Serine/threonine-protei 100.0 6.6E-37 2.2E-41  379.8  13.2  211  734-947    64-283 (437)
217 2eue_A Carbon catabolite derep 100.0 3.1E-36 1.1E-40  352.2  18.1  246 1335-1609   13-263 (275)
218 2a19_B Interferon-induced, dou 100.0 1.6E-36 5.3E-41  356.1  15.5  250 1335-1619   11-278 (284)
219 4ejn_A RAC-alpha serine/threon 100.0 1.1E-36 3.7E-41  381.7  14.9  250 1334-1609  147-405 (446)
220 2y7j_A Phosphorylase B kinase  100.0 8.1E-36 2.8E-40  363.5  22.3  257 1328-1608   87-359 (365)
221 3q60_A ROP5B; pseudokinase, tr 100.0 8.7E-37   3E-41  373.2  13.7  264 1335-1619   62-365 (371)
222 2j7t_A Serine/threonine-protei 100.0 2.1E-36 7.1E-41  358.7  16.5  251 1335-1608   19-275 (302)
223 3uc3_A Serine/threonine-protei 100.0 3.4E-36 1.2E-40  366.1  18.7  253 1334-1609   19-275 (361)
224 3bhy_A Death-associated protei 100.0 5.1E-36 1.8E-40  351.8  19.6  257 1335-1615    5-274 (283)
225 1u46_A ACK-1, activated CDC42  100.0 1.3E-36 4.6E-41  358.1  14.6  258 1335-1616   18-285 (291)
226 2yex_A Serine/threonine-protei 100.0 3.4E-36 1.2E-40  351.8  17.9  251 1335-1608    7-261 (276)
227 2j0j_A Focal adhesion kinase 1 100.0 2.6E-36 8.8E-41  393.7  18.6  259 1333-1616  388-652 (656)
228 2yfx_A Tyrosine-protein kinase 100.0 2.4E-36   8E-41  362.7  16.8  258 1335-1616   30-305 (327)
229 3n9x_A Phosphotransferase; mal 100.0 1.1E-35 3.8E-40  370.6  23.3  199 1334-1537   25-253 (432)
230 2r5t_A Serine/threonine-protei 100.0 1.4E-36   5E-41  369.9  14.8  249 1335-1610   38-291 (373)
231 3nsz_A CK II alpha, casein kin 100.0 8.8E-36   3E-40  358.1  21.4  263 1335-1609   36-320 (330)
232 1t4h_A Serine/threonine-protei 100.0 1.1E-35 3.9E-40  350.3  21.6  246 1337-1609   28-283 (290)
233 3i6u_A CDS1, serine/threonine- 100.0 3.4E-36 1.2E-40  373.5  18.0  253 1333-1609  133-400 (419)
234 3fme_A Dual specificity mitoge 100.0 2.8E-36 9.6E-41  355.2  16.2  250 1334-1608    6-266 (290)
235 1vzo_A Ribosomal protein S6 ki 100.0 2.3E-36 7.8E-41  367.0  15.9  253 1335-1609   54-322 (355)
236 3dls_A PAS domain-containing s 100.0 1.3E-36 4.6E-41  365.9  13.5  241 1335-1609   24-275 (335)
237 3c4z_A Rhodopsin kinase; Ser/T 100.0 8.9E-36   3E-40  377.3  21.6  247 1335-1603  185-438 (543)
238 2rku_A Serine/threonine-protei 100.0 9.2E-36 3.1E-40  351.8  20.0  248 1335-1609   15-266 (294)
239 1x8b_A WEE1HU, WEE1-like prote 100.0 8.7E-36   3E-40  350.2  19.7  243 1335-1609   11-280 (289)
240 2qr7_A Ribosomal protein S6 ki 100.0 1.1E-36 3.8E-41  367.2  12.2  252 1334-1609   21-278 (342)
241 3an0_A Dual specificity mitoge 100.0 3.1E-36 1.1E-40  363.7  15.9  252 1333-1608   49-310 (340)
242 3rp9_A Mitogen-activated prote 100.0 1.3E-35 4.3E-40  373.5  20.8  194 1335-1533   53-281 (458)
243 2owb_A Serine/threonine-protei 100.0 1.1E-35 3.6E-40  358.3  19.2  248 1335-1609   41-292 (335)
244 1ua2_A CAK, cell division prot 100.0 4.6E-36 1.6E-40  363.2  16.1  271 1333-1609    8-292 (346)
245 2w5a_A Serine/threonine-protei 100.0 2.5E-36 8.5E-41  353.7  13.2  254 1335-1610    6-269 (279)
246 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-35 4.3E-40  352.3  19.2  248 1335-1609   22-271 (303)
247 2jam_A Calcium/calmodulin-depe 100.0 6.2E-36 2.1E-40  355.1  16.6  249 1335-1608    9-261 (304)
248 3eqc_A Dual specificity mitoge 100.0 4.1E-36 1.4E-40  365.7  15.1  266 1335-1609   33-325 (360)
249 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.7E-36 1.3E-40  361.4  14.4  268 1334-1608   33-318 (329)
250 2qkw_B Protein kinase; three-h 100.0 4.2E-36 1.4E-40  359.6  14.5  241  733-976    28-274 (321)
251 2vgo_A Serine/threonine-protei 100.0 2.1E-35 7.3E-40  346.8  20.2  246 1335-1609   14-263 (284)
252 3com_A Serine/threonine-protei 100.0 1.7E-35 5.9E-40  352.9  19.6  250 1334-1608   28-278 (314)
253 1cm8_A Phosphorylated MAP kina 100.0 1.2E-35 4.3E-40  362.0  18.8  263 1335-1609   25-308 (367)
254 2vwi_A Serine/threonine-protei 100.0   4E-36 1.4E-40  356.2  12.9  263 1332-1609   12-288 (303)
255 3q5i_A Protein kinase; CDPK, m 100.0 2.8E-35 9.4E-40  374.7  21.3  251 1334-1609   35-302 (504)
256 2h6d_A 5'-AMP-activated protei 100.0 2.8E-35 9.7E-40  344.1  19.8  247 1335-1609   11-262 (276)
257 3kvw_A DYRK2, dual specificity 100.0 3.1E-35 1.1E-39  365.9  21.3  196 1335-1539   97-302 (429)
258 3mi9_A Cell division protein k 100.0   2E-35 6.8E-40  358.3  19.1  270 1335-1609   17-312 (351)
259 2xrw_A Mitogen-activated prote 100.0   8E-35 2.7E-39  355.7  24.4  265 1335-1609   25-319 (371)
260 2r3i_A Cell division protein k 100.0 1.9E-35 6.5E-40  349.9  18.0  268 1335-1608    3-283 (299)
261 2ycf_A Serine/threonine-protei 100.0 2.3E-35 7.9E-40  353.3  18.6  250 1335-1608   10-274 (322)
262 2id5_A Lingo-1, leucine rich r 100.0 1.3E-34 4.5E-39  366.4  26.5  277   74-400     6-284 (477)
263 3eb0_A Putative uncharacterize 100.0 2.6E-35 8.9E-40  361.7  19.4  274 1331-1615    3-330 (383)
264 3qyz_A Mitogen-activated prote 100.0 6.1E-35 2.1E-39  355.9  22.4  267 1334-1608   26-313 (364)
265 4aaa_A Cyclin-dependent kinase 100.0 1.2E-35   4E-40  357.3  15.4  269 1335-1609   25-307 (331)
266 1phk_A Phosphorylase kinase; g 100.0 3.5E-35 1.2E-39  347.4  19.0  251 1334-1608   16-283 (298)
267 3lm5_A Serine/threonine-protei 100.0 9.3E-36 3.2E-40  357.5  14.3  253 1334-1609   27-288 (327)
268 3lij_A Calcium/calmodulin depe 100.0   2E-35 6.8E-40  375.1  18.1  249 1336-1609   38-292 (494)
269 2id5_A Lingo-1, leucine rich r 100.0 8.9E-35   3E-39  368.0  24.0  331  187-608    33-363 (477)
270 3pfq_A PKC-B, PKC-beta, protei 100.0 2.9E-35   1E-39  385.0  19.8  244 1333-1603  339-587 (674)
271 2vd5_A DMPK protein; serine/th 100.0 1.4E-35 4.8E-40  365.3  15.8  211  734-947    51-272 (412)
272 2b9h_A MAP kinase FUS3, mitoge 100.0 5.1E-35 1.7E-39  354.9  20.5  268 1334-1609   10-306 (353)
273 4exu_A Mitogen-activated prote 100.0 3.9E-35 1.3E-39  358.4  19.6  262 1335-1609   42-324 (371)
274 2x7f_A TRAF2 and NCK-interacti 100.0 1.1E-35 3.8E-40  356.6  14.2  261 1323-1608   12-286 (326)
275 3mwu_A Calmodulin-domain prote 100.0 2.5E-35 8.7E-40  373.4  18.1  250 1335-1609   22-277 (486)
276 2pml_X PFPK7, Ser/Thr protein  100.0 1.3E-35 4.6E-40  359.3  14.9  265 1334-1608   30-322 (348)
277 3s95_A LIMK-1, LIM domain kina 100.0 6.3E-35 2.1E-39  347.5  20.0  202  744-948    10-225 (310)
278 2fst_X Mitogen-activated prote 100.0   2E-35 6.9E-40  359.8  15.8  263 1335-1609   29-312 (367)
279 1wak_A Serine/threonine-protei 100.0 8.3E-35 2.8E-39  358.8  21.3  265 1335-1608   37-391 (397)
280 3nyv_A Calmodulin-domain prote 100.0 1.4E-35 4.8E-40  375.8  14.7  249 1335-1608   26-281 (484)
281 1zy4_A Serine/threonine-protei 100.0 2.9E-35   1E-39  348.4  16.0  251 1335-1609    6-284 (303)
282 3cek_A Dual specificity protei 100.0 1.3E-35 4.5E-40  353.9  12.9  258 1327-1609   20-293 (313)
283 2i6l_A Mitogen-activated prote 100.0 5.3E-35 1.8E-39  349.2  18.2  267 1335-1609   11-306 (320)
284 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.7E-36 9.4E-41  360.6   6.7  260 1332-1617   30-304 (319)
285 2wtk_C Serine/threonine-protei 100.0 2.1E-34   7E-39  342.0  22.8  249 1335-1609    5-264 (305)
286 3rgf_A Cyclin-dependent kinase 100.0 2.2E-35 7.5E-40  365.2  14.2  193 1340-1538   26-238 (405)
287 3v8s_A RHO-associated protein  100.0   3E-35   1E-39  362.1  15.0  207  736-947    61-275 (410)
288 4e7w_A Glycogen synthase kinas 100.0 8.1E-35 2.8E-39  358.3  18.6  264 1336-1609   41-322 (394)
289 1z57_A Dual specificity protei 100.0 2.4E-34 8.3E-39  346.3  22.3  265 1335-1609   14-329 (339)
290 2c30_A Serine/threonine-protei 100.0 1.3E-34 4.6E-39  346.4  19.3  210  732-947    23-243 (321)
291 1j1b_A Glycogen synthase kinas 100.0 1.1E-34 3.8E-39  360.0  19.1  262 1336-1609   55-337 (420)
292 1blx_A Cyclin-dependent kinase 100.0 6.1E-35 2.1E-39  350.0  15.9  269 1333-1608    9-296 (326)
293 3e3p_A Protein kinase, putativ 100.0 1.1E-34 3.6E-39  353.1  18.0  276 1328-1609   16-315 (360)
294 2vx3_A Dual specificity tyrosi 100.0 2.4E-34 8.2E-39  353.0  21.3  200 1333-1539   52-261 (382)
295 3fxz_A Serine/threonine-protei 100.0 2.2E-34 7.4E-39  340.7  20.1  199  743-947    19-218 (297)
296 3zgw_A Maternal embryonic leuc 100.0 1.2E-34   4E-39  349.5  17.6  203  741-947     7-212 (347)
297 3aln_A Dual specificity mitoge 100.0 4.3E-35 1.5E-39  351.7  13.6  254 1334-1609   21-286 (327)
298 1o6l_A RAC-beta serine/threoni 100.0 2.4E-34 8.2E-39  345.8  19.5  199  744-947     5-207 (337)
299 2rio_A Serine/threonine-protei 100.0 1.1E-34 3.9E-39  361.6  17.3  248 1337-1608   17-295 (434)
300 3fe3_A MAP/microtubule affinit 100.0 1.6E-34 5.4E-39  346.4  17.1  202  740-947    11-216 (328)
301 3o6n_A APL1; leucine-rich repe 100.0 1.2E-33 4.3E-38  347.7  25.2  309  110-529    42-352 (390)
302 2wei_A Calmodulin-domain prote 100.0 1.9E-34 6.6E-39  339.3  16.4  250 1335-1609   22-277 (287)
303 3fhr_A MAP kinase-activated pr 100.0 1.1E-34 3.9E-39  349.3  14.8  250 1335-1608   28-287 (336)
304 2dyl_A Dual specificity mitoge 100.0   1E-34 3.4E-39  346.8  14.1  252 1335-1609   25-284 (318)
305 3oja_B Anopheles plasmodium-re 100.0 1.2E-33   4E-38  367.4  25.0  242  111-400    49-290 (597)
306 2eu9_A Dual specificity protei 100.0 1.4E-33 4.8E-38  342.2  24.1  265 1335-1608   19-333 (355)
307 3coi_A Mitogen-activated prote 100.0 1.4E-34 4.8E-39  351.2  15.3  262 1335-1609   24-306 (353)
308 2psq_A Fibroblast growth facto 100.0 4.4E-34 1.5E-38  348.7  19.6  203  743-948    80-309 (370)
309 3p23_A Serine/threonine-protei 100.0 8.7E-35   3E-39  361.6  13.5  249 1334-1608   23-283 (432)
310 2nru_A Interleukin-1 receptor- 100.0 7.6E-34 2.6E-38  337.6  20.9  215  730-949    11-238 (307)
311 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.9E-34 6.6E-39  348.9  15.4  200  743-947    22-226 (353)
312 4eqm_A Protein kinase; transfe 100.0 3.4E-34 1.2E-38  338.5  16.7  202  743-948    10-215 (294)
313 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.2E-34 1.1E-38  349.7  16.7  201  741-947    62-287 (365)
314 4dc2_A Protein kinase C IOTA t 100.0   4E-34 1.4E-38  350.1  17.3  200  743-947    51-255 (396)
315 4hcu_A Tyrosine-protein kinase 100.0 3.2E-34 1.1E-38  334.0  15.6  200  744-947    10-210 (269)
316 1q8y_A SR protein kinase; tran 100.0 2.1E-34 7.1E-39  352.3  14.4  266 1335-1609   19-334 (373)
317 1xjd_A Protein kinase C, theta 100.0 6.7E-34 2.3E-38  342.8  18.4  202  741-947    14-220 (345)
318 1fot_A TPK1 delta, CAMP-depend 100.0 8.5E-34 2.9E-38  338.5  19.0  196  744-947     6-205 (318)
319 2iwi_A Serine/threonine-protei 100.0 4.5E-34 1.5E-38  340.4  16.5  243 1332-1609   28-284 (312)
320 3a99_A Proto-oncogene serine/t 100.0 2.5E-34 8.6E-39  344.0  13.8  242 1333-1609   41-294 (320)
321 3kul_A Ephrin type-A receptor  100.0 6.5E-34 2.2E-38  341.1  17.0  202  744-948    49-258 (325)
322 1tki_A Titin; serine kinase, m 100.0 7.8E-34 2.7E-38  339.6  17.2  200  742-947     3-205 (321)
323 3niz_A Rhodanese family protei 100.0 1.2E-33 4.1E-38  336.6  18.7  205  740-949    17-224 (311)
324 3a8x_A Protein kinase C IOTA t 100.0   1E-33 3.5E-38  341.8  18.3  199  744-947     9-212 (345)
325 3oja_B Anopheles plasmodium-re 100.0 1.5E-33   5E-38  366.4  21.1  336  209-668    50-385 (597)
326 2yab_A Death-associated protei 100.0 1.5E-33   5E-38  342.1  19.7  200  742-947    10-220 (361)
327 4fr4_A YANK1, serine/threonine 100.0 2.3E-33 7.8E-38  342.3  21.3  198  744-947    15-219 (384)
328 3cbl_A C-FES, proto-oncogene t 100.0   3E-34   1E-38  351.3  13.3  203  743-948   113-319 (377)
329 3p86_A Serine/threonine-protei 100.0 6.2E-34 2.1E-38  338.7  15.5  209  737-948    30-242 (309)
330 2qol_A Ephrin receptor; recept 100.0 6.8E-34 2.3E-38  347.3  15.6  202  744-948    45-254 (373)
331 2i0e_A Protein kinase C-beta I 100.0 1.1E-33 3.8E-38  342.0  17.1  200  743-947    19-223 (353)
332 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.2E-33 3.9E-38  329.0  16.5  201  743-947     7-208 (268)
333 3soc_A Activin receptor type-2 100.0 4.8E-34 1.6E-38  341.9  13.6  201  744-948    24-241 (322)
334 3tki_A Serine/threonine-protei 100.0 5.5E-34 1.9E-38  341.3  14.2  204  743-950     6-213 (323)
335 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.9E-33 6.4E-38  340.0  18.5  196  744-947    41-240 (350)
336 2x4f_A Myosin light chain kina 100.0 1.9E-33 6.4E-38  343.2  18.1  195  748-947    93-290 (373)
337 4fcg_A Uncharacterized protein 100.0 1.4E-33 4.8E-38  338.2  16.7  284   34-353    23-314 (328)
338 1kob_A Twitchin; kinase, intra 100.0 2.3E-33   8E-38  343.4  18.6  200  743-947    50-252 (387)
339 3a62_A Ribosomal protein S6 ki 100.0 1.6E-33 5.5E-38  337.9  16.6  200  743-947    16-223 (327)
340 3o6n_A APL1; leucine-rich repe 100.0 6.3E-33 2.2E-37  341.5  21.9  310  233-626    44-353 (390)
341 2y0a_A Death-associated protei 100.0 4.4E-33 1.5E-37  334.0  19.2  199  743-947    10-219 (326)
342 3p1a_A MYT1 kinase, membrane-a 100.0 1.6E-33 5.4E-38  335.6  14.9  196  744-946    57-256 (311)
343 2pzi_A Probable serine/threoni 100.0 2.1E-33 7.2E-38  370.0  17.7  241 1335-1616   80-329 (681)
344 3c0i_A Peripheral plasma membr 100.0 2.5E-33 8.5E-38  339.7  16.8  200  744-947    24-235 (351)
345 3vhe_A Vascular endothelial gr 100.0 1.5E-33 5.2E-38  342.8  15.0  213  733-948    11-299 (359)
346 2bdw_A Hypothetical protein K1 100.0   3E-33   1E-37  340.2  17.3  201  741-947    26-232 (362)
347 2izr_A Casein kinase I isoform 100.0 3.5E-33 1.2E-37  335.5  17.8  200  743-948     8-220 (330)
348 3q4u_A Activin receptor type-1 100.0 3.6E-33 1.2E-37  330.6  17.5  208  742-955     6-243 (301)
349 2r5t_A Serine/threonine-protei 100.0 2.2E-33 7.6E-38  341.8  15.9  199  744-947    38-241 (373)
350 3soa_A Calcium/calmodulin-depe 100.0 4.2E-33 1.5E-37  346.9  18.6  201  742-947     9-215 (444)
351 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.5E-33 1.2E-37  335.3  17.2  198  743-947     8-210 (336)
352 1ob3_A PFPK5, cell division co 100.0 2.5E-33 8.4E-38  330.1  15.5  200  744-948     2-204 (288)
353 2acx_A G protein-coupled recep 100.0 3.3E-33 1.1E-37  354.2  17.8  201  743-948   183-388 (576)
354 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.4E-33 1.8E-37  351.8  19.3  202  743-948   184-392 (543)
355 3dzo_A Rhoptry kinase domain;  100.0 1.2E-33 4.1E-38  350.0  13.0  248 1334-1616   77-373 (413)
356 3qa8_A MGC80376 protein; kinas 100.0 8.3E-34 2.8E-38  362.6  11.7  264 1335-1607   14-296 (676)
357 3op5_A Serine/threonine-protei 100.0 2.6E-33   9E-38  341.5  15.6  229  742-975    33-290 (364)
358 3ugc_A Tyrosine-protein kinase 100.0 1.8E-33 6.1E-38  332.4  13.6  201  744-947    10-219 (295)
359 3gen_A Tyrosine-protein kinase 100.0 2.1E-33   7E-38  329.7  14.0  202  743-948    23-225 (283)
360 3o0g_A Cell division protein k 100.0   1E-32 3.5E-37  325.4  19.9  199  744-947     2-204 (292)
361 3uqc_A Probable conserved tran 100.0 8.4E-33 2.9E-37  324.9  18.8  230 1335-1616   31-266 (286)
362 3qd2_B Eukaryotic translation  100.0 6.7E-33 2.3E-37  332.9  18.2  200  743-945     5-276 (332)
363 2eva_A TAK1 kinase - TAB1 chim 100.0 6.6E-33 2.3E-37  329.6  17.7  196  744-948     8-206 (307)
364 1opk_A P150, C-ABL, proto-onco 100.0 3.5E-33 1.2E-37  353.8  16.3  202  743-948   219-423 (495)
365 2pmi_A Negative RE, cyclin-dep 100.0 8.6E-33 2.9E-37  330.2  18.8  200  743-947     4-211 (317)
366 4euu_A Serine/threonine-protei 100.0 8.1E-33 2.8E-37  330.7  18.1  200  744-948     9-226 (319)
367 1qcf_A Haematopoetic cell kina 100.0   2E-33 6.7E-38  352.7  12.8  202  742-948   186-389 (454)
368 3tt0_A Basic fibroblast growth 100.0 8.4E-33 2.9E-37  339.2  18.0  202  743-947    68-296 (382)
369 3l9p_A Anaplastic lymphoma kin 100.0 3.3E-33 1.1E-37  340.6  14.3  201  744-947    71-289 (367)
370 2w4o_A Calcium/calmodulin-depe 100.0 6.3E-33 2.2E-37  335.8  16.6  200  741-948    50-253 (349)
371 4ejn_A RAC-alpha serine/threon 100.0 2.3E-33 7.8E-38  351.5  12.8  201  743-947   147-351 (446)
372 3t9t_A Tyrosine-protein kinase 100.0 4.5E-33 1.5E-37  323.6  14.2  200  744-947     8-208 (267)
373 1ogq_A PGIP-2, polygalacturona 100.0 5.5E-33 1.9E-37  331.0  15.2  251  316-626    51-306 (313)
374 3poz_A Epidermal growth factor 100.0 4.8E-33 1.6E-37  333.9  14.5  201  744-948    15-223 (327)
375 2zv2_A Calcium/calmodulin-depe 100.0 7.8E-33 2.7E-37  327.5  16.0  199  743-947    12-242 (298)
376 1k9a_A Carboxyl-terminal SRC k 100.0 1.3E-32 4.4E-37  344.6  18.7  197  743-949   192-391 (450)
377 3ork_A Serine/threonine protei 100.0 2.2E-33 7.4E-38  334.4  11.0  202  742-947    10-221 (311)
378 1mp8_A Focal adhesion kinase 1 100.0 6.3E-33 2.2E-37  325.3  14.4  202  743-948    14-221 (281)
379 1luf_A Muscle-specific tyrosin 100.0 5.6E-33 1.9E-37  335.5  14.1  206  739-947    42-279 (343)
380 3kn6_A Ribosomal protein S6 ki 100.0 2.3E-32 7.8E-37  327.6  19.2  192  749-948    16-212 (325)
381 1vzo_A Ribosomal protein S6 ki 100.0 4.7E-33 1.6E-37  337.8  13.4  200  744-947    54-264 (355)
382 3llt_A Serine/threonine kinase 100.0 1.5E-32 5.2E-37  334.2  17.6  209  730-947    21-261 (360)
383 2y94_A 5'-AMP-activated protei 100.0 1.7E-32 5.8E-37  343.6  18.4  199  743-947    15-218 (476)
384 1u5q_A Serine/threonine protei 100.0 1.1E-32 3.6E-37  333.5  15.9  195  744-947    54-255 (348)
385 3uc3_A Serine/threonine-protei 100.0 1.6E-32 5.5E-37  333.7  17.6  199  743-948    19-221 (361)
386 3dbq_A Dual specificity protei 100.0 5.8E-33   2E-37  335.5  13.5  200  743-948     8-223 (343)
387 3gni_B Strad alpha; kinase fol 100.0 2.8E-32 9.5E-37  335.6  19.5  203  743-948    24-240 (389)
388 3lb7_A RAF proto-oncogene seri 100.0 1.4E-32 4.7E-37  326.8  16.2  200  743-948    35-240 (307)
389 3cok_A Serine/threonine-protei 100.0   2E-32 6.9E-37  320.4  17.3  201  743-947    10-214 (278)
390 3cc6_A Protein tyrosine kinase 100.0 2.1E-32   7E-37  320.9  17.4  202  743-948    11-218 (281)
391 3pfq_A PKC-B, PKC-beta, protei 100.0 2.3E-32 7.8E-37  357.6  19.6  200  743-947   340-544 (674)
392 4f0f_A Serine/threonine-protei 100.0 4.3E-32 1.5E-36  319.2  20.0  200  743-949    18-232 (287)
393 3f3z_A Calcium/calmodulin-depe 100.0 2.9E-32   1E-36  318.8  18.3  200  742-948     7-210 (277)
394 3kex_A Receptor tyrosine-prote 100.0 1.3E-32 4.3E-37  330.0  15.4  201  744-948    13-221 (325)
395 3oz6_A Mitogen-activated prote 100.0 2.6E-32 8.9E-37  335.7  18.4  201  741-947     6-233 (388)
396 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 6.9E-33 2.4E-37  347.3  13.3  201  743-948   183-385 (452)
397 3dls_A PAS domain-containing s 100.0 1.3E-32 4.3E-37  331.2  14.9  200  742-947    22-232 (335)
398 2zmd_A Dual specificity protei 100.0 1.2E-32 4.1E-37  338.4  15.0  199  744-948    56-270 (390)
399 3m2w_A MAP kinase-activated pr 100.0 3.3E-32 1.1E-36  322.3  18.2  229 1336-1609   18-257 (299)
400 1csn_A Casein kinase-1; phosph 100.0 3.7E-32 1.3E-36  321.4  18.6  200  743-948     9-221 (298)
401 1rjb_A FL cytokine receptor; k 100.0 1.9E-32 6.4E-37  331.1  16.3  204  742-948    43-278 (344)
402 1nxk_A MAP kinase-activated pr 100.0 3.1E-32   1E-36  335.7  18.3  195  744-948    61-266 (400)
403 3hko_A Calcium/calmodulin-depe 100.0 1.5E-32   5E-37  332.2  15.0  207  739-948    21-279 (345)
404 3dtc_A Mitogen-activated prote 100.0 1.6E-32 5.6E-37  319.8  14.5  198  744-947     7-216 (271)
405 2a2a_A Death-associated protei 100.0 3.7E-32 1.2E-36  325.4  17.9  199  743-947    11-220 (321)
406 3g33_A Cell division protein k 100.0 4.2E-32 1.4E-36  322.8  18.1  200  742-947     7-221 (308)
407 4fvq_A Tyrosine-protein kinase 100.0 1.5E-32 5.3E-37  323.2  14.1  194  744-945     8-218 (289)
408 2ivs_A Proto-oncogene tyrosine 100.0 1.5E-32   5E-37  327.4  13.8  203  743-948    22-256 (314)
409 3mtl_A Cell division protein k 100.0 1.5E-32   5E-37  329.2  13.9  200  744-948     2-204 (324)
410 2pvf_A Fibroblast growth facto 100.0 4.7E-32 1.6E-36  326.3  18.3  202  743-947    34-262 (334)
411 1t46_A HOMO sapiens V-KIT hard 100.0   3E-32   1E-36  324.6  16.2  203  743-948    22-251 (313)
412 3mdy_A Bone morphogenetic prot 100.0 7.6E-32 2.6E-36  324.6  19.8  211  737-953    30-270 (337)
413 2h34_A Serine/threonine-protei 100.0 4.8E-32 1.6E-36  322.5  17.4  201  743-947    33-237 (309)
414 3ttj_A Mitogen-activated prote 100.0 3.3E-32 1.1E-36  341.6  16.8  197  742-947    60-265 (464)
415 3kfa_A Tyrosine-protein kinase 100.0 1.6E-32 5.6E-37  322.8  13.0  204  741-948    10-216 (288)
416 3qup_A Tyrosine-protein kinase 100.0 1.6E-32 5.3E-37  328.8  12.8  207  739-948    18-243 (323)
417 3kk8_A Calcium/calmodulin depe 100.0 9.2E-32 3.2E-36  315.7  19.2  200  742-947     4-209 (284)
418 3pg1_A Mitogen-activated prote 100.0   5E-32 1.7E-36  329.9  17.5  209  733-947    11-236 (362)
419 3c1x_A Hepatocyte growth facto 100.0 3.5E-32 1.2E-36  331.8  16.1  200  746-948    91-300 (373)
420 2ozo_A Tyrosine-protein kinase 100.0 2.5E-32 8.6E-37  354.0  15.6  194  751-948   343-543 (613)
421 3rp9_A Mitogen-activated prote 100.0 4.2E-32 1.4E-36  341.4  17.0  197  743-944    52-283 (458)
422 2ac3_A MAP kinase-interacting  100.0 3.6E-32 1.2E-36  324.5  15.5  201  744-948    12-229 (316)
423 2buj_A Serine/threonine-protei 100.0   3E-32   1E-36  325.3  14.9  201  744-947    29-248 (317)
424 2yex_A Serine/threonine-protei 100.0   5E-32 1.7E-36  316.5  16.2  212  743-958     6-221 (276)
425 4e5w_A Tyrosine-protein kinase 100.0 2.7E-32 9.3E-37  323.2  14.2  200  744-946    21-230 (302)
426 2y7j_A Phosphorylase B kinase  100.0 8.1E-32 2.8E-36  328.2  18.6  205  737-947    87-307 (365)
427 4fmz_A Internalin; leucine ric 100.0 4.3E-31 1.5E-35  319.7  24.8  305  134-552    41-345 (347)
428 2eue_A Carbon catabolite derep 100.0 6.9E-32 2.4E-36  315.4  17.2  198  743-947    12-214 (275)
429 1qpc_A LCK kinase; alpha beta  100.0   2E-32 6.7E-37  320.6  12.6  201  742-947    11-213 (279)
430 3kmu_A ILK, integrin-linked ki 100.0 3.5E-32 1.2E-36  316.6  14.6  197  744-948    10-214 (271)
431 3lxl_A Tyrosine-protein kinase 100.0 2.8E-32 9.7E-37  327.2  14.2  201  744-947    23-232 (327)
432 3fdn_A Serine/threonine-protei 100.0   7E-32 2.4E-36  316.0  17.1  199  742-947     7-209 (279)
433 3is5_A Calcium-dependent prote 100.0 6.2E-32 2.1E-36  317.6  16.6  198  744-947    22-227 (285)
434 3n9x_A Phosphotransferase; mal 100.0 6.6E-32 2.2E-36  336.6  17.7  200  742-946    24-253 (432)
435 2i1m_A Macrophage colony-stimu 100.0 3.9E-32 1.3E-36  326.8  15.0  206  740-948    42-270 (333)
436 2rku_A Serine/threonine-protei 100.0 1.3E-31 4.6E-36  316.2  19.1  199  744-947    15-217 (294)
437 2qr7_A Ribosomal protein S6 ki 100.0 2.2E-32 7.4E-37  329.8  12.4  197  742-947    20-222 (342)
438 4agu_A Cyclin-dependent kinase 100.0 8.4E-32 2.9E-36  320.5  17.3  200  744-948     3-206 (311)
439 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.3E-32 1.1E-36  327.0  13.9  200  742-947    32-240 (329)
440 3byv_A Rhoptry kinase; malaria 100.0 9.4E-33 3.2E-37  338.2   9.3  196  743-947    72-315 (377)
441 3bhy_A Death-associated protei 100.0 1.2E-31 4.2E-36  314.5  18.4  198  744-947     5-213 (283)
442 2v62_A Serine/threonine-protei 100.0 3.1E-32 1.1E-36  329.4  13.7  200  744-948    37-263 (345)
443 3i6u_A CDS1, serine/threonine- 100.0 5.7E-32 1.9E-36  335.6  16.3  200  742-948   133-347 (419)
444 1mqb_A Ephrin type-A receptor  100.0 9.6E-32 3.3E-36  323.4  17.7  201  745-948    45-254 (333)
445 4fmz_A Internalin; leucine ric 100.0 8.3E-31 2.8E-35  317.1  26.1  128  465-600   218-345 (347)
446 2xir_A Vascular endothelial gr 100.0 6.1E-32 2.1E-36  322.3  15.6  212  734-948    17-254 (316)
447 3og7_A AKAP9-BRAF fusion prote 100.0 4.1E-32 1.4E-36  319.8  13.8  200  743-948    23-228 (289)
448 1b6c_B TGF-B superfamily recep 100.0 1.2E-31 4.2E-36  323.6  18.3  214  740-959    38-281 (342)
449 2h8h_A Proto-oncogene tyrosine 100.0 1.6E-32 5.3E-37  351.0  10.9  201  743-948   266-468 (535)
450 3mi9_A Cell division protein k 100.0 1.2E-31 4.2E-36  325.0  18.2  201  743-947    16-231 (351)
451 2owb_A Serine/threonine-protei 100.0 1.3E-31 4.3E-36  322.7  18.1  199  744-947    41-243 (335)
452 2clq_A Mitogen-activated prote 100.0 1.2E-31 4.1E-36  316.5  17.5  200  744-947    22-227 (295)
453 1p4o_A Insulin-like growth fac 100.0 2.9E-32 9.9E-37  326.2  12.3  211  734-947    15-243 (322)
454 2vuw_A Serine/threonine-protei 100.0 1.1E-32 3.9E-37  332.0   8.8  241 1335-1607   20-329 (336)
455 2jam_A Calcium/calmodulin-depe 100.0 9.8E-32 3.3E-36  319.0  16.6  198  743-947     8-209 (304)
456 1cm8_A Phosphorylated MAP kina 100.0 8.1E-32 2.8E-36  328.3  16.1  196  742-947    23-228 (367)
457 1ua2_A CAK, cell division prot 100.0 7.3E-32 2.5E-36  326.3  15.6  202  741-947     7-215 (346)
458 2wqm_A Serine/threonine-protei 100.0 1.8E-31   6E-36  317.7  18.5  201  743-947    31-238 (310)
459 1u59_A Tyrosine-protein kinase 100.0 8.7E-32   3E-36  316.6  15.6  201  744-948     9-217 (287)
460 3lzb_A Epidermal growth factor 100.0 9.5E-32 3.2E-36  322.6  16.2  201  744-948    15-223 (327)
461 3g2f_A Bone morphogenetic prot 100.0   4E-32 1.4E-36  327.1  12.9  198  743-946    12-236 (336)
462 4eut_A Serine/threonine-protei 100.0 3.9E-32 1.3E-36  334.9  13.0  200  744-948     9-226 (396)
463 3eqc_A Dual specificity mitoge 100.0 5.3E-32 1.8E-36  329.4  14.0  199  743-947    32-232 (360)
464 3gxj_A TGF-beta receptor type- 100.0 3.9E-33 1.3E-37  330.4   3.6  193  743-941     2-214 (303)
465 4hgt_A Casein kinase I isoform 100.0 1.8E-31 6.3E-36  314.9  17.7  202  742-949     7-219 (296)
466 2vgo_A Serine/threonine-protei 100.0   2E-31   7E-36  312.9  17.6  197  744-947    14-214 (284)
467 2j7t_A Serine/threonine-protei 100.0   7E-32 2.4E-36  319.7  13.7  203  742-948    17-225 (302)
468 3q60_A ROP5B; pseudokinase, tr 100.0 4.8E-32 1.6E-36  331.2  12.4  197  744-948    62-296 (371)
469 3pls_A Macrophage-stimulating  100.0 1.9E-31 6.6E-36  315.2  17.2  198  746-946    23-229 (298)
470 2ft3_A Biglycan; proteoglycan, 100.0 5.5E-31 1.9E-35  316.7  21.5  218  138-400    34-253 (332)
471 1t4h_A Serine/threonine-protei 100.0 2.7E-31 9.2E-36  312.9  18.2  197  746-948    28-232 (290)
472 3a7i_A MST3 kinase, serine/thr 100.0 3.4E-31 1.2E-35  314.1  19.2  199  744-948    22-222 (303)
473 2jii_A Serine/threonine-protei 100.0 5.3E-32 1.8E-36  328.4  12.5  197  744-949    42-272 (352)
474 3com_A Serine/threonine-protei 100.0 3.1E-31 1.1E-35  316.1  18.7  200  742-947    27-227 (314)
475 2w5a_A Serine/threonine-protei 100.0 7.1E-32 2.4E-36  315.8  12.9  205  743-948     5-219 (279)
476 4fl3_A Tyrosine-protein kinase 100.0   1E-31 3.6E-36  349.0  15.7  194  750-948   375-576 (635)
477 3lij_A Calcium/calmodulin depe 100.0   2E-31 6.8E-36  338.2  17.9  198  743-947    36-239 (494)
478 2ft3_A Biglycan; proteoglycan, 100.0 1.7E-30 5.8E-35  312.4  25.0  291   75-399    31-331 (332)
479 1x8b_A WEE1HU, WEE1-like prote 100.0 2.3E-31 7.8E-36  312.5  17.0  197  742-946     9-232 (289)
480 3uzp_A CKI-delta, CKID, casein 100.0 2.3E-31 7.8E-36  314.3  17.0  201  742-948     7-218 (296)
481 3mwu_A Calmodulin-domain prote 100.0   2E-31 6.7E-36  337.7  17.6  198  743-947    21-224 (486)
482 2w1i_A JAK2; chromosomal rearr 100.0   1E-31 3.6E-36  322.2  14.2  200  744-946    41-249 (326)
483 3q5i_A Protein kinase; CDPK, m 100.0 3.3E-31 1.1E-35  337.2  19.6  199  742-947    34-249 (504)
484 4aaa_A Cyclin-dependent kinase 100.0   2E-31 6.7E-36  320.5  16.5  200  744-948    25-228 (331)
485 2x7f_A TRAF2 and NCK-interacti 100.0 1.1E-31 3.8E-36  321.8  14.1  212  732-948    12-237 (326)
486 3eb0_A Putative uncharacterize 100.0 2.5E-31 8.5E-36  326.3  17.4  198  740-947     3-244 (383)
487 3fme_A Dual specificity mitoge 100.0 1.4E-31 4.8E-36  315.1  14.6  200  743-947     6-215 (290)
488 3an0_A Dual specificity mitoge 100.0 1.4E-31 4.9E-36  322.9  14.9  202  741-947    48-259 (340)
489 2a19_B Interferon-induced, dou 100.0 1.8E-31 6.1E-36  313.0  15.3  195  743-946    10-222 (284)
490 3nyv_A Calmodulin-domain prote 100.0 1.3E-31 4.4E-36  339.4  15.0  198  743-947    25-229 (484)
491 2h6d_A 5'-AMP-activated protei 100.0 3.1E-31 1.1E-35  309.8  17.0  199  743-947    10-213 (276)
492 3f66_A Hepatocyte growth facto 100.0 3.1E-31 1.1E-35  313.6  17.0  201  744-947    25-235 (298)
493 1xku_A Decorin; proteoglycan,  100.0 2.4E-30 8.1E-35  310.9  24.8  222  138-401    32-253 (330)
494 3ll6_A Cyclin G-associated kin 100.0 2.9E-31 9.9E-36  319.3  16.6  203  743-947    27-255 (337)
495 3lxp_A Non-receptor tyrosine-p 100.0 2.2E-31 7.6E-36  318.1  15.3  196  747-947    34-239 (318)
496 2r3i_A Cell division protein k 100.0 3.3E-31 1.1E-35  313.5  16.4  199  744-947     3-206 (299)
497 2xrw_A Mitogen-activated prote 100.0 3.9E-31 1.3E-35  323.0  17.5  196  743-947    24-228 (371)
498 3nsz_A CK II alpha, casein kin 100.0   5E-31 1.7E-35  316.7  18.0  192  744-947    36-233 (330)
499 3lm5_A Serine/threonine-protei 100.0   2E-31   7E-36  319.7  14.6  209  734-947    18-235 (327)
500 3brb_A Proto-oncogene tyrosine 100.0   2E-31 6.8E-36  317.7  14.2  205  741-948    31-253 (313)

No 1  
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00  E-value=8.3e-87  Score=891.96  Aligned_cols=542  Identities=29%  Similarity=0.418  Sum_probs=481.5

Q ss_pred             cccCChhhHHHHHHHHHHhccCCccccccCCCCCCCCCCCCCCCCccceeeEecCCCCcEEEEecCCCCCCcc---CCcc
Q 047591           32 TEANITTDEAALLQVKAHIALDPQNFFERNWNLSATTNTSSSNSVCNWVGVTCGSRHGRVTDLSIPNLGLGGT---IPPH  108 (1624)
Q Consensus        32 ~~~~~~~d~~aLl~~k~~~~~~p~~~~~~~W~~~~~~~~~~~~~~C~W~Gv~C~~~~~~v~~l~l~~~~l~g~---ip~~  108 (1624)
                      +.++.++|++|||+||+++. ||. .+ ++|+        .+++||.|.||+|+  ++||+.|+|++.++.|.   +|++
T Consensus         6 ~~~~~~~~~~all~~k~~~~-~~~-~l-~~W~--------~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~   72 (768)
T 3rgz_A            6 PSQSLYREIHQLISFKDVLP-DKN-LL-PDWS--------SNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSS   72 (768)
T ss_dssp             --CCHHHHHHHHHHHHTTCS-CTT-SS-TTCC--------TTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHhhCC-Ccc-cc-cCCC--------CCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChh
Confidence            33456889999999999996 887 44 6896        24589999999998  69999999999999999   9999


Q ss_pred             ccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccch-hhhccCCCcCEEEccCCcccccCCccc-cCCC
Q 047591          109 VANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFD-DMCNSLTELESFDVSSNQITGQLPSSL-GDCS  186 (1624)
Q Consensus       109 i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~-~~~~~l~~L~~L~Ls~N~l~g~iP~~l-~~l~  186 (1624)
                      +++|++|+.++++.|.+. .+|..++.+++|++|||++|.++|.+|. ..++++++|++|+|++|++++.+|..+ ++++
T Consensus        73 l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~  151 (768)
T 3rgz_A           73 LLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLN  151 (768)
T ss_dssp             TTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCT
T ss_pred             HhccCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCC
Confidence            999999999999999886 5789999999999999999999998876 145789999999999999999999887 8999


Q ss_pred             cccccccccccccccccCc---ccccccccceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcE
Q 047591          187 KLKRLSVSFNELTGRIPQN---IGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQE  263 (1624)
Q Consensus       187 ~L~~L~Ls~N~l~g~ip~~---~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~  263 (1624)
                      +|++|||++|++++.+|..   ++++++|++|+|++|++++.+|.  .++++|++|+|++|++++.+|.  ++.+++|++
T Consensus       152 ~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~--l~~l~~L~~  227 (768)
T 3rgz_A          152 SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF--LGDCSALQH  227 (768)
T ss_dssp             TCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB--CTTCCSCCE
T ss_pred             CCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc--cccCCCCCE
Confidence            9999999999999998887   88999999999999999987765  7899999999999999988876  678999999


Q ss_pred             eecccccccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCcc
Q 047591          264 LNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLL  343 (1624)
Q Consensus       264 L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~  343 (1624)
                      |+|++|++++.+|..++++++|++|+|++|+        ++|.+|..  .+++|++|+|++|+++|.+|..++..+++|+
T Consensus       228 L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~--------l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~  297 (768)
T 3rgz_A          228 LDISGNKLSGDFSRAISTCTELKLLNISSNQ--------FVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLT  297 (768)
T ss_dssp             EECCSSCCCSCHHHHTTTCSSCCEEECCSSC--------CEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCS
T ss_pred             EECcCCcCCCcccHHHhcCCCCCEEECCCCc--------ccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCC
Confidence            9999999999999999999999999988775        44566664  7788899999999998888888875568889


Q ss_pred             EEEecCCccCCcCcccccCCCCCcEEecCCccccccCccc-ccccccccEEEccccccccCCCCCCcccccccccccccc
Q 047591          344 RLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANT-FGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLR  422 (1624)
Q Consensus       344 ~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~-f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~  422 (1624)
                      +|+|++|++++.+|..|+++++|++|+|++|+++|.+|.. |+++++|++|+|++|++.                     
T Consensus       298 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~---------------------  356 (768)
T 3rgz_A          298 GLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFS---------------------  356 (768)
T ss_dssp             EEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEE---------------------
T ss_pred             EEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccC---------------------
Confidence            9999999888888888888888999999988888777755 788888888777777664                     


Q ss_pred             eeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCC--CCcccEEeccCCccCCCccchhccccccceeccc
Q 047591          423 YLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGN--LSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLS  500 (1624)
Q Consensus       423 ~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~--l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls  500 (1624)
                                |.+|..+.++..+|++|++++|++.|.+|..+..  +++|++|+|++|++++.+|..++.+++|++|+|+
T Consensus       357 ----------~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls  426 (768)
T 3rgz_A          357 ----------GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS  426 (768)
T ss_dssp             ----------ECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECC
T ss_pred             ----------ccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECc
Confidence                      4455555555546777777777777777777776  8899999999999999999999999999999999


Q ss_pred             ccccccCCCccccCCCCCceeecccccccCCCccccccccCCccccccCccccccCchhhccccccceeecccccccCCC
Q 047591          501 YNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCL  580 (1624)
Q Consensus       501 ~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~i  580 (1624)
                      +|+++|.+|..++++++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+..+++|+.|||++|+++|.+
T Consensus       427 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~  506 (768)
T 3rgz_A          427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI  506 (768)
T ss_dssp             SSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred             CCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccccccceeeccCCcCCCCccccccCCccccccccccCCCCCCCchhh
Q 047591          581 PQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAI  632 (1624)
Q Consensus       581 P~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~iP~~~  632 (1624)
                      |.+++.+++|+.|+|++|+++|.+|..++++++|+.|++++|+++|.+|..+
T Consensus       507 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~  558 (768)
T 3rgz_A          507 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM  558 (768)
T ss_dssp             CGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGG
T ss_pred             ChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHH
Confidence            9999999999999999999999999999999999999999999999999764


No 2  
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00  E-value=9.4e-73  Score=756.06  Aligned_cols=564  Identities=33%  Similarity=0.486  Sum_probs=381.1

Q ss_pred             CcEEEEecCCCCCCccCCc--cccCCCcccEEEecCCCccccCCccc-CCCCCCcEEEccCCCCCCccchhh--hccCCC
Q 047591           89 GRVTDLSIPNLGLGGTIPP--HVANLSFLVSLNISGNRFHGTLPNEL-WLMPRLRIIDLSSNRISGNLFDDM--CNSLTE  163 (1624)
Q Consensus        89 ~~v~~l~l~~~~l~g~ip~--~i~~L~~L~~L~Ls~N~l~g~iP~~~-~~l~~L~~L~Ls~N~l~g~~~~~~--~~~l~~  163 (1624)
                      .+++.|+|+++.+.|.+|+  .+++|++|++|+|++|.+++.+|..+ +.+++|++|||++|++++..|..+  +.++++
T Consensus       100 ~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~  179 (768)
T 3rgz_A          100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE  179 (768)
T ss_dssp             TTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTT
T ss_pred             CCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCC
Confidence            4567778888888888877  78888888888888888887777766 677888888888888776555442  456666


Q ss_pred             cCEEEccCCcccccCCccccCCCcccccccccccccccccCcccccccccceeccCCcCCCCCCCcccccCccchheecc
Q 047591          164 LESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLAN  243 (1624)
Q Consensus       164 L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~  243 (1624)
                      |++|++++|++++.+|.  +.+++|++|+|++|++++.+|. ++++++|++|+|++|+++|.+|..++++++|++|+|++
T Consensus       180 L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~  256 (768)
T 3rgz_A          180 LKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS  256 (768)
T ss_dssp             CCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCS
T ss_pred             CCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCC
Confidence            77777777766665543  5667777777777777766665 77777777777777777777777777777777777777


Q ss_pred             ccccCCCCccccccCCCCcEeecccccccCcCCcccccc-CcCCeeeccCCcccccCccccccccccccccCCCccEEEe
Q 047591          244 NSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNC-TLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQL  322 (1624)
Q Consensus       244 N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l-~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~L  322 (1624)
                      |+++|.+|..   .+++|++|+|++|+++|.+|..++.+ ++|++|+|++|+        ++|.+|..+.++++|++|+|
T Consensus       257 n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~--------l~~~~p~~~~~l~~L~~L~L  325 (768)
T 3rgz_A          257 NQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNH--------FYGAVPPFFGSCSLLESLAL  325 (768)
T ss_dssp             SCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSE--------EEECCCGGGGGCTTCCEEEC
T ss_pred             CcccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCc--------CCCccchHHhcCCCccEEEC
Confidence            7776666653   56667777777777777777666654 677777666654        33445555555555555555


Q ss_pred             ecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCC-CCcEEecCCccccccCcccccc--cccccEEEccccc
Q 047591          323 YGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNAS-KLTVLELSRNLFSGLVANTFGN--CRQLQILNLAYSQ  399 (1624)
Q Consensus       323 s~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-~L~~L~Ls~N~l~g~~~~~f~~--l~~L~~L~L~~N~  399 (1624)
                      ++|+++|.+|......+++|++|+|++|+++|.+|..+.++. +|++|+|++|+++|.+|..+..  +++|++|+|++|+
T Consensus       326 ~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~  405 (768)
T 3rgz_A          326 SSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNG  405 (768)
T ss_dssp             CSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSE
T ss_pred             CCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCc
Confidence            555555555554333455555555555555555555555554 5555555555555555554444  4555555555555


Q ss_pred             cccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEeccCCc
Q 047591          400 LATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQ  479 (1624)
Q Consensus       400 l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~  479 (1624)
                      ++.       ..+..+.++++|++|++++|.+++.+|..++++. +|++|++++|.+.|.+|..|+.+++|++|+|++|+
T Consensus       406 l~~-------~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~  477 (768)
T 3rgz_A          406 FTG-------KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND  477 (768)
T ss_dssp             EEE-------ECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred             ccc-------ccCHHHhcCCCCCEEECcCCcccCcccHHHhcCC-CCCEEECCCCcccCcCCHHHcCCCCceEEEecCCc
Confidence            532       1233444555555555555555555555555554 45555555555555555555555555555555555


Q ss_pred             cCCCccchhccccccceecccccccccCCCccccCCCCCceeecccccccCCCccccccccCCccccccCccccccCc--
Q 047591          480 LASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLNSTIP--  557 (1624)
Q Consensus       480 l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP--  557 (1624)
                      ++|.+|.+++.+++|++|+|++|+++|.+|.+++++++|++|+|++|+++|.+|..++++++|+.|+|++|+++|.+|  
T Consensus       478 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~  557 (768)
T 3rgz_A          478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA  557 (768)
T ss_dssp             CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGG
T ss_pred             ccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChH
Confidence            555555555555555555555555555555555555555555555555555555555555555555555555555555  


Q ss_pred             --------------------------------------------------------------------hhhcccccccee
Q 047591          558 --------------------------------------------------------------------STFWSLEYILVV  569 (1624)
Q Consensus       558 --------------------------------------------------------------------~~~~~l~~L~~l  569 (1624)
                                                                                          ..++.+.+|+.|
T Consensus       558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~L  637 (768)
T 3rgz_A          558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL  637 (768)
T ss_dssp             GGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEE
T ss_pred             HhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEE
Confidence                                                                                445556788999


Q ss_pred             ecccccccCCCCcccccccccceeeccCCcCCCCccccccCCccccccccccCCCCCCCchhhhccccccC---------
Q 047591          570 DFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAIGSLISLEK---------  640 (1624)
Q Consensus       570 dLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~iP~~~~~l~~L~~---------  640 (1624)
                      ||++|+++|.||.++++++.|+.|+|++|+++|.||.+++++++|+.|||++|+++|.||..++++++|+.         
T Consensus       638 dLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~  717 (768)
T 3rgz_A          638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS  717 (768)
T ss_dssp             ECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred             ECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999988873         


Q ss_pred             CCCCCCCCccccCCccccccccccccccccccccccc
Q 047591          641 GEIPSGGPFVNFTEGSFMQNYALCGSLRLQVQACETS  677 (1624)
Q Consensus       641 ~~i~~~~~~~~~~~~~~~~n~~lcg~~~~~l~~c~~~  677 (1624)
                      |.||.+++|.+|+..+|.||++|||+++.   +|...
T Consensus       718 g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~---~C~~~  751 (768)
T 3rgz_A          718 GPIPEMGQFETFPPAKFLNNPGLCGYPLP---RCDPS  751 (768)
T ss_dssp             EECCSSSSGGGSCGGGGCSCTEEESTTSC---CCCSC
T ss_pred             ccCCCchhhccCCHHHhcCCchhcCCCCc---CCCCC
Confidence            78899999999999999999999998753   78654


No 3  
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00  E-value=2.9e-59  Score=611.58  Aligned_cols=500  Identities=21%  Similarity=0.317  Sum_probs=284.7

Q ss_pred             hhhHHHHHHHHHHhccCCccccccCCCCCC-----CCCCCCCCCCccc---eeeEecCCCCcEEEEecCCCCCCccCCcc
Q 047591           37 TTDEAALLQVKAHIALDPQNFFERNWNLSA-----TTNTSSSNSVCNW---VGVTCGSRHGRVTDLSIPNLGLGGTIPPH  108 (1624)
Q Consensus        37 ~~d~~aLl~~k~~~~~~p~~~~~~~W~~~~-----~~~~~~~~~~C~W---~Gv~C~~~~~~v~~l~l~~~~l~g~ip~~  108 (1624)
                      ..|++||.+||+++..+       +|+.+.     ...|..+.+||.|   .||+|+.. |||++|+|+++++.|++|++
T Consensus        29 ~~d~~aL~~~~~~~~~~-------~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~  100 (636)
T 4eco_A           29 IKDYLALKEIWDALNGK-------NWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDA  100 (636)
T ss_dssp             HHHHHHHHHHHHHTTGG-------GCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGG
T ss_pred             HHHHHHHHHHHHHcCCC-------CcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChH
Confidence            56899999999998533       333211     1133346799999   99999865 89999999999999999999


Q ss_pred             ccCCCcccEEEecCCCc------cc------cCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccc
Q 047591          109 VANLSFLVSLNISGNRF------HG------TLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITG  176 (1624)
Q Consensus       109 i~~L~~L~~L~Ls~N~l------~g------~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g  176 (1624)
                      |++|++|++|+|++|++      .|      .+|.+.  +.+|+ ++++.|.+.+.+|..+...+..+..+++....+..
T Consensus       101 l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~  177 (636)
T 4eco_A          101 IGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK  177 (636)
T ss_dssp             GGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC
T ss_pred             HhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc
Confidence            99999999999999987      34      555555  56677 88888888887766554333333334443222211


Q ss_pred             cCCccccCCCcccccccc--cccccccccCcccccccccceeccCCcCCCC-----------------CCCccc--ccCc
Q 047591          177 QLPSSLGDCSKLKRLSVS--FNELTGRIPQNIGNLTELMELYLNGNNLQGE-----------------FPPTIF--NVSS  235 (1624)
Q Consensus       177 ~iP~~l~~l~~L~~L~Ls--~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~  235 (1624)
                            .....++.+.+.  .|+++| ||+.|+++++|++|+|++|+|+|.                 +|..++  ++++
T Consensus       178 ------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~  250 (636)
T 4eco_A          178 ------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKD  250 (636)
T ss_dssp             ------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred             ------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCC
Confidence                  111122222222  345554 555555555555555555555543                 555555  5555


Q ss_pred             cchheeccccccCCCCccccccCCCCcEeeccccc-ccC-cCCcccccc------CcCCeeeccCCcccccCcccccccc
Q 047591          236 LRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCM-TTG-RIPKDIGNC------TLLNYLGLRDNQLTDFGANNLTGLI  307 (1624)
Q Consensus       236 L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~-l~g-~ip~~~~~l------~~L~~L~Ls~N~l~~l~~n~l~g~i  307 (1624)
                      |++|+|++|+++|.+|..+ .++++|++|+|++|+ ++| .+|..++++      ++|++|+|++|+++         .|
T Consensus       251 L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~---------~i  320 (636)
T 4eco_A          251 LTDVEVYNCPNLTKLPTFL-KALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK---------TF  320 (636)
T ss_dssp             CCEEEEECCTTCSSCCTTT-TTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS---------SC
T ss_pred             CCEEEecCCcCCccChHHH-hcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC---------cc
Confidence            5555555555555555332 345555555555554 555 555555544      55555555544432         24


Q ss_pred             cc--ccccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCC-CcEEecCCccccccCcccc
Q 047591          308 PS--IIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASK-LTVLELSRNLFSGLVANTF  384 (1624)
Q Consensus       308 p~--~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~-L~~L~Ls~N~l~g~~~~~f  384 (1624)
                      |.  .+.++++|++|+|++|+++|.+| .+ ..+++|++|+|++|+++ .+|..++++++ |++|+|++|.++ .+|..|
T Consensus       321 p~~~~l~~l~~L~~L~L~~N~l~g~ip-~~-~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~  396 (636)
T 4eco_A          321 PVETSLQKMKKLGMLECLYNQLEGKLP-AF-GSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIF  396 (636)
T ss_dssp             CCHHHHTTCTTCCEEECCSCCCEEECC-CC-EEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCC
T ss_pred             CchhhhccCCCCCEEeCcCCcCccchh-hh-CCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhh
Confidence            44  45555555555555555555555 22 24555555555555555 45555555555 555555555555 344445


Q ss_pred             cccc--cccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCccc-------CccccchhhccCCcc
Q 047591          385 GNCR--QLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVG-------NLSKSLEYFYAGSCE  455 (1624)
Q Consensus       385 ~~l~--~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~-------~l~~~L~~L~l~~n~  455 (1624)
                      +.++  +|++|+|++|++..                               .+|..+.       .+. +|++|++++|+
T Consensus       397 ~~~~l~~L~~L~Ls~N~l~~-------------------------------~~p~~l~~~~~~~~~~~-~L~~L~Ls~N~  444 (636)
T 4eco_A          397 DAKSVSVMSAIDFSYNEIGS-------------------------------VDGKNFDPLDPTPFKGI-NVSSINLSNNQ  444 (636)
T ss_dssp             CTTCSSCEEEEECCSSCTTT-------------------------------TTTCSSCTTCSSCCCCC-CEEEEECCSSC
T ss_pred             hhcccCccCEEECcCCcCCC-------------------------------cchhhhcccccccccCC-CCCEEECcCCc
Confidence            4433  55555555554431                               1111111       000 12222222222


Q ss_pred             cCCCCCCC-cCCCCcccEEeccCCccCCCccchhcc--------ccccceecccccccccCCCcccc--CCCCCceeecc
Q 047591          456 LGGGIPAE-FGNLSNIIALSLYQNQLASTIPTTVGK--------LQNLQGLDLSYNNIQGSIPSELC--QLESLNTLLLQ  524 (1624)
Q Consensus       456 l~g~ip~~-~~~l~~L~~L~L~~N~l~g~iP~~~~~--------l~~L~~L~Ls~N~l~g~iP~~l~--~l~~L~~L~L~  524 (1624)
                      +. .+|.. +..+++|++|+|++|+++ .+|..+..        +++|++|+|++|+++ .+|..+.  .+++|+.|+|+
T Consensus       445 l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls  521 (636)
T 4eco_A          445 IS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLS  521 (636)
T ss_dssp             CC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECC
T ss_pred             cC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECC
Confidence            22 11211 223444445555555544 33332221        125555555555555 4555554  55555555555


Q ss_pred             cccccCCCccccccccCCccccccCccccccCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCc
Q 047591          525 GNALQNQIPTCLANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSI  604 (1624)
Q Consensus       525 ~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~i  604 (1624)
                      +|++++ +|..++++++|+.|+|++|+                  ++++|++.+.+|.+++++++|+.|+|++|++ +.|
T Consensus       522 ~N~l~~-ip~~~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~i  581 (636)
T 4eco_A          522 YNSFSK-FPTQPLNSSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKV  581 (636)
T ss_dssp             SSCCSS-CCCGGGGCSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBC
T ss_pred             CCCCCC-cChhhhcCCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-Ccc
Confidence            555554 55555555555555555444                  3366778888888888888888888888888 578


Q ss_pred             cccccCCccccccccccCCCC
Q 047591          605 PSSIGGLKDLTYLALARNGFQ  625 (1624)
Q Consensus       605 P~~~~~l~~L~~L~ls~N~l~  625 (1624)
                      |..+.  ++|+.|||++|++.
T Consensus       582 p~~~~--~~L~~L~Ls~N~l~  600 (636)
T 4eco_A          582 NEKIT--PNISVLDIKDNPNI  600 (636)
T ss_dssp             CSCCC--TTCCEEECCSCTTC
T ss_pred             CHhHh--CcCCEEECcCCCCc
Confidence            87766  68888888888654


No 4  
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00  E-value=1.2e-56  Score=594.35  Aligned_cols=550  Identities=22%  Similarity=0.217  Sum_probs=468.9

Q ss_pred             CccceeeEecCC---------CCcEEEEecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccC
Q 047591           76 VCNWVGVTCGSR---------HGRVTDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSS  146 (1624)
Q Consensus        76 ~C~W~Gv~C~~~---------~~~v~~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~  146 (1624)
                      .|.++-|.|...         ..+++.|+|+++++.+..+..|+++++|++|+|++|++++..|..++.+++|++|+|++
T Consensus         3 ~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~   82 (680)
T 1ziw_A            3 TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH   82 (680)
T ss_dssp             -CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred             eeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence            356666777642         25789999999999997777899999999999999999998999999999999999999


Q ss_pred             CCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCcccccccccccccccccCcccccccccceeccCCcCCCCC
Q 047591          147 NRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEF  226 (1624)
Q Consensus       147 N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~  226 (1624)
                      |+++ .+|+..+.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++++++|++|+|++|++++..
T Consensus        83 n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~  161 (680)
T 1ziw_A           83 NELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK  161 (680)
T ss_dssp             SCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred             CccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence            9998 478777889999999999999999877789999999999999999999999999999999999999999999877


Q ss_pred             CCccc--ccCccchheeccccccCCCCccccccC---------------------------CCCcEeecccccccCcCCc
Q 047591          227 PPTIF--NVSSLRVIVLANNSLFGSLPVDLCRRL---------------------------PSLQELNLRDCMTTGRIPK  277 (1624)
Q Consensus       227 p~~~~--~l~~L~~L~L~~N~l~g~ip~~~~~~l---------------------------~~L~~L~Ls~N~l~g~ip~  277 (1624)
                      |..+.  .+++|++|++++|++++..|.. +..+                           ++|+.|++++|.+++..|.
T Consensus       162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~  240 (680)
T 1ziw_A          162 SEELDIFANSSLKKLELSSNQIKEFSPGC-FHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT  240 (680)
T ss_dssp             HHHHGGGTTCEESEEECTTCCCCCBCTTG-GGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTT
T ss_pred             HHHhhccccccccEEECCCCcccccChhh-hhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChh
Confidence            77654  5689999999999998655543 3332                           5678888999999999999


Q ss_pred             cccccCc--CCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCC-
Q 047591          278 DIGNCTL--LNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSG-  354 (1624)
Q Consensus       278 ~~~~l~~--L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g-  354 (1624)
                      .+..++.  |+.|+|++|++.        +..|..+.++++|++|+|++|++++..|..+. .+++|++|+|++|...+ 
T Consensus       241 ~~~~l~~~~L~~L~Ls~n~l~--------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~~~~~~~  311 (680)
T 1ziw_A          241 TFLGLKWTNLTMLDLSYNNLN--------VVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLH-GLFNVRYLNLKRSFTKQS  311 (680)
T ss_dssp             TTGGGGGSCCCEEECTTSCCC--------EECTTTTTTCTTCCEEECCSCCBSEECTTTTT-TCTTCCEEECTTCBCCC-
T ss_pred             HhhccCcCCCCEEECCCCCcC--------ccCcccccCcccccEeeCCCCccCccChhhhc-CCCCccEEeccchhhhcc
Confidence            9998866  999999887654        44567788899999999999999987776665 78999999999887665 


Q ss_pred             ----cCcc----cccCCCCCcEEecCCccccccCcccccccccccEEEccccccccCCCCCCcccccccccccccceeee
Q 047591          355 ----VIPS----SICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAI  426 (1624)
Q Consensus       355 ----~iP~----~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l  426 (1624)
                          .+|.    .|..+++|++|+|++|++++..+..|.++++|++|+|++|.+....++..  .+..+ ....|+.|++
T Consensus       312 ~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~--~f~~~-~~~~L~~L~L  388 (680)
T 1ziw_A          312 ISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNE--TFVSL-AHSPLHILNL  388 (680)
T ss_dssp             -----CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTT--TTGGG-TTSCCCEEEC
T ss_pred             cccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchh--hhccc-ccCcCceEEC
Confidence                3444    78889999999999999999999999999999999999998643222211  11111 1257999999


Q ss_pred             ccCCCCccCCCcccCccccchhhccCCcccCCCCC-CCcCCCCcccEEeccCCccCCCccchhccccccceecccccccc
Q 047591          427 QTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIP-AEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQ  505 (1624)
Q Consensus       427 ~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip-~~~~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~  505 (1624)
                      ++|++++..|..+..+. +|++|++++|.+.+.+| ..|.++++|++|+|++|++++..|..+..+++|+.|++++|.++
T Consensus       389 ~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~  467 (680)
T 1ziw_A          389 TKNKISKIESDAFSWLG-HLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALK  467 (680)
T ss_dssp             TTSCCCEECTTTTTTCT-TCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCB
T ss_pred             CCCCCCeEChhhhhCCC-CCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccccc
Confidence            99999999998888886 89999999999998777 68999999999999999999888899999999999999999997


Q ss_pred             --cCCCccccCCCCCceeecccccccCCCccccccccCCccccccCccccccCc--------hhhccccccceeeccccc
Q 047591          506 --GSIPSELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLNSTIP--------STFWSLEYILVVDFSLNL  575 (1624)
Q Consensus       506 --g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP--------~~~~~l~~L~~ldLs~N~  575 (1624)
                        +.+|..+.++++|+.|+|++|++++..|..|+++++|++|+|++|++++..+        ..|..+.+|+.|||++|+
T Consensus       468 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~  547 (680)
T 1ziw_A          468 NVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNG  547 (680)
T ss_dssp             CTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSC
T ss_pred             ccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCC
Confidence              6789999999999999999999998878889999999999999999986422        247899999999999999


Q ss_pred             ccCCCC-cccccccccceeeccCCcCCCCccccccCCccccccccccCCCCCCCchhhh-ccccccCC
Q 047591          576 LSGCLP-QDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAIG-SLISLEKG  641 (1624)
Q Consensus       576 l~g~iP-~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~iP~~~~-~l~~L~~~  641 (1624)
                      ++. +| ..++++++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+. .+++|+..
T Consensus       548 l~~-i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l  614 (680)
T 1ziw_A          548 FDE-IPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL  614 (680)
T ss_dssp             CCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEE
T ss_pred             CCC-CCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEE
Confidence            995 55 4689999999999999999976666678999999999999999998887776 56666653


No 5  
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00  E-value=7e-57  Score=597.57  Aligned_cols=518  Identities=18%  Similarity=0.227  Sum_probs=355.1

Q ss_pred             CChhhHHHHHHHHHHhccCCccccccCCCCCCCCCCCCCCCCccc------------eeeEecCCCCcEEEEecCCCCCC
Q 047591           35 NITTDEAALLQVKAHIALDPQNFFERNWNLSATTNTSSSNSVCNW------------VGVTCGSRHGRVTDLSIPNLGLG  102 (1624)
Q Consensus        35 ~~~~d~~aLl~~k~~~~~~p~~~~~~~W~~~~~~~~~~~~~~C~W------------~Gv~C~~~~~~v~~l~l~~~~l~  102 (1624)
                      +..+|++||++||+++. +|      +|+.+.+.+ ....++|.|            .||+|+. ++||+.|+|+++++.
T Consensus       266 ~~~~d~~ALl~~k~~l~-~~------~W~~~~~~~-~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~  336 (876)
T 4ecn_A          266 EYIKDYKALKAIWEALD-GK------NWRYYSGTI-NNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAK  336 (876)
T ss_dssp             HHHHHHHHHHHHHHHTT-GG------GCCCCCSSC-SSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCE
T ss_pred             cchHHHHHHHHHHHHcC-CC------CCCcCCCcc-cccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCC
Confidence            34679999999999994 55      787543111 112334999            9999987 699999999999999


Q ss_pred             ccCCccccCCCcccEEEe-cCCCccccCCcccCCCC-CCcE--------------EE-ccCCCCCCccchhh--------
Q 047591          103 GTIPPHVANLSFLVSLNI-SGNRFHGTLPNELWLMP-RLRI--------------ID-LSSNRISGNLFDDM--------  157 (1624)
Q Consensus       103 g~ip~~i~~L~~L~~L~L-s~N~l~g~iP~~~~~l~-~L~~--------------L~-Ls~N~l~g~~~~~~--------  157 (1624)
                      |.+|++|++|++|++|+| ++|.++|..|-...... .+..              ++ .....+++.++..+        
T Consensus       337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~  416 (876)
T 4ecn_A          337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP  416 (876)
T ss_dssp             EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred             CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence            999999999999999999 99999988654322110 0000              00 00001110000000        


Q ss_pred             --hccCCCcCEEEccC--CcccccCCccccCCCcccccccccccccc-----------------cccCccc--ccccccc
Q 047591          158 --CNSLTELESFDVSS--NQITGQLPSSLGDCSKLKRLSVSFNELTG-----------------RIPQNIG--NLTELME  214 (1624)
Q Consensus       158 --~~~l~~L~~L~Ls~--N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g-----------------~ip~~~~--~l~~L~~  214 (1624)
                        ..+...++.+.+..  |+|+| ||.+|++|++|++|+|++|+|+|                 .+|+.++  ++++|++
T Consensus       417 i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~  495 (876)
T 4ecn_A          417 IKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD  495 (876)
T ss_dssp             CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred             cccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence              01122333334433  77777 77777777777777777777777                 4888887  8899999


Q ss_pred             eeccCCcCCCCCCCcccccCccchheecccc-ccC-CCCcccc------ccCCCCcEeecccccccCcCCc--cccccCc
Q 047591          215 LYLNGNNLQGEFPPTIFNVSSLRVIVLANNS-LFG-SLPVDLC------RRLPSLQELNLRDCMTTGRIPK--DIGNCTL  284 (1624)
Q Consensus       215 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~g-~ip~~~~------~~l~~L~~L~Ls~N~l~g~ip~--~~~~l~~  284 (1624)
                      |+|++|++.|.+|..++++++|++|+|++|+ ++| .+|..+.      ..+++|++|+|++|+++ .+|.  .|+++++
T Consensus       496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~  574 (876)
T 4ecn_A          496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK  574 (876)
T ss_dssp             EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred             EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence            9999999888899888889999999999998 887 7887552      23448999999999988 8888  8899999


Q ss_pred             CCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCC-ccEEEecCCccCCcCcccccCC
Q 047591          285 LNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPN-LLRLYLWGNNLSGVIPSSICNA  363 (1624)
Q Consensus       285 L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~-L~~L~Ls~N~l~g~iP~~~~~l  363 (1624)
                      |+.|+|++|++.         .|| .+.++++|+.|+|++|+++ .+|..++ .+++ |+.|+|++|+|+ .+|..+..+
T Consensus       575 L~~L~Ls~N~l~---------~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~-~l~~~L~~L~Ls~N~L~-~lp~~~~~~  641 (876)
T 4ecn_A          575 LGLLDCVHNKVR---------HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFC-AFTDQVEGLGFSHNKLK-YIPNIFNAK  641 (876)
T ss_dssp             CCEEECTTSCCC---------BCC-CCCTTSEESEEECCSSCCS-CCCTTSC-EECTTCCEEECCSSCCC-SCCSCCCTT
T ss_pred             CCEEECCCCCcc---------cch-hhcCCCcceEEECcCCccc-cchHHHh-hccccCCEEECcCCCCC-cCchhhhcc
Confidence            999988887654         366 7778888999999999988 8888765 6777 999999999988 678888777


Q ss_pred             CC--CcEEecCCccccccCcccc---c--ccccccEEEccccccccCCCCCCccccccc-ccccccceeeeccCCCCccC
Q 047591          364 SK--LTVLELSRNLFSGLVANTF---G--NCRQLQILNLAYSQLATGSLSQGQSFFSSL-TNCRYLRYLAIQTNPWKGIL  435 (1624)
Q Consensus       364 ~~--L~~L~Ls~N~l~g~~~~~f---~--~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l-~~l~~L~~L~l~~N~~~g~~  435 (1624)
                      +.  |+.|+|++|+++|.+|...   +  .+++|+.|+|++|++..        ++..+ ..+++|+.|++++|.++ .+
T Consensus       642 ~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~--------lp~~~~~~l~~L~~L~Ls~N~L~-~i  712 (876)
T 4ecn_A          642 SVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQK--------FPTELFATGSPISTIILSNNLMT-SI  712 (876)
T ss_dssp             CSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCS--------CCHHHHHTTCCCSEEECCSCCCS-CC
T ss_pred             ccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCc--------cCHHHHccCCCCCEEECCCCcCC-cc
Confidence            55  9999999999988776433   2  34478888888887753        11222 24455555666655554 33


Q ss_pred             CCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEeccCCccCCCccchhc--cccccceecccccccccCCCcccc
Q 047591          436 PNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVG--KLQNLQGLDLSYNNIQGSIPSELC  513 (1624)
Q Consensus       436 p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~iP~~~~--~l~~L~~L~Ls~N~l~g~iP~~l~  513 (1624)
                      |..+....                 +..+.++++|++|+|++|+++ .+|..+.  .+++|+.|+|++|+|++ +|..++
T Consensus       713 p~~~~~~~-----------------~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~  773 (876)
T 4ecn_A          713 PENSLKPK-----------------DGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPL  773 (876)
T ss_dssp             CTTSSSCT-----------------TSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGG
T ss_pred             ChHHhccc-----------------cccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhh
Confidence            33222110                 112334556666666666666 5666665  66666666666666665 566666


Q ss_pred             CCCCCceeecccccccCCCccccccccCCccccccCccccccCchhhccccccceeecccccccCCCCccccccccccee
Q 047591          514 QLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGL  593 (1624)
Q Consensus       514 ~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L  593 (1624)
                      ++++|+.|+|++|+                  ++++|++.+.+|..|.++.+|+.|+|++|++ +.||..+.  ++|+.|
T Consensus       774 ~L~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~L  832 (876)
T 4ecn_A          774 NSSQLKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYIL  832 (876)
T ss_dssp             GCTTCCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEE
T ss_pred             cCCCCCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEE
Confidence            66666666666655                  4455666666666666666666666666666 56676655  467777


Q ss_pred             eccCCcCCCCccccccCCccccccccccCCCC
Q 047591          594 YLSGNQLSCSIPSSIGGLKDLTYLALARNGFQ  625 (1624)
Q Consensus       594 ~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~  625 (1624)
                      ||++|++...-+..+.....+..+.|++|++.
T Consensus       833 dLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~  864 (876)
T 4ecn_A          833 DIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ  864 (876)
T ss_dssp             ECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred             ECCCCCCCccChHHccccccchheeecCCCcc
Confidence            77777776544555555555566666666554


No 6  
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00  E-value=1e-54  Score=575.72  Aligned_cols=548  Identities=20%  Similarity=0.225  Sum_probs=461.5

Q ss_pred             EEecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCC
Q 047591           93 DLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSN  172 (1624)
Q Consensus        93 ~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N  172 (1624)
                      .++.++++++ .+|..+.  ++|++|+|++|++++..|..|+.+++|++|||++|++++ ++++.+.++++|++|+|++|
T Consensus         8 ~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n   83 (680)
T 1ziw_A            8 VADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK-LEPELCQKLPMLKVLNLQHN   83 (680)
T ss_dssp             EEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCC-CCTTHHHHCTTCCEEECCSS
T ss_pred             eeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCc-cCHHHHhcccCcCEEECCCC
Confidence            4677888875 4787765  789999999999998777889999999999999999986 45566788999999999999


Q ss_pred             cccccCCccccCCCcccccccccccccccccCcccccccccceeccCCcCCCCCCCcccccCccchheeccccccCCCCc
Q 047591          173 QITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPV  252 (1624)
Q Consensus       173 ~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~  252 (1624)
                      ++++..+.+|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++++++|++|+|++|.+++..|.
T Consensus        84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~  163 (680)
T 1ziw_A           84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE  163 (680)
T ss_dssp             CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred             ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence            99965555799999999999999999977778999999999999999999999999999999999999999999865554


Q ss_pred             cc-cccCCCCcEeecccccccCcCCccccccCcCCeeeccCCccc-------------------ccCccccccccccccc
Q 047591          253 DL-CRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLT-------------------DFGANNLTGLIPSIIF  312 (1624)
Q Consensus       253 ~~-~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~-------------------~l~~n~l~g~ip~~~~  312 (1624)
                      .+ +..+++|++|++++|++++..|..++.+.+|+.|++++|++.                   +++.|.+++..|..+.
T Consensus       164 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~  243 (680)
T 1ziw_A          164 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL  243 (680)
T ss_dssp             HHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTG
T ss_pred             HhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhh
Confidence            33 125689999999999999999999999999988888877542                   4566777887888887


Q ss_pred             cCCC--ccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccc-----cCc----
Q 047591          313 NNSN--IEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSG-----LVA----  381 (1624)
Q Consensus       313 ~~~~--L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g-----~~~----  381 (1624)
                      ++..  |+.|+|++|++++..|..+. .+++|++|+|++|++++.+|..|.++++|++|+|++|...+     .+|    
T Consensus       244 ~l~~~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~  322 (680)
T 1ziw_A          244 GLKWTNLTMLDLSYNNLNVVGNDSFA-WLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD  322 (680)
T ss_dssp             GGGGSCCCEEECTTSCCCEECTTTTT-TCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECT
T ss_pred             ccCcCCCCEEECCCCCcCccCccccc-CcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccCh
Confidence            7754  99999999998876666554 78889999999999988888888889999999998876554     222    


Q ss_pred             ccccccccccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCcc-CC-CcccCcc-ccchhhccCCcccCC
Q 047591          382 NTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGI-LP-NSVGNLS-KSLEYFYAGSCELGG  458 (1624)
Q Consensus       382 ~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~-~p-~~~~~l~-~~L~~L~l~~n~l~g  458 (1624)
                      ..|+.+++|++|+|++|++....       +..+..+++|++|++++|.+.+. ++ ..+..+. ..|+.|++++|++.+
T Consensus       323 ~~~~~l~~L~~L~l~~n~l~~~~-------~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~  395 (680)
T 1ziw_A          323 FSFQWLKCLEHLNMEDNDIPGIK-------SNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISK  395 (680)
T ss_dssp             TTTTTCTTCCEEECCSCCBCCCC-------TTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCE
T ss_pred             hhcccCCCCCEEECCCCccCCCC-------hhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCe
Confidence            37888899999999999886522       23466788899999998876543 22 2232221 368899999999999


Q ss_pred             CCCCCcCCCCcccEEeccCCccCCCcc-chhccccccceecccccccccCCCccccCCCCCceeeccccccc--CCCccc
Q 047591          459 GIPAEFGNLSNIIALSLYQNQLASTIP-TTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQ--NQIPTC  535 (1624)
Q Consensus       459 ~ip~~~~~l~~L~~L~L~~N~l~g~iP-~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~--g~iP~~  535 (1624)
                      ..|.+|..+++|++|+|++|++++.+| ..+..+++|++|+|++|++++..|..+..+++|+.|++++|.++  +.+|..
T Consensus       396 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~  475 (680)
T 1ziw_A          396 IESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSP  475 (680)
T ss_dssp             ECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCT
T ss_pred             EChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcc
Confidence            999999999999999999999998777 68899999999999999999888999999999999999999997  678999


Q ss_pred             cccccCCccccccCccccccCchhhccccccceeecccccccCCC--------CcccccccccceeeccCCcCCCCccc-
Q 047591          536 LANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCL--------PQDIGNLKVLTGLYLSGNQLSCSIPS-  606 (1624)
Q Consensus       536 ~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~i--------P~~l~~l~~L~~L~Ls~N~l~g~iP~-  606 (1624)
                      |+++++|+.|+|++|++++..|..|..+.+|+.|||++|++++..        +..++++++|+.|+|++|+++ .||. 
T Consensus       476 ~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~  554 (680)
T 1ziw_A          476 FQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVE  554 (680)
T ss_dssp             TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTT
T ss_pred             cccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHH
Confidence            999999999999999999888888999999999999999998632        234789999999999999999 5665 


Q ss_pred             cccCCccccccccccCCCCCCCchhhhccccccCCCCCCCCCccccCC
Q 047591          607 SIGGLKDLTYLALARNGFQGSIPEAIGSLISLEKGEIPSGGPFVNFTE  654 (1624)
Q Consensus       607 ~~~~l~~L~~L~ls~N~l~g~iP~~~~~l~~L~~~~i~~~~~~~~~~~  654 (1624)
                      .|+++++|+.|+|++|++++..|..+..+.+|+...+. ++++...++
T Consensus       555 ~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~-~N~l~~~~~  601 (680)
T 1ziw_A          555 VFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQ-KNLITSVEK  601 (680)
T ss_dssp             TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECT-TSCCCBCCH
T ss_pred             HcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECC-CCcCCccCh
Confidence            68999999999999999997666667888888876553 345544443


No 7  
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00  E-value=2.5e-55  Score=573.79  Aligned_cols=510  Identities=23%  Similarity=0.219  Sum_probs=404.5

Q ss_pred             cCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCcccc
Q 047591          104 TIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLG  183 (1624)
Q Consensus       104 ~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~  183 (1624)
                      .+|..+..  .+++|+|++|++++..|..|+.+++|++|+|++|++++ ++++.+.++++|++|+|++|++++..|..|+
T Consensus        26 ~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~  102 (606)
T 3t6q_A           26 EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW-IHEDTFQSQHRLDTLVLTANPLIFMAETALS  102 (606)
T ss_dssp             SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCSEECTTTTS
T ss_pred             cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccce-eChhhccCccccCeeeCCCCcccccChhhhc
Confidence            35555543  57888999999888778888888999999999988875 4555567888899999999988888888888


Q ss_pred             CCCcccccccccccccccccCcccccccccceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCc-
Q 047591          184 DCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQ-  262 (1624)
Q Consensus       184 ~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~-  262 (1624)
                      ++++|++|+|++|++++..|..++++++|++|+|++|++++..++.+..+++|++|+|++|.+++ ++...+..+++|+ 
T Consensus       103 ~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~  181 (606)
T 3t6q_A          103 GPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY-LSKEDMSSLQQATN  181 (606)
T ss_dssp             SCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE-ECHHHHHTTTTCCS
T ss_pred             ccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc-cChhhhhhhcccce
Confidence            88999999999998887667888888889999999998887444445558889999999988874 4445567788888 


Q ss_pred             -EeecccccccCcCCccccccCcCCeeeccCCc---------------------ccccCccccccccccccccCCCccEE
Q 047591          263 -ELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQ---------------------LTDFGANNLTGLIPSIIFNNSNIEVI  320 (1624)
Q Consensus       263 -~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~---------------------l~~l~~n~l~g~ip~~~~~~~~L~~L  320 (1624)
                       .|++++|.+++..|..+.. .+|+.|++++|.                     +.+.....++......+.. .+|+.|
T Consensus       182 l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~-~~L~~L  259 (606)
T 3t6q_A          182 LSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCE-MSVESI  259 (606)
T ss_dssp             EEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGG-SEEEEE
T ss_pred             eEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhc-CceeEE
Confidence             8888888888877776654 578888888774                     1111112222222222221 278889


Q ss_pred             EeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEcccccc
Q 047591          321 QLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQL  400 (1624)
Q Consensus       321 ~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l  400 (1624)
                      ++++|++++ +|...+..+++|++|+|++|+++ .+|..+.++++|++|+|++|.+++.+|..|+++++|++|++++|++
T Consensus       260 ~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~  337 (606)
T 3t6q_A          260 NLQKHYFFN-ISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTK  337 (606)
T ss_dssp             ECTTCCCSS-CCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSS
T ss_pred             EeecCccCc-cCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCc
Confidence            999999885 44444457889999999999988 6788888899999999999999988888899999999999999887


Q ss_pred             ccCCCCCCcccccccccccccceeeeccCCCCccC--CCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEeccCC
Q 047591          401 ATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGIL--PNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQN  478 (1624)
Q Consensus       401 ~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~--p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N  478 (1624)
                      ... +     ....+..+++|++|++++|.+.+..  |..+..+. +|++|++++|.+.+..|..|+++++|++|+|++|
T Consensus       338 ~~~-~-----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n  410 (606)
T 3t6q_A          338 RLE-L-----GTGCLENLENLRELDLSHDDIETSDCCNLQLRNLS-HLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFT  410 (606)
T ss_dssp             CCB-C-----CSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCT-TCCEEECCSCSCEEECTTTTTTCTTCSEEECTTC
T ss_pred             ccc-c-----chhhhhccCcCCEEECCCCccccccCcchhcccCC-CCCEEECCCCcCCcCCHHHhcCCccCCeEECCCC
Confidence            521 1     1234667888889999999888765  66777776 7888888888888888888888888888888888


Q ss_pred             ccCCCccc-hhccccccceecccccccccCCCccccCCCCCceeecccccccCC---CccccccccCCccccccCccccc
Q 047591          479 QLASTIPT-TVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQ---IPTCLANLTSLRALNLSSNRLNS  554 (1624)
Q Consensus       479 ~l~g~iP~-~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~---iP~~~~~l~~L~~L~Ls~N~l~g  554 (1624)
                      ++++..|. .+..+++|++|++++|.+++..|..+.++++|+.|+|++|++++.   .+..+..+++|+.|+|++|++++
T Consensus       411 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~  490 (606)
T 3t6q_A          411 RLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS  490 (606)
T ss_dssp             CEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCE
T ss_pred             cCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCc
Confidence            88877655 478888888888888888888888888888888888888888762   33668888888888888888888


Q ss_pred             cCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCccccccCCccccccccccCCCCCCCc
Q 047591          555 TIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIP  629 (1624)
Q Consensus       555 ~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~iP  629 (1624)
                      ..|..|..+++|+.|||++|++++.+|..+.+++.| .|+|++|++++.+|..++.+++|+.|++++|++++..+
T Consensus       491 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~  564 (606)
T 3t6q_A          491 IDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS  564 (606)
T ss_dssp             ECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred             cChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence            888888888888888888888888888888888888 88888888888888888888888888888888887666


No 8  
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00  E-value=1e-53  Score=558.40  Aligned_cols=500  Identities=19%  Similarity=0.200  Sum_probs=436.6

Q ss_pred             EecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCcccccccccccc
Q 047591          119 NISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNEL  198 (1624)
Q Consensus       119 ~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l  198 (1624)
                      +.++..++ .+|..+.  +++++|||++|+|++ +++..+.++++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus        18 ~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l   93 (606)
T 3t6q_A           18 NCENLGLN-EIPGTLP--NSTECLEFSFNVLPT-IQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL   93 (606)
T ss_dssp             ECTTSCCS-SCCTTSC--TTCCEEECTTCCCSE-ECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred             ECCCCCcc-cCcCCCC--CcCcEEEccCCccCc-CChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence            33445555 6777665  379999999999985 5566678999999999999999999999999999999999999999


Q ss_pred             cccccCcccccccccceeccCCcCCCCCCCcccccCccchheeccccccC-CCCccccccCCCCcEeecccccccCcCCc
Q 047591          199 TGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFG-SLPVDLCRRLPSLQELNLRDCMTTGRIPK  277 (1624)
Q Consensus       199 ~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~  277 (1624)
                      ++..|..|+++++|++|+|++|++++..|..++++++|++|+|++|++++ .+|. . ..+++|++|++++|.+++..|.
T Consensus        94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~-~~l~~L~~L~L~~n~l~~~~~~  171 (606)
T 3t6q_A           94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPK-G-FPTEKLKVLDFQNNAIHYLSKE  171 (606)
T ss_dssp             SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCT-T-CCCTTCCEEECCSSCCCEECHH
T ss_pred             cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCccc-c-cCCcccCEEEcccCcccccChh
Confidence            99999999999999999999999998778889999999999999999986 3343 3 3499999999999999999999


Q ss_pred             cccccCcCC--eeeccCCcccccCccccccccccccccCCCccEEEeecccC---------------------C----CC
Q 047591          278 DIGNCTLLN--YLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHL---------------------S----GN  330 (1624)
Q Consensus       278 ~~~~l~~L~--~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l---------------------~----g~  330 (1624)
                      .++.+++|+  .|++++|++..        ..|. .+...+|+.|++++|.-                     .    ..
T Consensus       172 ~~~~l~~L~~l~L~l~~n~l~~--------~~~~-~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~  242 (606)
T 3t6q_A          172 DMSSLQQATNLSLNLNGNDIAG--------IEPG-AFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDED  242 (606)
T ss_dssp             HHHTTTTCCSEEEECTTCCCCE--------ECTT-TTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCC
T ss_pred             hhhhhcccceeEEecCCCccCc--------cChh-HhhhccccccccCCchhHHHHhhhccccchhheechhhccccccc
Confidence            999999999  88988887654        3333 34456788888887751                     0    12


Q ss_pred             CCCcccccCC--CccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEccccccccCCCCCC
Q 047591          331 LPSSTGINLP--NLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQG  408 (1624)
Q Consensus       331 ip~~~~~~l~--~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~  408 (1624)
                      ++...+..+.  +|+.|++++|++++..|..|.++++|++|+|++|+++ .+|..|+++++|++|+|++|++...     
T Consensus       243 i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~-----  316 (606)
T 3t6q_A          243 ISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENL-----  316 (606)
T ss_dssp             CCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBG-----
T ss_pred             cChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcC-----
Confidence            2222222222  7999999999999988888999999999999999999 5677899999999999999998642     


Q ss_pred             cccccccccccccceeeeccCCCCccCCCc-ccCccccchhhccCCcccCCCC--CCCcCCCCcccEEeccCCccCCCcc
Q 047591          409 QSFFSSLTNCRYLRYLAIQTNPWKGILPNS-VGNLSKSLEYFYAGSCELGGGI--PAEFGNLSNIIALSLYQNQLASTIP  485 (1624)
Q Consensus       409 ~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~-~~~l~~~L~~L~l~~n~l~g~i--p~~~~~l~~L~~L~L~~N~l~g~iP  485 (1624)
                        .+..+..+++|++|++++|.+.+.+|.. +..+. +|++|++++|.+.+..  |..++++++|++|+|++|++++..|
T Consensus       317 --~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~  393 (606)
T 3t6q_A          317 --CQISASNFPSLTHLSIKGNTKRLELGTGCLENLE-NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKT  393 (606)
T ss_dssp             --GGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT-TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECT
T ss_pred             --chhhhhccCcCCEEECCCCCcccccchhhhhccC-cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCH
Confidence              2346778899999999999999888765 66665 8999999999999876  8899999999999999999999899


Q ss_pred             chhccccccceecccccccccCCCcc-ccCCCCCceeecccccccCCCccccccccCCccccccCcccccc---Cchhhc
Q 047591          486 TTVGKLQNLQGLDLSYNNIQGSIPSE-LCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLNST---IPSTFW  561 (1624)
Q Consensus       486 ~~~~~l~~L~~L~Ls~N~l~g~iP~~-l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~---iP~~~~  561 (1624)
                      ..++.+++|++|+|++|++++..|.. +.++++|+.|+|++|++++..|..++.+++|++|+|++|++++.   .+..+.
T Consensus       394 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~  473 (606)
T 3t6q_A          394 EAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQ  473 (606)
T ss_dssp             TTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGG
T ss_pred             HHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhc
Confidence            99999999999999999999887654 89999999999999999999999999999999999999999873   336799


Q ss_pred             cccccceeecccccccCCCCcccccccccceeeccCCcCCCCccccccCCccccccccccCCCCCCCchhhhccccccCC
Q 047591          562 SLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAIGSLISLEKG  641 (1624)
Q Consensus       562 ~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~iP~~~~~l~~L~~~  641 (1624)
                      .+.+|+.|++++|.+++.+|..++.+++|+.|+|++|++++.+|..+.+++.| +|++++|++++.+|..+..+++|+..
T Consensus       474 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L  552 (606)
T 3t6q_A          474 TLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTI  552 (606)
T ss_dssp             GCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEE
T ss_pred             cCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEE
Confidence            99999999999999999999999999999999999999999999999999999 99999999999999888888888765


Q ss_pred             CC
Q 047591          642 EI  643 (1624)
Q Consensus       642 ~i  643 (1624)
                      .+
T Consensus       553 ~l  554 (606)
T 3t6q_A          553 NL  554 (606)
T ss_dssp             EC
T ss_pred             eC
Confidence            44


No 9  
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00  E-value=2.7e-53  Score=573.77  Aligned_cols=526  Identities=21%  Similarity=0.205  Sum_probs=423.5

Q ss_pred             ccceeeEecCCCCcEEEEecCCCCCCccCCccccCCCcccEEEecCCCccccC-CcccCCCCCCcEEEccCCCCCCccch
Q 047591           77 CNWVGVTCGSRHGRVTDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTL-PNELWLMPRLRIIDLSSNRISGNLFD  155 (1624)
Q Consensus        77 C~W~Gv~C~~~~~~v~~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~i-P~~~~~l~~L~~L~Ls~N~l~g~~~~  155 (1624)
                      |+|..|-+  ...+++.|+|+++.+++..|..|.+|++|++|+|++|.+.+.+ |..|+.+++|++|+|++|++++. ++
T Consensus        14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~-~p   90 (844)
T 3j0a_A           14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFL-HP   90 (844)
T ss_dssp             CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEE-CT
T ss_pred             CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCccc-CH
Confidence            45666666  4467888888888888888888888888888888888776676 77788888888888888888754 44


Q ss_pred             hhhccCCCcCEEEccCCcccccCCcc--ccCCCccccccccccccccccc-CcccccccccceeccCCcCCCCCCCcccc
Q 047591          156 DMCNSLTELESFDVSSNQITGQLPSS--LGDCSKLKRLSVSFNELTGRIP-QNIGNLTELMELYLNGNNLQGEFPPTIFN  232 (1624)
Q Consensus       156 ~~~~~l~~L~~L~Ls~N~l~g~iP~~--l~~l~~L~~L~Ls~N~l~g~ip-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~  232 (1624)
                      +.+.++++|++|+|++|++++.+|..  |+++++|++|||++|.+++..| ..|+++++|++|+|++|++++..|..+..
T Consensus        91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~  170 (844)
T 3j0a_A           91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP  170 (844)
T ss_dssp             TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred             hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence            55678888888888888888877765  8888888888888888887655 46888888888888888888888888887


Q ss_pred             c--CccchheeccccccCCCCccccccCC------CCcEeecccccccCcCCcccccc---CcCCeeeccCCccc-ccCc
Q 047591          233 V--SSLRVIVLANNSLFGSLPVDLCRRLP------SLQELNLRDCMTTGRIPKDIGNC---TLLNYLGLRDNQLT-DFGA  300 (1624)
Q Consensus       233 l--~~L~~L~L~~N~l~g~ip~~~~~~l~------~L~~L~Ls~N~l~g~ip~~~~~l---~~L~~L~Ls~N~l~-~l~~  300 (1624)
                      +  ++|+.|+|++|.+++.+|..+. .++      +|++|++++|.+++.+|..+...   ++++.|+++++.+. +++.
T Consensus       171 l~~~~L~~L~L~~n~l~~~~~~~~~-~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~  249 (844)
T 3j0a_A          171 LQGKTLSFFSLAANSLYSRVSVDWG-KCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGF  249 (844)
T ss_dssp             HHHCSSCCCEECCSBSCCCCCCCCC-SSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSC
T ss_pred             ccCCccceEECCCCccccccccchh-hcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccc
Confidence            7  7888888888888887776542 333      38888888888888888877654   56777777744332 2334


Q ss_pred             cccccccccccccC--CCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccc
Q 047591          301 NNLTGLIPSIIFNN--SNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSG  378 (1624)
Q Consensus       301 n~l~g~ip~~~~~~--~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g  378 (1624)
                      +.+.+..+..+..+  ++|+.|+|++|.+++..|..+ ..+++|+.|+|++|++++..|..|.++++|++|+|++|.+++
T Consensus       250 ~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~  328 (844)
T 3j0a_A          250 HNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF-ETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGE  328 (844)
T ss_dssp             SSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCS-SSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSC
T ss_pred             cccCCCChhhhhccccCCccEEECCCCcccccChhhh-hcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCc
Confidence            44544444444443  689999999999987666555 479999999999999999989999999999999999999999


Q ss_pred             cCcccccccccccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCC
Q 047591          379 LVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGG  458 (1624)
Q Consensus       379 ~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g  458 (1624)
                      ..|..|.++++|++|+|++|++....       ...+..+++|++|++++|.+++...     + .+|+.|++++|++. 
T Consensus       329 ~~~~~~~~l~~L~~L~L~~N~i~~~~-------~~~~~~l~~L~~L~Ls~N~l~~i~~-----~-~~L~~L~l~~N~l~-  394 (844)
T 3j0a_A          329 LYSSNFYGLPKVAYIDLQKNHIAIIQ-------DQTFKFLEKLQTLDLRDNALTTIHF-----I-PSIPDIFLSGNKLV-  394 (844)
T ss_dssp             CCSCSCSSCTTCCEEECCSCCCCCCC-------SSCSCSCCCCCEEEEETCCSCCCSS-----C-CSCSEEEEESCCCC-
T ss_pred             cCHHHhcCCCCCCEEECCCCCCCccC-------hhhhcCCCCCCEEECCCCCCCcccC-----C-CCcchhccCCCCcc-
Confidence            99999999999999999999986432       2346778899999999999875322     2 37889999999998 


Q ss_pred             CCCCCcCCCCcccEEeccCCccCCC-ccchhccccccceecccccccccCCCc-cccCCCCCceeeccccccc-----CC
Q 047591          459 GIPAEFGNLSNIIALSLYQNQLAST-IPTTVGKLQNLQGLDLSYNNIQGSIPS-ELCQLESLNTLLLQGNALQ-----NQ  531 (1624)
Q Consensus       459 ~ip~~~~~l~~L~~L~L~~N~l~g~-iP~~~~~l~~L~~L~Ls~N~l~g~iP~-~l~~l~~L~~L~L~~N~l~-----g~  531 (1624)
                      .+|..   ..+++.|++++|++++. .+..++.+++|++|+|++|++++..+. .+..+++|+.|+|++|.++     +.
T Consensus       395 ~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~  471 (844)
T 3j0a_A          395 TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETEL  471 (844)
T ss_dssp             CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCC
T ss_pred             ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcccccccccc
Confidence            45654   46788999999999863 334567899999999999999975543 3566889999999999997     45


Q ss_pred             CccccccccCCccccccCccccccCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCccccccCC
Q 047591          532 IPTCLANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGL  611 (1624)
Q Consensus       532 iP~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l  611 (1624)
                      .|..|.++++|+.|+|++|++++.+|..|..+++|+.|||++|+|++..|..+.  ++|+.|+|++|+|++.+|..+.  
T Consensus       472 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~--  547 (844)
T 3j0a_A          472 CWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV--  547 (844)
T ss_dssp             CSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS--
T ss_pred             chhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC--
Confidence            567788999999999999999998888899999999999999999986666665  8899999999999998887764  


Q ss_pred             ccccccccccCCCCCCCc
Q 047591          612 KDLTYLALARNGFQGSIP  629 (1624)
Q Consensus       612 ~~L~~L~ls~N~l~g~iP  629 (1624)
                       +|+.|++++|.+.+..+
T Consensus       548 -~L~~l~l~~Np~~C~c~  564 (844)
T 3j0a_A          548 -SLSVLDITHNKFICECE  564 (844)
T ss_dssp             -SCCEEEEEEECCCCSSS
T ss_pred             -CcCEEEecCCCcccccc
Confidence             67889999999987655


No 10 
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00  E-value=3.4e-54  Score=563.02  Aligned_cols=519  Identities=20%  Similarity=0.182  Sum_probs=416.8

Q ss_pred             CcEEEEecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEE
Q 047591           89 GRVTDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFD  168 (1624)
Q Consensus        89 ~~v~~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~  168 (1624)
                      .+++.|+|+++.+.+..|..|.++++|++|+|++|++++..|..|+.+++|++|+|++|++++ ++++.++++++|++|+
T Consensus        32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~  110 (606)
T 3vq2_A           32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQS-FSPGSFSGLTSLENLV  110 (606)
T ss_dssp             TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCC-CCTTSSTTCTTCCEEE
T ss_pred             CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccc-cChhhcCCcccCCEEE
Confidence            457788888888887777788888888888888888887777788888888888888888875 3444557788888888


Q ss_pred             ccCCcccccCCccccCCCcccccccccccccc-cccCcccccccccceeccCCcCCCCCCCcccccCccc----hheecc
Q 047591          169 VSSNQITGQLPSSLGDCSKLKRLSVSFNELTG-RIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLR----VIVLAN  243 (1624)
Q Consensus       169 Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~----~L~L~~  243 (1624)
                      |++|++++..|..++++++|++|+|++|++++ .+|..|+++++|++|+|++|++++..|..++.+++|+    +|++++
T Consensus       111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~  190 (606)
T 3vq2_A          111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL  190 (606)
T ss_dssp             CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred             ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence            88888887666778888888888888888875 5688888888888888888888877777777777665    688888


Q ss_pred             ccccCCCCccccccCCCCcEeeccccccc-CcCCccccccCcCCeeeccCCcccccCc-cccccccccccccCCCccEEE
Q 047591          244 NSLFGSLPVDLCRRLPSLQELNLRDCMTT-GRIPKDIGNCTLLNYLGLRDNQLTDFGA-NNLTGLIPSIIFNNSNIEVIQ  321 (1624)
Q Consensus       244 N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~-g~ip~~~~~l~~L~~L~Ls~N~l~~l~~-n~l~g~ip~~~~~~~~L~~L~  321 (1624)
                      |.++ .+|...+... +|++|++++|.++ +.+|..+++++.|+.+++..+.+..... ..+.+..+..+..+ +++.++
T Consensus       191 n~l~-~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l-~l~~l~  267 (606)
T 3vq2_A          191 NPID-FIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDV-TIDEFR  267 (606)
T ss_dssp             CCCC-EECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGS-EEEEEE
T ss_pred             CCcc-eeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhc-cHhhee
Confidence            8886 5666665444 7888888888776 4667777888888887776554332110 01122222223332 466777


Q ss_pred             e-ecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEcccccc
Q 047591          322 L-YGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQL  400 (1624)
Q Consensus       322 L-s~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l  400 (1624)
                      + +.|.++|.+|.  +..+++|+.|++++|.+.. +| .+..+++|+.|++++|.+ +.+| .+ .+++|++|++++|+.
T Consensus       268 l~~~~~~~~~~~~--~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~  340 (606)
T 3vq2_A          268 LTYTNDFSDDIVK--FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKG  340 (606)
T ss_dssp             ECCCTTCCGGGGS--CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSS
T ss_pred             ccccccccccccc--cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcC
Confidence            7 77888888887  4478899999999999874 66 888889999999999999 5666 45 899999999999854


Q ss_pred             ccCCCCCCcccccccccccccceeeeccCCCCcc--CCCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEeccCC
Q 047591          401 ATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGI--LPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQN  478 (1624)
Q Consensus       401 ~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~--~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N  478 (1624)
                      ..         ...+..+++|++|++++|.+++.  +|..+..+. .|++|++++|.+.+ +|..|..+++|++|++++|
T Consensus       341 ~~---------~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~-~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n  409 (606)
T 3vq2_A          341 SI---------SFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTN-SLRHLDLSFNGAII-MSANFMGLEELQHLDFQHS  409 (606)
T ss_dssp             CE---------ECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCS-CCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTS
T ss_pred             cc---------chhhccCCCCCEEECcCCccCCCcchhhhhccCC-cccEeECCCCcccc-chhhccCCCCCCeeECCCC
Confidence            32         11455788899999999998876  477777776 79999999999876 6688999999999999999


Q ss_pred             ccCCCcc-chhccccccceecccccccccCCCccccCCCCCceeecccccccC-CCccccccccCCccccccCccccccC
Q 047591          479 QLASTIP-TTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQN-QIPTCLANLTSLRALNLSSNRLNSTI  556 (1624)
Q Consensus       479 ~l~g~iP-~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g-~iP~~~~~l~~L~~L~Ls~N~l~g~i  556 (1624)
                      ++++..| ..+..+++|++|++++|++++.+|..++++++|+.|+|++|++++ .+|..++++++|+.|+|++|++++.+
T Consensus       410 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~  489 (606)
T 3vq2_A          410 TLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQIS  489 (606)
T ss_dssp             EEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred             ccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccC
Confidence            9998877 688999999999999999999899999999999999999999998 47889999999999999999999988


Q ss_pred             chhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCccccccCCc-cccccccccCCCCCCCch
Q 047591          557 PSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLK-DLTYLALARNGFQGSIPE  630 (1624)
Q Consensus       557 P~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~-~L~~L~ls~N~l~g~iP~  630 (1624)
                      |..|..+++|+.|+|++|++++.+|..++++++|+.|+|++|+++ .+|..+..++ +|++|++++|++.+..+.
T Consensus       490 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~  563 (606)
T 3vq2_A          490 WGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH  563 (606)
T ss_dssp             TTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred             hhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence            999999999999999999999988999999999999999999999 7888898887 599999999999876663


No 11 
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00  E-value=1.4e-52  Score=547.66  Aligned_cols=517  Identities=19%  Similarity=0.157  Sum_probs=447.8

Q ss_pred             EecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCc
Q 047591           94 LSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQ  173 (1624)
Q Consensus        94 l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~  173 (1624)
                      ++.++.+++ .+|..+.  ++|++|+|++|++++..|..|..+++|++|||++|++++ +++..+.++++|++|+|++|+
T Consensus        16 ~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-i~~~~~~~l~~L~~L~Ls~n~   91 (606)
T 3vq2_A           16 YQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIET-IEDKAWHGLHHLSNLILTGNP   91 (606)
T ss_dssp             EECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCC
T ss_pred             eEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccc-cCHHHhhchhhcCEeECCCCc
Confidence            344444543 4666554  789999999999998888899999999999999999985 566667899999999999999


Q ss_pred             ccccCCccccCCCcccccccccccccccccCcccccccccceeccCCcCCC-CCCCcccccCccchheeccccccCCCCc
Q 047591          174 ITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQG-EFPPTIFNVSSLRVIVLANNSLFGSLPV  252 (1624)
Q Consensus       174 l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~ip~  252 (1624)
                      +++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..++++++|++|+|++|++++..| 
T Consensus        92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~-  170 (606)
T 3vq2_A           92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITV-  170 (606)
T ss_dssp             CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECT-
T ss_pred             ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecCh-
Confidence            999889999999999999999999998777899999999999999999986 689999999999999999999986444 


Q ss_pred             cccccCCCCc----EeecccccccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeecccCC
Q 047591          253 DLCRRLPSLQ----ELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLS  328 (1624)
Q Consensus       253 ~~~~~l~~L~----~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~  328 (1624)
                      ..+..+++|+    +|++++|.+++..+..+... +|+.|+|++|.+..       +.+|..+.++++|+.+++..+.+.
T Consensus       171 ~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~-------~~~~~~~~~l~~L~~l~l~~~~~~  242 (606)
T 3vq2_A          171 NDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSS-------NIMKTCLQNLAGLHVHRLILGEFK  242 (606)
T ss_dssp             TTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCH-------HHHHHHHHTTTTCEEEEEEEECCT
T ss_pred             hhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccch-------hHHHHHhccccccccccccccccc
Confidence            4445666554    89999999997766666555 89999999887542       457888999999999999877765


Q ss_pred             CC-----CCCcccccCC--CccEEEe-cCCccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEcccccc
Q 047591          329 GN-----LPSSTGINLP--NLLRLYL-WGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQL  400 (1624)
Q Consensus       329 g~-----ip~~~~~~l~--~L~~L~L-s~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l  400 (1624)
                      +.     ++......+.  .++.+++ ..|.+++.+|. +..+++|+.|++++|.+...+  .+..+++|++|++++|++
T Consensus       243 ~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~--~l~~~~~L~~L~l~~n~l  319 (606)
T 3vq2_A          243 DERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE--DVPKHFKWQSLSIIRCQL  319 (606)
T ss_dssp             TSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC--CCCTTCCCSEEEEESCCC
T ss_pred             cCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchhhh--hccccccCCEEEcccccC
Confidence            42     1111111111  5677888 88899999988 999999999999999997754  899999999999999999


Q ss_pred             ccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCCC--CCCCcCCCCcccEEeccCC
Q 047591          401 ATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGG--IPAEFGNLSNIIALSLYQN  478 (1624)
Q Consensus       401 ~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~--ip~~~~~l~~L~~L~L~~N  478 (1624)
                      ...        + .+ .+++|++|++++|...+.+  .++.+. .|++|++++|++++.  +|..+..+++|++|+|++|
T Consensus       320 ~~l--------p-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~-~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n  386 (606)
T 3vq2_A          320 KQF--------P-TL-DLPFLKSLTLTMNKGSISF--KKVALP-SLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFN  386 (606)
T ss_dssp             SSC--------C-CC-CCSSCCEEEEESCSSCEEC--CCCCCT-TCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSC
T ss_pred             ccc--------c-cC-CCCccceeeccCCcCccch--hhccCC-CCCEEECcCCccCCCcchhhhhccCCcccEeECCCC
Confidence            432        2 34 7889999999999776655  455665 899999999999877  4888999999999999999


Q ss_pred             ccCCCccchhccccccceecccccccccCCC-ccccCCCCCceeecccccccCCCccccccccCCccccccCccccc-cC
Q 047591          479 QLASTIPTTVGKLQNLQGLDLSYNNIQGSIP-SELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLNS-TI  556 (1624)
Q Consensus       479 ~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP-~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g-~i  556 (1624)
                      ++++ +|..+..+++|++|++++|++++..| ..+.++++|+.|++++|++++.+|..++++++|++|+|++|++++ .+
T Consensus       387 ~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~  465 (606)
T 3vq2_A          387 GAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTL  465 (606)
T ss_dssp             SEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEE
T ss_pred             cccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcch
Confidence            9985 77899999999999999999998888 689999999999999999999999999999999999999999998 47


Q ss_pred             chhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCccccccCCccccccccccCCCCCCCchhhhccc
Q 047591          557 PSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAIGSLI  636 (1624)
Q Consensus       557 P~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~iP~~~~~l~  636 (1624)
                      |..|..+.+|+.||+++|++++.+|..++.+++|+.|+|++|++++.+|..++++++|++|++++|+++ .+|..+..++
T Consensus       466 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~  544 (606)
T 3vq2_A          466 SNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFP  544 (606)
T ss_dssp             CSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSC
T ss_pred             HHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999 7888777775


Q ss_pred             -cccCC
Q 047591          637 -SLEKG  641 (1624)
Q Consensus       637 -~L~~~  641 (1624)
                       +|+..
T Consensus       545 ~~L~~l  550 (606)
T 3vq2_A          545 KSLAFF  550 (606)
T ss_dssp             TTCCEE
T ss_pred             ccCcEE
Confidence             46653


No 12 
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00  E-value=7.8e-51  Score=549.66  Aligned_cols=511  Identities=22%  Similarity=0.250  Sum_probs=437.2

Q ss_pred             CCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccc
Q 047591           97 PNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITG  176 (1624)
Q Consensus        97 ~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g  176 (1624)
                      ++++++. +|.   ..++|++|||++|++++..|..|..+++|++|||++|.+.+.++++.+.++++|++|+|++|++++
T Consensus        12 s~~~L~~-vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~   87 (844)
T 3j0a_A           12 RFCNLTQ-VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYF   87 (844)
T ss_dssp             SCCCSSC-CCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCE
T ss_pred             cCCCCCC-CCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcc
Confidence            4445544 555   457899999999999999999999999999999999988888988888999999999999999999


Q ss_pred             cCCccccCCCcccccccccccccccccCc--ccccccccceeccCCcCCCCCC-CcccccCccchheeccccccCCCCcc
Q 047591          177 QLPSSLGDCSKLKRLSVSFNELTGRIPQN--IGNLTELMELYLNGNNLQGEFP-PTIFNVSSLRVIVLANNSLFGSLPVD  253 (1624)
Q Consensus       177 ~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~--~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~ip~~  253 (1624)
                      ..|..|+++++|++|+|++|.+++.+|..  |+++++|++|+|++|++++..| ..|+++++|++|+|++|.+++..|..
T Consensus        88 ~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~  167 (844)
T 3j0a_A           88 LHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHE  167 (844)
T ss_dssp             ECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGG
T ss_pred             cCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHH
Confidence            99999999999999999999999888776  9999999999999999998765 57999999999999999999877765


Q ss_pred             ccccC--CCCcEeecccccccCcCCccccccCc------CCeeeccCCcccccCcccccccccccccc---CCCccEEEe
Q 047591          254 LCRRL--PSLQELNLRDCMTTGRIPKDIGNCTL------LNYLGLRDNQLTDFGANNLTGLIPSIIFN---NSNIEVIQL  322 (1624)
Q Consensus       254 ~~~~l--~~L~~L~Ls~N~l~g~ip~~~~~l~~------L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~---~~~L~~L~L  322 (1624)
                      + ..+  ++|+.|+|++|.+.+.+|..++.+.+      |+.|+|++|++.        +.+|..+..   ..+++.+++
T Consensus       168 l-~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~--------~~~~~~~~~~l~~~~l~~L~l  238 (844)
T 3j0a_A          168 L-EPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWT--------VDITGNFSNAISKSQAFSLIL  238 (844)
T ss_dssp             G-HHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSS--------TTTTSGGGGTSCSCCBSEEEC
T ss_pred             c-ccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCc--------hhHHHHHHhhcCcccccceec
Confidence            5 455  89999999999999999999888877      999999988654        444554443   357888888


Q ss_pred             ecccC---------CCCCCCcc-cccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCcccccccccccE
Q 047591          323 YGNHL---------SGNLPSST-GINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQI  392 (1624)
Q Consensus       323 s~N~l---------~g~ip~~~-~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~  392 (1624)
                      +.+.+         .+..+..+ +...++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|.++++|++
T Consensus       239 ~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~  318 (844)
T 3j0a_A          239 AHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQV  318 (844)
T ss_dssp             CSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCE
T ss_pred             ccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCE
Confidence            74433         22111111 112378999999999999999999999999999999999999999999999999999


Q ss_pred             EEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccE
Q 047591          393 LNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIA  472 (1624)
Q Consensus       393 L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~  472 (1624)
                      |+|++|++...       .+..+..+++|++|++++|.+.+..+..+..+. +|++|++++|.+++     +..+++|+.
T Consensus       319 L~Ls~N~l~~~-------~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~Ls~N~l~~-----i~~~~~L~~  385 (844)
T 3j0a_A          319 LNLSYNLLGEL-------YSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLE-KLQTLDLRDNALTT-----IHFIPSIPD  385 (844)
T ss_dssp             EEEESCCCSCC-------CSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCC-CCCEEEEETCCSCC-----CSSCCSCSE
T ss_pred             EECCCCCCCcc-------CHHHhcCCCCCCEEECCCCCCCccChhhhcCCC-CCCEEECCCCCCCc-----ccCCCCcch
Confidence            99999999642       234677889999999999999988888888886 89999999999985     333889999


Q ss_pred             EeccCCccCCCccchhccccccceecccccccccC-CCccccCCCCCceeecccccccCCCcc-ccccccCCccccccCc
Q 047591          473 LSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGS-IPSELCQLESLNTLLLQGNALQNQIPT-CLANLTSLRALNLSSN  550 (1624)
Q Consensus       473 L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~-iP~~l~~l~~L~~L~L~~N~l~g~iP~-~~~~l~~L~~L~Ls~N  550 (1624)
                      |++++|+++ .+|..   ..+++.|++++|++++. .+..++++++|+.|+|++|++++..+. .+..+++|+.|+|++|
T Consensus       386 L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N  461 (844)
T 3j0a_A          386 IFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGEN  461 (844)
T ss_dssp             EEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESC
T ss_pred             hccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCC
Confidence            999999998 56764   56899999999999963 234567899999999999999975543 4667899999999999


Q ss_pred             ccc-----ccCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCccccccCCccccccccccCCCC
Q 047591          551 RLN-----STIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQ  625 (1624)
Q Consensus       551 ~l~-----g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~  625 (1624)
                      +++     +..|..|..+++|+.|||++|++++.+|..++.+++|+.|+|++|+|++..|..+.  ++|+.|||++|+|+
T Consensus       462 ~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~  539 (844)
T 3j0a_A          462 MLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLL  539 (844)
T ss_dssp             CCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCC
T ss_pred             ccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCC
Confidence            997     55567789999999999999999999999999999999999999999986666665  89999999999999


Q ss_pred             CCCchhhhcccccc
Q 047591          626 GSIPEAIGSLISLE  639 (1624)
Q Consensus       626 g~iP~~~~~l~~L~  639 (1624)
                      |.+|..+.++..|.
T Consensus       540 ~~~~~~~~~L~~l~  553 (844)
T 3j0a_A          540 APNPDVFVSLSVLD  553 (844)
T ss_dssp             CCCSCCCSSCCEEE
T ss_pred             CCChhHhCCcCEEE
Confidence            99998876665544


No 13 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1.5e-51  Score=483.88  Aligned_cols=257  Identities=26%  Similarity=0.458  Sum_probs=213.4

Q ss_pred             CCCcCCeEeecCceEEEEEEEc------CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1336 GFSESNLLGTGIFSSVYKATFA------DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1336 ~f~~~~~lG~G~~G~Vyk~~~~------~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      +|...+.||+|+||+||+|++.      +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++|
T Consensus        14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV   93 (299)
T 4asz_A           14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV   93 (299)
T ss_dssp             GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            4556688999999999999874      4678999999876666778999999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEe
Q 047591         1410 LQYMPQGSLEKWLYSHN------------YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLG 1477 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~ 1477 (1624)
                      ||||++|+|.++|++.+            ..++|.++++|+.|||+||+|||+   ++||||||||+|||+|+++++||+
T Consensus        94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki~  170 (299)
T 4asz_A           94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIG  170 (299)
T ss_dssp             EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEEC
Confidence            99999999999998643            468999999999999999999996   799999999999999999999999


Q ss_pred             eecceeecCCCCCcc-ccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCC
Q 047591         1478 DFGIAKLLDGVDSMK-QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLP 1555 (1624)
Q Consensus      1478 DFGla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~ 1555 (1624)
                      |||+|+.....+... .....||++|||||++.++.|+.|+|||||||++|||+| |+.||.+....+. +.        
T Consensus       171 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~-~~--------  241 (299)
T 4asz_A          171 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV-IE--------  241 (299)
T ss_dssp             CCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HH--------
T ss_pred             CcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HH--------
Confidence            999998765433222 233579999999999999999999999999999999999 8999976432211 11        


Q ss_pred             hhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1556 DAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1556 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                          .+.......        .+..|+.++.+++.+||+.||++||||+|+++.|+++.+.
T Consensus       242 ----~i~~~~~~~--------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          242 ----CITQGRVLQ--------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             ----HHHHTCCCC--------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----HHHcCCCCC--------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence                111111111        1134677889999999999999999999999999988764


No 14 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=4.9e-51  Score=486.00  Aligned_cols=257  Identities=26%  Similarity=0.435  Sum_probs=207.2

Q ss_pred             CCCcCCeEeecCceEEEEEEEc------CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1336 GFSESNLLGTGIFSSVYKATFA------DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1336 ~f~~~~~lG~G~~G~Vyk~~~~------~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      +|...+.||+|+||+||+|++.      +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+||
T Consensus        42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV  121 (329)
T 4aoj_A           42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV  121 (329)
T ss_dssp             GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            3455678999999999999874      4678999999876666778999999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEE
Q 047591         1410 LQYMPQGSLEKWLYSHN--------------YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAH 1475 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~k 1475 (1624)
                      ||||++|+|.+++++.+              ..++|.++++|+.|||+||+|||+   .+||||||||+|||+|+++++|
T Consensus       122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~K  198 (329)
T 4aoj_A          122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVK  198 (329)
T ss_dssp             EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEE
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEE
Confidence            99999999999998642              358999999999999999999996   7899999999999999999999


Q ss_pred             EeeecceeecCCCCCc-cccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhc
Q 047591         1476 LGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEES 1553 (1624)
Q Consensus      1476 l~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~ 1553 (1624)
                      |+|||+|+.+...+.. ..+...||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+.         
T Consensus       199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~---------  269 (329)
T 4aoj_A          199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA---------  269 (329)
T ss_dssp             ECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH---------
T ss_pred             EcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH---------
Confidence            9999999976543322 2334679999999999999999999999999999999999 8999976432111         


Q ss_pred             CChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1554 LPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1554 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                           .+.+......       ..+..|+.++.+++.+||+.||++||||+||++.|+.+...
T Consensus       270 -----~~~i~~g~~~-------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          270 -----IDCITQGREL-------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             -----HHHHHHTCCC-------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             -----HHHHHcCCCC-------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence                 1111111000       01134677889999999999999999999999999998764


No 15 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=3.7e-51  Score=480.22  Aligned_cols=262  Identities=26%  Similarity=0.418  Sum_probs=207.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      +++...+.||+|+||+||+|++.+  .||||+++..  .....+.|.+|+++|++++|||||+++|+|.+ +..+|||||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy  112 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW  112 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence            455567889999999999998753  6999998643  34456889999999999999999999999864 568999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC-Cc
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD-SM 1491 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~-~~ 1491 (1624)
                      |++|+|.++|+.....++|.++++|+.|||+||+|||+   .+||||||||+|||+|+++++||+|||+|+...... ..
T Consensus       113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~  189 (307)
T 3omv_A          113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ  189 (307)
T ss_dssp             CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred             CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence            99999999999877789999999999999999999996   799999999999999999999999999998765332 22


Q ss_pred             cccccccccccccccccC---CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1492 KQTMTLATIGYMAPEYGS---EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~---~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                      .....+||+.|||||++.   .+.|+.|+|||||||++|||+||+.||.+....... ...+..            ....
T Consensus       190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~-~~~~~~------------~~~~  256 (307)
T 3omv_A          190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI-IFMVGR------------GYAS  256 (307)
T ss_dssp             ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HHHHHT------------TCCC
T ss_pred             eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHH-HHHHhc------------CCCC
Confidence            334568999999999875   346999999999999999999999999764322111 111111            1000


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      ...   ...+..|+..+.+++.+||+.+|++||||+||++.|+.++..+.
T Consensus       257 p~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          257 PDL---SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             CCS---TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             CCc---ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence            000   00113466778999999999999999999999999998876543


No 16 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=1e-50  Score=478.79  Aligned_cols=250  Identities=23%  Similarity=0.395  Sum_probs=206.8

Q ss_pred             CCeEeecCceEEEEEEEc------CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1340 SNLLGTGIFSSVYKATFA------DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1340 ~~~lG~G~~G~Vyk~~~~------~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      .+.||+|+||+||+|++.      +++.||||+++... ....++|.+|+.+|++++|||||+++|+|.+++..++||||
T Consensus        31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey  110 (308)
T 4gt4_A           31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY  110 (308)
T ss_dssp             EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence            467999999999999873      46789999986443 33457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEe
Q 047591         1413 MPQGSLEKWLYSHN---------------YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLG 1477 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~ 1477 (1624)
                      |++|||.++|+...               ..++|.++++|+.|||+||+|||+   .+||||||||+|||+|+++++||+
T Consensus       111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~~Ki~  187 (308)
T 4gt4_A          111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKIS  187 (308)
T ss_dssp             CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCCEEEC
Confidence            99999999997532               358999999999999999999996   789999999999999999999999


Q ss_pred             eecceeecCCCCCc-cccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCC
Q 047591         1478 DFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLP 1555 (1624)
Q Consensus      1478 DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~ 1555 (1624)
                      |||+|+.+...+.. ......||++|||||++.++.|+.++|||||||++|||+| |+.||.+....+  +         
T Consensus       188 DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~--~---------  256 (308)
T 4gt4_A          188 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD--V---------  256 (308)
T ss_dssp             CSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH--H---------
T ss_pred             CcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH--H---------
Confidence            99999976543322 2344679999999999999999999999999999999999 899997643211  1         


Q ss_pred             hhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 047591         1556 DAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKI 1613 (1624)
Q Consensus      1556 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i 1613 (1624)
                         .+.+......       +.+..|+..+.+++.+||+.||++||||+||++.|+.+
T Consensus       257 ---~~~i~~~~~~-------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          257 ---VEMIRNRQVL-------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             ---HHHHHTTCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             ---HHHHHcCCCC-------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence               1111111100       01235677899999999999999999999999999864


No 17 
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00  E-value=7.8e-50  Score=515.37  Aligned_cols=494  Identities=22%  Similarity=0.253  Sum_probs=355.7

Q ss_pred             CccceeeEecCCCCcEEEEecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccch
Q 047591           76 VCNWVGVTCGSRHGRVTDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFD  155 (1624)
Q Consensus        76 ~C~W~Gv~C~~~~~~v~~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~  155 (1624)
                      .|.|.|| |+..          +++++ ++|+.+.  ++|++|+|++|++++..|..|+.+++|++|+|++|++++ +++
T Consensus         3 ~C~~~~~-c~~~----------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~   67 (549)
T 2z81_A            3 SCDASGV-CDGR----------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINT-IEG   67 (549)
T ss_dssp             EECTTSE-EECT----------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCE-ECT
T ss_pred             cCCCCce-EECC----------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCc-cCh
Confidence            4999999 9643          23332 4565553  567777777777776666677776667766666666653 333


Q ss_pred             hhhccCCCcCEEEccCCcccccCCccccCCCcccccccccccccccccCcccccccccceeccCCcCCCCCCCcccccCc
Q 047591          156 DMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSS  235 (1624)
Q Consensus       156 ~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~  235 (1624)
                      +.+.++++|++|+|++|++++..|..|+++++|++|+|++|++++.                       .+|..++++++
T Consensus        68 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-----------------------~~~~~~~~l~~  124 (549)
T 2z81_A           68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTL-----------------------GVTSLFPNLTN  124 (549)
T ss_dssp             TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSS-----------------------CSSCSCTTCTT
T ss_pred             hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCccccc-----------------------chhhhhhccCC
Confidence            3344455555555555555544444444444444444444444431                       23444555555


Q ss_pred             cchheeccccccCCCCccccccCCCCcEeecccccccCcCCccccccCcCCeeeccCCcccccCcccccccccccc-ccC
Q 047591          236 LRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSII-FNN  314 (1624)
Q Consensus       236 L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~-~~~  314 (1624)
                      |++|++++|.+.+.+|...+..+++|++|++++|++++.+|..++.+++|+.|++++|.+..         +|..+ ..+
T Consensus       125 L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~---------~~~~~~~~l  195 (549)
T 2z81_A          125 LQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF---------LLEIFADIL  195 (549)
T ss_dssp             CCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT---------HHHHHHHST
T ss_pred             ccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccc---------cchhhHhhc
Confidence            55555555554445555555566667777777777777777777777778888777776432         34333 346


Q ss_pred             CCccEEEeecccCCCCC--CCcccccCCCccEEEecCCccCCcCcc----cccCCCCCcEEecCCccccccC------cc
Q 047591          315 SNIEVIQLYGNHLSGNL--PSSTGINLPNLLRLYLWGNNLSGVIPS----SICNASKLTVLELSRNLFSGLV------AN  382 (1624)
Q Consensus       315 ~~L~~L~Ls~N~l~g~i--p~~~~~~l~~L~~L~Ls~N~l~g~iP~----~~~~l~~L~~L~Ls~N~l~g~~------~~  382 (1624)
                      ++|++|+|++|++++..  |..+...+++|+.|++++|++++..+.    .+..+.+|+.|++++|.+.+..      ..
T Consensus       196 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~  275 (549)
T 2z81_A          196 SSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESD  275 (549)
T ss_dssp             TTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTT
T ss_pred             ccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchh
Confidence            78888888888887642  333444577888999999888876544    3456788899999999888753      23


Q ss_pred             cccccccccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCccc-CccccchhhccCCcccCCCCC
Q 047591          383 TFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVG-NLSKSLEYFYAGSCELGGGIP  461 (1624)
Q Consensus       383 ~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~-~l~~~L~~L~l~~n~l~g~ip  461 (1624)
                      .+..+.+|+.|++.++.+......  ...........+|+.|++++|.+. .+|..+. .+. +|++|++++|++.+.+|
T Consensus       276 ~~~~l~~L~~L~l~~~~i~~~~~~--~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~-~L~~L~Ls~N~l~~~~~  351 (549)
T 2z81_A          276 VVSELGKVETVTIRRLHIPQFYLF--YDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLK-SLEFLDLSENLMVEEYL  351 (549)
T ss_dssp             CCCCCTTCCEEEEESCBCSCGGGS--CCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCT-TCCEEECCSSCCCHHHH
T ss_pred             hhhhhcccccccccccccchhhhc--ccchhhhhhcccceEEEeccCccc-cCCHHHHhcCc-cccEEEccCCccccccc
Confidence            456778888898888876431100  001111233467889999999986 5776664 454 89999999999998774


Q ss_pred             ---CCcCCCCcccEEeccCCccCCCcc--chhccccccceecccccccccCCCccccCCCCCceeecccccccCCCcccc
Q 047591          462 ---AEFGNLSNIIALSLYQNQLASTIP--TTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCL  536 (1624)
Q Consensus       462 ---~~~~~l~~L~~L~L~~N~l~g~iP--~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~  536 (1624)
                         ..++.+++|++|+|++|++++..+  ..++.+++|++|||++|+++ .+|..+..+++|++|+|++|+++ .+|..+
T Consensus       352 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~  429 (549)
T 2z81_A          352 KNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI  429 (549)
T ss_dssp             HHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS
T ss_pred             cchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchh
Confidence               458899999999999999986533  56899999999999999999 79999999999999999999998 466555


Q ss_pred             ccccCCccccccCccccccCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCccccccCCccccc
Q 047591          537 ANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTY  616 (1624)
Q Consensus       537 ~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~  616 (1624)
                      .  ++|+.|+|++|++++.+    ..+++|+.|||++|+++ .||. .+.+++|+.|+|++|++++.+|..++.+++|+.
T Consensus       430 ~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~  501 (549)
T 2z81_A          430 P--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQK  501 (549)
T ss_dssp             C--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCE
T ss_pred             c--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCE
Confidence            3  68999999999999853    57889999999999998 6887 578999999999999999988889999999999


Q ss_pred             cccccCCCCCCCch
Q 047591          617 LALARNGFQGSIPE  630 (1624)
Q Consensus       617 L~ls~N~l~g~iP~  630 (1624)
                      |++++|++++..|.
T Consensus       502 L~l~~N~~~~~~~~  515 (549)
T 2z81_A          502 IWLHTNPWDCSCPR  515 (549)
T ss_dssp             EECCSSCBCCCHHH
T ss_pred             EEecCCCccCCCcc
Confidence            99999999999883


No 18 
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00  E-value=5.7e-49  Score=509.66  Aligned_cols=498  Identities=20%  Similarity=0.203  Sum_probs=421.9

Q ss_pred             CCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccC
Q 047591          105 IPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGD  184 (1624)
Q Consensus       105 ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~  184 (1624)
                      +|..+.  +++++|+|++|++++..|..|..+++|++|||++|++++ ++++.+.++++|++|+|++|++++..|..|++
T Consensus        22 ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~-i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~   98 (570)
T 2z63_A           22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSG   98 (570)
T ss_dssp             CCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred             cCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCc-cCcccccCchhCCEEeCcCCcCCccCHhhhcC
Confidence            555443  468999999999998888899999999999999999985 66777788999999999999999888889999


Q ss_pred             CCcccccccccccccccccCcccccccccceeccCCcCCC-CCCCcccccCccchheeccccccCCCCccccccCCCC--
Q 047591          185 CSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQG-EFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSL--  261 (1624)
Q Consensus       185 l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L--  261 (1624)
                      +++|++|++++|++++..+..|+++++|++|+|++|++++ .+|..++++++|++|++++|++++ ++...++.+++|  
T Consensus        99 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~  177 (570)
T 2z63_A           99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS-IYCTDLRVLHQMPL  177 (570)
T ss_dssp             CTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCE-ECGGGGHHHHTCTT
T ss_pred             ccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccce-ecHHHccchhccch
Confidence            9999999999999996555579999999999999999987 589999999999999999999985 444555677788  


Q ss_pred             --cEeecccccccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCC-----CCCCc
Q 047591          262 --QELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSG-----NLPSS  334 (1624)
Q Consensus       262 --~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g-----~ip~~  334 (1624)
                        +.|++++|.+++..|..+..+ +|+.|+|++|...       ...+|..+.++.+++.+++..+.+..     .++..
T Consensus       178 ~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~-------~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~  249 (570)
T 2z63_A          178 LNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDS-------LNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKS  249 (570)
T ss_dssp             CCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSC-------TTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTT
T ss_pred             hhhhcccCCCCceecCHHHhccC-cceeEeccccccc-------ccchhhhhcCccccceeeeccccccCchhhhhcchh
Confidence              899999999999888888776 7999999987432       12456677777888877766544332     22332


Q ss_pred             ccccCC--CccEEEecCC-ccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEccccccccCCCCCCccc
Q 047591          335 TGINLP--NLLRLYLWGN-NLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQSF  411 (1624)
Q Consensus       335 ~~~~l~--~L~~L~Ls~N-~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~  411 (1624)
                      .+..++  .++.+++++| .+.+.+|..+..+++|+.|++++|.+++ +|..+..+ +|++|++++|++...+       
T Consensus       250 ~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~~l~-------  320 (570)
T 2z63_A          250 ALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFGQFP-------  320 (570)
T ss_dssp             TTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCSSCC-------
T ss_pred             hhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-CccEEeeccCcccccC-------
Confidence            222222  3677888888 8888899999999999999999999985 56677888 9999999999886321       


Q ss_pred             ccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCC--CCCcCCCCcccEEeccCCccCCCccchhc
Q 047591          412 FSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGI--PAEFGNLSNIIALSLYQNQLASTIPTTVG  489 (1624)
Q Consensus       412 ~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~i--p~~~~~l~~L~~L~L~~N~l~g~iP~~~~  489 (1624)
                       .  ..+++|+.|++++|.+.+.++.  ..+. +|++|++++|++++..  |..+.++++|++|+|++|++++. |..+.
T Consensus       321 -~--~~l~~L~~L~l~~n~~~~~~~~--~~~~-~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~  393 (570)
T 2z63_A          321 -T--LKLKSLKRLTFTSNKGGNAFSE--VDLP-SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFL  393 (570)
T ss_dssp             -B--CBCSSCCEEEEESCBSCCBCCC--CBCT-TCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEE
T ss_pred             -c--ccccccCEEeCcCCcccccccc--ccCC-CCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-ccccc
Confidence             1  3567889999999998887765  4444 7899999999988664  77889999999999999999864 44599


Q ss_pred             cccccceecccccccccCCC-ccccCCCCCceeecccccccCCCccccccccCCccccccCcccc-ccCchhhccccccc
Q 047591          490 KLQNLQGLDLSYNNIQGSIP-SELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLN-STIPSTFWSLEYIL  567 (1624)
Q Consensus       490 ~l~~L~~L~Ls~N~l~g~iP-~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~-g~iP~~~~~l~~L~  567 (1624)
                      .+++|++|++++|++++..| ..+.++++|++|++++|++++.+|..+.++++|+.|+|++|+++ +.+|..+..+++|+
T Consensus       394 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~  473 (570)
T 2z63_A          394 GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT  473 (570)
T ss_dssp             TCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCC
T ss_pred             ccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCC
Confidence            99999999999999998776 57899999999999999999999999999999999999999998 68999999999999


Q ss_pred             eeecccccccCCCCcccccccccceeeccCCcCCCCccccccCCccccccccccCCCCCCCch
Q 047591          568 VVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPE  630 (1624)
Q Consensus       568 ~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~iP~  630 (1624)
                      .||+++|++++.+|.+++++++|+.|+|++|++++.+|..++++++|+.|++++|++++.+|.
T Consensus       474 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~  536 (570)
T 2z63_A          474 FLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR  536 (570)
T ss_dssp             EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred             EEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence            999999999998899999999999999999999998888899999999999999999999885


No 19 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=5.4e-49  Score=465.23  Aligned_cols=274  Identities=20%  Similarity=0.292  Sum_probs=201.7

Q ss_pred             CCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC----eeEEEEEe
Q 047591         1337 FSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG----FKALILQY 1412 (1624)
Q Consensus      1337 f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~----~~~lV~ey 1412 (1624)
                      +...+.||+|+||+||+|++ +|+.||||+++..... ...+.+|+..+.+++|||||+++|+|.+++    ..+|||||
T Consensus         5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey   82 (303)
T 3hmm_A            5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence            44567899999999999998 5899999999654322 223345666667899999999999997654    57999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-----YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~-----~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      |++|+|.++++..  .++|+++++|+.|+|+||+|||+.     +.++||||||||+|||+|+++++||+|||+|+....
T Consensus        83 ~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  160 (303)
T 3hmm_A           83 HEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS  160 (303)
T ss_dssp             CTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred             CCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence            9999999999865  489999999999999999999963     245999999999999999999999999999998764


Q ss_pred             CCCc---cccccccccccccccccCCC------CcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCC-hh
Q 047591         1488 VDSM---KQTMTLATIGYMAPEYGSEG------IVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLP-DA 1557 (1624)
Q Consensus      1488 ~~~~---~~~~~~gt~~y~APE~~~~~------~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~-~~ 1557 (1624)
                      ....   .....+||+.|||||++.+.      .++.|+|||||||++|||+||+.|+............+...... +.
T Consensus       161 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~  240 (303)
T 3hmm_A          161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE  240 (303)
T ss_dssp             TTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred             CCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHH
Confidence            3322   22345799999999987653      57889999999999999999988875432221111111110000 11


Q ss_pred             HHHHH-hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1558 VTDVI-DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1558 ~~~~~-d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      +...+ +..+....+..  ....+++..+.+++.+||+.||++||||.||++.|+++..+
T Consensus       241 ~~~~~~~~~~rp~~p~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          241 MRKVVCEQKLRPNIPNR--WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHTTSCCCCCCCGG--GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHhcccCCCCCCcc--ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            11111 11111111000  01124567789999999999999999999999999998753


No 20 
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00  E-value=1.7e-49  Score=519.34  Aligned_cols=461  Identities=20%  Similarity=0.289  Sum_probs=323.1

Q ss_pred             CcccEEEecCCCccccCCcccCCCCCCcEEEccCCCC------CC------ccchhhhccCCCcCEEEccCCcccccCCc
Q 047591          113 SFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRI------SG------NLFDDMCNSLTELESFDVSSNQITGQLPS  180 (1624)
Q Consensus       113 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l------~g------~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~  180 (1624)
                      .+++.|+|++|+++|.+|++++.|++|++|||++|.+      .|      .+|+..   +..|+ ++++.|.+.+.+|.
T Consensus        81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~---~~~l~-l~l~~~~l~~~~~~  156 (636)
T 4eco_A           81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ---KQKMR-MHYQKTFVDYDPRE  156 (636)
T ss_dssp             CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH---HHHHH-THHHHHHTCCCGGG
T ss_pred             CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH---HHHHH-hhHHHhhhccCchh
Confidence            4689999999999999999999999999999999987      22      233332   23344 55555555555554


Q ss_pred             cccC-CCcccccccccccccccccCcccccccccceecc--CCcCCCCCCCcccccCccchheeccccccCC--------
Q 047591          181 SLGD-CSKLKRLSVSFNELTGRIPQNIGNLTELMELYLN--GNNLQGEFPPTIFNVSSLRVIVLANNSLFGS--------  249 (1624)
Q Consensus       181 ~l~~-l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls--~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~--------  249 (1624)
                      .++. +..+..+++....+..      .....++.+++.  +|+++| +|.+++++++|++|+|++|+|+|.        
T Consensus       157 ~~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~  229 (636)
T 4eco_A          157 DFSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWEN  229 (636)
T ss_dssp             GSCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC
T ss_pred             hHHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccc
Confidence            4442 2333333433332221      112234444443  689999 999999999999999999999986        


Q ss_pred             ---------CCcccc-ccCCCCcEeecccccccCcCCccccccCcCCeeeccCCcccccCcccccc-ccccccccC----
Q 047591          250 ---------LPVDLC-RRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTG-LIPSIIFNN----  314 (1624)
Q Consensus       250 ---------ip~~~~-~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g-~ip~~~~~~----  314 (1624)
                               +|..+. .++++|++|+|++|++.|.+|+.|+++++|++|+|++|+       .++| .+|..++++    
T Consensus       230 ~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~-------~l~~~~lp~~~~~L~~~~  302 (636)
T 4eco_A          230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR-------GISGEQLKDDWQALADAP  302 (636)
T ss_dssp             TTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT-------TSCHHHHHHHHHHHHHSG
T ss_pred             cccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC-------CCccccchHHHHhhhccc
Confidence                     898763 389999999999999999999999999999999999875       1567 799998887    


Q ss_pred             --CCccEEEeecccCCCCCCC--cccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCccccccccc-
Q 047591          315 --SNIEVIQLYGNHLSGNLPS--STGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQ-  389 (1624)
Q Consensus       315 --~~L~~L~Ls~N~l~g~ip~--~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~-  389 (1624)
                        ++|++|+|++|+++ .+|.  .++ ++++|++|+|++|+++|.+| .|+++++|++|+|++|+++ .+|..|+++++ 
T Consensus       303 ~l~~L~~L~L~~n~l~-~ip~~~~l~-~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~  378 (636)
T 4eco_A          303 VGEKIQIIYIGYNNLK-TFPVETSLQ-KMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQ  378 (636)
T ss_dssp             GGGTCCEEECCSSCCS-SCCCHHHHT-TCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTT
T ss_pred             cCCCCCEEECCCCcCC-ccCchhhhc-cCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhccc
Confidence              99999999999999 8998  665 79999999999999999999 9999999999999999999 67788999999 


Q ss_pred             ccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCcc-ccchhhccCCcccCCCCCCCcC---
Q 047591          390 LQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLS-KSLEYFYAGSCELGGGIPAEFG---  465 (1624)
Q Consensus       390 L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~-~~L~~L~l~~n~l~g~ip~~~~---  465 (1624)
                      |++|+|++|+++.                                +|..+.... ..|++|++++|++.+.+|.+|.   
T Consensus       379 L~~L~Ls~N~l~~--------------------------------lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~  426 (636)
T 4eco_A          379 VENLSFAHNKLKY--------------------------------IPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLD  426 (636)
T ss_dssp             CCEEECCSSCCSS--------------------------------CCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTC
T ss_pred             CcEEEccCCcCcc--------------------------------cchhhhhcccCccCEEECcCCcCCCcchhhhcccc
Confidence            9999999888742                                222222211 1344555555555555555555   


Q ss_pred             ----CCCcccEEeccCCccCCCccch-hccccccceecccccccccCCCccccCCCCCceeecccccccCCCcccccccc
Q 047591          466 ----NLSNIIALSLYQNQLASTIPTT-VGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCLANLT  540 (1624)
Q Consensus       466 ----~l~~L~~L~L~~N~l~g~iP~~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~  540 (1624)
                          .+.+|++|+|++|+++ .+|.. +..+++|++|+|++|+++ .+|..+....                +..+.+++
T Consensus       427 ~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~----------------~~~~~~l~  488 (636)
T 4eco_A          427 PTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDE----------------NENFKNTY  488 (636)
T ss_dssp             SSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEET----------------TEECTTGG
T ss_pred             cccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccc----------------cccccccC
Confidence                4445555555555554 23332 223455555555555555 3443322111                00011122


Q ss_pred             CCccccccCccccccCchhhc--cccccceeecccccccCCCCcccccccccceeec------cCCcCCCCccccccCCc
Q 047591          541 SLRALNLSSNRLNSTIPSTFW--SLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYL------SGNQLSCSIPSSIGGLK  612 (1624)
Q Consensus       541 ~L~~L~Ls~N~l~g~iP~~~~--~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~L------s~N~l~g~iP~~~~~l~  612 (1624)
                      +|+.|+|++|+++ .+|..+.  .+++|+.|||++|++++ +|..++++++|+.|+|      ++|++.+.+|..+++++
T Consensus       489 ~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~  566 (636)
T 4eco_A          489 LLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP  566 (636)
T ss_dssp             GCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCS
T ss_pred             CccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCC
Confidence            5555555555555 4555554  55555555555555555 5666666666666666      78999999999999999


Q ss_pred             cccccccccCCCCCCCchhhhccccccCCCCCCCCCccc
Q 047591          613 DLTYLALARNGFQGSIPEAIGSLISLEKGEIPSGGPFVN  651 (1624)
Q Consensus       613 ~L~~L~ls~N~l~g~iP~~~~~l~~L~~~~i~~~~~~~~  651 (1624)
                      +|++|+|++|++ +.||..+.  ++|+...+ +++++..
T Consensus       567 ~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~L-s~N~l~~  601 (636)
T 4eco_A          567 SLTQLQIGSNDI-RKVNEKIT--PNISVLDI-KDNPNIS  601 (636)
T ss_dssp             SCCEEECCSSCC-CBCCSCCC--TTCCEEEC-CSCTTCE
T ss_pred             CCCEEECCCCcC-CccCHhHh--CcCCEEEC-cCCCCcc
Confidence            999999999999 78998754  56665444 3444443


No 21 
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.3e-47  Score=496.92  Aligned_cols=476  Identities=20%  Similarity=0.219  Sum_probs=398.2

Q ss_pred             CcEEEEecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEE
Q 047591           89 GRVTDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFD  168 (1624)
Q Consensus        89 ~~v~~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~  168 (1624)
                      .+++.|+|+++.+.+..+..|.++++|++|+|++|++++..|..|+.+++|++|+|++|++++ ++++.+..+++|++|+
T Consensus        28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~  106 (570)
T 2z63_A           28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS-LALGAFSGLSSLQKLV  106 (570)
T ss_dssp             SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE-ECTTTTTTCTTCCEEE
T ss_pred             ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCc-cCHhhhcCcccccccc
Confidence            468899999999999888899999999999999999998888899999999999999999985 6667778999999999


Q ss_pred             ccCCcccccCCccccCCCcccccccccccccc-cccCcccccccccceeccCCcCCCCCCCcccccCcc----chheecc
Q 047591          169 VSSNQITGQLPSSLGDCSKLKRLSVSFNELTG-RIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSL----RVIVLAN  243 (1624)
Q Consensus       169 Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L----~~L~L~~  243 (1624)
                      +++|++++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..|..++.+++|    +.|++++
T Consensus       107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~  186 (570)
T 2z63_A          107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL  186 (570)
T ss_dssp             CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred             ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence            99999997666689999999999999999997 589999999999999999999998888899999999    8999999


Q ss_pred             ccccCCCCccccccCCCCcEeecccccccC-cCCccccccCcCCeeeccCCcc------cc------------------c
Q 047591          244 NSLFGSLPVDLCRRLPSLQELNLRDCMTTG-RIPKDIGNCTLLNYLGLRDNQL------TD------------------F  298 (1624)
Q Consensus       244 N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l------~~------------------l  298 (1624)
                      |.+++ ++...+..+ +|++|++++|.... .+|..++.++.|+.+++.-+.+      ..                  +
T Consensus       187 n~l~~-~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l  264 (570)
T 2z63_A          187 NPMNF-IQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL  264 (570)
T ss_dssp             CCCCE-ECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred             CCcee-cCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence            99985 455566554 89999999985432 3444455555554443321111      01                  1


Q ss_pred             Ccc-ccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCcccc
Q 047591          299 GAN-NLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFS  377 (1624)
Q Consensus       299 ~~n-~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~  377 (1624)
                      ..+ .+.+.+|..+..+.+|+.|++++|.++ .+|..+. .+ +|++|++++|++. .+|.  ..+++|+.|++++|.+.
T Consensus       265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~-~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~  338 (570)
T 2z63_A          265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSY-NF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGG  338 (570)
T ss_dssp             EETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCS-CC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSC
T ss_pred             hcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhc-cC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCccc
Confidence            111 567778899999999999999999998 6888876 56 9999999999999 6676  57889999999999999


Q ss_pred             ccCcccccccccccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccC
Q 047591          378 GLVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELG  457 (1624)
Q Consensus       378 g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~  457 (1624)
                      +..+.  ..+++|++|++++|+++...     ..+..+..+++|++|++++|.+.                         
T Consensus       339 ~~~~~--~~~~~L~~L~l~~n~l~~~~-----~~~~~~~~~~~L~~L~l~~n~l~-------------------------  386 (570)
T 2z63_A          339 NAFSE--VDLPSLEFLDLSRNGLSFKG-----CCSQSDFGTTSLKYLDLSFNGVI-------------------------  386 (570)
T ss_dssp             CBCCC--CBCTTCCEEECCSSCCBEEE-----EEEHHHHTCSCCCEEECCSCSEE-------------------------
T ss_pred             ccccc--ccCCCCCEEeCcCCccCccc-----cccccccccCccCEEECCCCccc-------------------------
Confidence            87776  88999999999999886411     01233455566666666665543                         


Q ss_pred             CCCCCCcCCCCcccEEeccCCccCCCcc-chhccccccceecccccccccCCCccccCCCCCceeeccccccc-CCCccc
Q 047591          458 GGIPAEFGNLSNIIALSLYQNQLASTIP-TTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQ-NQIPTC  535 (1624)
Q Consensus       458 g~ip~~~~~l~~L~~L~L~~N~l~g~iP-~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~-g~iP~~  535 (1624)
                      +..+ .+..+++|++|++++|++++..| ..+..+++|++|+|++|++++.+|..+.++++|+.|+|++|+++ +.+|..
T Consensus       387 ~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~  465 (570)
T 2z63_A          387 TMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI  465 (570)
T ss_dssp             EEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSC
T ss_pred             cccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhh
Confidence            3223 37778889999999999988766 57888999999999999999888999999999999999999998 678999


Q ss_pred             cccccCCccccccCccccccCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCccc
Q 047591          536 LANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPS  606 (1624)
Q Consensus       536 ~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~  606 (1624)
                      ++.+++|+.|+|++|++++..|..|..+++|+.|++++|++++.+|..++++++|+.|+|++|+++|.+|.
T Consensus       466 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~  536 (570)
T 2z63_A          466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR  536 (570)
T ss_dssp             CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred             hhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence            99999999999999999998899999999999999999999998888899999999999999999998775


No 22 
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00  E-value=2.2e-48  Score=516.18  Aligned_cols=443  Identities=19%  Similarity=0.224  Sum_probs=326.8

Q ss_pred             CcccEEEecCCCccccCCcccCCCCCCcEEEc-cCCCCCCccchhhhcc---CCCcC--EE---------E-ccCCcccc
Q 047591          113 SFLVSLNISGNRFHGTLPNELWLMPRLRIIDL-SSNRISGNLFDDMCNS---LTELE--SF---------D-VSSNQITG  176 (1624)
Q Consensus       113 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L-s~N~l~g~~~~~~~~~---l~~L~--~L---------~-Ls~N~l~g  176 (1624)
                      .+++.|+|++|+++|.+|++|+.|++|++||| ++|.++|..|-.....   +..++  .+         + .....+++
T Consensus       323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~  402 (876)
T 4ecn_A          323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD  402 (876)
T ss_dssp             SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred             CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence            56899999999999999999999999999999 9999988644321110   00000  00         0 00011111


Q ss_pred             -----------cCCccccCCCccccccccc--ccccccccCcccccccccceeccCCcCCC-----------------CC
Q 047591          177 -----------QLPSSLGDCSKLKRLSVSF--NELTGRIPQNIGNLTELMELYLNGNNLQG-----------------EF  226 (1624)
Q Consensus       177 -----------~iP~~l~~l~~L~~L~Ls~--N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-----------------~~  226 (1624)
                                 ..+........++.+.++.  |+++| ||..|++|++|++|+|++|+|+|                 .+
T Consensus       403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i  481 (876)
T 4ecn_A          403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE  481 (876)
T ss_dssp             HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred             HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence                       1122223445566666665  99998 99999999999999999999999                 49


Q ss_pred             CCccc--ccCccchheeccccccCCCCccccccCCCCcEeeccccc-ccC-cCCccccccC-------cCCeeeccCCcc
Q 047591          227 PPTIF--NVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCM-TTG-RIPKDIGNCT-------LLNYLGLRDNQL  295 (1624)
Q Consensus       227 p~~~~--~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~-l~g-~ip~~~~~l~-------~L~~L~Ls~N~l  295 (1624)
                      |+.++  ++++|++|+|++|++.|.+|..+ .++++|++|+|++|+ ++| .+|..+++++       +|+.|+|++|++
T Consensus       482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l-~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L  560 (876)
T 4ecn_A          482 NEELSWSNLKDLTDVELYNCPNMTQLPDFL-YDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL  560 (876)
T ss_dssp             TSCCCGGGCTTCCEEEEESCTTCCSCCGGG-GGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred             ChhhhhccCCCCCEEECcCCCCCccChHHH-hCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence            99988  99999999999999999999654 689999999999998 999 9999988887       999999998875


Q ss_pred             cccCcccccccccc--ccccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCC-CcEEecC
Q 047591          296 TDFGANNLTGLIPS--IIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASK-LTVLELS  372 (1624)
Q Consensus       296 ~~l~~n~l~g~ip~--~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~-L~~L~Ls  372 (1624)
                      .         .||.  .+.++++|+.|+|++|+++ .+| .+ ..+++|+.|+|++|+++ .+|..++++++ |+.|+|+
T Consensus       561 ~---------~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~-~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls  627 (876)
T 4ecn_A          561 E---------EFPASASLQKMVKLGLLDCVHNKVR-HLE-AF-GTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFS  627 (876)
T ss_dssp             C---------BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CC-CTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECC
T ss_pred             C---------ccCChhhhhcCCCCCEEECCCCCcc-cch-hh-cCCCcceEEECcCCccc-cchHHHhhccccCCEEECc
Confidence            4         4788  8999999999999999999 999 44 48999999999999999 89999999999 9999999


Q ss_pred             CccccccCccccccccc--ccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhc
Q 047591          373 RNLFSGLVANTFGNCRQ--LQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFY  450 (1624)
Q Consensus       373 ~N~l~g~~~~~f~~l~~--L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~  450 (1624)
                      +|.|+ .+|..|..++.  |+.|+|++|++...                               +|.             
T Consensus       628 ~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~-------------------------------ip~-------------  662 (876)
T 4ecn_A          628 HNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSE-------------------------------GRN-------------  662 (876)
T ss_dssp             SSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTT-------------------------------SSS-------------
T ss_pred             CCCCC-cCchhhhccccCCCCEEECcCCcCCCc-------------------------------ccc-------------
Confidence            99999 66788888765  99999999888531                               111             


Q ss_pred             cCCcccCCCCCCCcC--CCCcccEEeccCCccCCCccchhc-cccccceecccccccccCCCccccCCC--------CCc
Q 047591          451 AGSCELGGGIPAEFG--NLSNIIALSLYQNQLASTIPTTVG-KLQNLQGLDLSYNNIQGSIPSELCQLE--------SLN  519 (1624)
Q Consensus       451 l~~n~l~g~ip~~~~--~l~~L~~L~L~~N~l~g~iP~~~~-~l~~L~~L~Ls~N~l~g~iP~~l~~l~--------~L~  519 (1624)
                               +|..++  .+.+|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|+ .+|..+....        +|+
T Consensus       663 ---------l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~  731 (876)
T 4ecn_A          663 ---------ISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLT  731 (876)
T ss_dssp             ---------CSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCC
T ss_pred             ---------chhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCcc
Confidence                     001111  1224555555555554 3333332 4455555555555555 4444333221        555


Q ss_pred             eeecccccccCCCccccc--cccCCccccccCccccccCchhhccccccceeec------ccccccCCCCcccccccccc
Q 047591          520 TLLLQGNALQNQIPTCLA--NLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDF------SLNLLSGCLPQDIGNLKVLT  591 (1624)
Q Consensus       520 ~L~L~~N~l~g~iP~~~~--~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldL------s~N~l~g~iP~~l~~l~~L~  591 (1624)
                      .|+|++|+|+ .+|..+.  .+++|+.|+|++|++++ +|..++.+++|+.|+|      ++|++.+.+|..++++++|+
T Consensus       732 ~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~  809 (876)
T 4ecn_A          732 TIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLI  809 (876)
T ss_dssp             EEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCC
T ss_pred             EEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCC
Confidence            5555555555 4555554  55555555555555554 4555555555555555      55999999999999999999


Q ss_pred             eeeccCCcCCCCccccccCCccccccccccCCCCCCCchh
Q 047591          592 GLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEA  631 (1624)
Q Consensus       592 ~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~iP~~  631 (1624)
                      .|+|++|++ +.||..+.  ++|+.|||++|++...-+..
T Consensus       810 ~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~  846 (876)
T 4ecn_A          810 QLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTS  846 (876)
T ss_dssp             EEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGG
T ss_pred             EEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHH
Confidence            999999999 79999987  69999999999997544443


No 23 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=2.8e-48  Score=465.87  Aligned_cols=266  Identities=21%  Similarity=0.360  Sum_probs=216.1

Q ss_pred             HHHHHHHhCCCCcCCeEeecCceEEEEEEEcC------CceEEEEEeccch-hhHHHHHHHHHHHHHhcCC-CceeEEEe
Q 047591         1327 YQELRLATNGFSESNLLGTGIFSSVYKATFAD------GTNAAIKIFSLQE-DRALKSFDAECEVMRRIRH-RNLAKIVS 1398 (1624)
Q Consensus      1327 ~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~~------~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~H-pNIv~l~g 1398 (1624)
                      .++++...++|...+.||+|+||+||+|++..      ++.||||+++... ....+.|.+|+++|++++| ||||+++|
T Consensus        56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g  135 (353)
T 4ase_A           56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG  135 (353)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence            34555666788888999999999999998743      3579999986433 3456789999999999965 89999999


Q ss_pred             eeccC-CeeEEEEEecCCCCHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCC
Q 047591         1399 SCSNP-GFKALILQYMPQGSLEKWLYSH---------------NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLK 1462 (1624)
Q Consensus      1399 ~~~~~-~~~~lV~ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK 1462 (1624)
                      +|.++ +..++|||||++|+|.++|++.               ...++|.+++.|+.|||+||+|||+   ++|||||||
T Consensus       136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK  212 (353)
T 4ase_A          136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLA  212 (353)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred             EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccC
Confidence            99765 5689999999999999999853               2348999999999999999999996   799999999


Q ss_pred             CCcEEecCCCcEEEeeecceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCC
Q 047591         1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMF 1540 (1624)
Q Consensus      1463 ~~NILld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~ 1540 (1624)
                      |+|||+++++++||+|||+|+.+..... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+..
T Consensus       213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~  292 (353)
T 4ase_A          213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  292 (353)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999999997754332 23345679999999999999999999999999999999998 899997653


Q ss_pred             ccchhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 047591         1541 TGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKT 1615 (1624)
Q Consensus      1541 ~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~ 1615 (1624)
                      ..+...             ..+.......       .+..|+.++.+++.+||+.||++||||+|++++|+++..
T Consensus       293 ~~~~~~-------------~~i~~g~~~~-------~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          293 IDEEFC-------------RRLKEGTRMR-------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             CSHHHH-------------HHHHHTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHH-------------HHHHcCCCCC-------CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence            322211             1111111000       112356678999999999999999999999999998754


No 24 
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00  E-value=2.2e-47  Score=489.12  Aligned_cols=455  Identities=22%  Similarity=0.210  Sum_probs=345.1

Q ss_pred             cEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCccccccccc
Q 047591          116 VSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSF  195 (1624)
Q Consensus       116 ~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~  195 (1624)
                      ++||+++|+++ .+|..+.  ++|++|||++|++++ +++..+.++++|++|+|++|++++..|..|+++++|++|||++
T Consensus         3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~   78 (520)
T 2z7x_B            3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISE-LWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH   78 (520)
T ss_dssp             CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCC-CCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred             ceEecCCCCcc-ccccccc--ccccEEECCCCcccc-cChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence            47889999998 6888776  889999999999885 5555667899999999999999988888999999999999999


Q ss_pred             ccccccccCcccccccccceeccCCcCCC-CCCCcccccCccchheeccccccCCCCccccccCCCC--cEeecccccc-
Q 047591          196 NELTGRIPQNIGNLTELMELYLNGNNLQG-EFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSL--QELNLRDCMT-  271 (1624)
Q Consensus       196 N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L--~~L~Ls~N~l-  271 (1624)
                      |+++ .+|..  .+++|++|+|++|++++ .+|..++++++|++|+|++|.+++    ..+..+++|  ++|++++|.+ 
T Consensus        79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~  151 (520)
T 2z7x_B           79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETY  151 (520)
T ss_dssp             SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTT
T ss_pred             Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeeccccc
Confidence            9998 68877  89999999999999987 588999999999999999999875    234667788  9999999999 


Q ss_pred             -cCcCCccccccCc-CCeeeccCCcccccCcccccccccc-ccccCCCccEEEeeccc-------CCCCCCCcccccCCC
Q 047591          272 -TGRIPKDIGNCTL-LNYLGLRDNQLTDFGANNLTGLIPS-IIFNNSNIEVIQLYGNH-------LSGNLPSSTGINLPN  341 (1624)
Q Consensus       272 -~g~ip~~~~~l~~-L~~L~Ls~N~l~~l~~n~l~g~ip~-~~~~~~~L~~L~Ls~N~-------l~g~ip~~~~~~l~~  341 (1624)
                       .+.+|..+..++. ...+++++|        .+.+.+|. .+.++.+|+.|++++|.       +.|.+| .+ ..+++
T Consensus       152 ~~~~~~~~l~~l~~~~l~l~l~~n--------~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l-~~l~~  221 (520)
T 2z7x_B          152 GEKEDPEGLQDFNTESLHIVFPTN--------KEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KL-QTNPK  221 (520)
T ss_dssp             TSSCCTTTTTTCCEEEEEEECCSS--------SCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GG-GGCTT
T ss_pred             ccccccccccccccceEEEEeccC--------cchhhhhhhhhhcccceeeccccccccccccceeecchh-hh-ccccc
Confidence             8888888887763 223444444        34444443 44566777777777776       666665 23 25777


Q ss_pred             ccEEEecCCccCCcCccccc---CCCCCcEEecCCccccccCcccc-----cccccccEEEccccccccCCCCCCccccc
Q 047591          342 LLRLYLWGNNLSGVIPSSIC---NASKLTVLELSRNLFSGLVANTF-----GNCRQLQILNLAYSQLATGSLSQGQSFFS  413 (1624)
Q Consensus       342 L~~L~Ls~N~l~g~iP~~~~---~l~~L~~L~Ls~N~l~g~~~~~f-----~~l~~L~~L~L~~N~l~~~~~~~~~~~~~  413 (1624)
                      |+.|++++|++++..+..+.   ..++|++|++++|+++|.+|..+     +++++|+.+++++|.+ .  ++.     .
T Consensus       222 L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~--~p~-----~  293 (520)
T 2z7x_B          222 LSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-G--FPQ-----S  293 (520)
T ss_dssp             CCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-C--SCT-----H
T ss_pred             hhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-e--cch-----h
Confidence            77777777777664333222   13577777777777777777766     6777777777776665 1  110     1


Q ss_pred             ccccc---cccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEeccCCccCCCccchhcc
Q 047591          414 SLTNC---RYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGK  490 (1624)
Q Consensus       414 ~l~~l---~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~iP~~~~~  490 (1624)
                      .+..+   .+|+.|++++|.                         +.+..  .+..+++|++|+|++|++++.+|..++.
T Consensus       294 ~~~~~~~~~~L~~L~l~~n~-------------------------l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~  346 (520)
T 2z7x_B          294 YIYEIFSNMNIKNFTVSGTR-------------------------MVHML--CPSKISPFLHLDFSNNLLTDTVFENCGH  346 (520)
T ss_dssp             HHHHHHHTCCCSEEEEESSC-------------------------CCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCC
T ss_pred             hhhcccccCceeEEEcCCCc-------------------------ccccc--chhhCCcccEEEeECCccChhhhhhhcc
Confidence            11111   334555555544                         33211  1256778888888888888888888888


Q ss_pred             ccccceeccccccccc--CCCccccCCCCCceeecccccccCCCccc-cccccCCccccccCccccccCchhhccccccc
Q 047591          491 LQNLQGLDLSYNNIQG--SIPSELCQLESLNTLLLQGNALQNQIPTC-LANLTSLRALNLSSNRLNSTIPSTFWSLEYIL  567 (1624)
Q Consensus       491 l~~L~~L~Ls~N~l~g--~iP~~l~~l~~L~~L~L~~N~l~g~iP~~-~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~  567 (1624)
                      +++|++|+|++|++++  .+|..++++++|++|+|++|++++.+|.. +..+++|+.|+|++|++++.+|..+.  ++|+
T Consensus       347 l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~  424 (520)
T 2z7x_B          347 LTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIK  424 (520)
T ss_dssp             CSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCC
T ss_pred             CCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCC
Confidence            8888888888888886  56677888888888888888888767664 77888888888888888888777665  6788


Q ss_pred             eeecccccccCCCCcccccccccceeeccCCcCCCCcccc-ccCCccccccccccCCCCCCCch
Q 047591          568 VVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSS-IGGLKDLTYLALARNGFQGSIPE  630 (1624)
Q Consensus       568 ~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~-~~~l~~L~~L~ls~N~l~g~iP~  630 (1624)
                      .||+++|+++ .+|.++..+++|+.|+|++|+++ .+|.. +..+++|++|++++|++++..+.
T Consensus       425 ~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~  486 (520)
T 2z7x_B          425 VLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR  486 (520)
T ss_dssp             EEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred             EEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCc
Confidence            8999999988 78988889999999999999999 57776 88899999999999999987663


No 25 
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1.3e-47  Score=455.38  Aligned_cols=249  Identities=23%  Similarity=0.299  Sum_probs=206.9

Q ss_pred             CCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEecC
Q 047591         1336 GFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMP 1414 (1624)
Q Consensus      1336 ~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~~ 1414 (1624)
                      .|...+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|+++|++++|||||++++++.+++..|||||||+
T Consensus        75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~  154 (346)
T 4fih_A           75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE  154 (346)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence            4677788999999999999885 689999999976655556778999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcccc
Q 047591         1415 QGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT 1494 (1624)
Q Consensus      1415 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 1494 (1624)
                      +|+|.+++.+.  .+++++...|+.||+.||+|||+   .+||||||||+|||+++++++||+|||+|+.+.... ....
T Consensus       155 gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~~  228 (346)
T 4fih_A          155 GGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRK  228 (346)
T ss_dssp             TEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCBC
T ss_pred             CCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCC-Cccc
Confidence            99999999764  48899999999999999999996   799999999999999999999999999999875432 2334


Q ss_pred             ccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHHH
Q 047591         1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEAD 1574 (1624)
Q Consensus      1495 ~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 1574 (1624)
                      ..+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+ .+.. +....+.        .+ .      
T Consensus       229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~-i~~~~~~--------~~-~------  291 (346)
T 4fih_A          229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKM-IRDNLPP--------RL-K------  291 (346)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHH-HHHSSCC--------CC-S------
T ss_pred             ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHH-HHcCCCC--------CC-C------
Confidence            5689999999999999999999999999999999999999997532111 1111 1111000        00 0      


Q ss_pred             HHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1575 IAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1575 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                        .+..++..+.+++.+||+.||++|||++|+++.
T Consensus       292 --~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          292 --NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             --CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             --ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence              012345678899999999999999999999863


No 26 
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00  E-value=4.1e-47  Score=489.94  Aligned_cols=485  Identities=17%  Similarity=0.179  Sum_probs=386.9

Q ss_pred             CccceeeEecC--CCCcEEEEecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCcc
Q 047591           76 VCNWVGVTCGS--RHGRVTDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNL  153 (1624)
Q Consensus        76 ~C~W~Gv~C~~--~~~~v~~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~  153 (1624)
                      -|++.+++.-.  ...+++.|+|+++.+++..|..+.++++|++|+|++|++++..|..|+.+++|++|||++|++++ +
T Consensus        11 ~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~-~   89 (549)
T 2z81_A           11 DGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSS-L   89 (549)
T ss_dssp             ECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCS-C
T ss_pred             ECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCc-c
Confidence            35566665432  22578999999999999999999999999999999999999889999999999999999999996 5


Q ss_pred             chhhhccCCCcCEEEccCCcccc-cCCccccCCCccccccccccccccccc-CcccccccccceeccCCcCCCCCCCccc
Q 047591          154 FDDMCNSLTELESFDVSSNQITG-QLPSSLGDCSKLKRLSVSFNELTGRIP-QNIGNLTELMELYLNGNNLQGEFPPTIF  231 (1624)
Q Consensus       154 ~~~~~~~l~~L~~L~Ls~N~l~g-~iP~~l~~l~~L~~L~Ls~N~l~g~ip-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~  231 (1624)
                      ++..++++++|++|+|++|++++ .+|..++++++|++|++++|++.+.+| ..|+++++|++|+|++|++++.+|..++
T Consensus        90 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~  169 (549)
T 2z81_A           90 SSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLK  169 (549)
T ss_dssp             CHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTT
T ss_pred             CHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhh
Confidence            66667899999999999999997 578899999999999999999666776 5899999999999999999999999999


Q ss_pred             ccCccchheeccccccCCCCccccccCCCCcEeecccccccCcC--Cc-cccccCcCCeeeccCCcccccCccccccccc
Q 047591          232 NVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRI--PK-DIGNCTLLNYLGLRDNQLTDFGANNLTGLIP  308 (1624)
Q Consensus       232 ~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~i--p~-~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip  308 (1624)
                      ++++|++|+++.|.+. .+|...+..+++|++|++++|++++..  |. ....+++|+.|++++|++.+...    ..++
T Consensus       170 ~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~----~~l~  244 (549)
T 2z81_A          170 SIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESF----NELL  244 (549)
T ss_dssp             TCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHH----HHHH
T ss_pred             ccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHH----HHHH
Confidence            9999999999999985 678777778999999999999999853  22 33568899999999887654221    1244


Q ss_pred             cccccCCCccEEEeecccCCCC--CCC---cccccCCCccEEEecCCccCCc-----CcccccCCCCCcEEecCCccccc
Q 047591          309 SIIFNNSNIEVIQLYGNHLSGN--LPS---STGINLPNLLRLYLWGNNLSGV-----IPSSICNASKLTVLELSRNLFSG  378 (1624)
Q Consensus       309 ~~~~~~~~L~~L~Ls~N~l~g~--ip~---~~~~~l~~L~~L~Ls~N~l~g~-----iP~~~~~l~~L~~L~Ls~N~l~g  378 (1624)
                      ..+..+.+|+.+++++|.+.|.  ++.   .....+++|+.|++.+|.+...     ++..+..+.+|+.|++++|.++.
T Consensus       245 ~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~  324 (549)
T 2z81_A          245 KLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFL  324 (549)
T ss_dssp             GGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCC
T ss_pred             HHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCcccc
Confidence            5556778999999999998763  111   1123577888999988876532     22233445678888888888875


Q ss_pred             cCcccccccccccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCC
Q 047591          379 LVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGG  458 (1624)
Q Consensus       379 ~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g  458 (1624)
                      .+...+.++++|++|+|++|++......    ....+..+++|++|++++|+++                         +
T Consensus       325 ip~~~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~~~~l~~L~~L~Ls~N~l~-------------------------~  375 (549)
T 2z81_A          325 VPCSFSQHLKSLEFLDLSENLMVEEYLK----NSACKGAWPSLQTLVLSQNHLR-------------------------S  375 (549)
T ss_dssp             CCHHHHHHCTTCCEEECCSSCCCHHHHH----HHTCTTSSTTCCEEECTTSCCC-------------------------C
T ss_pred             CCHHHHhcCccccEEEccCCcccccccc----chhhhhccccCcEEEccCCccc-------------------------c
Confidence            5544456788888888888877531000    0112344455555555555543                         3


Q ss_pred             CCC--CCcCCCCcccEEeccCCccCCCccchhccccccceecccccccccCCCccccCCCCCceeecccccccCCCcccc
Q 047591          459 GIP--AEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCL  536 (1624)
Q Consensus       459 ~ip--~~~~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~  536 (1624)
                      ..+  ..++.+++|++|+|++|+++ .+|..++.+++|++|+|++|+++ .+|..+.  ++|+.|+|++|++++.+    
T Consensus       376 ~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----  447 (549)
T 2z81_A          376 MQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----  447 (549)
T ss_dssp             HHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----
T ss_pred             cccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----
Confidence            221  34677889999999999998 68888888999999999999988 4665543  68999999999998743    


Q ss_pred             ccccCCccccccCccccccCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCcc
Q 047591          537 ANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIP  605 (1624)
Q Consensus       537 ~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP  605 (1624)
                      +++++|++|+|++|+++ .+|. ...+++|+.|||++|++++.+|..++.+++|+.|+|++|+++|.+|
T Consensus       448 ~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~  514 (549)
T 2z81_A          448 LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP  514 (549)
T ss_dssp             CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred             ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence            57889999999999998 6776 5678999999999999999888899999999999999999999887


No 27 
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1.2e-47  Score=456.42  Aligned_cols=250  Identities=22%  Similarity=0.358  Sum_probs=201.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||+++..  .....+.|.+|+++|++++|||||++++++.+++..|+|||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            57888899999999999999875 6899999998643  33456789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1412 YMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||++|+|.++|...+ ..+++.+...|+.||+.||+|||+   .+||||||||+|||+++++.+||+|||+|+.+.... 
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-  179 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-  179 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence            999999999998653 457888899999999999999996   899999999999999999999999999999764321 


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                      ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+ .+........+            .. 
T Consensus       180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~~~------------~~-  245 (350)
T 4b9d_A          180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-LVLKIISGSFP------------PV-  245 (350)
T ss_dssp             HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCC------------CC-
T ss_pred             ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCCCC------------CC-
Confidence            12234679999999999999999999999999999999999999997532211 11111111111            00 


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                             +..++..+.+++.+||+.||++|||++|+++.
T Consensus       246 -------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          246 -------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             -------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -------CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                   11245567899999999999999999999863


No 28 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=2.1e-47  Score=452.45  Aligned_cols=254  Identities=21%  Similarity=0.254  Sum_probs=205.5

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      +.|...+.||+|+||+||+|+.. +|+.||||+++.+.     .+.+|+++|++++|||||++++++.+++..|||||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  132 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL  132 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            45666778999999999999875 68999999997432     2257999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCC-cEEEeeecceeecCCCCCc-
Q 047591         1414 PQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSM- 1491 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~-~~kl~DFGla~~~~~~~~~- 1491 (1624)
                      ++|+|.+++++.+ .+++.+...|+.||+.||+|||+   .+||||||||+|||++.++ ++||+|||+|+.+...... 
T Consensus       133 ~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~  208 (336)
T 4g3f_A          133 EGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK  208 (336)
T ss_dssp             TTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred             CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence            9999999998654 58999999999999999999995   8999999999999999988 6999999999987543211 


Q ss_pred             ---cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1492 ---KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1492 ---~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                         .....+||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+.. ....... +.         .. 
T Consensus       209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~-~~i~~~~-~~---------~~-  276 (336)
T 4g3f_A          209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC-LKIASEP-PP---------IR-  276 (336)
T ss_dssp             -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH-HHHHHSC-CG---------GG-
T ss_pred             ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH-HHHHcCC-CC---------ch-
Confidence               122357999999999999999999999999999999999999999764333221 1111110 00         00 


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                             ..+..++..+.+++.+||+.||++|||+.|+++.|.+....
T Consensus       277 -------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~  317 (336)
T 4g3f_A          277 -------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE  317 (336)
T ss_dssp             -------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence                   01123556788999999999999999999999998876554


No 29 
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=4.1e-47  Score=442.78  Aligned_cols=245  Identities=24%  Similarity=0.368  Sum_probs=194.8

Q ss_pred             cCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeecc----CCeeEEEEE
Q 047591         1339 ESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSN----PGFKALILQ 1411 (1624)
Q Consensus      1339 ~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~----~~~~~lV~e 1411 (1624)
                      ..+.||+|+||+||+|++. ++..||||++...  .....+.|.+|+++|++++|||||+++++|.+    ++..+||||
T Consensus        30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE  109 (290)
T 3fpq_A           30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE  109 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence            3457999999999999875 5888999998643  23456789999999999999999999999864    345799999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC-CCcEEEeeecceeecCCCCC
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD-DMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~-~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||++|+|.+++++. ..+++..+..|+.||+.||+|||+. .++||||||||+|||++. ++.+||+|||+|+.....  
T Consensus       110 y~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~--  185 (290)
T 3fpq_A          110 LMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--  185 (290)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT--
T ss_pred             CCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC--
Confidence            99999999999865 3589999999999999999999962 234999999999999984 799999999999865322  


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                       .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+................+..             
T Consensus       186 -~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~-------------  250 (290)
T 3fpq_A          186 -FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS-------------  250 (290)
T ss_dssp             -SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGG-------------
T ss_pred             -ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCC-------------
Confidence             2345689999999998864 6999999999999999999999999754322111111111111100             


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                            .+..+++++.+++.+||+.||++|||++|+++
T Consensus       251 ------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          251 ------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                  01123456788999999999999999999986


No 30 
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00  E-value=2.8e-47  Score=488.06  Aligned_cols=461  Identities=20%  Similarity=0.253  Sum_probs=381.5

Q ss_pred             EEecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCC
Q 047591           93 DLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSN  172 (1624)
Q Consensus        93 ~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N  172 (1624)
                      .+++++++++ .+|+.+.  ++|++|+|++|++++..|..|..+++|++|+|++|++++ ++++.+.++++|++|||++|
T Consensus         4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N   79 (520)
T 2z7x_B            4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQY-LDISVFKFNQELEYLDLSHN   79 (520)
T ss_dssp             EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCE-EEGGGGTTCTTCCEEECCSS
T ss_pred             eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCC-cChHHhhcccCCCEEecCCC
Confidence            4788899998 5888777  899999999999998778899999999999999999986 44556688999999999999


Q ss_pred             cccccCCccccCCCcccccccccccccc-cccCcccccccccceeccCCcCCCCCCCcccccCcc--chheeccccc--c
Q 047591          173 QITGQLPSSLGDCSKLKRLSVSFNELTG-RIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSL--RVIVLANNSL--F  247 (1624)
Q Consensus       173 ~l~g~iP~~l~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--~~L~L~~N~l--~  247 (1624)
                      +|+ .+|..  .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++   ..+..+++|  ++|+|++|.+  +
T Consensus        80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~  153 (520)
T 2z7x_B           80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE  153 (520)
T ss_dssp             CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred             cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence            999 57777  89999999999999987 578999999999999999999986   467778888  9999999999  7


Q ss_pred             CCCCccccccCC-CCcEeecccccccCcCCc-cccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeecc
Q 047591          248 GSLPVDLCRRLP-SLQELNLRDCMTTGRIPK-DIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGN  325 (1624)
Q Consensus       248 g~ip~~~~~~l~-~L~~L~Ls~N~l~g~ip~-~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N  325 (1624)
                      +.+|..+ ..+. +...+++++|.+.+.+++ .+.++++|+.|++++|+.. .....+.|.+| .+..+.+|+.|++++|
T Consensus       154 ~~~~~~l-~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~~~~~~~-~l~~l~~L~~L~l~~~  230 (520)
T 2z7x_B          154 KEDPEGL-QDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLED-NKCSYFLSILA-KLQTNPKLSNLTLNNI  230 (520)
T ss_dssp             SCCTTTT-TTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCST-TTTHHHHHHHH-GGGGCTTCCEEEEEEE
T ss_pred             ccccccc-cccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccc-cccceeecchh-hhccccchhhcccccc
Confidence            7777554 2333 344678889998887765 5778999999999887521 11223667777 7888999999999999


Q ss_pred             cCCCCCCCccc--ccCCCccEEEecCCccCCcCcccc-----cCCCCCcEEecCCccccccCccccccc---ccccEEEc
Q 047591          326 HLSGNLPSSTG--INLPNLLRLYLWGNNLSGVIPSSI-----CNASKLTVLELSRNLFSGLVANTFGNC---RQLQILNL  395 (1624)
Q Consensus       326 ~l~g~ip~~~~--~~l~~L~~L~Ls~N~l~g~iP~~~-----~~l~~L~~L~Ls~N~l~g~~~~~f~~l---~~L~~L~L  395 (1624)
                      .+++..+..+.  ...++|++|++++|+++|.+|..+     +++++|+.+++++|.+ ..++..+..+   .+|+.|++
T Consensus       231 ~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l  309 (520)
T 2z7x_B          231 ETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTV  309 (520)
T ss_dssp             EEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEE
T ss_pred             ccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEc
Confidence            98865333221  124689999999999999999998     8999999999999999 4433566666   67999999


Q ss_pred             cccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEec
Q 047591          396 AYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSL  475 (1624)
Q Consensus       396 ~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L  475 (1624)
                      ++|++.....         ...++                         .|++|++++|++++.+|.+++++++|++|+|
T Consensus       310 ~~n~l~~~~~---------~~~l~-------------------------~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L  355 (520)
T 2z7x_B          310 SGTRMVHMLC---------PSKIS-------------------------PFLHLDFSNNLLTDTVFENCGHLTELETLIL  355 (520)
T ss_dssp             ESSCCCCCCC---------CSSCC-------------------------CCCEEECCSSCCCTTTTTTCCCCSSCCEEEC
T ss_pred             CCCccccccc---------hhhCC-------------------------cccEEEeECCccChhhhhhhccCCCCCEEEc
Confidence            9998854211         02233                         4555666666666777888889999999999


Q ss_pred             cCCccCC--CccchhccccccceecccccccccCCCcc-ccCCCCCceeecccccccCCCccccccccCCccccccCccc
Q 047591          476 YQNQLAS--TIPTTVGKLQNLQGLDLSYNNIQGSIPSE-LCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRL  552 (1624)
Q Consensus       476 ~~N~l~g--~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~-l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l  552 (1624)
                      ++|++++  .+|..++.+++|++|+|++|++++.+|.. +..+++|+.|+|++|++++.+|..+.  ++|+.|+|++|++
T Consensus       356 ~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l  433 (520)
T 2z7x_B          356 QMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKI  433 (520)
T ss_dssp             CSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCC
T ss_pred             cCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCcc
Confidence            9999997  67788999999999999999999878875 78899999999999999998888776  7899999999999


Q ss_pred             cccCchhhccccccceeecccccccCCCCcc-cccccccceeeccCCcCCCCcc
Q 047591          553 NSTIPSTFWSLEYILVVDFSLNLLSGCLPQD-IGNLKVLTGLYLSGNQLSCSIP  605 (1624)
Q Consensus       553 ~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~-l~~l~~L~~L~Ls~N~l~g~iP  605 (1624)
                      + .+|..+..+++|+.||+++|+++ .+|.. +..+++|+.|+|++|+++|..+
T Consensus       434 ~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~  485 (520)
T 2z7x_B          434 K-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP  485 (520)
T ss_dssp             C-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred             c-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence            8 78998889999999999999999 47776 9999999999999999999765


No 31 
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=2.3e-46  Score=455.40  Aligned_cols=250  Identities=23%  Similarity=0.298  Sum_probs=207.5

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      +.|...+.||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||+++++|.+++..|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            45777889999999999999885 68999999997665555677899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCccc
Q 047591         1414 PQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQ 1493 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 1493 (1624)
                      ++|+|.++++..  .+++.+...|+.||+.||+|||+   .+||||||||+||||+.++.+||+|||+|+.+.... ...
T Consensus       231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~  304 (423)
T 4fie_A          231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR  304 (423)
T ss_dssp             TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CCB
T ss_pred             CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-ccc
Confidence            999999999754  47899999999999999999996   799999999999999999999999999999875432 234


Q ss_pred             cccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHH
Q 047591         1494 TMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEA 1573 (1624)
Q Consensus      1494 ~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 1573 (1624)
                      ...+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....+ .+.. +....+        ..+.      
T Consensus       305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~-i~~~~~--------~~~~------  368 (423)
T 4fie_A          305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKM-IRDNLP--------PRLK------  368 (423)
T ss_dssp             CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHH-HHHSCC--------CCCS------
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHH-HHcCCC--------CCCc------
Confidence            45689999999999999999999999999999999999999997532111 1111 111100        0000      


Q ss_pred             HHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1574 DIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1574 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                         .+..++..+.+++.+||+.||++|||++|+++.
T Consensus       369 ---~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          369 ---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             ---CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence               012345567899999999999999999999863


No 32 
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=8.4e-47  Score=441.88  Aligned_cols=248  Identities=25%  Similarity=0.336  Sum_probs=205.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc---hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...++||+|+||+||+|+.. +|+.||||+++..   .....+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            45888899999999999999875 6899999999643   2334678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      |||++|+|.+++.+.+ .+++.+...|+.||+.||+|||+   .+||||||||+|||+++++.+||+|||+|+.+.....
T Consensus       112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~  187 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK  187 (311)
T ss_dssp             CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred             ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence            9999999999998654 57888889999999999999996   8999999999999999999999999999998754332


Q ss_pred             -ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1491 -MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1491 -~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                       ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+ .....            ...... -
T Consensus       188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~i------------~~~~~~-~  253 (311)
T 4aw0_A          188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL-IFAKI------------IKLEYD-F  253 (311)
T ss_dssp             CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH------------HHTCCC-C
T ss_pred             cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH------------HcCCCC-C
Confidence             23445689999999999999999999999999999999999999997532111 11111            111110 0


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                              +...+.++.+++.+|++.||++|||++|+..
T Consensus       254 --------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          254 --------PEKFFPKARDLVEKLLVLDATKRLGCEEMEG  284 (311)
T ss_dssp             --------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred             --------CcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence                    0123456788999999999999999998753


No 33 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2e-45  Score=424.74  Aligned_cols=246  Identities=22%  Similarity=0.371  Sum_probs=189.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc---hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||+++..   .....++|.+|+++|++++|||||++++++.+++..++||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            57888899999999999999874 6899999998643   2334578999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||| +|+|.+++.+.+ .+++.+...|+.||+.||+|||+   .+||||||||+|||+++++++||+|||+|+...... 
T Consensus        93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-  166 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-  166 (275)
T ss_dssp             ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred             eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence            999 689999998654 58899999999999999999996   799999999999999999999999999998765332 


Q ss_pred             ccccccccccccccccccCCCCc-CcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~-~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                       .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.+.... ......            .... ..-
T Consensus       167 -~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~-~~~~~i------------~~~~-~~~  231 (275)
T 3hyh_A          167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNI------------SNGV-YTL  231 (275)
T ss_dssp             ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH------------HHTC-CCC
T ss_pred             -ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHH------------HcCC-CCC
Confidence             2334689999999999887765 68999999999999999999999753211 111111            1100 000


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                              +..++..+.+++.+|++.||++|||++|+++.
T Consensus       232 --------p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          232 --------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             --------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             --------CCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence                    01234567889999999999999999999863


No 34 
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00  E-value=1.6e-44  Score=473.62  Aligned_cols=494  Identities=22%  Similarity=0.204  Sum_probs=353.1

Q ss_pred             cccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCccccccc
Q 047591          114 FLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSV  193 (1624)
Q Consensus       114 ~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L  193 (1624)
                      .+++|||++|+|++..|.+|..+++|++|||++|+|++ ++++.|.+|++|++|+|++|+|++..|..|++|++|++|+|
T Consensus        53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~-i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L  131 (635)
T 4g8a_A           53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA  131 (635)
T ss_dssp             TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred             CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCC-cChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence            56777777777776556667777777777777777763 56666667777777777777777655566777777777777


Q ss_pred             ccccccccccCcccccccccceeccCCcCCC-CCCCcccccCccchheeccccccCCCCccccccCCCC----cEeeccc
Q 047591          194 SFNELTGRIPQNIGNLTELMELYLNGNNLQG-EFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSL----QELNLRD  268 (1624)
Q Consensus       194 s~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L----~~L~Ls~  268 (1624)
                      ++|++++..|..|+++++|++|+|++|++++ .+|..++++++|++|+|++|++++..| ..+..+.++    ..++++.
T Consensus       132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~L~~l~~~~~~~~ls~  210 (635)
T 4g8a_A          132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC-TDLRVLHQMPLLNLSLDLSL  210 (635)
T ss_dssp             TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG-GGGHHHHTCTTCCCEEECTT
T ss_pred             CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccc-ccccchhhhhhhhhhhhccc
Confidence            7777775555567777777777777777764 356666777777777777777764333 333333332    3566677


Q ss_pred             ccccCcCCccccccCcCCeeeccCCcccc-----------------------cCccccccccccccccCCCccEEEeecc
Q 047591          269 CMTTGRIPKDIGNCTLLNYLGLRDNQLTD-----------------------FGANNLTGLIPSIIFNNSNIEVIQLYGN  325 (1624)
Q Consensus       269 N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~-----------------------l~~n~l~g~ip~~~~~~~~L~~L~Ls~N  325 (1624)
                      |.++...|..+ ....++.|++++|...-                       .....+....+..+.....+...++..+
T Consensus       211 n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~  289 (635)
T 4g8a_A          211 NPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA  289 (635)
T ss_dssp             CCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEE
T ss_pred             CcccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhh
Confidence            76665444333 33345566666553210                       0011122222333344445555555544


Q ss_pred             cCCCC---CCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEcccccccc
Q 047591          326 HLSGN---LPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLAT  402 (1624)
Q Consensus       326 ~l~g~---ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~  402 (1624)
                      .....   ++.. +..+.+++.+++.+|.+....  .+....+|+.|++++|.+.+..+.   .+..|+.+++..|.+..
T Consensus       290 ~~~~~~~~~~~~-~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~  363 (635)
T 4g8a_A          290 YLDYYLDGIIDL-FNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGN  363 (635)
T ss_dssp             CCCSCEEECTTT-TGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCC
T ss_pred             hhcccccchhhh-hhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCC
Confidence            43221   1111 224667888888888877543  355667888999999988877654   45677788888887643


Q ss_pred             CCCCCCcccccccccccccceeeeccCCCCc--cCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEeccCCcc
Q 047591          403 GSLSQGQSFFSSLTNCRYLRYLAIQTNPWKG--ILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQL  480 (1624)
Q Consensus       403 ~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g--~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l  480 (1624)
                               ......+++|+++++++|.+..  ..+..+..+. +++++++..|...+ ++..+..+++|+.++++.|+.
T Consensus       364 ---------~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~-~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~  432 (635)
T 4g8a_A          364 ---------AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTI-SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNL  432 (635)
T ss_dssp             ---------BCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCS-CCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEE
T ss_pred             ---------Ccccccccccccchhhccccccccccccchhhhh-hhhhhhcccccccc-ccccccccccccchhhhhccc
Confidence                     1233467889999999998854  3444444544 78888888888765 456788899999999998887


Q ss_pred             CCCcc-chhccccccceecccccccccCCCccccCCCCCceeeccccccc-CCCccccccccCCccccccCccccccCch
Q 047591          481 ASTIP-TTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQ-NQIPTCLANLTSLRALNLSSNRLNSTIPS  558 (1624)
Q Consensus       481 ~g~iP-~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~-g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~  558 (1624)
                      ....+ ..+..+.+|+.++++.|++++..|..+..+++|+.|+|++|++. +.+|..|..+++|+.|+|++|+|++.+|.
T Consensus       433 ~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~  512 (635)
T 4g8a_A          433 KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT  512 (635)
T ss_dssp             ESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChH
Confidence            76554 46788999999999999999888989999999999999999854 45788899999999999999999998899


Q ss_pred             hhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCccccccCC-ccccccccccCCCCCC
Q 047591          559 TFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGL-KDLTYLALARNGFQGS  627 (1624)
Q Consensus       559 ~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l-~~L~~L~ls~N~l~g~  627 (1624)
                      .|.++++|+.|+|++|+|++..|..++.+++|+.|||++|+|++.+|..+..+ ++|++|+|++|+++..
T Consensus       513 ~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~  582 (635)
T 4g8a_A          513 AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT  582 (635)
T ss_dssp             TTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred             HHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence            99999999999999999999888889999999999999999999999999888 6899999999999864


No 35 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=5.2e-45  Score=429.03  Aligned_cols=247  Identities=23%  Similarity=0.365  Sum_probs=186.6

Q ss_pred             CCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC---------
Q 047591         1336 GFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG--------- 1404 (1624)
Q Consensus      1336 ~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~--------- 1404 (1624)
                      +|...+.||+|+||+||+|+.. +|+.||||+++... +...++|.+|+++|++++|||||++++++.+.+         
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            4777889999999999999875 68999999986543 345678999999999999999999999986543         


Q ss_pred             ---eeEEEEEecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeee
Q 047591         1405 ---FKALILQYMPQGSLEKWLYSHNY--LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDF 1479 (1624)
Q Consensus      1405 ---~~~lV~ey~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DF 1479 (1624)
                         ..|+|||||++|+|.+++.+...  ..++...+.|+.||+.||+|||+   .+||||||||+|||++.++++||+||
T Consensus        86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DF  162 (299)
T 4g31_A           86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDF  162 (299)
T ss_dssp             -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred             CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccC
Confidence               36899999999999999986542  35677788999999999999996   79999999999999999999999999


Q ss_pred             cceeecCCCCCc-----------cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhh
Q 047591         1480 GIAKLLDGVDSM-----------KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKH 1548 (1624)
Q Consensus      1480 Gla~~~~~~~~~-----------~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~ 1548 (1624)
                      |+|+.+......           ..+..+||+.|||||++.+..|+.++|||||||++|||++   ||.........+..
T Consensus       163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~  239 (299)
T 4g31_A          163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTD  239 (299)
T ss_dssp             CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHH
T ss_pred             ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHH
Confidence            999987543211           1234579999999999999999999999999999999996   76431100000000


Q ss_pred             hhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1549 WVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1549 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      ......|                    .......+...+++.+||+.||++|||+.|+++
T Consensus       240 ~~~~~~p--------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          240 VRNLKFP--------------------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHTTCCC--------------------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HhcCCCC--------------------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0000111                    011222345677999999999999999999986


No 36 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=7.3e-46  Score=434.16  Aligned_cols=247  Identities=27%  Similarity=0.322  Sum_probs=194.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc----CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA----DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKAL 1408 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~----~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~l 1408 (1624)
                      ++|...+.||+|+||+||+|+..    .++.||||+++...  .....++.+|+++|++++|||||++++++.+++..|+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            35778899999999999999763    36789999986432  2234578899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC
Q 047591         1409 ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      |||||++|+|.+++.+.+ .+++.+...|+.||+.||+|||+   .+||||||||+|||+++++++||+|||+|+.....
T Consensus       104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  179 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH  179 (304)
T ss_dssp             EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred             EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence            999999999999998654 57889999999999999999996   79999999999999999999999999999876433


Q ss_pred             CCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1489 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                      . ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+ .+...            ..... .
T Consensus       180 ~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i------------~~~~~-~  244 (304)
T 3ubd_A          180 E-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE-TMTMI------------LKAKL-G  244 (304)
T ss_dssp             --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH------------HHCCC-C
T ss_pred             C-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH-HHHHH------------HcCCC-C
Confidence            2 23345689999999999999999999999999999999999999997532211 11111            11110 0


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMN-----VKDALA 1608 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt-----~~evl~ 1608 (1624)
                      .        +..++.++.+++.+||+.||++|||     ++|+++
T Consensus       245 ~--------p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          245 M--------PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             C--------CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             C--------CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            0        1124456788999999999999998     456654


No 37 
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00  E-value=7.3e-45  Score=469.97  Aligned_cols=466  Identities=21%  Similarity=0.240  Sum_probs=285.3

Q ss_pred             EEEecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccC
Q 047591           92 TDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSS  171 (1624)
Q Consensus        92 ~~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~  171 (1624)
                      ..++++++++++ +|..+.  ++|++|+|++|++++..|..|..+++|++|+|++|+|++ ++++.+..+++|++|||++
T Consensus        34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~  109 (562)
T 3a79_B           34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS-LDFHVFLFNQDLEYLDVSH  109 (562)
T ss_dssp             CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCE-ECTTTTTTCTTCCEEECTT
T ss_pred             cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCc-CCHHHhCCCCCCCEEECCC
Confidence            557777778775 777664  778888888888887666788888888888888888874 4455566778888888888


Q ss_pred             CcccccCCccccCCCcccccccccccccc-cccCcccccccccceeccCCcCCCCCCCcccccCcc--chheeccccc--
Q 047591          172 NQITGQLPSSLGDCSKLKRLSVSFNELTG-RIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSL--RVIVLANNSL--  246 (1624)
Q Consensus       172 N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--~~L~L~~N~l--  246 (1624)
                      |+|+ .+|..  .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++.   .+..+++|  ++|+|++|++  
T Consensus       110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~  183 (562)
T 3a79_B          110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI  183 (562)
T ss_dssp             SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred             CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence            8877 56666  67788888888888775 3456777778888888888777752   34444555  7777777777  


Q ss_pred             cCCCCccccccCC-CCcEeecccccccCcCCc-cccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeec
Q 047591          247 FGSLPVDLCRRLP-SLQELNLRDCMTTGRIPK-DIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYG  324 (1624)
Q Consensus       247 ~g~ip~~~~~~l~-~L~~L~Ls~N~l~g~ip~-~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~  324 (1624)
                      ++..|..+. .+. +.-.+++++|.+.+.+++ .+..+++|+.|++++|+..   ...+.+.+ ..+..+.+|+.++|++
T Consensus       184 ~~~~~~~l~-~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~---~~~l~~~~-~~l~~l~~L~~L~L~~  258 (562)
T 3a79_B          184 KGGETESLQ-IPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDEN---CQRLMTFL-SELTRGPTLLNVTLQH  258 (562)
T ss_dssp             CSSSCCEEE-ECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTT---HHHHHHHH-HHHHSCSSCEEEEEEE
T ss_pred             cccCccccc-ccCcceEEEEecCccchhhhhhhcccccceEEEecccccccc---cchHHHHH-HHHhccCcceEEEecC
Confidence            665554432 222 122456667766665554 3455666777776666411   11122222 2344455555555555


Q ss_pred             ccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCcccc-----cccccccEEEccccc
Q 047591          325 NHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTF-----GNCRQLQILNLAYSQ  399 (1624)
Q Consensus       325 N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f-----~~l~~L~~L~L~~N~  399 (1624)
                      |.+++.                    .+.+ +|..+ ...+|++|++++|.++|.+|..+     .+++.|+.++++.|.
T Consensus       259 ~~l~~~--------------------~~~~-~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~  316 (562)
T 3a79_B          259 IETTWK--------------------CSVK-LFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQV  316 (562)
T ss_dssp             EEECHH--------------------HHHH-HHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECC
T ss_pred             CcCcHH--------------------HHHH-HHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhcccce
Confidence            544432                    1111 11111 12244555555555554444443     444444444444443


Q ss_pred             cccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEeccCCc
Q 047591          400 LATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQ  479 (1624)
Q Consensus       400 l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~  479 (1624)
                      + .  ++  ...+..+....+|++|++++|.+....                           ..+.+++|++|+|++|+
T Consensus       317 ~-~--~p--~~~~~~~~~~~~L~~L~l~~n~~~~~~---------------------------~~~~l~~L~~L~l~~n~  364 (562)
T 3a79_B          317 F-L--FS--KEALYSVFAEMNIKMLSISDTPFIHMV---------------------------CPPSPSSFTFLNFTQNV  364 (562)
T ss_dssp             C-S--SC--HHHHHHHHHTCCCSEEEEESSCCCCCC---------------------------CCSSCCCCCEEECCSSC
T ss_pred             e-e--cC--hhhhhhhhccCcceEEEccCCCccccc---------------------------CccCCCCceEEECCCCc
Confidence            3 0  00  000000111123444455544432110                           01455666666777776


Q ss_pred             cCCCccchhccccccceeccccccccc--CCCccccCCCCCceeecccccccCCCcc-ccccccCCccccccCccccccC
Q 047591          480 LASTIPTTVGKLQNLQGLDLSYNNIQG--SIPSELCQLESLNTLLLQGNALQNQIPT-CLANLTSLRALNLSSNRLNSTI  556 (1624)
Q Consensus       480 l~g~iP~~~~~l~~L~~L~Ls~N~l~g--~iP~~l~~l~~L~~L~L~~N~l~g~iP~-~~~~l~~L~~L~Ls~N~l~g~i  556 (1624)
                      +++.+|..++.+++|++|+|++|++++  .+|..+.++++|+.|+|++|++++.+|. .+..+++|+.|+|++|++++.+
T Consensus       365 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~  444 (562)
T 3a79_B          365 FTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV  444 (562)
T ss_dssp             CCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGG
T ss_pred             cccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcch
Confidence            666666666666777777777777665  2345566677777777777777764554 3666777777777777777666


Q ss_pred             chhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCcccc-ccCCccccccccccCCCCCCCch
Q 047591          557 PSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSS-IGGLKDLTYLALARNGFQGSIPE  630 (1624)
Q Consensus       557 P~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~-~~~l~~L~~L~ls~N~l~g~iP~  630 (1624)
                      |..+.  .+|+.|||++|+++ .||..+..+++|+.|+|++|+++ .+|.. +..+++|+.|++++|++++..|.
T Consensus       445 ~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~  515 (562)
T 3a79_B          445 FRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPG  515 (562)
T ss_dssp             GSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred             hhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence            65554  56777777777777 57777778888888888888888 56666 77888888888888888877664


No 38 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=6.3e-45  Score=427.51  Aligned_cols=202  Identities=29%  Similarity=0.459  Sum_probs=176.9

Q ss_pred             CCCCCcceeecCCccceEEEEec------CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP------YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      ++|...+.||+|+||+||+|++.      +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..|+
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            45667789999999999999863      478899999986666667889999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEE
Q 047591          818 ILEYMPQGSLEKWLYSHK------------YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHL  885 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl  885 (1624)
                      |||||++|+|.++|+..+            ..++|.++++|+.|||+||+|||+.   +||||||||+|||+|+++++||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence            999999999999997642            3689999999999999999999984   5999999999999999999999


Q ss_pred             EeeeeeeccCCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          886 SDFGISKLLDGEDSVT-QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       886 ~DFGla~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      +|||+|+.....+... .....||+.|||||++..+.++.++|||||||++|||+| |+.||...
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~  234 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL  234 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999765443322 233469999999999999999999999999999999999 89999764


No 39 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=1.9e-44  Score=429.37  Aligned_cols=201  Identities=29%  Similarity=0.456  Sum_probs=170.0

Q ss_pred             CCCCcceeecCCccceEEEEec------CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          745 GFSESNLIGAGSFGSVYKATLP------YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       745 ~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      +|...+.||+|+||+||+|++.      +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..|+|
T Consensus        42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV  121 (329)
T 4aoj_A           42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV  121 (329)
T ss_dssp             GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            4556688999999999999864      4789999999866556678899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceE
Q 047591          819 LEYMPQGSLEKWLYSHK--------------YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAH  884 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~k  884 (1624)
                      ||||++|+|.++++...              ..++|.++++|+.|||+||+|||+.   +||||||||+|||+|+++++|
T Consensus       122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~K  198 (329)
T 4aoj_A          122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVK  198 (329)
T ss_dssp             EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEE
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEE
Confidence            99999999999997642              3589999999999999999999984   599999999999999999999


Q ss_pred             EEeeeeeeccCCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          885 LSDFGISKLLDGEDSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       885 l~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      |+|||+|+.....+.. ..+...||+.|||||++....++.++|||||||++|||+| |+.||...
T Consensus       199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~  264 (329)
T 4aoj_A          199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL  264 (329)
T ss_dssp             ECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS
T ss_pred             EcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC
Confidence            9999999976544322 2334579999999999999999999999999999999999 89999764


No 40 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=2.9e-44  Score=421.69  Aligned_cols=199  Identities=28%  Similarity=0.459  Sum_probs=168.7

Q ss_pred             CCCCCcceeecCCccceEEEEecCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          744 DGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      ++|...+.||+|+||+||+|++.  ..||||+++...  ....+.|.+|+++|++++|||||+++|+|.+ +..|+||||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy  112 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW  112 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence            45667789999999999999875  469999987443  3345789999999999999999999999875 457999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC-c
Q 047591          822 MPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS-V  900 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~-~  900 (1624)
                      |++|+|.++|+.....++|.++++|+.|||+||+|||+.   +||||||||+|||+|+++.+||+|||+|+....... .
T Consensus       113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~  189 (307)
T 3omv_A          113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ  189 (307)
T ss_dssp             CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred             CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence            999999999988777899999999999999999999984   599999999999999999999999999997654322 2


Q ss_pred             ccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          901 TQTMTLATFGYMAPEYGS---EGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       901 ~~~~~~gt~~Y~aPE~~~---~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      .....+||+.|||||++.   .+.|+.|+|||||||++|||+||+.||...
T Consensus       190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~  240 (307)
T 3omv_A          190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI  240 (307)
T ss_dssp             ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCC
Confidence            234457999999999874   346899999999999999999999999754


No 41 
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00  E-value=1.2e-43  Score=458.66  Aligned_cols=439  Identities=19%  Similarity=0.245  Sum_probs=353.5

Q ss_pred             CcEEEEecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEE
Q 047591           89 GRVTDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFD  168 (1624)
Q Consensus        89 ~~v~~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~  168 (1624)
                      .+++.|+|+++.+.+..|..|.++++|++|+|++|++++..|..|+.+++|++|||++|+|+ .+|..   .+++|++|+
T Consensus        52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~---~l~~L~~L~  127 (562)
T 3a79_B           52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC---PMASLRHLD  127 (562)
T ss_dssp             TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC---CCTTCSEEE
T ss_pred             CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc---ccccCCEEE
Confidence            57899999999999988889999999999999999999988999999999999999999998 67766   799999999


Q ss_pred             ccCCcccc-cCCccccCCCcccccccccccccccccCcccccccc--cceeccCCcC--CCCCCCcccccC--ccchhee
Q 047591          169 VSSNQITG-QLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTEL--MELYLNGNNL--QGEFPPTIFNVS--SLRVIVL  241 (1624)
Q Consensus       169 Ls~N~l~g-~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L--~~L~Ls~N~l--~g~~p~~~~~l~--~L~~L~L  241 (1624)
                      |++|++++ .+|..|+++++|++|+|++|++++   ..+..+++|  ++|+|++|++  ++..|..+.++.  .| .+++
T Consensus       128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l  203 (562)
T 3a79_B          128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVF  203 (562)
T ss_dssp             CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEE
T ss_pred             CCCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEe
Confidence            99999997 567899999999999999999986   346666666  9999999999  999999998865  44 5689


Q ss_pred             ccccccCCCCccccccCCCCcEeeccccc-----ccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCCC
Q 047591          242 ANNSLFGSLPVDLCRRLPSLQELNLRDCM-----TTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSN  316 (1624)
Q Consensus       242 ~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~-----l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~  316 (1624)
                      ++|.+.+.++...+..+++|+.|++++|+     +.+.+ +.+..+++|+.|+|++|.+.   .|.+.+..+. + ...+
T Consensus       204 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~-~~l~~l~~L~~L~L~~~~l~---~~~~~~~~~~-~-~~~~  277 (562)
T 3a79_B          204 HPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL-SELTRGPTLLNVTLQHIETT---WKCSVKLFQF-F-WPRP  277 (562)
T ss_dssp             CSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHH-HHHHSCSSCEEEEEEEEEEC---HHHHHHHHHH-H-TTSS
T ss_pred             cCccchhhhhhhcccccceEEEecccccccccchHHHHH-HHHhccCcceEEEecCCcCc---HHHHHHHHHh-h-hccc
Confidence            99999999999888999999999999985     33333 46788999999999988654   3555554332 2 2348


Q ss_pred             ccEEEeecccCCCCCCCccc----ccCCCccEEEecCCccCCcCc-ccccCC---CCCcEEecCCccccccCcccccccc
Q 047591          317 IEVIQLYGNHLSGNLPSSTG----INLPNLLRLYLWGNNLSGVIP-SSICNA---SKLTVLELSRNLFSGLVANTFGNCR  388 (1624)
Q Consensus       317 L~~L~Ls~N~l~g~ip~~~~----~~l~~L~~L~Ls~N~l~g~iP-~~~~~l---~~L~~L~Ls~N~l~g~~~~~f~~l~  388 (1624)
                      |++|++++|+++|.+|..++    .+++.|+.++++.|.+  .+| ..+..+   .+|+.|++++|.+....  .++.++
T Consensus       278 L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~  353 (562)
T 3a79_B          278 VEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPS  353 (562)
T ss_dssp             EEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCC
T ss_pred             ccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCC
Confidence            88888888888888887763    3566666666666666  344 222222   34666666666554221  012333


Q ss_pred             cccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCC
Q 047591          389 QLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLS  468 (1624)
Q Consensus       389 ~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~  468 (1624)
                      +|+                                                        +|++++|++++.+|.+|++++
T Consensus       354 ~L~--------------------------------------------------------~L~l~~n~l~~~~~~~~~~l~  377 (562)
T 3a79_B          354 SFT--------------------------------------------------------FLNFTQNVFTDSVFQGCSTLK  377 (562)
T ss_dssp             CCC--------------------------------------------------------EEECCSSCCCTTTTTTCCSCS
T ss_pred             Cce--------------------------------------------------------EEECCCCccccchhhhhcccC
Confidence            333                                                        333334444455677788889


Q ss_pred             cccEEeccCCccCC--CccchhccccccceecccccccccCCCcc-ccCCCCCceeecccccccCCCccccccccCCccc
Q 047591          469 NIIALSLYQNQLAS--TIPTTVGKLQNLQGLDLSYNNIQGSIPSE-LCQLESLNTLLLQGNALQNQIPTCLANLTSLRAL  545 (1624)
Q Consensus       469 ~L~~L~L~~N~l~g--~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~-l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L  545 (1624)
                      +|++|+|++|++++  .+|..++.+++|++|+|++|++++.+|.. +..+++|+.|+|++|++++.+|..+.  ++|+.|
T Consensus       378 ~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L  455 (562)
T 3a79_B          378 RLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVL  455 (562)
T ss_dssp             SCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEE
T ss_pred             CCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEE
Confidence            99999999999987  45677899999999999999999867764 77889999999999999988887765  789999


Q ss_pred             cccCccccccCchhhccccccceeecccccccCCCCcc-cccccccceeeccCCcCCCCcc
Q 047591          546 NLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQD-IGNLKVLTGLYLSGNQLSCSIP  605 (1624)
Q Consensus       546 ~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~-l~~l~~L~~L~Ls~N~l~g~iP  605 (1624)
                      +|++|+++ .+|..+..+++|+.|||++|+++ .+|.. ++.+++|+.|+|++|+++|..|
T Consensus       456 ~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~  514 (562)
T 3a79_B          456 DLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP  514 (562)
T ss_dssp             ECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred             ECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence            99999998 68888889999999999999999 57776 9999999999999999999776


No 42 
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00  E-value=5.6e-43  Score=459.09  Aligned_cols=488  Identities=19%  Similarity=0.151  Sum_probs=388.4

Q ss_pred             cCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCcccccccccccccccccCccc
Q 047591          128 TLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIG  207 (1624)
Q Consensus       128 ~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~  207 (1624)
                      .+|..+-  +++++|||++|+|+ .+|+..|.++++|++|||++|+|++..|.+|.+|++|++|+|++|+|++..|..|.
T Consensus        45 ~vP~~lp--~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~  121 (635)
T 4g8a_A           45 KIPDNLP--FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS  121 (635)
T ss_dssp             SCCSSSC--TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGT
T ss_pred             ccCCCCC--cCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhc
Confidence            4565442  57999999999998 47888889999999999999999987788999999999999999999977777899


Q ss_pred             ccccccceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEeecccccccCcCCccccccCcCC-
Q 047591          208 NLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLN-  286 (1624)
Q Consensus       208 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~-  286 (1624)
                      +|++|++|+|++|+|++..+..|+++++|++|+|++|.+++.-....+..+++|++|+|++|++++..|..+..+.+++ 
T Consensus       122 ~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~  201 (635)
T 4g8a_A          122 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL  201 (635)
T ss_dssp             TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTT
T ss_pred             CCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhh
Confidence            9999999999999999877778999999999999999998633334567899999999999999999999998887765 


Q ss_pred             ---eeeccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccC------------------------
Q 047591          287 ---YLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINL------------------------  339 (1624)
Q Consensus       287 ---~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l------------------------  339 (1624)
                         .++++.|++..+         +...+....++.+++++|..+..++......+                        
T Consensus       202 ~~~~~~ls~n~l~~i---------~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~  272 (635)
T 4g8a_A          202 LNLSLDLSLNPMNFI---------QPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDK  272 (635)
T ss_dssp             CCCEEECTTCCCCEE---------CTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCT
T ss_pred             hhhhhhcccCccccc---------CcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccc
Confidence               577787776543         22333334455555555544433222222223                        


Q ss_pred             ------CCccEEEecCCccCC---cCcccccCCCCCcEEecCCccccccCcccccccccccEEEccccccccCCCCCCcc
Q 047591          340 ------PNLLRLYLWGNNLSG---VIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQS  410 (1624)
Q Consensus       340 ------~~L~~L~Ls~N~l~g---~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~  410 (1624)
                            ..+..+++..+....   .++..+..+.+++.+++.+|.+....+  +....+|+.|++.+|++....      
T Consensus       273 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~~~~L~~L~l~~~~~~~~~------  344 (635)
T 4g8a_A          273 SALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQFP------  344 (635)
T ss_dssp             TTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGG--GGSCCCCSEEEEESCEESSCC------
T ss_pred             cccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccc--cccchhhhhhhcccccccCcC------
Confidence                  333444443333222   223445556678888888888876543  556678888888888875422      


Q ss_pred             cccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccC--CCCCCCcCCCCcccEEeccCCccCCCccchh
Q 047591          411 FFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELG--GGIPAEFGNLSNIIALSLYQNQLASTIPTTV  488 (1624)
Q Consensus       411 ~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~--g~ip~~~~~l~~L~~L~L~~N~l~g~iP~~~  488 (1624)
                          ...+..|+.+++..|......+  ...+. +++.++++.|.+.  +..|..+..+.+|++|++..|.+.+ ++..+
T Consensus       345 ----~~~l~~L~~l~l~~n~~~~~~~--~~~l~-~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~  416 (635)
T 4g8a_A          345 ----TLKLKSLKRLTFTSNKGGNAFS--EVDLP-SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNF  416 (635)
T ss_dssp             ----CCBCTTCCEEEEESCCSCCBCC--CCBCT-TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCC
T ss_pred             ----cccchhhhhcccccccCCCCcc--ccccc-ccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccc
Confidence                1245667888888887765433  23444 7889999999885  4456677788899999999998864 56678


Q ss_pred             ccccccceecccccccccCCC-ccccCCCCCceeecccccccCCCccccccccCCccccccCccc-cccCchhhcccccc
Q 047591          489 GKLQNLQGLDLSYNNIQGSIP-SELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRL-NSTIPSTFWSLEYI  566 (1624)
Q Consensus       489 ~~l~~L~~L~Ls~N~l~g~iP-~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l-~g~iP~~~~~l~~L  566 (1624)
                      ..+++|+.++++.|++.+..+ ..+.++.+++.++++.|++++..|..+..+++|+.|+|++|++ .+.+|..|..+.+|
T Consensus       417 ~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L  496 (635)
T 4g8a_A          417 LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL  496 (635)
T ss_dssp             TTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred             cccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhcccc
Confidence            889999999999999887665 4678899999999999999999999999999999999999985 45678899999999


Q ss_pred             ceeecccccccCCCCcccccccccceeeccCCcCCCCccccccCCccccccccccCCCCCCCchhhhcc-ccccCCCC
Q 047591          567 LVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAIGSL-ISLEKGEI  643 (1624)
Q Consensus       567 ~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~iP~~~~~l-~~L~~~~i  643 (1624)
                      +.|||++|+|++.+|..|+++++|+.|+|++|+|++..|..|+.+++|++|||++|++++.+|..+..+ ++|+...+
T Consensus       497 ~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L  574 (635)
T 4g8a_A          497 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNL  574 (635)
T ss_dssp             CEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEEC
T ss_pred             CEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEe
Confidence            999999999999999999999999999999999999888999999999999999999999999988776 46665433


No 43 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=4.4e-44  Score=422.14  Aligned_cols=200  Identities=26%  Similarity=0.390  Sum_probs=173.5

Q ss_pred             CCCcceeecCCccceEEEEec------CCCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          746 FSESNLIGAGSFGSVYKATLP------YGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       746 f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      ++..+.||+|+||+||+|++.      +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..++|
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  107 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI  107 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence            344578999999999999863      468899999975433 3457899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCce
Q 047591          819 LEYMPQGSLEKWLYSHK---------------YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA  883 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~  883 (1624)
                      ||||++|||.++|+.+.               ..++|.++++|+.|||+||+|||+.   +||||||||+|||+|+++++
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~  184 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNV  184 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCE
Confidence            99999999999997532               3589999999999999999999984   59999999999999999999


Q ss_pred             EEEeeeeeeccCCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          884 HLSDFGISKLLDGEDSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       884 kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ||+|||+|+.....+.. ..+...||++|||||++..+.++.++|||||||++|||+| |+.||...
T Consensus       185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~  251 (308)
T 4gt4_A          185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY  251 (308)
T ss_dssp             EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred             EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC
Confidence            99999999976543322 2334579999999999999999999999999999999999 89999754


No 44 
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=3.9e-43  Score=417.05  Aligned_cols=198  Identities=28%  Similarity=0.342  Sum_probs=179.0

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEec
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYM  822 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~  822 (1624)
                      +.|+..+.||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            45778889999999999999864 79999999998765555677899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCccc
Q 047591          823 PQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQ  902 (1624)
Q Consensus       823 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~  902 (1624)
                      ++|+|.+++...  .+++.++..|+.||+.||+|||+.   +||||||||+|||+++++.+||+|||+|+.+...... .
T Consensus       154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~  227 (346)
T 4fih_A          154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-R  227 (346)
T ss_dssp             TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-B
T ss_pred             CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc-c
Confidence            999999999753  589999999999999999999994   5999999999999999999999999999987654332 3


Q ss_pred             ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       903 ~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ...+||+.|||||++....|+.++||||+||++|||+||+.||..
T Consensus       228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~  272 (346)
T 4fih_A          228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN  272 (346)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            345799999999999999999999999999999999999999864


No 45 
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=3.3e-43  Score=418.24  Aligned_cols=200  Identities=25%  Similarity=0.401  Sum_probs=172.4

Q ss_pred             CCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      ++|...+.||+|+||+||+|+. .+|+.||||++....  ....+.|.+|+++|++++|||||++++++++++..|+|||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            6788999999999999999986 479999999997543  3345789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          821 YMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||++|+|.++|..++ ..+++.++..|+.||+.||+|||+.   +||||||||+|||+++++.+||+|||+|+...... 
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-  179 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-  179 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence            999999999997654 3578899999999999999999994   59999999999999999999999999999764321 


Q ss_pred             cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ...+..+||+.|||||++.+..|+.++||||+||++|||+||+.||..
T Consensus       180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~  227 (350)
T 4b9d_A          180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA  227 (350)
T ss_dssp             HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            122345799999999999999999999999999999999999999964


No 46 
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=4e-43  Score=410.82  Aligned_cols=200  Identities=26%  Similarity=0.413  Sum_probs=179.5

Q ss_pred             CCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ++|+..+.||+|+||+||+|+. .+|+.||||++....   ....+.+.+|+++|++++|||||++++++++++..|+||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4688899999999999999986 579999999997532   334578999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      |||++|+|.+++...+ .+++.++..|+.||+.||+|||+.   +||||||||+|||+++++.+||+|||+|+.+..+..
T Consensus       112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~  187 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK  187 (311)
T ss_dssp             CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred             ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence            9999999999998654 689999999999999999999994   599999999999999999999999999998764432


Q ss_pred             -cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 -VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 -~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                       ......+||+.|||||++.+..|+.++||||+||++|||+||+.||..
T Consensus       188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~  236 (311)
T 4aw0_A          188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA  236 (311)
T ss_dssp             CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence             223456899999999999988999999999999999999999999964


No 47 
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=8.1e-43  Score=406.53  Aligned_cols=195  Identities=28%  Similarity=0.433  Sum_probs=168.4

Q ss_pred             CCcceeecCCccceEEEEec-CCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeecc----CCeEEEEE
Q 047591          747 SESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSN----HGFKALIL  819 (1624)
Q Consensus       747 ~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV~  819 (1624)
                      ...+.||+|+||+||+|... +++.||||++....  ....+.|.+|+++|++++|||||+++++|.+    ++..|+||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            34567999999999999864 68999999997543  2345679999999999999999999999864    35689999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCC-CCceEEEeeeeeeccCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD-DTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~-~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||++|+|.++++... .+++..+..|+.||+.||+|||+.+ ++||||||||+|||++. ++.+||+|||+|+..... 
T Consensus       109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-  185 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-  185 (290)
T ss_dssp             ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-
T ss_pred             eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC-
Confidence            9999999999998654 7899999999999999999999864 46999999999999984 789999999999865432 


Q ss_pred             CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                        .....+||+.|||||++.+ .++.++|||||||++|||+||+.||.+
T Consensus       186 --~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~  231 (290)
T 3fpq_A          186 --FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             --SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             --ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence              2334579999999998864 699999999999999999999999965


No 48 
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00  E-value=1.7e-41  Score=426.79  Aligned_cols=372  Identities=19%  Similarity=0.217  Sum_probs=227.7

Q ss_pred             CcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCcccccc
Q 047591          113 SFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLS  192 (1624)
Q Consensus       113 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~  192 (1624)
                      ++|++|+|++|++++..|..|+.+++|++|+|++|.+.+.+++..+.++++|++|+|++|++++..|..|+++++|++|+
T Consensus        30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~  109 (455)
T 3v47_A           30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT  109 (455)
T ss_dssp             TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred             CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence            67999999999999888999999999999999999998888888888889999999999998888888888888888888


Q ss_pred             cccccccccccCc--ccccccccceeccCCcCCCCCCCc-ccccCccchheeccccccCCCCccccccCCCCcEeecccc
Q 047591          193 VSFNELTGRIPQN--IGNLTELMELYLNGNNLQGEFPPT-IFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDC  269 (1624)
Q Consensus       193 Ls~N~l~g~ip~~--~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N  269 (1624)
                      |++|++++.+|..  |+++++|++|+|++|++++..|.. +.++++|++|+|++|++                       
T Consensus       110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l-----------------------  166 (455)
T 3v47_A          110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV-----------------------  166 (455)
T ss_dssp             CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCB-----------------------
T ss_pred             CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcc-----------------------
Confidence            8888888766655  777888888888888777665654 44555555555555554                       


Q ss_pred             cccCcCCcccccc--CcCCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEEe
Q 047591          270 MTTGRIPKDIGNC--TLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYL  347 (1624)
Q Consensus       270 ~l~g~ip~~~~~l--~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~L  347 (1624)
                        ++..|..+..+  .+|+.|++++|++.+++...+.......++                         .+++|++|+|
T Consensus       167 --~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~-------------------------~~~~L~~L~L  219 (455)
T 3v47_A          167 --KSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPF-------------------------KNTSITTLDL  219 (455)
T ss_dssp             --SCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTT-------------------------TTCEEEEEEC
T ss_pred             --cccChhhhhccccccccccccccCcccccchhhcccccccccc-------------------------ccceeeeEec
Confidence              44444444444  456666666665554332222211111111                         3455666666


Q ss_pred             cCCccCCcCcccccCC---CCCcEEecCCccccccCcccccccccccEEEccccccccCCCCCCccccccccccccccee
Q 047591          348 WGNNLSGVIPSSICNA---SKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYL  424 (1624)
Q Consensus       348 s~N~l~g~iP~~~~~l---~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L  424 (1624)
                      ++|++++.+|..+..+   .+|+.|++++|.+.+...                                           
T Consensus       220 s~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~-------------------------------------------  256 (455)
T 3v47_A          220 SGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF-------------------------------------------  256 (455)
T ss_dssp             TTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT-------------------------------------------
T ss_pred             CCCcccccchhhhhccccccceeeEeecccccccccc-------------------------------------------
Confidence            6666666666555443   455555555554432210                                           


Q ss_pred             eeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCC--CCcccEEeccCCccCCCccchhccccccceeccccc
Q 047591          425 AIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGN--LSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYN  502 (1624)
Q Consensus       425 ~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~--l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N  502 (1624)
                        ..+.+                         .+..+..+..  .++|++|+|++|++++.+|..++.+++|++|+|++|
T Consensus       257 --~~~~~-------------------------~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n  309 (455)
T 3v47_A          257 --GHTNF-------------------------KDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQN  309 (455)
T ss_dssp             --TCCSS-------------------------CCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred             --chhhh-------------------------ccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCC
Confidence              00001                         1111111211  245666666666666666666666666666666666


Q ss_pred             ccccCCCccccCCCCCceeecccccccCCCccccccccCCccccccCccccccCchhhccccccceeecccccccCCCCc
Q 047591          503 NIQGSIPSELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQ  582 (1624)
Q Consensus       503 ~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~  582 (1624)
                      ++++..|..|.++++|+.|+|++|++++..|..|+++++|+.|+|++|++++..|..|..+++|+.|||++|++++..+.
T Consensus       310 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~  389 (455)
T 3v47_A          310 EINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDG  389 (455)
T ss_dssp             CCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred             cccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHh
Confidence            66665566666666666666666666655555666666666666666666554444444444444444444444433333


Q ss_pred             ccccccccceeeccCCcCCCCc
Q 047591          583 DIGNLKVLTGLYLSGNQLSCSI  604 (1624)
Q Consensus       583 ~l~~l~~L~~L~Ls~N~l~g~i  604 (1624)
                      .++.+++|+.|+|++|+++|.+
T Consensus       390 ~~~~l~~L~~L~l~~N~l~~~~  411 (455)
T 3v47_A          390 IFDRLTSLQKIWLHTNPWDCSC  411 (455)
T ss_dssp             TTTTCTTCCEEECCSSCBCCCT
T ss_pred             HhccCCcccEEEccCCCcccCC
Confidence            3344444444444444444433


No 49 
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=3.3e-42  Score=418.81  Aligned_cols=198  Identities=28%  Similarity=0.344  Sum_probs=179.5

Q ss_pred             CCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEec
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYM  822 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~  822 (1624)
                      +.|+..+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+++..|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            5688889999999999999986 469999999998766556677999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCccc
Q 047591          823 PQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQ  902 (1624)
Q Consensus       823 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~  902 (1624)
                      ++|+|.++++..  .+++.++..|+.||+.||+|||+.   +||||||||+|||++.++.+||+|||+|+.+...... .
T Consensus       231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~  304 (423)
T 4fie_A          231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-R  304 (423)
T ss_dssp             TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC-B
T ss_pred             CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc-c
Confidence            999999999754  589999999999999999999994   5999999999999999999999999999987654332 3


Q ss_pred             ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       903 ~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ...+||+.|||||++....|+.++|||||||++|||+||+.||..
T Consensus       305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~  349 (423)
T 4fie_A          305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN  349 (423)
T ss_dssp             CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            345799999999999999999999999999999999999999864


No 50 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=4.1e-43  Score=414.93  Aligned_cols=198  Identities=25%  Similarity=0.368  Sum_probs=162.9

Q ss_pred             CCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCC----eEEEEEE
Q 047591          745 GFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHG----FKALILE  820 (1624)
Q Consensus       745 ~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lV~E  820 (1624)
                      ++...+.||+|+||+||+|++ +|+.||||+++..... ...+.+|+..+.+++|||||+++|+|.+++    ..|||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            345568899999999999988 5899999999754321 223345666667899999999999997653    5799999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccC
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG-----HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD  895 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~  895 (1624)
                      ||++|+|.++|+..  .++|+++.+|+.|+|+||+|||+.     +.++||||||||+|||+|+++++||+|||+|+...
T Consensus        82 y~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  159 (303)
T 3hmm_A           82 YHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             CCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             CCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence            99999999999764  589999999999999999999975     24589999999999999999999999999999875


Q ss_pred             CCCCcc---cccccccccccCccccCCC------CCCcchhHHHHHHHHHHHHcCCCCCC
Q 047591          896 GEDSVT---QTMTLATFGYMAPEYGSEG------IVSTCGDVYSFGILMIETFTRKMPTD  946 (1624)
Q Consensus       896 ~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~~~k~DvwS~Gvil~elltg~~P~~  946 (1624)
                      ......   ....+||+.|||||++.+.      .++.|+|||||||++|||+||+.|+.
T Consensus       160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~  219 (303)
T 3hmm_A          160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG  219 (303)
T ss_dssp             TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred             CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCC
Confidence            543322   2235799999999988653      46889999999999999999987764


No 51 
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00  E-value=1.9e-41  Score=424.31  Aligned_cols=405  Identities=23%  Similarity=0.261  Sum_probs=164.5

Q ss_pred             CCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCcccccccccccccccccCcccccccccce
Q 047591          136 MPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMEL  215 (1624)
Q Consensus       136 l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L  215 (1624)
                      .++|++|++++|.+ |.+|+++ +++++|++|++++|+++|.+|.+++++++|+.++++.+..           .+|++|
T Consensus        10 ~~~L~~L~l~~n~l-~~iP~~i-~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L   76 (454)
T 1jl5_A           10 NTFLQEPLRHSSNL-TEMPVEA-ENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL   76 (454)
T ss_dssp             --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred             cccchhhhcccCch-hhCChhH-hcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence            35555555555555 4454443 4455555555555555555555555555441111111100           112455


Q ss_pred             eccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEeecccccccCcCCccccccCcCCeeeccCCcc
Q 047591          216 YLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQL  295 (1624)
Q Consensus       216 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l  295 (1624)
                      ++++|++++ +|..   .++|++|++++|++++ +|..    +++|++|++++|++++ +|..   .++|++|+|++|++
T Consensus        77 ~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l  143 (454)
T 1jl5_A           77 ELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQL  143 (454)
T ss_dssp             ECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCC
T ss_pred             EecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCC
Confidence            555555543 2321   1345555555555543 4421    2445555555555543 1211   13455555544433


Q ss_pred             cccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCcc
Q 047591          296 TDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNL  375 (1624)
Q Consensus       296 ~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~  375 (1624)
                      +.         +| .+.++++|++|++++|++++ +|...    ++|++|++++|++++ +| .++++++|++|++++|+
T Consensus       144 ~~---------lp-~~~~l~~L~~L~l~~N~l~~-lp~~~----~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~  206 (454)
T 1jl5_A          144 EK---------LP-ELQNSSFLKIIDVDNNSLKK-LPDLP----PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNS  206 (454)
T ss_dssp             SS---------CC-CCTTCTTCCEEECCSSCCSC-CCCCC----TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSC
T ss_pred             CC---------Cc-ccCCCCCCCEEECCCCcCcc-cCCCc----ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCc
Confidence            21         33 24445555555555555543 44321    245555555555554 33 34555555555555555


Q ss_pred             ccccCcccccccccccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcc
Q 047591          376 FSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCE  455 (1624)
Q Consensus       376 l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~  455 (1624)
                      +++.+. .   .++|++|++++|+++..        + .+..+++|++|++++|++++ +|...    .+|+.|++++|+
T Consensus       207 l~~l~~-~---~~~L~~L~l~~n~l~~l--------p-~~~~l~~L~~L~l~~N~l~~-l~~~~----~~L~~L~l~~N~  268 (454)
T 1jl5_A          207 LKKLPD-L---PLSLESIVAGNNILEEL--------P-ELQNLPFLTTIYADNNLLKT-LPDLP----PSLEALNVRDNY  268 (454)
T ss_dssp             CSSCCC-C---CTTCCEEECCSSCCSSC--------C-CCTTCTTCCEEECCSSCCSS-CCSCC----TTCCEEECCSSC
T ss_pred             CCcCCC-C---cCcccEEECcCCcCCcc--------c-ccCCCCCCCEEECCCCcCCc-ccccc----cccCEEECCCCc
Confidence            554221 1   13455555555554321        1 13344455555555555543 22211    245555555555


Q ss_pred             cCCCCCCCcCCCCcccEEeccCCccCCCccchhccccccceecccccccccCCCccccCC-CCCceeecccccccCCCcc
Q 047591          456 LGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQL-ESLNTLLLQGNALQNQIPT  534 (1624)
Q Consensus       456 l~g~ip~~~~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l-~~L~~L~L~~N~l~g~iP~  534 (1624)
                      +.+ +|..   +++|++|++++|++++ +|..   .++|++|++++|++++ +|    .+ ++|+.|+|++|++++ +|.
T Consensus       269 l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~  334 (454)
T 1jl5_A          269 LTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPA  334 (454)
T ss_dssp             CSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCC
T ss_pred             ccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-ccc
Confidence            554 3432   2456666666666654 2211   1456666666666653 22    12 356666666666664 444


Q ss_pred             ccccccCCccccccCccccccCchhhccccccceeecccccccC--CCCcccccccccceeeccCCcCCCCccccccCCc
Q 047591          535 CLANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSG--CLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLK  612 (1624)
Q Consensus       535 ~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g--~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~  612 (1624)
                      .   +++|+.|+|++|++++ +|.   .+.+|+.||+++|++++  .+|.+++.+        +.|++.|.+|..   ++
T Consensus       335 ~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~---~~  396 (454)
T 1jl5_A          335 L---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPEL---PQ  396 (454)
T ss_dssp             C---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC-------------
T ss_pred             c---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccccc---cC
Confidence            3   3556666666666653 444   34556666666666666  555554432        234555555542   35


Q ss_pred             cccccccccCCCCC--CCchhhh
Q 047591          613 DLTYLALARNGFQG--SIPEAIG  633 (1624)
Q Consensus       613 ~L~~L~ls~N~l~g--~iP~~~~  633 (1624)
                      +|++|++++|+++|  .||.++.
T Consensus       397 ~L~~L~ls~N~l~~~~~iP~sl~  419 (454)
T 1jl5_A          397 NLKQLHVETNPLREFPDIPESVE  419 (454)
T ss_dssp             -----------------------
T ss_pred             cCCEEECCCCcCCccccchhhHh
Confidence            56666666666665  5665443


No 52 
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00  E-value=8.5e-42  Score=427.43  Aligned_cols=412  Identities=24%  Similarity=0.296  Sum_probs=200.5

Q ss_pred             CcEEEEecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCC-------------cEEEccCCCCCCccch
Q 047591           89 GRVTDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRL-------------RIIDLSSNRISGNLFD  155 (1624)
Q Consensus        89 ~~v~~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L-------------~~L~Ls~N~l~g~~~~  155 (1624)
                      .++..|+++++++ |++|++|++|++|++|++++|+++|.+|.+++.+++|             ++|++++|.+++ +|.
T Consensus        11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~   88 (454)
T 1jl5_A           11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE   88 (454)
T ss_dssp             ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred             ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence            4577788888888 8999999999999999999999999999999988875             777777777765 333


Q ss_pred             hhhccCCCcCEEEccCCcccccCCccccCCCcccccccccccccccccCcccccccccceeccCCcCCCCCCCcccccCc
Q 047591          156 DMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSS  235 (1624)
Q Consensus       156 ~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~  235 (1624)
                          -.++|++|++++|++++ +|..   +++|++|++++|++++ +|...   ++|++|+|++|++++ +| .++++++
T Consensus        89 ----~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~~---~~L~~L~L~~n~l~~-lp-~~~~l~~  154 (454)
T 1jl5_A           89 ----LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDLP---PLLEYLGVSNNQLEK-LP-ELQNSSF  154 (454)
T ss_dssp             ----CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSCC---TTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred             ----CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCCC---CCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence                13567777777777775 6653   2567777777777763 33321   567777777777775 66 4677777


Q ss_pred             cchheeccccccCCCCccccccCCCCcEeecccccccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCC
Q 047591          236 LRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNS  315 (1624)
Q Consensus       236 L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~  315 (1624)
                      |++|++++|++++ +|..    .++|++|++++|++++ +| .++++++|+.|++++|++..+         |...   .
T Consensus       155 L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l---------~~~~---~  215 (454)
T 1jl5_A          155 LKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL---------PDLP---L  215 (454)
T ss_dssp             CCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC---------CCCC---T
T ss_pred             CCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC---------CCCc---C
Confidence            7777777777764 5532    2466666666666665 44 466666666666666654432         2111   2


Q ss_pred             CccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEc
Q 047591          316 NIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNL  395 (1624)
Q Consensus       316 ~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L  395 (1624)
                      +|++|++++|+++ .+|. + ..+++|++|++++|++++ +|..   +++|++|++++|++++.+ ..   +++|++|++
T Consensus       216 ~L~~L~l~~n~l~-~lp~-~-~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l~-~~---~~~L~~L~l  284 (454)
T 1jl5_A          216 SLESIVAGNNILE-ELPE-L-QNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDLP-EL---PQSLTFLDV  284 (454)
T ss_dssp             TCCEEECCSSCCS-SCCC-C-TTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCCC-CC---CTTCCEEEC
T ss_pred             cccEEECcCCcCC-cccc-c-CCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccccC-cc---cCcCCEEEC
Confidence            4555555555555 4443 2 245555555555555553 3322   244455555555554422 11   133334443


Q ss_pred             cccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEec
Q 047591          396 AYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSL  475 (1624)
Q Consensus       396 ~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L  475 (1624)
                      +                               +|.+++. |                      .+|      ++|++|++
T Consensus       285 s-------------------------------~N~l~~l-~----------------------~~~------~~L~~L~l  304 (454)
T 1jl5_A          285 S-------------------------------ENIFSGL-S----------------------ELP------PNLYYLNA  304 (454)
T ss_dssp             C-------------------------------SSCCSEE-S----------------------CCC------TTCCEEEC
T ss_pred             c-------------------------------CCccCcc-c----------------------CcC------CcCCEEEC
Confidence            3                               3333321 0                      111      35566666


Q ss_pred             cCCccCCCccchhccccccceecccccccccCCCccccCCCCCceeecccccccCCCccccccccCCccccccCccccc-
Q 047591          476 YQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLNS-  554 (1624)
Q Consensus       476 ~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g-  554 (1624)
                      ++|++++ +|..   .++|++|++++|++++ +|..   +++|+.|+|++|+++ .+|.   .+++|++|+|++|++++ 
T Consensus       305 ~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l  372 (454)
T 1jl5_A          305 SSNEIRS-LCDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREF  372 (454)
T ss_dssp             CSSCCSE-ECCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSC
T ss_pred             cCCcCCc-ccCC---cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcC
Confidence            6666654 2211   1467777777777775 5654   467777777777777 4665   36777777777777777 


Q ss_pred             -cCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCCC--CccccccCCccccccccccCCCCCCCchh
Q 047591          555 -TIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSC--SIPSSIGGLKDLTYLALARNGFQGSIPEA  631 (1624)
Q Consensus       555 -~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g--~iP~~~~~l~~L~~L~ls~N~l~g~iP~~  631 (1624)
                       .+|..++.        |+.|.+.|.+|..   +++|+.|+|++|+++|  .||.+      |+.|.+.+|.+.+.+|..
T Consensus       373 ~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~~  435 (454)
T 1jl5_A          373 PDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPYEFA  435 (454)
T ss_dssp             CCCCTTCCE--------EECCC----------------------------------------------------------
T ss_pred             CCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchhh------HhheeCcCcccCCccccC
Confidence             66666543        3457777778874   4788889999999987  77765      455678888888888866


Q ss_pred             hhcc
Q 047591          632 IGSL  635 (1624)
Q Consensus       632 ~~~l  635 (1624)
                      ....
T Consensus       436 ~~~~  439 (454)
T 1jl5_A          436 HETT  439 (454)
T ss_dssp             ----
T ss_pred             HHHh
Confidence            5443


No 53 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=7.4e-42  Score=417.33  Aligned_cols=267  Identities=23%  Similarity=0.252  Sum_probs=200.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeecc------CCe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSN------PGF 1405 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~------~~~ 1405 (1624)
                      +.|...+.||+|+||+||+|+.. +|+.||||+++..  .....+.+.+|+++|++++|||||++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            56888899999999999999875 6899999999643  23456789999999999999999999998753      367


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeec
Q 047591         1406 KALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL 1485 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~ 1485 (1624)
                      .|+|||||+ |+|.+++.+. ..+++.+...|+.||+.||+|||+   .+||||||||+|||++.++.+||+|||+|+.+
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~  208 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL  208 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred             EEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence            899999996 7899999764 468999999999999999999996   89999999999999999999999999999876


Q ss_pred             CCCC---CccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhh--cCChh--
Q 047591         1486 DGVD---SMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE--SLPDA-- 1557 (1624)
Q Consensus      1486 ~~~~---~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~--~~~~~-- 1557 (1624)
                      ....   .......+||+.|||||++.+ ..++.++||||+||++|||+||+.||.+....+. +......  ..+..  
T Consensus       209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~-l~~I~~~~g~p~~~~~  287 (398)
T 4b99_A          209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ-LQLIMMVLGTPSPAVI  287 (398)
T ss_dssp             -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH-HHHHHHHHCCCCGGGT
T ss_pred             ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH-HHHHHHhcCCCChHHh
Confidence            4321   223345689999999998766 4579999999999999999999999975422111 1111110  00000  


Q ss_pred             -------HHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1558 -------VTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1558 -------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                             ....+. .+..................+.+|+.+|++.||++|||++|+++
T Consensus       288 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          288 QAVGAERVRAYIQ-SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             C-----CHHHHHH-SSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hhhhhhhhhhhhh-cCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                   000000 00000000000011123466789999999999999999999986


No 54 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=3.3e-42  Score=407.95  Aligned_cols=198  Identities=24%  Similarity=0.297  Sum_probs=171.7

Q ss_pred             CCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEec
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYM  822 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~  822 (1624)
                      +.|...+.||+|+||+||+|+. .+|+.||||+++.+..     +.+|+.+|++++|||||++++++.+++..|||||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  132 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL  132 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            4577778899999999999986 4699999999975422     247999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCC-ceEEEeeeeeeccCCCCCc-
Q 047591          823 PQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISKLLDGEDSV-  900 (1624)
Q Consensus       823 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~-~~kl~DFGla~~~~~~~~~-  900 (1624)
                      ++|+|.++|+..+ .+++.++..|+.||+.||+|||+.   +||||||||+|||++.++ .+||+|||+|+.+...... 
T Consensus       133 ~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~  208 (336)
T 4g3f_A          133 EGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK  208 (336)
T ss_dssp             TTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred             CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence            9999999998654 699999999999999999999984   599999999999999987 6999999999987543221 


Q ss_pred             ---ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCccCc
Q 047591          901 ---TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFT  950 (1624)
Q Consensus       901 ---~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~~~  950 (1624)
                         .....+||+.|||||++.+..++.++|||||||++|||+||+.||.....
T Consensus       209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~  261 (336)
T 4g3f_A          209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR  261 (336)
T ss_dssp             -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC
T ss_pred             ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH
Confidence               12235799999999999999999999999999999999999999976443


No 55 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=7.2e-42  Score=413.14  Aligned_cols=198  Identities=25%  Similarity=0.325  Sum_probs=168.9

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEc----CCceEEEEEeccchhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeE
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFA----DGTNAAIKIFSLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~----~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      ..+.|...+.||+|+||+||+|+.+    .++.||||++....  ...++.+|+++|+++ +|||||++++++.+.+..+
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            4577999999999999999999753    36789999885432  345688999999998 6999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCC-CcEEEeeecceeecC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDD-MVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~-~~~kl~DFGla~~~~ 1486 (1624)
                      +|||||++|+|.+++.    .+++.+...|+.|++.||+|||+   .+||||||||+|||++.+ +.+||+|||+|+...
T Consensus        97 lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~  169 (361)
T 4f9c_A           97 IAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH  169 (361)
T ss_dssp             EEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred             EEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence            9999999999999984    37888999999999999999996   899999999999999977 799999999998764


Q ss_pred             CCCC---------------------------ccccccccccccccccccCCC-CcCcccchHHHHHHHHHHHcCCCCCCC
Q 047591         1487 GVDS---------------------------MKQTMTLATIGYMAPEYGSEG-IVSTSGDVYSFGILMMETLTRRKPTDD 1538 (1624)
Q Consensus      1487 ~~~~---------------------------~~~~~~~gt~~y~APE~~~~~-~~~~k~DV~SfGvil~Elltg~~P~~~ 1538 (1624)
                      ....                           ...+..+||+.|||||++.+. .|+.++||||+||++|||+||+.||..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~  249 (361)
T 4f9c_A          170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK  249 (361)
T ss_dssp             TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence            3211                           112235799999999988664 589999999999999999999999964


Q ss_pred             C
Q 047591         1539 M 1539 (1624)
Q Consensus      1539 ~ 1539 (1624)
                      .
T Consensus       250 ~  250 (361)
T 4f9c_A          250 A  250 (361)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 56 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.8e-42  Score=405.43  Aligned_cols=199  Identities=29%  Similarity=0.375  Sum_probs=168.6

Q ss_pred             CCCCCcceeecCCccceEEEEe----cCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~----~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      ++|+..+.||+|+||+||+|+.    .+++.||||+++...  ......+.+|+++|++++|||||++++++.+++..|+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            4688899999999999999975    247899999986542  2233568899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      |||||++|+|.+++...+ .+++.++..|+.|++.||+|||+.   +||||||||+|||+++++.+||+|||+|+.....
T Consensus       104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  179 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH  179 (304)
T ss_dssp             EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred             EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence            999999999999998654 689999999999999999999994   5999999999999999999999999999976443


Q ss_pred             CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       898 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ... ....+||+.|||||++....++.++||||+||++|||+||+.||..
T Consensus       180 ~~~-~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~  228 (304)
T 3ubd_A          180 EKK-AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG  228 (304)
T ss_dssp             -CC-CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             Ccc-ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC
Confidence            322 2345799999999999989999999999999999999999999964


No 57 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=8.3e-42  Score=409.74  Aligned_cols=210  Identities=25%  Similarity=0.417  Sum_probs=179.1

Q ss_pred             HHHHhhcCCCCCcceeecCCccceEEEEec------CCCEEEEEEeecccc-hhHHHHHHHHHHHHhcCC-Cceeeeeee
Q 047591          737 QELQRLTDGFSESNLIGAGSFGSVYKATLP------YGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRH-RNLVKIISS  808 (1624)
Q Consensus       737 ~el~~~t~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H-~niv~l~~~  808 (1624)
                      ++.+...++|...+.||+|+||+||+|++.      .++.||||++..... ...+.|.+|+++|++++| ||||+++|+
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~  136 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA  136 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence            344445678888999999999999999864      236899999975443 345679999999999965 899999999


Q ss_pred             eccC-CeEEEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCC
Q 047591          809 CSNH-GFKALILEYMPQGSLEKWLYSHK---------------YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKP  872 (1624)
Q Consensus       809 ~~~~-~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp  872 (1624)
                      |.+. +..|+|||||++|+|.++|+...               ..++|.++..|+.|||+||+|||+.   +||||||||
T Consensus       137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~  213 (353)
T 4ase_A          137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA  213 (353)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred             EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCc
Confidence            9764 56899999999999999997642               2489999999999999999999994   599999999


Q ss_pred             CCeeeCCCCceEEEeeeeeeccCCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCccC
Q 047591          873 SNVLLDDDTVAHLSDFGISKLLDGEDSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEMF  949 (1624)
Q Consensus       873 ~NILld~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~~  949 (1624)
                      +|||+++++++||+|||+|+....+... .....+||+.|||||++..+.++.++|||||||++|||+| |+.||....
T Consensus       214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~  292 (353)
T 4ase_A          214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  292 (353)
T ss_dssp             GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999999977554332 3344579999999999999999999999999999999998 899997643


No 58 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.6e-41  Score=407.59  Aligned_cols=286  Identities=34%  Similarity=0.555  Sum_probs=232.4

Q ss_pred             hhccccCHHHHHHHhCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchh-hHHHHHHHHHHHHHhcCCCceeEEEe
Q 047591         1320 AALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQED-RALKSFDAECEVMRRIRHRNLAKIVS 1398 (1624)
Q Consensus      1320 ~~~~~~~~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~-~~~~~f~~E~~~l~~l~HpNIv~l~g 1398 (1624)
                      .....++++++..++++|...+.||+|+||+||+|+..+++.||||++..... .....|.+|++++++++||||+++++
T Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   94 (326)
T 3uim_A           15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG   94 (326)
T ss_dssp             CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred             CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence            34678899999999999999999999999999999988899999999865432 23347899999999999999999999


Q ss_pred             eeccCCeeEEEEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEE
Q 047591         1399 SCSNPGFKALILQYMPQGSLEKWLYSHN---YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAH 1475 (1624)
Q Consensus      1399 ~~~~~~~~~lV~ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~k 1475 (1624)
                      +|.+++..++||||+++|+|.++++...   ..+++..+..|+.|++.||+|||+.+..+|+||||||+|||+++++.+|
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k  174 (326)
T 3uim_A           95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV  174 (326)
T ss_dssp             EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred             EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence            9999999999999999999999998643   3489999999999999999999985445999999999999999999999


Q ss_pred             EeeecceeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCC---Cccchhhhhhhhh
Q 047591         1476 LGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDM---FTGEVCLKHWVEE 1552 (1624)
Q Consensus      1476 l~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~---~~~~~~l~~~~~~ 1552 (1624)
                      |+|||+|+..............||+.|+|||++.+..++.++|||||||++|||+||+.||+..   .........|+..
T Consensus       175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (326)
T 3uim_A          175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG  254 (326)
T ss_dssp             ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred             eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence            9999999987654444444556999999999998888999999999999999999999999631   1122233444433


Q ss_pred             cCChh-HHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 047591         1553 SLPDA-VTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKK 1612 (1624)
Q Consensus      1553 ~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~ 1612 (1624)
                      ..... ....++..+....       ...++..+.+++.+||+.+|++|||++||+++|+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          255 LLKEKKLEALVDVDLQGNY-------KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             TTSSCCSTTSSCTTCTTSC-------CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             HhhchhhhhhcChhhcccc-------CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            32221 1222222221111       13456778999999999999999999999999975


No 59 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.2e-41  Score=390.96  Aligned_cols=197  Identities=26%  Similarity=0.466  Sum_probs=161.9

Q ss_pred             CCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ++|+..+.||+|+||+||+|+. .+|+.||||+++...   ....+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6899999999999999999986 479999999997542   234567999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||| +|+|.+++..++ .+++.++..|+.||+.||+|||+.   +||||||||+|||+++++.+||+|||+|+...... 
T Consensus        93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-  166 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-  166 (275)
T ss_dssp             ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred             eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence            999 689999998654 699999999999999999999994   59999999999999999999999999998765432 


Q ss_pred             cccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                       .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||..
T Consensus       167 -~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~  214 (275)
T 3hyh_A          167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD  214 (275)
T ss_dssp             ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence             2234579999999999887765 6899999999999999999999964


No 60 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=3.8e-41  Score=431.13  Aligned_cols=251  Identities=23%  Similarity=0.300  Sum_probs=208.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..++|||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            56888899999999999999875 68999999987666666778999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCC--CcEEEeeecceeecCCCCCc
Q 047591         1414 PQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDD--MVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~--~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      ++|+|.+++.+....+++.+...|+.||+.||+|||+   .+|+||||||+|||++.+  +.+||+|||+|+.+....  
T Consensus       237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~--  311 (573)
T 3uto_A          237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ--  311 (573)
T ss_dssp             CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS--
T ss_pred             CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC--
Confidence            9999999997666678999999999999999999996   799999999999999854  899999999999886433  


Q ss_pred             cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCch
Q 047591         1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEE 1571 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 1571 (1624)
                      .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+. +........            .... 
T Consensus       312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-~~~i~~~~~------------~~~~-  377 (573)
T 3uto_A          312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDW------------NMDD-  377 (573)
T ss_dssp             EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTTCC------------CCCS-
T ss_pred             ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHhCCC------------CCCc-
Confidence            23345799999999999999999999999999999999999999975432111 111111000            0000 


Q ss_pred             HHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1572 EADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1572 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                          .....++..+.+|+.+|++.||++|||++|+++
T Consensus       378 ----~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          378 ----SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             ----GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ----ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                001223456788999999999999999999987


No 61 
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00  E-value=3.4e-41  Score=401.97  Aligned_cols=298  Identities=29%  Similarity=0.469  Sum_probs=225.3

Q ss_pred             cCChhhHHHHHHHHHHhccCCccccccCCCCCCCCCCCCCCCCcc--ceeeEecCCC--CcEEEEecCCCCCCc--cCCc
Q 047591           34 ANITTDEAALLQVKAHIALDPQNFFERNWNLSATTNTSSSNSVCN--WVGVTCGSRH--GRVTDLSIPNLGLGG--TIPP  107 (1624)
Q Consensus        34 ~~~~~d~~aLl~~k~~~~~~p~~~~~~~W~~~~~~~~~~~~~~C~--W~Gv~C~~~~--~~v~~l~l~~~~l~g--~ip~  107 (1624)
                      .|.++|++||++||++++ ||. . .++|+.        +.+||.  |.||+|+..+  ++|+.|+|+++++.|  .+|+
T Consensus         2 ~c~~~~~~aL~~~k~~~~-~~~-~-l~~W~~--------~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~   70 (313)
T 1ogq_A            2 LCNPQDKQALLQIKKDLG-NPT-T-LSSWLP--------TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS   70 (313)
T ss_dssp             CSCHHHHHHHHHHHHHTT-CCG-G-GTTCCT--------TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG
T ss_pred             CCCHHHHHHHHHHHHhcC-Ccc-c-ccCCCC--------CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh
Confidence            478999999999999995 775 3 358863        357888  9999998765  899999999999999  9999


Q ss_pred             cccCCCcccEEEecC-CCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCC
Q 047591          108 HVANLSFLVSLNISG-NRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCS  186 (1624)
Q Consensus       108 ~i~~L~~L~~L~Ls~-N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~  186 (1624)
                      .++++++|++|+|++ |++.+.+|..|+.+++|++|+|++|++++.+|.. +..+++|++|+|++|++++.+|..|+.++
T Consensus        71 ~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~  149 (313)
T 1ogq_A           71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF-LSQIKTLVTLDFSYNALSGTLPPSISSLP  149 (313)
T ss_dssp             GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGG-GGGCTTCCEEECCSSEEESCCCGGGGGCT
T ss_pred             hHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHH-HhCCCCCCEEeCCCCccCCcCChHHhcCC
Confidence            999999999999995 9999999999999999999999999998766654 46788888888888888888888888888


Q ss_pred             cccccccccccccccccCcccccc-cccceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEee
Q 047591          187 KLKRLSVSFNELTGRIPQNIGNLT-ELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELN  265 (1624)
Q Consensus       187 ~L~~L~Ls~N~l~g~ip~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~  265 (1624)
                      +|++|+|++|+++|.+|..+++++ +|++|+|++|+++|.+|..+..++ |++|+|++|++++.+|. .+..+++|++|+
T Consensus       150 ~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~  227 (313)
T 1ogq_A          150 NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASV-LFGSDKNTQKIH  227 (313)
T ss_dssp             TCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGG-GCCTTSCCSEEE
T ss_pred             CCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCH-HHhcCCCCCEEE
Confidence            888888888888888888888887 788888888888777777776665 66666666665543332 223444444444


Q ss_pred             cccccccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEE
Q 047591          266 LRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRL  345 (1624)
Q Consensus       266 Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L  345 (1624)
                      |++|++++.+|.                                 +..+++|++|+|++|+++|.+|..+. .+++|++|
T Consensus       228 L~~N~l~~~~~~---------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L  273 (313)
T 1ogq_A          228 LAKNSLAFDLGK---------------------------------VGLSKNLNGLDLRNNRIYGTLPQGLT-QLKFLHSL  273 (313)
T ss_dssp             CCSSEECCBGGG---------------------------------CCCCTTCCEEECCSSCCEECCCGGGG-GCTTCCEE
T ss_pred             CCCCceeeecCc---------------------------------ccccCCCCEEECcCCcccCcCChHHh-cCcCCCEE
Confidence            444444443333                                 44455566666666666666666554 57777777


Q ss_pred             EecCCccCCcCcccccCCCCCcEEecCCcc-ccccC
Q 047591          346 YLWGNNLSGVIPSSICNASKLTVLELSRNL-FSGLV  380 (1624)
Q Consensus       346 ~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~-l~g~~  380 (1624)
                      +|++|+++|.+|.. .++++|+.|++++|. +.|.+
T Consensus       274 ~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~p  308 (313)
T 1ogq_A          274 NVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGSP  308 (313)
T ss_dssp             ECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEESTT
T ss_pred             ECcCCcccccCCCC-ccccccChHHhcCCCCccCCC
Confidence            77777777777765 677778888888876 66643


No 62 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=1.5e-40  Score=396.16  Aligned_cols=262  Identities=24%  Similarity=0.385  Sum_probs=216.5

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||+|++........+.|.+|++++++++||||+++++++.+++..++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            45677789999999999999885 58899999887666667789999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcc-
Q 047591         1414 PQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK- 1492 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~- 1492 (1624)
                      ++|+|.+++......+++.++..|+.|+++||+|||+   .+|+||||||+|||+++++.+||+|||+++......... 
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  166 (310)
T 3s95_A           90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE  166 (310)
T ss_dssp             TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred             CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence            9999999999877779999999999999999999996   799999999999999999999999999998765332211 


Q ss_pred             ------------ccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHH
Q 047591         1493 ------------QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTD 1560 (1624)
Q Consensus      1493 ------------~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~ 1560 (1624)
                                  .....||+.|+|||++.+..++.++|||||||++|||++|..|+............        ....
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~--------~~~~  238 (310)
T 3s95_A          167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL--------NVRG  238 (310)
T ss_dssp             -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB--------CHHH
T ss_pred             ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh--------hhhc
Confidence                        11457999999999999999999999999999999999999998654322211100        0111


Q ss_pred             HHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1561 VIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1561 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      ..+...           +..++..+.+++.+||+.||++|||+.|+++.|++++....
T Consensus       239 ~~~~~~-----------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~  285 (310)
T 3s95_A          239 FLDRYC-----------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA  285 (310)
T ss_dssp             HHHHTC-----------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             cccccC-----------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence            111111           12345567889999999999999999999999999987654


No 63 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=8.3e-41  Score=422.99  Aligned_cols=247  Identities=21%  Similarity=0.274  Sum_probs=196.2

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHH---HHHHHHHHhcCCCceeEEEeeeccCCeeE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSF---DAECEVMRRIRHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f---~~E~~~l~~l~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      ++|...++||+|+||+||+|+.. +|+.||||+++...   ......+   .+++++++.++|||||++++++.+++..|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            56888899999999999999875 68999999986432   1122233   44466777889999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      +|||||++|+|.++|.+.+ .+++.....|+.||+.||+|||+   .+||||||||+|||||.+|++||+|||+|+.+..
T Consensus       269 lVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~  344 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK  344 (689)
T ss_dssp             EEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence            9999999999999998754 57888888999999999999995   8999999999999999999999999999998753


Q ss_pred             CCCccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccch-hhhhhhhhcCChhHHHHHhhh
Q 047591         1488 VDSMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEV-CLKHWVEESLPDAVTDVIDAN 1565 (1624)
Q Consensus      1488 ~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~-~l~~~~~~~~~~~~~~~~d~~ 1565 (1624)
                      .   ...+.+||+.|||||++.. ..|+.++||||+||++|||+||+.||.+...... .+..           .+....
T Consensus       345 ~---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~-----------~i~~~~  410 (689)
T 3v5w_A          345 K---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR-----------MTLTMA  410 (689)
T ss_dssp             C---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHH-----------HHHHCC
T ss_pred             C---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-----------hhcCCC
Confidence            3   2344689999999999864 5799999999999999999999999965321111 0000           011110


Q ss_pred             ccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047591         1566 LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMN-----VKDALA 1608 (1624)
Q Consensus      1566 l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt-----~~evl~ 1608 (1624)
                      ..         .+...+..+.+++.+|++.||++|++     ++||.+
T Consensus       411 ~~---------~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          411 VE---------LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             CC---------CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             CC---------CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            00         01123456788999999999999998     577654


No 64 
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00  E-value=4.8e-40  Score=411.88  Aligned_cols=366  Identities=18%  Similarity=0.153  Sum_probs=232.7

Q ss_pred             CCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCC
Q 047591          100 GLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLP  179 (1624)
Q Consensus       100 ~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP  179 (1624)
                      +..+..+..++++++|++|++++|++++ +| .++.+++|++|+|++|+|++ +|   ++.+++|++|+|++|+|++ +|
T Consensus        29 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~---~~~l~~L~~L~Ls~N~l~~-~~  101 (457)
T 3bz5_A           29 EMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD---LSQNTNLTYLACDSNKLTN-LD  101 (457)
T ss_dssp             TCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSC-CC
T ss_pred             CcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec---cccCCCCCEEECcCCCCce-ee
Confidence            3445556677888888888888888886 45 68888888888888888876 33   4677888888888888876 33


Q ss_pred             ccccCCCcccccccccccccccccCcccccccccceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCC
Q 047591          180 SSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLP  259 (1624)
Q Consensus       180 ~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~  259 (1624)
                        ++++++|++|+|++|++++ +|  ++++++|++|++++|++++ +|  ++++++|++|++++|+..+.++   +..++
T Consensus       102 --~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~---~~~l~  170 (457)
T 3bz5_A          102 --VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLD---VTPQT  170 (457)
T ss_dssp             --CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCC---CTTCT
T ss_pred             --cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccc---cccCC
Confidence              7777888888888888775 44  7777777777777777776 33  5666666666666665555443   23455


Q ss_pred             CCcEeecccccccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccC
Q 047591          260 SLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINL  339 (1624)
Q Consensus       260 ~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l  339 (1624)
                      +|++|++++|++++ +|  ++.+++                                |+.|++++|++++. +  + ..+
T Consensus       171 ~L~~L~ls~n~l~~-l~--l~~l~~--------------------------------L~~L~l~~N~l~~~-~--l-~~l  211 (457)
T 3bz5_A          171 QLTTLDCSFNKITE-LD--VSQNKL--------------------------------LNRLNCDTNNITKL-D--L-NQN  211 (457)
T ss_dssp             TCCEEECCSSCCCC-CC--CTTCTT--------------------------------CCEEECCSSCCSCC-C--C-TTC
T ss_pred             cCCEEECCCCccce-ec--cccCCC--------------------------------CCEEECcCCcCCee-c--c-ccC
Confidence            55555555555554 22  444444                                44444444444432 1  1 256


Q ss_pred             CCccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEccccccccCCCCCCccccccccccc
Q 047591          340 PNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCR  419 (1624)
Q Consensus       340 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~  419 (1624)
                      ++|++|+|++|++++ +|  ++.+++|++|+|++|++++.+   ++.+++|+.|++++|++                   
T Consensus       212 ~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~L-------------------  266 (457)
T 3bz5_A          212 IQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTDL-------------------  266 (457)
T ss_dssp             TTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCCC-------------------
T ss_pred             CCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCCC-------------------
Confidence            777777777777776 45  677777888888888777764   34556667776665533                   


Q ss_pred             ccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEeccCCccCCCccchhccccccceecc
Q 047591          420 YLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDL  499 (1624)
Q Consensus       420 ~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~L  499 (1624)
                                                 +.+++++|.+.|.+|  ++.+++|+.|+|++|.+.+.+|.   ...+|+.|++
T Consensus       267 ---------------------------~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l  314 (457)
T 3bz5_A          267 ---------------------------LEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDL  314 (457)
T ss_dssp             ---------------------------SCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCC
T ss_pred             ---------------------------CEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEech
Confidence                                       223333444444444  34566677777777776666664   3355666665


Q ss_pred             cccccccCCCccccCCCCCceeecccccccCCCccccccccCCccccccCccccccCchhhccccccceeecccccccCC
Q 047591          500 SYNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGC  579 (1624)
Q Consensus       500 s~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~  579 (1624)
                      ++|             ++|+.|+|++|+|+| +|  ++++++|+.|++++|+++|        ++.|..|++++|.++|.
T Consensus       315 ~~~-------------~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~  370 (457)
T 3bz5_A          315 SQN-------------PKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE  370 (457)
T ss_dssp             TTC-------------TTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE
T ss_pred             hhc-------------ccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec
Confidence            555             466777777777776 33  6667777777777777765        13445555666666654


Q ss_pred             CCcccccccccceeeccCCcCCCCccccc
Q 047591          580 LPQDIGNLKVLTGLYLSGNQLSCSIPSSI  608 (1624)
Q Consensus       580 iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~  608 (1624)
                           +++..|+.++|++|+|+|.||..+
T Consensus       371 -----~~~~~l~~l~l~~N~l~g~ip~~~  394 (457)
T 3bz5_A          371 -----GQTITMPKETLTNNSLTIAVSPDL  394 (457)
T ss_dssp             -----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred             -----ceeeecCccccccCcEEEEcChhH
Confidence                 244455555566666555555543


No 65 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=6.3e-41  Score=401.46  Aligned_cols=282  Identities=33%  Similarity=0.566  Sum_probs=226.2

Q ss_pred             ccCHHHHHHHhCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccC
Q 047591         1324 RISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNP 1403 (1624)
Q Consensus      1324 ~~~~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~ 1403 (1624)
                      ++++.++..++++|...+.||+|+||+||+|++.+++.||||++........+.|.+|++++++++||||++++++|.+.
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            34445566688999999999999999999999888999999998766556678899999999999999999999999999


Q ss_pred             CeeEEEEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeec
Q 047591         1404 GFKALILQYMPQGSLEKWLYSHN---YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFG 1480 (1624)
Q Consensus      1404 ~~~~lV~ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFG 1480 (1624)
                      +..++||||+++|+|.+++....   ..++|.++++++.|+++||+|||+   .+|+||||||+||+++.++.+||+|||
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg  184 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFG  184 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCT
T ss_pred             CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeecc
Confidence            99999999999999999987543   358999999999999999999996   799999999999999999999999999


Q ss_pred             ceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccc-hhhhhhhhhcC-Chh
Q 047591         1481 IAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE-VCLKHWVEESL-PDA 1557 (1624)
Q Consensus      1481 la~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~-~~l~~~~~~~~-~~~ 1557 (1624)
                      +++....... .......||+.|+|||++.+..++.++|||||||++|||+||+.||......+ .....|..... ...
T Consensus       185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  264 (321)
T 2qkw_B          185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ  264 (321)
T ss_dssp             TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred             cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence            9987643222 22234569999999999888899999999999999999999999987543221 22223322111 001


Q ss_pred             HHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 047591         1558 VTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKT 1615 (1624)
Q Consensus      1558 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~ 1615 (1624)
                      ....+++.+...       ....++..+.+++.+||+.||++|||++|+++.|+.+..
T Consensus       265 ~~~~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          265 LEQIVDPNLADK-------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             CCSSSSSSCTTC-------SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHhcChhhccc-------cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            111122221111       113456788999999999999999999999999998764


No 66 
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00  E-value=2.9e-40  Score=415.64  Aligned_cols=376  Identities=20%  Similarity=0.159  Sum_probs=255.4

Q ss_pred             ccccceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEeecccccccCcCCccccccCcCCeee
Q 047591          210 TELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLG  289 (1624)
Q Consensus       210 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~  289 (1624)
                      ++|++|+|++|++++..|..+.++++|++|+|++|.+.+.+|...+.++++|++|+|++|++++.+|..|+++++|++|+
T Consensus        30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~  109 (455)
T 3v47_A           30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT  109 (455)
T ss_dssp             TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred             CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence            34444444444444444444444444455555555444455555555666666666666666666677777777777777


Q ss_pred             ccCCcccccCccccccccccc--cccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCC--CC
Q 047591          290 LRDNQLTDFGANNLTGLIPSI--IFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNA--SK  365 (1624)
Q Consensus       290 Ls~N~l~~l~~n~l~g~ip~~--~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l--~~  365 (1624)
                      |++|+++        +.+|..  +.++.+|++|+|++|++++..|..++.++++|++|+|++|++++..|..+..+  .+
T Consensus       110 L~~n~l~--------~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~  181 (455)
T 3v47_A          110 LTQCNLD--------GAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKH  181 (455)
T ss_dssp             CTTSCCB--------THHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCE
T ss_pred             CCCCCCC--------ccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccc
Confidence            7666543        333333  55556666666666666655555544456666666666666666666666554  45


Q ss_pred             CcEEecCCccccccCcccccccccccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCcc--
Q 047591          366 LTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLS--  443 (1624)
Q Consensus       366 L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~--  443 (1624)
                      |+.|++++|.+.+..+..++.                       .....+..+++|++|++++|.+.+.+|..+....  
T Consensus       182 L~~L~l~~n~l~~~~~~~~~~-----------------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~  238 (455)
T 3v47_A          182 FTLLRLSSITLQDMNEYWLGW-----------------------EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAG  238 (455)
T ss_dssp             EEEEECTTCBCTTCSTTCTTH-----------------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTT
T ss_pred             ccccccccCcccccchhhccc-----------------------cccccccccceeeeEecCCCcccccchhhhhccccc
Confidence            666666666666554433220                       0011122334455555555555544444333220  


Q ss_pred             ccchhhccCCcccCCCCCCCcCCCCcccEEeccCCccCCCccchhccc--cccceecccccccccCCCccccCCCCCcee
Q 047591          444 KSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKL--QNLQGLDLSYNNIQGSIPSELCQLESLNTL  521 (1624)
Q Consensus       444 ~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~iP~~~~~l--~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L  521 (1624)
                      ..++.|++++|.+.+..              +..+.+.+..+..+..+  ++|++|+|++|++++.+|..++.+++|+.|
T Consensus       239 ~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L  304 (455)
T 3v47_A          239 TKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQL  304 (455)
T ss_dssp             CCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred             cceeeEeeccccccccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEE
Confidence            13444555554443321              12223333333344433  689999999999999999999999999999


Q ss_pred             ecccccccCCCccccccccCCccccccCccccccCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCC
Q 047591          522 LLQGNALQNQIPTCLANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLS  601 (1624)
Q Consensus       522 ~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~  601 (1624)
                      +|++|++++..|..|+++++|++|+|++|++++..|..|..+.+|+.|||++|++++..|.+++.+++|+.|+|++|+++
T Consensus       305 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~  384 (455)
T 3v47_A          305 TLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK  384 (455)
T ss_dssp             ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred             ECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccc
Confidence            99999999988999999999999999999999988999999999999999999999988999999999999999999999


Q ss_pred             CCccccccCCccccccccccCCCCCCCch
Q 047591          602 CSIPSSIGGLKDLTYLALARNGFQGSIPE  630 (1624)
Q Consensus       602 g~iP~~~~~l~~L~~L~ls~N~l~g~iP~  630 (1624)
                      +..+..++.+++|++|++++|++++.+|.
T Consensus       385 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~  413 (455)
T 3v47_A          385 SVPDGIFDRLTSLQKIWLHTNPWDCSCPR  413 (455)
T ss_dssp             CCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred             cCCHhHhccCCcccEEEccCCCcccCCCc
Confidence            86666789999999999999999999984


No 67 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=2.4e-40  Score=389.24  Aligned_cols=197  Identities=26%  Similarity=0.429  Sum_probs=159.9

Q ss_pred             CCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeccCC--------
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCSNHG--------  813 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--------  813 (1624)
                      ++|+..+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            3588889999999999999986 4799999999975543 34567999999999999999999999986543        


Q ss_pred             ----eEEEEEEecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEe
Q 047591          814 ----FKALILEYMPQGSLEKWLYSHKY--TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSD  887 (1624)
Q Consensus       814 ----~~~lV~Ey~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~D  887 (1624)
                          ..|+|||||++|+|.+++.....  ..++..+..|+.||++||+|||+.   +||||||||+|||++.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence                37999999999999999986542  345667889999999999999994   599999999999999999999999


Q ss_pred             eeeeeccCCCCCc-----------ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCC
Q 047591          888 FGISKLLDGEDSV-----------TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTD  946 (1624)
Q Consensus       888 FGla~~~~~~~~~-----------~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~  946 (1624)
                      ||+|+........           ..+..+||+.|||||++.+..|+.++|||||||++|||++   ||.
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~  228 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFS  228 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCS
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCC
Confidence            9999987543221           1233579999999999999999999999999999999996   764


No 68 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=5.2e-39  Score=382.06  Aligned_cols=281  Identities=28%  Similarity=0.459  Sum_probs=226.3

Q ss_pred             hccccCHHHHHHHhCCCCcC------CeEeecCceEEEEEEEcCCceEEEEEeccc----hhhHHHHHHHHHHHHHhcCC
Q 047591         1321 ALRRISYQELRLATNGFSES------NLLGTGIFSSVYKATFADGTNAAIKIFSLQ----EDRALKSFDAECEVMRRIRH 1390 (1624)
Q Consensus      1321 ~~~~~~~~~l~~at~~f~~~------~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~----~~~~~~~f~~E~~~l~~l~H 1390 (1624)
                      ....|++.++..++++|+..      +.||+|+||+||+|++ +++.||||++...    .....+.|.+|++++++++|
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            35779999999999999988      8999999999999987 6889999998642    23456789999999999999


Q ss_pred             CceeEEEeeeccCCeeEEEEEecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe
Q 047591         1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSH--NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL 1468 (1624)
Q Consensus      1391 pNIv~l~g~~~~~~~~~lV~ey~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl 1468 (1624)
                      |||+++++++.+.+..++||||+++|+|.+++...  ...+++..+..++.|++.||+|||+   .+|+||||||+||++
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili  166 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILL  166 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEE
Confidence            99999999999999999999999999999999743  3468999999999999999999996   799999999999999


Q ss_pred             cCCCcEEEeeecceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhh
Q 047591         1469 DDDMVAHLGDFGIAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547 (1624)
Q Consensus      1469 d~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~ 1547 (1624)
                      ++++.+||+|||+++....... .......||+.|+|||...+ .++.++|||||||++|||+||+.||+...... ...
T Consensus       167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~  244 (307)
T 2nru_A          167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLL  244 (307)
T ss_dssp             CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTT
T ss_pred             cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHH
Confidence            9999999999999987654322 12234579999999998764 58999999999999999999999997643221 111


Q ss_pred             hhhhh--cCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 047591         1548 HWVEE--SLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKT 1615 (1624)
Q Consensus      1548 ~~~~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~ 1615 (1624)
                      .+...  .....+.+.++..+...        ...++..+.+++.+||+.+|++|||++|+++.|++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          245 DIKEEIEDEEKTIEDYIDKKMNDA--------DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             HHHHHHHTTSCCHHHHSCSSCSCC--------CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             HHHHHhhhhhhhhhhhcccccccc--------chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            12111  11112233333322111        12346678899999999999999999999999998764


No 69 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=7.6e-40  Score=392.24  Aligned_cols=277  Identities=21%  Similarity=0.286  Sum_probs=209.4

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC----eeEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG----FKALI 1409 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~----~~~lV 1409 (1624)
                      .++|...+.||+|+||+||+|++. ++.||||++.... .....+.+|+.++++++|||||++++++.+..    ..++|
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            356777889999999999999875 7899999996543 33455677999999999999999999997644    36999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhc-------CCCceEEcCCCCCcEEecCCCcEEEeeecce
Q 047591         1410 LQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-------YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIA 1482 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~-------~~~~iiHrDlK~~NILld~~~~~kl~DFGla 1482 (1624)
                      |||+++|+|.++++..  .+++..+..|+.|+++||+|||+.       +.++|+||||||+|||++.++.+||+|||+|
T Consensus       101 ~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a  178 (322)
T 3soc_A          101 TAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA  178 (322)
T ss_dssp             EECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence            9999999999999764  489999999999999999999962       1129999999999999999999999999999


Q ss_pred             eecCCCCCc-cccccccccccccccccCC-----CCcCcccchHHHHHHHHHHHcCCCCCCCCCccch-hhhhhhhhcC-
Q 047591         1483 KLLDGVDSM-KQTMTLATIGYMAPEYGSE-----GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEV-CLKHWVEESL- 1554 (1624)
Q Consensus      1483 ~~~~~~~~~-~~~~~~gt~~y~APE~~~~-----~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~-~l~~~~~~~~- 1554 (1624)
                      +........ ......||+.|+|||++.+     ..++.++|||||||++|||+||+.||........ .......... 
T Consensus       179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~  258 (322)
T 3soc_A          179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS  258 (322)
T ss_dssp             EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred             cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence            877543322 2234579999999998876     4677889999999999999999999975432211 1111111000 


Q ss_pred             ChhHHHHHhhh-ccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1555 PDAVTDVIDAN-LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1555 ~~~~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      .+...+.+... .......  ......++..+.+++.+||+.||++|||++||++.|+++++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          259 LEDMQEVVVHKKKRPVLRD--YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHHHHHHHTTSCCCCCCCG--GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhcccCCCCccc--cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            01111111111 1111000  001123566789999999999999999999999999999764


No 70 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=2.3e-39  Score=395.46  Aligned_cols=259  Identities=25%  Similarity=0.455  Sum_probs=212.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc--------CCceEEEEEeccc-hhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCC
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA--------DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPG 1404 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~--------~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~ 1404 (1624)
                      ++|...+.||+|+||+||+|++.        ++..||||+++.. .....+.+.+|+++++++ +|||||+++++|.+.+
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  160 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  160 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence            56777889999999999999863        3456999998644 344567899999999999 8999999999999999


Q ss_pred             eeEEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEec
Q 047591         1405 FKALILQYMPQGSLEKWLYSHN---------------YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLD 1469 (1624)
Q Consensus      1405 ~~~lV~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld 1469 (1624)
                      ..++||||+++|+|.+++....               ..+++.+++.++.||++||+|||+   .+|+||||||+|||++
T Consensus       161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~  237 (370)
T 2psq_A          161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVT  237 (370)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEC
T ss_pred             CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEEC
Confidence            9999999999999999998643               347899999999999999999996   7999999999999999


Q ss_pred             CCCcEEEeeecceeecCCCCCc-cccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhh
Q 047591         1470 DDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLK 1547 (1624)
Q Consensus      1470 ~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~ 1547 (1624)
                      .++.+||+|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||.+....+.  .
T Consensus       238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~--~  315 (370)
T 2psq_A          238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL--F  315 (370)
T ss_dssp             TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--H
T ss_pred             CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH--H
Confidence            9999999999999977543322 2234567899999999988899999999999999999999 9999875422111  1


Q ss_pred             hhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1548 HWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1548 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                                  ..+.......       .+..++..+.+++.+||+.+|++|||+.|+++.|+++.+..
T Consensus       316 ------------~~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~  366 (370)
T 2psq_A          316 ------------KLLKEGHRMD-------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  366 (370)
T ss_dssp             ------------HHHHTTCCCC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ------------HHHhcCCCCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence                        1111111000       01234567889999999999999999999999999987654


No 71 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=6e-40  Score=401.89  Aligned_cols=260  Identities=21%  Similarity=0.366  Sum_probs=213.8

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ..++|...+.||+|+||+||+|++. +++.||||+++... ....+.|.+|+++|++++|||||+++++|.+++..++||
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  191 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM  191 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence            3456777889999999999999986 68899999986432 334567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      |||++|+|.++++..+..+++.+++.++.|||+||+|||+   .+|+||||||+|||+++++.+||+|||+|+.......
T Consensus       192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~  268 (377)
T 3cbl_A          192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY  268 (377)
T ss_dssp             ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred             EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence            9999999999998777778999999999999999999996   7999999999999999999999999999987543221


Q ss_pred             cc-ccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1491 MK-QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1491 ~~-~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                      .. .....+++.|+|||.+..+.++.++|||||||++|||+| |+.||......+  .            .+.+......
T Consensus       269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~------------~~~~~~~~~~  334 (377)
T 3cbl_A          269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--T------------REFVEKGGRL  334 (377)
T ss_dssp             ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--H------------HHHHHTTCCC
T ss_pred             eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--H------------HHHHHcCCCC
Confidence            11 122346788999999988899999999999999999999 999987543211  1            1111111100


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      .       .+..++..+.+++.+||+.+|++|||++|+++.|++++.+
T Consensus       335 ~-------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          335 P-------CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             C-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             C-------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            0       0123566788999999999999999999999999999875


No 72 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.6e-39  Score=378.43  Aligned_cols=258  Identities=24%  Similarity=0.375  Sum_probs=213.4

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      .++|...+.||+|+||+||+|++.++..||||+++... ...+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            45677788999999999999999888899999986433 23467899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCccc
Q 047591         1414 PQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQ 1493 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 1493 (1624)
                      ++|+|.+++...+..+++.++..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++..........
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  162 (268)
T 3sxs_A           86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS  162 (268)
T ss_dssp             TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred             CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence            9999999998776678999999999999999999996   7999999999999999999999999999987765443334


Q ss_pred             cccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchH
Q 047591         1494 TMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEE 1572 (1624)
Q Consensus      1494 ~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 1572 (1624)
                      ....+|+.|+|||...+..++.++|||||||++|||+| |+.||+........ ...            ........   
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~~------------~~~~~~~~---  226 (268)
T 3sxs_A          163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV-LKV------------SQGHRLYR---  226 (268)
T ss_dssp             CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HHH------------HTTCCCCC---
T ss_pred             cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH-HHH------------HcCCCCCC---
Confidence            44567888999999988889999999999999999999 99998754322111 000            00000000   


Q ss_pred             HHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1573 ADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1573 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                           +..++..+.+++.+||+.+|++|||++|+++.|++++.+
T Consensus       227 -----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          227 -----PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             -----CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             -----CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence                 011345678899999999999999999999999988655


No 73 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=2.2e-39  Score=388.60  Aligned_cols=258  Identities=23%  Similarity=0.400  Sum_probs=209.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc----CCceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA----DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~----~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      +.|...+.||+|+||+||+|++.    .+..||||+++.. .....+.|.+|++++++++||||+++++++.+.+..++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            35666789999999999999884    3445999998754 344567899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC
Q 047591         1410 LQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~ 1489 (1624)
                      |||+++|+|.++++.....+++.+++.|+.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  205 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP  205 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred             eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence            99999999999998776779999999999999999999996   799999999999999999999999999999875432


Q ss_pred             Cc--cccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhc
Q 047591         1490 SM--KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANL 1566 (1624)
Q Consensus      1490 ~~--~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 1566 (1624)
                      ..  ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......+.              .+.+....
T Consensus       206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--------------~~~~~~~~  271 (325)
T 3kul_A          206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV--------------ISSVEEGY  271 (325)
T ss_dssp             -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH--------------HHHHHTTC
T ss_pred             cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH--------------HHHHHcCC
Confidence            21  2223456889999999988899999999999999999999 9999865422111              11111110


Q ss_pred             cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1567 LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1567 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      ...       .+..++..+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus       272 ~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          272 RLP-------APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             CCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             CCC-------CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            000       0123456788999999999999999999999999998754


No 74 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=1.6e-39  Score=397.18  Aligned_cols=258  Identities=21%  Similarity=0.416  Sum_probs=201.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc----CCceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA----DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~----~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      ++|...+.||+|+||+||+|++.    ++..||||+++.. .....+.|.+|++++++++||||++++++|.+.+..++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            46788899999999999999875    4678999998754 344567899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC
Q 047591         1410 LQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~ 1489 (1624)
                      |||+++|+|.+++++.+..+++.+++.|+.||++||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  201 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP  201 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence            99999999999998877779999999999999999999996   799999999999999999999999999998765432


Q ss_pred             Ccc--ccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhc
Q 047591         1490 SMK--QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANL 1566 (1624)
Q Consensus      1490 ~~~--~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 1566 (1624)
                      ...  .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+              +.+.++...
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--------------~~~~i~~~~  267 (373)
T 2qol_A          202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------------VIKAVDEGY  267 (373)
T ss_dssp             ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--------------HHHHHHTTE
T ss_pred             ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--------------HHHHHHcCC
Confidence            211  122346788999999988899999999999999999998 999986542211              111122111


Q ss_pred             cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1567 LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1567 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      ....       +..++..+.+++.+||+.+|++||+|.|+++.|+++...
T Consensus       268 ~~~~-------~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          268 RLPP-------PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             ECCC-------CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCCC-------CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            1100       123456788999999999999999999999999998654


No 75 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=5.7e-39  Score=379.95  Aligned_cols=250  Identities=25%  Similarity=0.331  Sum_probs=207.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1335 NGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      +.|...+.||+|+||+||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   99 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECC
Confidence            5688889999999999999986 468899999997665555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCccc
Q 047591         1414 PQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQ 1493 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 1493 (1624)
                      ++|+|.+++.+.  .+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+....... ..
T Consensus       100 ~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~  173 (297)
T 3fxz_A          100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KR  173 (297)
T ss_dssp             TTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-CB
T ss_pred             CCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-cc
Confidence            999999999765  47899999999999999999997   7999999999999999999999999999987754332 33


Q ss_pred             cccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHH
Q 047591         1494 TMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEA 1573 (1624)
Q Consensus      1494 ~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 1573 (1624)
                      ....||+.|+|||++.+..++.++|||||||++|||+||+.||........ .........+         . ..     
T Consensus       174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~---------~-~~-----  237 (297)
T 3fxz_A          174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTP---------E-LQ-----  237 (297)
T ss_dssp             CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHCSC---------C-CS-----
T ss_pred             CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCC---------C-CC-----
Confidence            446799999999999889999999999999999999999999965322111 0000000000         0 00     


Q ss_pred             HHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1574 DIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1574 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                         .+..++..+.+++.+||+.||++|||++|+++.
T Consensus       238 ---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          238 ---NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             ---CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ---CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence               012345567889999999999999999999863


No 76 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=1.8e-39  Score=386.49  Aligned_cols=264  Identities=24%  Similarity=0.410  Sum_probs=203.5

Q ss_pred             HHHHHHhCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCe
Q 047591         1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGF 1405 (1624)
Q Consensus      1328 ~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~ 1405 (1624)
                      .++....++|...+.||+|+||+||+|++ +|+.||||++....  ....++|.+|++++++++||||+++++++.+.+.
T Consensus        30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 3p86_A           30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN  108 (309)
T ss_dssp             --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred             ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence            33344456788889999999999999987 68889999986442  3456789999999999999999999999999999


Q ss_pred             eEEEEEecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCc--eEEcCCCCCcEEecCCCcEEEeeecc
Q 047591         1406 KALILQYMPQGSLEKWLYSHNY--LLNIEQRLDIMIDVACALEYLHQGYSTS--IIHCDLKPSNVLLDDDMVAHLGDFGI 1481 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~--iiHrDlK~~NILld~~~~~kl~DFGl 1481 (1624)
                      .++||||+++|+|.+++...+.  .+++..++.++.|++.||+|||+   .+  |+||||||+|||++.++.+||+|||+
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~  185 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGL  185 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-
T ss_pred             eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCC
Confidence            9999999999999999986542  38999999999999999999996   56  99999999999999999999999999


Q ss_pred             eeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHH
Q 047591         1482 AKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDV 1561 (1624)
Q Consensus      1482 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~ 1561 (1624)
                      |+...... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||......+.  ...+.          
T Consensus       186 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~--~~~~~----------  252 (309)
T 3p86_A          186 SRLKASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV--VAAVG----------  252 (309)
T ss_dssp             -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHH----------
T ss_pred             Cccccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH----------
Confidence            98654322 223345799999999999999999999999999999999999999975422111  00000          


Q ss_pred             HhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1562 IDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1562 ~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                       .......       .+..++..+.+++.+||+.+|++|||++|+++.|+++.+.
T Consensus       253 -~~~~~~~-------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          253 -FKCKRLE-------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             -HSCCCCC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             -hcCCCCC-------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence             0000000       0113445688999999999999999999999999988654


No 77 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.8e-39  Score=378.42  Aligned_cols=257  Identities=25%  Similarity=0.402  Sum_probs=212.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEecC
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMP 1414 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~~ 1414 (1624)
                      ++|...+.||+|+||+||+|++.+++.||||++.... ...++|.+|++++++++||||+++++++.+++..++||||++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            4567778999999999999999888899999986432 234679999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcccc
Q 047591         1415 QGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT 1494 (1624)
Q Consensus      1415 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 1494 (1624)
                      +|+|.+++......+++..+..++.|+++||+|||+   .+|+||||||+||+++.++.+||+|||+++...........
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  165 (269)
T 4hcu_A           89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  165 (269)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence            999999998777779999999999999999999996   78999999999999999999999999999876543333334


Q ss_pred             ccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHH
Q 047591         1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEA 1573 (1624)
Q Consensus      1495 ~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 1573 (1624)
                      ...||+.|+|||......++.++||||+||++|||+| |+.||......+. ...             +........   
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~-~~~-------------~~~~~~~~~---  228 (269)
T 4hcu_A          166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-VED-------------ISTGFRLYK---  228 (269)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-HHH-------------HHTTCCCCC---
T ss_pred             CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH-HHH-------------HhcCccCCC---
Confidence            4567889999999988899999999999999999999 8999875322111 110             111000000   


Q ss_pred             HHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1574 DIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1574 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                          +..++..+.+++.+||+.+|++|||++|+++.|+++..+
T Consensus       229 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          229 ----PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             ----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ----CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence                012345678899999999999999999999999998753


No 78 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.8e-39  Score=383.77  Aligned_cols=270  Identities=23%  Similarity=0.392  Sum_probs=209.9

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-----CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeecc--CCeeE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-----DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN--PGFKA 1407 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-----~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~--~~~~~ 1407 (1624)
                      +.|...+.||+|+||+||+|++.     +++.||||++........+.|.+|++++++++||||++++++|..  ....+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            45667789999999999999852     578899999986666667889999999999999999999999854  35689


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      +||||+++|+|.+++......+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+....
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~  166 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ  166 (295)
T ss_dssp             EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred             EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence            9999999999999998877778999999999999999999996   7999999999999999999999999999987653


Q ss_pred             CCC--ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhc-CChh----HHH
Q 047591         1488 VDS--MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEES-LPDA----VTD 1560 (1624)
Q Consensus      1488 ~~~--~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~-~~~~----~~~ 1560 (1624)
                      ...  .......||+.|+|||.+.+..++.++|||||||++|||+||..|+......   ...+.... ....    ..+
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  243 (295)
T 3ugc_A          167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLIE  243 (295)
T ss_dssp             ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHHH
T ss_pred             CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHHH
Confidence            321  1122345788899999998889999999999999999999999998642111   11111111 1111    111


Q ss_pred             HHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1561 VIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1561 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                      .+......       ..+..++..+.+++.+||+.+|++|||++|+++.|++++..+
T Consensus       244 ~~~~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          244 LLKNNGRL-------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             HHHTTCCC-------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHhccCcC-------CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            11111000       011245678899999999999999999999999999987653


No 79 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=8e-39  Score=383.04  Aligned_cols=262  Identities=23%  Similarity=0.297  Sum_probs=213.8

Q ss_pred             cccCHHHHHHHhCC----------CCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCC
Q 047591         1323 RRISYQELRLATNG----------FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHR 1391 (1624)
Q Consensus      1323 ~~~~~~~l~~at~~----------f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~Hp 1391 (1624)
                      ..+++++++.+++.          |...+.||+|+||+||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            45788888888764          555678999999999999886 6899999999766555567899999999999999


Q ss_pred             ceeEEEeeeccCCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCC
Q 047591         1392 NLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDD 1471 (1624)
Q Consensus      1392 NIv~l~g~~~~~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~ 1471 (1624)
                      ||+++++++...+..++||||+++|+|.+++.+  ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.+
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~  177 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLD  177 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTT
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCC
Confidence            999999999999999999999999999999864  358999999999999999999997   799999999999999999


Q ss_pred             CcEEEeeecceeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhh
Q 047591         1472 MVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551 (1624)
Q Consensus      1472 ~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~ 1551 (1624)
                      +.+||+|||+++...... .......||+.|+|||+..+..++.++|||||||++|||+||+.||.......  ....+.
T Consensus       178 ~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~~~~~  254 (321)
T 2c30_A          178 GRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLR  254 (321)
T ss_dssp             CCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHH
T ss_pred             CcEEEeeeeeeeecccCc-cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHh
Confidence            999999999998775432 22344579999999999999999999999999999999999999996532111  111111


Q ss_pred             hcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1552 ESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1552 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ...+        +.+ .        ....++..+.+++.+||+.||++|||++|+++.
T Consensus       255 ~~~~--------~~~-~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          255 DSPP--------PKL-K--------NSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HSSC--------CCC-T--------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cCCC--------CCc-C--------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1000        000 0        011234567889999999999999999999874


No 80 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=7e-39  Score=379.64  Aligned_cols=263  Identities=25%  Similarity=0.364  Sum_probs=200.9

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHh--cCCCceeEEEeeecc----CCeeE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRR--IRHRNLAKIVSSCSN----PGFKA 1407 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~--l~HpNIv~l~g~~~~----~~~~~ 1407 (1624)
                      .++|...+.||+|+||+||+|++ +++.||||++....   .+.+.+|.+++..  ++||||+++++++..    ....+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            35677889999999999999988 68899999986432   3556677777776  799999999998643    34579


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCceEEcCCCCCcEEecCCCcEEEeeecce
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-----YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIA 1482 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~-----~~~~iiHrDlK~~NILld~~~~~kl~DFGla 1482 (1624)
                      +||||+++|+|.++++.  ..+++..+++|+.|++.||+|||..     +..+|+||||||+|||++.++.+||+|||+|
T Consensus        83 lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  160 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA  160 (301)
T ss_dssp             EEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence            99999999999999954  3589999999999999999999931     1389999999999999999999999999999


Q ss_pred             eecCCCCCcc---ccccccccccccccccCCC------CcCcccchHHHHHHHHHHHcC----------CCCCCCCCccc
Q 047591         1483 KLLDGVDSMK---QTMTLATIGYMAPEYGSEG------IVSTSGDVYSFGILMMETLTR----------RKPTDDMFTGE 1543 (1624)
Q Consensus      1483 ~~~~~~~~~~---~~~~~gt~~y~APE~~~~~------~~~~k~DV~SfGvil~Elltg----------~~P~~~~~~~~ 1543 (1624)
                      +.........   .....||+.|+|||++.+.      .++.++|||||||++|||+||          +.||.+.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~  240 (301)
T 3q4u_A          161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND  240 (301)
T ss_dssp             EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence            8765433211   2234799999999988766      566899999999999999999          77775433222


Q ss_pred             hhhhhhhhhcCChhHHHHHhhh-ccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 047591         1544 VCLKHWVEESLPDAVTDVIDAN-LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKI 1613 (1624)
Q Consensus      1544 ~~l~~~~~~~~~~~~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i 1613 (1624)
                      ......         ...+... ........  .....++..+.+++.+||+.||++|||++|+++.|+++
T Consensus       241 ~~~~~~---------~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          241 PSFEDM---------RKVVCVDQQRPNIPNR--WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CCHHHH---------HHHHTTSCCCCCCCGG--GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cchhhh---------hHHHhccCCCCCCChh--hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            111111         1111000 00000000  01123567789999999999999999999999999976


No 81 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=4.3e-39  Score=399.36  Aligned_cols=264  Identities=19%  Similarity=0.253  Sum_probs=212.3

Q ss_pred             cCHHHHHHHhCCCCcCCeEeecCceEEEEEEEcC-CceEEEEEeccchh---hHHHHHHHHHHHHHhcCCCceeEEEeee
Q 047591         1325 ISYQELRLATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQED---RALKSFDAECEVMRRIRHRNLAKIVSSC 1400 (1624)
Q Consensus      1325 ~~~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~~-~~~vAvK~~~~~~~---~~~~~f~~E~~~l~~l~HpNIv~l~g~~ 1400 (1624)
                      ..+.+++..+++|...++||+|+||+||+|+... ++.||||+++....   ...+.+.+|+.+++.++|||||+++++|
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            3456777788999999999999999999999864 78899999864322   2234589999999999999999999999


Q ss_pred             ccCCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeec
Q 047591         1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFG 1480 (1624)
Q Consensus      1401 ~~~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFG 1480 (1624)
                      .+++..++|||||++|+|.+++.+....+++..+..|+.||+.||+|||+   .+||||||||+|||+|.++++||+|||
T Consensus       144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFG  220 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFG  220 (437)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             eeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchh
Confidence            99999999999999999999998766678999999999999999999996   799999999999999999999999999


Q ss_pred             ceeecCCCCCccccccccccccccccccC-----CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCC
Q 047591         1481 IAKLLDGVDSMKQTMTLATIGYMAPEYGS-----EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLP 1555 (1624)
Q Consensus      1481 la~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~ 1555 (1624)
                      +|+.............+||+.|||||++.     .+.++.++|||||||++|||+||+.||......+. ...       
T Consensus       221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-~~~-------  292 (437)
T 4aw2_A          221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGK-------  292 (437)
T ss_dssp             TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHH-------
T ss_pred             hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-HHh-------
Confidence            99877654444444568999999999876     56799999999999999999999999975322111 111       


Q ss_pred             hhHHHHHhhh-ccCCchHHHHHHHHHhHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 047591         1556 DAVTDVIDAN-LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEE--RMNVKDALAN 1609 (1624)
Q Consensus      1556 ~~~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~--RPt~~evl~~ 1609 (1624)
                           ++... ...-...     ...++..+.+++.+|+..+|++  ||+++|+++.
T Consensus       293 -----i~~~~~~~~~p~~-----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          293 -----IMNHKERFQFPTQ-----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             -----HHTHHHHCCCCSS-----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             -----hhhccccccCCcc-----cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence                 11100 0000000     0113456778999999888888  9999998763


No 82 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=1.1e-39  Score=409.31  Aligned_cols=261  Identities=26%  Similarity=0.425  Sum_probs=212.9

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      ..++|...+.||+|+||+||+|++.++..||||+++... ...+.|.+|+++|++++|||||++++++. .+..++||||
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~  263 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF  263 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred             chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence            345677788999999999999999888899999987433 34678999999999999999999999986 5678999999


Q ss_pred             cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCc
Q 047591         1413 MPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      |++|+|.++++.. +..+++.++++++.|||.||+|||+   .+|+||||||+|||++.++.+||+|||+|+........
T Consensus       264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~  340 (454)
T 1qcf_A          264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  340 (454)
T ss_dssp             CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred             cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence            9999999999854 3467899999999999999999996   79999999999999999999999999999876543222


Q ss_pred             cccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                      ......+|+.|+|||++..+.++.++|||||||++|||+| |+.||.+....+.              .+.+....... 
T Consensus       341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~--------------~~~i~~~~~~~-  405 (454)
T 1qcf_A          341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV--------------IRALERGYRMP-  405 (454)
T ss_dssp             TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--------------HHHHHHTCCCC-
T ss_pred             ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHH--------------HHHHHcCCCCC-
Confidence            2334457889999999988899999999999999999999 9999975432111              11111111100 


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFLK 1619 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~~ 1619 (1624)
                            .+..++..+.+++.+||+.+|++||||+++++.|+++.+....
T Consensus       406 ------~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~  448 (454)
T 1qcf_A          406 ------RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES  448 (454)
T ss_dssp             ------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCC
T ss_pred             ------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcccc
Confidence                  0124567789999999999999999999999999987654433


No 83 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=8.1e-39  Score=380.48  Aligned_cols=262  Identities=25%  Similarity=0.421  Sum_probs=205.4

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      .+.|...+.||+|+||+||+|++.  ..+|||+++..  .....+.|.+|++++++++||||+++++++. .+..++|||
T Consensus        35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e  111 (307)
T 3lb7_A           35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ  111 (307)
T ss_dssp             TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence            356777889999999999999864  46899988643  3345678999999999999999999999875 456799999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC-CC
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DS 1490 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~-~~ 1490 (1624)
                      |+++|+|.+++......+++.+++.|+.||+.||+|||+   .+|+||||||+|||+++++.+||+|||+|+..... ..
T Consensus       112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~  188 (307)
T 3lb7_A          112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS  188 (307)
T ss_dssp             CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred             cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence            999999999998777789999999999999999999997   79999999999999999999999999999865431 12


Q ss_pred             ccccccccccccccccccC---CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1491 MKQTMTLATIGYMAPEYGS---EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~---~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      .......||+.|+|||++.   ...++.++|||||||++|||+||+.||......+.....             +.....
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-------------~~~~~~  255 (307)
T 3lb7_A          189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM-------------VGRGYA  255 (307)
T ss_dssp             -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH-------------HHHTCC
T ss_pred             ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHH-------------HhcCCC
Confidence            2233457999999999875   667899999999999999999999999754332211111             110000


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                      .....   .....++..+.+++.+||+.+|++|||+.|+++.|+.++..+
T Consensus       256 ~~~~~---~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~  302 (307)
T 3lb7_A          256 SPDLS---KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             CCCST---TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             Ccchh---hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence            00000   001234567889999999999999999999999999987654


No 84 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=6e-39  Score=390.49  Aligned_cols=270  Identities=21%  Similarity=0.352  Sum_probs=216.1

Q ss_pred             ccCHHHHHHHhCCCCcCCeEeecCceEEEEEEEc------CCceEEEEEeccc-hhhHHHHHHHHHHHHHhc-CCCceeE
Q 047591         1324 RISYQELRLATNGFSESNLLGTGIFSSVYKATFA------DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRI-RHRNLAK 1395 (1624)
Q Consensus      1324 ~~~~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~------~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l-~HpNIv~ 1395 (1624)
                      .+...++....++|...+.||+|+||+||+|++.      +++.||||+++.. .....+.|.+|+++++++ +|||||+
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            3455666777888999999999999999999752      3578999999653 334467899999999999 8999999


Q ss_pred             EEeeeccCCe-eEEEEEecCCCCHHHHHHhcCC-----------------------------------------------
Q 047591         1396 IVSSCSNPGF-KALILQYMPQGSLEKWLYSHNY----------------------------------------------- 1427 (1624)
Q Consensus      1396 l~g~~~~~~~-~~lV~ey~~~gsL~~~l~~~~~----------------------------------------------- 1427 (1624)
                      ++++|.+++. .++||||+++|+|.++++....                                               
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            9999987554 8999999999999999986432                                               


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC
Q 047591         1428 ------------------LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1428 ------------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~ 1489 (1624)
                                        .+++..+..|+.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+......
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence                              18899999999999999999996   799999999999999999999999999998764322


Q ss_pred             -CccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1490 -SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1490 -~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                       ........||+.|||||++.+..++.++|||||||++|||+| |+.||......+....             .+.....
T Consensus       248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-------------~~~~~~~  314 (359)
T 3vhe_A          248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-------------RLKEGTR  314 (359)
T ss_dssp             TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH-------------HHHHTCC
T ss_pred             cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHH-------------HHHcCCC
Confidence             223344578999999999988899999999999999999999 9999975432221111             1111100


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      ...       +..++..+.+++.+||+.+|++|||+.|++++|+++...
T Consensus       315 ~~~-------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          315 MRA-------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             CCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCC-------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence            000       012345688899999999999999999999999988764


No 85 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=1.5e-38  Score=375.71  Aligned_cols=259  Identities=23%  Similarity=0.427  Sum_probs=205.6

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc---hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      +.|...+.||+|+||+||+|+.. +++.||+|++...   .....+.|.+|+.++++++||||+++++++.+.+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   90 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM   90 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence            56778899999999999999875 6889999988532   3445678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++|+|.+++...+ .+++.++..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+|+.......
T Consensus        91 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  166 (294)
T 4eqm_A           91 EYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL  166 (294)
T ss_dssp             ECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred             eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence            9999999999997654 58999999999999999999996   7999999999999999999999999999987654333


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                      .......||+.|+|||.+.+..++.++|||||||++|||+||+.||........... ......+...            
T Consensus       167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~-~~~~~~~~~~------------  233 (294)
T 4eqm_A          167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK-HIQDSVPNVT------------  233 (294)
T ss_dssp             --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHH-HHSSCCCCHH------------
T ss_pred             cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HhhccCCCcc------------
Confidence            333445799999999999888999999999999999999999999976432211111 1111111110            


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERM-NVKDALANLKKIK 1614 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-t~~evl~~L~~i~ 1614 (1624)
                          ......++..+.+++.+|++.+|++|| +++++.+.|+++.
T Consensus       234 ----~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          234 ----TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             ----HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             ----hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence                011123456788999999999999999 8999999988753


No 86 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=8.5e-39  Score=375.57  Aligned_cols=258  Identities=24%  Similarity=0.365  Sum_probs=209.5

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      .++|...+.||+|+||+||+|++.++..||||+++... ...++|.+|++++++++||||+++++++.+.+..++||||+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            34677778999999999999999888899999986432 23467899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCccc
Q 047591         1414 PQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQ 1493 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 1493 (1624)
                      ++|+|.+++......+++.++..++.|++.||+|||+   .+|+||||||+||++++++.+||+|||+++..........
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  178 (283)
T 3gen_A          102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS  178 (283)
T ss_dssp             TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred             CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence            9999999998766678999999999999999999996   7999999999999999999999999999987654332333


Q ss_pred             cccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchH
Q 047591         1494 TMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEE 1572 (1624)
Q Consensus      1494 ~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 1572 (1624)
                      ....+|+.|+|||...+..++.++|||||||++|||+| |+.||........ .             +.+........  
T Consensus       179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~-~-------------~~~~~~~~~~~--  242 (283)
T 3gen_A          179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET-A-------------EHIAQGLRLYR--  242 (283)
T ss_dssp             TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-H-------------HHHHTTCCCCC--
T ss_pred             cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH-H-------------HHHhcccCCCC--
Confidence            34567889999999988889999999999999999999 9999875422111 1             11111110000  


Q ss_pred             HHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1573 ADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1573 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                           +..++..+.+++.+||+.+|++|||++|+++.|+++..+
T Consensus       243 -----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          243 -----PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             -----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -----CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence                 012345678899999999999999999999999988654


No 87 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=1.1e-38  Score=388.92  Aligned_cols=270  Identities=16%  Similarity=0.178  Sum_probs=210.4

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEcC------CceEEEEEeccchhh-----------HHHHHHHHHHHHHhcCCCceeE
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFAD------GTNAAIKIFSLQEDR-----------ALKSFDAECEVMRRIRHRNLAK 1395 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~~------~~~vAvK~~~~~~~~-----------~~~~f~~E~~~l~~l~HpNIv~ 1395 (1624)
                      ..++|...+.||+|+||+||+|++..      ++.||||++......           ....+.+|+..++.++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            34678888999999999999998864      478999998643211           1123455666778889999999


Q ss_pred             EEeeeccC----CeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEec--
Q 047591         1396 IVSSCSNP----GFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLD-- 1469 (1624)
Q Consensus      1396 l~g~~~~~----~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld-- 1469 (1624)
                      +++++...    ...++||||+ +|+|.+++......+++.+++.|+.||+.||+|||+   .+|+||||||+|||++  
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~  188 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYK  188 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESS
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecC
Confidence            99998764    4579999999 999999998876789999999999999999999996   7999999999999999  


Q ss_pred             CCCcEEEeeecceeecCCCCCc------cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccc
Q 047591         1470 DDMVAHLGDFGIAKLLDGVDSM------KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE 1543 (1624)
Q Consensus      1470 ~~~~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~ 1543 (1624)
                      .++.+||+|||+|+.+......      ......||+.|||||++.+..++.++|||||||++|||+||+.||.+.....
T Consensus       189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~  268 (364)
T 3op5_A          189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP  268 (364)
T ss_dssp             CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred             CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence            8899999999999876532211      1133459999999999999899999999999999999999999997533222


Q ss_pred             hhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1544 VCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1544 ~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                      . ...+........+.+.++..+..          ..++..+.+++..||+.+|++||+++++++.|+++....
T Consensus       269 ~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~  331 (364)
T 3op5_A          269 K-YVRDSKIRYRENIASLMDKCFPA----------ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI  331 (364)
T ss_dssp             H-HHHHHHHHHHHCHHHHHHHHSCT----------TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             H-HHHHHHHHhhhhHHHHHHHhccc----------ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence            1 11222222222233333332211          134667889999999999999999999999999887654


No 88 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.4e-38  Score=383.71  Aligned_cols=250  Identities=24%  Similarity=0.369  Sum_probs=195.2

Q ss_pred             hCCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      .+.|...+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E   88 (347)
T 3zgw_A            9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE   88 (347)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence            46788889999999999999987 468999999986433 2345678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCc
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      |+++|+|.+++...+ .+++.++..++.||+.||+|||+   .+|+||||||+|||+++++.+||+|||+|+........
T Consensus        89 ~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~  164 (347)
T 3zgw_A           89 YCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY  164 (347)
T ss_dssp             CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred             CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence            999999999997654 58899999999999999999997   79999999999999999999999999999876543333


Q ss_pred             cccccccccccccccccCCCCc-CcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1492 KQTMTLATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~~~~-~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                      ......||+.|+|||++.+..+ +.++||||+||++|||+||+.||++....+. ..            .+..... ...
T Consensus       165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~-~~------------~i~~~~~-~~p  230 (347)
T 3zgw_A          165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMAL-YK------------KIMRGKY-DVP  230 (347)
T ss_dssp             -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH------------HHHHTCC-CCC
T ss_pred             cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HH------------HHHcCCC-CCC
Confidence            3445679999999999887765 8999999999999999999999975321110 11            1111110 000


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                              ..++..+.+++.+|++.||++|||++|+++.
T Consensus       231 --------~~~s~~~~~li~~~L~~dP~~Rps~~eil~h  261 (347)
T 3zgw_A          231 --------KWLSPSSILLLQQMLQVDPKKRISMKNLLNH  261 (347)
T ss_dssp             --------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             --------CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence                    1234557789999999999999999999863


No 89 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=1.9e-38  Score=372.40  Aligned_cols=258  Identities=24%  Similarity=0.369  Sum_probs=198.7

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcC----CceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFAD----GTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKAL 1408 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~----~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~l 1408 (1624)
                      .++|...+.||+|+||+||+|++..    +..||+|++... .....+.|.+|+.++++++||||+++++++. ++..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence            3467778899999999999998743    456999988643 3445678999999999999999999999984 567899


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC
Q 047591         1409 ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      ||||+++|+|.+++...+..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+.....
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS  169 (281)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred             EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence            999999999999998777779999999999999999999996   79999999999999999999999999999877544


Q ss_pred             CCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1489 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      .........+|+.|+|||......++.++|||||||++|||++ |+.||......+.  ...+           ......
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~--~~~i-----------~~~~~~  236 (281)
T 1mp8_A          170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGRI-----------ENGERL  236 (281)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHH-----------HTTCCC
T ss_pred             cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH--HHHH-----------HcCCCC
Confidence            3333344567889999999988889999999999999999997 9999875432211  1111           110000


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      ..        +..++..+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus       237 ~~--------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          237 PM--------PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             CC--------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CC--------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            00        123456788999999999999999999999999998664


No 90 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=2.6e-38  Score=396.33  Aligned_cols=253  Identities=28%  Similarity=0.409  Sum_probs=208.0

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC-eeEEEEE
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG-FKALILQ 1411 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~-~~~lV~e 1411 (1624)
                      ..++|...+.||+|+||+||+|++. ++.||||+++...  ..+.|.+|+++|++++|||||+++++|.+.+ ..++|||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            3456777789999999999999885 7899999987543  4578999999999999999999999987655 7899999


Q ss_pred             ecCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1412 YMPQGSLEKWLYSHNY-LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||++|+|.+++++.+. .+++..++.++.|||+||+|||+   .+|+||||||+|||+++++.+||+|||+|+.....  
T Consensus       268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--  342 (450)
T 1k9a_A          268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--  342 (450)
T ss_dssp             CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence            9999999999986543 47999999999999999999996   79999999999999999999999999999865322  


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                        .....+|+.|||||.+.+..++.++|||||||++|||+| |+.||......+.              ...+...... 
T Consensus       343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--------------~~~i~~~~~~-  405 (450)
T 1k9a_A          343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--------------VPRVEKGYKM-  405 (450)
T ss_dssp             ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH--------------HHHHHTTCCC-
T ss_pred             --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--------------HHHHHcCCCC-
Confidence              122367899999999998999999999999999999999 9999976432211              1111111100 


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                            ..+..|+..+.+++.+||+.+|++|||+.|+++.|+++++.
T Consensus       406 ------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          406 ------DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence                  01124567789999999999999999999999999998765


No 91 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=1.3e-38  Score=382.35  Aligned_cols=256  Identities=25%  Similarity=0.419  Sum_probs=202.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCce----EEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTN----AAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKAL 1408 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~----vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~l 1408 (1624)
                      ++|...+.||+|+||+||+|++. +++.    ||+|.+... .....+.|.+|++++++++||||++++++|.+.+ .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            45777889999999999999874 3443    578877533 2345678999999999999999999999998754 789


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC
Q 047591         1409 ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      ||||+++|+|.++++.....+++..++.|+.||++||+|||+   .+|+||||||+|||++.++.+||+|||+|+.....
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  170 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence            999999999999999877789999999999999999999997   79999999999999999999999999999877543


Q ss_pred             CC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhc
Q 047591         1489 DS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANL 1566 (1624)
Q Consensus      1489 ~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 1566 (1624)
                      .. .......||+.|+|||++.+..++.++|||||||++|||+| |+.||+......  +            .+.+....
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~------------~~~~~~~~  236 (327)
T 3poz_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--I------------SSILEKGE  236 (327)
T ss_dssp             CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--H------------HHHHHTTC
T ss_pred             cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--H------------HHHHHcCC
Confidence            32 22233457889999999999999999999999999999999 999997543221  1            11111111


Q ss_pred             cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 047591         1567 LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKT 1615 (1624)
Q Consensus      1567 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~ 1615 (1624)
                      ....       +..++..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus       237 ~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          237 RLPQ-------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             CCCC-------CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             CCCC-------CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            0000       12345568899999999999999999999999998764


No 92 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=2.8e-38  Score=378.92  Aligned_cols=248  Identities=23%  Similarity=0.329  Sum_probs=203.8

Q ss_pred             hCCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      .++|...+.||+|+||+||+|+. .+|+.||||++...  .....+++.+|++++++++||||+++++++.+.+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            45788889999999999999987 57899999998643  3345678899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++|+|.+++...+ .+++.++..++.|+++||+|||+   .+|+||||||+|||++.++.+||+|||+|+...... 
T Consensus        94 e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-  168 (328)
T 3fe3_A           94 EYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-  168 (328)
T ss_dssp             CCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred             ECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence            9999999999997653 47889999999999999999996   799999999999999999999999999998765332 


Q ss_pred             ccccccccccccccccccCCCCcC-cccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVS-TSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~-~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                       ......||+.|+|||++.+..++ .++||||+||++|||+||+.||++....+  +..           .+..... ..
T Consensus       169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~-----------~i~~~~~-~~  233 (328)
T 3fe3_A          169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE--LRE-----------RVLRGKY-RI  233 (328)
T ss_dssp             -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH-----------HHHHCCC-CC
T ss_pred             -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH--HHH-----------HHHhCCC-CC
Confidence             23446799999999998777764 89999999999999999999997532111  000           1111100 00


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .        ..++..+.+++.+|++.||++|||++|+++.
T Consensus       234 p--------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          234 P--------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             C--------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             C--------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            0        1234557789999999999999999999863


No 93 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=7.1e-38  Score=373.15  Aligned_cols=269  Identities=22%  Similarity=0.276  Sum_probs=205.2

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      ++|...+.||+|+||+||+|+..+|+.||||++....  ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  100 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF  100 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence            5677889999999999999999889999999986432  23457889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcc
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~ 1492 (1624)
                      ++ |+|.+++......+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+...... ..
T Consensus       101 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~  175 (311)
T 3niz_A          101 ME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-RS  175 (311)
T ss_dssp             CS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-C-
T ss_pred             CC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCc-cc
Confidence            98 58999988777778999999999999999999996   799999999999999999999999999998765322 22


Q ss_pred             ccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhh---hcCChhHHHH------H
Q 047591         1493 QTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE---ESLPDAVTDV------I 1562 (1624)
Q Consensus      1493 ~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~---~~~~~~~~~~------~ 1562 (1624)
                      .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||......+. +.....   ...+..+...      .
T Consensus       176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~  254 (311)
T 3niz_A          176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSILGTPNPREWPQVQELPLWK  254 (311)
T ss_dssp             --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHHHCCCCTTTSGGGTTSHHHH
T ss_pred             ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHHCCCChHHhhhhhccchhh
Confidence            334578999999998765 5689999999999999999999999976433222 111111   1111110000      0


Q ss_pred             hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1563 DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1563 d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      +.................+..++.+++.+|++.||++|||++|+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             SCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             hcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            00000000000011112345678899999999999999999999863


No 94 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.4e-38  Score=377.39  Aligned_cols=252  Identities=20%  Similarity=0.294  Sum_probs=208.0

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      .+.|...+.||+|+||+||+|+.. +++.+|+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            356788899999999999999875 57889999986443 3456789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC--CCcEEEeeecceeecCCCCC
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD--DMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~--~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      +++|+|.+++......+++.++..++.|++.||+|||+   .+|+||||||+|||++.  ++.+||+|||+++...... 
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~-  158 (321)
T 1tki_A           83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-  158 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence            99999999998766678999999999999999999996   79999999999999997  7899999999999875432 


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                       ......||+.|+|||+..+..++.++|||||||++|||+||+.||......+ ....            +....... .
T Consensus       159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~------------i~~~~~~~-~  223 (321)
T 1tki_A          159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-IIEN------------IMNAEYTF-D  223 (321)
T ss_dssp             -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHH------------HHHTCCCC-C
T ss_pred             -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH-HHHH------------HHcCCCCC-C
Confidence             2334579999999999988889999999999999999999999997532211 1111            11111100 0


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                          ......++..+.+++.+|++.||++|||+.|+++.
T Consensus       224 ----~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          224 ----EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             ----HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ----hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence                11123456678899999999999999999999873


No 95 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=1.2e-38  Score=404.03  Aligned_cols=255  Identities=22%  Similarity=0.393  Sum_probs=211.9

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcC-CceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~-~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      .++|...+.||+|+||+||+|++.. +..||||+++... ...+.|.+|+++|++++|||||+++++|.+.+..++||||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~  297 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF  297 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence            3456777899999999999999874 7889999986433 3457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCc
Q 047591         1413 MPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      |++|+|.++++.. ...+++..++.|+.|||+||+|||+   .+|+||||||+|||+++++.+||+|||+|+........
T Consensus       298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  374 (495)
T 1opk_A          298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT  374 (495)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred             cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence            9999999999864 3568999999999999999999996   79999999999999999999999999999987544333


Q ss_pred             cccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                      ......+|+.|+|||++....++.++|||||||++|||+| |+.||......+.              .+.+....... 
T Consensus       375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~--------------~~~~~~~~~~~-  439 (495)
T 1opk_A          375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--------------YELLEKDYRME-  439 (495)
T ss_dssp             CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--------------HHHHHTTCCCC-
T ss_pred             ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH--------------HHHHHcCCCCC-
Confidence            3334557889999999988899999999999999999999 9999875432211              11111111100 


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKI 1613 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i 1613 (1624)
                            .+..++..+.+++.+||+.+|++||||.|+++.|+.+
T Consensus       440 ------~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          440 ------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             ------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             ------CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence                  0124566788999999999999999999999999876


No 96 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-38  Score=385.20  Aligned_cols=265  Identities=24%  Similarity=0.380  Sum_probs=212.3

Q ss_pred             HHHhCCCCcCCeEeecCceEEEEEEEc------CCceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccC
Q 047591         1331 RLATNGFSESNLLGTGIFSSVYKATFA------DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNP 1403 (1624)
Q Consensus      1331 ~~at~~f~~~~~lG~G~~G~Vyk~~~~------~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~ 1403 (1624)
                      ....++|...+.||+|+||+||+|+..      +++.||||+++.. .....+.|.+|++++++++||||++++++|.+.
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  122 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG  122 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence            344567888899999999999999874      3478999998754 334567899999999999999999999999999


Q ss_pred             CeeEEEEEecCCCCHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcC
Q 047591         1404 GFKALILQYMPQGSLEKWLYSHN-----------------------YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460 (1624)
Q Consensus      1404 ~~~~lV~ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrD 1460 (1624)
                      +..++||||+++|+|.+++....                       ..+++.+++.|+.||++||+|||+   .+|+|||
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~D  199 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRD  199 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred             CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCC
Confidence            99999999999999999998642                       468999999999999999999996   7999999


Q ss_pred             CCCCcEEecCCCcEEEeeecceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCC
Q 047591         1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDD 1538 (1624)
Q Consensus      1461 lK~~NILld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~ 1538 (1624)
                      |||+|||+++++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||.+
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  279 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  279 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence            999999999999999999999987643221 12234568999999999888889999999999999999999 9999875


Q ss_pred             CCccchhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1539 MFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1539 ~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      ....+.  ..           .+.+......        +..++..+.+++.+||+.+|++|||+.|+++.|+++..+..
T Consensus       280 ~~~~~~--~~-----------~~~~~~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~  338 (343)
T 1luf_A          280 MAHEEV--IY-----------YVRDGNILAC--------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE  338 (343)
T ss_dssp             SCHHHH--HH-----------HHHTTCCCCC--------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred             CChHHH--HH-----------HHhCCCcCCC--------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence            422111  11           1111111110        12345678899999999999999999999999999876654


Q ss_pred             h
Q 047591         1619 K 1619 (1624)
Q Consensus      1619 ~ 1619 (1624)
                      .
T Consensus       339 ~  339 (343)
T 1luf_A          339 G  339 (343)
T ss_dssp             -
T ss_pred             h
Confidence            4


No 97 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.4e-38  Score=388.06  Aligned_cols=258  Identities=24%  Similarity=0.394  Sum_probs=207.9

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc------CCceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA------DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~------~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      ++|...+.||+|+||+||+|++.      +++.||||+++.. ......+|.+|+.++++++|||||++++++.+.+..+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            45677789999999999999863      3567999998643 3445568999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCC---cEEEee
Q 047591         1408 LILQYMPQGSLEKWLYSHN------YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDM---VAHLGD 1478 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~---~~kl~D 1478 (1624)
                      +||||+++|+|.+++...+      ..+++.+++.|+.||++||+|||+   .+|+||||||+|||++.++   .+||+|
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEECC
Confidence            9999999999999998643      458999999999999999999996   7999999999999999554   599999


Q ss_pred             ecceeecCCCC-CccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCCh
Q 047591         1479 FGIAKLLDGVD-SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPD 1556 (1624)
Q Consensus      1479 FGla~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~ 1556 (1624)
                      ||+|+...... ........||+.|||||++.+..++.++|||||||++|||+| |+.||......+  +.         
T Consensus       228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~--~~---------  296 (367)
T 3l9p_A          228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VL---------  296 (367)
T ss_dssp             CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HH---------
T ss_pred             CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HH---------
Confidence            99998653222 222334568999999999988899999999999999999998 999986532211  11         


Q ss_pred             hHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1557 AVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1557 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                         +.+........       +..++..+.+++.+||+.+|++|||+.|+++.|+.+...
T Consensus       297 ---~~i~~~~~~~~-------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          297 ---EFVTSGGRMDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             ---HHHHTTCCCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ---HHHHcCCCCCC-------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence               11111100000       123456688999999999999999999999999988653


No 98 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=8.8e-38  Score=369.64  Aligned_cols=265  Identities=13%  Similarity=0.125  Sum_probs=213.4

Q ss_pred             hCCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccchhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeEEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      .++|...+.||+|+||+||+|+. .+++.||||++....  ..+.+.+|+++++++ +|+|++++++++.+....++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            35688889999999999999986 468999999886432  235688899999999 89999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc-----EEEeeecceeecC
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV-----AHLGDFGIAKLLD 1486 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~-----~kl~DFGla~~~~ 1486 (1624)
                      |+ +|+|.+++...+..+++.++..|+.||+.||+|||+   .+|+||||||+||+++.++.     +||+|||+|+...
T Consensus        87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~  162 (298)
T 1csn_A           87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  162 (298)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence            99 999999998777779999999999999999999995   79999999999999988776     9999999999875


Q ss_pred             CCCCc------cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHH
Q 047591         1487 GVDSM------KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTD 1560 (1624)
Q Consensus      1487 ~~~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~ 1560 (1624)
                      .....      ......||+.|+|||+..+..++.++|||||||++|||+||+.||......... ..         ...
T Consensus       163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~~---------~~~  232 (298)
T 1csn_A          163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK-QK---------YER  232 (298)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH-HH---------HHH
T ss_pred             cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH-HH---------HHH
Confidence            43221      223457999999999999889999999999999999999999999764321110 00         000


Q ss_pred             HHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1561 VIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1561 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      +.........    ......++..+.+++.+||+.+|++|||++++++.|+++..+..
T Consensus       233 ~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~  286 (298)
T 1csn_A          233 IGEKKQSTPL----RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN  286 (298)
T ss_dssp             HHHHHHHSCH----HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHhhccCccH----HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence            0000000000    00112456778999999999999999999999999999987644


No 99 
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00  E-value=5.4e-38  Score=393.32  Aligned_cols=369  Identities=18%  Similarity=0.195  Sum_probs=304.3

Q ss_pred             cCCcccccCCccccCCCcccccccccccccccccCcccccccccceeccCCcCCCCCCCcccccCccchheeccccccCC
Q 047591          170 SSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGS  249 (1624)
Q Consensus       170 s~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~  249 (1624)
                      ......+..+.+++++++|++|+|++|.+++ +| .++.+++|++|+|++|++++ +|  ++++++|++|+|++|++++ 
T Consensus        26 ~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-   99 (457)
T 3bz5_A           26 AAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-   99 (457)
T ss_dssp             HHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-
T ss_pred             HhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-
Confidence            3445566667789999999999999999996 46 69999999999999999997 44  8899999999999999986 


Q ss_pred             CCccccccCCCCcEeecccccccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCC
Q 047591          250 LPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSG  329 (1624)
Q Consensus       250 ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g  329 (1624)
                      +|   ++.+++|++|++++|++++ +|  ++.+++|++|++++|+++.+         |  +.++++|++|++++|+..|
T Consensus       100 ~~---~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---------~--l~~l~~L~~L~l~~n~~~~  162 (457)
T 3bz5_A          100 LD---VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---------D--VSHNTQLTELDCHLNKKIT  162 (457)
T ss_dssp             CC---CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---------C--CTTCTTCCEEECTTCSCCC
T ss_pred             ee---cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---------c--cccCCcCCEEECCCCCccc
Confidence            45   5789999999999999998 44  89999999999998876643         2  6678899999999998777


Q ss_pred             CCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEccccccccCCCCCCc
Q 047591          330 NLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQ  409 (1624)
Q Consensus       330 ~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~  409 (1624)
                      .++  + ..+++|++|++++|++++ +|  ++.+++|+.|++++|++++.   .|+.+++|++|+|++|+++..+     
T Consensus       163 ~~~--~-~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip-----  228 (457)
T 3bz5_A          163 KLD--V-TPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEID-----  228 (457)
T ss_dssp             CCC--C-TTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCC-----
T ss_pred             ccc--c-ccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccC-----
Confidence            774  2 368999999999999997 45  88899999999999999987   3889999999999999987521     


Q ss_pred             ccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEeccCCccCCCccchhc
Q 047591          410 SFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVG  489 (1624)
Q Consensus       410 ~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~iP~~~~  489 (1624)
                           +..+++|++|++++|++++..+..   +. .|+.|+++.|              +|+.|++++|++.|.+|  ++
T Consensus       229 -----~~~l~~L~~L~l~~N~l~~~~~~~---l~-~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~  283 (457)
T 3bz5_A          229 -----VTPLTQLTYFDCSVNPLTELDVST---LS-KLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AE  283 (457)
T ss_dssp             -----CTTCTTCSEEECCSSCCSCCCCTT---CT-TCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CT
T ss_pred             -----ccccCCCCEEEeeCCcCCCcCHHH---CC-CCCEEeccCC--------------CCCEEECCCCccCCccc--cc
Confidence                 556788888888888888764333   22 4556666554              46778888888888887  46


Q ss_pred             cccccceecccccccccCCCccccCCCCCceeecccccccCCCccccccccCCccccccCccccccCchhhcccccccee
Q 047591          490 KLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLNSTIPSTFWSLEYILVV  569 (1624)
Q Consensus       490 ~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~l  569 (1624)
                      .+++|+.|+|++|.+.|.+|.   ...+|+.|++++|             ++|+.|+|++|+|+|. |  ++.+++|+.|
T Consensus       284 ~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L  344 (457)
T 3bz5_A          284 GCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSL  344 (457)
T ss_dssp             TCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEE
T ss_pred             ccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEE
Confidence            788899999999988888884   4456777766655             6899999999999984 4  8999999999


Q ss_pred             ecccccccCCCCcccccccccceeeccCCcCCCCccccccCCccccccccccCCCCCCCchhh
Q 047591          570 DFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAI  632 (1624)
Q Consensus       570 dLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~iP~~~  632 (1624)
                      |+++|+|+|        ++.|+.|++++|+++|.     +++..|..+++++|+|+|.||..+
T Consensus       345 ~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~  394 (457)
T 3bz5_A          345 SCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDL  394 (457)
T ss_dssp             ECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred             ECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhH
Confidence            999999986        35688889999999986     466788999999999999999864


No 100
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=4.6e-38  Score=378.12  Aligned_cols=262  Identities=16%  Similarity=0.166  Sum_probs=210.6

Q ss_pred             CCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccchhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeEEEEEe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      ++|...+.||+|+||+||+|+. .+++.||||++.....  .+.+.+|+++++++ +||||+++++++...+..++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            5688889999999999999986 4688999999864322  34688999999999 999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc-----EEEeeecceeecCC
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV-----AHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~-----~kl~DFGla~~~~~ 1487 (1624)
                      + +|+|.+++...+..+++.+++.|+.|++.||+|||+   .+|+||||||+|||++.++.     +||+|||+|+....
T Consensus        87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~  162 (330)
T 2izr_A           87 L-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID  162 (330)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred             C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence            9 999999998766679999999999999999999996   79999999999999999887     99999999997654


Q ss_pred             CCCc------cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHH
Q 047591         1488 VDSM------KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDV 1561 (1624)
Q Consensus      1488 ~~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~ 1561 (1624)
                      ....      ......||+.|+|||++.+..++.++|||||||++|||+||+.||.........  ..        ...+
T Consensus       163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~--~~--------~~~i  232 (330)
T 2izr_A          163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK--ER--------YQKI  232 (330)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHH--HH--------HHHH
T ss_pred             CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHH--HH--------HHHH
Confidence            3221      123467999999999999999999999999999999999999999764322110  00        0001


Q ss_pred             HhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1562 IDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1562 ~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                      .+.......    ......++ .+.+++.+||+.+|++||+++++.+.|+++..+.
T Consensus       233 ~~~~~~~~~----~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          233 GDTKRATPI----EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             HHHHHHSCH----HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HhhhccCCH----HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            000000000    00011234 7899999999999999999999999999887654


No 101
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=4.3e-38  Score=375.08  Aligned_cols=244  Identities=23%  Similarity=0.266  Sum_probs=195.9

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++...  .......+.+|+..+.++ +||||++++++|.+.+..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            46888889999999999999886 6899999987542  233445566666666665 9999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+ +|+|.+++...+..++|..+..|+.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+...... 
T Consensus       137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~-  211 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG-  211 (311)
T ss_dssp             ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred             ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence            999 779999998777789999999999999999999997   789999999999999999999999999998765322 


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                       ......||++|+|||++.+ .++.++|||||||++|||++|..|+...    .....+.....+.              
T Consensus       212 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~~~~~~--------------  271 (311)
T 3p1a_A          212 -AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQGYLPP--------------  271 (311)
T ss_dssp             ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTTTCCCH--------------
T ss_pred             -CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhccCCCc--------------
Confidence             2334569999999998765 7899999999999999999997775431    1111111111111              


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                           .....++..+.+++.+|++.+|++|||++|+++
T Consensus       272 -----~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          272 -----EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             -----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                 111234567889999999999999999999986


No 102
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=6.8e-39  Score=401.82  Aligned_cols=257  Identities=28%  Similarity=0.450  Sum_probs=204.3

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      .++|...+.||+|+||+||+|++.++..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++|||||
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~  260 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM  260 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence            34567778999999999999999888889999987433 235689999999999999999999999876 6789999999


Q ss_pred             CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcc
Q 047591         1414 PQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492 (1624)
Q Consensus      1414 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~ 1492 (1624)
                      ++|+|.++++.. +..+++.++++++.|||.||+|||+   .+|+||||||+|||+++++.+||+|||+|+.........
T Consensus       261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  337 (452)
T 1fmk_A          261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  337 (452)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence            999999999753 3568999999999999999999996   799999999999999999999999999998765433333


Q ss_pred             ccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCch
Q 047591         1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEE 1571 (1624)
Q Consensus      1493 ~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 1571 (1624)
                      .....+|+.|+|||.+..+.++.++|||||||++|||+| |+.||.+....+.              .+.+.......  
T Consensus       338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--------------~~~i~~~~~~~--  401 (452)
T 1fmk_A          338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP--  401 (452)
T ss_dssp             -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--------------HHHHHTTCCCC--
T ss_pred             ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHH--------------HHHHHcCCCCC--
Confidence            334567889999999988899999999999999999999 9999875432111              11111111000  


Q ss_pred             HHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1572 EADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1572 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                           .+..++..+.+++.+||+.+|++|||++++++.|+++.+.
T Consensus       402 -----~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          402 -----CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             -----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             -----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence                 0124566788999999999999999999999999987543


No 103
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=4.2e-38  Score=398.31  Aligned_cols=198  Identities=23%  Similarity=0.328  Sum_probs=171.5

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHH---HHHHHHHhcCCCceeeeeeeeccCCeEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKA  816 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~---~E~~~l~~l~H~niv~l~~~~~~~~~~~  816 (1624)
                      ++|...++||+|+||+||+|+.. +|+.||||++....   ......+.   +|+.+++.++|||||++++++.+.+..|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            67999999999999999999864 69999999997432   12222333   4466777889999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCC
Q 047591          817 LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG  896 (1624)
Q Consensus       817 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~  896 (1624)
                      +|||||+||+|.++|...+ .+++..+..|+.||+.||+|||+.   +||||||||+|||+|++|++||+|||+|+.+..
T Consensus       269 lVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~  344 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK  344 (689)
T ss_dssp             EEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence            9999999999999998654 689999999999999999999984   599999999999999999999999999998754


Q ss_pred             CCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          897 EDSVTQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       897 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ..   ....+||+.|||||++.. ..|+.++||||+||++|||+||+.||...
T Consensus       345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~  394 (689)
T 3v5w_A          345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH  394 (689)
T ss_dssp             CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred             CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            33   234579999999999865 57899999999999999999999999653


No 104
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3e-38  Score=367.28  Aligned_cols=257  Identities=25%  Similarity=0.386  Sum_probs=211.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEecC
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMP 1414 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~~ 1414 (1624)
                      ++|...+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            45677789999999999999998888999999874432 34679999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcccc
Q 047591         1415 QGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT 1494 (1624)
Q Consensus      1415 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 1494 (1624)
                      +|+|.+++......+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++...........
T Consensus        87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  163 (267)
T 3t9t_A           87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  163 (267)
T ss_dssp             TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence            999999998876778999999999999999999996   79999999999999999999999999999876433222233


Q ss_pred             ccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHH
Q 047591         1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEA 1573 (1624)
Q Consensus      1495 ~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 1573 (1624)
                      ...||+.|+|||......++.++|||||||++|||+| |+.||......+.  ..            .+........   
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~------------~i~~~~~~~~---  226 (267)
T 3t9t_A          164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--VE------------DISTGFRLYK---  226 (267)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HH------------HHHTTCCCCC---
T ss_pred             cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH--HH------------HHhcCCcCCC---
Confidence            4567889999999988889999999999999999999 8999865321110  00            0110000000   


Q ss_pred             HHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1574 DIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1574 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                          +..++..+.+++.+||+.+|++|||++|+++.|+++..+
T Consensus       227 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          227 ----PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             ----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ----CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence                012345678899999999999999999999999998753


No 105
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.3e-38  Score=384.73  Aligned_cols=259  Identities=26%  Similarity=0.449  Sum_probs=211.3

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc--------CCceEEEEEeccc-hhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccC
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA--------DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNP 1403 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~--------~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~ 1403 (1624)
                      .++|...+.||+|+||+||+|+..        .+..||||+++.. .....+++.+|+++++++ +|||||+++++|.++
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            346777789999999999999863        2356999998644 344567899999999999 999999999999999


Q ss_pred             CeeEEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe
Q 047591         1404 GFKALILQYMPQGSLEKWLYSHN---------------YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL 1468 (1624)
Q Consensus      1404 ~~~~lV~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl 1468 (1624)
                      +..++||||+++|+|.+++....               ..+++.++++|+.||+.||+|||+   .+|+||||||+|||+
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll  224 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV  224 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEE
T ss_pred             CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEEE
Confidence            99999999999999999998653               358999999999999999999996   799999999999999


Q ss_pred             cCCCcEEEeeecceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhh
Q 047591         1469 DDDMVAHLGDFGIAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCL 1546 (1624)
Q Consensus      1469 d~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l 1546 (1624)
                      ++++.+||+|||+|+....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||......+  +
T Consensus       225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~--~  302 (382)
T 3tt0_A          225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--L  302 (382)
T ss_dssp             CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--H
T ss_pred             cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--H
Confidence            9999999999999987654332 22334567899999999988999999999999999999999 999986532111  1


Q ss_pred             hhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1547 KHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1547 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                                  .+.+........       +..++..+.+++.+||+.+|++|||++|+++.|+++...
T Consensus       303 ------------~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          303 ------------FKLLKEGHRMDK-------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             ------------HHHHHTTCCCCC-------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ------------HHHHHcCCCCCC-------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence                        111111110000       113456788999999999999999999999999998764


No 106
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.9e-38  Score=385.59  Aligned_cols=200  Identities=26%  Similarity=0.344  Sum_probs=170.7

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeecc------CC
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSN------HG  813 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~  813 (1624)
                      .++|...+.||+|+||+||+|+. .+|+.||||+++...  ....+.+.+|+++|++++|||||++++++..      .+
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            46788999999999999999986 479999999996543  2345678999999999999999999998753      36


Q ss_pred             eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeec
Q 047591          814 FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKL  893 (1624)
Q Consensus       814 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~  893 (1624)
                      ..|+|||||+ |+|.+++... ..+++.++..|+.||+.||+|||+.   +||||||||+|||++.++.+||+|||+|+.
T Consensus       133 ~~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~  207 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARG  207 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             EEEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeee
Confidence            7899999996 7899999764 4799999999999999999999994   599999999999999999999999999987


Q ss_pred             cCCCC---CcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          894 LDGED---SVTQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       894 ~~~~~---~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      +....   .......+||+.|||||++.+ ..++.++||||+|||+|||+||+.||..
T Consensus       208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g  265 (398)
T 4b99_A          208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG  265 (398)
T ss_dssp             C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence            64322   122334689999999998765 4579999999999999999999999864


No 107
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=5.1e-38  Score=379.49  Aligned_cols=202  Identities=23%  Similarity=0.337  Sum_probs=171.7

Q ss_pred             HHHHhhcCCCCCcceeecCCccceEEEEec----CCCEEEEEEeecccchhHHHHHHHHHHHHhc-CCCceeeeeeeecc
Q 047591          737 QELQRLTDGFSESNLIGAGSFGSVYKATLP----YGMNVAIKVFNLQLDGAIKSFDAECEVLRRV-RHRNLVKIISSCSN  811 (1624)
Q Consensus       737 ~el~~~t~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~  811 (1624)
                      +.+-+..+.|+..+.||+|+||+||+|+.+    +++.||||++....  ...++.+|+++|+++ +|||||++++++.+
T Consensus        14 ~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~   91 (361)
T 4f9c_A           14 EAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRK   91 (361)
T ss_dssp             HHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred             HhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence            334456788999999999999999999753    46889999986443  345688999999998 69999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCC-CceEEEeeee
Q 047591          812 HGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDD-TVAHLSDFGI  890 (1624)
Q Consensus       812 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~-~~~kl~DFGl  890 (1624)
                      ++..|+|||||++|+|.+++.    .+++.++..|+.|++.||+|||+.   +||||||||+|||++.+ +.+||+|||+
T Consensus        92 ~~~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGl  164 (361)
T 4f9c_A           92 NDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGL  164 (361)
T ss_dssp             TTEEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             CCEEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence            999999999999999999984    488999999999999999999994   59999999999999877 7999999999


Q ss_pred             eeccCCCCCc---------------------------ccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHcCC
Q 047591          891 SKLLDGEDSV---------------------------TQTMTLATFGYMAPEYGSEG-IVSTCGDVYSFGILMIETFTRK  942 (1624)
Q Consensus       891 a~~~~~~~~~---------------------------~~~~~~gt~~Y~aPE~~~~~-~~~~k~DvwS~Gvil~elltg~  942 (1624)
                      |+........                           ..+..+||+.|||||++.+. .++.++||||+|||+|||+||+
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~  244 (361)
T 4f9c_A          165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR  244 (361)
T ss_dssp             CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence            9865432210                           11234799999999988664 5899999999999999999999


Q ss_pred             CCCCc
Q 047591          943 MPTDE  947 (1624)
Q Consensus       943 ~P~~~  947 (1624)
                      .||..
T Consensus       245 ~Pf~~  249 (361)
T 4f9c_A          245 YPFYK  249 (361)
T ss_dssp             SSSSC
T ss_pred             CCCCC
Confidence            99854


No 108
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.1e-38  Score=390.51  Aligned_cols=263  Identities=21%  Similarity=0.300  Sum_probs=210.9

Q ss_pred             cCHHHHHHHhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeee
Q 047591         1325 ISYQELRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSC 1400 (1624)
Q Consensus      1325 ~~~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~ 1400 (1624)
                      +.+.+.+...++|...++||+|+||+||+|+.. +|+.||||+++...   ....+.+.+|.+++.+++||||+++++++
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            345566677889999999999999999999885 68999999986432   22345688999999999999999999999


Q ss_pred             ccCCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeec
Q 047591         1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFG 1480 (1624)
Q Consensus      1401 ~~~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFG 1480 (1624)
                      .+++..++|||||++|+|.+++.+.+..+++..+..++.||+.||+|||+   .+||||||||+|||+|.++++||+|||
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFG  207 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFG  207 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeech
Confidence            99999999999999999999998766678999999999999999999996   799999999999999999999999999


Q ss_pred             ceeecCCCCCccccccccccccccccccC-------CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhc
Q 047591         1481 IAKLLDGVDSMKQTMTLATIGYMAPEYGS-------EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEES 1553 (1624)
Q Consensus      1481 la~~~~~~~~~~~~~~~gt~~y~APE~~~-------~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~ 1553 (1624)
                      +|+.............+||+.|||||++.       ...++.++|||||||++|||+||+.||......+. ....+.. 
T Consensus       208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~~~i~~~-  285 (412)
T 2vd5_A          208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET-YGKIVHY-  285 (412)
T ss_dssp             TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTH-
T ss_pred             hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH-HHHHHhc-
Confidence            99987654433344568999999999876       46789999999999999999999999975322111 1111100 


Q ss_pred             CChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCC---CCHHHHHH
Q 047591         1554 LPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEER---MNVKDALA 1608 (1624)
Q Consensus      1554 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R---Pt~~evl~ 1608 (1624)
                               ...+.- .     .....++..+.+++.+|+. +|++|   |+++|+.+
T Consensus       286 ---------~~~~~~-p-----~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          286 ---------KEHLSL-P-----LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             ---------HHHCCC-C---------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             ---------ccCcCC-C-----ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence                     000000 0     0012345678899999999 99998   58888865


No 109
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=4.7e-38  Score=374.00  Aligned_cols=255  Identities=26%  Similarity=0.403  Sum_probs=199.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEecC
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMP 1414 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~~ 1414 (1624)
                      ++|...+.||+|+||+||+|++. ++.||||++...  ...+.|.+|++++++++||||+++++++.+  ..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence            35667789999999999999884 788999998633  345789999999999999999999999874  4789999999


Q ss_pred             CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc-EEEeeecceeecCCCCCc
Q 047591         1415 QGSLEKWLYSHNY--LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV-AHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1415 ~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~-~kl~DFGla~~~~~~~~~ 1491 (1624)
                      +|+|.++++....  .+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++.....   
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---  159 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---  159 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence            9999999986542  4788999999999999999999754479999999999999998886 799999999765422   


Q ss_pred             cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCch
Q 047591         1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEE 1571 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 1571 (1624)
                       .....||+.|+|||+..+..++.++|||||||++|||+||+.||+.......... |.           +........ 
T Consensus       160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-~~-----------~~~~~~~~~-  225 (307)
T 2eva_A          160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM-WA-----------VHNGTRPPL-  225 (307)
T ss_dssp             ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH-HH-----------HHTTCCCCC-
T ss_pred             -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH-HH-----------HhcCCCCCc-
Confidence             2234699999999999988999999999999999999999999975422211111 10           000000000 


Q ss_pred             HHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1572 EADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1572 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                            ...++..+.+++.+||+.+|++|||++|+++.|+++...+
T Consensus       226 ------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          226 ------IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             ------BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred             ------ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence                  0124456788999999999999999999999999886543


No 110
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=9.8e-38  Score=378.39  Aligned_cols=251  Identities=22%  Similarity=0.318  Sum_probs=203.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchh-----hHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQED-----RALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKAL 1408 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~-----~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~l 1408 (1624)
                      +.|...+.||+|+||+||+|+.. +++.||||++.....     ...+.+.+|++++++++|||||++++++.+++..++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            35777889999999999999875 689999999864321     135789999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc---EEEeeecce
Q 047591         1409 ILQYMPQGSLEKWLYSH---NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV---AHLGDFGIA 1482 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~---~kl~DFGla 1482 (1624)
                      |||||++|+|.+++.+.   +..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.   +||+|||+|
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            99999999999888643   3458999999999999999999996   79999999999999987654   999999999


Q ss_pred             eecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHH
Q 047591         1483 KLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVI 1562 (1624)
Q Consensus      1483 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1562 (1624)
                      +...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||....  .....            .+.
T Consensus       181 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~------------~i~  245 (351)
T 3c0i_A          181 IQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFE------------GII  245 (351)
T ss_dssp             EECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHH------------HHH
T ss_pred             eEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHH------------HHH
Confidence            8875432 22334579999999999998899999999999999999999999997531  11111            111


Q ss_pred             hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1563 DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1563 d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      ......     ....+..++..+.+++.+|++.||++|||+.|+++
T Consensus       246 ~~~~~~-----~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          246 KGKYKM-----NPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HTCCCC-----CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCCCCC-----CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            111100     01112334567889999999999999999999986


No 111
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=8.7e-38  Score=366.63  Aligned_cols=258  Identities=21%  Similarity=0.375  Sum_probs=206.1

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcC----CceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFAD----GTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKAL 1408 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~----~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~l 1408 (1624)
                      .++|...+.||+|+||+||+|++..    +..||||++... .....+.|.+|++++++++||||+++++++.+ +..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence            4567778999999999999998753    235999998654 33456789999999999999999999999865 45689


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC
Q 047591         1409 ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      ||||+++|+|.+++...+..+++..+..++.|+++||+|||+   .+|+||||||+||+++.++.+||+|||+++.....
T Consensus        90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  166 (281)
T 3cc6_A           90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE  166 (281)
T ss_dssp             EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred             EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence            999999999999998777778999999999999999999996   79999999999999999999999999999876544


Q ss_pred             CCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1489 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      .........+|+.|+|||...+..++.++|||||||++|||+| |+.||........  ..            .+.....
T Consensus       167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~--~~------------~~~~~~~  232 (281)
T 3cc6_A          167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV--IG------------VLEKGDR  232 (281)
T ss_dssp             ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH--HH------------HHHHTCC
T ss_pred             cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH--HH------------HHhcCCC
Confidence            3333344567889999999988889999999999999999999 9999865322211  11            1110000


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      ...       +..++..+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus       233 ~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  274 (281)
T 3cc6_A          233 LPK-------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM  274 (281)
T ss_dssp             CCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCC-------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence            000       012345688899999999999999999999999998765


No 112
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1.1e-37  Score=378.24  Aligned_cols=251  Identities=22%  Similarity=0.285  Sum_probs=204.9

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchh------hHHHHHHHHHHHHHhcCCCceeEEEeeeccCCee
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQED------RALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFK 1406 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~------~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~ 1406 (1624)
                      .+.|...+.||+|+||+||+|+.. +|+.||||+++....      ...+.+.+|++++++++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            356778899999999999999875 588999999864332      1357899999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCC----cEEEeeecce
Q 047591         1407 ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDM----VAHLGDFGIA 1482 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~----~~kl~DFGla 1482 (1624)
                      ++||||+++|+|.+++... ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++    .+||+|||+|
T Consensus        91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence            9999999999999999754 468999999999999999999996   7999999999999998877    7999999999


Q ss_pred             eecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHH
Q 047591         1483 KLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVI 1562 (1624)
Q Consensus      1483 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1562 (1624)
                      +......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+ .+.......         
T Consensus       167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~-~~~~i~~~~---------  234 (361)
T 2yab_A          167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANITAVS---------  234 (361)
T ss_dssp             EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTC---------
T ss_pred             eEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhcC---------
Confidence            9875432  2334579999999999988899999999999999999999999997532111 111111100         


Q ss_pred             hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1563 DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1563 d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                          ...    ....+..++..+.+++.+|+..||++|||+.|+++
T Consensus       235 ----~~~----~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          235 ----YDF----DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             ----CCC----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ----CCC----CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                000    01112334567889999999999999999999985


No 113
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=1.9e-38  Score=373.68  Aligned_cols=254  Identities=21%  Similarity=0.348  Sum_probs=203.9

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcC-C-------ceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCee
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFAD-G-------TNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFK 1406 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~-~-------~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~ 1406 (1624)
                      ++|...+.||+|+||+||+|+... +       ..||+|++........+.|.+|++++++++||||+++++++.+++..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            456777899999999999998753 3       46999999766666678899999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc--------EEEee
Q 047591         1407 ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV--------AHLGD 1478 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~--------~kl~D 1478 (1624)
                      ++||||+++|+|.+++...+..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.        +||+|
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D  164 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD  164 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred             EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeeecc
Confidence            99999999999999998877678999999999999999999996   78999999999999998887        99999


Q ss_pred             ecceeecCCCCCccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChh
Q 047591         1479 FGIAKLLDGVDSMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDA 1557 (1624)
Q Consensus      1479 FGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~ 1557 (1624)
                      ||+++....     .....||+.|+|||.+.+ ..++.++|||||||++|||+||..|+............+ .      
T Consensus       165 fg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~-~------  232 (289)
T 4fvq_A          165 PGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY-E------  232 (289)
T ss_dssp             CCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-H------
T ss_pred             CcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh-h------
Confidence            999875432     223468999999998876 779999999999999999999665543322111111100 0      


Q ss_pred             HHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1558 VTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1558 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                           +.....          ..++..+.+++.+||+.||++|||++|+++.|+++.+...
T Consensus       233 -----~~~~~~----------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~  278 (289)
T 4fvq_A          233 -----DRHQLP----------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL  278 (289)
T ss_dssp             -----TTCCCC----------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred             -----ccCCCC----------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence                 000000          0112346789999999999999999999999998866544


No 114
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.7e-37  Score=373.24  Aligned_cols=248  Identities=22%  Similarity=0.288  Sum_probs=203.2

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||+|+++...   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            46778899999999999999875 58999999986432   234567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++|+|.+++.+.+ .+++.++..++.||+.||+|||+   .+|+||||||+|||++.++++||+|||+|+...... 
T Consensus        85 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-  159 (337)
T 1o6l_A           85 EYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-  159 (337)
T ss_dssp             ECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-
T ss_pred             eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-
Confidence            9999999999997643 57889999999999999999996   799999999999999999999999999998643222 


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                      ......+||+.|||||++.+..++.++|||||||++|||+||+.||....... ...            .+......-  
T Consensus       160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~------------~i~~~~~~~--  224 (337)
T 1o6l_A          160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-LFE------------LILMEEIRF--  224 (337)
T ss_dssp             CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHH------------HHHHCCCCC--
T ss_pred             CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH-HHH------------HHHcCCCCC--
Confidence            22345679999999999999999999999999999999999999996532111 000            111111100  


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERM-----NVKDALAN 1609 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----t~~evl~~ 1609 (1624)
                             +..++..+.+++.+|++.+|++||     +++|+++.
T Consensus       225 -------p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          225 -------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             -------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             -------CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence                   012345678899999999999999     89988764


No 115
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.7e-37  Score=373.91  Aligned_cols=266  Identities=23%  Similarity=0.368  Sum_probs=200.0

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhc--CCCceeEEEeeeccC----CeeE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI--RHRNLAKIVSSCSNP----GFKA 1407 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l--~HpNIv~l~g~~~~~----~~~~ 1407 (1624)
                      .++|...+.||+|+||+||+|++. ++.||||++....   ...+.+|.+++...  +||||+++++++...    ...+
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  111 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY  111 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred             ccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence            356788899999999999999885 8899999986432   23445566666554  999999999998776    6889


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCceEEcCCCCCcEEecCCCcEEEeeecce
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY-----STSIIHCDLKPSNVLLDDDMVAHLGDFGIA 1482 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-----~~~iiHrDlK~~NILld~~~~~kl~DFGla 1482 (1624)
                      +||||+++|+|.++++..  .+++.+++.++.|++.||+|||+.+     .++|+||||||+|||++.++.+||+|||+|
T Consensus       112 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a  189 (337)
T 3mdy_A          112 LITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  189 (337)
T ss_dssp             EEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence            999999999999999764  5899999999999999999999621     239999999999999999999999999999


Q ss_pred             eecCCCCCc---cccccccccccccccccCCCCcCcc------cchHHHHHHHHHHHcCC----------CCCCCCCccc
Q 047591         1483 KLLDGVDSM---KQTMTLATIGYMAPEYGSEGIVSTS------GDVYSFGILMMETLTRR----------KPTDDMFTGE 1543 (1624)
Q Consensus      1483 ~~~~~~~~~---~~~~~~gt~~y~APE~~~~~~~~~k------~DV~SfGvil~Elltg~----------~P~~~~~~~~ 1543 (1624)
                      +........   ......||+.|+|||++.+..++.+      +|||||||++|||+||+          .||.......
T Consensus       190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~  269 (337)
T 3mdy_A          190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD  269 (337)
T ss_dssp             EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence            876533221   1124579999999999877766655      99999999999999994          4443322111


Q ss_pred             hhhhhhhhhcCChhHHHHHhhh-ccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1544 VCLKHWVEESLPDAVTDVIDAN-LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1544 ~~l~~~~~~~~~~~~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      ....         ...+.+... .......  ......++..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus       270 ~~~~---------~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          270 PSYE---------DMREIVCIKKLRPSFPN--RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             CCHH---------HHHHHHTTSCCCCCCCG--GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             Cchh---------hhHHHHhhhccCccccc--cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence            1110         111111111 1111100  001135677899999999999999999999999999998764


No 116
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=5.4e-38  Score=376.13  Aligned_cols=252  Identities=23%  Similarity=0.315  Sum_probs=202.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            57888899999999999999876 68899999986443 23346789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC-Cc
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD-SM 1491 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~-~~ 1491 (1624)
                      +++|+|.+++... ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+.+.... ..
T Consensus        87 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  162 (323)
T 3tki_A           87 CSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (323)
T ss_dssp             CTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             CCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence            9999999988654 358999999999999999999996   799999999999999999999999999998764222 12


Q ss_pred             cccccccccccccccccCCCCc-CcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1492 KQTMTLATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~~~~-~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                      ......||+.|+|||++.+..+ +.++|||||||++|||+||+.||............|......           ..  
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-----------~~--  229 (323)
T 3tki_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-----------LN--  229 (323)
T ss_dssp             CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT-----------ST--
T ss_pred             ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc-----------CC--
Confidence            2234579999999999877665 789999999999999999999997643332222222221110           00  


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                            ....+...+.+++.+|++.||++|||++|+++.
T Consensus       230 ------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          230 ------PWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             ------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ------ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence                  011234567789999999999999999999763


No 117
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=8.2e-38  Score=378.15  Aligned_cols=265  Identities=23%  Similarity=0.335  Sum_probs=209.0

Q ss_pred             HHhCCCCcCCeEeecCceEEEEEEEc------CCceEEEEEeccch-hhHHHHHHHHHHHHHhc-CCCceeEEEeeeccC
Q 047591         1332 LATNGFSESNLLGTGIFSSVYKATFA------DGTNAAIKIFSLQE-DRALKSFDAECEVMRRI-RHRNLAKIVSSCSNP 1403 (1624)
Q Consensus      1332 ~at~~f~~~~~lG~G~~G~Vyk~~~~------~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~ 1403 (1624)
                      ...++|...+.||+|+||+||+|++.      ++..||||++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  121 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS  121 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence            34567888899999999999999862      35679999986442 34457899999999999 999999999999999


Q ss_pred             CeeEEEEEecCCCCHHHHHHhcCC----------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCC
Q 047591         1404 GFKALILQYMPQGSLEKWLYSHNY----------------------LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461 (1624)
Q Consensus      1404 ~~~~lV~ey~~~gsL~~~l~~~~~----------------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDl 1461 (1624)
                      +..++||||+++|+|.+++.....                      .+++..++.++.||+.||+|||+   .+|+||||
T Consensus       122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Di  198 (344)
T 1rjb_A          122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDL  198 (344)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTC
T ss_pred             CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCC
Confidence            999999999999999999986532                      37899999999999999999996   79999999


Q ss_pred             CCCcEEecCCCcEEEeeecceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCC
Q 047591         1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDM 1539 (1624)
Q Consensus      1462 K~~NILld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~ 1539 (1624)
                      ||+|||++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus       199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  278 (344)
T 1rjb_A          199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI  278 (344)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence            99999999999999999999987643322 12234568899999999888889999999999999999998 99999764


Q ss_pred             CccchhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 047591         1540 FTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFLK 1619 (1624)
Q Consensus      1540 ~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~~ 1619 (1624)
                      ..... ...            .+........       +..++..+.+++.+||+.+|++|||+.|+++.|+.+......
T Consensus       279 ~~~~~-~~~------------~~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~  338 (344)
T 1rjb_A          279 PVDAN-FYK------------LIQNGFKMDQ-------PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE  338 (344)
T ss_dssp             CCSHH-HHH------------HHHTTCCCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred             CcHHH-HHH------------HHhcCCCCCC-------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence            32211 111            1111111000       012345688899999999999999999999999988665443


No 118
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=5.6e-38  Score=365.57  Aligned_cols=251  Identities=23%  Similarity=0.384  Sum_probs=203.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccC--CeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNP--GFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~--~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|++. ++.||||+++...  ....+.|.+|++++++++||||+++++++.++  +..++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            35667789999999999999984 8889999987542  34567899999999999999999999999876  7789999


Q ss_pred             EecCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCc--eEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1411 QYMPQGSLEKWLYSHNY-LLNIEQRLDIMIDVACALEYLHQGYSTS--IIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gl~yLH~~~~~~--iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      ||+++|+|.++++.... .+++.++..|+.|++.||+|||+   .+  |+||||||+||+++.++.+||+|||++.... 
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-  164 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-  164 (271)
T ss_dssp             ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-
T ss_pred             cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeec-
Confidence            99999999999986543 58999999999999999999996   55  9999999999999999999999999875432 


Q ss_pred             CCCccccccccccccccccccCCCCcCc---ccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhh
Q 047591         1488 VDSMKQTMTLATIGYMAPEYGSEGIVST---SGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDA 1564 (1624)
Q Consensus      1488 ~~~~~~~~~~gt~~y~APE~~~~~~~~~---k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 1564 (1624)
                           .....||+.|+|||.+.+..++.   ++|||||||++|||+||+.||.+........             .....
T Consensus       165 -----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-------------~~~~~  226 (271)
T 3kmu_A          165 -----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM-------------KVALE  226 (271)
T ss_dssp             -----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH-------------HHHHS
T ss_pred             -----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH-------------HHHhc
Confidence                 22346899999999887655444   8999999999999999999997543221111             11111


Q ss_pred             hccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 047591         1565 NLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKT 1615 (1624)
Q Consensus      1565 ~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~ 1615 (1624)
                      ......       +..++..+.+++.+||+.+|++|||++|+++.|+++++
T Consensus       227 ~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          227 GLRPTI-------PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             CCCCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             CCCCCC-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            100000       01245568899999999999999999999999998754


No 119
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=9.9e-38  Score=371.95  Aligned_cols=262  Identities=22%  Similarity=0.335  Sum_probs=212.6

Q ss_pred             hCCCCcCCeEeecCceEEEEEEE------cCCceEEEEEeccch-hhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCe
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATF------ADGTNAAIKIFSLQE-DRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGF 1405 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~------~~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~ 1405 (1624)
                      .++|...+.||+|+||+||+|++      .+++.||||+++... ....+.+.+|+++++++ +||||+++++++.+++.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            35677788999999999999985      246789999986443 34467899999999999 99999999999999999


Q ss_pred             eEEEEEecCCCCHHHHHHhcCC-----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe
Q 047591         1406 KALILQYMPQGSLEKWLYSHNY-----------------LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL 1468 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~-----------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl 1468 (1624)
                      .++||||+++|+|.+++.....                 .+++.++..++.|+++||+|||+   .+|+||||||+||++
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~  178 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILL  178 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEE
Confidence            9999999999999999986542                 48999999999999999999996   799999999999999


Q ss_pred             cCCCcEEEeeecceeecCCCCCc-cccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhh
Q 047591         1469 DDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCL 1546 (1624)
Q Consensus      1469 d~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l 1546 (1624)
                      +.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||+| |+.||........  
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--  256 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--  256 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH--
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH--
Confidence            99999999999999876543221 2233467889999999888899999999999999999999 9999875432211  


Q ss_pred             hhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1547 KHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1547 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                                 ....+........       +..++..+.+++.+||+.+|++|||+.|+++.|+++.....
T Consensus       257 -----------~~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  310 (313)
T 1t46_A          257 -----------FYKMIKEGFRMLS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST  310 (313)
T ss_dssp             -----------HHHHHHHTCCCCC-------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             -----------HHHHhccCCCCCC-------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence                       1111111111000       01234568889999999999999999999999998876643


No 120
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=1.2e-37  Score=371.43  Aligned_cols=259  Identities=25%  Similarity=0.419  Sum_probs=211.0

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc------CCceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCee
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA------DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFK 1406 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~------~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~ 1406 (1624)
                      .++|...+.||+|+||.||+|+..      +++.||||++... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            456777889999999999999862      3578999998643 344567899999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCC
Q 047591         1407 ALILQYMPQGSLEKWLYSHN-----------------------YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKP 1463 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~ 1463 (1624)
                      ++||||+++|+|.+++....                       ..+++.++.+++.|+++||+|||+   .+|+||||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp  178 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAA  178 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccch
Confidence            99999999999999998643                       237899999999999999999996   7999999999


Q ss_pred             CcEEecCCCcEEEeeecceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCc
Q 047591         1464 SNVLLDDDMVAHLGDFGIAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFT 1541 (1624)
Q Consensus      1464 ~NILld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~ 1541 (1624)
                      +||++++++.+||+|||+++....... .......+|+.|+|||...+..++.++|||||||++|||+| |+.||.....
T Consensus       179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  258 (314)
T 2ivs_A          179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP  258 (314)
T ss_dssp             GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999999987754332 12234467889999999988889999999999999999999 9999875432


Q ss_pred             cchhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1542 GEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1542 ~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      ...              .+.+........       +..++..+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus       259 ~~~--------------~~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          259 ERL--------------FNLLKTGHRMER-------PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             GGH--------------HHHHHTTCCCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHH--------------HHHhhcCCcCCC-------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            211              111111100000       013456688999999999999999999999999988654


No 121
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=4.7e-38  Score=376.81  Aligned_cols=261  Identities=26%  Similarity=0.467  Sum_probs=195.7

Q ss_pred             HHHhCCCCcCCeEeecCceEEEEEEEcCC----ceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC
Q 047591         1331 RLATNGFSESNLLGTGIFSSVYKATFADG----TNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG 1404 (1624)
Q Consensus      1331 ~~at~~f~~~~~lG~G~~G~Vyk~~~~~~----~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~ 1404 (1624)
                      ....++|...+.||+|+||+||+|++...    ..||||+++..  .....+.|.+|++++++++||||+++++++...+
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   98 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR   98 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence            34456788889999999999999987543    27999998654  3345688999999999999999999999998766


Q ss_pred             ee------EEEEEecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc
Q 047591         1405 FK------ALILQYMPQGSLEKWLYSHN-----YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV 1473 (1624)
Q Consensus      1405 ~~------~lV~ey~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~ 1473 (1624)
                      ..      ++||||+++|+|.+++....     ..+++.++.+|+.|+++||+|||+   .+|+||||||+|||+++++.
T Consensus        99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~  175 (323)
T 3qup_A           99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMT  175 (323)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSC
T ss_pred             cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCC
Confidence            55      99999999999999996432     258999999999999999999997   79999999999999999999


Q ss_pred             EEEeeecceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhh
Q 047591         1474 AHLGDFGIAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVE 1551 (1624)
Q Consensus      1474 ~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~ 1551 (1624)
                      +||+|||+|+....... .......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||......+. ....  
T Consensus       176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-~~~~--  252 (323)
T 3qup_A          176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI-YNYL--  252 (323)
T ss_dssp             EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HHHH--
T ss_pred             EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH-HHHH--
Confidence            99999999987644322 12233457889999999988899999999999999999999 8999875432211 1111  


Q ss_pred             hcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 047591         1552 ESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKT 1615 (1624)
Q Consensus      1552 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~ 1615 (1624)
                                ........        +..++..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus       253 ----------~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          253 ----------IGGNRLKQ--------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             ----------HTTCCCCC--------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----------hcCCCCCC--------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                      11110000        01344568899999999999999999999999998865


No 122
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=5.8e-38  Score=369.80  Aligned_cols=259  Identities=26%  Similarity=0.443  Sum_probs=196.0

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      .+.|...+.||+|+||+||+|++.  ..||||+++..  .....+.|.+|++++++++||||+++++++ ..+..++|||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e   99 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ   99 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence            456788899999999999999864  36999998643  344567899999999999999999999976 4556899999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC-C
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD-S 1490 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~-~ 1490 (1624)
                      |+++|+|.+++......+++.+++.++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++...... .
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  176 (289)
T 3og7_A          100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS  176 (289)
T ss_dssp             CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred             ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence            999999999998777779999999999999999999996   799999999999999999999999999998654321 2


Q ss_pred             ccccccccccccccccccC---CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1491 MKQTMTLATIGYMAPEYGS---EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~---~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      .......||+.|+|||.+.   ...++.++|||||||++|||+||+.||......+....             .+.....
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-------------~~~~~~~  243 (289)
T 3og7_A          177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE-------------MVGRGSL  243 (289)
T ss_dssp             -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHH-------------HHHHTSC
T ss_pred             ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHH-------------Hhccccc
Confidence            2223457999999999875   66789999999999999999999999976433221111             1111110


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIK 1614 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~ 1614 (1624)
                      .....   .....++..+.+++.+||+.+|++|||++|+++.|+++.
T Consensus       244 ~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          244 SPDLS---KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             CCCTT---SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             Ccchh---hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            00000   001234567889999999999999999999999999864


No 123
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1.2e-37  Score=380.23  Aligned_cols=247  Identities=22%  Similarity=0.300  Sum_probs=199.4

Q ss_pred             cCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEecCCCC
Q 047591         1339 ESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGS 1417 (1624)
Q Consensus      1339 ~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~~~gs 1417 (1624)
                      ..++||+|+||+||+|+.. +|+.||||+++.......+.|.+|++++++++|||||++++++.+.+..++||||+++|+
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~  172 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE  172 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence            3567999999999999875 689999999976655667889999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe--cCCCcEEEeeecceeecCCCCCccccc
Q 047591         1418 LEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL--DDDMVAHLGDFGIAKLLDGVDSMKQTM 1495 (1624)
Q Consensus      1418 L~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl--d~~~~~kl~DFGla~~~~~~~~~~~~~ 1495 (1624)
                      |.+++......+++.++..++.||++||+|||+   .+|+||||||+|||+  ++++.+||+|||+|+.......  ...
T Consensus       173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~~  247 (373)
T 2x4f_A          173 LFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKV  247 (373)
T ss_dssp             EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CCC
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--ccc
Confidence            999998776778999999999999999999996   799999999999999  6778999999999998754332  234


Q ss_pred             cccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHHHH
Q 047591         1496 TLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADI 1575 (1624)
Q Consensus      1496 ~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 1575 (1624)
                      ..||+.|+|||++....++.++|||||||++|||+||+.||...... ..+..+.....            .....    
T Consensus       248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~------------~~~~~----  310 (373)
T 2x4f_A          248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRW------------DLEDE----  310 (373)
T ss_dssp             CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCC------------CSCSG----
T ss_pred             ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccC------------CCChh----
Confidence            56999999999998889999999999999999999999999753221 11111111110            00000    


Q ss_pred             HHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1576 AAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1576 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                       ....++..+.+++.+|++.+|++|||+.|+++
T Consensus       311 -~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          311 -EFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             -GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence             01123456889999999999999999999987


No 124
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=1.9e-38  Score=390.57  Aligned_cols=259  Identities=19%  Similarity=0.258  Sum_probs=208.4

Q ss_pred             HHHHHHHhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeecc
Q 047591         1327 YQELRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402 (1624)
Q Consensus      1327 ~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~ 1402 (1624)
                      +.+++...++|...++||+|+||+||+|+.. +++.||+|+++...   ....+.+.+|+.+++.++|||||+++++|.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            4566677889999999999999999999886 57889999986432   1233568899999999999999999999999


Q ss_pred             CCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecce
Q 047591         1403 PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIA 1482 (1624)
Q Consensus      1403 ~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla 1482 (1624)
                      ++..++|||||++|+|.++++..  .+++..+..++.||+.||+|||+   .+||||||||+|||++.++++||+|||+|
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a  215 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTC  215 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEecccee
Confidence            99999999999999999999764  47888899999999999999996   79999999999999999999999999999


Q ss_pred             eecCCCCCccccccccccccccccccCCCC----cCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhH
Q 047591         1483 KLLDGVDSMKQTMTLATIGYMAPEYGSEGI----VSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAV 1558 (1624)
Q Consensus      1483 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~----~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~ 1558 (1624)
                      +.............+||+.|||||++....    ++.++|||||||++|||+||+.||......+ ....          
T Consensus       216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~----------  284 (410)
T 3v8s_A          216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSK----------  284 (410)
T ss_dssp             EECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHH----------
T ss_pred             EeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh-HHHH----------
Confidence            887654433344568999999999876554    8899999999999999999999997532111 1111          


Q ss_pred             HHHHhhh-ccCCchHHHHHHHHHhHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 047591         1559 TDVIDAN-LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEE--RMNVKDALAN 1609 (1624)
Q Consensus      1559 ~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~--RPt~~evl~~ 1609 (1624)
                        ++... .....      ....++..+.+++.+|+..+|++  ||+++|++++
T Consensus       285 --i~~~~~~~~~p------~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          285 --IMNHKNSLTFP------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             --HHTHHHHCCCC------TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             --HHhccccccCC------CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence              11100 00000      00123456788999999999988  9999999864


No 125
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=7.4e-38  Score=368.33  Aligned_cols=253  Identities=24%  Similarity=0.418  Sum_probs=203.5

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchh-------hHHHHHHHHHHHHHhcCCCceeEEEeeeccCCe
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQED-------RALKSFDAECEVMRRIRHRNLAKIVSSCSNPGF 1405 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~-------~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~ 1405 (1624)
                      .++|...+.||+|+||+||+|+.. +++.||||++.....       ...+.|.+|++++++++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            356777889999999999999884 688999999854321       11278999999999999999999999997665 


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCc--eEEcCCCCCcEEecCCCc-----EEEee
Q 047591         1406 KALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS--IIHCDLKPSNVLLDDDMV-----AHLGD 1478 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~--iiHrDlK~~NILld~~~~-----~kl~D 1478 (1624)
                       ++||||+++|+|.+++.+....+++..+..++.|++.||+|||+   .+  |+||||||+||+++.++.     +||+|
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D  172 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD  172 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred             -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence             69999999999999998877789999999999999999999996   56  999999999999988776     99999


Q ss_pred             ecceeecCCCCCcccccccccccccccccc--CCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCCh
Q 047591         1479 FGIAKLLDGVDSMKQTMTLATIGYMAPEYG--SEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPD 1556 (1624)
Q Consensus      1479 FGla~~~~~~~~~~~~~~~gt~~y~APE~~--~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~ 1556 (1624)
                      ||+|+....    ......||+.|+|||++  ....++.++|||||||++|||+||+.||...............     
T Consensus       173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-----  243 (287)
T 4f0f_A          173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR-----  243 (287)
T ss_dssp             CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH-----
T ss_pred             CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh-----
Confidence            999985432    23345799999999987  4566899999999999999999999999754332221111111     


Q ss_pred             hHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 047591         1557 AVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKI 1613 (1624)
Q Consensus      1557 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i 1613 (1624)
                            ........       +..++..+.+++.+||+.||++|||++|+++.|+++
T Consensus       244 ------~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          244 ------EEGLRPTI-------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             ------HSCCCCCC-------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             ------ccCCCCCC-------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence                  11110000       123456788999999999999999999999999864


No 126
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=8.9e-38  Score=364.33  Aligned_cols=253  Identities=24%  Similarity=0.399  Sum_probs=193.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchh----hHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQED----RALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~----~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|++. ++.||||+++....    ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            56778899999999999999874 88999999864322    23578999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC--------CCcEEEeeecce
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD--------DMVAHLGDFGIA 1482 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~--------~~~~kl~DFGla 1482 (1624)
                      ||+++|+|.+++..  ..+++..+..++.|+++||+|||+....+|+||||||+||+++.        ++.+||+|||++
T Consensus        86 e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~  163 (271)
T 3dtc_A           86 EFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA  163 (271)
T ss_dssp             ECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred             EcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence            99999999999853  46889999999999999999999732234999999999999986        778999999999


Q ss_pred             eecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHH
Q 047591         1483 KLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVI 1562 (1624)
Q Consensus      1483 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1562 (1624)
                      +......   .....||+.|+|||...+..++.++|||||||++|||+||+.||.......... .            ..
T Consensus       164 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-~------------~~  227 (271)
T 3dtc_A          164 REWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY-G------------VA  227 (271)
T ss_dssp             ---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH-H------------HH
T ss_pred             ccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-h------------hh
Confidence            8664322   224579999999999988889999999999999999999999997542211110 0            00


Q ss_pred             hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 047591         1563 DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKI 1613 (1624)
Q Consensus      1563 d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i 1613 (1624)
                      ........       +..++..+.+++.+||+.+|++|||+.|+++.|+++
T Consensus       228 ~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          228 MNKLALPI-------PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             TSCCCCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             cCCCCCCC-------CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            00000000       123456688999999999999999999999999864


No 127
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4e-38  Score=384.33  Aligned_cols=258  Identities=23%  Similarity=0.412  Sum_probs=197.1

Q ss_pred             CCcCCeEeecCceEEEEEEEc--CC--ceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeecc-CCeeEEEE
Q 047591         1337 FSESNLLGTGIFSSVYKATFA--DG--TNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSN-PGFKALIL 1410 (1624)
Q Consensus      1337 f~~~~~lG~G~~G~Vyk~~~~--~~--~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~-~~~~~lV~ 1410 (1624)
                      |...++||+|+||+||+|++.  ++  ..||||.++.. .....++|.+|++++++++||||++++++|.+ ++..++||
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            445678999999999999874  22  35899988643 33556889999999999999999999998754 56789999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++|+|.++++.....+++.+++.++.||++||+|||+   .+|+||||||+|||+++++.+||+|||+|+.......
T Consensus       171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence            9999999999998777778999999999999999999996   7999999999999999999999999999987643221


Q ss_pred             ---ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhc
Q 047591         1491 ---MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANL 1566 (1624)
Q Consensus      1491 ---~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 1566 (1624)
                         .......+|+.|+|||.+.+..++.++|||||||++|||+| |..||......+..  ..+.           ....
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~--~~~~-----------~~~~  314 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLL-----------QGRR  314 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH--HHHH-----------TTCC
T ss_pred             ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH--HHHH-----------cCCC
Confidence               11233467889999999988899999999999999999999 56677543222111  1110           0000


Q ss_pred             cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1567 LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1567 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      ...        +..++..+.+++.+||+.+|++|||++|+++.|+++...+.
T Consensus       315 ~~~--------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          315 LLQ--------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             CCC--------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             CCC--------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            000        12345678899999999999999999999999999876543


No 128
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=4.5e-38  Score=379.12  Aligned_cols=280  Identities=22%  Similarity=0.337  Sum_probs=199.8

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHH--HHhcCCCceeEEEeeec-----cCCee
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEV--MRRIRHRNLAKIVSSCS-----NPGFK 1406 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~--l~~l~HpNIv~l~g~~~-----~~~~~ 1406 (1624)
                      .++|...+.||+|+||+||+|++ +++.||||++.....   ..+..|.++  +..++||||+++++++.     .....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            35778889999999999999987 688999999864332   334444444  45689999999998542     23467


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcC------CCceEEcCCCCCcEEecCCCcEEEeeec
Q 047591         1407 ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY------STSIIHCDLKPSNVLLDDDMVAHLGDFG 1480 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~------~~~iiHrDlK~~NILld~~~~~kl~DFG 1480 (1624)
                      ++||||+++|+|.+++....  .++..+.+|+.||++||+|||+.+      .++|+||||||+|||++.++.+||+|||
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG  165 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG  165 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred             EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence            89999999999999997654  488999999999999999999621      1299999999999999999999999999


Q ss_pred             ceeecCCCCC-------ccccccccccccccccccCC-------CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhh
Q 047591         1481 IAKLLDGVDS-------MKQTMTLATIGYMAPEYGSE-------GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCL 1546 (1624)
Q Consensus      1481 la~~~~~~~~-------~~~~~~~gt~~y~APE~~~~-------~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l 1546 (1624)
                      +|+.+.....       .......||+.|+|||++.+       ..++.++|||||||++|||+||+.|+..........
T Consensus       166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~  245 (336)
T 3g2f_A          166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ  245 (336)
T ss_dssp             TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred             ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence            9987653221       11224569999999998876       467789999999999999999988764321111111


Q ss_pred             hhhhhh--cCC--hhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 047591         1547 KHWVEE--SLP--DAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFLK 1619 (1624)
Q Consensus      1547 ~~~~~~--~~~--~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~~ 1619 (1624)
                      ..+...  ..+  +.....+..................++..+.+++.+||+.||++|||++|+++.|+++...+.+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~  322 (336)
T 3g2f_A          246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER  322 (336)
T ss_dssp             CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred             HhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence            111100  001  0111111111000000000000123456789999999999999999999999999998876544


No 129
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=6.9e-38  Score=376.07  Aligned_cols=270  Identities=23%  Similarity=0.324  Sum_probs=212.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEE-----cCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeec--cCCeeE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATF-----ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS--NPGFKA 1407 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~-----~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~--~~~~~~ 1407 (1624)
                      ++|...+.||+|+||+||+|++     .+++.||||++........+.|.+|++++++++||||+++++++.  +.+..+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            4577778999999999999985     357889999997666666788999999999999999999999886  456689


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      +||||+++|+|.+++......+++.+++.|+.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPL  179 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence            9999999999999998766678999999999999999999996   7999999999999999999999999999997754


Q ss_pred             CCC--ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChh---HHHHH
Q 047591         1488 VDS--MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDA---VTDVI 1562 (1624)
Q Consensus      1488 ~~~--~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~---~~~~~ 1562 (1624)
                      ...  .......||+.|+|||++.+..++.++|||||||++|||+||+.||......  ....+........   ..+.+
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  257 (327)
T 3lxl_A          180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE--FLRMMGCERDVPALSRLLELL  257 (327)
T ss_dssp             TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH--HHHHCC----CCHHHHHHHHH
T ss_pred             CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccch--hhhhcccccccccHHHHHHHh
Confidence            322  1223356888999999998888999999999999999999999998642111  0111100000111   11122


Q ss_pred             hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1563 DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1563 d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      .......       .+..++..+.+++.+||+.+|++|||++|+++.|+++...
T Consensus       258 ~~~~~~~-------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          258 EEGQRLP-------APPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             HTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred             hcccCCC-------CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            1111110       0124567789999999999999999999999999988653


No 130
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=6.7e-38  Score=367.09  Aligned_cols=259  Identities=25%  Similarity=0.409  Sum_probs=210.3

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      .++|...+.||+|+||+||+|+..++..||||++.... ...+.|.+|++++++++||||+++++++. .+..++||||+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   89 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM   89 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence            45677788999999999999998888899999986432 23578999999999999999999999986 45689999999


Q ss_pred             CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcc
Q 047591         1414 PQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~ 1492 (1624)
                      ++|+|.+++.... ..+++.++.+++.|++.||+|||+   .+|+||||||+||++++++.+||+|||+++.........
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  166 (279)
T 1qpc_A           90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA  166 (279)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence            9999999997532 368999999999999999999996   799999999999999999999999999999876543333


Q ss_pred             ccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCch
Q 047591         1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEE 1571 (1624)
Q Consensus      1493 ~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 1571 (1624)
                      .....+|+.|+|||...+..++.++|||||||++|||+| |+.||......+  ....            +........ 
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~------------~~~~~~~~~-  231 (279)
T 1qpc_A          167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQN------------LERGYRMVR-  231 (279)
T ss_dssp             CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHH------------HHTTCCCCC-
T ss_pred             ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HHHH------------HhcccCCCC-
Confidence            344567889999999988889999999999999999999 899986532211  1111            110000000 


Q ss_pred             HHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1572 EADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1572 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                            +..++..+.+++.+|++.+|++|||++|+++.|+++.....
T Consensus       232 ------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  272 (279)
T 1qpc_A          232 ------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE  272 (279)
T ss_dssp             ------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             ------cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence                  01345668899999999999999999999999999877644


No 131
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=1.5e-37  Score=371.70  Aligned_cols=271  Identities=25%  Similarity=0.382  Sum_probs=210.7

Q ss_pred             CCcCCeEeecCceEEEEEEEc-----CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeecc--CCeeEE
Q 047591         1337 FSESNLLGTGIFSSVYKATFA-----DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSN--PGFKAL 1408 (1624)
Q Consensus      1337 f~~~~~lG~G~~G~Vyk~~~~-----~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~--~~~~~l 1408 (1624)
                      |...+.||+|+||+||+|.+.     +++.||||+++... ....+.|.+|++++++++||||+++++++.+  ....++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            356688999999999998763     57889999997543 3456789999999999999999999999976  467899


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC
Q 047591         1409 ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      ||||+++|+|.+++....  +++.+++.++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++.....
T Consensus       113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  187 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  187 (318)
T ss_dssp             EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred             EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence            999999999999997653  8999999999999999999997   79999999999999999999999999999987543


Q ss_pred             CC--ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCC-hhHHHHHhhh
Q 047591         1489 DS--MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLP-DAVTDVIDAN 1565 (1624)
Q Consensus      1489 ~~--~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~-~~~~~~~d~~ 1565 (1624)
                      ..  .......||+.|+|||++.+..++.++|||||||++|||+||+.||............+...... ....+.++..
T Consensus       188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (318)
T 3lxp_A          188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG  267 (318)
T ss_dssp             CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred             ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence            32  12233468889999999988889999999999999999999999986422111111111000000 0111222211


Q ss_pred             ccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 047591         1566 LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFLK 1619 (1624)
Q Consensus      1566 l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~~ 1619 (1624)
                      ....       .+..++..+.+++.+||+.+|++|||++|+++.|+++.+++..
T Consensus       268 ~~~~-------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~  314 (318)
T 3lxp_A          268 ERLP-------RPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG  314 (318)
T ss_dssp             CCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred             cCCC-------CCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence            1110       0123567789999999999999999999999999999887653


No 132
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=4e-38  Score=373.39  Aligned_cols=266  Identities=21%  Similarity=0.388  Sum_probs=206.8

Q ss_pred             CCCcCCeEeecCceEEEEEEE-----cCCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccC--CeeE
Q 047591         1336 GFSESNLLGTGIFSSVYKATF-----ADGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNP--GFKA 1407 (1624)
Q Consensus      1336 ~f~~~~~lG~G~~G~Vyk~~~-----~~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~--~~~~ 1407 (1624)
                      .|...+.||+|+||.||+|++     .+++.||||++.... ....+.+.+|++++++++||||+++++++.++  ...+
T Consensus        22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  101 (302)
T 4e5w_A           22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK  101 (302)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred             hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence            356678999999999999985     357889999987443 33457899999999999999999999999876  6689


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      +||||+++|+|.+++......+++.++..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+|+....
T Consensus       102 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  178 (302)
T 4e5w_A          102 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET  178 (302)
T ss_dssp             EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             EEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccccccccC
Confidence            9999999999999998776779999999999999999999996   7999999999999999999999999999988754


Q ss_pred             CCC--ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCCh----hHHHH
Q 047591         1488 VDS--MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPD----AVTDV 1561 (1624)
Q Consensus      1488 ~~~--~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~----~~~~~ 1561 (1624)
                      ...  .......||..|+|||.+.+..++.++|||||||++|||+||+.|+......   ...........    .....
T Consensus       179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~  255 (302)
T 4e5w_A          179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTHGQMTVTRLVNT  255 (302)
T ss_dssp             TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCGGGHHHHHHHH
T ss_pred             CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcccccCHHHHHHH
Confidence            332  2223456888999999998888999999999999999999999986432110   00110000000    01111


Q ss_pred             HhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 047591         1562 IDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIK 1614 (1624)
Q Consensus      1562 ~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~ 1614 (1624)
                      +.......       .+..++..+.+++.+||+.||++|||++|+++.|+++.
T Consensus       256 ~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          256 LKEGKRLP-------CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HHTTCCCC-------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HhccCCCC-------CCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            11110000       01234567889999999999999999999999999864


No 133
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-37  Score=371.70  Aligned_cols=258  Identities=24%  Similarity=0.424  Sum_probs=203.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcC-----CceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFAD-----GTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKAL 1408 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~-----~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~l 1408 (1624)
                      +.|...+.||+|+||+||+|++..     +..||||+++.. .....+.|.+|++++++++||||+++++++.+.+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            345567899999999999998753     235999998643 33455689999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC
Q 047591         1409 ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      ||||+++|+|.+++......+++.+++.++.|++.||+|||+   .+|+||||||+||++++++.+||+|||+++.....
T Consensus       124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  200 (333)
T 1mqb_A          124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  200 (333)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence            999999999999998876779999999999999999999997   79999999999999999999999999999876533


Q ss_pred             CCc--cccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhh
Q 047591         1489 DSM--KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDAN 1565 (1624)
Q Consensus      1489 ~~~--~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 1565 (1624)
                      ...  ......+|+.|+|||.+....++.++|||||||++|||+| |+.||......+.              .+.+...
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~--------------~~~~~~~  266 (333)
T 1mqb_A          201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV--------------MKAINDG  266 (333)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--------------HHHHHTT
T ss_pred             cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHH--------------HHHHHCC
Confidence            211  1223356889999999988899999999999999999999 9999865322111              1111111


Q ss_pred             ccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1566 LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1566 l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      .....       +..++..+.+++.+||+.+|++||++.|+++.|+++...
T Consensus       267 ~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          267 FRLPT-------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             CCCCC-------CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CcCCC-------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            00000       113456688999999999999999999999999988654


No 134
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=3e-37  Score=371.68  Aligned_cols=260  Identities=25%  Similarity=0.458  Sum_probs=210.4

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc--------CCceEEEEEeccc-hhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccC
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA--------DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNP 1403 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~--------~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~ 1403 (1624)
                      .++|...+.||+|+||+||+|++.        ++..||||+++.. .....+.+.+|+++++++ +||||++++++|.+.
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            356777889999999999999873        4677999998644 334567899999999999 999999999999999


Q ss_pred             CeeEEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe
Q 047591         1404 GFKALILQYMPQGSLEKWLYSHN---------------YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL 1468 (1624)
Q Consensus      1404 ~~~~lV~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl 1468 (1624)
                      +..++||||+++|+|.+++....               ..+++.+++.++.||++||+|||+   .+|+||||||+||++
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll  190 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV  190 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEE
Confidence            99999999999999999998643               248899999999999999999996   799999999999999


Q ss_pred             cCCCcEEEeeecceeecCCCCCc-cccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhh
Q 047591         1469 DDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCL 1546 (1624)
Q Consensus      1469 d~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l 1546 (1624)
                      +.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......+  +
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~  268 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--L  268 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--H
T ss_pred             cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH--H
Confidence            99999999999999877543321 2233467889999999888889999999999999999999 999986532111  1


Q ss_pred             hhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1547 KHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1547 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                      .            +.+........       +..++..+.+++.+||+.+|++|||+.|+++.|+++.+..
T Consensus       269 ~------------~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~  320 (334)
T 2pvf_A          269 F------------KLLKEGHRMDK-------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  320 (334)
T ss_dssp             H------------HHHHHTCCCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             H------------HHHhcCCCCCC-------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            1            11111100000       1134566889999999999999999999999999987653


No 135
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1e-37  Score=404.55  Aligned_cols=253  Identities=22%  Similarity=0.365  Sum_probs=204.0

Q ss_pred             eEeecCceEEEEEEEc---CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEecCCCC
Q 047591         1342 LLGTGIFSSVYKATFA---DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGS 1417 (1624)
Q Consensus      1342 ~lG~G~~G~Vyk~~~~---~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~~~gs 1417 (1624)
                      .||+|+||+||+|.+.   ++..||||+++... ....+.|.+|+++|++++|||||+++++|.. +..++|||||++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            7999999999999874   45679999987542 3456889999999999999999999999976 56899999999999


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCc--cccc
Q 047591         1418 LEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM--KQTM 1495 (1624)
Q Consensus      1418 L~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~--~~~~ 1495 (1624)
                      |.+++......+++.++..|+.|||.||+|||+   .+||||||||+|||+++++.+||+|||+|+.+......  ....
T Consensus       422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~  498 (613)
T 2ozo_A          422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  498 (613)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence            999998777779999999999999999999996   79999999999999999999999999999876433221  1223


Q ss_pred             cccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHHH
Q 047591         1496 TLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEAD 1574 (1624)
Q Consensus      1496 ~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 1574 (1624)
                      ..+|+.|||||++....++.++|||||||++|||+| |+.||......+.              .+.+.......     
T Consensus       499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--------------~~~i~~~~~~~-----  559 (613)
T 2ozo_A          499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--------------MAFIEQGKRME-----  559 (613)
T ss_dssp             ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH--------------HHHHHTTCCCC-----
T ss_pred             CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--------------HHHHHcCCCCC-----
Confidence            346789999999988899999999999999999998 9999976432211              11111111000     


Q ss_pred             HHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 047591         1575 IAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFLK 1619 (1624)
Q Consensus      1575 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~~ 1619 (1624)
                        .+..|+..+.+++.+||+.+|++||+|.|+++.|+.+......
T Consensus       560 --~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~  602 (613)
T 2ozo_A          560 --CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  602 (613)
T ss_dssp             --CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred             --CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence              1124567789999999999999999999999999998776544


No 136
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=5.2e-38  Score=376.85  Aligned_cols=256  Identities=23%  Similarity=0.392  Sum_probs=202.6

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCce----EEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTN----AAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKAL 1408 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~----vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~l 1408 (1624)
                      ++|...+.||+|+||+||+|++. +++.    ||+|.+.... ....+.+.+|+.++++++||||++++++|. .+..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            46777789999999999999875 4444    7777764332 233457789999999999999999999986 456889


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC
Q 047591         1409 ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      ||||+++|+|.+++......+++..+..|+.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+.....
T Consensus        92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  168 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD  168 (325)
T ss_dssp             EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred             EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence            999999999999998776678999999999999999999996   79999999999999999999999999999877543


Q ss_pred             CC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhc
Q 047591         1489 DS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANL 1566 (1624)
Q Consensus      1489 ~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 1566 (1624)
                      .. .......||++|+|||++.+..++.++|||||||++|||+| |+.||......+.              .+.+....
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--------------~~~~~~~~  234 (325)
T 3kex_A          169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV--------------PDLLEKGE  234 (325)
T ss_dssp             TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH--------------HHHHHTTC
T ss_pred             cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH--------------HHHHHcCC
Confidence            32 22334568889999999988899999999999999999999 9999976432211              11111110


Q ss_pred             cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 047591         1567 LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKT 1615 (1624)
Q Consensus      1567 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~ 1615 (1624)
                      ....       +..++..+.+++.+||+.+|++|||++|+++.|+++..
T Consensus       235 ~~~~-------~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          235 RLAQ-------PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             BCCC-------CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             CCCC-------CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            0000       01234457789999999999999999999999998754


No 137
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.1e-37  Score=370.09  Aligned_cols=251  Identities=23%  Similarity=0.300  Sum_probs=204.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchh------hHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQED------RALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~------~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      +.|...+.||+|+||+||+|+.. +|+.||||++.....      ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            34777889999999999999875 588999999864321      13578999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCC----cEEEeeeccee
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDM----VAHLGDFGIAK 1483 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~----~~kl~DFGla~ 1483 (1624)
                      +||||+++|+|.+++... ..+++.++..++.||+.||+|||+   .+|+||||||+|||++.++    .+||+|||+|+
T Consensus        91 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  166 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  166 (326)
T ss_dssp             EEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence            999999999999999754 458899999999999999999996   7999999999999999887    89999999998


Q ss_pred             ecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHh
Q 047591         1484 LLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563 (1624)
Q Consensus      1484 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d 1563 (1624)
                      ......  ......||+.|+|||++....++.++|||||||++|||+||+.||......+ .+...            ..
T Consensus       167 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~------------~~  231 (326)
T 2y0a_A          167 KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANV------------SA  231 (326)
T ss_dssp             ECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHH------------HH
T ss_pred             ECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHH------------Hh
Confidence            875332  2234579999999999988899999999999999999999999996532111 11110            00


Q ss_pred             hhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1564 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ... ...    ......++..+.+++.+|++.||++|||+.|+++.
T Consensus       232 ~~~-~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          232 VNY-EFE----DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             TCC-CCC----HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             cCC-CcC----ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            000 000    11122345668899999999999999999999873


No 138
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-37  Score=381.11  Aligned_cols=252  Identities=21%  Similarity=0.281  Sum_probs=206.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      +.|...+.||+|+||+||+|+.. +|+.||+|++..........+.+|++++++++|||||++++++.+.+..++||||+
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~  130 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  130 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence            46888899999999999999875 68899999987655555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC--CCcEEEeeecceeecCCCCCc
Q 047591         1414 PQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD--DMVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~--~~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      ++|+|.+++...+..+++.++..++.||+.||+|||+   .+|+||||||+|||++.  ++.+||+|||+|+......  
T Consensus       131 ~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~--  205 (387)
T 1kob_A          131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--  205 (387)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--
T ss_pred             CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCc--
Confidence            9999999998766678999999999999999999996   79999999999999974  5789999999999875432  


Q ss_pred             cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCch
Q 047591         1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEE 1571 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 1571 (1624)
                      ......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ..+.......            ..... 
T Consensus       206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~------------~~~~~-  271 (387)
T 1kob_A          206 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCD------------WEFDE-  271 (387)
T ss_dssp             CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCC------------CCCCS-
T ss_pred             ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCC------------CCCCc-
Confidence            223457999999999999889999999999999999999999999753211 1111111100            00000 


Q ss_pred             HHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1572 EADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1572 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                          .....++..+.+++.+|++.||++|||+.|+++.
T Consensus       272 ----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          272 ----DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             ----STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             ----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                0001234567899999999999999999999873


No 139
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=5.3e-38  Score=369.66  Aligned_cols=261  Identities=21%  Similarity=0.388  Sum_probs=215.2

Q ss_pred             HHHhCCCCcCCeEeecCceEEEEEEEcC-CceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1331 RLATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1331 ~~at~~f~~~~~lG~G~~G~Vyk~~~~~-~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      +...++|...+.||+|+||+||+|++.. +..||||++... ....+.|.+|++++++++||||+++++++.+++..++|
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v   87 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII   87 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence            3455678888899999999999998864 788999998643 33457899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC
Q 047591         1410 LQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      |||+++|+|.+++... ...+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++.....
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  164 (288)
T 3kfa_A           88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD  164 (288)
T ss_dssp             EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred             EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence            9999999999999864 3568999999999999999999997   78999999999999999999999999999877644


Q ss_pred             CCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1489 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      .........+|+.|+|||...+..++.++|||||||++|||++ |+.||.......  .            .+.+.....
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~------------~~~~~~~~~  230 (288)
T 3kfa_A          165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--V------------YELLEKDYR  230 (288)
T ss_dssp             SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--H------------HHHHHTTCC
T ss_pred             ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--H------------HHHHhccCC
Confidence            4334445568889999999988899999999999999999999 999986532211  1            111111111


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      ...       +..++..+.+++.+|++.+|++|||++|+++.|+++...
T Consensus       231 ~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          231 MER-------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             CCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCC-------CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence            000       123456688999999999999999999999999987654


No 140
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=3.9e-37  Score=371.73  Aligned_cols=269  Identities=21%  Similarity=0.346  Sum_probs=208.2

Q ss_pred             HHhCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHh--cCCCceeEEEeeeccCC----e
Q 047591         1332 LATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRR--IRHRNLAKIVSSCSNPG----F 1405 (1624)
Q Consensus      1332 ~at~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~--l~HpNIv~l~g~~~~~~----~ 1405 (1624)
                      ...++|...+.||+|+||+||+|++ +++.||||++....   .+.+.+|+++++.  ++||||+++++++...+    .
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~  114 (342)
T 1b6c_B           39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ  114 (342)
T ss_dssp             HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred             cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence            3446788889999999999999988 58999999986432   3567889999988  79999999999998765    7


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCceEEcCCCCCcEEecCCCcEEEeeec
Q 047591         1406 KALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-----YSTSIIHCDLKPSNVLLDDDMVAHLGDFG 1480 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~-----~~~~iiHrDlK~~NILld~~~~~kl~DFG 1480 (1624)
                      .++||||+++|+|.+++.+.  .+++.+++.++.|++.||+|||..     +..+|+||||||+|||++.++.+||+|||
T Consensus       115 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg  192 (342)
T 1b6c_B          115 LWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  192 (342)
T ss_dssp             EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCT
T ss_pred             eEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECC
Confidence            89999999999999999764  589999999999999999999931     13799999999999999999999999999


Q ss_pred             ceeecCCCCCc---cccccccccccccccccCCC------CcCcccchHHHHHHHHHHHcC----------CCCCCCCCc
Q 047591         1481 IAKLLDGVDSM---KQTMTLATIGYMAPEYGSEG------IVSTSGDVYSFGILMMETLTR----------RKPTDDMFT 1541 (1624)
Q Consensus      1481 la~~~~~~~~~---~~~~~~gt~~y~APE~~~~~------~~~~k~DV~SfGvil~Elltg----------~~P~~~~~~ 1541 (1624)
                      +++........   ......||+.|+|||++.+.      .++.++|||||||++|||+||          +.||.....
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~  272 (342)
T 1b6c_B          193 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP  272 (342)
T ss_dssp             TCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred             CceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCc
Confidence            99877543321   22345799999999987665      345789999999999999999          667654322


Q ss_pred             cchhhhhhhhhcCChhHHHHH-hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1542 GEVCLKHWVEESLPDAVTDVI-DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1542 ~~~~l~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                      .......+         .+.+ ...+.......  .....++..+.+++.+||+.+|++|||+.||++.|+++..+.
T Consensus       273 ~~~~~~~~---------~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          273 SDPSVEEM---------RKVVCEQKLRPNIPNR--WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             SSCCHHHH---------HHHHTTSCCCCCCCGG--GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             CcccHHHH---------HHHHHHHHhCCCCccc--ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence            21111111         1111 11111111000  011245677899999999999999999999999999987653


No 141
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.7e-37  Score=375.66  Aligned_cols=248  Identities=21%  Similarity=0.298  Sum_probs=198.3

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc---hhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ---EDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKAL 1408 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~l 1408 (1624)
                      .++|...++||+|+||+||+|+.. +++.||||+++..   .....+.+.+|.++++.+ +||||+++++++.+++..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            467888899999999999999875 5889999998643   233456788999999988 79999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC
Q 047591         1409 ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      |||||++|+|.+++.+.+ .+++.++..|+.||+.||+|||+   .+|+||||||+|||++.++++||+|||+|+.....
T Consensus       102 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~  177 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN  177 (353)
T ss_dssp             EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred             EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence            999999999999997653 57899999999999999999996   79999999999999999999999999999864322


Q ss_pred             CCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1489 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                       .......+||+.|||||++.+..++.++|||||||++|||+||+.||......+ ...            .+......-
T Consensus       178 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~------------~i~~~~~~~  243 (353)
T 3txo_A          178 -GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-LFE------------AILNDEVVY  243 (353)
T ss_dssp             ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHH------------HHHHCCCCC
T ss_pred             -CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH-HHH------------HHHcCCCCC
Confidence             223345679999999999988889999999999999999999999997532211 111            111111100


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCH------HHHHH
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNV------KDALA 1608 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~------~evl~ 1608 (1624)
                       .        ......+.+++.+|++.+|++||++      +|+++
T Consensus       244 -p--------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          244 -P--------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             -C--------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             -C--------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence             0        1134457789999999999999998      66654


No 142
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.3e-37  Score=364.75  Aligned_cols=259  Identities=24%  Similarity=0.384  Sum_probs=206.4

Q ss_pred             CCcCCeEeecCceEEEEEEEcC-C---ceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCee-EEEE
Q 047591         1337 FSESNLLGTGIFSSVYKATFAD-G---TNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFK-ALIL 1410 (1624)
Q Consensus      1337 f~~~~~lG~G~~G~Vyk~~~~~-~---~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~-~lV~ 1410 (1624)
                      |...++||+|+||+||+|++.+ +   ..||+|++... .....+.|.+|++++++++||||+++++++.+.+.. ++||
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            3445789999999999998643 2   36999998643 334568899999999999999999999999776654 9999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC-
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD- 1489 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~- 1489 (1624)
                      ||+.+|+|.+++......+++.++..++.|++.||+|||+   .+|+||||||+||++++++.+||+|||+|+...... 
T Consensus       103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  179 (298)
T 3pls_A          103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY  179 (298)
T ss_dssp             CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred             ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence            9999999999998877778999999999999999999997   799999999999999999999999999998654322 


Q ss_pred             --CccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1490 --SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1490 --~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                        ........||+.|+|||...+..++.++|||||||++|||+||+.|+........ ....            +.....
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-~~~~------------~~~~~~  246 (298)
T 3pls_A          180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-LTHF------------LAQGRR  246 (298)
T ss_dssp             GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-HHHH------------HHTTCC
T ss_pred             cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-HHHH------------hhcCCC
Confidence              1122345688999999999999999999999999999999997666533222111 1111            111100


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      ...       +..++..+.+++.+||+.+|++|||++|+++.|+++...+.
T Consensus       247 ~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~  290 (298)
T 3pls_A          247 LPQ-------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL  290 (298)
T ss_dssp             CCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred             CCC-------CccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence            000       01234568899999999999999999999999999987754


No 143
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.4e-37  Score=361.85  Aligned_cols=257  Identities=22%  Similarity=0.365  Sum_probs=208.8

Q ss_pred             CCcCC-eEeecCceEEEEEEEc---CCceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1337 FSESN-LLGTGIFSSVYKATFA---DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1337 f~~~~-~lG~G~~G~Vyk~~~~---~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      |...+ .||+|+||+||+|++.   ++..||||+++.. .....+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus        11 ~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e   89 (287)
T 1u59_A           11 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVME   89 (287)
T ss_dssp             EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEE
T ss_pred             hhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEE
Confidence            33344 8999999999999864   5778999999754 344567899999999999999999999999 5567899999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCc
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      |+++|+|.+++......+++.++..++.|+++||+|||+   .+|+||||||+||+++.++.+||+|||+++........
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  166 (287)
T 1u59_A           90 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY  166 (287)
T ss_dssp             CCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred             eCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence            999999999998776779999999999999999999996   79999999999999999999999999999887543221


Q ss_pred             --cccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1492 --KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1492 --~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                        ......||+.|+|||...+..++.++|||||||++|||+| |+.||......+  ....            +......
T Consensus       167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~------------i~~~~~~  232 (287)
T 1u59_A          167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAF------------IEQGKRM  232 (287)
T ss_dssp             ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHH------------HHTTCCC
T ss_pred             eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHH------------HhcCCcC
Confidence              1223457899999999988889999999999999999999 999987543211  1111            1111000


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      ..       +..++..+.+++.+||+.+|++||++.|+++.|+++.....
T Consensus       233 ~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  275 (287)
T 1u59_A          233 EC-------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA  275 (287)
T ss_dssp             CC-------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             CC-------CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence            00       12345678899999999999999999999999999876543


No 144
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=1.6e-37  Score=377.77  Aligned_cols=251  Identities=21%  Similarity=0.315  Sum_probs=203.2

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++...  .....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e  108 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD  108 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            46788899999999999999875 5889999998643  23455789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCC---CcEEEeeecceeecCCC
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDD---MVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~---~~~kl~DFGla~~~~~~ 1488 (1624)
                      |+++|+|.+++... ..+++.++..++.||+.||+|||+   .+|+||||||+|||++.+   +.+||+|||+|+.....
T Consensus       109 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~  184 (362)
T 2bdw_A          109 LVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  184 (362)
T ss_dssp             CCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred             cCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence            99999999999754 457899999999999999999997   799999999999999865   45999999999876533


Q ss_pred             CCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1489 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                      .  ......||+.|+|||++.+..++.++|||||||++|||+||+.||.+....+ .....            .......
T Consensus       185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-~~~~i------------~~~~~~~  249 (362)
T 2bdw_A          185 E--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQI------------KAGAYDY  249 (362)
T ss_dssp             C--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH------------HHTCCCC
T ss_pred             c--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHH------------HhCCCCC
Confidence            2  2334579999999999998899999999999999999999999986532111 11111            0000000


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ..     ..+..++..+.+++.+|++.||++|||+.|+++.
T Consensus       250 ~~-----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          250 PS-----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             CT-----TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             Cc-----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            00     0012345667899999999999999999998754


No 145
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=5.1e-37  Score=375.78  Aligned_cols=252  Identities=22%  Similarity=0.262  Sum_probs=197.5

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKAL 1408 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~l 1408 (1624)
                      .++|...++||+|+||+||+|+.. +++.||||+++...   ....+.+.+|..+++++ +|||||++++++.+++..++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            356888899999999999999886 57889999986542   23345688999999887 89999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC
Q 047591         1409 ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      ||||+++|+|.+++.+.+ .+++..+..|+.||+.||+|||+   .+||||||||+|||++.++++||+|||+|+.....
T Consensus       131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~  206 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP  206 (396)
T ss_dssp             EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence            999999999999997653 57899999999999999999996   79999999999999999999999999999864322


Q ss_pred             CCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1489 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                      . ......+||+.|||||++.+..++.++|||||||++|||+||+.||......+....     ...+...+.+......
T Consensus       207 ~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~-----~~~~~~~~~i~~~~~~  280 (396)
T 4dc2_A          207 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-----NTEDYLFQVILEKQIR  280 (396)
T ss_dssp             T-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-----------CCHHHHHHHHHHCCCC
T ss_pred             C-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch-----hhHHHHHHHHhccccC
Confidence            2 233456899999999999999999999999999999999999999964321111000     0000111111111000


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCH
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNV 1603 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~ 1603 (1624)
                      -        +..++..+.+++.+|++.||++||++
T Consensus       281 ~--------p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          281 I--------PRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             C--------CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             C--------CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            0        01234567889999999999999995


No 146
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=7.3e-37  Score=365.82  Aligned_cols=273  Identities=21%  Similarity=0.301  Sum_probs=206.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC--eeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG--FKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~--~~~lV~ 1410 (1624)
                      +.|...++||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            45777889999999999999886 48899999987433 334577889999999999999999999987654  779999


Q ss_pred             EecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe----cCCCcEEEeeecceee
Q 047591         1411 QYMPQGSLEKWLYSHN--YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL----DDDMVAHLGDFGIAKL 1484 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl----d~~~~~kl~DFGla~~ 1484 (1624)
                      ||+++|+|.+++....  ..+++.++..|+.|++.||+|||+   .+|+||||||+|||+    +.++.+||+|||+|+.
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence            9999999999998643  338999999999999999999996   799999999999999    8888999999999998


Q ss_pred             cCCCCCccccccccccccccccccC--------CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccch---hhhhhhhhc
Q 047591         1485 LDGVDSMKQTMTLATIGYMAPEYGS--------EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEV---CLKHWVEES 1553 (1624)
Q Consensus      1485 ~~~~~~~~~~~~~gt~~y~APE~~~--------~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~---~l~~~~~~~ 1553 (1624)
                      .....  ......||+.|+|||++.        +..++.++|||||||++|||+||+.||........   .+.......
T Consensus       166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  243 (319)
T 4euu_A          166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (319)
T ss_dssp             CCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred             cCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence            75433  223457999999999865        57889999999999999999999999864322111   111111111


Q ss_pred             CChhHHH---HHhhhc--cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 047591         1554 LPDAVTD---VIDANL--LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKI 1613 (1624)
Q Consensus      1554 ~~~~~~~---~~d~~l--~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i 1613 (1624)
                      .+..+..   ......  .... .............+.+++.+|++.||++|||++|+++...+.
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          244 PSGAISGVQKAENGPIDWSGDM-PVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             CTTCCEEEECSTTCCEEEESSC-CTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             CcccchhhhcccCCccccCccC-CcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            0000000   000000  0000 000001134456788999999999999999999999987754


No 147
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=2.2e-37  Score=369.43  Aligned_cols=270  Identities=21%  Similarity=0.363  Sum_probs=215.4

Q ss_pred             cCHHHHHHHhCCCCcCCeEeecCceEEEEEEE------cCCceEEEEEeccch-hhHHHHHHHHHHHHHhc-CCCceeEE
Q 047591         1325 ISYQELRLATNGFSESNLLGTGIFSSVYKATF------ADGTNAAIKIFSLQE-DRALKSFDAECEVMRRI-RHRNLAKI 1396 (1624)
Q Consensus      1325 ~~~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~------~~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l-~HpNIv~l 1396 (1624)
                      ....+.....++|...+.||+|+||+||+|++      .+++.||||+++... ....+.+.+|+++++++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            34455666677899999999999999999975      245789999986532 34457899999999999 79999999


Q ss_pred             EeeeccCC-eeEEEEEecCCCCHHHHHHhcCC---------------CCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcC
Q 047591         1397 VSSCSNPG-FKALILQYMPQGSLEKWLYSHNY---------------LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460 (1624)
Q Consensus      1397 ~g~~~~~~-~~~lV~ey~~~gsL~~~l~~~~~---------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrD 1460 (1624)
                      +++|..++ ..++||||+++|+|.+++.....               .+++..+..++.|+++||+|||+   .+|+|||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~d  173 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD  173 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCccccc
Confidence            99987654 58999999999999999986543               27899999999999999999996   7999999


Q ss_pred             CCCCcEEecCCCcEEEeeecceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCC
Q 047591         1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDD 1538 (1624)
Q Consensus      1461 lK~~NILld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~ 1538 (1624)
                      |||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~  253 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  253 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence            999999999999999999999987643322 22334568999999999988899999999999999999999 9999875


Q ss_pred             CCccchhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1539 MFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1539 ~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                      ..........             +........       +..++..+.+++.+||+.+|++|||+.|+++.|+++....
T Consensus       254 ~~~~~~~~~~-------------~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          254 VKIDEEFCRR-------------LKEGTRMRA-------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             CCCSHHHHHH-------------HHHTCCCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHH-------------hccCccCCC-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            4322211111             111100000       0123456788999999999999999999999999987653


No 148
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.2e-37  Score=371.61  Aligned_cols=271  Identities=23%  Similarity=0.398  Sum_probs=213.6

Q ss_pred             CCCCcCCeEeecCceEEEEEEE-----cCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC--eeE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATF-----ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG--FKA 1407 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~-----~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~--~~~ 1407 (1624)
                      +.|...+.||+|+||.||+|++     .+++.||||++........+.|.+|++++++++||||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            3466678999999999999985     357889999997666666788999999999999999999999987654  679


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      +||||+++|+|.+++......+++.+++.++.|+++||+|||+   .+|+||||||+||+++.++.+||+|||+++....
T Consensus       121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~  197 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ  197 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred             EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence            9999999999999998877778999999999999999999996   7999999999999999999999999999988754


Q ss_pred             CCCc--cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCC-h----hHHH
Q 047591         1488 VDSM--KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLP-D----AVTD 1560 (1624)
Q Consensus      1488 ~~~~--~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~-~----~~~~ 1560 (1624)
                      ....  ......+|..|+|||...+..++.++|||||||++|||+||+.|+.....   ........... .    .+.+
T Consensus       198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  274 (326)
T 2w1i_A          198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMIGNDKQGQMIVFHLIE  274 (326)
T ss_dssp             SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH---HHHHHHCTTCCTHHHHHHHHH
T ss_pred             cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH---HHHHhhccccchhhhHHHHHH
Confidence            3221  12234578889999999888899999999999999999999998753210   00111100000 0    1111


Q ss_pred             HHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1561 VIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1561 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      .+.......       .+..++..+.+++.+||+.+|++|||+.|+++.|++++.++.
T Consensus       275 ~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~  325 (326)
T 2w1i_A          275 LLKNNGRLP-------RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA  325 (326)
T ss_dssp             HHHTTCCCC-------CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HhhcCCCCC-------CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence            111111000       012456778999999999999999999999999999988753


No 149
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=1.1e-37  Score=367.27  Aligned_cols=268  Identities=22%  Similarity=0.277  Sum_probs=200.6

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      ++|...+.||+|+||+||+|+..+|+.||||++....  ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            4577788999999999999998889999999986433  23347789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcc
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~ 1492 (1624)
                      +++ +|.+++......+++.++..++.|+++||+|||+   .+|+||||||+|||++.++.+||+|||+|+...... ..
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~  156 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RK  156 (288)
T ss_dssp             CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccc-cc
Confidence            985 9999998766678999999999999999999996   799999999999999999999999999998764322 12


Q ss_pred             ccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhh---hcCChhHHHH-----Hh
Q 047591         1493 QTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE---ESLPDAVTDV-----ID 1563 (1624)
Q Consensus      1493 ~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~---~~~~~~~~~~-----~d 1563 (1624)
                      .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||......+. +.....   ..........     .+
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRIFRILGTPNSKNWPNVTELPKYD  235 (288)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHHCCCChhhchhhhcccccc
Confidence            234578999999998765 4689999999999999999999999976432211 111110   0000000000     00


Q ss_pred             hhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1564 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      +................++..+.+++.+|++.||++|||++|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            000000000000000123456789999999999999999999986


No 150
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=7.8e-37  Score=360.99  Aligned_cols=265  Identities=16%  Similarity=0.213  Sum_probs=207.9

Q ss_pred             hCCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeee-ccCCeeEEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSC-SNPGFKALILQ 1411 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~-~~~~~~~lV~e 1411 (1624)
                      .++|...+.||+|+||+||+|+. .+++.||||++....  ..+.+.+|++++++++|++++..++++ .+.+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            46788899999999999999987 468899999875432  234688999999999999888777766 56778899999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe---cCCCcEEEeeecceeecCCC
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl---d~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      |+ +|+|.+++......+++.++..++.|++.||+|||+   .+|+||||||+|||+   ++++.+||+|||+|+.....
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~  161 (296)
T 4hgt_A           86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence            99 999999998766679999999999999999999996   799999999999999   78999999999999987543


Q ss_pred             CCc------cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHH
Q 047591         1489 DSM------KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVI 1562 (1624)
Q Consensus      1489 ~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1562 (1624)
                      ...      ......||+.|+|||...+..++.++|||||||++|||+||+.||.........          .....+.
T Consensus       162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----------~~~~~~~  231 (296)
T 4hgt_A          162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR----------QKYERIS  231 (296)
T ss_dssp             TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS----------SHHHHHH
T ss_pred             ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh----------hhhhhhh
Confidence            321      223457999999999999989999999999999999999999999764322110          0011111


Q ss_pred             hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1563 DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1563 d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      ........    ......++..+.+++.+||+.+|++|||++|+++.|+++..+..
T Consensus       232 ~~~~~~~~----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          232 EKKMSTPI----EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             HHHHHSCH----HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             cccccchh----hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence            11100000    00112345678899999999999999999999999999987654


No 151
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=2.3e-37  Score=372.44  Aligned_cols=267  Identities=22%  Similarity=0.359  Sum_probs=213.9

Q ss_pred             HHHHHhCCCCcCCeEeecCceEEEEEEEcC-C-----ceEEEEEeccch-hhHHHHHHHHHHHHHhc-CCCceeEEEeee
Q 047591         1329 ELRLATNGFSESNLLGTGIFSSVYKATFAD-G-----TNAAIKIFSLQE-DRALKSFDAECEVMRRI-RHRNLAKIVSSC 1400 (1624)
Q Consensus      1329 ~l~~at~~f~~~~~lG~G~~G~Vyk~~~~~-~-----~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~ 1400 (1624)
                      +++...++|...+.||+|+||+||+|+... +     ..||||++.... ....+.+.+|+++++++ +||||++++++|
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            344556788889999999999999998743 2     469999986442 34567899999999999 899999999999


Q ss_pred             ccCCeeEEEEEecCCCCHHHHHHhc-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEE
Q 047591         1401 SNPGFKALILQYMPQGSLEKWLYSH-------------NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVL 1467 (1624)
Q Consensus      1401 ~~~~~~~lV~ey~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NIL 1467 (1624)
                      .+.+..++||||+++|+|.+++...             ...+++..++.++.|++.||+|||+   .+|+||||||+|||
T Consensus       120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl  196 (333)
T 2i1m_A          120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVL  196 (333)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCE
T ss_pred             ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEE
Confidence            9999999999999999999999753             2357899999999999999999996   79999999999999


Q ss_pred             ecCCCcEEEeeecceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchh
Q 047591         1468 LDDDMVAHLGDFGIAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVC 1545 (1624)
Q Consensus      1468 ld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~ 1545 (1624)
                      ++.++.+||+|||+|+....... .......||+.|+|||...+..++.++|||||||++|||+| |+.||.+...... 
T Consensus       197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-  275 (333)
T 2i1m_A          197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-  275 (333)
T ss_dssp             EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-
T ss_pred             ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-
Confidence            99999999999999986643222 12234567889999999888889999999999999999999 8999875432211 


Q ss_pred             hhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1546 LKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1546 l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      ..            ..+........       +..++..+.+++.+||+.+|++|||+.|+++.|+++.....
T Consensus       276 ~~------------~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  329 (333)
T 2i1m_A          276 FY------------KLVKDGYQMAQ-------PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR  329 (333)
T ss_dssp             HH------------HHHHHTCCCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HH------------HHHhcCCCCCC-------CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence            11            11111111000       01234567889999999999999999999999999876644


No 152
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=2e-37  Score=385.84  Aligned_cols=253  Identities=21%  Similarity=0.290  Sum_probs=203.0

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      .+.|...+.||+|+||+||+|... +|+.+|+|++....  ....+.+.+|++++++++|||||++++++.+++..++||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            346778899999999999999874 68899999986432  345678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEec---CCCcEEEeeecceeecCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld---~~~~~kl~DFGla~~~~~ 1487 (1624)
                      |||++|+|.+++...+ .+++.++..++.||+.||+|||+   .+|+||||||+|||++   +++.+||+|||+|+....
T Consensus        90 E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~  165 (444)
T 3soa_A           90 DLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG  165 (444)
T ss_dssp             CCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred             EeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence            9999999999998654 58899999999999999999996   7999999999999998   467899999999987654


Q ss_pred             CCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1488 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      .. .......||++|||||++.+..++.++||||+||++|||++|+.||.+....+ .........            . 
T Consensus       166 ~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~------------~-  230 (444)
T 3soa_A          166 EQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR-LYQQIKAGA------------Y-  230 (444)
T ss_dssp             TC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTC------------C-
T ss_pred             CC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHhCC------------C-
Confidence            32 22334679999999999998899999999999999999999999996532111 111111100            0 


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ....    ..+..++..+.+++.+|++.||++|||+.|+++.
T Consensus       231 ~~~~----~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          231 DFPS----PEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             CCCT----TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCc----cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            0000    0012345568899999999999999999999873


No 153
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=4.4e-37  Score=369.35  Aligned_cols=249  Identities=24%  Similarity=0.352  Sum_probs=196.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC--------
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG-------- 1404 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~-------- 1404 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||+++++|.+.+        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            35777889999999999999986 78999999986433 345678999999999999999999999885433        


Q ss_pred             -------------------------------------------------eeEEEEEecCCCCHHHHHHhcC--CCCCHHH
Q 047591         1405 -------------------------------------------------FKALILQYMPQGSLEKWLYSHN--YLLNIEQ 1433 (1624)
Q Consensus      1405 -------------------------------------------------~~~lV~ey~~~gsL~~~l~~~~--~~l~~~~ 1433 (1624)
                                                                       ..++||||+++|+|.+++....  ...++..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  165 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV  165 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence                                                             3799999999999999998653  3457778


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC-----------cccccccccccc
Q 047591         1434 RLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS-----------MKQTMTLATIGY 1502 (1624)
Q Consensus      1434 ~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~-----------~~~~~~~gt~~y 1502 (1624)
                      +++++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+|+.......           .......||+.|
T Consensus       166 ~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  242 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY  242 (332)
T ss_dssp             HHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred             HHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence            89999999999999996   7999999999999999999999999999998754321           122345799999


Q ss_pred             ccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhH
Q 047591         1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCM 1582 (1624)
Q Consensus      1503 ~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 1582 (1624)
                      +|||++.+..++.++|||||||++|||+||..|+...    ....           .+....    ...    .......
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----~~~~-----------~~~~~~----~~~----~~~~~~~  299 (332)
T 3qd2_B          243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----VRII-----------TDVRNL----KFP----LLFTQKY  299 (332)
T ss_dssp             SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----HHHH-----------HHHHTT----CCC----HHHHHHC
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----HHHH-----------HHhhcc----CCC----cccccCC
Confidence            9999998889999999999999999999987764210    0000           000000    000    1112334


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1583 SSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1583 ~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ..+.+++.+||+.||++|||++|+++.
T Consensus       300 ~~~~~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          300 PQEHMMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence            566889999999999999999999863


No 154
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=3.4e-37  Score=364.75  Aligned_cols=259  Identities=24%  Similarity=0.401  Sum_probs=203.9

Q ss_pred             CCCcCCeEeecCceEEEEEEEcC----CceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeec-cCCeeEEE
Q 047591         1336 GFSESNLLGTGIFSSVYKATFAD----GTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCS-NPGFKALI 1409 (1624)
Q Consensus      1336 ~f~~~~~lG~G~~G~Vyk~~~~~----~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~-~~~~~~lV 1409 (1624)
                      .|...+.||+|+||+||+|++.+    ...+|||.+... .....+.|.+|++++++++||||++++++|. .++..++|
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  105 (298)
T 3f66_A           26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  105 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence            45667899999999999998743    235889988643 3445678999999999999999999999864 45678999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC
Q 047591         1410 LQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~ 1489 (1624)
                      |||+++|+|.++++.....+++.++..++.|++.||+|||+   .+|+||||||+||++++++.+||+|||+|+......
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  182 (298)
T 3f66_A          106 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  182 (298)
T ss_dssp             EECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred             EeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccccccccc
Confidence            99999999999998777778999999999999999999996   799999999999999999999999999998765432


Q ss_pred             C---ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCC-CCCCCCCccchhhhhhhhhcCChhHHHHHhhh
Q 047591         1490 S---MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRR-KPTDDMFTGEVCLKHWVEESLPDAVTDVIDAN 1565 (1624)
Q Consensus      1490 ~---~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~-~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 1565 (1624)
                      .   .......||+.|+|||...+..++.++|||||||++|||+||. .||......+. .......            .
T Consensus       183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~-~~~~~~~------------~  249 (298)
T 3f66_A          183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLLQG------------R  249 (298)
T ss_dssp             GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH-HHHHHTT------------C
T ss_pred             hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH-HHHHhcC------------C
Confidence            1   1223456788999999998889999999999999999999954 45543322111 1111110            0


Q ss_pred             ccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1566 LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1566 l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      ....        +..++..+.+++.+||+.+|++|||++|+++.|+++...+.
T Consensus       250 ~~~~--------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          250 RLLQ--------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             CCCC--------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             CCCC--------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            0000        01234568889999999999999999999999999877543


No 155
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=4.8e-38  Score=402.00  Aligned_cols=257  Identities=28%  Similarity=0.450  Sum_probs=209.5

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      ..++|...+.||+|+||+||+|++.++..||||+++... ...+.|.+|+++|++++|||||+++++|.+ +..++||||
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~  342 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  342 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence            345567778999999999999999888889999987433 235689999999999999999999999876 678999999


Q ss_pred             cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCc
Q 047591         1413 MPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      |++|+|.++++.. +..+++.++++|+.||++||+|||+   .+||||||||+|||+++++.+||+|||+++........
T Consensus       343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  419 (535)
T 2h8h_A          343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  419 (535)
T ss_dssp             CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred             hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence            9999999999753 3568999999999999999999996   79999999999999999999999999999876432222


Q ss_pred             cccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                      ......+|+.|||||++....++.++|||||||++|||+| |+.||.+....+.              .+.+....... 
T Consensus       420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~--------------~~~i~~~~~~~-  484 (535)
T 2h8h_A          420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP-  484 (535)
T ss_dssp             TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH--------------HHHHHTTCCCC-
T ss_pred             cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--------------HHHHHcCCCCC-
Confidence            2233457889999999988899999999999999999999 8999876432111              11111111000 


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKT 1615 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~ 1615 (1624)
                            .+..|+..+.+++.+||+.+|++|||++++++.|+++..
T Consensus       485 ------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          485 ------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             ------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             ------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence                  012456678899999999999999999999999987644


No 156
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=1.3e-36  Score=359.30  Aligned_cols=265  Identities=16%  Similarity=0.214  Sum_probs=210.0

Q ss_pred             hCCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeee-ccCCeeEEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSC-SNPGFKALILQ 1411 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~-~~~~~~~lV~e 1411 (1624)
                      .++|...+.||+|+||+||+|+. .+++.||||++.....  .+.+.+|++++++++|+++++.++++ .+.+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            46788889999999999999987 5789999999864332  34688999999999999877766665 56778899999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe---cCCCcEEEeeecceeecCCC
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl---d~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      |+ +|+|.+++......+++.++..++.|++.||+|||+   .+|+||||||+|||+   ++++.+||+|||+|+.....
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~  161 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence            99 999999998666679999999999999999999996   799999999999999   58899999999999887543


Q ss_pred             CCc------cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHH
Q 047591         1489 DSM------KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVI 1562 (1624)
Q Consensus      1489 ~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1562 (1624)
                      ...      ......||+.|+|||...+..++.++|||||||++|||+||+.||.........          .....+.
T Consensus       162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----------~~~~~~~  231 (296)
T 3uzp_A          162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR----------QKYERIS  231 (296)
T ss_dssp             TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS----------SHHHHHH
T ss_pred             ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh----------hhhhhhc
Confidence            321      123457999999999999989999999999999999999999999754221110          0001111


Q ss_pred             hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1563 DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1563 d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      ........    ......++..+.+++.+||+.+|++|||+.|+++.|+++..+..
T Consensus       232 ~~~~~~~~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  283 (296)
T 3uzp_A          232 EKKMSTPI----EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             HHHHHSCH----HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             ccccCCch----HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence            10000000    00112345678999999999999999999999999999877643


No 157
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=5.2e-39  Score=380.99  Aligned_cols=266  Identities=21%  Similarity=0.346  Sum_probs=188.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHh--cCCCceeEEEeeeccCC----eeEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRR--IRHRNLAKIVSSCSNPG----FKAL 1408 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~--l~HpNIv~l~g~~~~~~----~~~l 1408 (1624)
                      ++|...+.||+|+||+||+|++. ++.||||+++...   .+.+.+|.+++..  ++||||+++++++...+    ..++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l   78 (303)
T 3gxj_A            3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred             ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence            46788899999999999999874 8899999986432   3567788888887  79999999999998766    7899


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCceEEcCCCCCcEEecCCCcEEEeeeccee
Q 047591         1409 ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-----YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK 1483 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~-----~~~~iiHrDlK~~NILld~~~~~kl~DFGla~ 1483 (1624)
                      ||||+++|+|.+++.+.  .+++.++.+++.|++.||+|||..     +..+|+||||||+|||++.++.+||+|||+|+
T Consensus        79 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~  156 (303)
T 3gxj_A           79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             EEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred             EEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence            99999999999999764  467888999999999999999921     13899999999999999999999999999998


Q ss_pred             ecCCCCCc---cccccccccccccccccCCC------CcCcccchHHHHHHHHHHHcC----------CCCCCCCCccch
Q 047591         1484 LLDGVDSM---KQTMTLATIGYMAPEYGSEG------IVSTSGDVYSFGILMMETLTR----------RKPTDDMFTGEV 1544 (1624)
Q Consensus      1484 ~~~~~~~~---~~~~~~gt~~y~APE~~~~~------~~~~k~DV~SfGvil~Elltg----------~~P~~~~~~~~~ 1544 (1624)
                      ........   ......||+.|+|||++.+.      .++.++|||||||++|||+||          +.||........
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~  236 (303)
T 3gxj_A          157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred             eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence            76543322   12234799999999988765      455789999999999999999          555543221111


Q ss_pred             hhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1545 CLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1545 ~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      ..        ......+............  .....++..+.+++.+||+.||++|||++|+++.|+++..+
T Consensus       237 ~~--------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~  298 (303)
T 3gxj_A          237 SV--------EEMRKVVCEQKLRPNIPNR--WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CC--------C-CHHHHTTSCCCCCCCGG--GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred             cH--------HHHHHHHHHhhcCCCcccc--ccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence            00        0011111111111111110  00124566789999999999999999999999999987543


No 158
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=3.5e-37  Score=363.63  Aligned_cols=270  Identities=19%  Similarity=0.239  Sum_probs=202.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++....  ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            46777889999999999999885 58899999986432  3345788999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCc
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      |+++ ++.+++......+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+...... .
T Consensus        82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  156 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-R  156 (292)
T ss_dssp             CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-S
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-c
Confidence            9985 6777776666678999999999999999999997   799999999999999999999999999998765322 2


Q ss_pred             cccccccccccccccccCCCC-cCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhc---CChhHHHHHh---h
Q 047591         1492 KQTMTLATIGYMAPEYGSEGI-VSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEES---LPDAVTDVID---A 1564 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~~~-~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~---~~~~~~~~~d---~ 1564 (1624)
                      ......||+.|+|||++.+.. ++.++|||||||++|||+||+.|+.........+.......   ..+.+....+   .
T Consensus       157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  236 (292)
T 3o0g_A          157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY  236 (292)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred             cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccc
Confidence            234457899999999887655 89999999999999999999998643322222222211100   0000000000   0


Q ss_pred             hccCCc--hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1565 NLLSGE--EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1565 ~l~~~~--~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ......  ..........+...+.+++.+|++.||++|||++|+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            000000  000000011244567899999999999999999999863


No 159
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.1e-37  Score=371.60  Aligned_cols=257  Identities=22%  Similarity=0.361  Sum_probs=196.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccc---hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCe----e
Q 047591         1335 NGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGF----K 1406 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~----~ 1406 (1624)
                      +.|...+.||+|+||+||+|+. .+++.||||+++..   .....+.|.+|++++++++||||+++++++...+.    .
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~   91 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   91 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence            5678889999999999999987 46889999999653   23445789999999999999999999999865443    4


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecC
Q 047591         1407 ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~ 1486 (1624)
                      ++||||+++|+|.++++..+ .+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+...
T Consensus        92 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~  167 (311)
T 3ork_A           92 YIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIA  167 (311)
T ss_dssp             EEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred             EEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence            99999999999999997654 57999999999999999999996   799999999999999999999999999998765


Q ss_pred             CCCC--ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhh
Q 047591         1487 GVDS--MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDA 1564 (1624)
Q Consensus      1487 ~~~~--~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 1564 (1624)
                      ....  .......||+.|+|||++.+..++.++|||||||++|||+||+.||.......... ........         
T Consensus       168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-~~~~~~~~---------  237 (311)
T 3ork_A          168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY-QHVREDPI---------  237 (311)
T ss_dssp             --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHCCCC---------
T ss_pred             ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhcCCCC---------
Confidence            3321  12233569999999999988899999999999999999999999997543221111 11111000         


Q ss_pred             hccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHH-HHHHHH
Q 047591         1565 NLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDAL-ANLKKI 1613 (1624)
Q Consensus      1565 ~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl-~~L~~i 1613 (1624)
                           .   .......++..+.+++.+||+.||++||+..+++ ..+.++
T Consensus       238 -----~---~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          238 -----P---PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             -----C---HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             -----C---cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence                 0   0011123456788999999999999999766655 445444


No 160
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00  E-value=3e-36  Score=379.99  Aligned_cols=346  Identities=26%  Similarity=0.385  Sum_probs=185.3

Q ss_pred             CCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCcccc
Q 047591          111 NLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKR  190 (1624)
Q Consensus       111 ~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~  190 (1624)
                      .+++|+.|++++|.++ .+|. +..+++|++|||++|.+++. ++  +.++++|++|++++|++++..|  ++++++|++
T Consensus        44 ~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~  116 (466)
T 1o6v_A           44 DLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG  116 (466)
T ss_dssp             HHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred             HhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence            4566777777777776 3553 66677777777777777642 32  4566666666666666664333  666666666


Q ss_pred             cccccccccccccCcccccccccceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEeeccccc
Q 047591          191 LSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCM  270 (1624)
Q Consensus       191 L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~  270 (1624)
                      |+|++|++++. |. ++++++|++|+|++|++++ +| .+.++++|++|+++ |.+.                       
T Consensus       117 L~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~-----------------------  168 (466)
T 1o6v_A          117 LTLFNNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVT-----------------------  168 (466)
T ss_dssp             EECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCC-----------------------
T ss_pred             EECCCCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-Cccc-----------------------
Confidence            66666666643 22 5666666666666666653 22 24455555555553 2332                       


Q ss_pred             ccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCC
Q 047591          271 TTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGN  350 (1624)
Q Consensus       271 l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N  350 (1624)
                        +..|  ++++++|+.|++++|++.++         + .+.++.+|+.|++++|++++..|  + ..+++|++|++++|
T Consensus       169 --~~~~--~~~l~~L~~L~l~~n~l~~~---------~-~l~~l~~L~~L~l~~n~l~~~~~--~-~~l~~L~~L~l~~n  231 (466)
T 1o6v_A          169 --DLKP--LANLTTLERLDISSNKVSDI---------S-VLAKLTNLESLIATNNQISDITP--L-GILTNLDELSLNGN  231 (466)
T ss_dssp             --CCGG--GTTCTTCCEEECCSSCCCCC---------G-GGGGCTTCSEEECCSSCCCCCGG--G-GGCTTCCEEECCSS
T ss_pred             --Cchh--hccCCCCCEEECcCCcCCCC---------h-hhccCCCCCEEEecCCccccccc--c-cccCCCCEEECCCC
Confidence              2211  44555555555555544332         1 13344445555555555544333  1 23555666666666


Q ss_pred             ccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEccccccccCCCCCCcccccccccccccceeeeccCC
Q 047591          351 NLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNP  430 (1624)
Q Consensus       351 ~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~  430 (1624)
                      ++++.  ..+..+++|++|++++|.+++..+  +..+++|++|+|++|+++.                            
T Consensus       232 ~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~----------------------------  279 (466)
T 1o6v_A          232 QLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN----------------------------  279 (466)
T ss_dssp             CCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC----------------------------
T ss_pred             Ccccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCc----------------------------
Confidence            55542  245555666666666666655544  4555555555555444421                            


Q ss_pred             CCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEeccCCccCCCccchhccccccceecccccccccCCCc
Q 047591          431 WKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPS  510 (1624)
Q Consensus       431 ~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~  510 (1624)
                                                  ..|  +..+++|++|+|++|++++..|  ++.+++|+.|+|++|++++..| 
T Consensus       280 ----------------------------~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-  326 (466)
T 1o6v_A          280 ----------------------------ISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-  326 (466)
T ss_dssp             ----------------------------CGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-
T ss_pred             ----------------------------ccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-
Confidence                                        111  3344455555555555554322  4455555555555555554433 


Q ss_pred             cccCCCCCceeecccccccCCCccccccccCCccccccCccccccCchhhccccccceeecccccccC
Q 047591          511 ELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSG  578 (1624)
Q Consensus       511 ~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g  578 (1624)
                       +..+++|+.|++++|++++.  ..++++++|+.|++++|++++.+|  +..+++|+.|++++|.+++
T Consensus       327 -~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~  389 (466)
T 1o6v_A          327 -VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN  389 (466)
T ss_dssp             -GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred             -hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence             44555555555555555542  345555555555555555555444  5555555555555555554


No 161
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=2.5e-37  Score=374.48  Aligned_cols=250  Identities=23%  Similarity=0.285  Sum_probs=188.1

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      .+.|...+.||+|+||+||+|+.. +++.||||+++...  ..+.+.+|++++++++||||++++++|.+.+..++||||
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  129 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL  129 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence            456888899999999999999886 47889999986433  346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC---CCcEEEeeecceeecCCCC
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~---~~~~kl~DFGla~~~~~~~ 1489 (1624)
                      +++|+|.+++... ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.   ++.+||+|||+++......
T Consensus       130 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~  205 (349)
T 2w4o_A          130 VTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV  205 (349)
T ss_dssp             CCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence            9999999999764 358899999999999999999996   79999999999999975   8899999999998764322


Q ss_pred             CccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1490 SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1490 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                        ......||+.|+|||++.+..++.++|||||||++|||+||+.||.+...............            ....
T Consensus       206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~------------~~~~  271 (349)
T 2w4o_A          206 --LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE------------YYFI  271 (349)
T ss_dssp             ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC------------CCCC
T ss_pred             --ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC------------CccC
Confidence              22345799999999999988999999999999999999999999965432221111111111            0000


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      .     .....++..+.+++.+|++.||++|||+.|+++
T Consensus       272 ~-----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          272 S-----PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             T-----TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             C-----chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0     001123456788999999999999999999987


No 162
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.7e-37  Score=370.77  Aligned_cols=258  Identities=25%  Similarity=0.411  Sum_probs=201.3

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCce----EEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTN----AAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~----vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      .++|...+.||+|+||+||+|++. +++.    ||+|.+... .....+.|.+|++++++++||||++++++|.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            356888899999999999999874 4554    466666432 2345678999999999999999999999998654 78


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      +||||+++|+|.+++......+++..++.|+.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+....
T Consensus        93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~  169 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  169 (327)
T ss_dssp             EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence            9999999999999999877789999999999999999999996   7999999999999999999999999999987643


Q ss_pred             CCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhh
Q 047591         1488 VDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDAN 1565 (1624)
Q Consensus      1488 ~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 1565 (1624)
                      ... .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+.              .+.+...
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--------------~~~~~~~  235 (327)
T 3lzb_A          170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--------------SSILEKG  235 (327)
T ss_dssp             ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--------------HHHHHTT
T ss_pred             ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--------------HHHHHcC
Confidence            322 22233457889999999988899999999999999999999 9999976432211              1111111


Q ss_pred             ccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1566 LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1566 l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      .....       +..++..+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus       236 ~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          236 ERLPQ-------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             CCCCC-------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             CCCCC-------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            10000       112455688899999999999999999999999998643


No 163
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=1.4e-36  Score=373.89  Aligned_cols=271  Identities=17%  Similarity=0.259  Sum_probs=204.1

Q ss_pred             CCCCcCCeEeec--CceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1335 NGFSESNLLGTG--IFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1335 ~~f~~~~~lG~G--~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      ++|...+.||+|  +||+||+|+.. +++.||||+++...  ....+.+.+|++++++++|||||++++++.+++..++|
T Consensus        25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  104 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV  104 (389)
T ss_dssp             GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence            457778899999  99999999886 68999999986543  34567889999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC
Q 047591         1410 LQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      ||||++|+|.+++... ...+++..+..|+.||+.||+|||+   .+|+||||||+|||++.++.+||+|||.+......
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~  181 (389)
T 3gni_B          105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH  181 (389)
T ss_dssp             EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred             EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence            9999999999999864 3568999999999999999999996   79999999999999999999999999998754321


Q ss_pred             CC------ccccccccccccccccccCC--CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHH-
Q 047591         1489 DS------MKQTMTLATIGYMAPEYGSE--GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVT- 1559 (1624)
Q Consensus      1489 ~~------~~~~~~~gt~~y~APE~~~~--~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~- 1559 (1624)
                      ..      .......||+.|+|||++.+  ..++.++|||||||++|||+||+.||.+.......... .....+.... 
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~  260 (389)
T 3gni_B          182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK-LNGTVPCLLDT  260 (389)
T ss_dssp             TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred             cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-hcCCCCccccc
Confidence            11      11223478999999999877  67999999999999999999999999764332221111 1111100000 


Q ss_pred             -----HH-------------Hhhhcc------CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1560 -----DV-------------IDANLL------SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1560 -----~~-------------~d~~l~------~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                           +.             ......      .............++..+.+++.+||+.||++|||++|+++.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence                 00             000000      000000111223456778999999999999999999999864


No 164
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=7.6e-37  Score=365.30  Aligned_cols=270  Identities=23%  Similarity=0.320  Sum_probs=190.4

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            356778899999999999999875 58899999986543 2345678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecC
Q 047591         1412 YMPQGSLEKWLYSHN-----YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~ 1486 (1624)
                      |++ |+|.+++....     ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+|+...
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 69999987532     358899999999999999999996   799999999999999999999999999998765


Q ss_pred             CCCCccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhh--cCCh-hHHHHH
Q 047591         1487 GVDSMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE--SLPD-AVTDVI 1562 (1624)
Q Consensus      1487 ~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~--~~~~-~~~~~~ 1562 (1624)
                      ... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||......+ .+......  ..++ .+..+.
T Consensus       160 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~  237 (317)
T 2pmi_A          160 IPV-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPSVT  237 (317)
T ss_dssp             SCC-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGGGG
T ss_pred             CCc-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhhhh
Confidence            322 12234578999999998865 468999999999999999999999997543221 11111100  0000 000000


Q ss_pred             h-----hhccCC----chH-HHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1563 D-----ANLLSG----EEE-ADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1563 d-----~~l~~~----~~~-~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .     ......    ... .........+..+.+++.+|++.||++|||++|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence            0     000000    000 0000001234578899999999999999999999863


No 165
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=3.6e-37  Score=394.34  Aligned_cols=200  Identities=25%  Similarity=0.375  Sum_probs=180.6

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      .++|...+.||+|+||+||+|+. .+|+.||||++........+.+.+|+++|++++|||||++++++.+++..|+||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            46789999999999999999986 47999999999766555567889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCC--CceEEEeeeeeeccCCCCC
Q 047591          822 MPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDD--TVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~--~~~kl~DFGla~~~~~~~~  899 (1624)
                      |++|+|.++|......+++.++..|+.||+.||+|||+.   +|+||||||+|||++.+  +.+||+|||+|+.+.....
T Consensus       236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~  312 (573)
T 3uto_A          236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  312 (573)
T ss_dssp             CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred             cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence            999999999976666799999999999999999999995   59999999999999854  7999999999998765432


Q ss_pred             cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                        ....+||+.|||||++.+..|+.++||||+||++|||++|+.||..
T Consensus       313 --~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~  358 (573)
T 3uto_A          313 --VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG  358 (573)
T ss_dssp             --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             --eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence              2345799999999999999999999999999999999999999865


No 166
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=3.3e-37  Score=371.76  Aligned_cols=250  Identities=25%  Similarity=0.318  Sum_probs=202.0

Q ss_pred             HHHhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCe
Q 047591         1331 RLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGF 1405 (1624)
Q Consensus      1331 ~~at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~ 1405 (1624)
                      ....++|...++||+|+||+||+|+.. +|+.||||+++...   ....+.+.+|.++++.+ +||||+++++++.+.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            345678889999999999999999886 58899999986432   23456788999999987 99999999999999999


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeec
Q 047591         1406 KALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL 1485 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~ 1485 (1624)
                      .++||||+++|+|.+++.+.+ .+++.++..++.||+.||+|||+   .+|+||||||+|||++.++++||+|||+|+..
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence            999999999999999997643 57899999999999999999996   79999999999999999999999999999865


Q ss_pred             CCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhh
Q 047591         1486 DGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDAN 1565 (1624)
Q Consensus      1486 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 1565 (1624)
                      .... ......+||+.|+|||++.+..++.++|||||||++|||+||+.||......+. ...            +....
T Consensus       169 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~------------i~~~~  234 (345)
T 1xjd_A          169 MLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL-FHS------------IRMDN  234 (345)
T ss_dssp             CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH------------HHHCC
T ss_pred             ccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH-HHH------------HHhCC
Confidence            3222 223456799999999999988999999999999999999999999975321110 110            11000


Q ss_pred             ccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHH-HHH
Q 047591         1566 LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVK-DAL 1607 (1624)
Q Consensus      1566 l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~-evl 1607 (1624)
                      .. -        +..++..+.+++.+|++.+|++||++. |+.
T Consensus       235 ~~-~--------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          235 PF-Y--------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             CC-C--------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             CC-C--------CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            00 0        012345678899999999999999997 554


No 167
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=1.9e-37  Score=372.52  Aligned_cols=246  Identities=24%  Similarity=0.398  Sum_probs=199.8

Q ss_pred             CCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+. .+++.||||++....   ....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4677789999999999999987 468899999986432   223467899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+ +|+|.+++.+.+ .+++.++..++.|++.||+|||+   .+|+||||||+|||+++++.+||+|||+|+...... 
T Consensus        89 E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-  162 (336)
T 3h4j_B           89 EYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-  162 (336)
T ss_dssp             CCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB-
T ss_pred             ECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc-
Confidence            999 789999987653 58899999999999999999997   789999999999999999999999999998765432 


Q ss_pred             ccccccccccccccccccCCCCc-CcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~-~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                       .....+||+.|+|||.+.+..+ +.++|||||||++|||+||+.||++....... .. +...            ....
T Consensus       163 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-~~-i~~~------------~~~~  227 (336)
T 3h4j_B          163 -FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-KK-VNSC------------VYVM  227 (336)
T ss_dssp             -TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-CC-CCSS------------CCCC
T ss_pred             -ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-HH-HHcC------------CCCC
Confidence             2234579999999999887766 78999999999999999999999753221110 00 0000            0000


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                              +..++..+.+++.+|++.||++|||++|+++.
T Consensus       228 --------p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          228 --------PDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             --------CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             --------cccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence                    01123457789999999999999999999763


No 168
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=5.3e-37  Score=371.12  Aligned_cols=245  Identities=27%  Similarity=0.367  Sum_probs=199.9

Q ss_pred             CCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccc---hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1336 GFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1336 ~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      .|...+.||+|+||+||+|+. .+++.||||++...   .....+.|.+|++++++++|||||++++++.+++..++|||
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  134 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME  134 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence            367778999999999999987 46889999998643   33445789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCc
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      |++ |++.+++......+++.++..++.|+++||+|||+   .+|+||||||+|||+++++.+||+|||+|+.....   
T Consensus       135 ~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~---  207 (348)
T 1u5q_A          135 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---  207 (348)
T ss_dssp             CCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred             cCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence            997 78999887666778999999999999999999997   78999999999999999999999999999876432   


Q ss_pred             ccccccccccccccccc---CCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1492 KQTMTLATIGYMAPEYG---SEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~---~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                        ....||+.|+|||++   ..+.++.++|||||||++|||+||+.||....... .+........+         ....
T Consensus       208 --~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~---------~~~~  275 (348)
T 1u5q_A          208 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESP---------ALQS  275 (348)
T ss_dssp             --CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCC---------CCCC
T ss_pred             --CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCC---------CCCC
Confidence              235799999999987   35779999999999999999999999986532211 11111111000         0000


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                                ..++..+.+++.+||+.+|++|||++|+++.
T Consensus       276 ----------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          276 ----------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             ----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             ----------CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence                      1234567889999999999999999999863


No 169
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=1.2e-36  Score=371.36  Aligned_cols=249  Identities=24%  Similarity=0.328  Sum_probs=200.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||+|++....   ....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            45777889999999999999876 57889999986432   234578899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++|+|.+++... ..+++..+..|+.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+|+.+.... 
T Consensus        95 e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-  169 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET-  169 (384)
T ss_dssp             CCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred             ecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCCC-
Confidence            999999999999764 458899999999999999999996   799999999999999999999999999999875332 


Q ss_pred             ccccccccccccccccccCC---CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1491 MKQTMTLATIGYMAPEYGSE---GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~---~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                       ......||+.|||||++..   ..++.++|||||||++|||+||+.||........  ..         ....+.....
T Consensus       170 -~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~--~~---------~~~~~~~~~~  237 (384)
T 4fr4_A          170 -QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS--KE---------IVHTFETTVV  237 (384)
T ss_dssp             -CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH--HH---------HHHHHHHCCC
T ss_pred             -ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH--HH---------HHHHHhhccc
Confidence             3345679999999998763   4589999999999999999999999964322111  00         0011111111


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMN-VKDALA 1608 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt-~~evl~ 1608 (1624)
                      ...        ..++..+.+++.+|++.+|++||+ ++++.+
T Consensus       238 ~~p--------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          238 TYP--------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             CCC--------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             CCC--------CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            100        123456788999999999999998 666653


No 170
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=2e-37  Score=374.92  Aligned_cols=261  Identities=16%  Similarity=0.185  Sum_probs=199.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc----CCceEEEEEeccchhh-----------HHHHHHHHHHHHHhcCCCceeEEEee
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA----DGTNAAIKIFSLQEDR-----------ALKSFDAECEVMRRIRHRNLAKIVSS 1399 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~----~~~~vAvK~~~~~~~~-----------~~~~f~~E~~~l~~l~HpNIv~l~g~ 1399 (1624)
                      ++|...+.||+|+||+||+|+..    ++..||||++......           ..+.+.+|+.+++.++||||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            56777889999999999999885    5678999988643211           12357789999999999999999999


Q ss_pred             ecc----CCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCC--c
Q 047591         1400 CSN----PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDM--V 1473 (1624)
Q Consensus      1400 ~~~----~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~--~ 1473 (1624)
                      +..    ....++||||+ +|+|.+++...+ .+++.+++.|+.||+.||+|||+   .+|+||||||+|||++.++  .
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~  191 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQ  191 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTTS
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCCc
Confidence            877    67889999999 999999997654 78999999999999999999996   7999999999999999887  9


Q ss_pred             EEEeeecceeecCCCCC------ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhh
Q 047591         1474 AHLGDFGIAKLLDGVDS------MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547 (1624)
Q Consensus      1474 ~kl~DFGla~~~~~~~~------~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~ 1547 (1624)
                      +||+|||+|+.+.....      .......||+.|+|||+..+..++.++|||||||++|||+||+.||...........
T Consensus       192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~  271 (345)
T 2v62_A          192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ  271 (345)
T ss_dssp             EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred             EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence            99999999987643221      111345799999999999888999999999999999999999999964322221111


Q ss_pred             hhh---hhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 047591         1548 HWV---EESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIK 1614 (1624)
Q Consensus      1548 ~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~ 1614 (1624)
                      ...   ....++...+.    ..          ...++..+.+++.+||+.+|++|||++|+++.|+++.
T Consensus       272 ~~~~~~~~~~~~~~~~~----~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          272 TAKTNLLDELPQSVLKW----AP----------SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHHHTTTHHHHHH----SC----------TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHhhcccccHHHHhh----cc----------ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            111   01111111000    00          0134567899999999999999999999999998653


No 171
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-36  Score=363.45  Aligned_cols=244  Identities=26%  Similarity=0.311  Sum_probs=201.8

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||+|+++...   ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            46777899999999999999875 68999999986432   234567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++|+|.+++...+ .+++..+..++.||+.||+|||+   .+|+||||||+|||++.++++||+|||+|+.....  
T Consensus        86 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--  159 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--  159 (318)
T ss_dssp             CCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred             eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCc--
Confidence            9999999999998653 57889999999999999999995   79999999999999999999999999999876432  


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                        ....+||+.|||||++.+..++.++|||||||++|||++|+.||.+..... ..            ..++.....- .
T Consensus       160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~------------~~i~~~~~~~-p  223 (318)
T 1fot_A          160 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-TY------------EKILNAELRF-P  223 (318)
T ss_dssp             --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HH------------HHHHHCCCCC-C
T ss_pred             --cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-HH------------HHHHhCCCCC-C
Confidence              234579999999999999999999999999999999999999996532111 11            1111111100 0


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERM-----NVKDALA 1608 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----t~~evl~ 1608 (1624)
                              ...+..+.+++.+|++.+|++||     +++|+++
T Consensus       224 --------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          224 --------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             --------TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             --------CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence                    12335678899999999999999     8888875


No 172
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=5.7e-37  Score=366.09  Aligned_cols=263  Identities=20%  Similarity=0.249  Sum_probs=197.9

Q ss_pred             CCCc-CCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeEEEEEe
Q 047591         1336 GFSE-SNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1336 ~f~~-~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      .|.. .++||+|+||+||+|+.. +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||||
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   92 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK   92 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence            4554 368999999999999864 6889999999765555567899999999995 799999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc---EEEeeecceeecCCCC
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV---AHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~---~kl~DFGla~~~~~~~ 1489 (1624)
                      +++|+|.+++...+ .+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.   +||+|||+++......
T Consensus        93 ~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~  168 (316)
T 2ac3_A           93 MRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG  168 (316)
T ss_dssp             CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred             CCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence            99999999997653 57899999999999999999997   79999999999999998776   9999999998654221


Q ss_pred             C------ccccccccccccccccccCC-----CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCCh--
Q 047591         1490 S------MKQTMTLATIGYMAPEYGSE-----GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPD-- 1556 (1624)
Q Consensus      1490 ~------~~~~~~~gt~~y~APE~~~~-----~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~-- 1556 (1624)
                      .      .......||+.|+|||++..     ..++.++|||||||++|||+||+.||......+.   .|.......  
T Consensus       169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~  245 (316)
T 2ac3_A          169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC---GWDRGEACPAC  245 (316)
T ss_dssp             -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCS---CC----CCHHH
T ss_pred             ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccc---cccccccchhH
Confidence            1      11223469999999998764     5689999999999999999999999975432211   111111100  


Q ss_pred             --hHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1557 --AVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1557 --~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                        ...+.+........    ......++..+.+++.+|++.||++|||++|+++.
T Consensus       246 ~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          246 QNMLFESIQEGKYEFP----DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHHHHCCCCCC----HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHhccCcccC----chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence              01111111111111    11122356678899999999999999999999873


No 173
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=8e-37  Score=371.96  Aligned_cols=280  Identities=23%  Similarity=0.252  Sum_probs=214.7

Q ss_pred             chhccccCHHHHHHHhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcC-----CCc
Q 047591         1319 TAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIR-----HRN 1392 (1624)
Q Consensus      1319 ~~~~~~~~~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~-----HpN 1392 (1624)
                      ......+++.+.....++|...+.||+|+||+||+|+.. +++.||||+++.. ....+.+..|++++++++     |||
T Consensus        19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~   97 (360)
T 3llt_A           19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNN   97 (360)
T ss_dssp             -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred             CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCC
Confidence            345677888888888899999999999999999999884 6889999998632 344567788999999997     999


Q ss_pred             eeEEEeeeccCCeeEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC-
Q 047591         1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD- 1470 (1624)
Q Consensus      1393 Iv~l~g~~~~~~~~~lV~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~- 1470 (1624)
                      ||++++++...+..++||||+ +|+|.+++.... ..+++.++..|+.||+.||+|||+   .+|+||||||+|||++. 
T Consensus        98 iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~  173 (360)
T 3llt_A           98 IVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDP  173 (360)
T ss_dssp             BCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCT
T ss_pred             eecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccc
Confidence            999999999999999999999 999999998654 458999999999999999999996   79999999999999986 


Q ss_pred             ------------------------CCcEEEeeecceeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHH
Q 047591         1471 ------------------------DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526 (1624)
Q Consensus      1471 ------------------------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil 1526 (1624)
                                              ++.+||+|||+|+.....    .....||+.|+|||++.+..++.++|||||||++
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  249 (360)
T 3llt_A          174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL  249 (360)
T ss_dssp             TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred             cccccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence                                    789999999999875432    2345799999999999999999999999999999


Q ss_pred             HHHHcCCCCCCCCCccchhhhhh--hhhcCChhHH-HHHhhhc---------c---C-Cch-HHHHH--------HHHHh
Q 047591         1527 METLTRRKPTDDMFTGEVCLKHW--VEESLPDAVT-DVIDANL---------L---S-GEE-EADIA--------AKKKC 1581 (1624)
Q Consensus      1527 ~Elltg~~P~~~~~~~~~~l~~~--~~~~~~~~~~-~~~d~~l---------~---~-~~~-~~~~~--------~~~~~ 1581 (1624)
                      |||+||+.||......+ .+...  .....+.... +......         .   . ... .....        .....
T Consensus       250 ~ell~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  328 (360)
T 3llt_A          250 AELYTGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIK  328 (360)
T ss_dssp             HHHHHSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCC
T ss_pred             HHHHHCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccch
Confidence            99999999997532211 11111  1111121111 1000000         0   0 000 00000        00112


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1582 MSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1582 ~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      ...+.+++.+|++.||++|||++|+++
T Consensus       329 ~~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          329 HELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            256789999999999999999999975


No 174
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=1.7e-36  Score=366.19  Aligned_cols=251  Identities=23%  Similarity=0.273  Sum_probs=198.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc---hhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ---EDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||+++..   .....+.+.+|..+++++ +|||||++++++.+.+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            45777889999999999999886 5788999998643   234457788999999988 899999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC
Q 047591         1410 LQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~ 1489 (1624)
                      |||+++|+|.+++...+ .+++..+..++.||+.||+|||+   .+|+||||||+|||++.++++||+|||+|+......
T Consensus        89 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~  164 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  164 (345)
T ss_dssp             ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred             EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence            99999999999997643 57899999999999999999996   799999999999999999999999999998643222


Q ss_pred             CccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1490 SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1490 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                       ......+||+.|+|||++.+..++.++|||||||++|||+||+.||..........     ....+.....+......-
T Consensus       165 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~  238 (345)
T 3a8x_A          165 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD-----QNTEDYLFQVILEKQIRI  238 (345)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC------------CHHHHHHHHHHCCCCC
T ss_pred             -CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccc-----cccHHHHHHHHHcCCCCC
Confidence             22344679999999999998899999999999999999999999996432111000     000001111111110000


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNV 1603 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~ 1603 (1624)
                              +...+..+.+++.+|++.||++||++
T Consensus       239 --------p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          239 --------PRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             --------CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             --------CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence                    01234567889999999999999995


No 175
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1e-37  Score=373.61  Aligned_cols=265  Identities=24%  Similarity=0.409  Sum_probs=212.6

Q ss_pred             HHHHHHHhCCCCcCCeEeecCceEEEEEEEc------CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEee
Q 047591         1327 YQELRLATNGFSESNLLGTGIFSSVYKATFA------DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSS 1399 (1624)
Q Consensus      1327 ~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~------~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~ 1399 (1624)
                      .++++...++|...+.||+|+||+||+|++.      +++.||||++.... ......|.+|++++++++||||++++++
T Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   96 (322)
T 1p4o_A           17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV   96 (322)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred             hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence            3445556678888999999999999999764      36789999986432 3445679999999999999999999999


Q ss_pred             eccCCeeEEEEEecCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC
Q 047591         1400 CSNPGFKALILQYMPQGSLEKWLYSHN---------YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD 1470 (1624)
Q Consensus      1400 ~~~~~~~~lV~ey~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~ 1470 (1624)
                      +.+.+..++||||+++|+|.+++...+         ..+++..+++++.|++.||+|||+   .+|+||||||+||+++.
T Consensus        97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~  173 (322)
T 1p4o_A           97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAE  173 (322)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECT
T ss_pred             EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcC
Confidence            999999999999999999999997532         346899999999999999999997   79999999999999999


Q ss_pred             CCcEEEeeecceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhh
Q 047591         1471 DMVAHLGDFGIAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKH 1548 (1624)
Q Consensus      1471 ~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~ 1548 (1624)
                      ++.+||+|||+++....... .......||+.|+|||+..+..++.++|||||||++|||+| |+.||....... ....
T Consensus       174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~  252 (322)
T 1p4o_A          174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-VLRF  252 (322)
T ss_dssp             TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-HHHH
T ss_pred             CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH-HHHH
Confidence            99999999999986643222 12233467899999999988889999999999999999999 888886532211 1111


Q ss_pred             hhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 047591         1549 WVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKT 1615 (1624)
Q Consensus      1549 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~ 1615 (1624)
                                  +........        +..++..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus       253 ------------~~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          253 ------------VMEGGLLDK--------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             ------------HHTTCCCCC--------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             ------------HHcCCcCCC--------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence                        111111110        01345668899999999999999999999999987644


No 176
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=9.7e-37  Score=357.04  Aligned_cols=248  Identities=23%  Similarity=0.386  Sum_probs=183.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+. .+|+.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            4577788999999999999987 468999999986432   223478999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++|+|.+++......+++.++..++.|+++||+|||+   .+|+||||||+||+++.++.+||+|||+++.......
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~  167 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE  167 (278)
T ss_dssp             ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred             ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence            9999999999998776778999999999999999999996   7999999999999999999999999999987653221


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                       ......||+.|+|||...+..++.++|||||||++|||+||+.||........ +........          ..    
T Consensus       168 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~----------~~----  231 (278)
T 3cok_A          168 -KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-LNKVVLADY----------EM----  231 (278)
T ss_dssp             -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------CCSSCC----------CC----
T ss_pred             -cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-HHHHhhccc----------CC----
Confidence             22335799999999999888899999999999999999999999865322111 100000000          00    


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                             +..++..+.+++.+|++.||++|||++|+++
T Consensus       232 -------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          232 -------PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             -------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -------ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence                   0113345778999999999999999999986


No 177
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=7.8e-37  Score=366.38  Aligned_cols=250  Identities=21%  Similarity=0.271  Sum_probs=180.0

Q ss_pred             CCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcC-CCceeEEEeeeccCCeeEEEEEecCCCC
Q 047591         1340 SNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIR-HRNLAKIVSSCSNPGFKALILQYMPQGS 1417 (1624)
Q Consensus      1340 ~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~-HpNIv~l~g~~~~~~~~~lV~ey~~~gs 1417 (1624)
                      .+.||+|+||+||+|+.. +++.||||++...   ....+.+|+++++++. ||||+++++++.+++..++||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            478999999999999885 5889999998643   3456788999999997 9999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCC---cEEEeeecceeecCCCCCcccc
Q 047591         1418 LEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDM---VAHLGDFGIAKLLDGVDSMKQT 1494 (1624)
Q Consensus      1418 L~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~---~~kl~DFGla~~~~~~~~~~~~ 1494 (1624)
                      |.+++... ..+++.++..|+.|++.||+|||+   .+|+||||||+|||++.++   .+||+|||+|+...... ....
T Consensus        93 L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~  167 (325)
T 3kn6_A           93 LFERIKKK-KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLK  167 (325)
T ss_dssp             HHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred             HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Cccc
Confidence            99999875 458999999999999999999996   7999999999999998765   89999999998765332 2233


Q ss_pred             ccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHHH
Q 047591         1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEAD 1574 (1624)
Q Consensus      1495 ~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 1574 (1624)
                      ...||+.|+|||++.+..++.++|||||||++|||+||+.||..........       ......+.+......    ..
T Consensus       168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-------~~~~~~~~i~~~~~~----~~  236 (325)
T 3kn6_A          168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCT-------SAVEIMKKIKKGDFS----FE  236 (325)
T ss_dssp             ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CC-------CHHHHHHHHTTTCCC----CC
T ss_pred             ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccc-------cHHHHHHHHHcCCCC----CC
Confidence            4578999999999999999999999999999999999999997532110000       000011111111000    01


Q ss_pred             HHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1575 IAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1575 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      ...+..++..+.+++.+|++.||++|||++|+++
T Consensus       237 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            1122345677899999999999999999998873


No 178
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=5.8e-37  Score=362.90  Aligned_cols=248  Identities=24%  Similarity=0.348  Sum_probs=193.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchh--------------------------hHHHHHHHHHHHHHh
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQED--------------------------RALKSFDAECEVMRR 1387 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~--------------------------~~~~~f~~E~~~l~~ 1387 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++.....                          ...+.|.+|++++++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            56888899999999999999875 588899999864321                          123578999999999


Q ss_pred             cCCCceeEEEeeecc--CCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCc
Q 047591         1388 IRHRNLAKIVSSCSN--PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSN 1465 (1624)
Q Consensus      1388 l~HpNIv~l~g~~~~--~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~N 1465 (1624)
                      ++||||+++++++.+  .+..++||||+++|+|.+++.  ...+++.++..++.|+++||+|||+   .+|+||||||+|
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~N  167 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSN  167 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGG
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHH
Confidence            999999999999976  567899999999999987653  3468999999999999999999997   799999999999


Q ss_pred             EEecCCCcEEEeeecceeecCCCCCccccccccccccccccccCCCC---cCcccchHHHHHHHHHHHcCCCCCCCCCcc
Q 047591         1466 VLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI---VSTSGDVYSFGILMMETLTRRKPTDDMFTG 1542 (1624)
Q Consensus      1466 ILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~---~~~k~DV~SfGvil~Elltg~~P~~~~~~~ 1542 (1624)
                      ||++.++.+||+|||+|+....... ......||+.|+|||...+..   ++.++|||||||++|||++|+.||.+....
T Consensus       168 il~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~  246 (298)
T 2zv2_A          168 LLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM  246 (298)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence            9999999999999999987754322 223457999999999887654   478999999999999999999999653211


Q ss_pred             chhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1543 EVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1543 ~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                        .+..           .+..... ....      ...++..+.+++.+||+.||++|||++|+++
T Consensus       247 --~~~~-----------~~~~~~~-~~~~------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          247 --CLHS-----------KIKSQAL-EFPD------QPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             --HHHH-----------HHHHCCC-CCCS------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             --HHHH-----------HHhcccC-CCCC------ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence              1100           0000000 0000      0123456788999999999999999999975


No 179
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=1.3e-36  Score=362.14  Aligned_cols=262  Identities=22%  Similarity=0.329  Sum_probs=199.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc---hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||.||+|+.. +|+.||||++...   .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            35777889999999999999874 6899999998642   3445678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1411 QYMPQGSLEKWLYS---HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      ||+++|+|.+++..   ....+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++....
T Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~  188 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  188 (310)
T ss_dssp             ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred             ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence            99999999999874   34568999999999999999999996   7999999999999999999999999999987643


Q ss_pred             CCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1488 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      ... ......||+.|+|||...+..++.++|||||||++|||+||+.||.........+...            +.....
T Consensus       189 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~------------~~~~~~  255 (310)
T 2wqm_A          189 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK------------IEQCDY  255 (310)
T ss_dssp             -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHH------------HHTTCS
T ss_pred             CCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHH------------hhcccC
Confidence            221 2234568999999999988899999999999999999999999986432211111111            110000


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      ....      ...++..+.+++.+||+.||++|||++|+++.|++++....
T Consensus       256 ~~~~------~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~  300 (310)
T 2wqm_A          256 PPLP------SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA  300 (310)
T ss_dssp             CCCC------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             CCCc------ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence            0000      01234568889999999999999999999999999987644


No 180
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=3e-36  Score=352.70  Aligned_cols=250  Identities=22%  Similarity=0.272  Sum_probs=203.5

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      +.|...+.||+|+||+||+|+.. ++..||+|++........+.|.+|++++++++||||+++++++.+.+..++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            45777889999999999999876 46789999987655555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe---cCCCcEEEeeecceeecCCCCC
Q 047591         1414 PQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl---d~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ++|+|.+++...+ .+++.++..++.|++.||+|||+   .+|+||||||+||++   +.++.+||+|||+++...... 
T Consensus        89 ~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~-  163 (277)
T 3f3z_A           89 TGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-  163 (277)
T ss_dssp             CSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS-
T ss_pred             CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc-
Confidence            9999999987643 47899999999999999999996   799999999999999   788999999999998775432 


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                       ......||+.|+|||...+ .++.++|||||||++|||+||+.||......+. ........             ....
T Consensus       164 -~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~-------------~~~~  227 (277)
T 3f3z_A          164 -MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV-MLKIREGT-------------FTFP  227 (277)
T ss_dssp             -CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCC-------------CCCC
T ss_pred             -chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCC-------------CCCC
Confidence             2234579999999998765 489999999999999999999999975432111 11111110             0000


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                          ......++..+.+++.+|++.+|++|||+.|+++.
T Consensus       228 ----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          228 ----EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             ----HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             ----chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                01112345678899999999999999999999863


No 181
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=4.4e-37  Score=366.58  Aligned_cols=264  Identities=23%  Similarity=0.421  Sum_probs=200.1

Q ss_pred             HHHHhCCCCcCCeEeecCceEEEEEEEcC----CceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccC
Q 047591         1330 LRLATNGFSESNLLGTGIFSSVYKATFAD----GTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNP 1403 (1624)
Q Consensus      1330 l~~at~~f~~~~~lG~G~~G~Vyk~~~~~----~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~ 1403 (1624)
                      +....++|...+.||+|+||+||+|++..    +..||||+++..  .....+.|.+|++++++++||||+++++++.+.
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  108 (313)
T 3brb_A           29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM  108 (313)
T ss_dssp             TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred             cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence            33445677888899999999999997742    347999998643  344567899999999999999999999999765


Q ss_pred             Ce-----eEEEEEecCCCCHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc
Q 047591         1404 GF-----KALILQYMPQGSLEKWLYS-----HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV 1473 (1624)
Q Consensus      1404 ~~-----~~lV~ey~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~ 1473 (1624)
                      +.     .++||||+++|+|.+++..     ....+++.+++.|+.|+++||+|||+   .+|+||||||+||++++++.
T Consensus       109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~  185 (313)
T 3brb_A          109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMT  185 (313)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSC
T ss_pred             cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCc
Confidence            53     4999999999999999953     23568999999999999999999996   79999999999999999999


Q ss_pred             EEEeeecceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhh
Q 047591         1474 AHLGDFGIAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVE 1551 (1624)
Q Consensus      1474 ~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~ 1551 (1624)
                      +||+|||+++....... .......+++.|+|||...+..++.++|||||||++|||+| |+.||........ ....  
T Consensus       186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~~~~--  262 (313)
T 3brb_A          186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM-YDYL--  262 (313)
T ss_dssp             EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-HHHH--
T ss_pred             EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-HHHH--
Confidence            99999999987643321 12233467889999999988899999999999999999999 8888865432211 1111  


Q ss_pred             hcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1552 ESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1552 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                                ........        +..++..+.+++.+||+.+|++|||+.|+++.|+++..++
T Consensus       263 ----------~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          263 ----------LHGHRLKQ--------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             ----------HTTCCCCC--------BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             ----------HcCCCCCC--------CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence                      11000000        0234556889999999999999999999999999987764


No 182
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=4.1e-37  Score=367.53  Aligned_cols=260  Identities=23%  Similarity=0.272  Sum_probs=204.4

Q ss_pred             hCCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeec----cCCeeEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS----NPGFKAL 1408 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~----~~~~~~l 1408 (1624)
                      .++|...+.||+|+||.||+|+. .+++.||||++........+.+.+|++++++++||||+++++++.    .....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            35677789999999999999987 468999999987666666788999999999999999999999986    3447899


Q ss_pred             EEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeec
Q 047591         1409 ILQYMPQGSLEKWLYS---HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL 1485 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~ 1485 (1624)
                      ||||+++|+|.+++..   .+..+++.++..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++..
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            9999999999999975   35678999999999999999999997   79999999999999999999999999998865


Q ss_pred             CCCCCc--------cccccccccccccccccCCCC---cCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcC
Q 047591         1486 DGVDSM--------KQTMTLATIGYMAPEYGSEGI---VSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESL 1554 (1624)
Q Consensus      1486 ~~~~~~--------~~~~~~gt~~y~APE~~~~~~---~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~ 1554 (1624)
                      ......        ......||+.|+|||.+....   ++.++|||||||++|||++|+.||+..........       
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-------  257 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA-------  257 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH-------
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh-------
Confidence            321110        012345799999999876543   78999999999999999999999853211111111       


Q ss_pred             ChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 047591         1555 PDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKT 1615 (1624)
Q Consensus      1555 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~ 1615 (1624)
                           ..+........       ...++..+.+++.+||+.+|++|||+.|+++.|++++.
T Consensus       258 -----~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          258 -----LAVQNQLSIPQ-------SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             -----HHHHCC--CCC-------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             -----HHhhccCCCCc-------cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence                 11110000000       01234568899999999999999999999999998754


No 183
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00  E-value=3.1e-36  Score=379.88  Aligned_cols=357  Identities=24%  Similarity=0.351  Sum_probs=188.7

Q ss_pred             CCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCcccccccccccccccccCcccccccccceeccCCcCCCC
Q 047591          146 SNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGE  225 (1624)
Q Consensus       146 ~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~  225 (1624)
                      .+.+.+.++..   .+++|+.|++++|.++. +|. +..+++|++|||++|++++..|  ++++++|++|+|++|++++.
T Consensus        33 ~~~~~~~i~~~---~l~~l~~L~l~~~~i~~-l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~  105 (466)
T 1o6v_A           33 KTNVTDTVSQT---DLDQVTTLQADRLGIKS-IDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI  105 (466)
T ss_dssp             CSSTTSEECHH---HHHTCCEEECCSSCCCC-CTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC
T ss_pred             ccccccccChh---HhccccEEecCCCCCcc-Ccc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccC
Confidence            34444444432   35567778888887763 553 6777778888888887774433  77777777777777777754


Q ss_pred             CCCcccccCccchheeccccccCCCCccccccCCCCcEeecccccccCcCCccccccCcCCeeeccCCcccccCcccccc
Q 047591          226 FPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTG  305 (1624)
Q Consensus       226 ~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g  305 (1624)
                      .|  ++++++|++|+|++|.+++ +|.  +..+++|++|++++|.+++. | .++.+++|+.|+++ |            
T Consensus       106 ~~--~~~l~~L~~L~L~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~------------  165 (466)
T 1o6v_A          106 TP--LANLTNLTGLTLFNNQITD-IDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-N------------  165 (466)
T ss_dssp             GG--GTTCTTCCEEECCSSCCCC-CGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-E------------
T ss_pred             hh--hcCCCCCCEEECCCCCCCC-ChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-C------------
Confidence            43  6677777777777777663 332  45666666666666666542 2 35555555555553 2            


Q ss_pred             ccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCccccc
Q 047591          306 LIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFG  385 (1624)
Q Consensus       306 ~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~  385 (1624)
                                          .+.+. +.  ..++++|++|++++|++++. + .+..+++|++|++++|.+++..|  ++
T Consensus       166 --------------------~~~~~-~~--~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--~~  218 (466)
T 1o6v_A          166 --------------------QVTDL-KP--LANLTTLERLDISSNKVSDI-S-VLAKLTNLESLIATNNQISDITP--LG  218 (466)
T ss_dssp             --------------------SCCCC-GG--GTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCCCGG--GG
T ss_pred             --------------------cccCc-hh--hccCCCCCEEECcCCcCCCC-h-hhccCCCCCEEEecCCccccccc--cc
Confidence                                22211 11  12445555555555555532 2 35555666666666666655544  45


Q ss_pred             ccccccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcC
Q 047591          386 NCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFG  465 (1624)
Q Consensus       386 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~  465 (1624)
                      .+++|++|++++|++...         ..+..+++|++|++++|.+                         .+..|  +.
T Consensus       219 ~l~~L~~L~l~~n~l~~~---------~~l~~l~~L~~L~l~~n~l-------------------------~~~~~--~~  262 (466)
T 1o6v_A          219 ILTNLDELSLNGNQLKDI---------GTLASLTNLTDLDLANNQI-------------------------SNLAP--LS  262 (466)
T ss_dssp             GCTTCCEEECCSSCCCCC---------GGGGGCTTCSEEECCSSCC-------------------------CCCGG--GT
T ss_pred             ccCCCCEEECCCCCcccc---------hhhhcCCCCCEEECCCCcc-------------------------ccchh--hh
Confidence            555555555555554320         1112222222222222222                         11111  34


Q ss_pred             CCCcccEEeccCCccCCCccchhccccccceecccccccccCCCccccCCCCCceeecccccccCCCccccccccCCccc
Q 047591          466 NLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCLANLTSLRAL  545 (1624)
Q Consensus       466 ~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L  545 (1624)
                      .+++|++|+|++|++++..|  +..+++|+.|+|++|++++..|  +..+++|+.|+|++|++++..|  ++.+++|+.|
T Consensus       263 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L  336 (466)
T 1o6v_A          263 GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL  336 (466)
T ss_dssp             TCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred             cCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence            44555555555555554322  4455555555555555553222  4445555555555555554333  4444555555


Q ss_pred             cccCccccccCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCccccccCCccccccccccCCCC
Q 047591          546 NLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQ  625 (1624)
Q Consensus       546 ~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~  625 (1624)
                      ++++|++++.                          ..++++++|+.|++++|++++.+|  ++.+++|+.|++++|+++
T Consensus       337 ~l~~n~l~~~--------------------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~  388 (466)
T 1o6v_A          337 FFYNNKVSDV--------------------------SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT  388 (466)
T ss_dssp             ECCSSCCCCC--------------------------GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred             ECCCCccCCc--------------------------hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence            5555555442                          244555555555555555555444  555555555555555555


Q ss_pred             C
Q 047591          626 G  626 (1624)
Q Consensus       626 g  626 (1624)
                      +
T Consensus       389 ~  389 (466)
T 1o6v_A          389 N  389 (466)
T ss_dssp             C
T ss_pred             C
Confidence            4


No 184
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=1.4e-36  Score=370.60  Aligned_cols=253  Identities=17%  Similarity=0.136  Sum_probs=202.0

Q ss_pred             HHhCCCCcCCeEeecCceEEEEEE------EcCCceEEEEEeccchhhHHHHHHHHHHHHHhcC---CCceeEEEeeecc
Q 047591         1332 LATNGFSESNLLGTGIFSSVYKAT------FADGTNAAIKIFSLQEDRALKSFDAECEVMRRIR---HRNLAKIVSSCSN 1402 (1624)
Q Consensus      1332 ~at~~f~~~~~lG~G~~G~Vyk~~------~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~---HpNIv~l~g~~~~ 1402 (1624)
                      ...+.|...+.||+|+||+||+|+      ..+++.||||+++...   ..+|.+|++++++++   |+||+++++++..
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            345678888999999999999994      3468899999986443   356778888888886   9999999999999


Q ss_pred             CCeeEEEEEecCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC--------
Q 047591         1403 PGFKALILQYMPQGSLEKWLYS----HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD-------- 1470 (1624)
Q Consensus      1403 ~~~~~lV~ey~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~-------- 1470 (1624)
                      .+..++|||||++|+|.+++..    ....+++..++.|+.||++||+|||+   .+||||||||+|||++.        
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~  215 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDE  215 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC---
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccc
Confidence            9999999999999999999975    34569999999999999999999996   79999999999999998        


Q ss_pred             ---CCcEEEeeecceeecCCC-CCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhh
Q 047591         1471 ---DMVAHLGDFGIAKLLDGV-DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCL 1546 (1624)
Q Consensus      1471 ---~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l 1546 (1624)
                         ++.+||+|||+|+.+... .........||++|||||++.+..++.++|||||||++|||+||+.||.....+....
T Consensus       216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~  295 (365)
T 3e7e_A          216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKP  295 (365)
T ss_dssp             ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEE
T ss_pred             ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceee
Confidence               899999999999875421 2223345679999999999999999999999999999999999999985422211110


Q ss_pred             hhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCC-CCHHHHHHHHHHHHHH
Q 047591         1547 KHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEER-MNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1547 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R-Pt~~evl~~L~~i~~~ 1616 (1624)
                      ...    .             ...         .....+.+++.+|++.+|.+| |+++++.+.|+++..+
T Consensus       296 ~~~----~-------------~~~---------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          296 EGL----F-------------RRL---------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             CSC----C-------------TTC---------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             chh----c-------------ccc---------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence            000    0             000         012234567889999999998 5788888888876544


No 185
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=1.4e-36  Score=367.28  Aligned_cols=244  Identities=21%  Similarity=0.250  Sum_probs=202.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            46777889999999999999885 68999999986432   234578899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+|+.....  
T Consensus       121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--  194 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred             cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence            9999999999998654 47889999999999999999996   79999999999999999999999999999976432  


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                        ....+||+.|+|||++.+..++.++|||||||++|||+||+.||...... .....            +...... - 
T Consensus       195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~------------i~~~~~~-~-  257 (350)
T 1rdq_E          195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEK------------IVSGKVR-F-  257 (350)
T ss_dssp             --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH------------HHHCCCC-C-
T ss_pred             --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-HHHHH------------HHcCCCC-C-
Confidence              23457999999999998889999999999999999999999999653211 11111            1111110 0 


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMN-----VKDALA 1608 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt-----~~evl~ 1608 (1624)
                             +..++..+.+++.+|++.||++||+     ++|+++
T Consensus       258 -------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          258 -------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             -------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             -------CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence                   0123456788999999999999998     777765


No 186
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=6.9e-37  Score=397.63  Aligned_cols=251  Identities=25%  Similarity=0.372  Sum_probs=200.5

Q ss_pred             CeEeecCceEEEEEEEc---CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEecCC
Q 047591         1341 NLLGTGIFSSVYKATFA---DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQ 1415 (1624)
Q Consensus      1341 ~~lG~G~~G~Vyk~~~~---~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~~~ 1415 (1624)
                      +.||+|+||+||+|.+.   .++.||||+++...  ....++|.+|+++|++++|||||+++++|.. +..++|||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            47999999999999764   35789999987543  2346789999999999999999999999964 457899999999


Q ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC--ccc
Q 047591         1416 GSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS--MKQ 1493 (1624)
Q Consensus      1416 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~--~~~ 1493 (1624)
                      |+|.+++... ..+++.++..|+.||+.||+|||+   .+||||||||+|||+++++.+||+|||+|+.+.....  ...
T Consensus       454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~  529 (635)
T 4fl3_A          454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  529 (635)
T ss_dssp             EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred             CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence            9999999764 458999999999999999999996   7999999999999999999999999999987754322  122


Q ss_pred             cccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchH
Q 047591         1494 TMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEE 1572 (1624)
Q Consensus      1494 ~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 1572 (1624)
                      ....||+.|+|||++....++.++|||||||++|||+| |+.||......+              +.+.+.......   
T Consensus       530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--------------~~~~i~~~~~~~---  592 (635)
T 4fl3_A          530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--------------VTAMLEKGERMG---  592 (635)
T ss_dssp             -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------------HHHHHHTTCCCC---
T ss_pred             cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------------HHHHHHcCCCCC---
Confidence            33457889999999988899999999999999999999 999997643211              111111111100   


Q ss_pred             HHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1573 ADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1573 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                          .+..++..+.+++.+||+.||++|||++++++.|+++...+
T Consensus       593 ----~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l  633 (635)
T 4fl3_A          593 ----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  633 (635)
T ss_dssp             ----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             ----CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence                01235677899999999999999999999999999876553


No 187
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=5.1e-37  Score=371.05  Aligned_cols=251  Identities=22%  Similarity=0.339  Sum_probs=196.0

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCC--CceeEEEeeeccCCeeEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRH--RNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~H--pNIv~l~g~~~~~~~~~lV 1409 (1624)
                      .+.|...+.||+|+||+||+|...+++.||||++...  .....+.|.+|++++++++|  |||+++++++.+++..++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            3567788999999999999999888999999998643  33456789999999999987  9999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC
Q 047591         1410 LQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~ 1489 (1624)
                      || +.+|+|.+++... ..+++.++..|+.||+.||+|||+   .+|+||||||+|||++ ++.+||+|||+|+......
T Consensus        88 ~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~  161 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  161 (343)
T ss_dssp             EC-CCSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred             Ee-CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence            99 5688999999875 457899999999999999999997   7999999999999997 5789999999998765332


Q ss_pred             C-ccccccccccccccccccCC-----------CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChh
Q 047591         1490 S-MKQTMTLATIGYMAPEYGSE-----------GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDA 1557 (1624)
Q Consensus      1490 ~-~~~~~~~gt~~y~APE~~~~-----------~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~ 1557 (1624)
                      . .......||+.|+|||++.+           ..++.++|||||||++|||+||+.||.........+.          
T Consensus       162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----------  231 (343)
T 3dbq_A          162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH----------  231 (343)
T ss_dssp             --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH----------
T ss_pred             ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHH----------
Confidence            2 12334579999999998754           6789999999999999999999999975432211111          


Q ss_pred             HHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1558 VTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1558 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                        ..++........       ..++..+.+++.+||+.||++|||+.|+++.
T Consensus       232 --~~~~~~~~~~~~-------~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          232 --AIIDPNHEIEFP-------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             --HHHCTTSCCCCC-------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             --HHhcCCcccCCc-------ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence              112211110000       0123457789999999999999999999864


No 188
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=8.2e-37  Score=375.42  Aligned_cols=250  Identities=21%  Similarity=0.340  Sum_probs=196.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccc--hhhHHHHHHHHHHHHHhcC--CCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIR--HRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~--HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      +.|...+.||+|+||+||+|...+++.||||++...  .....+.|.+|++++++++  |||||++++++..++..++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            347788999999999999999888999999998643  3445678999999999996  599999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      | +.+|+|.+++.... .+++.++..|+.||+.||+|||+   .+|+||||||+|||++ ++.+||+|||+|+.+.....
T Consensus       136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~  209 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT  209 (390)
T ss_dssp             E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred             e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence            9 67889999998754 67888999999999999999996   7999999999999996 58999999999987653322


Q ss_pred             -ccccccccccccccccccCC-----------CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhH
Q 047591         1491 -MKQTMTLATIGYMAPEYGSE-----------GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAV 1558 (1624)
Q Consensus      1491 -~~~~~~~gt~~y~APE~~~~-----------~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~ 1558 (1624)
                       ......+||+.|||||++.+           ..++.++|||||||++|||+||+.||.........+            
T Consensus       210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~------------  277 (390)
T 2zmd_A          210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL------------  277 (390)
T ss_dssp             ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH------------
T ss_pred             cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHH------------
Confidence             12334579999999998754           468999999999999999999999997543211111            


Q ss_pred             HHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1559 TDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1559 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ..+++........       ..++..+.+++.+||+.||++|||+.|+++.
T Consensus       278 ~~~~~~~~~~~~~-------~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          278 HAIIDPNHEIEFP-------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             HHHHCTTSCCCCC-------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHhCccccCCCC-------ccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            1122211110000       0123457789999999999999999999864


No 189
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=2e-37  Score=379.61  Aligned_cols=251  Identities=18%  Similarity=0.246  Sum_probs=194.3

Q ss_pred             hCCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccc---hhhHHHHHHHHH---HHHHhcCCCceeEEE-------ee
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQ---EDRALKSFDAEC---EVMRRIRHRNLAKIV-------SS 1399 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~---~~~~~~~f~~E~---~~l~~l~HpNIv~l~-------g~ 1399 (1624)
                      .+.|...+.||+|+||+||+|+. .+|+.||||++...   .....+.|.+|+   +++++++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            35677788999999999999987 46899999998632   334568899999   555666899999998       55


Q ss_pred             eccCC-----------------eeEEEEEecCCCCHHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHhhhcCCCce
Q 047591         1400 CSNPG-----------------FKALILQYMPQGSLEKWLYSHNYL------LNIEQRLDIMIDVACALEYLHQGYSTSI 1456 (1624)
Q Consensus      1400 ~~~~~-----------------~~~lV~ey~~~gsL~~~l~~~~~~------l~~~~~~~i~~~ia~gl~yLH~~~~~~i 1456 (1624)
                      +.+++                 ..++||||+ +|+|.+++...+..      +++..++.|+.||+.||+|||+   .+|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence            44442                 278999999 68999999864322      3368889999999999999997   799


Q ss_pred             EEcCCCCCcEEecCCCcEEEeeecceeecCCCCCccccccccccccccccccCCC-----------CcCcccchHHHHHH
Q 047591         1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG-----------IVSTSGDVYSFGIL 1525 (1624)
Q Consensus      1457 iHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-----------~~~~k~DV~SfGvi 1525 (1624)
                      +||||||+|||++.++.+||+|||+|+....    ......| +.|||||++.+.           .++.++|||||||+
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence            9999999999999999999999999986432    2234567 999999998877           89999999999999


Q ss_pred             HHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHH
Q 047591         1526 MMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKD 1605 (1624)
Q Consensus      1526 l~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~e 1605 (1624)
                      +|||+||+.||........  ..++...                .        ..++..+.+++.+||+.||++|||+.|
T Consensus       303 l~elltg~~Pf~~~~~~~~--~~~~~~~----------------~--------~~~~~~~~~li~~~L~~dp~~Rpt~~e  356 (377)
T 3byv_A          303 IYWIWCADLPITKDAALGG--SEWIFRS----------------C--------KNIPQPVRALLEGFLRYPKEDRLLPLQ  356 (377)
T ss_dssp             HHHHHHSSCCC------CC--SGGGGSS----------------C--------CCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred             HHHHHHCCCCCcccccccc--hhhhhhh----------------c--------cCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence            9999999999865321111  0000000                0        123456788999999999999999999


Q ss_pred             HHH--HHHHHHHHHhh
Q 047591         1606 ALA--NLKKIKTKFLK 1619 (1624)
Q Consensus      1606 vl~--~L~~i~~~~~~ 1619 (1624)
                      +++  .+++++.....
T Consensus       357 ~l~hp~f~~~~~~~~~  372 (377)
T 3byv_A          357 AMETPEYEQLRTELSA  372 (377)
T ss_dssp             HHTSHHHHHHHHHHHH
T ss_pred             HhhChHHHHHHHHHHH
Confidence            996  56666655443


No 190
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.4e-36  Score=364.61  Aligned_cols=247  Identities=23%  Similarity=0.299  Sum_probs=191.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEE----cCCceEEEEEeccch----hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCee
Q 047591         1335 NGFSESNLLGTGIFSSVYKATF----ADGTNAAIKIFSLQE----DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFK 1406 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~----~~~~~vAvK~~~~~~----~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~ 1406 (1624)
                      ++|...+.||+|+||+||+|+.    .+++.||+|+++...    ......+.+|++++++++||||+++++++.+.+..
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            4677789999999999999987    468899999986432    23456788999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecC
Q 047591         1407 ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~ 1486 (1624)
                      ++||||+++|+|.+++...+ .+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~  172 (327)
T 3a62_A           97 YLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI  172 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred             EEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence            99999999999999997643 57888999999999999999997   799999999999999999999999999998653


Q ss_pred             CCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhc
Q 047591         1487 GVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANL 1566 (1624)
Q Consensus      1487 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 1566 (1624)
                      ... .......||+.|||||++.+..++.++|||||||++|||++|+.||........ .            ..+.....
T Consensus       173 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~------------~~i~~~~~  238 (327)
T 3a62_A          173 HDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT-I------------DKILKCKL  238 (327)
T ss_dssp             -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-H------------HHHHHTCC
T ss_pred             cCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH-H------------HHHHhCCC
Confidence            222 122345799999999999888999999999999999999999999975322111 1            11111111


Q ss_pred             cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047591         1567 LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERM-----NVKDALA 1608 (1624)
Q Consensus      1567 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----t~~evl~ 1608 (1624)
                       ...        ..++..+.+++.+|++.+|++||     ++.|+++
T Consensus       239 -~~p--------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          239 -NLP--------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             -CCC--------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             -CCC--------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence             000        12345678899999999999999     6777765


No 191
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1.1e-36  Score=359.25  Aligned_cols=259  Identities=23%  Similarity=0.353  Sum_probs=205.6

Q ss_pred             hCCCCcCC-eEeecCceEEEEEEEc---CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeE
Q 047591         1334 TNGFSESN-LLGTGIFSSVYKATFA---DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1334 t~~f~~~~-~lG~G~~G~Vyk~~~~---~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      .+.|...+ .||+|+||+||+|.+.   +++.||||+++...  ....+.|.+|++++++++||||+++++++ +.+..+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            34566666 8999999999999653   36789999986442  23467899999999999999999999999 567789


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      +||||+++|+|.+++... ..+++.++..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++....
T Consensus        94 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  169 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  169 (291)
T ss_dssp             EEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             EEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence            999999999999999865 358899999999999999999997   7999999999999999999999999999987754


Q ss_pred             CCCcc--ccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhh
Q 047591         1488 VDSMK--QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDA 1564 (1624)
Q Consensus      1488 ~~~~~--~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 1564 (1624)
                      .....  .....||+.|+|||...+..++.++|||||||++|||+| |+.||......+  ..            +.+..
T Consensus       170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~------------~~~~~  235 (291)
T 1xbb_A          170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VT------------AMLEK  235 (291)
T ss_dssp             TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HH------------HHHHT
T ss_pred             CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HH------------HHHHc
Confidence            33221  223456789999999988889999999999999999999 999987532211  11            11111


Q ss_pred             hccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1565 NLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1565 ~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      ......       +..++..+.+++.+||+.+|++||++.|+++.|+++-....
T Consensus       236 ~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  282 (291)
T 1xbb_A          236 GERMGC-------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  282 (291)
T ss_dssp             TCCCCC-------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence            100000       12345678899999999999999999999999999876644


No 192
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=6.7e-37  Score=370.26  Aligned_cols=258  Identities=21%  Similarity=0.297  Sum_probs=199.2

Q ss_pred             HHHhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-----hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC
Q 047591         1331 RLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-----DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG 1404 (1624)
Q Consensus      1331 ~~at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-----~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~ 1404 (1624)
                      ....++|...+.||+|+||+||+|+.. +++.||+|++....     ....+.+.+|++++++++||||+++++++.+.+
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  101 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence            334567888899999999999999875 57889999986432     345678999999999999999999999999999


Q ss_pred             eeEEEEEecCCCCHHHHHHhc---------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 047591         1405 FKALILQYMPQGSLEKWLYSH---------------------------------------NYLLNIEQRLDIMIDVACAL 1445 (1624)
Q Consensus      1405 ~~~lV~ey~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~~ia~gl 1445 (1624)
                      ..++||||+++|+|.+++...                                       ...+++..+..|+.||+.||
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  181 (345)
T 3hko_A          102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL  181 (345)
T ss_dssp             EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence            999999999999999988521                                       11235667788999999999


Q ss_pred             HHhhhcCCCceEEcCCCCCcEEecCCC--cEEEeeecceeecCCCC---CccccccccccccccccccCC--CCcCcccc
Q 047591         1446 EYLHQGYSTSIIHCDLKPSNVLLDDDM--VAHLGDFGIAKLLDGVD---SMKQTMTLATIGYMAPEYGSE--GIVSTSGD 1518 (1624)
Q Consensus      1446 ~yLH~~~~~~iiHrDlK~~NILld~~~--~~kl~DFGla~~~~~~~---~~~~~~~~gt~~y~APE~~~~--~~~~~k~D 1518 (1624)
                      +|||+   .+|+||||||+||+++.++  .+||+|||+|+.+....   ........||+.|+|||.+.+  ..++.++|
T Consensus       182 ~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D  258 (345)
T 3hko_A          182 HYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD  258 (345)
T ss_dssp             HHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred             HHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence            99997   7999999999999998776  89999999998764322   112334579999999998764  67899999


Q ss_pred             hHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCC
Q 047591         1519 VYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPE 1598 (1624)
Q Consensus      1519 V~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~ 1598 (1624)
                      ||||||++|||+||+.||......+. ..            .++.........     ....++..+.+++.+|++.+|+
T Consensus       259 iwslG~il~el~~g~~pf~~~~~~~~-~~------------~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~  320 (345)
T 3hko_A          259 AWSAGVLLHLLLMGAVPFPGVNDADT-IS------------QVLNKKLCFENP-----NYNVLSPLARDLLSNLLNRNVD  320 (345)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHH-HH------------HHHHCCCCTTSG-----GGGGSCHHHHHHHHHHSCSCTT
T ss_pred             HHHHHHHHHHHHHCCCCCCCCChHHH-HH------------HHHhcccccCCc-----ccccCCHHHHHHHHHHcCCChh
Confidence            99999999999999999975432211 11            111111100000     0112345678899999999999


Q ss_pred             CCCCHHHHHHH
Q 047591         1599 ERMNVKDALAN 1609 (1624)
Q Consensus      1599 ~RPt~~evl~~ 1609 (1624)
                      +|||+.|+++.
T Consensus       321 ~Rps~~~~l~h  331 (345)
T 3hko_A          321 ERFDAMRALQH  331 (345)
T ss_dssp             TSCCHHHHHHS
T ss_pred             HCCCHHHHhcC
Confidence            99999999863


No 193
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.6e-36  Score=366.91  Aligned_cols=249  Identities=21%  Similarity=0.258  Sum_probs=201.3

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEcC-CceEEEEEeccch---hhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeE
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQE---DRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~~-~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      ..++|...++||+|+||+||+|+... ++.||||+++...   ....+.+.+|..+++.+ +||||+++++++.+.+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            34678888999999999999998864 7889999986442   23456788999999987 8999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      +||||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+   .+|+||||||+|||++.++++||+|||+|+....
T Consensus        98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  173 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  173 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence            9999999999999998654 57899999999999999999996   7999999999999999999999999999986432


Q ss_pred             CCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1488 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      .. ......+||+.|||||++.+..++.++|||||||++|||++|+.||......+ ...            .+......
T Consensus       174 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~------------~i~~~~~~  239 (353)
T 2i0e_A          174 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQ------------SIMEHNVA  239 (353)
T ss_dssp             TT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHH------------HHHHCCCC
T ss_pred             CC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH-HHH------------HHHhCCCC
Confidence            22 22345679999999999998999999999999999999999999997532111 111            11111110


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNV-----KDALA 1608 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~-----~evl~ 1608 (1624)
                      -         +...+..+.+++.+|++.+|++||++     +|+.+
T Consensus       240 ~---------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          240 Y---------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             C---------CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             C---------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            0         01234567889999999999999964     55554


No 194
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.6e-36  Score=361.15  Aligned_cols=257  Identities=21%  Similarity=0.261  Sum_probs=198.8

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++....   ....+.+.+|++++++++||||+++++++..++..++||
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM  113 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence            57888899999999999999875 68899999986442   234578999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++++|.+++...+ .+++.++..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++.......
T Consensus       114 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  189 (309)
T 2h34_A          114 RLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL  189 (309)
T ss_dssp             ECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred             EecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence            9999999999998643 57899999999999999999997   7999999999999999999999999999987654333


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                      .......||+.|+|||...+..++.++|||||||++|||+||+.||......  .+...+....+.             .
T Consensus       190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~-------------~  254 (309)
T 2h34_A          190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPR-------------P  254 (309)
T ss_dssp             -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCC-------------G
T ss_pred             ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCC-------------c
Confidence            3334457999999999999899999999999999999999999999753211  111111111100             0


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERM-NVKDALANLKKIK 1614 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-t~~evl~~L~~i~ 1614 (1624)
                      .    .....++..+.+++.+||+.+|++|| +++++++.|++..
T Consensus       255 ~----~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          255 S----TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             G----GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             c----ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence            0    00123455688899999999999999 9999999998763


No 195
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=6.5e-37  Score=367.09  Aligned_cols=269  Identities=20%  Similarity=0.290  Sum_probs=198.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchh-hHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQED-RALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~-~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.+++..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            46777889999999999999886 688999999864432 2223566899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcc
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~ 1492 (1624)
                      ++ |+|.+++...+..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+...... ..
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~  156 (324)
T 3mtl_A           82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KT  156 (324)
T ss_dssp             CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cc
Confidence            98 69999998877789999999999999999999996   799999999999999999999999999998654322 22


Q ss_pred             ccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhh---h----cCChhHH--HHH
Q 047591         1493 QTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE---E----SLPDAVT--DVI 1562 (1624)
Q Consensus      1493 ~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~---~----~~~~~~~--~~~ 1562 (1624)
                      .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||......+. +.....   .    .++....  +..
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~  235 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ-LHFIFRILGTPTEETWPGILSNEEFK  235 (324)
T ss_dssp             ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred             cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHhchhhhcchhhc
Confidence            234578999999998765 5689999999999999999999999976432211 111110   0    0111000  000


Q ss_pred             hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1563 DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1563 d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ..................+...+.+++.+|++.||++|||++|+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH  282 (324)
T ss_dssp             HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            00000000011111223345678899999999999999999999863


No 196
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.7e-36  Score=373.04  Aligned_cols=269  Identities=20%  Similarity=0.287  Sum_probs=192.6

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcC-CCceeEEEeeeccCC--eeE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIR-HRNLAKIVSSCSNPG--FKA 1407 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~-HpNIv~l~g~~~~~~--~~~ 1407 (1624)
                      .++|...+.||+|+||+||+|... +|+.||||++...  .....+++.+|+.+++++. |||||++++++..++  ..+
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            467888899999999999999875 6889999988532  3445677889999999997 999999999987544  689


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      +|||||+ |+|.++++..  .+++..+..++.|+++||+|||+   .+|+||||||+|||++.++.+||+|||+|+....
T Consensus        88 lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  161 (388)
T 3oz6_A           88 LVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVN  161 (388)
T ss_dssp             EEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred             EEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence            9999998 6999999763  57889999999999999999996   7999999999999999999999999999987643


Q ss_pred             CC--------------------CccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhh
Q 047591         1488 VD--------------------SMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCL 1546 (1624)
Q Consensus      1488 ~~--------------------~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l 1546 (1624)
                      ..                    ....+..+||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+....+. +
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~  240 (388)
T 3oz6_A          162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ-L  240 (388)
T ss_dssp             CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-H
T ss_pred             cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H
Confidence            11                    111234579999999998865 6789999999999999999999999975432111 1


Q ss_pred             hhhhhh-cCChh----------HHHHHhh---h-------ccCCchHHHHH-----HHHHhHHHHHHHHHHccccCCCCC
Q 047591         1547 KHWVEE-SLPDA----------VTDVIDA---N-------LLSGEEEADIA-----AKKKCMSSVMSLALKCSEEIPEER 1600 (1624)
Q Consensus      1547 ~~~~~~-~~~~~----------~~~~~d~---~-------l~~~~~~~~~~-----~~~~~~~~~~~l~~~C~~~~P~~R 1600 (1624)
                      ...... ..|..          ....++.   .       ...........     ....++..+.+++.+|++.||++|
T Consensus       241 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R  320 (388)
T 3oz6_A          241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR  320 (388)
T ss_dssp             HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred             HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence            111110 00100          0000000   0       00000000000     001345678999999999999999


Q ss_pred             CCHHHHHHH
Q 047591         1601 MNVKDALAN 1609 (1624)
Q Consensus      1601 Pt~~evl~~ 1609 (1624)
                      ||++|+++.
T Consensus       321 ~t~~e~l~H  329 (388)
T 3oz6_A          321 ISANDALKH  329 (388)
T ss_dssp             CCHHHHTTS
T ss_pred             CCHHHHhCC
Confidence            999999864


No 197
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=8.3e-37  Score=357.69  Aligned_cols=252  Identities=29%  Similarity=0.413  Sum_probs=198.6

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccC-CeeEEEEEec
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNP-GFKALILQYM 1413 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~-~~~~lV~ey~ 1413 (1624)
                      ++|...+.||+|+||+||+|++ .|+.||||+++...  ..+.|.+|++++++++||||+++++++.+. +..++||||+
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~   97 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   97 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             hhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence            4677788999999999999987 48899999986433  457899999999999999999999987554 5789999999


Q ss_pred             CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcc
Q 047591         1414 PQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~ 1492 (1624)
                      ++|+|.+++.+.+ ..+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++.....    
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----  170 (278)
T 1byg_A           98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----  170 (278)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred             CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeecccccccccc----
Confidence            9999999997643 237889999999999999999996   79999999999999999999999999999865432    


Q ss_pred             ccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCch
Q 047591         1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEE 1571 (1624)
Q Consensus      1493 ~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 1571 (1624)
                      .....+|+.|+|||...+..++.++|||||||++|||+| |+.||......+.  ..            .+.......  
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~~------------~~~~~~~~~--  234 (278)
T 1byg_A          171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VP------------RVEKGYKMD--  234 (278)
T ss_dssp             -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--HH------------HHTTTCCCC--
T ss_pred             ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HH------------HHhcCCCCC--
Confidence            223457899999999988889999999999999999999 9999865322111  11            011000000  


Q ss_pred             HHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1572 EADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1572 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                           .+..++..+.+++.+||+.+|++|||+.|+++.|++++...
T Consensus       235 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~  275 (278)
T 1byg_A          235 -----APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE  275 (278)
T ss_dssp             -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             -----CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence                 01234566889999999999999999999999999998753


No 198
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.4e-36  Score=368.61  Aligned_cols=262  Identities=13%  Similarity=0.126  Sum_probs=205.2

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcC---------CceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeE----------
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFAD---------GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK---------- 1395 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~---------~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~---------- 1395 (1624)
                      ++|...+.||+|+||+||+|+...         ++.||||++...     +.+.+|++++++++|||||+          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            567888999999999999998763         788999998643     46889999999999999998          


Q ss_pred             -----EEeeecc-CCeeEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe
Q 047591         1396 -----IVSSCSN-PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL 1468 (1624)
Q Consensus      1396 -----l~g~~~~-~~~~~lV~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl 1468 (1624)
                           +++++.. .+..++||||+ +|+|.+++... +..+++.+++.|+.||+.||+|||+   .+|+||||||+|||+
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~  192 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFV  192 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEE
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEE
Confidence                 5666655 67889999999 99999999865 4578999999999999999999997   799999999999999


Q ss_pred             cCCC--cEEEeeecceeecCCCCCc------cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCC
Q 047591         1469 DDDM--VAHLGDFGIAKLLDGVDSM------KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMF 1540 (1624)
Q Consensus      1469 d~~~--~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~ 1540 (1624)
                      +.++  .+||+|||+|+.+......      ......||+.|+|||+..+..++.++|||||||++|||+||+.||....
T Consensus       193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  272 (352)
T 2jii_A          193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL  272 (352)
T ss_dssp             ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence            9998  9999999999876532211      1233479999999999998899999999999999999999999997543


Q ss_pred             ccchhhhhhhhhcCChhHHHHHhh--hccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1541 TGEVCLKHWVEESLPDAVTDVIDA--NLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1541 ~~~~~l~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                      .....+.....        .....  .+.....     ....++..+.+++.+||+.+|++|||++|+++.|+++..+..
T Consensus       273 ~~~~~~~~~~~--------~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          273 PNTEDIMKQKQ--------KFVDKPGPFVGPCG-----HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             TCHHHHHHHHH--------HHHHSCCCEECTTS-----CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             cCHHHHHHHHH--------hccCChhhhhhhcc-----ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence            22111111110        00000  0000000     001124568899999999999999999999999999877644


No 199
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=3.7e-36  Score=360.05  Aligned_cols=251  Identities=22%  Similarity=0.284  Sum_probs=204.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchh------hHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQED------RALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~------~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      +.|...+.||+|+||+||+|+.. +|+.||||++.....      ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            45777889999999999999876 588999999864322      13578999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCC----cEEEeeeccee
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDM----VAHLGDFGIAK 1483 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~----~~kl~DFGla~ 1483 (1624)
                      +||||+++|+|.+++... ..+++..+..++.|++.||+|||+   .+|+||||||+||+++.++    .+||+|||+++
T Consensus        92 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~  167 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (321)
T ss_dssp             EEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred             EEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence            999999999999999764 457899999999999999999996   7999999999999999888    79999999998


Q ss_pred             ecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHh
Q 047591         1484 LLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563 (1624)
Q Consensus      1484 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d 1563 (1624)
                      ......  ......||+.|+|||...+..++.++|||||||++|||+||+.||......+ .+.......          
T Consensus       168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~----------  234 (321)
T 2a2a_A          168 EIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANITSVS----------  234 (321)
T ss_dssp             ECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTC----------
T ss_pred             ecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhcc----------
Confidence            775432  2234569999999999988899999999999999999999999996532211 111111000          


Q ss_pred             hhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1564 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                         ....    ......++..+.+++.+|++.||++|||+.|+++.
T Consensus       235 ---~~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          235 ---YDFD----EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             ---CCCC----HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             ---cccC----hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence               0000    01112345668899999999999999999999873


No 200
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=2.5e-36  Score=354.61  Aligned_cols=252  Identities=21%  Similarity=0.321  Sum_probs=204.0

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      .++|...+.||+|+||+||+|... +++.||+|++....  ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            467888899999999999999875 58899999986442  345578899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc---EEEeeecceeecCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV---AHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~---~kl~DFGla~~~~~ 1487 (1624)
                      ||+++|+|.+++... ..+++.++..++.|++.||+|||+   .+|+||||||+||+++.++.   +||+|||++.....
T Consensus        85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  160 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  160 (284)
T ss_dssp             CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred             ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence            999999999988765 357899999999999999999996   79999999999999987655   99999999987654


Q ss_pred             CCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1488 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      ..  ......||+.|+|||...+..++.++|||||||++|||++|+.||....... .........            . 
T Consensus       161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~------------~-  224 (284)
T 3kk8_A          161 SE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIKAGA------------Y-  224 (284)
T ss_dssp             SC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTC------------C-
T ss_pred             Cc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-HHHHHHhcc------------c-
Confidence            32  2234579999999999999999999999999999999999999996532211 111111000            0 


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ....    .....++..+.+++.+|++.+|++|||+.|+++.
T Consensus       225 ~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          225 DYPS----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             CCCT----TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             cCCc----hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            0000    0011234567889999999999999999999873


No 201
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=1.1e-36  Score=365.68  Aligned_cols=258  Identities=28%  Similarity=0.465  Sum_probs=204.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCce--EEEEEeccc-hhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTN--AAIKIFSLQ-EDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~--vAvK~~~~~-~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      ++|...+.||+|+||+||+|+.. ++..  ||||.+... .....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            45667789999999999999875 4554  488988643 234456799999999999 999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcE
Q 047591         1410 LQYMPQGSLEKWLYSHN---------------YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVA 1474 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ 1474 (1624)
                      |||+++|+|.+++...+               ..+++.+++.++.|++.||+|||+   .+|+||||||+||+++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeE
Confidence            99999999999997653               468999999999999999999996   799999999999999999999


Q ss_pred             EEeeecceeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhc
Q 047591         1475 HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEES 1553 (1624)
Q Consensus      1475 kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~ 1553 (1624)
                      ||+|||+++....  ........+|+.|+|||+.....++.++|||||||++|||+| |+.||......+.  ..     
T Consensus       182 kL~Dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~--~~-----  252 (327)
T 1fvr_A          182 KIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL--YE-----  252 (327)
T ss_dssp             EECCTTCEESSCE--ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HH-----
T ss_pred             EEcccCcCccccc--cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH--HH-----
Confidence            9999999985432  112233467889999999988889999999999999999998 9999875422111  00     


Q ss_pred             CChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHh
Q 047591         1554 LPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618 (1624)
Q Consensus      1554 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~ 1618 (1624)
                             .+........       +..++..+.+++.+||+.+|++|||+.|+++.|+++..+..
T Consensus       253 -------~~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  303 (327)
T 1fvr_A          253 -------KLPQGYRLEK-------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  303 (327)
T ss_dssp             -------HGGGTCCCCC-------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             -------HhhcCCCCCC-------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence                   0110000000       01345568899999999999999999999999999876543


No 202
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=2.5e-36  Score=382.85  Aligned_cols=253  Identities=22%  Similarity=0.307  Sum_probs=204.7

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      .++|...++||+|+||+||+|+.. +|+.||||++....   ....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            356777889999999999999885 68999999986432   23456789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCC
Q 047591         1410 LQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      ||||++|+|.+++...+ ..+++..+..|+.||+.||+|||+   .+||||||||+|||++.++++||+|||+|+.....
T Consensus       263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~  339 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  339 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence            99999999999998654 348999999999999999999997   79999999999999999999999999999987543


Q ss_pred             CCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1489 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                      .  .....+||+.|||||++.+..++.++|||||||++|||+||+.||.........          ..+...+...-..
T Consensus       340 ~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~----------~~i~~~i~~~~~~  407 (576)
T 2acx_A          340 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR----------EEVERLVKEVPEE  407 (576)
T ss_dssp             C--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH----------HHHHHHHHHCCCC
T ss_pred             c--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH----------HHHHHHhhccccc
Confidence            2  223457999999999999889999999999999999999999999753221100          0111111100000


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERM-----NVKDALAN 1609 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----t~~evl~~ 1609 (1624)
                      -        +...+..+.+++.+|++.||++||     +++|++++
T Consensus       408 ~--------p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          408 Y--------SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             C--------CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             C--------CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence            0        012345678899999999999999     67888753


No 203
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=4.1e-36  Score=357.78  Aligned_cols=269  Identities=22%  Similarity=0.260  Sum_probs=200.5

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++....  ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            46778899999999999999886 58899999885432  3345778999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCc
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      |+++++|.+++... ..+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+|+....... 
T Consensus        83 ~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-  157 (311)
T 4agu_A           83 YCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-  157 (311)
T ss_dssp             CCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             eCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence            99999999987654 457899999999999999999996   7999999999999999999999999999987753322 


Q ss_pred             cccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhh--hhhhhhcCChhHHHHHhhh-cc
Q 047591         1492 KQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCL--KHWVEESLPDAVTDVIDAN-LL 1567 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l--~~~~~~~~~~~~~~~~d~~-l~ 1567 (1624)
                      ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||......+...  ..... ............. ..
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  236 (311)
T 4agu_A          158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG-DLIPRHQQVFSTNQYF  236 (311)
T ss_dssp             --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-SCCHHHHHHHHTCGGG
T ss_pred             ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhc-cccccccccccccccc
Confidence            2234579999999998765 678999999999999999999999997643222110  01111 1111111111100 00


Q ss_pred             C-----Cch--HHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1568 S-----GEE--EADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1568 ~-----~~~--~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .     ...  .........++..+.+++.+||+.||++|||++|+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            0     000  00011112356678899999999999999999999864


No 204
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=3.4e-36  Score=366.68  Aligned_cols=277  Identities=20%  Similarity=0.225  Sum_probs=205.0

Q ss_pred             CHHHHHHHhCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccch-----------hhHHHHHHHHHHHHHhcCCCcee
Q 047591         1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQE-----------DRALKSFDAECEVMRRIRHRNLA 1394 (1624)
Q Consensus      1326 ~~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~-----------~~~~~~f~~E~~~l~~l~HpNIv 1394 (1624)
                      ..+++....++|...+.||+|+||.||+|+..+|+.||||++....           ....+.+.+|++++++++||||+
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            3577888899999999999999999999998889999999885321           22347899999999999999999


Q ss_pred             EEEeeecc-----CCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEec
Q 047591         1395 KIVSSCSN-----PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLD 1469 (1624)
Q Consensus      1395 ~l~g~~~~-----~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld 1469 (1624)
                      ++++++..     ....++||||++ |+|.+++......+++..+..++.||+.||+|||+   .+|+||||||+|||++
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~  168 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLA  168 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEC
T ss_pred             ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEc
Confidence            99999843     346799999998 69999998777779999999999999999999997   7999999999999999


Q ss_pred             CCCcEEEeeecceeecCCCCCccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhh
Q 047591         1470 DDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKH 1548 (1624)
Q Consensus      1470 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~ 1548 (1624)
                      .++.+||+|||+|+......  ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||......+ .+..
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~  245 (362)
T 3pg1_A          169 DNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLNK  245 (362)
T ss_dssp             TTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred             CCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence            99999999999998654322  2334579999999998766 678999999999999999999999997643211 1111


Q ss_pred             hhhhcC-C----------hhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1549 WVEESL-P----------DAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1549 ~~~~~~-~----------~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .+.... +          ....+.+..................+...+.+++.+|++.||++|||+.|+++.
T Consensus       246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            111100 0          001111111111111111111122345678899999999999999999999863


No 205
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=3.4e-36  Score=355.50  Aligned_cols=250  Identities=25%  Similarity=0.369  Sum_probs=197.2

Q ss_pred             CCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEecC
Q 047591         1336 GFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMP 1414 (1624)
Q Consensus      1336 ~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~~ 1414 (1624)
                      .|....+||+|+||.||+|+.. +++.||||++........+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            4555669999999999999874 678899999876655566889999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC-CCcEEEeeecceeecCCCCCc
Q 047591         1415 QGSLEKWLYSHN--YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD-DMVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1415 ~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~-~~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      +|+|.+++....  ..+++..+..++.|++.||+|||+   .+|+||||||+||+++. ++.+||+|||+++....... 
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~-  178 (295)
T 2clq_A          103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-  178 (295)
T ss_dssp             EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred             CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-
Confidence            999999998653  346788889999999999999996   79999999999999997 89999999999987654321 


Q ss_pred             cccccccccccccccccCCC--CcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1492 KQTMTLATIGYMAPEYGSEG--IVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~~--~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                      ......||+.|+|||+....  .++.++|||||||++|||+||+.||.............            ........
T Consensus       179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~------------~~~~~~~~  246 (295)
T 2clq_A          179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV------------GMFKVHPE  246 (295)
T ss_dssp             --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH------------HHHCCCCC
T ss_pred             cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh------------cccccccc
Confidence            22345799999999987654  38899999999999999999999986432111110000            00000000


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      .       +..++..+.+++.+||+.+|++|||+.|+++
T Consensus       247 ~-------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          247 I-------PESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             C-------CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             c-------cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            0       0123456788999999999999999999986


No 206
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=4.8e-36  Score=376.44  Aligned_cols=263  Identities=17%  Similarity=0.221  Sum_probs=209.0

Q ss_pred             hCCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCC-ceeEEEeeeccCCeeEEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHR-NLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~Hp-NIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      .++|...++||+|+||+||+|+. .+++.||||++.....  .+++.+|+++++.++|+ +|..+..++.+.+..++|||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            35788889999999999999987 4689999998764332  24578999999999875 55566666677888999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe---cCCCcEEEeeecceeecCCC
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl---d~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      |+ +|+|.+++......+++.+++.|+.||+.||+|||+   .+||||||||+|||+   +.++.+||+|||+|+.+...
T Consensus        84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~  159 (483)
T 3sv0_A           84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT  159 (483)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence            99 999999998766779999999999999999999996   799999999999999   68899999999999987643


Q ss_pred             CCc------cccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHH
Q 047591         1489 DSM------KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVI 1562 (1624)
Q Consensus      1489 ~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1562 (1624)
                      ...      ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........          ...+.
T Consensus       160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~----------~~~i~  229 (483)
T 3sv0_A          160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK----------YEKIS  229 (483)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHH----------HHHHH
T ss_pred             ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHH----------HHHHh
Confidence            321      12245799999999999999999999999999999999999999976433211100          00111


Q ss_pred             hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1563 DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1563 d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      ........    ......++.++.+++.+||+.+|++||+++++++.|+++..+
T Consensus       230 ~~~~~~~~----~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~  279 (483)
T 3sv0_A          230 EKKVATSI----EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR  279 (483)
T ss_dssp             HHHHHSCH----HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             hccccccH----HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence            11110000    111134567889999999999999999999999999998664


No 207
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=3.3e-36  Score=377.16  Aligned_cols=246  Identities=24%  Similarity=0.384  Sum_probs=202.5

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++....   ....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            46777889999999999999886 68999999986432   223568999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++|+|.+++.+. ..+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+|+...... 
T Consensus        96 E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-  170 (476)
T 2y94_A           96 EYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-  170 (476)
T ss_dssp             ECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-
T ss_pred             eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccc-
Confidence            999999999999754 458999999999999999999996   799999999999999999999999999999875432 


Q ss_pred             ccccccccccccccccccCCCCc-CcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~-~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                       .....+||+.|+|||++.+..+ +.++|||||||++|||+||+.||++...... .            ..+.+... ..
T Consensus       171 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-~------------~~i~~~~~-~~  235 (476)
T 2y94_A          171 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL-F------------KKICDGIF-YT  235 (476)
T ss_dssp             -CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH-H------------HHHHTTCC-CC
T ss_pred             -cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH-H------------HHHhcCCc-CC
Confidence             2334579999999999887665 7899999999999999999999975322111 1            11111110 00


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      .        ..+...+.+++.+|++.||++|||++|+++
T Consensus       236 p--------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          236 P--------QYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             C--------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             C--------ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            0        123446788999999999999999999986


No 208
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=9.9e-37  Score=365.76  Aligned_cols=251  Identities=33%  Similarity=0.541  Sum_probs=207.4

Q ss_pred             cchhccccCHHHHHhhcCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeee
Q 047591          727 SLATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKI  805 (1624)
Q Consensus       727 ~~~~~~~~~~~el~~~t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l  805 (1624)
                      .......+++++++.++++|+..+.||+|+||+||+|+..+|+.||||++..... .....|.+|++++++++||||+++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   92 (326)
T 3uim_A           13 HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL   92 (326)
T ss_dssp             --CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred             ccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence            3344568999999999999999999999999999999988899999999875432 233478999999999999999999


Q ss_pred             eeeeccCCeEEEEEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCc
Q 047591          806 ISSCSNHGFKALILEYMPQGSLEKWLYSHK---YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV  882 (1624)
Q Consensus       806 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~  882 (1624)
                      +++|.+.+..++||||+++|+|.++++...   ..+++..+..|+.|++.||+|||+.+..+|+||||||+|||+++++.
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~  172 (326)
T 3uim_A           93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE  172 (326)
T ss_dssp             CEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCC
T ss_pred             EEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCC
Confidence            999999999999999999999999998653   24899999999999999999999975557999999999999999999


Q ss_pred             eEEEeeeeeeccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc---CcCcchHHHHH
Q 047591          883 AHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM---FTGETSLKKWV  959 (1624)
Q Consensus       883 ~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~---~~~~~~l~~~~  959 (1624)
                      +||+|||+++..............||+.|+|||++..+.++.++|||||||++|||+||+.||+..   .........|+
T Consensus       173 ~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  252 (326)
T 3uim_A          173 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV  252 (326)
T ss_dssp             EEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred             EEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence            999999999987655444445556999999999988888999999999999999999999999632   12234455666


Q ss_pred             HHHhhhh-hhhccchhccC
Q 047591          960 EESLRLA-VTEVVDAELLS  977 (1624)
Q Consensus       960 ~~~~~~~-~~~~~d~~Ll~  977 (1624)
                      ....... ...+++..+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~  271 (326)
T 3uim_A          253 KGLLKEKKLEALVDVDLQG  271 (326)
T ss_dssp             TTTTSSCCSTTSSCTTCTT
T ss_pred             HHHhhchhhhhhcChhhcc
Confidence            5443332 44555554443


No 209
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=4.6e-36  Score=369.88  Aligned_cols=250  Identities=22%  Similarity=0.281  Sum_probs=188.9

Q ss_pred             CCCcC-CeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHh-cCCCceeEEEeeecc----CCeeEE
Q 047591         1336 GFSES-NLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRR-IRHRNLAKIVSSCSN----PGFKAL 1408 (1624)
Q Consensus      1336 ~f~~~-~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~-l~HpNIv~l~g~~~~----~~~~~l 1408 (1624)
                      +|... ++||+|+||+||+|+.. +++.||||+++..     ..+.+|++++.+ .+||||+++++++..    .+..++
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            44443 68999999999999875 5889999998632     356788888754 589999999998864    567899


Q ss_pred             EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC---CCcEEEeeecceee
Q 047591         1409 ILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKL 1484 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~---~~~~kl~DFGla~~ 1484 (1624)
                      |||||++|+|.+++...+ ..+++.++..|+.||+.||+|||+   .+|+||||||+|||++.   ++.+||+|||+|+.
T Consensus       137 v~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~  213 (400)
T 1nxk_A          137 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  213 (400)
T ss_dssp             EEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccc
Confidence            999999999999998653 468999999999999999999996   79999999999999997   78999999999987


Q ss_pred             cCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhh
Q 047591         1485 LDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDA 1564 (1624)
Q Consensus      1485 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 1564 (1624)
                      .....  .....+||+.|||||++.+..++.++|||||||++|||+||+.||.........         +.....+...
T Consensus       214 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---------~~~~~~i~~~  282 (400)
T 1nxk_A          214 TTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---------PGMKTRIRMG  282 (400)
T ss_dssp             CC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC---------CSHHHHHHHT
T ss_pred             cCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc---------HHHHHHHHcC
Confidence            64322  233467999999999999999999999999999999999999999653221110         0000001000


Q ss_pred             hccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1565 NLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1565 ~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ......     ..+..++..+.+++.+||+.||++|||+.|+++.
T Consensus       283 ~~~~~~-----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          283 QYEFPN-----PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             CCCCCT-----TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cccCCC-----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            000000     0012345668899999999999999999999874


No 210
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=4.3e-36  Score=376.81  Aligned_cols=266  Identities=24%  Similarity=0.267  Sum_probs=195.8

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccC------C
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNP------G 1404 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~------~ 1404 (1624)
                      .++|...+.||+|+||+||+|+.. +++.||||++...  .....+++.+|++++++++|||||++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            467888899999999999999875 5889999998643  344567899999999999999999999998654      4


Q ss_pred             eeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceee
Q 047591         1405 FKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKL 1484 (1624)
Q Consensus      1405 ~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~ 1484 (1624)
                      ..++|||||+++ +.+.+..   .+++.++..++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+|+.
T Consensus       141 ~~~lv~E~~~~~-l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~  213 (464)
T 3ttj_A          141 DVYLVMELMDAN-LCQVIQM---ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART  213 (464)
T ss_dssp             EEEEEEECCSEE-HHHHHTS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred             eEEEEEeCCCCC-HHHHHhh---cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence            579999999864 6666643   37899999999999999999996   7999999999999999999999999999987


Q ss_pred             cCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhh----------hcC
Q 047591         1485 LDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE----------ESL 1554 (1624)
Q Consensus      1485 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~----------~~~ 1554 (1624)
                      ....  ...+..+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+....+. +...+.          ...
T Consensus       214 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~-~~~i~~~lg~p~~~~~~~~  290 (464)
T 3ttj_A          214 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKL  290 (464)
T ss_dssp             ---C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCSCCHHHHTTS
T ss_pred             cCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHHc
Confidence            6532  233456899999999999999999999999999999999999999975422111 111111          001


Q ss_pred             ChhHHHHHhhhcc-CCch----------HHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1555 PDAVTDVIDANLL-SGEE----------EADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1555 ~~~~~~~~d~~l~-~~~~----------~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .......++.... ....          .............+.+++.+|++.||++|||++|+++.
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            1111111110000 0000          00001112235678999999999999999999999874


No 211
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=1.8e-36  Score=360.40  Aligned_cols=270  Identities=24%  Similarity=0.316  Sum_probs=199.7

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccch-----hhHHHHHHHHHHHHHhcC---CCceeEEEeeeccC
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQE-----DRALKSFDAECEVMRRIR---HRNLAKIVSSCSNP 1403 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~-----~~~~~~f~~E~~~l~~l~---HpNIv~l~g~~~~~ 1403 (1624)
                      .+++|...+.||+|+||+||+|+. .+++.||||++....     ......+.+|++++++++   ||||++++++|...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            457899999999999999999987 468899999986432     122356777888877765   99999999999765


Q ss_pred             C-----eeEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEe
Q 047591         1404 G-----FKALILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLG 1477 (1624)
Q Consensus      1404 ~-----~~~lV~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~ 1477 (1624)
                      .     ..++||||++ |+|.+++.... ..+++.++..|+.|++.||+|||+   .+|+||||||+|||++.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEEC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEe
Confidence            4     4789999997 69999998654 348999999999999999999997   789999999999999999999999


Q ss_pred             eecceeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhc-CC-
Q 047591         1478 DFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEES-LP- 1555 (1624)
Q Consensus      1478 DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~-~~- 1555 (1624)
                      |||+|+......  ......||+.|||||++.+..++.++|||||||++|||+||+.||......+. +....... .+ 
T Consensus       163 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~  239 (308)
T 3g33_A          163 DFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIFDLIGLPP  239 (308)
T ss_dssp             SCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH-HHHHHHHHCCCC
T ss_pred             eCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCC
Confidence            999998664322  23446799999999999888999999999999999999999999975432211 11111100 00 


Q ss_pred             -hhHHHHH---hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1556 -DAVTDVI---DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1556 -~~~~~~~---d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                       +.+....   ..................+...+.+++.+|++.||++|||+.|+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence             0000000   00000000000011112345678899999999999999999999863


No 212
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=2.1e-36  Score=355.70  Aligned_cols=249  Identities=25%  Similarity=0.324  Sum_probs=195.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      +.|...+.||+|+||+||+|+.. ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            35677789999999999999875 58899999986543 33467899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe---cCCCcEEEeeecceeecC
Q 047591         1413 MPQGSLEKWLYSH---NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl---d~~~~~kl~DFGla~~~~ 1486 (1624)
                      +++|+|.+++...   +..+++..+..|+.|+++||+|||+   .+|+||||||+||++   +.++.+||+|||+|+...
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            9999999998643   4668999999999999999999996   799999999999999   456889999999998764


Q ss_pred             CCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhc
Q 047591         1487 GVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANL 1566 (1624)
Q Consensus      1487 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 1566 (1624)
                      ...  ......||+.|+|||.+. +.++.++|||||||++|||+||+.||......+.  ........+         ..
T Consensus       179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~--~~~~~~~~~---------~~  244 (285)
T 3is5_A          179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV--QQKATYKEP---------NY  244 (285)
T ss_dssp             ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHCCC---------CC
T ss_pred             Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH--HhhhccCCc---------cc
Confidence            322  233457999999999875 5689999999999999999999999975422111  110000000         00


Q ss_pred             cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1567 LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1567 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      .. .       ....+..+.+++.+|++.||++|||+.|+++
T Consensus       245 ~~-~-------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          245 AV-E-------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             CC----------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             cc-c-------cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            00 0       0112456778999999999999999999985


No 213
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.4e-36  Score=374.46  Aligned_cols=277  Identities=22%  Similarity=0.314  Sum_probs=207.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC--eeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG--FKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~--~~~lV~ 1410 (1624)
                      +.|...++||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++...+  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            45777889999999999999886 48899999987433 334577889999999999999999999987655  679999


Q ss_pred             EecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe----cCCCcEEEeeecceee
Q 047591         1411 QYMPQGSLEKWLYSHN--YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL----DDDMVAHLGDFGIAKL 1484 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl----d~~~~~kl~DFGla~~ 1484 (1624)
                      ||+++|+|.+++....  ..+++..+..++.||+.||+|||+   .+|+||||||+|||+    +.++.+||+|||+|+.
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence            9999999999997543  338999999999999999999996   799999999999999    8888999999999998


Q ss_pred             cCCCCCccccccccccccccccccCC--------CCcCcccchHHHHHHHHHHHcCCCCCCCCCccc---hhhhhhhhhc
Q 047591         1485 LDGVDSMKQTMTLATIGYMAPEYGSE--------GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE---VCLKHWVEES 1553 (1624)
Q Consensus      1485 ~~~~~~~~~~~~~gt~~y~APE~~~~--------~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~---~~l~~~~~~~ 1553 (1624)
                      .....  ......||+.|+|||++..        ..++.++|||||||++|||+||+.||.......   ..+.......
T Consensus       166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~  243 (396)
T 4eut_A          166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (396)
T ss_dssp             CCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred             ccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence            75432  2234579999999998754        568899999999999999999999986432111   1111111111


Q ss_pred             CChhHHHH---Hhhhc-cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1554 LPDAVTDV---IDANL-LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1554 ~~~~~~~~---~d~~l-~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      .+..+..+   .+... ..................+.+++.+|++.||++|||++|+++.++++..+
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            00000000   00000 00000000001134456788999999999999999999999999887553


No 214
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=2.4e-36  Score=363.77  Aligned_cols=255  Identities=22%  Similarity=0.299  Sum_probs=188.6

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcC-CCceeEEEeee--------ccC
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIR-HRNLAKIVSSC--------SNP 1403 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~-HpNIv~l~g~~--------~~~ 1403 (1624)
                      ..+|...++||+|+||+||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++        ...
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            346777889999999999999875 68899999986666666788999999999996 99999999998        334


Q ss_pred             CeeEEEEEecCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCc--eEEcCCCCCcEEecCCCcEEEeee
Q 047591         1404 GFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIMIDVACALEYLHQGYSTS--IIHCDLKPSNVLLDDDMVAHLGDF 1479 (1624)
Q Consensus      1404 ~~~~lV~ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~--iiHrDlK~~NILld~~~~~kl~DF 1479 (1624)
                      ...++||||+. |+|.+++..  ....+++.++..|+.||+.||+|||+   .+  |+||||||+|||++.++.+||+||
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Df  182 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDF  182 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecC
Confidence            45799999996 799998874  34568999999999999999999996   56  999999999999999999999999


Q ss_pred             cceeecCCCCCc-----------ccccccccccccccccc---CCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchh
Q 047591         1480 GIAKLLDGVDSM-----------KQTMTLATIGYMAPEYG---SEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVC 1545 (1624)
Q Consensus      1480 Gla~~~~~~~~~-----------~~~~~~gt~~y~APE~~---~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~ 1545 (1624)
                      |+++........           ......||+.|+|||++   .+..++.++|||||||++|||+||+.||........ 
T Consensus       183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-  261 (337)
T 3ll6_A          183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI-  261 (337)
T ss_dssp             TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred             ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh-
Confidence            999876532211           11134699999999987   567789999999999999999999999864321110 


Q ss_pred             hhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1546 LKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1546 l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                          .....            ....       ...+...+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus       262 ----~~~~~------------~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          262 ----VNGKY------------SIPP-------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             --------C------------CCCT-------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----hcCcc------------cCCc-------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence                00000            0000       001123467789999999999999999999999998764


No 215
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=4.3e-36  Score=351.79  Aligned_cols=247  Identities=23%  Similarity=0.338  Sum_probs=199.2

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      .++|...+.||+|+||+||+|+.. +++.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            456778899999999999999876 46789999985432   22356789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC
Q 047591         1410 LQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~ 1489 (1624)
                      |||+++|+|.+++.... .+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||++...... 
T Consensus        88 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-  162 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-  162 (279)
T ss_dssp             ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred             EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCcc-
Confidence            99999999999997653 57899999999999999999995   79999999999999999999999999998654322 


Q ss_pred             CccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1490 SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1490 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                        ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+. ...            +..... ..
T Consensus       163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~------------~~~~~~-~~  226 (279)
T 3fdn_A          163 --RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKR------------ISRVEF-TF  226 (279)
T ss_dssp             -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHH------------HHHTCC-CC
T ss_pred             --cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH-HHH------------HHhCCC-CC
Confidence              22345799999999999988999999999999999999999999975321111 000            000000 00


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .        ..++..+.+++.+|++.+|++|||++|+++.
T Consensus       227 ~--------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          227 P--------DFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             C--------TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             C--------CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            0        1134557789999999999999999999974


No 216
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=6.6e-37  Score=379.76  Aligned_cols=211  Identities=22%  Similarity=0.321  Sum_probs=186.1

Q ss_pred             cCHHHHHhhcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeee
Q 047591          734 ISYQELQRLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSC  809 (1624)
Q Consensus       734 ~~~~el~~~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~  809 (1624)
                      +.++++...+++|...++||+|+||+||+|+.. +++.||||++....   ....+.+.+|+.++++++|||||+++++|
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            455677778899999999999999999999975 57899999997432   12234588999999999999999999999


Q ss_pred             ccCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeee
Q 047591          810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFG  889 (1624)
Q Consensus       810 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFG  889 (1624)
                      .+.+..|+|||||++|+|.+++......+++..+..|+.|++.||+|||+.   +||||||||+|||+|.++.+||+|||
T Consensus       144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFG  220 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG  220 (437)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             eeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchh
Confidence            999999999999999999999987666799999999999999999999984   59999999999999999999999999


Q ss_pred             eeeccCCCCCcccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          890 ISKLLDGEDSVTQTMTLATFGYMAPEYGS-----EGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       890 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      +|+.............+||+.|||||++.     .+.++.++|||||||++|||+||+.||..
T Consensus       221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~  283 (437)
T 4aw2_A          221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA  283 (437)
T ss_dssp             TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence            99877655444444568999999999876     56789999999999999999999999964


No 217
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=3.1e-36  Score=352.24  Aligned_cols=246  Identities=22%  Similarity=0.371  Sum_probs=179.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc---hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||+|++...   .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (275)
T 2eue_A           13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence            57888899999999999999864 6889999998643   2234568899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+ +|++.+++... ..+++.++.+++.|++.||+|||+   .+|+||||||+||++++++.+||+|||+++...... 
T Consensus        93 e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  166 (275)
T 2eue_A           93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-  166 (275)
T ss_dssp             ECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred             hhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCcc-
Confidence            999 77888888764 358999999999999999999996   799999999999999999999999999998764332 


Q ss_pred             ccccccccccccccccccCCCCc-CcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~-~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                       ......||+.|+|||...+..+ +.++|||||||++|||+||+.||+....... ..             .+.......
T Consensus       167 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~-------------~~~~~~~~~  231 (275)
T 2eue_A          167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL-FK-------------NISNGVYTL  231 (275)
T ss_dssp             ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH-------------HHHHTCCCC
T ss_pred             -cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HH-------------HHHhCCCCC
Confidence             2233469999999999877665 7899999999999999999999975321110 00             011010000


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .        ..++..+.+++.+|++.||++|||++|+++.
T Consensus       232 ~--------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  263 (275)
T 2eue_A          232 P--------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             C--------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             C--------ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence            0        1234567889999999999999999999863


No 218
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=1.6e-36  Score=356.13  Aligned_cols=250  Identities=26%  Similarity=0.420  Sum_probs=202.5

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeecc-----------
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN----------- 1402 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~----------- 1402 (1624)
                      ++|...+.||+|+||.||+|+.. +++.||||++....    +.+.+|++++++++||||+++++++..           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            35777889999999999999886 68999999986543    356789999999999999999998754           


Q ss_pred             -----CCeeEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEE
Q 047591         1403 -----PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHL 1476 (1624)
Q Consensus      1403 -----~~~~~lV~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl 1476 (1624)
                           ....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+   .+|+||||||+||++++++.+||
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl  163 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKI  163 (284)
T ss_dssp             --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEE
T ss_pred             ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEEE
Confidence                 34579999999999999999754 3568999999999999999999996   79999999999999999999999


Q ss_pred             eeecceeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCCh
Q 047591         1477 GDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPD 1556 (1624)
Q Consensus      1477 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~ 1556 (1624)
                      +|||+++......  ......||+.|+|||...+..++.++|||||||++|||+||+.|+...    .   .+       
T Consensus       164 ~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~---~~-------  227 (284)
T 2a19_B          164 GDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----S---KF-------  227 (284)
T ss_dssp             CCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----H---HH-------
T ss_pred             Ccchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----H---HH-------
Confidence            9999998775432  233456999999999998888999999999999999999999886321    0   00       


Q ss_pred             hHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 047591         1557 AVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFLK 1619 (1624)
Q Consensus      1557 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~~~ 1619 (1624)
                       ..+ +......          ..++..+.+++.+||+.||++|||+.|+++.|+.++....+
T Consensus       228 -~~~-~~~~~~~----------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~  278 (284)
T 2a19_B          228 -FTD-LRDGIIS----------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK  278 (284)
T ss_dssp             -HHH-HHTTCCC----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred             -HHH-hhccccc----------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence             000 1111111          11234567899999999999999999999999988765443


No 219
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=1.1e-36  Score=381.69  Aligned_cols=250  Identities=22%  Similarity=0.279  Sum_probs=193.6

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc---hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||++...   .....+.+.+|++++++++||||++++++|.+.+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            356888899999999999999875 6889999998643   223456788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC
Q 047591         1410 LQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~ 1489 (1624)
                      ||||++|+|.+++...+ .+++..+..++.||++||+|||+  ..+||||||||+|||++.++.+||+|||+|+......
T Consensus       227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred             EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence            99999999999997653 57899999999999999999995  2689999999999999999999999999998643222


Q ss_pred             CccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1490 SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1490 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                       ......+||+.|||||++.+..++.++|||||||++|||+||+.||........ ..            .+...... .
T Consensus       304 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~------------~i~~~~~~-~  368 (446)
T 4ejn_A          304 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-FE------------LILMEEIR-F  368 (446)
T ss_dssp             ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH------------HHHHCCCC-C
T ss_pred             -cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH-HH------------HHHhCCCC-C
Confidence             223446799999999999999999999999999999999999999965321110 00            01111100 0


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERM-----NVKDALAN 1609 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----t~~evl~~ 1609 (1624)
                              +..++..+.+++.+|++.||++||     |++|+++.
T Consensus       369 --------p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          369 --------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             --------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             --------CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence                    012345678899999999999999     99999863


No 220
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=8.1e-36  Score=363.47  Aligned_cols=257  Identities=24%  Similarity=0.380  Sum_probs=205.9

Q ss_pred             HHHHHHhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--------hhHHHHHHHHHHHHHhc-CCCceeEEE
Q 047591         1328 QELRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--------DRALKSFDAECEVMRRI-RHRNLAKIV 1397 (1624)
Q Consensus      1328 ~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--------~~~~~~f~~E~~~l~~l-~HpNIv~l~ 1397 (1624)
                      .......++|...+.||+|+||.||+|+.. +|+.||||+++...        ....+.+.+|+.+++++ +||||++++
T Consensus        87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~  166 (365)
T 2y7j_A           87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI  166 (365)
T ss_dssp             HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence            333444567888899999999999999985 68999999986432        12356789999999999 799999999


Q ss_pred             eeeccCCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEe
Q 047591         1398 SSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLG 1477 (1624)
Q Consensus      1398 g~~~~~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~ 1477 (1624)
                      +++...+..++||||+++|+|.+++... ..+++..+..++.||+.||+|||+   .+|+||||||+||+++.++.+||+
T Consensus       167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~  242 (365)
T 2y7j_A          167 DSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLS  242 (365)
T ss_dssp             EEEEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEEC
T ss_pred             EEEeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEE
Confidence            9999999999999999999999999754 358999999999999999999996   799999999999999999999999


Q ss_pred             eecceeecCCCCCccccccccccccccccccC------CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhh
Q 047591         1478 DFGIAKLLDGVDSMKQTMTLATIGYMAPEYGS------EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551 (1624)
Q Consensus      1478 DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~------~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~ 1551 (1624)
                      |||+++.+....  ......||+.|+|||++.      ...++.++|||||||++|||+||+.||...... ..+..   
T Consensus       243 DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~---  316 (365)
T 2y7j_A          243 DFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-LMLRM---  316 (365)
T ss_dssp             CCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH---
T ss_pred             ecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-HHHHH---
Confidence            999998875432  233457999999999875      336899999999999999999999999653211 11111   


Q ss_pred             hcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1552 ESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1552 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                               +..... ..    ....+..++..+.+++.+|++.||++|||+.|+++
T Consensus       317 ---------i~~~~~-~~----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          317 ---------IMEGQY-QF----SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             ---------HHHTCC-CC----CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ---------HHhCCC-CC----CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                     111000 00    01112234566889999999999999999999986


No 221
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=8.7e-37  Score=373.21  Aligned_cols=264  Identities=13%  Similarity=0.129  Sum_probs=188.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhc--CCCceeEEEe-------eec
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRI--RHRNLAKIVS-------SCS 1401 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l--~HpNIv~l~g-------~~~ 1401 (1624)
                      ..|...+.||+|+||+||+|++. +++.||||++....   ....+.+.+|+++++.+  +||||++++.       ++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            34777889999999999999875 68899999997532   34566788886655555  6999888653       332


Q ss_pred             cC-----------------CeeEEEEEecCCCCHHHHHHhcCCCCCHHHH------HHHHHHHHHHHHHhhhcCCCceEE
Q 047591         1402 NP-----------------GFKALILQYMPQGSLEKWLYSHNYLLNIEQR------LDIMIDVACALEYLHQGYSTSIIH 1458 (1624)
Q Consensus      1402 ~~-----------------~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~------~~i~~~ia~gl~yLH~~~~~~iiH 1458 (1624)
                      .+                 ...++|||||+ |+|.+++...+..+++..+      ..++.||++||+|||+   .+|||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivH  217 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVH  217 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCcc
Confidence            22                 33799999999 8999999875555566777      7888999999999996   79999


Q ss_pred             cCCCCCcEEecCCCcEEEeeecceeecCCCCCccccccccccccccccccCC--CCcCcccchHHHHHHHHHHHcCCCCC
Q 047591         1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSE--GIVSTSGDVYSFGILMMETLTRRKPT 1536 (1624)
Q Consensus      1459 rDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DV~SfGvil~Elltg~~P~ 1536 (1624)
                      |||||+|||++.++.+||+|||+|+.....    .....||+.|||||++.+  ..++.++|||||||++|||+||+.||
T Consensus       218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf  293 (371)
T 3q60_A          218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF  293 (371)
T ss_dssp             TTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred             CcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999976432    113467799999999877  78999999999999999999999999


Q ss_pred             CCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH--HHHHHH
Q 047591         1537 DDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA--NLKKIK 1614 (1624)
Q Consensus      1537 ~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~--~L~~i~ 1614 (1624)
                      .........  .|........    ......       ......++..+.+++.+||+.||++|||+.|+++  .++++.
T Consensus       294 ~~~~~~~~~--~~~~~~~~~~----~~~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  360 (371)
T 3q60_A          294 GLVTPGIKG--SWKRPSLRVP----GTDSLA-------FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ  360 (371)
T ss_dssp             TBCCTTCTT--CCCBCCTTSC----CCCSCC-------CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred             CCcCccccc--chhhhhhhhc----cccccc-------hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence            764322110  1110000000    000000       0000133556888999999999999999999985  456655


Q ss_pred             HHHhh
Q 047591         1615 TKFLK 1619 (1624)
Q Consensus      1615 ~~~~~ 1619 (1624)
                      .....
T Consensus       361 ~~~~~  365 (371)
T 3q60_A          361 NEISS  365 (371)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            54443


No 222
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=2.1e-36  Score=358.69  Aligned_cols=251  Identities=24%  Similarity=0.330  Sum_probs=198.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      +.|...+.||+|+||+||+|+.. +++.||+|++........+.|.+|++++++++||||+++++++..++..++||||+
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   98 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC   98 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence            46777889999999999999986 58899999987665556788999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCccc
Q 047591         1414 PQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQ 1493 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 1493 (1624)
                      ++|+|.+++......+++.++..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||++...... ....
T Consensus        99 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~  174 (302)
T 2j7t_A           99 PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQKR  174 (302)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC-
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCcccccc-cccc
Confidence            9999999998766678999999999999999999996   79999999999999999999999999997643211 1112


Q ss_pred             ccccccccccccccc-----CCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1494 TMTLATIGYMAPEYG-----SEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1494 ~~~~gt~~y~APE~~-----~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                      ....||+.|+|||+.     ....++.++|||||||++|||+||+.||........ .........+.         . .
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~---------~-~  243 (302)
T 2j7t_A          175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LLKIAKSDPPT---------L-L  243 (302)
T ss_dssp             ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSCCCC---------C-S
T ss_pred             ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-HHHHhccCCcc---------c-C
Confidence            234699999999987     467789999999999999999999999875422111 11111110000         0 0


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                              .+..++..+.+++.+||+.+|++|||+.|+++
T Consensus       244 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          244 --------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             --------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             --------CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                    01223456788999999999999999999986


No 223
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=3.4e-36  Score=366.15  Aligned_cols=253  Identities=19%  Similarity=0.234  Sum_probs=191.6

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      .++|...+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|+.++++++|||||++++++.+++..++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            356888899999999999999886 68899999986432 2346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc--EEEeeecceeecCCCCC
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV--AHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~--~kl~DFGla~~~~~~~~ 1490 (1624)
                      +++|+|.+++...+ .+++..+..++.|+++||+|||+   .+|+||||||+|||++.++.  +||+|||+|+.....  
T Consensus        98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~--  171 (361)
T 3uc3_A           98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--  171 (361)
T ss_dssp             CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred             CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence            99999999997644 58899999999999999999996   79999999999999987765  999999999854322  


Q ss_pred             ccccccccccccccccccCCCCcCcc-cchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTS-GDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k-~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                      .......||+.|+|||++.+..++.+ +|||||||++|||+||+.||......... ...        ...+....... 
T Consensus       172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-~~~--------~~~~~~~~~~~-  241 (361)
T 3uc3_A          172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY-RKT--------IQRILSVKYSI-  241 (361)
T ss_dssp             ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH-HHH--------HHHHHTTCCCC-
T ss_pred             CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH-HHH--------HHHHhcCCCCC-
Confidence            12234579999999999877777655 89999999999999999999753221111 110        01111111000 


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ..      ...++..+.+++.+||+.+|++|||+.|+++.
T Consensus       242 ~~------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          242 PD------DIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             CT------TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CC------cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            00      01234567889999999999999999999864


No 224
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=5.1e-36  Score=351.76  Aligned_cols=257  Identities=23%  Similarity=0.311  Sum_probs=204.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchh------hHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQED------RALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~------~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||+++....      ...+.|.+|++++++++||||+++++++.+.+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            35777889999999999999886 689999999864321      13578999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCC----cEEEeeeccee
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDM----VAHLGDFGIAK 1483 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~----~~kl~DFGla~ 1483 (1624)
                      +||||+++++|.+++... ..+++.++..++.|++.||+|||+   .+|+||||||+||+++.++    .+||+|||+++
T Consensus        85 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~  160 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH  160 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence            999999999999999764 357999999999999999999996   7999999999999999877    89999999998


Q ss_pred             ecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHh
Q 047591         1484 LLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563 (1624)
Q Consensus      1484 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d 1563 (1624)
                      ......  ......||+.|+|||+.....++.++|||||||++|||+||+.||......+ ....+....          
T Consensus       161 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~----------  227 (283)
T 3bhy_A          161 KIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TLTNISAVN----------  227 (283)
T ss_dssp             ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTC----------
T ss_pred             eccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HHHHhHhcc----------
Confidence            765332  2234569999999999988899999999999999999999999997532211 111110000          


Q ss_pred             hhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH--HHHHHHH
Q 047591         1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA--NLKKIKT 1615 (1624)
Q Consensus      1564 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~--~L~~i~~ 1615 (1624)
                         ...    .......++..+.+++.+|++.+|++|||+.|+++  .++.++.
T Consensus       228 ---~~~----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  274 (283)
T 3bhy_A          228 ---YDF----DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR  274 (283)
T ss_dssp             ---CCC----CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred             ---cCC----cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence               000    01112234566889999999999999999999997  3555543


No 225
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=1.3e-36  Score=358.15  Aligned_cols=258  Identities=22%  Similarity=0.348  Sum_probs=197.6

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc--CCc--eEEEEEeccc---hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA--DGT--NAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~--~~~--~vAvK~~~~~---~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      ++|...+.||+|+||+||+|++.  +++  .||||+++..   .....+.|.+|++++++++||||+++++++.+++ .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            45777789999999999999864  233  5899988643   2345678999999999999999999999997765 78


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      +||||+++|+|.+++......+++.++.+++.|+++||+|||+   .+|+||||||+||+++.++.+||+|||+++....
T Consensus        97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  173 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  173 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence            9999999999999998766678999999999999999999996   7999999999999999999999999999988754


Q ss_pred             CCCc--cccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhh
Q 047591         1488 VDSM--KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDA 1564 (1624)
Q Consensus      1488 ~~~~--~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 1564 (1624)
                      ....  ......+|+.|+|||+..+..++.++|||||||++|||+| |+.||......+ .....            ...
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~------------~~~  240 (291)
T 1u46_A          174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-ILHKI------------DKE  240 (291)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHH------------HTS
T ss_pred             cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH-HHHHH------------Hcc
Confidence            3321  1223467889999999988889999999999999999999 999987542211 11110            000


Q ss_pred             hccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1565 NLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1565 ~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      .....       ....++..+.+++.+||+.+|++|||+.|+++.|++++..
T Consensus       241 ~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  285 (291)
T 1u46_A          241 GERLP-------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT  285 (291)
T ss_dssp             CCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             CCCCC-------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence            00000       0123456788999999999999999999999999987543


No 226
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=3.4e-36  Score=351.77  Aligned_cols=251  Identities=23%  Similarity=0.313  Sum_probs=203.8

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      ++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            45777889999999999999886 68899999986443 34467899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC-Cc
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD-SM 1491 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~-~~ 1491 (1624)
                      +++|+|.+++... ..+++.++..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus        87 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  162 (276)
T 2yex_A           87 CSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (276)
T ss_dssp             CTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             cCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence            9999999988643 457899999999999999999996   799999999999999999999999999998764322 11


Q ss_pred             cccccccccccccccccCCCCc-CcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1492 KQTMTLATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~~~~-~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                      ......||+.|+|||...+..+ +.++|||||||++|||+||+.||+...........|......           ..  
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----------~~--  229 (276)
T 2yex_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-----------LN--  229 (276)
T ss_dssp             CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT-----------ST--
T ss_pred             cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc-----------cC--
Confidence            2234579999999999877665 789999999999999999999997643332223333221100           00  


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                            ....++..+.+++.+|++.+|++|||++|+++
T Consensus       230 ------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          230 ------PWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             ------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence                  01123456788999999999999999999986


No 227
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=2.6e-36  Score=393.74  Aligned_cols=259  Identities=23%  Similarity=0.368  Sum_probs=206.8

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEcC----CceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeE
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFAD----GTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~~----~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      ..+.|...+.||+|+||+||+|++..    +..||||+++.. .....+.|.+|+.++++++|||||++++++. ++..+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence            34567778899999999999998743    456899988643 3345578999999999999999999999985 45689


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      +||||+++|+|.+++...+..+++..++.++.|+++||+|||+   .+|+||||||+|||++.++.+||+|||+|+....
T Consensus       467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~  543 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  543 (656)
T ss_dssp             EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred             EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence            9999999999999998777779999999999999999999996   7999999999999999999999999999987754


Q ss_pred             CCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhc
Q 047591         1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANL 1566 (1624)
Q Consensus      1488 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 1566 (1624)
                      ..........||+.|||||++....++.++|||||||++|||++ |+.||.+....+.  ...           +.+...
T Consensus       544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~~~-----------i~~~~~  610 (656)
T 2j0j_A          544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGR-----------IENGER  610 (656)
T ss_dssp             ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHH-----------HHHTCC
T ss_pred             CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH--HHH-----------HHcCCC
Confidence            44333344567889999999988899999999999999999997 9999875422111  111           111100


Q ss_pred             cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1567 LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1567 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                      ..        .+..++..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus       611 ~~--------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          611 LP--------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             CC--------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CC--------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            00        0123456788999999999999999999999999998654


No 228
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=2.4e-36  Score=362.74  Aligned_cols=258  Identities=23%  Similarity=0.390  Sum_probs=203.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc------CCceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA------DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~------~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      ++|...+.||+|+||+||+|++.      ++..||||++... .....++|.+|+.++++++||||+++++++.+.+..+
T Consensus        30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (327)
T 2yfx_A           30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  109 (327)
T ss_dssp             GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence            56777889999999999999842      4678999998643 3445678999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC---CCcEEEee
Q 047591         1408 LILQYMPQGSLEKWLYSHN------YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGD 1478 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~---~~~~kl~D 1478 (1624)
                      +||||+++|+|.+++....      ..+++.+++.++.|++.||+|||+   .+|+||||||+|||++.   +..+||+|
T Consensus       110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~D  186 (327)
T 2yfx_A          110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGD  186 (327)
T ss_dssp             EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEECc
Confidence            9999999999999998653      358899999999999999999996   79999999999999994   45699999


Q ss_pred             ecceeecCCCCC-ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCCh
Q 047591         1479 FGIAKLLDGVDS-MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPD 1556 (1624)
Q Consensus      1479 FGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~ 1556 (1624)
                      ||+++....... .......||+.|+|||...+..++.++|||||||++|||+| |+.||......  ....+       
T Consensus       187 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~-------  257 (327)
T 2yfx_A          187 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEF-------  257 (327)
T ss_dssp             CHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHH-------
T ss_pred             cccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHH-------
Confidence            999986543221 22234568999999999888889999999999999999999 88998653211  11111       


Q ss_pred             hHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1557 AVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1557 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                           +........       +..++..+.+++.+||+.+|++|||+.|+++.|+.+...
T Consensus       258 -----~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~  305 (327)
T 2yfx_A          258 -----VTSGGRMDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  305 (327)
T ss_dssp             -----HHTTCCCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             -----HhcCCCCCC-------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence                 111000000       013455688999999999999999999999999988653


No 229
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=1.1e-35  Score=370.64  Aligned_cols=199  Identities=24%  Similarity=0.331  Sum_probs=167.5

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccC-----Ce
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNP-----GF 1405 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~-----~~ 1405 (1624)
                      .++|...+.||+|+||+||+|+.. +++.||||++...  .....+++.+|++++++++|||||++++++...     +.
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            357888899999999999999875 5788999998642  334567899999999999999999999998765     56


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeec
Q 047591         1406 KALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL 1485 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~ 1485 (1624)
                      .++||||++ |+|.+++... ..+++..+..++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+|+..
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~  179 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTI  179 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence            899999997 5999999754 458999999999999999999996   79999999999999999999999999999976


Q ss_pred             CCCCCc---------------------ccccccccccccccccc-CCCCcCcccchHHHHHHHHHHHcCCCCCC
Q 047591         1486 DGVDSM---------------------KQTMTLATIGYMAPEYG-SEGIVSTSGDVYSFGILMMETLTRRKPTD 1537 (1624)
Q Consensus      1486 ~~~~~~---------------------~~~~~~gt~~y~APE~~-~~~~~~~k~DV~SfGvil~Elltg~~P~~ 1537 (1624)
                      ......                     ..+..+||+.|+|||++ ....++.++||||+||++|||+||..|+.
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            533211                     12456899999999975 56679999999999999999999766654


No 230
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=1.4e-36  Score=369.91  Aligned_cols=249  Identities=23%  Similarity=0.284  Sum_probs=191.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHH-HHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEV-MRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~-l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      ++|...++||+|+||+||+|+.. +++.||||+++...   ....+.+.+|..+ ++.++|||||++++++.+.+..++|
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            46777899999999999999886 57889999986442   2334567777776 5778999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC
Q 047591         1410 LQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~ 1489 (1624)
                      |||+++|+|.+++.+.+ .+++.....++.||+.||+|||+   .+|+||||||+|||++.++++||+|||+|+......
T Consensus       118 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~  193 (373)
T 2r5t_A          118 LDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN  193 (373)
T ss_dssp             EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred             EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence            99999999999997653 56788888999999999999996   799999999999999999999999999998643222


Q ss_pred             CccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1490 SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1490 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                       ......+||+.|||||++.+..++.++|||||||++|||++|+.||......+ ..            ..++.....- 
T Consensus       194 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~------------~~i~~~~~~~-  258 (373)
T 2r5t_A          194 -STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MY------------DNILNKPLQL-  258 (373)
T ss_dssp             -CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH-HH------------HHHHHSCCCC-
T ss_pred             -CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HH------------HHHHhcccCC-
Confidence             23345679999999999999999999999999999999999999997532111 11            1111111100 


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANL 1610 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L 1610 (1624)
                      .        ..++..+.+++.+|++.||++||++.+.++.+
T Consensus       259 ~--------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i  291 (373)
T 2r5t_A          259 K--------PNITNSARHLLEGLLQKDRTKRLGAKDDFMEI  291 (373)
T ss_dssp             C--------SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred             C--------CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence            0        12345578899999999999999986544433


No 231
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=8.8e-36  Score=358.09  Aligned_cols=263  Identities=18%  Similarity=0.272  Sum_probs=201.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccchhhHHHHHHHHHHHHHhcC-CCceeEEEeeecc--CCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIR-HRNLAKIVSSCSN--PGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~-HpNIv~l~g~~~~--~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+. .+++.||||+++...   .+.+.+|++++++++ ||||+++++++.+  ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            4677788999999999999987 468899999986432   367899999999997 9999999999987  56789999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCC-cEEEeeecceeecCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~-~~kl~DFGla~~~~~~~ 1489 (1624)
                      ||+++++|.+++..    +++.++..++.|++.||+|||+   .+|+||||||+|||++.++ .+||+|||+|+......
T Consensus       113 e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~  185 (330)
T 3nsz_A          113 EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ  185 (330)
T ss_dssp             ECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred             eccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence            99999999998853    7888999999999999999996   7999999999999999776 89999999998775433


Q ss_pred             CccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1490 SMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1490 ~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                      .  .....||+.|+|||...+ ..++.++|||||||++|||+||+.||.........+.......-.....+.++..-..
T Consensus       186 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  263 (330)
T 3nsz_A          186 E--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE  263 (330)
T ss_dssp             C--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred             c--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence            2  334579999999998766 6789999999999999999999999854333222222221111111122222111100


Q ss_pred             CchHH----------------HHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1569 GEEEA----------------DIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1569 ~~~~~----------------~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .....                .......++..+.+++.+|++.||++|||++|+++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            00000                000011245678999999999999999999999863


No 232
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.1e-35  Score=350.31  Aligned_cols=246  Identities=24%  Similarity=0.365  Sum_probs=194.9

Q ss_pred             CCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeecc----CCeeEEE
Q 047591         1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSN----PGFKALI 1409 (1624)
Q Consensus      1337 f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~----~~~~~lV 1409 (1624)
                      |...+.||+|+||+||+|... ++..||+|++...  .....+.|.+|++++++++||||+++++++..    ....++|
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            445568999999999999875 5778999988643  24456789999999999999999999998764    4568999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCc--eEEcCCCCCcEEec-CCCcEEEeeecceeecC
Q 047591         1410 LQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS--IIHCDLKPSNVLLD-DDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~--iiHrDlK~~NILld-~~~~~kl~DFGla~~~~ 1486 (1624)
                      |||+++|+|.+++... ..+++..+..++.|++.||+|||+   .+  |+||||||+||+++ +++.+||+|||+++...
T Consensus       108 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence            9999999999999764 357899999999999999999996   45  99999999999998 78999999999997543


Q ss_pred             CCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhc
Q 047591         1487 GVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANL 1566 (1624)
Q Consensus      1487 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 1566 (1624)
                      ..   ......||+.|+|||.+. +.++.++|||||||++|||+||+.||..................+..         
T Consensus       184 ~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------  250 (290)
T 1t4h_A          184 AS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS---------  250 (290)
T ss_dssp             TT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGG---------
T ss_pred             cc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccc---------
Confidence            32   223456999999999876 45899999999999999999999999754322221111111111100         


Q ss_pred             cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1567 LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1567 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                                ....++..+.+++.+||+.+|++|||+.|+++.
T Consensus       251 ----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          251 ----------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             ----------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ----------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence                      001223467889999999999999999999863


No 233
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=3.4e-36  Score=373.51  Aligned_cols=253  Identities=23%  Similarity=0.273  Sum_probs=192.2

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--------hhHHHHHHHHHHHHHhcCCCceeEEEeeeccC
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--------DRALKSFDAECEVMRRIRHRNLAKIVSSCSNP 1403 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--------~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~ 1403 (1624)
                      ..++|...+.||+|+||+||+|... +++.||||++....        ......+.+|++++++++|||||++++++. .
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence            3568888999999999999999875 57899999986432        112235889999999999999999999985 4


Q ss_pred             CeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCC---CcEEEeeec
Q 047591         1404 GFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDD---MVAHLGDFG 1480 (1624)
Q Consensus      1404 ~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~---~~~kl~DFG 1480 (1624)
                      +..++|||||++|+|.+++... ..+++.++..|+.|++.||+|||+   .+|+||||||+|||++.+   +.+||+|||
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DFG  287 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFG  287 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred             CceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeecc
Confidence            5579999999999999988654 458999999999999999999996   789999999999999754   459999999


Q ss_pred             ceeecCCCCCccccccccccccccccccC---CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChh
Q 047591         1481 IAKLLDGVDSMKQTMTLATIGYMAPEYGS---EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDA 1557 (1624)
Q Consensus      1481 la~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~ 1557 (1624)
                      +|+......  ......||+.|||||++.   ...++.++|||||||++|||+||+.||...............      
T Consensus       288 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~------  359 (419)
T 3i6u_A          288 HSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS------  359 (419)
T ss_dssp             TTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT------
T ss_pred             cceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc------
Confidence            998765322  233457999999999875   367889999999999999999999999753322111111111      


Q ss_pred             HHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1558 VTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1558 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                             .....    .......++..+.+++.+|++.+|++|||++|+++.
T Consensus       360 -------~~~~~----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          360 -------GKYNF----IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             -------TCCCC----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -------CCCCC----CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence                   10000    011123345678899999999999999999999874


No 234
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=2.8e-36  Score=355.22  Aligned_cols=250  Identities=24%  Similarity=0.262  Sum_probs=187.5

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      .++|...+.||+|+||+||+|+.. +++.||||+++...  ....+.+.+|...++.++||||+++++++.+++..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            456778899999999999999874 68899999986432  233344556666688899999999999999999999999


Q ss_pred             EecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-ceEEcCCCCCcEEecCCCcEEEeeecceeecC
Q 047591         1411 QYMPQGSLEKWLYS---HNYLLNIEQRLDIMIDVACALEYLHQGYST-SIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~-~iiHrDlK~~NILld~~~~~kl~DFGla~~~~ 1486 (1624)
                      ||++ |+|.+++..   .+..+++..+..|+.|++.||+|||+   . +|+||||||+||+++.++.+||+|||+|+...
T Consensus        86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            9998 588887764   45678999999999999999999996   5 89999999999999999999999999998765


Q ss_pred             CCCCcccccccccccccccccc----CCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHH
Q 047591         1487 GVDSMKQTMTLATIGYMAPEYG----SEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVI 1562 (1624)
Q Consensus      1487 ~~~~~~~~~~~gt~~y~APE~~----~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1562 (1624)
                      ...  ......||+.|+|||++    .+..++.++|||||||++|||+||+.||+........+........        
T Consensus       162 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------  231 (290)
T 3fme_A          162 DDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS--------  231 (290)
T ss_dssp             ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC--------
T ss_pred             ccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC--------
Confidence            332  22334699999999985    5667899999999999999999999999753222222222111111        


Q ss_pred             hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1563 DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1563 d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                          ....       ...++..+.+++.+|++.+|++|||++|+++
T Consensus       232 ----~~~~-------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          232 ----PQLP-------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             ----CCCC-------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ----CCcc-------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence                0000       0123456889999999999999999999987


No 235
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-36  Score=366.97  Aligned_cols=253  Identities=22%  Similarity=0.268  Sum_probs=200.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEE----cCCceEEEEEeccch----hhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATF----ADGTNAAIKIFSLQE----DRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGF 1405 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~----~~~~~vAvK~~~~~~----~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~ 1405 (1624)
                      ++|...+.||+|+||+||+|+.    .+++.||||+++...    ....+.+.+|+++++++ +||||+++++++...+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            5678889999999999999987    368899999986432    23346678899999999 69999999999999999


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeec
Q 047591         1406 KALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL 1485 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~ 1485 (1624)
                      .++||||+++|+|.+++...+ .+++.++..++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+|+..
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~  209 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  209 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             EEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence            999999999999999998653 57899999999999999999996   79999999999999999999999999999876


Q ss_pred             CCCCCccccccccccccccccccCC--CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHh
Q 047591         1486 DGVDSMKQTMTLATIGYMAPEYGSE--GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563 (1624)
Q Consensus      1486 ~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d 1563 (1624)
                      ............||+.|+|||++.+  ..++.++|||||||++|||+||+.||........ ...+.        ..+..
T Consensus       210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~--------~~~~~  280 (355)
T 1vzo_A          210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEIS--------RRILK  280 (355)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHH--------HHHHH
T ss_pred             ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHH--------HHHhc
Confidence            5433333445679999999999875  4578999999999999999999999964321111 00000        00111


Q ss_pred             hhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 047591         1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERM-----NVKDALAN 1609 (1624)
Q Consensus      1564 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----t~~evl~~ 1609 (1624)
                      .. ...        +..++..+.+++.+||+.||++||     |++|+++.
T Consensus       281 ~~-~~~--------~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          281 SE-PPY--------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             CC-CCC--------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             cC-CCC--------CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            00 000        012345678899999999999999     99999865


No 236
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1.3e-36  Score=365.88  Aligned_cols=241  Identities=24%  Similarity=0.356  Sum_probs=199.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--------hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--------DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGF 1405 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--------~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~ 1405 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||+++...        ....+.+.+|++++++++||||+++++++.+.+.
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            46788899999999999999864 68889999986432        1234567889999999999999999999999999


Q ss_pred             eEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceee
Q 047591         1406 KALILQYMPQG-SLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKL 1484 (1624)
Q Consensus      1406 ~~lV~ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~ 1484 (1624)
                      .++||||+..| +|.+++...+ .+++..+..|+.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~  179 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAY  179 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence            99999999887 9999997653 58999999999999999999997   7999999999999999999999999999988


Q ss_pred             cCCCCCccccccccccccccccccCCCCc-CcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHh
Q 047591         1485 LDGVDSMKQTMTLATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563 (1624)
Q Consensus      1485 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d 1563 (1624)
                      .....  ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....       ......         
T Consensus       180 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~---------  241 (335)
T 3dls_A          180 LERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-------TVEAAI---------  241 (335)
T ss_dssp             CCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-------GTTTCC---------
T ss_pred             CCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-------HHhhcc---------
Confidence            75432  2234579999999999887776 8899999999999999999999965211       000000         


Q ss_pred             hhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1564 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                         .. .        ..++..+.+++.+|++.+|++|||+.|+++.
T Consensus       242 ---~~-~--------~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          242 ---HP-P--------YLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             ---CC-S--------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             ---CC-C--------cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               00 0        0123457889999999999999999999874


No 237
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=8.9e-36  Score=377.25  Aligned_cols=247  Identities=23%  Similarity=0.306  Sum_probs=200.5

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...++||+|+||+||+|+.. +|+.||||++....   ....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            56777889999999999999885 68999999986432   233567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1411 QYMPQGSLEKWLYSH---NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      ||+++|+|.+++...   ...+++..+..|+.||+.||+|||+   .+|+||||||+|||++.++++||+|||+|+.+..
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence            999999999999864   3468999999999999999999996   7999999999999999999999999999998754


Q ss_pred             CCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1488 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      ... .....+||+.|||||++.+..++.++|||||||++|||+||+.||........ ...+        ...+..... 
T Consensus       342 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~--------~~~i~~~~~-  410 (543)
T 3c4z_A          342 GQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKEL--------KQRVLEQAV-  410 (543)
T ss_dssp             TCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHH--------HHHHHHCCC-
T ss_pred             CCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHH--------HHHHhhccc-
Confidence            322 23345799999999999999999999999999999999999999975321100 0000        001111111 


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNV 1603 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~ 1603 (1624)
                      ..        +..++..+.+++.+|++.+|++||++
T Consensus       411 ~~--------p~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          411 TY--------PDKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             CC--------CTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             CC--------CcccCHHHHHHHHHhccCCHhHCCCC
Confidence            00        01234567889999999999999976


No 238
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=9.2e-36  Score=351.84  Aligned_cols=248  Identities=22%  Similarity=0.295  Sum_probs=203.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc---hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+.. +++.+|+|++...   .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            45677789999999999999886 4788999998643   2345678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++++|.+++... ..+++.++..++.|+++||+|||+   .+|+||||||+||+++.++.+||+|||+++...... 
T Consensus        95 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-  169 (294)
T 2rku_A           95 ELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-  169 (294)
T ss_dssp             ECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred             ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCc-
Confidence            999999999988754 357899999999999999999997   799999999999999999999999999998765322 


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                      .......||+.|+|||...+..++.++|||||||++|||+||+.||......+. ....            ..... ...
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~------------~~~~~-~~~  235 (294)
T 2rku_A          170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-YLRI------------KKNEY-SIP  235 (294)
T ss_dssp             CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHH------------HTTCC-CCC
T ss_pred             cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH------------hhccC-CCc
Confidence            223345799999999999888899999999999999999999999975322111 1110            00000 000


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                              ..++..+.+++.+||+.+|++|||++|+++.
T Consensus       236 --------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          236 --------KHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             --------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             --------cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence                    1233457789999999999999999999864


No 239
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=8.7e-36  Score=350.24  Aligned_cols=243  Identities=19%  Similarity=0.265  Sum_probs=197.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++...  ......++.+|+..+.++ +||||+++++++.+++..++||
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            45777889999999999999886 6899999998643  234567888999999999 9999999999999999999999


Q ss_pred             EecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC-----------------
Q 047591         1411 QYMPQGSLEKWLYSH---NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD----------------- 1470 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~----------------- 1470 (1624)
                      ||+++|+|.+++...   ...+++.++..|+.||+.||+|||+   .+|+||||||+||+++.                 
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~  167 (289)
T 1x8b_A           91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA  167 (289)
T ss_dssp             ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC------------------
T ss_pred             EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence            999999999999754   2568999999999999999999997   79999999999999984                 


Q ss_pred             --CCcEEEeeecceeecCCCCCccccccccccccccccccCCC-CcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhh
Q 047591         1471 --DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG-IVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547 (1624)
Q Consensus      1471 --~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~ 1547 (1624)
                        ...+||+|||.++......     ...||+.|+|||.+.+. .++.++|||||||++|||++|+.|+...    ....
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~  238 (289)
T 1x8b_A          168 SNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----DQWH  238 (289)
T ss_dssp             --CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----HHHH
T ss_pred             CCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----hHHH
Confidence              4489999999998775322     23599999999988765 6678999999999999999998875431    1111


Q ss_pred             hhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1548 HWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1548 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .......+.         +           +..++..+.+++.+||+.||++|||+.|+++.
T Consensus       239 ~~~~~~~~~---------~-----------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          239 EIRQGRLPR---------I-----------PQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             HHHTTCCCC---------C-----------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             HHHcCCCCC---------C-----------CcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence            111111100         0           01234567889999999999999999999863


No 240
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=1.1e-36  Score=367.23  Aligned_cols=252  Identities=21%  Similarity=0.321  Sum_probs=197.6

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeEEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      .++|...+.||+|+||+||+|+.. +++.||||+++....    .+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            346778899999999999999875 588999999864332    345788889888 79999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCC----CcEEEeeecceeecCC
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDD----MVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~----~~~kl~DFGla~~~~~ 1487 (1624)
                      |+++|+|.+++.+.+ .+++.++..++.||+.||+|||+   .+|+||||||+|||+.++    +.+||+|||+|+....
T Consensus        97 ~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~  172 (342)
T 2qr7_A           97 LMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA  172 (342)
T ss_dssp             CCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred             CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence            999999999997653 58899999999999999999996   799999999999998433    3599999999997654


Q ss_pred             CCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1488 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      ... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........  .         .+.+.+.....
T Consensus       173 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~---------~~~~~i~~~~~  240 (342)
T 2qr7_A          173 ENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP--E---------EILARIGSGKF  240 (342)
T ss_dssp             TTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH--H---------HHHHHHHHCCC
T ss_pred             CCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH--H---------HHHHHHccCCc
Confidence            322 23345799999999998888899999999999999999999999975321110  0         01111111100


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ....    ..+..++..+.+++.+|++.||++|||+.|+++.
T Consensus       241 ~~~~----~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          241 SLSG----GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             CCCS----TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             ccCc----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            0000    0012245567889999999999999999998863


No 241
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=3.1e-36  Score=363.71  Aligned_cols=252  Identities=24%  Similarity=0.286  Sum_probs=198.4

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHHH-HHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECEV-MRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~~-l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      ..++|...+.||+|+||+||+|+.. +|+.||||+++... ....+++..|..+ ++.++||||+++++++.+++..++|
T Consensus        49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv  128 (340)
T 3an0_A           49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC  128 (340)
T ss_dssp             CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred             ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence            4467788889999999999999874 68899999986432 2334556666665 7788999999999999999999999


Q ss_pred             EEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecC
Q 047591         1410 LQYMPQGSLEKWLYS---HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~ 1486 (1624)
                      |||+++ +|.+++..   .+..+++..+..|+.||+.||+|||+.  .+|+||||||+|||++.++.+||+|||+++...
T Consensus       129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  205 (340)
T 3an0_A          129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLV  205 (340)
T ss_dssp             ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred             HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence            999985 99998864   456789999999999999999999961  389999999999999999999999999998764


Q ss_pred             CCCCccccccccccccccccccC----CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHH
Q 047591         1487 GVDSMKQTMTLATIGYMAPEYGS----EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVI 1562 (1624)
Q Consensus      1487 ~~~~~~~~~~~gt~~y~APE~~~----~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1562 (1624)
                      ..  .......||+.|+|||++.    ...++.++|||||||++|||+||+.||+........+...            +
T Consensus       206 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~------------~  271 (340)
T 3an0_A          206 DS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV------------V  271 (340)
T ss_dssp             CH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH------------H
T ss_pred             cc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHH------------h
Confidence            32  1223347999999999853    4478999999999999999999999997532221111111            1


Q ss_pred             hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1563 DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1563 d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      ........       ...++..+.+++.+||+.+|++|||+.|+++
T Consensus       272 ~~~~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  310 (340)
T 3an0_A          272 EEPSPQLP-------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  310 (340)
T ss_dssp             HSCCCCCC-------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             cCCCCCCC-------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            11100000       0124556889999999999999999999987


No 242
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=1.3e-35  Score=373.52  Aligned_cols=194  Identities=23%  Similarity=0.326  Sum_probs=154.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeecc-----CCee
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSN-----PGFK 1406 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~-----~~~~ 1406 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++...  .....+++.+|++++++++|||||++++++..     .+..
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            57888999999999999999875 6889999988542  33456789999999999999999999999843     3568


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecC
Q 047591         1407 ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~ 1486 (1624)
                      ++||||+. |+|.+++... ..+++..+..|+.||++||+|||+   .+||||||||+|||++.++.+||+|||+|+...
T Consensus       133 ~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          133 YVVLEIAD-SDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             EEEECCCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred             EEEEeccc-cchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence            99999985 7999988754 458999999999999999999996   799999999999999999999999999998764


Q ss_pred             CCCC--------------------------cccccccccccccccccc-CCCCcCcccchHHHHHHHHHHHcCC
Q 047591         1487 GVDS--------------------------MKQTMTLATIGYMAPEYG-SEGIVSTSGDVYSFGILMMETLTRR 1533 (1624)
Q Consensus      1487 ~~~~--------------------------~~~~~~~gt~~y~APE~~-~~~~~~~k~DV~SfGvil~Elltg~ 1533 (1624)
                      ....                          ...+..+||+.|||||++ ....++.++|||||||++|||+||.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~  281 (458)
T 3rp9_A          208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI  281 (458)
T ss_dssp             SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred             CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence            3211                          122345789999999975 5667999999999999999999943


No 243
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=1.1e-35  Score=358.31  Aligned_cols=248  Identities=22%  Similarity=0.302  Sum_probs=203.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc---hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||.||+|+.. +++.+|+|++...   .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            45677789999999999999886 4788999998643   2345678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++++|.+++... ..+++.++..++.|+++||+|||+   .+|+||||||+||+++.++.+||+|||+++...... 
T Consensus       121 e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-  195 (335)
T 2owb_A          121 ELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-  195 (335)
T ss_dssp             CCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred             ecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccCc-
Confidence            999999999988754 358899999999999999999996   799999999999999999999999999998765322 


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                      .......||+.|+|||++.+..++.++|||||||++|||+||+.||......+. ...            +..... ...
T Consensus       196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~------------~~~~~~-~~~  261 (335)
T 2owb_A          196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-YLR------------IKKNEY-SIP  261 (335)
T ss_dssp             CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHH------------HHHTCC-CCC
T ss_pred             ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH-HHH------------HhcCCC-CCC
Confidence            223345799999999999888899999999999999999999999975321111 000            001000 000


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                              ..+...+.+++.+||+.||++|||++|+++.
T Consensus       262 --------~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          262 --------KHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             --------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             --------ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                    1233457789999999999999999999863


No 244
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.6e-36  Score=363.18  Aligned_cols=271  Identities=24%  Similarity=0.293  Sum_probs=199.6

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchh-----hHHHHHHHHHHHHHhcCCCceeEEEeeeccCCee
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQED-----RALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFK 1406 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~-----~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~ 1406 (1624)
                      ..+.|...+.||+|+||+||+|+.. +|+.||||++.....     ...+.+.+|++++++++||||+++++++.+.+..
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            3467888899999999999999875 588999999864321     1235788999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecC
Q 047591         1407 ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~ 1486 (1624)
                      ++||||+++ +|.+++......+++.++..++.|+++||+|||+   .+|+||||||+|||++.++.+||+|||+|+...
T Consensus        88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFG  163 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence            999999986 8999998776678889999999999999999996   789999999999999999999999999998764


Q ss_pred             CCCCccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhh-cCC--hhHHHH-
Q 047591         1487 GVDSMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE-SLP--DAVTDV- 1561 (1624)
Q Consensus      1487 ~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~-~~~--~~~~~~- 1561 (1624)
                      ... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+...... ..+  +.+.+. 
T Consensus       164 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~  241 (346)
T 1ua2_A          164 SPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMC  241 (346)
T ss_dssp             SCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTT
T ss_pred             CCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhhhhhc
Confidence            322 22334579999999998865 458999999999999999999999986542211 11111110 000  000000 


Q ss_pred             --HhhhccCCchH-HHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1562 --IDANLLSGEEE-ADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1562 --~d~~l~~~~~~-~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                        .+......... ........++..+.+++.+|++.||++|||++|+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence              00000000000 0000112345678899999999999999999999864


No 245
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=2.5e-36  Score=353.69  Aligned_cols=254  Identities=22%  Similarity=0.303  Sum_probs=199.2

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeec--cCCeeEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCS--NPGFKALI 1409 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~--~~~~~~lV 1409 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||+|++...  .....+.+.+|++++++++||||+++++++.  ..+..++|
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   85 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   85 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence            46777889999999999999885 6889999998643  2345678999999999999999999999874  46788999


Q ss_pred             EEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhcC--CCceEEcCCCCCcEEecCCCcEEEeeecceee
Q 047591         1410 LQYMPQGSLEKWLYSH---NYLLNIEQRLDIMIDVACALEYLHQGY--STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKL 1484 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gl~yLH~~~--~~~iiHrDlK~~NILld~~~~~kl~DFGla~~ 1484 (1624)
                      |||+++|+|.+++...   ...+++..+..++.|++.||+|||+..  ..+|+||||||+||++++++.+||+|||+++.
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~  165 (279)
T 2w5a_A           86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  165 (279)
T ss_dssp             EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred             EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence            9999999999999753   345899999999999999999999731  12399999999999999999999999999987


Q ss_pred             cCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhh
Q 047591         1485 LDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDA 1564 (1624)
Q Consensus      1485 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 1564 (1624)
                      ...... ......||+.|+|||...+..++.++|||||||++|||+||+.||.......  +...           +...
T Consensus       166 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~-----------i~~~  231 (279)
T 2w5a_A          166 LNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--LAGK-----------IREG  231 (279)
T ss_dssp             C---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH-----------HHHT
T ss_pred             eccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH--HHHH-----------Hhhc
Confidence            643221 1223568999999999988889999999999999999999999987542111  1110           1110


Q ss_pred             hccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 047591         1565 NLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANL 1610 (1624)
Q Consensus      1565 ~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L 1610 (1624)
                      .....        +..++..+.+++.+||+.+|++|||+.|+++.+
T Consensus       232 ~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          232 KFRRI--------PYRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             CCCCC--------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             ccccC--------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            00000        012345688999999999999999999999764


No 246
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.3e-35  Score=352.30  Aligned_cols=248  Identities=25%  Similarity=0.363  Sum_probs=203.9

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      +.|...+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            45777789999999999999875 68899999986443 34467899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcc
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~ 1492 (1624)
                      +++|+|.+++..  ..+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus       102 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~  175 (303)
T 3a7i_A          102 LGGGSALDLLEP--GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IK  175 (303)
T ss_dssp             CTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-CC
T ss_pred             CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccc-cc
Confidence            999999999864  358899999999999999999997   799999999999999999999999999998765432 22


Q ss_pred             ccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchH
Q 047591         1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEE 1572 (1624)
Q Consensus      1493 ~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 1572 (1624)
                      .....||+.|+|||+..+..++.++|||||||++|||+||+.||.......  ....+....+        ..+.     
T Consensus       176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~--------~~~~-----  240 (303)
T 3a7i_A          176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKNNP--------PTLE-----  240 (303)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCC--------CCCC-----
T ss_pred             cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcCCC--------CCCc-----
Confidence            344579999999999998899999999999999999999999987532211  1111100000        0000     


Q ss_pred             HHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1573 ADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1573 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                            ..++..+.+++.+||+.+|++|||+.|+++.
T Consensus       241 ------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          241 ------GNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             ------SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             ------cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                  1234567889999999999999999999875


No 247
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=6.2e-36  Score=355.13  Aligned_cols=249  Identities=23%  Similarity=0.330  Sum_probs=199.6

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEec
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYM 1413 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey~ 1413 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            45777889999999999999875 68999999997654445567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe---cCCCcEEEeeecceeecCCCCC
Q 047591         1414 PQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1414 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl---d~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ++|+|.+++...+ .+++.++..++.|++.||+|||+   .+|+||||||+||++   ++++.+||+|||+++.....  
T Consensus        89 ~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--  162 (304)
T 2jam_A           89 SGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--  162 (304)
T ss_dssp             CSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB--
T ss_pred             CCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC--
Confidence            9999999997643 57899999999999999999996   799999999999999   78899999999999765322  


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                       ......||+.|+|||...+..++.++|||||||++|||+||+.||....... .........             ....
T Consensus       163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~-------------~~~~  227 (304)
T 2jam_A          163 -IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK-LFEKIKEGY-------------YEFE  227 (304)
T ss_dssp             -TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHCC-------------CCCC
T ss_pred             -ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCC-------------CCCC
Confidence             2234569999999999999999999999999999999999999986532111 111111100             0000


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      .    .....++..+.+++.+|++.||++|||++|+++
T Consensus       228 ~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          228 S----PFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             T----TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             c----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0    001123456889999999999999999999986


No 248
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=4.1e-36  Score=365.70  Aligned_cols=266  Identities=23%  Similarity=0.291  Sum_probs=203.2

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            56777889999999999999886 6889999998754 344567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcc
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~ 1492 (1624)
                      +++|+|.+++...+ .+++..+..++.|++.||+|||+.  .+|+||||||+|||++.++.+||+|||+++.....   .
T Consensus       113 ~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~  186 (360)
T 3eqc_A          113 MDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M  186 (360)
T ss_dssp             CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---C
T ss_pred             CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---c
Confidence            99999999997653 578999999999999999999961  37999999999999999999999999998765321   1


Q ss_pred             ccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhh--hhh------------------
Q 047591         1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW--VEE------------------ 1552 (1624)
Q Consensus      1493 ~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~--~~~------------------ 1552 (1624)
                      .....||+.|+|||++.+..++.++|||||||++|||+||+.||......+.....-  ...                  
T Consensus       187 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (360)
T 3eqc_A          187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK  266 (360)
T ss_dssp             ----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------------
T ss_pred             ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccc
Confidence            234579999999999999999999999999999999999999997533221110000  000                  


Q ss_pred             -----cCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1553 -----SLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1553 -----~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                           ..+....+.++.........   .....++..+.+++.+|++.||++|||++|+++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          267 FGMDSRPPMAIFELLDYIVNEPPPK---LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             -------CCCHHHHHHHHHHSCCCC---CCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             cccCCCCcccchhhhhHHhccCCCC---CCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence                 00000001111000000000   0001235578899999999999999999999864


No 249
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=3.7e-36  Score=361.35  Aligned_cols=268  Identities=23%  Similarity=0.295  Sum_probs=192.7

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      .++|...+.||+|+||+||+|+.. +++.||||+++...  ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  112 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF  112 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence            356788899999999999999865 68899999986443  233567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe-----cCCCcEEEeeecceeec
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL-----DDDMVAHLGDFGIAKLL 1485 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl-----d~~~~~kl~DFGla~~~ 1485 (1624)
                      ||++ |+|.+++.... .+++..+..|+.||+.||+|||+   .+|+||||||+|||+     ++++.+||+|||+|+..
T Consensus       113 e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~  187 (329)
T 3gbz_A          113 EYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF  187 (329)
T ss_dssp             ECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred             ecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence            9998 59999997654 47899999999999999999997   799999999999999     45566999999999876


Q ss_pred             CCCCCccccccccccccccccccCCC-CcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhh-cCChh--HHHH
Q 047591         1486 DGVDSMKQTMTLATIGYMAPEYGSEG-IVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE-SLPDA--VTDV 1561 (1624)
Q Consensus      1486 ~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~-~~~~~--~~~~ 1561 (1624)
                      .... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||......+. +...... ..++.  ....
T Consensus       188 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~  265 (329)
T 3gbz_A          188 GIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ-LFKIFEVLGLPDDTTWPGV  265 (329)
T ss_dssp             C------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCTTTSTTG
T ss_pred             CCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH-HHHHHHHhCCCchhhhhhh
Confidence            4322 223345789999999988764 589999999999999999999999975432211 1111110 00000  0000


Q ss_pred             Hh-h----hccC-CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1562 ID-A----NLLS-GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1562 ~d-~----~l~~-~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      .. +    .... ............+...+.+++.+|++.||++|||++|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             GGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            00 0    0000 0000011111224567889999999999999999999986


No 250
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=4.2e-36  Score=359.59  Aligned_cols=241  Identities=35%  Similarity=0.589  Sum_probs=199.5

Q ss_pred             ccCHHHHHhhcCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccC
Q 047591          733 RISYQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNH  812 (1624)
Q Consensus       733 ~~~~~el~~~t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~  812 (1624)
                      ++++.++..++++|+..+.||+|+||+||+|+..+|+.||||++........+.+.+|++++++++||||++++++|.+.
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            45566677889999999999999999999999888999999998766656677899999999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeee
Q 047591          813 GFKALILEYMPQGSLEKWLYSHK---YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFG  889 (1624)
Q Consensus       813 ~~~~lV~Ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFG  889 (1624)
                      +..++||||+++|+|.+++....   ..+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg  184 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG  184 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred             CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence            99999999999999999986543   2589999999999999999999994   59999999999999999999999999


Q ss_pred             eeeccCCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCccCcC-cchHHHHHHHHhh-hh
Q 047591          890 ISKLLDGEDS-VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTG-ETSLKKWVEESLR-LA  966 (1624)
Q Consensus       890 la~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~~~~-~~~l~~~~~~~~~-~~  966 (1624)
                      +++....... .......||+.|+|||++..+.++.++|||||||++|||+||+.||...... ......|...... ..
T Consensus       185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  264 (321)
T 2qkw_B          185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ  264 (321)
T ss_dssp             TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred             cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence            9987543222 2233446999999999988888999999999999999999999998754332 2344555443322 22


Q ss_pred             hhhccchhcc
Q 047591          967 VTEVVDAELL  976 (1624)
Q Consensus       967 ~~~~~d~~Ll  976 (1624)
                      +.+.+++...
T Consensus       265 ~~~~~~~~~~  274 (321)
T 2qkw_B          265 LEQIVDPNLA  274 (321)
T ss_dssp             CCSSSSSSCT
T ss_pred             HHHhcChhhc
Confidence            4455555443


No 251
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=2.1e-35  Score=346.85  Aligned_cols=246  Identities=23%  Similarity=0.348  Sum_probs=202.2

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||.||+|+.. +++.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46777889999999999999886 57789999986432   223567999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++|+|.+++...+ .+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||++......  
T Consensus        94 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--  167 (284)
T 2vgo_A           94 EFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--  167 (284)
T ss_dssp             CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS--
T ss_pred             EeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCccc--
Confidence            9999999999997654 57899999999999999999996   79999999999999999999999999999766432  


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCc
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 1570 (1624)
                       ......||+.|+|||+..+..++.++|||||||++|||++|+.||......+. ..            .+......-  
T Consensus       168 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~------------~~~~~~~~~--  231 (284)
T 2vgo_A          168 -RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-HR------------RIVNVDLKF--  231 (284)
T ss_dssp             -CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HH------------HHHTTCCCC--
T ss_pred             -ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-HH------------HHhccccCC--
Confidence             22345799999999999988999999999999999999999999975321111 11            111111000  


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1571 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                             +...+..+.+++.+|++.+|++|||++|+++.
T Consensus       232 -------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          232 -------PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             -------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             -------CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence                   01234567889999999999999999999863


No 252
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.7e-35  Score=352.93  Aligned_cols=250  Identities=25%  Similarity=0.345  Sum_probs=200.4

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      .+.|...+.||+|+||.||+|+.. +|+.||||++....  ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY  105 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence            467888899999999999999886 58899999986432  346789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcc
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~ 1492 (1624)
                      +++|+|.+++......+++.++..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus       106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~  181 (314)
T 3com_A          106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-AK  181 (314)
T ss_dssp             CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-SC
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-cc
Confidence            99999999998666678999999999999999999996   799999999999999999999999999998765332 22


Q ss_pred             ccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchH
Q 047591         1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEE 1572 (1624)
Q Consensus      1493 ~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 1572 (1624)
                      .....||+.|+|||...+..++.++|||||||++|||+||+.||........ .. ......+        . ...    
T Consensus       182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~-~~~~~~~--------~-~~~----  246 (314)
T 3com_A          182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA-IF-MIPTNPP--------P-TFR----  246 (314)
T ss_dssp             BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HH-HHHHSCC--------C-CCS----
T ss_pred             cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH-HH-HHhcCCC--------c-ccC----
Confidence            3345799999999999888999999999999999999999999975321111 00 0000000        0 000    


Q ss_pred             HHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1573 ADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1573 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                          .+..++..+.+++.+||+.+|++|||+.|+++
T Consensus       247 ----~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          247 ----KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             ----SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ----CcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                01123456888999999999999999999986


No 253
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-35  Score=361.98  Aligned_cols=263  Identities=22%  Similarity=0.278  Sum_probs=194.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC------e
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG------F 1405 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~------~ 1405 (1624)
                      +.|...+.||+|+||+||+|+.. +|+.||||++...  .....+++.+|++++++++||||+++++++...+      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~  104 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD  104 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence            56777889999999999999874 6899999998532  3345678999999999999999999999987653      4


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeec
Q 047591         1406 KALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL 1485 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~ 1485 (1624)
                      .++||||+ +++|.+++...  .+++..+..++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+|+..
T Consensus       105 ~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  178 (367)
T 1cm8_A          105 FYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQA  178 (367)
T ss_dssp             CEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence            59999999 88999999763  57889999999999999999996   79999999999999999999999999999876


Q ss_pred             CCCCCccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhh--hcCChhH----
Q 047591         1486 DGVDSMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE--ESLPDAV---- 1558 (1624)
Q Consensus      1486 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~--~~~~~~~---- 1558 (1624)
                      ...    .+...||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ .+.....  ...+...    
T Consensus       179 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~~~  253 (367)
T 1cm8_A          179 DSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQRL  253 (367)
T ss_dssp             CSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHTC
T ss_pred             ccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHh
Confidence            432    334578999999998766 679999999999999999999999997542211 1111111  0011111    


Q ss_pred             -----HHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1559 -----TDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1559 -----~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                           ...+. .+..............+...+.+++.+|++.||++|||++|+++.
T Consensus       254 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          254 QSDEAKNYMK-GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             SCHHHHHHHH-HSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhHHHHHHHH-hCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence                 11110 000000000000001235668899999999999999999999873


No 254
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=4e-36  Score=356.15  Aligned_cols=263  Identities=24%  Similarity=0.342  Sum_probs=186.2

Q ss_pred             HHhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1332 LATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1332 ~at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      ...++|...+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            34567888899999999999999864 68899999886443 34457789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHh-------cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecce
Q 047591         1410 LQYMPQGSLEKWLYS-------HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIA 1482 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla 1482 (1624)
                      |||+++|+|.+++..       ....+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||++
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  168 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVS  168 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence            999999999999974       23458999999999999999999996   79999999999999999999999999999


Q ss_pred             eecCCCCC----ccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChh
Q 047591         1483 KLLDGVDS----MKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDA 1557 (1624)
Q Consensus      1483 ~~~~~~~~----~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~ 1557 (1624)
                      +.......    .......||+.|+|||+... ..++.++|||||||++|||+||+.||........... ......+..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~  247 (303)
T 2vwi_A          169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-TLQNDPPSL  247 (303)
T ss_dssp             HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH-HHTSSCCCT
T ss_pred             heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH-HhccCCCcc
Confidence            76643221    11233579999999998765 5689999999999999999999999976432221111 111111100


Q ss_pred             HHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1558 VTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1558 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .....+....           ..++..+.+++.+||+.||++|||+.|+++.
T Consensus       248 ~~~~~~~~~~-----------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          248 ETGVQDKEML-----------KKYGKSFRKMISLCLQKDPEKRPTAAELLRH  288 (303)
T ss_dssp             TC-----CCC-----------CCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             ccccccchhh-----------hhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            0000011111           1234567889999999999999999999873


No 255
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=2.8e-35  Score=374.69  Aligned_cols=251  Identities=21%  Similarity=0.296  Sum_probs=200.5

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchh-------------hHHHHHHHHHHHHHhcCCCceeEEEee
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQED-------------RALKSFDAECEVMRRIRHRNLAKIVSS 1399 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~-------------~~~~~f~~E~~~l~~l~HpNIv~l~g~ 1399 (1624)
                      .+.|...+.||+|+||+||+|+.. +++.||||++.....             ...+.+.+|++++++++|||||+++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            356888899999999999999875 578899999864321             235678999999999999999999999


Q ss_pred             eccCCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCC---cEEE
Q 047591         1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDM---VAHL 1476 (1624)
Q Consensus      1400 ~~~~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~---~~kl 1476 (1624)
                      |.+.+..++|||||++|+|.+++... ..+++..+..|+.||+.||+|||+   .+|+||||||+|||++.++   .+||
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl  190 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKI  190 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEEE
Confidence            99999999999999999999999765 358999999999999999999996   7999999999999998775   6999


Q ss_pred             eeecceeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCCh
Q 047591         1477 GDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPD 1556 (1624)
Q Consensus      1477 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~ 1556 (1624)
                      +|||+|+......  ......||+.|+|||++. +.++.++||||+||++|||++|+.||......+ .+..        
T Consensus       191 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~--------  258 (504)
T 3q5i_A          191 VDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD-IIKK--------  258 (504)
T ss_dssp             CCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH--------
T ss_pred             EECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH--------
Confidence            9999999875432  233457999999999876 468999999999999999999999997532211 1111        


Q ss_pred             hHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1557 AVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1557 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                          +.......     ....+..++..+.+++.+|++.+|++|||+.|+++.
T Consensus       259 ----i~~~~~~~-----~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          259 ----VEKGKYYF-----DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             ----HHHCCCCC-----CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ----HHcCCCCC-----CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                11110000     111223456678899999999999999999999863


No 256
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=2.8e-35  Score=344.11  Aligned_cols=247  Identities=24%  Similarity=0.383  Sum_probs=194.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      ++|...+.||+|+||.||+|+.. +|+.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            56778899999999999999886 68999999986432   233568899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++++|.+++...+ .+++.++..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++...... 
T Consensus        91 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-  165 (276)
T 2h6d_A           91 EYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-  165 (276)
T ss_dssp             ECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred             eccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCc-
Confidence            9999999999997653 47899999999999999999997   789999999999999999999999999998764322 


Q ss_pred             ccccccccccccccccccCCCCc-CcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~-~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                       ......||+.|+|||...+..+ +.++|||||||++|||++|+.||+......  .            .+.+.......
T Consensus       166 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~------------~~~~~~~~~~~  230 (276)
T 2h6d_A          166 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--L------------FKKIRGGVFYI  230 (276)
T ss_dssp             ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H------------HHHHHHCCCCC
T ss_pred             -ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--H------------HHHhhcCcccC
Confidence             2234568999999999877665 689999999999999999999987532111  0            01111111000


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .        ..++..+.+++.+|++.+|++|||+.|+++.
T Consensus       231 ~--------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          231 P--------EYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             C--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             c--------hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            0        1234567889999999999999999999874


No 257
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=3.1e-35  Score=365.87  Aligned_cols=196  Identities=20%  Similarity=0.258  Sum_probs=171.5

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhc------CCCceeEEEeeeccCCeeE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRI------RHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l------~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      ..|...+.||+|+||+||+|+.. +++.||||+++.. ....+.+.+|+++++.+      +|+||+++++++...+..+
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            46788899999999999999875 5789999998643 33456788899999887      5779999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc--EEEeeecceee
Q 047591         1408 LILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV--AHLGDFGIAKL 1484 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~--~kl~DFGla~~ 1484 (1624)
                      +||||++ |+|.+++.... ..+++..+..|+.||+.||+|||+   .+||||||||+|||++.++.  +||+|||+|+.
T Consensus       176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~  251 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY  251 (429)
T ss_dssp             EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence            9999996 69999998654 458999999999999999999997   69999999999999999887  99999999986


Q ss_pred             cCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCC
Q 047591         1485 LDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDM 1539 (1624)
Q Consensus      1485 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~ 1539 (1624)
                      ....    .....||+.|||||++.+..++.++|||||||++|||+||+.||...
T Consensus       252 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          252 EHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             TTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence            5432    23457999999999999889999999999999999999999999754


No 258
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=2e-35  Score=358.35  Aligned_cols=270  Identities=22%  Similarity=0.299  Sum_probs=201.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeecc--------C
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSN--------P 1403 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~--------~ 1403 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++....  ......+.+|++++++++||||+++++++..        .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            45777889999999999999884 68999999885432  2335678899999999999999999999876        3


Q ss_pred             CeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeeccee
Q 047591         1404 GFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK 1483 (1624)
Q Consensus      1404 ~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~ 1483 (1624)
                      +..++||||+++ ++.+.+......+++.++..|+.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  172 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLAR  172 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence            468999999985 8888887766678999999999999999999996   799999999999999999999999999998


Q ss_pred             ecCCCC---CccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhh--hhcCChh
Q 047591         1484 LLDGVD---SMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWV--EESLPDA 1557 (1624)
Q Consensus      1484 ~~~~~~---~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~--~~~~~~~ 1557 (1624)
                      .+....   ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ +....  ....+..
T Consensus       173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~  251 (351)
T 3mi9_A          173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LALISQLCGSITPE  251 (351)
T ss_dssp             ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTT
T ss_pred             cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChh
Confidence            765322   122234578999999998765 5689999999999999999999999976432211 11110  0011110


Q ss_pred             -HHHHHhhhc------cCC--chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1558 -VTDVIDANL------LSG--EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1558 -~~~~~d~~l------~~~--~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                       ....-+...      ...  ...............+.+++.+|++.||++|||++|+++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence             000000000      000  0000011111234568899999999999999999999874


No 259
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=8e-35  Score=355.71  Aligned_cols=265  Identities=23%  Similarity=0.247  Sum_probs=192.6

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC------e
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG------F 1405 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~------~ 1405 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++...  .....+.+.+|++++++++||||+++++++...+      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence            56888899999999999999875 6888999998643  3345678899999999999999999999987654      7


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeec
Q 047591         1406 KALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL 1485 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~ 1485 (1624)
                      .++||||++ |+|.+++..   .+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+|+..
T Consensus       105 ~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  177 (371)
T 2xrw_A          105 VYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  177 (371)
T ss_dssp             EEEEEECCS-EEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred             eEEEEEcCC-CCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence            899999997 478888853   47889999999999999999996   79999999999999999999999999999876


Q ss_pred             CCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhh----------cCC
Q 047591         1486 DGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE----------SLP 1555 (1624)
Q Consensus      1486 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~----------~~~ 1555 (1624)
                      ...  .......||+.|+|||++.+..++.++|||||||++|||+||+.||.+....+. +...+..          .+.
T Consensus       178 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~  254 (371)
T 2xrw_A          178 GTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQ  254 (371)
T ss_dssp             --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHTTSC
T ss_pred             ccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHHhh
Confidence            432  123345799999999999888999999999999999999999999975422111 1111100          001


Q ss_pred             hhHHHHHhhhcc-CCc-h---------HHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1556 DAVTDVIDANLL-SGE-E---------EADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1556 ~~~~~~~d~~l~-~~~-~---------~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ......+..... ... .         .............+.+++.+|++.||++|||++|+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence            111111110000 000 0         00001122346678999999999999999999999874


No 260
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=1.9e-35  Score=349.86  Aligned_cols=268  Identities=22%  Similarity=0.297  Sum_probs=200.5

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||+++...  ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            46778899999999999999886 68999999986433  2234678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1412 YMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      |++ |+|.+++.... ..+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++...... 
T Consensus        83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-  157 (299)
T 2r3i_A           83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-  157 (299)
T ss_dssp             CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred             ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence            998 69999997653 458899999999999999999997   799999999999999999999999999998764322 


Q ss_pred             ccccccccccccccccccCCCC-cCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhh-cCChh--HHHHH----
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGI-VSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE-SLPDA--VTDVI---- 1562 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~-~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~-~~~~~--~~~~~---- 1562 (1624)
                      .......||+.|+|||...+.. ++.++|||||||++|||+||+.||......+. +...... ..++.  .....    
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  236 (299)
T 2r3i_A          158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGTPDEVVWPGVTSMPD  236 (299)
T ss_dssp             BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHHhCCCchhhhhHhhcCcc
Confidence            1223457899999999887654 79999999999999999999999975432211 1111110 00000  00000    


Q ss_pred             -hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1563 -DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1563 -d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                       ..................++..+.+++.+|++.||++|||+.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~  283 (299)
T 2r3i_A          237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  283 (299)
T ss_dssp             CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence             0000000000000011224567889999999999999999999986


No 261
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=2.3e-35  Score=353.31  Aligned_cols=250  Identities=24%  Similarity=0.296  Sum_probs=195.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--------hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCe
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--------DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGF 1405 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--------~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~ 1405 (1624)
                      ++|...+.||+|+||.||+|+.. +++.||||++....        ......|.+|++++++++||||+++++++..++ 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            45777899999999999999875 57899999986432        122346889999999999999999999987655 


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc---EEEeeecce
Q 047591         1406 KALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV---AHLGDFGIA 1482 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~---~kl~DFGla 1482 (1624)
                      .++||||+++|+|.+++... ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.   +||+|||++
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  164 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHS  164 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred             eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence            79999999999999998754 457899999999999999999996   79999999999999987654   999999999


Q ss_pred             eecCCCCCcccccccccccccccccc---CCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHH
Q 047591         1483 KLLDGVDSMKQTMTLATIGYMAPEYG---SEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVT 1559 (1624)
Q Consensus      1483 ~~~~~~~~~~~~~~~gt~~y~APE~~---~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~ 1559 (1624)
                      +......  ......||+.|+|||++   ....++.++|||||||++|||+||+.||........ +...+         
T Consensus       165 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~---------  232 (322)
T 2ycf_A          165 KILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQI---------  232 (322)
T ss_dssp             EECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHH---------
T ss_pred             eeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHH---------
Confidence            8764321  22345699999999985   356789999999999999999999999975432211 11111         


Q ss_pred             HHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1560 DVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1560 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                         ........    ......++..+.+++.+|++.||++|||+.|+++
T Consensus       233 ---~~~~~~~~----~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          233 ---TSGKYNFI----PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             ---HHTCCCCC----HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ---HhCccccC----chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence               10000000    1112234567889999999999999999999986


No 262
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.3e-34  Score=366.43  Aligned_cols=277  Identities=21%  Similarity=0.210  Sum_probs=203.1

Q ss_pred             CCCc--cceeeEecCCCCcEEEEecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCC
Q 047591           74 NSVC--NWVGVTCGSRHGRVTDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISG  151 (1624)
Q Consensus        74 ~~~C--~W~Gv~C~~~~~~v~~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g  151 (1624)
                      .+.|  .|..|.|...            ++. .+|..+.  ++|+.|+|++|++++..|..|..+++|++|+|++|.+++
T Consensus         6 ~C~C~~~~~~v~c~~~------------~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~   70 (477)
T 2id5_A            6 RCECSAQDRAVLCHRK------------RFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSA   70 (477)
T ss_dssp             TCEEETTTTEEECCSC------------CCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCE
T ss_pred             CCeECCCCCEEEeCCC------------CcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCE
Confidence            3445  3667777542            222 3555543  578999999999998888999999999999999999986


Q ss_pred             ccchhhhccCCCcCEEEccCCcccccCCccccCCCcccccccccccccccccCcccccccccceeccCCcCCCCCCCccc
Q 047591          152 NLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIF  231 (1624)
Q Consensus       152 ~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~  231 (1624)
                       +++..+.++++|++|+|++|++++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.
T Consensus        71 -~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~  149 (477)
T 2id5_A           71 -VEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS  149 (477)
T ss_dssp             -ECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSST
T ss_pred             -eChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhcc
Confidence             4455667899999999999999965556788999999999999999988888999999999999999999988888888


Q ss_pred             ccCccchheeccccccCCCCccccccCCCCcEeecccccccCcCCccccccCcCCeeeccCCcccccCcccccccccccc
Q 047591          232 NVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSII  311 (1624)
Q Consensus       232 ~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~  311 (1624)
                      ++++|++|+|++|+++ .+|...+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|..        .+.+|...
T Consensus       150 ~l~~L~~L~l~~n~l~-~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~--------~~~~~~~~  220 (477)
T 2id5_A          150 GLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY--------LDTMTPNC  220 (477)
T ss_dssp             TCTTCCEEEEESCCCS-SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTT--------CCEECTTT
T ss_pred             CCCCCCEEECCCCcCc-ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcc--------ccccCccc
Confidence            8999999999999887 56666677788888888888888777777777777777777665532        23344433


Q ss_pred             ccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCccccccccccc
Q 047591          312 FNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQ  391 (1624)
Q Consensus       312 ~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~  391 (1624)
                      +...                         +|++|+|++|++++..+..+.++++|+.|+|++|.+++..+..|.++++|+
T Consensus       221 ~~~~-------------------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~  275 (477)
T 2id5_A          221 LYGL-------------------------NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQ  275 (477)
T ss_dssp             TTTC-------------------------CCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCC
T ss_pred             ccCc-------------------------cccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCC
Confidence            3333                         555555555555544334555555666666666666655555555555555


Q ss_pred             EEEcccccc
Q 047591          392 ILNLAYSQL  400 (1624)
Q Consensus       392 ~L~L~~N~l  400 (1624)
                      +|+|++|++
T Consensus       276 ~L~L~~n~l  284 (477)
T 2id5_A          276 EIQLVGGQL  284 (477)
T ss_dssp             EEECCSSCC
T ss_pred             EEECCCCcc
Confidence            555555444


No 263
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.6e-35  Score=361.70  Aligned_cols=274  Identities=21%  Similarity=0.265  Sum_probs=199.5

Q ss_pred             HHHhCCCCcCCeEeecCceEEEEEEE-cCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeecc-------
Q 047591         1331 RLATNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN------- 1402 (1624)
Q Consensus      1331 ~~at~~f~~~~~lG~G~~G~Vyk~~~-~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~------- 1402 (1624)
                      ....++|...+.||+|+||+||+|+. .+|+.||||++.....    .+.+|++++++++|||||++++++..       
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            44567889999999999999999987 4689999998854322    23479999999999999999999843       


Q ss_pred             -------------------------------CCeeEEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHh
Q 047591         1403 -------------------------------PGFKALILQYMPQGSLEKWLYS---HNYLLNIEQRLDIMIDVACALEYL 1448 (1624)
Q Consensus      1403 -------------------------------~~~~~lV~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gl~yL 1448 (1624)
                                                     ....++||||++ |+|.+.+..   .+..+++..+..|+.||++||+||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                           334789999998 588887763   456789999999999999999999


Q ss_pred             hhcCCCceEEcCCCCCcEEec-CCCcEEEeeecceeecCCCCCccccccccccccccccccCCC-CcCcccchHHHHHHH
Q 047591         1449 HQGYSTSIIHCDLKPSNVLLD-DDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG-IVSTSGDVYSFGILM 1526 (1624)
Q Consensus      1449 H~~~~~~iiHrDlK~~NILld-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DV~SfGvil 1526 (1624)
                      |+   .+|+||||||+|||++ .++.+||+|||+|+......  ......||+.|+|||.+.+. .++.++||||+||++
T Consensus       158 H~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  232 (383)
T 3eb0_A          158 HS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF  232 (383)
T ss_dssp             HT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             HH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence            95   7999999999999998 68999999999999775433  23345789999999987654 589999999999999


Q ss_pred             HHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHH--hhhcc----C--CchHHHHHHHHHhHHHHHHHHHHccccCCC
Q 047591         1527 METLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVI--DANLL----S--GEEEADIAAKKKCMSSVMSLALKCSEEIPE 1598 (1624)
Q Consensus      1527 ~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~--d~~l~----~--~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~ 1598 (1624)
                      |||++|+.||......+ .+...+...-.....++.  ++...    .  .........+..++..+.+++.+|++.+|+
T Consensus       233 ~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  311 (383)
T 3eb0_A          233 GELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD  311 (383)
T ss_dssp             HHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred             HHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence            99999999997643221 111111110000000110  00000    0  000001111123556789999999999999


Q ss_pred             CCCCHHHHHHH--HHHHHH
Q 047591         1599 ERMNVKDALAN--LKKIKT 1615 (1624)
Q Consensus      1599 ~RPt~~evl~~--L~~i~~ 1615 (1624)
                      +|||+.|+++.  +++++.
T Consensus       312 ~R~t~~e~l~hp~f~~~~~  330 (383)
T 3eb0_A          312 LRINPYEAMAHPFFDHLRN  330 (383)
T ss_dssp             GSCCHHHHHTSGGGHHHHH
T ss_pred             hCCCHHHHhcCHHHHHHHh
Confidence            99999999853  444433


No 264
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=6.1e-35  Score=355.93  Aligned_cols=267  Identities=24%  Similarity=0.268  Sum_probs=201.0

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccC-----Cee
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNP-----GFK 1406 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~-----~~~ 1406 (1624)
                      .++|...+.||+|+||+||+|+.. +++.||||++... .....+.+.+|++++++++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            357888899999999999999875 6788999998643 334457899999999999999999999998654     468


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecC
Q 047591         1407 ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~ 1486 (1624)
                      ++||||++ |+|.+++...  .+++.++..|+.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+...
T Consensus       106 ~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  179 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD  179 (364)
T ss_dssp             EEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence            99999998 5999999764  48899999999999999999996   799999999999999999999999999998765


Q ss_pred             CCCCcc--ccccccccccccccccC-CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhh--cCChh-H--
Q 047591         1487 GVDSMK--QTMTLATIGYMAPEYGS-EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE--SLPDA-V-- 1558 (1624)
Q Consensus      1487 ~~~~~~--~~~~~gt~~y~APE~~~-~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~--~~~~~-~-- 1558 (1624)
                      ......  .....||+.|+|||++. ...++.++|||||||++|||+||+.||......+. +......  ..+.. .  
T Consensus       180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~  258 (364)
T 3qyz_A          180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGILGSPSQEDLNC  258 (364)
T ss_dssp             GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH-HHHHHHHHCSCCHHHHHT
T ss_pred             CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHH
Confidence            332211  23457999999999754 45589999999999999999999999976432221 1111110  00000 0  


Q ss_pred             ------HHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1559 ------TDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1559 ------~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                            ..... ................+...+.+++.+|++.||++|||+.|+++
T Consensus       259 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          259 IINLKARNYLL-SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             CCCHHHHHHHH-TSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhhhHHHHHH-hcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                  00000 00000000000111234567889999999999999999999986


No 265
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=1.2e-35  Score=357.35  Aligned_cols=269  Identities=23%  Similarity=0.305  Sum_probs=200.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++....  ....+.+.+|++++++++||||++++++|.+.+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            45677789999999999999886 48899999885432  3345678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCc
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      |+++++|.+++... ..+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++....... 
T Consensus       105 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-  179 (331)
T 4aaa_A          105 FVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-  179 (331)
T ss_dssp             CCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             cCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-
Confidence            99999998876543 358999999999999999999997   7999999999999999999999999999987643222 


Q ss_pred             cccccccccccccccccCCC-CcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhh--hcCChhHHHHHhhh-cc
Q 047591         1492 KQTMTLATIGYMAPEYGSEG-IVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE--ESLPDAVTDVIDAN-LL 1567 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~~~-~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~--~~~~~~~~~~~d~~-l~ 1567 (1624)
                      ......||+.|+|||++.+. .++.++|||||||++|||+||+.||......+. +.....  ........+..... ..
T Consensus       180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  258 (331)
T 4aaa_A          180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIPRHQELFNKNPVF  258 (331)
T ss_dssp             ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred             ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhhhHhhhcccc
Confidence            22345799999999988765 789999999999999999999999975432211 111111  11111111111110 00


Q ss_pred             -----CC--chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1568 -----SG--EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1568 -----~~--~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                           ..  ...........++..+.+++.+||+.||++|||++|+++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence                 00  0000111122456778999999999999999999999864


No 266
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=3.5e-35  Score=347.42  Aligned_cols=251  Identities=25%  Similarity=0.361  Sum_probs=202.4

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---------hhHHHHHHHHHHHHHhcC-CCceeEEEeeecc
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---------DRALKSFDAECEVMRRIR-HRNLAKIVSSCSN 1402 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---------~~~~~~f~~E~~~l~~l~-HpNIv~l~g~~~~ 1402 (1624)
                      .++|...+.||+|+||+||+|+.. +++.||||++....         ....+.+.+|+++++++. ||||+++++++.+
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            467888899999999999999885 58899999986432         233567899999999996 9999999999999


Q ss_pred             CCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecce
Q 047591         1403 PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIA 1482 (1624)
Q Consensus      1403 ~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla 1482 (1624)
                      .+..++||||+++|+|.+++... ..+++.++..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||++
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  171 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS  171 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             CCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccch
Confidence            99999999999999999999764 457899999999999999999996   79999999999999999999999999999


Q ss_pred             eecCCCCCccccccccccccccccccC------CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCCh
Q 047591         1483 KLLDGVDSMKQTMTLATIGYMAPEYGS------EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPD 1556 (1624)
Q Consensus      1483 ~~~~~~~~~~~~~~~gt~~y~APE~~~------~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~ 1556 (1624)
                      +......  ......||+.|+|||++.      ...++.++|||||||++|||++|+.||....... ....        
T Consensus       172 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~--------  240 (298)
T 1phk_A          172 CQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML-MLRM--------  240 (298)
T ss_dssp             EECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH--------
T ss_pred             hhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH-HHHH--------
Confidence            8775432  223457999999999864      4568999999999999999999999986532111 1111        


Q ss_pred             hHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1557 AVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1557 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                          +.........     .....++..+.+++.+|++.+|++|||+.|+++
T Consensus       241 ----~~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          241 ----IMSGNYQFGS-----PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             ----HHHTCCCCCT-----TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ----HhcCCcccCc-----ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence                1111100000     001234566889999999999999999999986


No 267
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=9.3e-36  Score=357.52  Aligned_cols=253  Identities=21%  Similarity=0.269  Sum_probs=198.4

Q ss_pred             hCCCCcC-CeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcC-CCceeEEEeeeccCCeeEE
Q 047591         1334 TNGFSES-NLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIR-HRNLAKIVSSCSNPGFKAL 1408 (1624)
Q Consensus      1334 t~~f~~~-~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~-HpNIv~l~g~~~~~~~~~l 1408 (1624)
                      .+.|... +.||+|+||+||+|+.. +++.||||++....  ....+.+.+|+.++++++ ||||+++++++.+.+..++
T Consensus        27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l  106 (327)
T 3lm5_A           27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL  106 (327)
T ss_dssp             HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence            3445544 78999999999999876 58999999986432  234578899999999994 6999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC---CCcEEEeeecceee
Q 047591         1409 ILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKL 1484 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~---~~~~kl~DFGla~~ 1484 (1624)
                      ||||+++|+|.+++... ...+++.++..|+.|++.||+|||+   .+|+||||||+|||++.   ++.+||+|||+|+.
T Consensus       107 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~  183 (327)
T 3lm5_A          107 ILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK  183 (327)
T ss_dssp             EEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEE
T ss_pred             EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCccccc
Confidence            99999999999988643 4568999999999999999999996   79999999999999998   78999999999987


Q ss_pred             cCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhh
Q 047591         1485 LDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDA 1564 (1624)
Q Consensus      1485 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 1564 (1624)
                      .....  ......||+.|+|||++....++.++|||||||++|||+||+.||......+. ...            +...
T Consensus       184 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~------------i~~~  248 (327)
T 3lm5_A          184 IGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-YLN------------ISQV  248 (327)
T ss_dssp             C-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH------------HHHT
T ss_pred             cCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-HHH------------HHhc
Confidence            75332  22345799999999999989999999999999999999999999965322111 100            0000


Q ss_pred             hccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1565 NLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1565 ~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ......     .....++..+.+++.+|++.+|++|||++|+++.
T Consensus       249 ~~~~~~-----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          249 NVDYSE-----ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             CCCCCT-----TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             ccccCc-----hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            000000     0012345567889999999999999999999863


No 268
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=2e-35  Score=375.05  Aligned_cols=249  Identities=22%  Similarity=0.306  Sum_probs=196.3

Q ss_pred             CCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEEe
Q 047591         1336 GFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1336 ~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      .|...+.||+|+||+||+|+.. ++..||||++....  ....+.+.+|++++++++|||||+++++|.+.+..++||||
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  117 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC  117 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence            4677789999999999999885 67889999986442  23457889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC---CCcEEEeeecceeecCCCC
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~---~~~~kl~DFGla~~~~~~~ 1489 (1624)
                      |++|+|.+++... ..+++..+..|+.||+.||+|||+   .+|+||||||+|||++.   ++.+||+|||+|+......
T Consensus       118 ~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~  193 (494)
T 3lij_A          118 YKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK  193 (494)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence            9999999988765 357889999999999999999996   79999999999999976   4559999999998875432


Q ss_pred             CccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCC
Q 047591         1490 SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569 (1624)
Q Consensus      1490 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 1569 (1624)
                        ......||+.|+|||++. +.++.++||||+||++|||++|+.||......+ .+......            .....
T Consensus       194 --~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~------------~~~~~  257 (494)
T 3lij_A          194 --KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE-ILRKVEKG------------KYTFD  257 (494)
T ss_dssp             --CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHT------------CCCCC
T ss_pred             --cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhC------------CCCCC
Confidence              233457999999999876 569999999999999999999999997542211 11111110            00000


Q ss_pred             chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1570 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ..     .+..++..+.+++.+|++.+|++|||+.|+++.
T Consensus       258 ~~-----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          258 SP-----EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             SG-----GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             ch-----hcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence            00     012345567899999999999999999999864


No 269
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00  E-value=8.9e-35  Score=367.98  Aligned_cols=331  Identities=23%  Similarity=0.230  Sum_probs=192.0

Q ss_pred             cccccccccccccccccCcccccccccceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEeec
Q 047591          187 KLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNL  266 (1624)
Q Consensus       187 ~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~L  266 (1624)
                      +|+.|||++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|...+.++++|++|+|
T Consensus        33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L  111 (477)
T 2id5_A           33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDI  111 (477)
T ss_dssp             TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCTTSSTTCTTCCEEEC
T ss_pred             CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC-ccCcccccCCCCCCEEEC
Confidence            4455555555555444445555555555555555555444555555555555555555554 445555555666666666


Q ss_pred             ccccccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEE
Q 047591          267 RDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLY  346 (1624)
Q Consensus       267 s~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~  346 (1624)
                      ++|++++..|..|..+++|+.|+|++|++..+        .|..+                         ..+++|++|+
T Consensus       112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~--------~~~~~-------------------------~~l~~L~~L~  158 (477)
T 2id5_A          112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYI--------SHRAF-------------------------SGLNSLEQLT  158 (477)
T ss_dssp             TTSCCCEECTTTTTTCTTCCEEEECCTTCCEE--------CTTSS-------------------------TTCTTCCEEE
T ss_pred             CCCccccCChhHccccccCCEEECCCCcccee--------Chhhc-------------------------cCCCCCCEEE
Confidence            66666666666666666666666666554322        12222                         2455666666


Q ss_pred             ecCCccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEccccccccCCCCCCcccccccccccccceeee
Q 047591          347 LWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAI  426 (1624)
Q Consensus       347 Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l  426 (1624)
                      |++|++++..+..|.++++|+.|+|++|.+++..+..|.++++|++|++++|+..                         
T Consensus       159 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~-------------------------  213 (477)
T 2id5_A          159 LEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL-------------------------  213 (477)
T ss_dssp             EESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTC-------------------------
T ss_pred             CCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccc-------------------------
Confidence            6666666655666777777777777777777776666666666666666554331                         


Q ss_pred             ccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEeccCCccCCCccchhccccccceeccccccccc
Q 047591          427 QTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQG  506 (1624)
Q Consensus       427 ~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g  506 (1624)
                            +.                         +|..+....+|++|+|++|++++..+..+..+++|++|+|++|++++
T Consensus       214 ------~~-------------------------~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~  262 (477)
T 2id5_A          214 ------DT-------------------------MTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIST  262 (477)
T ss_dssp             ------CE-------------------------ECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCE
T ss_pred             ------cc-------------------------cCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCc
Confidence                  11                         12222223356677777777764444566667777777777777776


Q ss_pred             CCCccccCCCCCceeecccccccCCCccccccccCCccccccCccccccCchhhccccccceeecccccccCCCCccccc
Q 047591          507 SIPSELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGN  586 (1624)
Q Consensus       507 ~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~  586 (1624)
                      ..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+.+|+.|+|++|.++...+.. .-
T Consensus       263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~-~~  341 (477)
T 2id5_A          263 IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLL-WV  341 (477)
T ss_dssp             ECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGH-HH
T ss_pred             cChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchH-hH
Confidence            66666666777777777777777666666777777777777777776655555556666666666666665432211 11


Q ss_pred             ccccceeeccCCcCCCCccccc
Q 047591          587 LKVLTGLYLSGNQLSCSIPSSI  608 (1624)
Q Consensus       587 l~~L~~L~Ls~N~l~g~iP~~~  608 (1624)
                      ...+..+.+.+|...|.-|..+
T Consensus       342 ~~~~~~~~~~~~~~~C~~p~~~  363 (477)
T 2id5_A          342 FRRRWRLNFNRQQPTCATPEFV  363 (477)
T ss_dssp             HTTTTSSCCTTCCCBEEESGGG
T ss_pred             HhhhhccccCccCceeCCchHH
Confidence            1223334445555555444443


No 270
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=2.9e-35  Score=384.95  Aligned_cols=244  Identities=21%  Similarity=0.261  Sum_probs=200.2

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc---hhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeE
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ---EDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKA 1407 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~---~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~ 1407 (1624)
                      ..++|...++||+|+||+||+|+.. +++.||||+++..   .....+.+.+|..++..+ +||||+++++++.+.+..+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            4567888899999999999999875 5788999998643   233456788999999987 7999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCC
Q 047591         1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~ 1487 (1624)
                      +||||+++|+|.++++..+ .+++.++..|+.||+.||+|||+   .+||||||||+|||+|.++++||+|||+|+....
T Consensus       419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~  494 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  494 (674)
T ss_dssp             EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred             EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence            9999999999999998654 58899999999999999999996   7999999999999999999999999999986533


Q ss_pred             CCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1488 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      .. ......+||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+ ....            ++.....
T Consensus       495 ~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~-~~~~------------i~~~~~~  560 (674)
T 3pfq_A          495 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQS------------IMEHNVA  560 (674)
T ss_dssp             TT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH------------HHSSCCC
T ss_pred             CC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH-HHHH------------HHhCCCC
Confidence            22 23345689999999999999999999999999999999999999997532211 1111            1111110


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNV 1603 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~ 1603 (1624)
                      -         +...+..+.+++.+|++.||++||++
T Consensus       561 ~---------p~~~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          561 Y---------PKSMSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             C---------CTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             C---------CccCCHHHHHHHHHHccCCHHHCCCC
Confidence            0         01234567889999999999999997


No 271
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.4e-35  Score=365.33  Aligned_cols=211  Identities=24%  Similarity=0.368  Sum_probs=185.2

Q ss_pred             cCHHHHHhhcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeee
Q 047591          734 ISYQELQRLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSC  809 (1624)
Q Consensus       734 ~~~~el~~~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~  809 (1624)
                      +.+++.....++|...+.||+|+||+||+|+.. +|+.||||++....   ....+.+.+|..++.+++||||+++++++
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            345666667889999999999999999999874 79999999997432   22345688999999999999999999999


Q ss_pred             ccCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeee
Q 047591          810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFG  889 (1624)
Q Consensus       810 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFG  889 (1624)
                      .+.+..|+|||||++|+|.+++...+..+++..+..++.||+.||+|||+.   +||||||||+|||+|.++.+||+|||
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFG  207 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFG  207 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeech
Confidence            999999999999999999999987666799999999999999999999984   59999999999999999999999999


Q ss_pred             eeeccCCCCCcccccccccccccCccccC-------CCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          890 ISKLLDGEDSVTQTMTLATFGYMAPEYGS-------EGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       890 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~-------~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      +|+.............+||+.|||||++.       .+.++.++|||||||++|||+||+.||..
T Consensus       208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~  272 (412)
T 2vd5_A          208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA  272 (412)
T ss_dssp             TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC
Confidence            99987655443344457999999999876       45789999999999999999999999865


No 272
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=5.1e-35  Score=354.93  Aligned_cols=268  Identities=22%  Similarity=0.247  Sum_probs=200.7

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccC-----Cee
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNP-----GFK 1406 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~-----~~~ 1406 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||++... .......+.+|++++++++||||+++++++..+     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            467888899999999999999885 5889999998643 334567889999999999999999999987654     678


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecC
Q 047591         1407 ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~ 1486 (1624)
                      ++||||++ |+|.+++...  .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+...
T Consensus        90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIID  163 (353)
T ss_dssp             EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence            99999998 6999998763  58899999999999999999996   799999999999999999999999999998765


Q ss_pred             CCCCc---------cccccccccccccccccC-CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhh---h-
Q 047591         1487 GVDSM---------KQTMTLATIGYMAPEYGS-EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE---E- 1552 (1624)
Q Consensus      1487 ~~~~~---------~~~~~~gt~~y~APE~~~-~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~---~- 1552 (1624)
                      .....         ......||+.|+|||++. ...++.++|||||||++|||++|+.||........ +.....   . 
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~  242 (353)
T 2b9h_A          164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFGIIGTP  242 (353)
T ss_dssp             ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCC
T ss_pred             cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCC
Confidence            32211         112346899999999764 47789999999999999999999999975422111 110000   0 


Q ss_pred             --------cCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1553 --------SLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1553 --------~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                              .......+.+.. +..............++..+.+++.+|++.||++|||++|+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          243 HSDNDLRCIESPRAREYIKS-LPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             CSTTTTTTCCCHHHHHHHHT-SCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             chhccccccccchhhHHhhc-ccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                    000011111110 00000000011112456778899999999999999999999863


No 273
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=3.9e-35  Score=358.44  Aligned_cols=262  Identities=22%  Similarity=0.277  Sum_probs=197.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCee-----
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFK----- 1406 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~----- 1406 (1624)
                      +.|...+.||+|+||+||+|+.. +|+.||||++...  .....+.+.+|++++++++||||+++++++...+..     
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  121 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  121 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence            56777889999999999999875 6889999998643  334567899999999999999999999999876654     


Q ss_pred             -EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeec
Q 047591         1407 -ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL 1485 (1624)
Q Consensus      1407 -~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~ 1485 (1624)
                       ++||||++ |+|.+++..   .+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+|+..
T Consensus       122 ~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~  194 (371)
T 4exu_A          122 FYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHA  194 (371)
T ss_dssp             CEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred             EEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence             99999998 688887743   48999999999999999999997   79999999999999999999999999999865


Q ss_pred             CCCCCccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhh----------cC
Q 047591         1486 DGVDSMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE----------SL 1554 (1624)
Q Consensus      1486 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~----------~~ 1554 (1624)
                      ...    .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||......+. +......          .+
T Consensus       195 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~  269 (371)
T 4exu_A          195 DAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKVTGVPGTEFVQKL  269 (371)
T ss_dssp             ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCHHHHTTC
T ss_pred             ccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCcHHHHHHh
Confidence            432    234578999999998876 7899999999999999999999999976432111 1111110          00


Q ss_pred             Chh-HHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1555 PDA-VTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1555 ~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .+. ....+. .+..............++..+.+++.+|++.||++|||++|+++.
T Consensus       270 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          270 NDKAAKSYIQ-SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             SCHHHHHHHH-HSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             hhhhhhhhhh-ccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            000 011111 111100000011112346778999999999999999999999864


No 274
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.1e-35  Score=356.57  Aligned_cols=261  Identities=25%  Similarity=0.345  Sum_probs=198.6

Q ss_pred             cccCHHHHHHHhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhc-CCCceeEEEeee
Q 047591         1323 RRISYQELRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSC 1400 (1624)
Q Consensus      1323 ~~~~~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~ 1400 (1624)
                      ..+++.++....+.|...+.||+|+||.||+|++. +++.||||++.... ...+.+.+|+++++++ +||||+++++++
T Consensus        12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            34445555566788999999999999999999884 68899999986432 2346789999999999 899999999998


Q ss_pred             cc------CCeeEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc
Q 047591         1401 SN------PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV 1473 (1624)
Q Consensus      1401 ~~------~~~~~lV~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~ 1473 (1624)
                      ..      .+..++||||+++|+|.+++... ...+++..+..++.||+.||+|||+   .+|+||||||+||+++.++.
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~  167 (326)
T 2x7f_A           91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAE  167 (326)
T ss_dssp             EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCC
T ss_pred             eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCC
Confidence            76      46789999999999999999864 3568899999999999999999997   79999999999999999999


Q ss_pred             EEEeeecceeecCCCCCccccccccccccccccccC-----CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhh
Q 047591         1474 AHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGS-----EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKH 1548 (1624)
Q Consensus      1474 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~ 1548 (1624)
                      +||+|||+++...... .......||+.|+|||++.     ...++.++|||||||++|||+||+.||.+...... ...
T Consensus       168 ~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~  245 (326)
T 2x7f_A          168 VKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-LFL  245 (326)
T ss_dssp             EEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHH
T ss_pred             EEEeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-HHH
Confidence            9999999998764322 1223457999999999876     56789999999999999999999999865422111 100


Q ss_pred             hhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1549 WVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1549 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      ......+         ....          ..++..+.+++.+||+.+|++|||+.|+++
T Consensus       246 ~~~~~~~---------~~~~----------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          246 IPRNPAP---------RLKS----------KKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHSCCC---------CCSC----------SCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hhcCccc---------cCCc----------cccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            0000000         0000          123456788999999999999999999987


No 275
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=2.5e-35  Score=373.42  Aligned_cols=250  Identities=20%  Similarity=0.288  Sum_probs=199.9

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      +.|...+.||+|+||+||+|+.. +++.||||++....  ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            35777889999999999999875 68899999986432  2345789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEec---CCCcEEEeeecceeecCCC
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld---~~~~~kl~DFGla~~~~~~ 1488 (1624)
                      |+++|+|.+++...+ .+++.++..|+.||+.||+|||+   .+|+||||||+|||++   .++.+||+|||+|+.....
T Consensus       102 ~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  177 (486)
T 3mwu_A          102 LYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (486)
T ss_dssp             CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred             cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence            999999999887653 57899999999999999999996   7999999999999995   4568999999999876433


Q ss_pred             CCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1489 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                      .  ......||+.|+|||++.+ .++.++||||+||++|||++|+.||......+ .+.......            ...
T Consensus       178 ~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~------------~~~  241 (486)
T 3mwu_A          178 T--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGK------------YAF  241 (486)
T ss_dssp             ------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTC------------CCS
T ss_pred             C--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCC------------CCC
Confidence            2  2334579999999998865 58999999999999999999999997532211 111111110            000


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ..     ..+..++..+.+++.+|++.+|++|||+.|+++.
T Consensus       242 ~~-----~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          242 DL-----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             CS-----GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             CC-----cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            00     0112345668899999999999999999999874


No 276
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=1.3e-35  Score=359.32  Aligned_cols=265  Identities=20%  Similarity=0.269  Sum_probs=204.7

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhH-----------------HHHHHHHHHHHHhcCCCceeEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRA-----------------LKSFDAECEVMRRIRHRNLAKI 1396 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~-----------------~~~f~~E~~~l~~l~HpNIv~l 1396 (1624)
                      .++|...+.||+|+||.||+|+. +++.||||++.......                 .+.|.+|++++++++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            35788889999999999999998 89999999986433211                 1789999999999999999999


Q ss_pred             EeeeccCCeeEEEEEecCCCCHHHH------HHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEec
Q 047591         1397 VSSCSNPGFKALILQYMPQGSLEKW------LYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLD 1469 (1624)
Q Consensus      1397 ~g~~~~~~~~~lV~ey~~~gsL~~~------l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld 1469 (1624)
                      ++++.+.+..++||||+++|+|.++      +... ...+++..+..++.|++.||+|||+  ..+|+||||||+||+++
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~  186 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD  186 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence            9999999999999999999999998      5542 4578999999999999999999995  37999999999999999


Q ss_pred             CCCcEEEeeecceeecCCCCCccccccccccccccccccCCC-CcCc-ccchHHHHHHHHHHHcCCCCCCCCCccchhhh
Q 047591         1470 DDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG-IVST-SGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547 (1624)
Q Consensus      1470 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~-k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~ 1547 (1624)
                      .++.+||+|||+++.....   ......||+.|+|||...+. .++. ++|||||||++|||+||+.||...........
T Consensus       187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  263 (348)
T 2pml_X          187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN  263 (348)
T ss_dssp             TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHH
T ss_pred             CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Confidence            9999999999999876432   23345799999999998876 6666 99999999999999999999975433121111


Q ss_pred             hhhhhc--CChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1548 HWVEES--LPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1548 ~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      ......  .+........ ...   ..........++..+.+++.+||+.+|++|||+.|+++
T Consensus       264 ~i~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          264 NIRTKNIEYPLDRNHFLY-PLT---NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HHTSCCCCCCCSSSSSTT-TTC---C--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHhccCcCCccchhhhhc-ccc---ccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            111111  0100000000 000   00001111335667889999999999999999999987


No 277
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=6.3e-35  Score=347.52  Aligned_cols=202  Identities=26%  Similarity=0.395  Sum_probs=178.5

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEec
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYM  822 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~  822 (1624)
                      ++|...+.||+|+||+||+|... +++.||||++........+.|.+|++++++++||||+++++++.+++..++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            56778899999999999999864 68999999986655566778999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCcc-
Q 047591          823 PQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT-  901 (1624)
Q Consensus       823 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~-  901 (1624)
                      ++|+|.++++.....+++.++..|+.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++......... 
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  166 (310)
T 3s95_A           90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE  166 (310)
T ss_dssp             TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred             CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence            99999999988767899999999999999999999994   59999999999999999999999999998765432211 


Q ss_pred             ------------cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          902 ------------QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       902 ------------~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                                  .....||+.|+|||++....++.++|||||||++|||++|..|+...
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~  225 (310)
T 3s95_A          167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY  225 (310)
T ss_dssp             -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred             ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence                        11346999999999999999999999999999999999999998654


No 278
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=2e-35  Score=359.82  Aligned_cols=263  Identities=22%  Similarity=0.248  Sum_probs=183.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccC------Ce
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNP------GF 1405 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~------~~ 1405 (1624)
                      ++|...+.||+|+||+||+|... +|+.||||++...  .....+++.+|++++++++||||+++++++...      ..
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  108 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND  108 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence            67888899999999999999864 6889999998643  334567889999999999999999999998654      56


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeec
Q 047591         1406 KALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL 1485 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~ 1485 (1624)
                      .++||||+ +++|.+++..  ..+++..+..++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+|+..
T Consensus       109 ~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~  182 (367)
T 2fst_X          109 VYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT  182 (367)
T ss_dssp             CEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred             EEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence            79999999 6899998865  358999999999999999999996   79999999999999999999999999999875


Q ss_pred             CCCCCccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhh----------cC
Q 047591         1486 DGVDSMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE----------SL 1554 (1624)
Q Consensus      1486 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~----------~~ 1554 (1624)
                      ...    .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+....+ .+......          .+
T Consensus       183 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~~  257 (367)
T 2fst_X          183 ADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLKKI  257 (367)
T ss_dssp             ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHTTC
T ss_pred             ccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHh
Confidence            422    234579999999998766 678999999999999999999999997542211 11111110          00


Q ss_pred             -ChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1555 -PDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1555 -~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                       .....+.+. .+..............+...+.+++.+|++.||++|||+.|+++.
T Consensus       258 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          258 SSESARNYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             CCHHHHHHHH-TSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhHHHHHHHh-ccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence             001111111 000000000001112335668899999999999999999999863


No 279
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=8.3e-35  Score=358.83  Aligned_cols=265  Identities=20%  Similarity=0.260  Sum_probs=198.2

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcC--------CCceeEEEeeec----
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIR--------HRNLAKIVSSCS---- 1401 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~--------HpNIv~l~g~~~---- 1401 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||+++.. ....+.+.+|++++++++        ||||+++++++.    
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            56888899999999999999874 5788999998643 344578899999999986        788999999987    


Q ss_pred             cCCeeEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCC-ceEEcCCCCCcEEecCCC-------
Q 047591         1402 NPGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYST-SIIHCDLKPSNVLLDDDM------- 1472 (1624)
Q Consensus      1402 ~~~~~~lV~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~-~iiHrDlK~~NILld~~~------- 1472 (1624)
                      +....++||||+ +|++.+++... ...+++..+..|+.||+.||+|||+   . +|+||||||+|||++.++       
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~~~  191 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRRLA  191 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred             CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhhhh
Confidence            556789999999 56666666544 3568999999999999999999997   5 899999999999999775       


Q ss_pred             ------------------------------------------cEEEeeecceeecCCCCCccccccccccccccccccCC
Q 047591         1473 ------------------------------------------VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSE 1510 (1624)
Q Consensus      1473 ------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~ 1510 (1624)
                                                                .+||+|||+|+.....    .....||+.|||||++.+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~  267 (397)
T 1wak_A          192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIG  267 (397)
T ss_dssp             HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHT
T ss_pred             hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcC
Confidence                                                      8999999999876432    234579999999999988


Q ss_pred             CCcCcccchHHHHHHHHHHHcCCCCCCCCCccch-----hhhhhhh--hcCChhHHHH--HhhhccC-------------
Q 047591         1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEV-----CLKHWVE--ESLPDAVTDV--IDANLLS------------- 1568 (1624)
Q Consensus      1511 ~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~-----~l~~~~~--~~~~~~~~~~--~d~~l~~------------- 1568 (1624)
                      ..++.++|||||||++|||+||+.||........     .+.....  ...+......  .......             
T Consensus       268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (397)
T 1wak_A          268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP  347 (397)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred             CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence            8899999999999999999999999975322111     0111100  0111110000  0000000             


Q ss_pred             -CchHH---HHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1569 -GEEEA---DIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1569 -~~~~~---~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                       ...+.   .......+...+.+++.+||+.||++|||++|+++
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence             00000   00001345667889999999999999999999986


No 280
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.4e-35  Score=375.77  Aligned_cols=249  Identities=24%  Similarity=0.353  Sum_probs=201.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      +.|...+.||+|+||+||+|+.. +|+.||||++....   ....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            35677789999999999999886 68999999985432   334678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe---cCCCcEEEeeecceeecCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl---d~~~~~kl~DFGla~~~~~ 1487 (1624)
                      ||+++|+|.+++...+ .+++..+..|+.||+.||+|||+   .+|+||||||+|||+   +.++.+||+|||+|+....
T Consensus       106 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  181 (484)
T 3nyv_A          106 EVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA  181 (484)
T ss_dssp             CCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred             ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence            9999999999997654 57899999999999999999997   799999999999999   5678999999999987654


Q ss_pred             CCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhcc
Q 047591         1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567 (1624)
Q Consensus      1488 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 1567 (1624)
                      ..  ......||+.|+|||++.+ .++.++||||+||++|||+||+.||......+ .+......            ...
T Consensus       182 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~------------~~~  245 (484)
T 3nyv_A          182 SK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD-ILKKVEKG------------KYT  245 (484)
T ss_dssp             CC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHC------------CCC
T ss_pred             cc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcC------------CCC
Confidence            32  2334579999999998765 68999999999999999999999997532211 11111111            000


Q ss_pred             CCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1568 SGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1568 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      ...     +.+..++..+.+++.+|++.+|++|||+.|+++
T Consensus       246 ~~~-----~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          246 FEL-----PQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             CCS-----GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCC-----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            000     011234566889999999999999999999986


No 281
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=2.9e-35  Score=348.44  Aligned_cols=251  Identities=24%  Similarity=0.340  Sum_probs=190.9

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeecc-----------
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN----------- 1402 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~----------- 1402 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+           
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            45777889999999999999875 6899999998643 3445789999999999999999999998754           


Q ss_pred             --CCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeec
Q 047591         1403 --PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFG 1480 (1624)
Q Consensus      1403 --~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFG 1480 (1624)
                        .+..++||||+++|+|.+++...+..+++.++..++.|+++||+|||+   .+|+||||||+||+++.++.+||+|||
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg  161 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFG  161 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEeeCc
Confidence              356799999999999999998777778889999999999999999997   799999999999999999999999999


Q ss_pred             ceeecCCCC-------------CccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhh
Q 047591         1481 IAKLLDGVD-------------SMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCL 1546 (1624)
Q Consensus      1481 la~~~~~~~-------------~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l 1546 (1624)
                      +++......             ........||+.|+|||++.+ +.++.++|||||||++|||++   |+..........
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~  238 (303)
T 1zy4_A          162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNIL  238 (303)
T ss_dssp             CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHH
T ss_pred             chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHH
Confidence            998664221             112234569999999998865 478999999999999999998   543211110001


Q ss_pred             hhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1547 KHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1547 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ... ...         ........       ...++..+.+++.+||+.||++|||+.|+++.
T Consensus       239 ~~~-~~~---------~~~~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          239 KKL-RSV---------SIEFPPDF-------DDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHH-HST---------TCCCCTTC-------CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             Hhc-ccc---------ccccCccc-------cccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            100 000         00000000       01234557889999999999999999999874


No 282
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=1.3e-35  Score=353.90  Aligned_cols=258  Identities=21%  Similarity=0.347  Sum_probs=199.0

Q ss_pred             HHHHHHHhCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccc--hhhHHHHHHHHHHHHHhcC--CCceeEEEeeecc
Q 047591         1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIR--HRNLAKIVSSCSN 1402 (1624)
Q Consensus      1327 ~~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~--HpNIv~l~g~~~~ 1402 (1624)
                      ++.+....+.|...+.||+|+||.||+|+..+++.||||++...  .....+.|.+|++++++++  ||||+++++++.+
T Consensus        20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~   99 (313)
T 3cek_A           20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT   99 (313)
T ss_dssp             CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred             eeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence            33444455678888999999999999999888999999998643  3445678999999999997  5999999999999


Q ss_pred             CCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecce
Q 047591         1403 PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIA 1482 (1624)
Q Consensus      1403 ~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla 1482 (1624)
                      ++..++||| +.+|+|.+++...+ .+++.++..++.|+++||+|||+   .+|+||||||+||++++ +.+||+|||++
T Consensus       100 ~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~  173 (313)
T 3cek_A          100 DQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIA  173 (313)
T ss_dssp             SSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSS
T ss_pred             CCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeecccc
Confidence            999999999 67889999998654 57889999999999999999996   79999999999999975 89999999999


Q ss_pred             eecCCCCC-ccccccccccccccccccCC-----------CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhh
Q 047591         1483 KLLDGVDS-MKQTMTLATIGYMAPEYGSE-----------GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWV 1550 (1624)
Q Consensus      1483 ~~~~~~~~-~~~~~~~gt~~y~APE~~~~-----------~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~ 1550 (1624)
                      +....... .......||+.|+|||....           ..++.++|||||||++|||+||+.||.........+.   
T Consensus       174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~---  250 (313)
T 3cek_A          174 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH---  250 (313)
T ss_dssp             CC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH---
T ss_pred             ccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHH---
Confidence            87643322 12234579999999998765           4788999999999999999999999975432211111   


Q ss_pred             hhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1551 EESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                               ..++........       ..++..+.+++.+||+.+|++|||++|+++.
T Consensus       251 ---------~~~~~~~~~~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          251 ---------AIIDPNHEIEFP-------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             ---------HHHCTTSCCCCC-------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ---------HHHhcccccCCc-------ccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence                     111111110000       1123457889999999999999999999864


No 283
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=5.3e-35  Score=349.25  Aligned_cols=267  Identities=21%  Similarity=0.299  Sum_probs=195.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeec------------
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS------------ 1401 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~------------ 1401 (1624)
                      ++|...+.||+|+||.||+|+.. +++.||||++........+.+.+|++++++++||||+++++++.            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            56777889999999999999886 48899999987666667788999999999999999999999873            


Q ss_pred             --cCCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEec-CCCcEEEee
Q 047591         1402 --NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLD-DDMVAHLGD 1478 (1624)
Q Consensus      1402 --~~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld-~~~~~kl~D 1478 (1624)
                        +.+..++||||++ |+|.+++..  ..+++..+..++.|++.||+|||+   .+|+||||||+||+++ +++.+||+|
T Consensus        91 ~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~D  164 (320)
T 2i6l_A           91 LTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGD  164 (320)
T ss_dssp             CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEECC
T ss_pred             ccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEcc
Confidence              3467899999998 699999864  357889999999999999999996   7999999999999997 567999999


Q ss_pred             ecceeecCCCCC--ccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhc--
Q 047591         1479 FGIAKLLDGVDS--MKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEES-- 1553 (1624)
Q Consensus      1479 FGla~~~~~~~~--~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~-- 1553 (1624)
                      ||+++.......  .......||+.|+|||.... ..++.++|||||||++|||+||+.||......+ .........  
T Consensus       165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~  243 (320)
T 2i6l_A          165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILESIPV  243 (320)
T ss_dssp             CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHSCC
T ss_pred             CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCC
Confidence            999987643211  12234568999999997654 678999999999999999999999997643211 111111110  


Q ss_pred             CChh-HHHHH-------hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1554 LPDA-VTDVI-------DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1554 ~~~~-~~~~~-------d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      .... ..+..       ........ .........++..+.+++.+|++.||++|||++|+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          244 VHEEDRQELLSVIPVYIRNDMTEPH-KPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             CCHHHHHHHHTTSCHHHHHHTTSCC-CCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             CchhhhhhhhhcCcccccccccCCC-CChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            0000 00100       00000000 00001112356778999999999999999999999863


No 284
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=2.7e-36  Score=360.60  Aligned_cols=260  Identities=22%  Similarity=0.338  Sum_probs=200.4

Q ss_pred             HHhCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEE
Q 047591         1332 LATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALI 1409 (1624)
Q Consensus      1332 ~at~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV 1409 (1624)
                      ...++|...+.||+|+||+||+|++.+  .+|+|+++...  ....+.|.+|+.++++++||||+++++++.+++..++|
T Consensus        30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv  107 (319)
T 2y4i_B           30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII  107 (319)
T ss_dssp             SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred             CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence            345678888999999999999998753  59999986432  23346688999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCC
Q 047591         1410 LQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~ 1489 (1624)
                      |||+++|+|.+++...+..+++.++..++.|++.||+|||+   .+|+||||||+||+++ ++.+||+|||+++......
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~  183 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ  183 (319)
T ss_dssp             CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred             eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence            99999999999998776678999999999999999999997   7999999999999998 6799999999987653211


Q ss_pred             ----CccccccccccccccccccCC---------CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCCh
Q 047591         1490 ----SMKQTMTLATIGYMAPEYGSE---------GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPD 1556 (1624)
Q Consensus      1490 ----~~~~~~~~gt~~y~APE~~~~---------~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~ 1556 (1624)
                          ........||+.|+|||....         ..++.++|||||||++|||+||+.||........ .........  
T Consensus       184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~--  260 (319)
T 2y4i_B          184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI-IWQMGTGMK--  260 (319)
T ss_dssp             ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH-HHHHHTTCC--
T ss_pred             ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHhccCCC--
Confidence                112233469999999998754         4578999999999999999999999975422111 100000000  


Q ss_pred             hHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHHH
Q 047591         1557 AVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKF 1617 (1624)
Q Consensus      1557 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~~ 1617 (1624)
                             +....          ..++..+.+++.+||+.+|++|||+.|+++.|+++..+.
T Consensus       261 -------~~~~~----------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          261 -------PNLSQ----------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             -------CCCCC----------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred             -------CCCCc----------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence                   00000          013345788999999999999999999999999987653


No 285
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=2.1e-34  Score=342.02  Aligned_cols=249  Identities=20%  Similarity=0.295  Sum_probs=196.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch----hhHHHHHHHHHHHHHhcCCCceeEEEeeec--cCCeeE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE----DRALKSFDAECEVMRRIRHRNLAKIVSSCS--NPGFKA 1407 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~----~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~--~~~~~~ 1407 (1624)
                      ++|...+.||+|+||.||+|... +++.||||++....    ....+.+.+|++++++++||||+++++++.  +.+..+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            57888999999999999999875 57899999986543    234578999999999999999999999984  456789


Q ss_pred             EEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecC
Q 047591         1408 LILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1408 lV~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~ 1486 (1624)
                      +||||+++| +.+++... ...+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++...
T Consensus        85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~  160 (305)
T 2wtk_C           85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALH  160 (305)
T ss_dssp             EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence            999999987 77777643 4568999999999999999999996   799999999999999999999999999998765


Q ss_pred             CCC-CccccccccccccccccccCCC--CcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHh
Q 047591         1487 GVD-SMKQTMTLATIGYMAPEYGSEG--IVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563 (1624)
Q Consensus      1487 ~~~-~~~~~~~~gt~~y~APE~~~~~--~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d 1563 (1624)
                      ... ........||+.|+|||+..+.  .++.++|||||||++|||+||+.||......+  .            .+.+.
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~------------~~~i~  226 (305)
T 2wtk_C          161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK--L------------FENIG  226 (305)
T ss_dssp             TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--H------------HHHHH
T ss_pred             ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH--H------------HHHHh
Confidence            322 1222345699999999987653  34789999999999999999999997532110  0            00111


Q ss_pred             hhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1564 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ......        +..++..+.+++.+||+.||++|||+.|+++.
T Consensus       227 ~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          227 KGSYAI--------PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HCCCCC--------CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             cCCCCC--------CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            100000        01234567889999999999999999999864


No 286
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=2.2e-35  Score=365.21  Aligned_cols=193  Identities=22%  Similarity=0.295  Sum_probs=151.3

Q ss_pred             CCeEeecCceEEEEEEEc---CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeee--ccCCeeEEEEEecC
Q 047591         1340 SNLLGTGIFSSVYKATFA---DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSC--SNPGFKALILQYMP 1414 (1624)
Q Consensus      1340 ~~~lG~G~~G~Vyk~~~~---~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~--~~~~~~~lV~ey~~ 1414 (1624)
                      .++||+|+||+||+|++.   +++.||||++....  ..+.+.+|++++++++|||||++++++  ......++||||++
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~  103 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE  103 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence            458999999999999976   47889999986432  235788999999999999999999998  45778999999997


Q ss_pred             CCCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe----cCCCcEEEeeecce
Q 047591         1415 QGSLEKWLYSH--------NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL----DDDMVAHLGDFGIA 1482 (1624)
Q Consensus      1415 ~gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl----d~~~~~kl~DFGla 1482 (1624)
                       |+|.+++...        ...+++..+..|+.||+.||+|||+   .+|+||||||+|||+    +.++.+||+|||+|
T Consensus       104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  179 (405)
T 3rgf_A          104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA  179 (405)
T ss_dssp             -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred             -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence             5888877532        1248899999999999999999996   789999999999999    77899999999999


Q ss_pred             eecCCCCC--ccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCC
Q 047591         1483 KLLDGVDS--MKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDD 1538 (1624)
Q Consensus      1483 ~~~~~~~~--~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~ 1538 (1624)
                      +.......  .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus       180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  238 (405)
T 3rgf_A          180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  238 (405)
T ss_dssp             C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence            87653221  22234679999999998876 4589999999999999999999999964


No 287
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=3e-35  Score=362.09  Aligned_cols=207  Identities=22%  Similarity=0.316  Sum_probs=180.7

Q ss_pred             HHHHHhhcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeecc
Q 047591          736 YQELQRLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSN  811 (1624)
Q Consensus       736 ~~el~~~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~  811 (1624)
                      ++++....++|...+.||+|+||+||+|+.. +++.||||++....   ....+.+.+|+.+++.++|||||+++++|.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            4556667889999999999999999999875 58999999987432   1233568899999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeee
Q 047591          812 HGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGIS  891 (1624)
Q Consensus       812 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla  891 (1624)
                      ++..|+|||||++|+|.++++..  .+++..+..++.|++.||+|||+.   +|+||||||+|||+|.++.+||+|||+|
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a  215 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTC  215 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecccee
Confidence            99999999999999999999764  588999999999999999999994   5999999999999999999999999999


Q ss_pred             eccCCCCCcccccccccccccCccccCCCC----CCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          892 KLLDGEDSVTQTMTLATFGYMAPEYGSEGI----VSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       892 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      +.............+||+.|||||++....    ++.++|||||||++|||+||+.||..
T Consensus       216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~  275 (410)
T 3v8s_A          216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA  275 (410)
T ss_dssp             EECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             EeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence            887655433344567999999999876544    78999999999999999999999864


No 288
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=8.1e-35  Score=358.32  Aligned_cols=264  Identities=22%  Similarity=0.311  Sum_probs=192.2

Q ss_pred             CCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCC------eeEEE
Q 047591         1336 GFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG------FKALI 1409 (1624)
Q Consensus      1336 ~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~------~~~lV 1409 (1624)
                      .|...++||+|+||+||+|+...+..||+|++.....    ...+|+++++.++|||||++++++...+      ..++|
T Consensus        41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv  116 (394)
T 4e7w_A           41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV  116 (394)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence            4677789999999999999997777789887753321    2246999999999999999999985432      37899


Q ss_pred             EEecCCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEec-CCCcEEEeeecceeecC
Q 047591         1410 LQYMPQGSLEKWLY--SHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLD-DDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1410 ~ey~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld-~~~~~kl~DFGla~~~~ 1486 (1624)
                      |||++++.+....+  .....+++..+..++.||++||+|||+   .+|+||||||+|||++ .++.+||+|||+|+...
T Consensus       117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~  193 (394)
T 4e7w_A          117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI  193 (394)
T ss_dssp             EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence            99998754443332  235578999999999999999999996   7999999999999999 79999999999999875


Q ss_pred             CCCCccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhc-CC-hhHHHHHh
Q 047591         1487 GVDSMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEES-LP-DAVTDVID 1563 (1624)
Q Consensus      1487 ~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~-~~-~~~~~~~d 1563 (1624)
                      ...  ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ .+...+... .+ .......+
T Consensus       194 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~~~  270 (394)
T 4e7w_A          194 AGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGTPSREQIKTMN  270 (394)
T ss_dssp             TTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHC
T ss_pred             CCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhhC
Confidence            332  2334578999999998765 458999999999999999999999997643221 111111100 00 00001111


Q ss_pred             hhccCC------chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1564 ANLLSG------EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1564 ~~l~~~------~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      +.....      ........+..++..+.+++.+|++.||++|||+.|+++.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            111000      0000000111245678999999999999999999999864


No 289
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=2.4e-34  Score=346.34  Aligned_cols=265  Identities=20%  Similarity=0.276  Sum_probs=202.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEE--cCCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCc------eeEEEeeeccCCee
Q 047591         1335 NGFSESNLLGTGIFSSVYKATF--ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRN------LAKIVSSCSNPGFK 1406 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~--~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpN------Iv~l~g~~~~~~~~ 1406 (1624)
                      ++|...+.||+|+||+||+|..  .+++.||||+++.. ....+.+.+|++++++++|++      ++++++++.+.+..
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            5678889999999999999987  35788999998643 344577899999999998765      99999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC---------------
Q 047591         1407 ALILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD--------------- 1470 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~--------------- 1470 (1624)
                      ++||||+ +++|.+++...+ ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.               
T Consensus        93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~  168 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDE  168 (339)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred             EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence            9999999 899999998654 358899999999999999999996   79999999999999987               


Q ss_pred             ----CCcEEEeeecceeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhh
Q 047591         1471 ----DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCL 1546 (1624)
Q Consensus      1471 ----~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l 1546 (1624)
                          ++.+||+|||+|+.....    .....||+.|+|||++.+..++.++|||||||++|||+||+.||......+. .
T Consensus       169 ~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~  243 (339)
T 1z57_A          169 RTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH-L  243 (339)
T ss_dssp             EEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH-H
T ss_pred             ccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH-H
Confidence                668999999999875432    2345799999999999888999999999999999999999999975422211 1


Q ss_pred             hhh--hhhcCChhHHHHHh-hhc--------cCCchHHH------------HHHHHHhHHHHHHHHHHccccCCCCCCCH
Q 047591         1547 KHW--VEESLPDAVTDVID-ANL--------LSGEEEAD------------IAAKKKCMSSVMSLALKCSEEIPEERMNV 1603 (1624)
Q Consensus      1547 ~~~--~~~~~~~~~~~~~d-~~l--------~~~~~~~~------------~~~~~~~~~~~~~l~~~C~~~~P~~RPt~ 1603 (1624)
                      ...  .....+........ ...        ........            ......++..+.+++.+|++.||++|||+
T Consensus       244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  323 (339)
T 1z57_A          244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL  323 (339)
T ss_dssp             HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence            111  11111211110000 000        00000000            00011345678999999999999999999


Q ss_pred             HHHHHH
Q 047591         1604 KDALAN 1609 (1624)
Q Consensus      1604 ~evl~~ 1609 (1624)
                      +|+++.
T Consensus       324 ~ell~h  329 (339)
T 1z57_A          324 REALKH  329 (339)
T ss_dssp             HHHTTS
T ss_pred             HHHhcC
Confidence            999864


No 290
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1.3e-34  Score=346.38  Aligned_cols=210  Identities=27%  Similarity=0.338  Sum_probs=186.0

Q ss_pred             cccCHHHHHhhcCC----------CCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCC
Q 047591          732 RRISYQELQRLTDG----------FSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHR  800 (1624)
Q Consensus       732 ~~~~~~el~~~t~~----------f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~  800 (1624)
                      ..+++++++.+++.          |...+.||+|+||+||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            46888898888865          566679999999999999875 7999999999876666667899999999999999


Q ss_pred             ceeeeeeeeccCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCC
Q 047591          801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDD  880 (1624)
Q Consensus       801 niv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~  880 (1624)
                      ||+++++++...+..++||||+++|+|.+++..  ..+++.++..++.|+++||+|||+.   +|+||||||+||+++.+
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~  177 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLD  177 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTT
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC
Confidence            999999999999999999999999999999864  3689999999999999999999984   59999999999999999


Q ss_pred             CceEEEeeeeeeccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          881 TVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       881 ~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      +.+||+|||+++........ .....||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       178 ~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~  243 (321)
T 2c30_A          178 GRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS  243 (321)
T ss_dssp             CCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            99999999999876543222 2345799999999999988999999999999999999999999864


No 291
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.1e-34  Score=360.03  Aligned_cols=262  Identities=24%  Similarity=0.317  Sum_probs=191.9

Q ss_pred             CCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeecc----C--CeeEE
Q 047591         1336 GFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN----P--GFKAL 1408 (1624)
Q Consensus      1336 ~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~----~--~~~~l 1408 (1624)
                      .|...++||+|+||+||+|++. +|+.||||++....    +.+.+|++++++++|||||+++++|..    .  ...++
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            4667789999999999999985 58999999885432    223579999999999999999998843    2  23679


Q ss_pred             EEEecCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCC-CcEEEeeecceee
Q 047591         1409 ILQYMPQGSLEKWLY---SHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDD-MVAHLGDFGIAKL 1484 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~-~~~kl~DFGla~~ 1484 (1624)
                      ||||+++ ++.+.+.   .....+++..+..++.||++||+|||+   .+|+||||||+|||++.+ +.+||+|||+|+.
T Consensus       131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~  206 (420)
T 1j1b_A          131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  206 (420)
T ss_dssp             EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence            9999986 6666654   345678999999999999999999995   799999999999999965 6789999999997


Q ss_pred             cCCCCCccccccccccccccccccCCC-CcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcC-C--hhHHH
Q 047591         1485 LDGVDSMKQTMTLATIGYMAPEYGSEG-IVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESL-P--DAVTD 1560 (1624)
Q Consensus      1485 ~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~-~--~~~~~ 1560 (1624)
                      +....  ......||+.|||||++.+. .++.++|||||||++|||++|+.||.+....+ .+..++...- +  +.+.+
T Consensus       207 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~i~~~lg~p~~~~~~~  283 (420)
T 1j1b_A          207 LVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIRE  283 (420)
T ss_dssp             CCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHHH
T ss_pred             cccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHh
Confidence            65332  22345799999999988654 79999999999999999999999997642211 1222211100 0  11111


Q ss_pred             HHhhhccCC------chHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1561 VIDANLLSG------EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1561 ~~d~~l~~~------~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                       .++.....      ............+..+.+|+.+|++.||++|||+.|+++.
T Consensus       284 -~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          284 -MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             -HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             -hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence             11100000      0000000011235678899999999999999999999863


No 292
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=6.1e-35  Score=350.03  Aligned_cols=269  Identities=23%  Similarity=0.319  Sum_probs=199.9

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEE--cCCceEEEEEeccch--hhHHHHHHHHHHHHHhc---CCCceeEEEeeec----
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATF--ADGTNAAIKIFSLQE--DRALKSFDAECEVMRRI---RHRNLAKIVSSCS---- 1401 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~--~~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l---~HpNIv~l~g~~~---- 1401 (1624)
                      +.++|...+.||+|+||+||+|+.  .+|+.||||+++...  ......+.+|+++++++   +||||++++++|.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            456788899999999999999988  357889999986432  22234567788887776   8999999999986    


Q ss_pred             -cCCeeEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeee
Q 047591         1402 -NPGFKALILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDF 1479 (1624)
Q Consensus      1402 -~~~~~~lV~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DF 1479 (1624)
                       .....++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+||
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Df  164 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADF  164 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecC
Confidence             5567899999998 69999998653 458999999999999999999997   79999999999999999999999999


Q ss_pred             cceeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhh-cCCh--
Q 047591         1480 GIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE-SLPD-- 1556 (1624)
Q Consensus      1480 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~-~~~~-- 1556 (1624)
                      |+++.....  .......||+.|+|||+..+..++.++|||||||++|||+||+.||........ +...+.. ..+.  
T Consensus       165 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~  241 (326)
T 1blx_A          165 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILDVIGLPGEE  241 (326)
T ss_dssp             CSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCGG
T ss_pred             cccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHcCCCCcc
Confidence            999876422  123345789999999999888999999999999999999999999975432111 1111100 0000  


Q ss_pred             hHHHHH---hhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1557 AVTDVI---DANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1557 ~~~~~~---d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      .+....   ..................++..+.+++.+||+.+|++|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            000000   0000000000000001124566789999999999999999999985


No 293
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=1.1e-34  Score=353.15  Aligned_cols=276  Identities=21%  Similarity=0.234  Sum_probs=191.4

Q ss_pred             HHHHHHhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCe-
Q 047591         1328 QELRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGF- 1405 (1624)
Q Consensus      1328 ~~l~~at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~- 1405 (1624)
                      .+.....++|...+.||+|+||+||+|+.. +++.||||++... ......+.+|++.++.++||||+++++++...+. 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            344566788999999999999999999885 6889999988533 2233567788888999999999999999865332 


Q ss_pred             ------eEEEEEecCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC-CCcEE
Q 047591         1406 ------KALILQYMPQGSLEKWLY---SHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD-DMVAH 1475 (1624)
Q Consensus      1406 ------~~lV~ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~-~~~~k 1475 (1624)
                            .++||||+++ +|.+.+.   .....+++..+..++.|++.||+|||. +..+|+||||||+|||++. ++.+|
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~k  172 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLK  172 (360)
T ss_dssp             CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred             cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEE
Confidence                  7899999986 5555444   245568889999999999999999993 2489999999999999997 89999


Q ss_pred             EeeecceeecCCCCCccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhc-
Q 047591         1476 LGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEES- 1553 (1624)
Q Consensus      1476 l~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~- 1553 (1624)
                      |+|||+|+......  ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...... ..+..++... 
T Consensus       173 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~  249 (360)
T 3e3p_A          173 LCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLG  249 (360)
T ss_dssp             ECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC
T ss_pred             EeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcC
Confidence            99999998765432  2334578999999998755 45899999999999999999999999764322 1122221110 


Q ss_pred             -CChhHHHHHhhhccC-------CchHHHH--HHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1554 -LPDAVTDVIDANLLS-------GEEEADI--AAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1554 -~~~~~~~~~d~~l~~-------~~~~~~~--~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                       .+......+++....       .......  .....++..+.+++.+|++.||++|||+.|+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence             111111111111000       0000000  0001245678999999999999999999999864


No 294
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=2.4e-34  Score=353.01  Aligned_cols=200  Identities=23%  Similarity=0.266  Sum_probs=172.5

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcC-CC-----ceeEEEeeeccCCe
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIR-HR-----NLAKIVSSCSNPGF 1405 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~-Hp-----NIv~l~g~~~~~~~ 1405 (1624)
                      ..++|...+.||+|+||+||+|+.. +++.||||+++.. ....+++.+|+++++.++ |+     +|+++++++...+.
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            4578888999999999999999875 5788999998643 334567888999999885 55     49999999999999


Q ss_pred             eEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEec--CCCcEEEeeecce
Q 047591         1406 KALILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLD--DDMVAHLGDFGIA 1482 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld--~~~~~kl~DFGla 1482 (1624)
                      .++||||++ |+|.+++.... ..+++..+..++.|++.||+|||. +..+||||||||+|||++  .++.+||+|||+|
T Consensus       131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a  208 (382)
T 2vx3_A          131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS  208 (382)
T ss_dssp             EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence            999999996 59999998654 458999999999999999999994 247899999999999994  5788999999999


Q ss_pred             eecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCC
Q 047591         1483 KLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDM 1539 (1624)
Q Consensus      1483 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~ 1539 (1624)
                      +.....    .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus       209 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          209 CQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             EETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             eecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            876432    23457999999999999989999999999999999999999999754


No 295
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=2.2e-34  Score=340.68  Aligned_cols=199  Identities=29%  Similarity=0.399  Sum_probs=179.5

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      .++|...+.||+|+||+||+|.. .+|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            46799999999999999999985 57899999999876655667889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCcc
Q 047591          822 MPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT  901 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~  901 (1624)
                      +++|+|.+++...  .+++.++..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++........ 
T Consensus        99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-  172 (297)
T 3fxz_A           99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-  172 (297)
T ss_dssp             CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-
T ss_pred             CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc-
Confidence            9999999999764  588999999999999999999994   5999999999999999999999999999877554332 


Q ss_pred             cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          902 QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       902 ~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .....||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  218 (297)
T 3fxz_A          173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN  218 (297)
T ss_dssp             BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            3345799999999999888999999999999999999999999864


No 296
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.2e-34  Score=349.55  Aligned_cols=203  Identities=27%  Similarity=0.421  Sum_probs=169.9

Q ss_pred             hhcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          741 RLTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       741 ~~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      ...++|...+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus         7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv   86 (347)
T 3zgw_A            7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV   86 (347)
T ss_dssp             TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence            3567899999999999999999985 579999999987543 23346789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++|+|.+++...+ .+++.++..++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+|+......
T Consensus        87 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~  162 (347)
T 3zgw_A           87 LEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK  162 (347)
T ss_dssp             EECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred             EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence            99999999999997654 689999999999999999999994   59999999999999999999999999998765443


Q ss_pred             CcccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .......+||+.|+|||++.+..+ +.++||||+||++|||+||+.||..
T Consensus       163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~  212 (347)
T 3zgw_A          163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD  212 (347)
T ss_dssp             ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence            333344579999999999877665 8999999999999999999999965


No 297
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=4.3e-35  Score=351.70  Aligned_cols=254  Identities=25%  Similarity=0.294  Sum_probs=177.8

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch-hhHHHHHHHHHH-HHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE-DRALKSFDAECE-VMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~-~~~~~~f~~E~~-~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||+++... ....+++.+|+. +++.++||||+++++++.+++..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            356777899999999999999885 68899999986542 334455666666 677889999999999999999999999


Q ss_pred             EecCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-ceEEcCCCCCcEEecCCCcEEEeeecceeec
Q 047591         1411 QYMPQGSLEKWLYS----HNYLLNIEQRLDIMIDVACALEYLHQGYST-SIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL 1485 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~-~iiHrDlK~~NILld~~~~~kl~DFGla~~~ 1485 (1624)
                      ||+++ +|.+++..    ....+++..+..++.|++.||+|||+   . +|+||||||+||+++.++.+||+|||+++..
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            99985 88877753    24568999999999999999999997   5 8999999999999999999999999999876


Q ss_pred             CCCCCcccccccccccccccccc----CCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHH
Q 047591         1486 DGVDSMKQTMTLATIGYMAPEYG----SEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDV 1561 (1624)
Q Consensus      1486 ~~~~~~~~~~~~gt~~y~APE~~----~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~ 1561 (1624)
                      ....  ......||+.|+|||++    .+..++.++|||||||++|||+||+.||.........+........+      
T Consensus       177 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------  248 (327)
T 3aln_A          177 VDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPP------  248 (327)
T ss_dssp             -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCC------
T ss_pred             cccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCC------
Confidence            4322  22334699999999987    46678999999999999999999999997532111111111110000      


Q ss_pred             HhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1562 IDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1562 ~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                         .+....       ...++..+.+++.+||+.||++|||+.|+++.
T Consensus       249 ---~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          249 ---QLSNSE-------EREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             ---CCCCCS-------SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             ---CCCCcc-------cccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence               000000       01234568899999999999999999999763


No 298
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=2.4e-34  Score=345.81  Aligned_cols=199  Identities=26%  Similarity=0.375  Sum_probs=176.3

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||+++...   ....+.+.+|+.++++++||||+++++++.+.+..|+||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            57888899999999999999865 68999999997542   234567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||+++|+|.+++...+ .+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+|+.......
T Consensus        85 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  160 (337)
T 1o6l_A           85 EYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             ECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred             eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence            9999999999997643 689999999999999999999984   599999999999999999999999999986433222


Q ss_pred             cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                       .....+||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       161 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  207 (337)
T 1o6l_A          161 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  207 (337)
T ss_dssp             -CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC
Confidence             22345799999999999988999999999999999999999999864


No 299
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=1.1e-34  Score=361.56  Aligned_cols=248  Identities=21%  Similarity=0.278  Sum_probs=184.4

Q ss_pred             CCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeEEEEEecCC
Q 047591         1337 FSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQ 1415 (1624)
Q Consensus      1337 f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~lV~ey~~~ 1415 (1624)
                      |...++||+|+||+||.+...+|+.||||++....   .+.+.+|+++++++ +|||||++++++.+.+..++|||||. 
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-   92 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-   92 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence            34457899999999987766689999999986432   35678999999987 89999999999999999999999996 


Q ss_pred             CCHHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCC-------------CcEEE
Q 047591         1416 GSLEKWLYSHNYL------LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDD-------------MVAHL 1476 (1624)
Q Consensus      1416 gsL~~~l~~~~~~------l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~-------------~~~kl 1476 (1624)
                      |+|.+++......      ..+..+++|+.||+.||+|||+   .+|+||||||+|||++.+             +.+||
T Consensus        93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL  169 (434)
T 2rio_A           93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI  169 (434)
T ss_dssp             EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred             CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence            6999999865321      1223457899999999999996   799999999999999754             48999


Q ss_pred             eeecceeecCCCCCc---cccccccccccccccccCC-------CCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchh
Q 047591         1477 GDFGIAKLLDGVDSM---KQTMTLATIGYMAPEYGSE-------GIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVC 1545 (1624)
Q Consensus      1477 ~DFGla~~~~~~~~~---~~~~~~gt~~y~APE~~~~-------~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~ 1545 (1624)
                      +|||+|+........   ......||++|||||++.+       ..++.++|||||||++|||+| |+.||.+....+..
T Consensus       170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~  249 (434)
T 2rio_A          170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN  249 (434)
T ss_dssp             CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH
T ss_pred             cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH
Confidence            999999987543221   1234579999999998765       678999999999999999999 99999754322211


Q ss_pred             hhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1546 LKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1546 l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                         +.......       ... ...      ....++..+.+++.+|++.||++|||+.||++
T Consensus       250 ---i~~~~~~~-------~~~-~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          250 ---IIRGIFSL-------DEM-KCL------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             ---HHHTCCCC-------CCC-TTC------CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---HhcCCCCc-------ccc-ccc------ccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence               11110000       000 000      01234567889999999999999999999986


No 300
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=1.6e-34  Score=346.36  Aligned_cols=202  Identities=25%  Similarity=0.381  Sum_probs=178.4

Q ss_pred             HhhcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEE
Q 047591          740 QRLTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKA  816 (1624)
Q Consensus       740 ~~~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~  816 (1624)
                      +...++|...+.||+|+||+||+|+. .+|+.||||++....  ....+.+.+|++++++++||||+++++++.+.+..|
T Consensus        11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   90 (328)
T 3fe3_A           11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY   90 (328)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence            34567899999999999999999986 579999999997543  234567889999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCC
Q 047591          817 LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG  896 (1624)
Q Consensus       817 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~  896 (1624)
                      +||||+++|+|.+++...+ .+++.++..++.|+++||+|||+.   +|+||||||+|||++.++.+||+|||+|+....
T Consensus        91 lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  166 (328)
T 3fe3_A           91 LIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV  166 (328)
T ss_dssp             EEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred             EEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence            9999999999999997654 689999999999999999999984   599999999999999999999999999987654


Q ss_pred             CCCcccccccccccccCccccCCCCCC-cchhHHHHHHHHHHHHcCCCCCCc
Q 047591          897 EDSVTQTMTLATFGYMAPEYGSEGIVS-TCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       897 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ..  .....+||+.|+|||++.+..++ .++||||+||++|||+||+.||..
T Consensus       167 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  216 (328)
T 3fe3_A          167 GG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG  216 (328)
T ss_dssp             SC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence            32  23345799999999998776664 899999999999999999999965


No 301
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00  E-value=1.2e-33  Score=347.74  Aligned_cols=309  Identities=19%  Similarity=0.216  Sum_probs=178.4

Q ss_pred             cCCCcccEEEecCCCccccCCc-ccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCcc
Q 047591          110 ANLSFLVSLNISGNRFHGTLPN-ELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKL  188 (1624)
Q Consensus       110 ~~L~~L~~L~Ls~N~l~g~iP~-~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L  188 (1624)
                      ..+++|+.|++++|.++. +|. .+..+++|++|+|++|++++ +++..+..+++|++|+|++|++++..|..|+++++|
T Consensus        42 ~~l~~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L  119 (390)
T 3o6n_A           42 ITLNNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL  119 (390)
T ss_dssp             GGGCCCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred             cccCCceEEEecCCchhh-CChhHhcccccCcEEECCCCcccc-cChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCC
Confidence            346677777777777763 443 35666777777777777653 444445566666666666666666556666666666


Q ss_pred             cccccccccccccccC-cccccccccceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEeecc
Q 047591          189 KRLSVSFNELTGRIPQ-NIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLR  267 (1624)
Q Consensus       189 ~~L~Ls~N~l~g~ip~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls  267 (1624)
                      ++|+|++|+++ .+|. .|+++++|++|+|++|++++..|..+.++++|++|++++|++++ ++                
T Consensus       120 ~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~----------------  181 (390)
T 3o6n_A          120 TVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VD----------------  181 (390)
T ss_dssp             CEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB-CC----------------
T ss_pred             CEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc-cc----------------
Confidence            66666666666 3333 34666666666666666665555556666666666666666542 22                


Q ss_pred             cccccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEEe
Q 047591          268 DCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYL  347 (1624)
Q Consensus       268 ~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~L  347 (1624)
                                 ++.+++|+.|++++|.+..++             ...+|+.|++++|++++ +|...   .++|+.|+|
T Consensus       182 -----------~~~l~~L~~L~l~~n~l~~~~-------------~~~~L~~L~l~~n~l~~-~~~~~---~~~L~~L~l  233 (390)
T 3o6n_A          182 -----------LSLIPSLFHANVSYNLLSTLA-------------IPIAVEELDASHNSINV-VRGPV---NVELTILKL  233 (390)
T ss_dssp             -----------GGGCTTCSEEECCSSCCSEEE-------------CCSSCSEEECCSSCCCE-EECCC---CSSCCEEEC
T ss_pred             -----------cccccccceeecccccccccC-------------CCCcceEEECCCCeeee-ccccc---cccccEEEC
Confidence                       233344444444444333211             11244555555555542 23222   356777777


Q ss_pred             cCCccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEccccccccCCCCCCcccccccccccccceeeec
Q 047591          348 WGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQ  427 (1624)
Q Consensus       348 s~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~  427 (1624)
                      ++|++++.  ..+.++++|++|+|++|.+++.+|..|.++++|++|+|++|+++.                         
T Consensus       234 ~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------------  286 (390)
T 3o6n_A          234 QHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-------------------------  286 (390)
T ss_dssp             CSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-------------------------
T ss_pred             CCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-------------------------
Confidence            77777653  466777777777777777777766667666666666666665531                         


Q ss_pred             cCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccEEeccCCccCCCccchhccccccceecccccccccC
Q 047591          428 TNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGS  507 (1624)
Q Consensus       428 ~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~  507 (1624)
                                                      +|..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+++. 
T Consensus       287 --------------------------------~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~-  332 (390)
T 3o6n_A          287 --------------------------------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT-  332 (390)
T ss_dssp             --------------------------------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-
T ss_pred             --------------------------------cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccce-
Confidence                                            1222334555666666666665 355555666666666666666653 


Q ss_pred             CCccccCCCCCceeeccccccc
Q 047591          508 IPSELCQLESLNTLLLQGNALQ  529 (1624)
Q Consensus       508 iP~~l~~l~~L~~L~L~~N~l~  529 (1624)
                      +|  +..+++|+.|++++|.++
T Consensus       333 ~~--~~~~~~L~~L~l~~N~~~  352 (390)
T 3o6n_A          333 LK--LSTHHTLKNLTLSHNDWD  352 (390)
T ss_dssp             CC--CCTTCCCSEEECCSSCEE
T ss_pred             eC--chhhccCCEEEcCCCCcc
Confidence            22  444455555555555554


No 302
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=1.9e-34  Score=339.33  Aligned_cols=250  Identities=20%  Similarity=0.282  Sum_probs=200.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++....  ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            46778899999999999999886 68899999986432  2346789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCC---CcEEEeeecceeecCCC
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDD---MVAHLGDFGIAKLLDGV 1488 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~---~~~kl~DFGla~~~~~~ 1488 (1624)
                      |+++++|.+++...+ .+++.++..++.|++.||+|||+   .+|+||||||+||+++.+   +.+||+|||+++.....
T Consensus       102 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~  177 (287)
T 2wei_A          102 LYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (287)
T ss_dssp             CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred             ccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence            999999999887643 57899999999999999999996   799999999999999764   47999999999866433


Q ss_pred             CCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccC
Q 047591         1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1489 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                      .  ......||+.|+|||...+ .++.++|||||||++|||+||+.||......+ ..........            ..
T Consensus       178 ~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~------------~~  241 (287)
T 2wei_A          178 T--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGKY------------AF  241 (287)
T ss_dssp             S--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCC------------CC
T ss_pred             C--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCC------------CC
Confidence            2  2233468999999998765 48999999999999999999999987532211 1111111000            00


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ..     .....++..+.+++.+|++.+|++|||+.|+++.
T Consensus       242 ~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          242 DL-----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             CS-----GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             Cc-----hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence            00     0012234568899999999999999999999873


No 303
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=1.1e-34  Score=349.32  Aligned_cols=250  Identities=21%  Similarity=0.250  Sum_probs=170.6

Q ss_pred             CCCCc-CCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcCCCceeEEEeeecc----CCeeEE
Q 047591         1335 NGFSE-SNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN----PGFKAL 1408 (1624)
Q Consensus      1335 ~~f~~-~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~----~~~~~l 1408 (1624)
                      ++|.. .++||+|+||+||+|+.. +++.||||++.... ..   ..+....++.++||||+++++++..    ....++
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~---~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l  103 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-KA---RQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLI  103 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-HH---HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-HH---HHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence            45666 357999999999999886 68999999986432 11   1222334667799999999999865    445799


Q ss_pred             EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC---CCcEEEeeecceee
Q 047591         1409 ILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKL 1484 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~---~~~~kl~DFGla~~ 1484 (1624)
                      ||||+++|+|.+++...+ ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.   ++.+||+|||+++.
T Consensus       104 v~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~  180 (336)
T 3fhr_A          104 IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE  180 (336)
T ss_dssp             EEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence            999999999999998654 468999999999999999999997   79999999999999986   45699999999987


Q ss_pred             cCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhh
Q 047591         1485 LDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDA 1564 (1624)
Q Consensus      1485 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 1564 (1624)
                      ....   ......||+.|+|||++....++.++|||||||++|||+||+.||.......... .         ....+..
T Consensus       181 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~---------~~~~~~~  247 (336)
T 3fhr_A          181 TTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-G---------MKRRIRL  247 (336)
T ss_dssp             C-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------
T ss_pred             cccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-h---------HHHhhhc
Confidence            6432   2234578999999999988899999999999999999999999996532211100 0         0000000


Q ss_pred             hccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1565 NLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1565 ~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                      ......    ......++..+.+++.+|++.||++|||++|+++
T Consensus       248 ~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          248 GQYGFP----NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             ---CCC----TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cccccC----chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            000000    0001234566889999999999999999999987


No 304
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1e-34  Score=346.76  Aligned_cols=252  Identities=23%  Similarity=0.271  Sum_probs=180.0

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch--hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQ 1411 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~--~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~e 1411 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++....  ....+.+.++..+++.++||||+++++++.+++..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e  104 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME  104 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence            45677789999999999999885 68999999986432  2233445566667888999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCCc
Q 047591         1412 YMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491 (1624)
Q Consensus      1412 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~ 1491 (1624)
                      |+ ++.+..+.......+++..+..++.|+++||+|||+.  .+|+||||||+||+++.++.+||+|||+++......  
T Consensus       105 ~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--  179 (318)
T 2dyl_A          105 LM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK--  179 (318)
T ss_dssp             CC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             cc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc--
Confidence            99 4556555555456789999999999999999999961  389999999999999999999999999998664322  


Q ss_pred             cccccccccccccccccC-----CCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhc
Q 047591         1492 KQTMTLATIGYMAPEYGS-----EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANL 1566 (1624)
Q Consensus      1492 ~~~~~~gt~~y~APE~~~-----~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 1566 (1624)
                      ......||+.|+|||++.     ...++.++|||||||++|||+||+.||.........+........+          .
T Consensus       180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----------~  249 (318)
T 2dyl_A          180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPP----------L  249 (318)
T ss_dssp             -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCC----------C
T ss_pred             cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCC----------C
Confidence            223456999999999874     5678999999999999999999999997532221111111111000          0


Q ss_pred             cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1567 LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1567 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                      ...        ...++..+.+++.+||+.||++|||++|+++.
T Consensus       250 ~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          250 LPG--------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             CCS--------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             CCc--------cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            000        01234567889999999999999999999863


No 305
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00  E-value=1.2e-33  Score=367.39  Aligned_cols=242  Identities=18%  Similarity=0.174  Sum_probs=149.4

Q ss_pred             CCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCcccc
Q 047591          111 NLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKR  190 (1624)
Q Consensus       111 ~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~  190 (1624)
                      .+++++.|++++|.++...|..+..+++|++|+|++|.|++ +++..+..+++|++|+|++|.|++..|..|+++++|++
T Consensus        49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~  127 (597)
T 3oja_B           49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV  127 (597)
T ss_dssp             GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred             cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCC-CChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCE
Confidence            45677777777777764444445667777777777777764 44444566777777777777777666666677777777


Q ss_pred             cccccccccccccCcccccccccceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEeeccccc
Q 047591          191 LSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCM  270 (1624)
Q Consensus       191 L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~  270 (1624)
                      |+|++|.+++..|..|+++++|++|+|++|++++..|..++++++|++|+|++|.+++ +|   ++.+++|+.|++++|.
T Consensus       128 L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~---~~~l~~L~~L~l~~n~  203 (597)
T 3oja_B          128 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VD---LSLIPSLFHANVSYNL  203 (597)
T ss_dssp             EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB-CC---GGGCTTCSEEECCSSC
T ss_pred             EEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC-cC---hhhhhhhhhhhcccCc
Confidence            7777777764444445667777777777777776666666666666666666666653 22   1234455555555554


Q ss_pred             ccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCC
Q 047591          271 TTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGN  350 (1624)
Q Consensus       271 l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N  350 (1624)
                      +++     +...+                                +|+.|++++|.++. +|...   .++|+.|+|++|
T Consensus       204 l~~-----l~~~~--------------------------------~L~~L~ls~n~l~~-~~~~~---~~~L~~L~L~~n  242 (597)
T 3oja_B          204 LST-----LAIPI--------------------------------AVEELDASHNSINV-VRGPV---NVELTILKLQHN  242 (597)
T ss_dssp             CSE-----EECCT--------------------------------TCSEEECCSSCCCE-EECSC---CSCCCEEECCSS
T ss_pred             ccc-----ccCCc--------------------------------hhheeeccCCcccc-ccccc---CCCCCEEECCCC
Confidence            432     12222                                34444444444432 22221   245777777777


Q ss_pred             ccCCcCcccccCCCCCcEEecCCccccccCcccccccccccEEEcccccc
Q 047591          351 NLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQL  400 (1624)
Q Consensus       351 ~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l  400 (1624)
                      ++++  +..++.+++|+.|+|++|.+++.+|..|+++++|++|+|++|++
T Consensus       243 ~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l  290 (597)
T 3oja_B          243 NLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL  290 (597)
T ss_dssp             CCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCC
T ss_pred             CCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCC
Confidence            7775  35677777777777777777777776666666666666665554


No 306
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=1.4e-33  Score=342.17  Aligned_cols=265  Identities=19%  Similarity=0.261  Sum_probs=199.5

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CC-ceEEEEEeccchhhHHHHHHHHHHHHHhcCCCc------eeEEEeeeccCCee
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DG-TNAAIKIFSLQEDRALKSFDAECEVMRRIRHRN------LAKIVSSCSNPGFK 1406 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~-~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~HpN------Iv~l~g~~~~~~~~ 1406 (1624)
                      ++|...+.||+|+||+||+|+.. ++ +.||||+++.. ....+.+.+|++++++++|++      ++++++++...+..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            57888899999999999999875 34 68999998643 344577889999999998876      99999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEe-----------------
Q 047591         1407 ALILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL----------------- 1468 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl----------------- 1468 (1624)
                      ++||||+ +|++.+++.... ..+++.++..|+.||+.||+|||+   .+|+||||||+|||+                 
T Consensus        98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccccccccc
Confidence            9999999 667777776543 568999999999999999999996   799999999999999                 


Q ss_pred             --cCCCcEEEeeecceeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchh-
Q 047591         1469 --DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVC- 1545 (1624)
Q Consensus      1469 --d~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~- 1545 (1624)
                        +.++.+||+|||+|+.....    .....||+.|+|||++.+..++.++|||||||++|||+||+.||......+.. 
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  249 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV  249 (355)
T ss_dssp             EEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             cccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence              67889999999999875432    23457999999999998889999999999999999999999999754322110 


Q ss_pred             hhhhhhhcCChhHHHHHh-hh------c-cCC-chHHHHH------------HHHHhHHHHHHHHHHccccCCCCCCCHH
Q 047591         1546 LKHWVEESLPDAVTDVID-AN------L-LSG-EEEADIA------------AKKKCMSSVMSLALKCSEEIPEERMNVK 1604 (1624)
Q Consensus      1546 l~~~~~~~~~~~~~~~~d-~~------l-~~~-~~~~~~~------------~~~~~~~~~~~l~~~C~~~~P~~RPt~~ 1604 (1624)
                      .........|........ ..      . ... .......            ....+...+.+++.+||+.||++|||+.
T Consensus       250 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~  329 (355)
T 2eu9_A          250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLA  329 (355)
T ss_dssp             HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHH
Confidence            000011111211110000 00      0 000 0000000            0012245788999999999999999999


Q ss_pred             HHHH
Q 047591         1605 DALA 1608 (1624)
Q Consensus      1605 evl~ 1608 (1624)
                      |+++
T Consensus       330 e~l~  333 (355)
T 2eu9_A          330 EALL  333 (355)
T ss_dssp             HHTT
T ss_pred             HHhc
Confidence            9985


No 307
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=1.4e-34  Score=351.18  Aligned_cols=262  Identities=21%  Similarity=0.258  Sum_probs=194.6

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc--hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCe------
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGF------ 1405 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~--~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~------ 1405 (1624)
                      ++|...+.||+|+||.||+|+.. +|+.||||++...  .....+.+.+|+.++++++||||+++++++...+.      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            56777889999999999999875 6889999998643  33446789999999999999999999999977654      


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeec
Q 047591         1406 KALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL 1485 (1624)
Q Consensus      1406 ~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~ 1485 (1624)
                      .++||||++ |+|.+++..   .+++.++..++.||+.||+|||+   .+|+||||||+||++++++.+||+|||+++..
T Consensus       104 ~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  176 (353)
T 3coi_A          104 FYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHA  176 (353)
T ss_dssp             CEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred             EEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence            499999998 688877643   48899999999999999999996   79999999999999999999999999999865


Q ss_pred             CCCCCccccccccccccccccccCC-CCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhh--cCCh------
Q 047591         1486 DGVDSMKQTMTLATIGYMAPEYGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE--SLPD------ 1556 (1624)
Q Consensus      1486 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~--~~~~------ 1556 (1624)
                      ...    .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||......+ .+......  ..+.      
T Consensus       177 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~  251 (353)
T 3coi_A          177 DAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQKL  251 (353)
T ss_dssp             -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHTTC
T ss_pred             CCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHH
Confidence            422    234578999999998766 678999999999999999999999997542211 11111100  0000      


Q ss_pred             --h-HHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1557 --A-VTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1557 --~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                        . ....+. .+..............++..+.+++.+|++.||++|||++|+++.
T Consensus       252 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          252 NDKAAKSYIQ-SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             SCHHHHHHHH-TSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             hhHHHHHHHH-hCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence              0 001110 000000000000011345678899999999999999999999863


No 308
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=4.4e-34  Score=348.69  Aligned_cols=203  Identities=27%  Similarity=0.496  Sum_probs=176.0

Q ss_pred             cCCCCCcceeecCCccceEEEEec--------CCCEEEEEEeecccc-hhHHHHHHHHHHHHhc-CCCceeeeeeeeccC
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP--------YGMNVAIKVFNLQLD-GAIKSFDAECEVLRRV-RHRNLVKIISSCSNH  812 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~--------~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~  812 (1624)
                      .++|...+.||+|+||+||+|+..        ++..||||+++.... ...+.+.+|+++++++ +|||||+++++|.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            357888899999999999999752        356799999975533 3457899999999999 899999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee
Q 047591          813 GFKALILEYMPQGSLEKWLYSHK---------------YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL  877 (1624)
Q Consensus       813 ~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl  877 (1624)
                      +..|+||||+++|+|.+++....               ..+++.++..++.||++||+|||+.   +|+||||||+|||+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence            99999999999999999998653               2478999999999999999999984   59999999999999


Q ss_pred             CCCCceEEEeeeeeeccCCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          878 DDDTVAHLSDFGISKLLDGEDSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       878 d~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      +.++.+||+|||+|+........ ......+|+.|+|||++....++.++|||||||++|||+| |+.||...
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~  309 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI  309 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence            99999999999999976543322 2233467899999999988889999999999999999999 99998753


No 309
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=8.7e-35  Score=361.57  Aligned_cols=249  Identities=20%  Similarity=0.282  Sum_probs=185.6

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccchhhHHHHHHHHHHHHHhc-CCCceeEEEeeeccCCeeEEEEEe
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQY 1412 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l-~HpNIv~l~g~~~~~~~~~lV~ey 1412 (1624)
                      ..+|...++||+|+||+||.....+++.||||++.....   ..+.+|+++++++ +|||||++++++.+.+..++||||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            345777889999999986655556789999999864322   2356899999999 799999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC-----CCcEEEeeecceeecCC
Q 047591         1413 MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD-----DMVAHLGDFGIAKLLDG 1487 (1624)
Q Consensus      1413 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~-----~~~~kl~DFGla~~~~~ 1487 (1624)
                      |+ |+|.+++........+.++..++.||++||+|||+   .+|+||||||+|||++.     ...+||+|||+|+....
T Consensus       100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~  175 (432)
T 3p23_A          100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV  175 (432)
T ss_dssp             CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred             CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence            97 69999998766555555677899999999999996   79999999999999943     34689999999987653


Q ss_pred             CCC--ccccccccccccccccccC---CCCcCcccchHHHHHHHHHHHc-CCCCCCCCCccchhhhhhhhhcCChhHHHH
Q 047591         1488 VDS--MKQTMTLATIGYMAPEYGS---EGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDV 1561 (1624)
Q Consensus      1488 ~~~--~~~~~~~gt~~y~APE~~~---~~~~~~k~DV~SfGvil~Ellt-g~~P~~~~~~~~~~l~~~~~~~~~~~~~~~ 1561 (1624)
                      ...  .......||++|||||++.   ...++.++|||||||++|||+| |+.||.........  ........      
T Consensus       176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~--~~~~~~~~------  247 (432)
T 3p23_A          176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN--ILLGACSL------  247 (432)
T ss_dssp             ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH--HHTTCCCC------
T ss_pred             CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH--HHhccCCc------
Confidence            321  2233467999999999987   4667889999999999999999 88898543221110  00000000      


Q ss_pred             HhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047591         1562 IDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALA 1608 (1624)
Q Consensus      1562 ~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~ 1608 (1624)
                         ......        ......+.+++.+||+.||++|||+.||++
T Consensus       248 ---~~~~~~--------~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          248 ---DCLHPE--------KHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             ---TTSCTT--------CHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---cccCcc--------ccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence               000000        112344678999999999999999999985


No 310
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=7.6e-34  Score=337.56  Aligned_cols=215  Identities=32%  Similarity=0.515  Sum_probs=187.2

Q ss_pred             hccccCHHHHHhhcCCCCCc------ceeecCCccceEEEEecCCCEEEEEEeeccc----chhHHHHHHHHHHHHhcCC
Q 047591          730 TWRRISYQELQRLTDGFSES------NLIGAGSFGSVYKATLPYGMNVAIKVFNLQL----DGAIKSFDAECEVLRRVRH  799 (1624)
Q Consensus       730 ~~~~~~~~el~~~t~~f~~~------~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~H  799 (1624)
                      ....|+++++.++|++|...      +.||+|+||+||+|.. +++.||||++....    ....+.|.+|+.++++++|
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            34679999999999999988      8999999999999987 58899999986432    2345679999999999999


Q ss_pred             CceeeeeeeeccCCeEEEEEEecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee
Q 047591          800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL  877 (1624)
Q Consensus       800 ~niv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl  877 (1624)
                      |||+++++++.+.+..++||||+++|+|.+++...  ...+++..+..++.|++.||+|||+.   +|+||||||+||++
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili  166 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL  166 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence            99999999999999999999999999999999743  23589999999999999999999984   59999999999999


Q ss_pred             CCCCceEEEeeeeeeccCCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCccC
Q 047591          878 DDDTVAHLSDFGISKLLDGEDSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMF  949 (1624)
Q Consensus       878 d~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~~  949 (1624)
                      ++++.+||+|||+++........ ......||+.|+|||...+ .++.++|||||||++|||+||+.||....
T Consensus       167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~  238 (307)
T 2nru_A          167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR  238 (307)
T ss_dssp             CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred             cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence            99999999999999876543222 2233469999999998764 58999999999999999999999997643


No 311
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.9e-34  Score=348.93  Aligned_cols=200  Identities=26%  Similarity=0.361  Sum_probs=172.5

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCeEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l  817 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||++....   ....+.+.+|..+++++ +|||||++++++.+.+..|+
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            468999999999999999999864 68999999997542   23456788999999998 69999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      |||||++|+|.+++.... .+++.++..|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+.....
T Consensus       102 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~  177 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN  177 (353)
T ss_dssp             EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred             EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence            999999999999997654 689999999999999999999994   5999999999999999999999999999864432


Q ss_pred             CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       898 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .. .....+||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       178 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~  226 (353)
T 3txo_A          178 GV-TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA  226 (353)
T ss_dssp             ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             Cc-cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC
Confidence            22 23345799999999999888899999999999999999999999965


No 312
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=3.4e-34  Score=338.51  Aligned_cols=202  Identities=25%  Similarity=0.478  Sum_probs=172.5

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      .++|+..+.||+|+||+||+|+. .+++.||||++....   ....+.|.+|+.++++++||||+++++++.+++..|+|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            46788899999999999999985 468999999986432   23456899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++|+|.+++.... .+++.++..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++......
T Consensus        90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  165 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS  165 (294)
T ss_dssp             EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred             EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence            99999999999997654 689999999999999999999984   59999999999999999999999999998765443


Q ss_pred             CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ........||+.|+|||.+....++.++|||||||++|||+||+.||...
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~  215 (294)
T 4eqm_A          166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE  215 (294)
T ss_dssp             ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred             ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            33334457999999999998888999999999999999999999999653


No 313
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=3.2e-34  Score=349.65  Aligned_cols=201  Identities=18%  Similarity=0.173  Sum_probs=173.8

Q ss_pred             hhcCCCCCcceeecCCccceEEEE------ecCCCEEEEEEeecccchhHHHHHHHHHHHHhcC---CCceeeeeeeecc
Q 047591          741 RLTDGFSESNLIGAGSFGSVYKAT------LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVR---HRNLVKIISSCSN  811 (1624)
Q Consensus       741 ~~t~~f~~~~~iG~G~~G~Vy~~~------~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~  811 (1624)
                      ...++|...+.||+|+||+||+|.      ..+++.||||++...   ...++.+|++++++++   |+||+++++++..
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            345778889999999999999994      456899999998744   3456888899988887   9999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCC--------
Q 047591          812 HGFKALILEYMPQGSLEKWLYS----HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD--------  879 (1624)
Q Consensus       812 ~~~~~lV~Ey~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~--------  879 (1624)
                      .+..|+|||||++|+|.+++..    ....+++.++..|+.|+++||+|||+.   +||||||||+|||++.        
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~  215 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE  215 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence            9999999999999999999975    234699999999999999999999984   5999999999999998        


Q ss_pred             ---CCceEEEeeeeeeccCCC-CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          880 ---DTVAHLSDFGISKLLDGE-DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       880 ---~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                         ++.+||+|||+|+..... ........+||++|||||++.+..++.++|||||||++|||+||+.||..
T Consensus       216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  287 (365)
T 3e7e_A          216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK  287 (365)
T ss_dssp             ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred             ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence               899999999999865421 22233445799999999999988899999999999999999999999854


No 314
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=4e-34  Score=350.14  Aligned_cols=200  Identities=27%  Similarity=0.346  Sum_probs=174.7

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCeEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l  817 (1624)
                      .++|...++||+|+||+||+|+.. +++.||||+++...   ....+.+.+|..+++++ +|||||++++++.+.+..|+
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            356888999999999999999865 58899999997543   22345688999999887 89999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      ||||+++|+|.+++.... .+++..+..|+.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+|+.....
T Consensus       131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~  206 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP  206 (396)
T ss_dssp             EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence            999999999999997654 689999999999999999999984   5999999999999999999999999999864332


Q ss_pred             CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       898 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .. .....+||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus       207 ~~-~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~  255 (396)
T 4dc2_A          207 GD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  255 (396)
T ss_dssp             TC-CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred             CC-ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence            22 23345799999999999999999999999999999999999999964


No 315
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3.2e-34  Score=334.04  Aligned_cols=200  Identities=29%  Similarity=0.455  Sum_probs=178.2

Q ss_pred             CCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEecC
Q 047591          744 DGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMP  823 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~  823 (1624)
                      ++|...+.||+|+||+||+|...+++.||||++..... ..+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            46778899999999999999988899999999975433 34679999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCcccc
Q 047591          824 QGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT  903 (1624)
Q Consensus       824 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~  903 (1624)
                      +|+|.+++......+++..+..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++...........
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  165 (269)
T 4hcu_A           89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  165 (269)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence            9999999987776799999999999999999999984   5999999999999999999999999999876543333333


Q ss_pred             cccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCc
Q 047591          904 MTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDE  947 (1624)
Q Consensus       904 ~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~  947 (1624)
                      ...+|+.|+|||++....++.++||||+|+++|||+| |+.||..
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~  210 (269)
T 4hcu_A          166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN  210 (269)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC
Confidence            4467889999999988889999999999999999999 9999865


No 316
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=2.1e-34  Score=352.31  Aligned_cols=266  Identities=20%  Similarity=0.262  Sum_probs=197.1

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHHHhcC-----------CCceeEEEeeecc
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRIR-----------HRNLAKIVSSCSN 1402 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l~~l~-----------HpNIv~l~g~~~~ 1402 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++... ....+.+.+|++++++++           ||||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            56778899999999999999874 6889999998643 334567889999999887           8999999999875


Q ss_pred             CC----eeEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCCC-ceEEcCCCCCcEEec------C
Q 047591         1403 PG----FKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYST-SIIHCDLKPSNVLLD------D 1470 (1624)
Q Consensus      1403 ~~----~~~lV~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~-~iiHrDlK~~NILld------~ 1470 (1624)
                      .+    ..++||||+ +++|.+++... ...+++..+..|+.||+.||+|||+   . +|+||||||+|||++      .
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~  173 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPEN  173 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTT
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcC
Confidence            43    789999999 89999999864 3458999999999999999999997   5 899999999999994      4


Q ss_pred             CCcEEEeeecceeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCcc-----chh
Q 047591         1471 DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTG-----EVC 1545 (1624)
Q Consensus      1471 ~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~-----~~~ 1545 (1624)
                      .+.+||+|||+|+.....    .....||+.|+|||++.+..++.++|||||||++|||+||+.||......     ...
T Consensus       174 ~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  249 (373)
T 1q8y_A          174 LIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH  249 (373)
T ss_dssp             EEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred             cceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence            458999999999876432    23357999999999998888999999999999999999999999753211     011


Q ss_pred             hhhhhh--hcCChhHHH-------HHhh-hccCC-------chHHH----HHHHHHhHHHHHHHHHHccccCCCCCCCHH
Q 047591         1546 LKHWVE--ESLPDAVTD-------VIDA-NLLSG-------EEEAD----IAAKKKCMSSVMSLALKCSEEIPEERMNVK 1604 (1624)
Q Consensus      1546 l~~~~~--~~~~~~~~~-------~~d~-~l~~~-------~~~~~----~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~ 1604 (1624)
                      +.....  ...|.....       .++. .....       .....    ......++..+.+++.+||+.||++|||++
T Consensus       250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  329 (373)
T 1q8y_A          250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG  329 (373)
T ss_dssp             HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred             HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence            111110  011111000       0000 00000       00000    001134567888999999999999999999


Q ss_pred             HHHHH
Q 047591         1605 DALAN 1609 (1624)
Q Consensus      1605 evl~~ 1609 (1624)
                      |+++.
T Consensus       330 ell~h  334 (373)
T 1q8y_A          330 GLVNH  334 (373)
T ss_dssp             HHHTC
T ss_pred             HHhhC
Confidence            99863


No 317
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=6.7e-34  Score=342.84  Aligned_cols=202  Identities=25%  Similarity=0.357  Sum_probs=176.7

Q ss_pred             hhcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCeE
Q 047591          741 RLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGFK  815 (1624)
Q Consensus       741 ~~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~  815 (1624)
                      ...++|...+.||+|+||+||+|+.. +|+.||||+++...   ....+.+.+|..+++++ +||||+++++++.+.+..
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            34578999999999999999999875 68999999997542   23456788999999987 999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccC
Q 047591          816 ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD  895 (1624)
Q Consensus       816 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~  895 (1624)
                      |+||||+++|+|.+++.... .+++.++..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+...
T Consensus        94 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~  169 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENM  169 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence            99999999999999997643 689999999999999999999994   59999999999999999999999999998654


Q ss_pred             CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          896 GEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       896 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .... .....+||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus       170 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  220 (345)
T 1xjd_A          170 LGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG  220 (345)
T ss_dssp             CTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC
Confidence            3222 23345799999999999888899999999999999999999999864


No 318
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=8.5e-34  Score=338.45  Aligned_cols=196  Identities=28%  Similarity=0.375  Sum_probs=175.5

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..|+||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            56888899999999999999864 68999999997542   234567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....  
T Consensus        86 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--  159 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--  159 (318)
T ss_dssp             CCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred             eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc--
Confidence            9999999999998654 689999999999999999999984   5999999999999999999999999999876432  


Q ss_pred             cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                        ....+||+.|+|||++....++.++|||||||++|||++|+.||..
T Consensus       160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  205 (318)
T 1fot_A          160 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD  205 (318)
T ss_dssp             --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             --cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence              2235799999999999988999999999999999999999999864


No 319
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.5e-34  Score=340.43  Aligned_cols=243  Identities=21%  Similarity=0.300  Sum_probs=190.1

Q ss_pred             HHhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchh------hHHHHHHHHHHHHHhc----CCCceeEEEeee
Q 047591         1332 LATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQED------RALKSFDAECEVMRRI----RHRNLAKIVSSC 1400 (1624)
Q Consensus      1332 ~at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~------~~~~~f~~E~~~l~~l----~HpNIv~l~g~~ 1400 (1624)
                      ...++|...+.||+|+||.||+|+.. +++.||||++.....      .....+.+|+++++++    +||||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            34567888999999999999999874 688999999864322      1234567899999999    899999999999


Q ss_pred             ccCCeeEEEEEe-cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEec-CCCcEEEee
Q 047591         1401 SNPGFKALILQY-MPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLD-DDMVAHLGD 1478 (1624)
Q Consensus      1401 ~~~~~~~lV~ey-~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld-~~~~~kl~D 1478 (1624)
                      ...+..++|||| +++++|.+++.+.+ .+++..+..++.||+.||+|||+   .+|+||||||+||+++ +++.+||+|
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~d  183 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKLID  183 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEEECC
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEEEEE
Confidence            999999999999 89999999998643 58999999999999999999997   6999999999999999 889999999


Q ss_pred             ecceeecCCCCCccccccccccccccccccCCCCc-CcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChh
Q 047591         1479 FGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDA 1557 (1624)
Q Consensus      1479 FGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~ 1557 (1624)
                      ||+++......   .....||+.|+|||+..+..+ +.++|||||||++|||+||+.||....       .         
T Consensus       184 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~---------  244 (312)
T 2iwi_A          184 FGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------E---------  244 (312)
T ss_dssp             CSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------H---------
T ss_pred             cchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------H---------
Confidence            99998775432   234569999999998876665 458999999999999999999986421       0         


Q ss_pred             HHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1558 VTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1558 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                         ..+..... .        ..++..+.+++.+||+.+|++|||++|+++.
T Consensus       245 ---~~~~~~~~-~--------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          245 ---ILEAELHF-P--------AHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             ---HHHTCCCC-C--------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ---HhhhccCC-c--------ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               01100000 0        1233457789999999999999999999873


No 320
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=2.5e-34  Score=343.98  Aligned_cols=242  Identities=22%  Similarity=0.270  Sum_probs=197.2

Q ss_pred             HhCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccchh------hHHHHHHHHHHHHHhcC--CCceeEEEeeeccC
Q 047591         1333 ATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQED------RALKSFDAECEVMRRIR--HRNLAKIVSSCSNP 1403 (1624)
Q Consensus      1333 at~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~------~~~~~f~~E~~~l~~l~--HpNIv~l~g~~~~~ 1403 (1624)
                      ..++|...+.||+|+||+||+|+.. +++.||||++.....      ...+.+.+|++++++++  ||||+++++++.++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            3467888899999999999999864 688999999864421      12356778999999996  59999999999999


Q ss_pred             CeeEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEec-CCCcEEEeeecc
Q 047591         1404 GFKALILQYMPQ-GSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLD-DDMVAHLGDFGI 1481 (1624)
Q Consensus      1404 ~~~~lV~ey~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld-~~~~~kl~DFGl 1481 (1624)
                      +..++||||+.+ ++|.+++.+. ..+++..+..++.|++.||+|||+   .+|+||||||+|||++ +++.+||+|||+
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~  196 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGS  196 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred             CcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence            999999999986 8999999764 357899999999999999999996   7999999999999999 789999999999


Q ss_pred             eeecCCCCCccccccccccccccccccCCCCc-CcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHH
Q 047591         1482 AKLLDGVDSMKQTMTLATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTD 1560 (1624)
Q Consensus      1482 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~ 1560 (1624)
                      ++.....   ......||+.|+|||++....+ +.++|||||||++|||+||+.||....       ..           
T Consensus       197 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~-----------  255 (320)
T 3a99_A          197 GALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EI-----------  255 (320)
T ss_dssp             CEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HH-----------
T ss_pred             ccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hh-----------
Confidence            9877532   2234569999999998876655 788999999999999999999986421       00           


Q ss_pred             HHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1561 VIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1561 ~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                       .......         ...++..+.+++.+||+.+|++|||++|+++.
T Consensus       256 -~~~~~~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          256 -IRGQVFF---------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             -HHCCCCC---------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -hcccccc---------cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             0000000         01234567889999999999999999999873


No 321
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=6.5e-34  Score=341.05  Aligned_cols=202  Identities=28%  Similarity=0.463  Sum_probs=173.8

Q ss_pred             CCCCCcceeecCCccceEEEEec----CCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP----YGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      ++|...+.||+|+||+||+|...    .+..||||++.... ....+.|.+|++++++++||||+++++++.+.+..++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            45777899999999999999874    34569999997543 33456799999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++|+|.++++.....+++.++..|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  205 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP  205 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred             eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence            999999999999987766899999999999999999999994   59999999999999999999999999999875432


Q ss_pred             Cc--ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          899 SV--TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       899 ~~--~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ..  ......+|+.|+|||++....++.++|||||||++|||+| |+.||...
T Consensus       206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~  258 (325)
T 3kul_A          206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM  258 (325)
T ss_dssp             -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred             cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC
Confidence            22  1223356889999999988889999999999999999999 99998653


No 322
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.8e-34  Score=339.63  Aligned_cols=200  Identities=22%  Similarity=0.354  Sum_probs=178.5

Q ss_pred             hcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      ..++|...+.||+|+||+||+|... +|+.||+|++.... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            4578889999999999999999865 68899999987543 344678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCC--CCceEEEeeeeeeccCCCC
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD--DTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~--~~~~kl~DFGla~~~~~~~  898 (1624)
                      |+++|+|.+++......+++.++..++.|+++||+|||+.   +|+||||||+|||++.  ++.+||+|||+++......
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~  158 (321)
T 1tki_A           82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred             eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence            9999999999987666799999999999999999999984   5999999999999997  7899999999999875443


Q ss_pred             CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .  .....||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       159 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  205 (321)
T 1tki_A          159 N--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA  205 (321)
T ss_dssp             E--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             c--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC
Confidence            2  2345799999999999888899999999999999999999999865


No 323
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.2e-33  Score=336.65  Aligned_cols=205  Identities=27%  Similarity=0.387  Sum_probs=176.9

Q ss_pred             HhhcCCCCCcceeecCCccceEEEEecCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEE
Q 047591          740 QRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       740 ~~~t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      +...++|+..+.||+|+||+||+|+..+|+.||||++....  ....+.+.+|++++++++|||||++++++.+++..++
T Consensus        17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   96 (311)
T 3niz_A           17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL   96 (311)
T ss_dssp             ECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred             cchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence            34567899999999999999999998889999999986543  2234678999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      ||||++ |+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+.....
T Consensus        97 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  172 (311)
T 3niz_A           97 VFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP  172 (311)
T ss_dssp             EEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred             EEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence            999998 589999987776799999999999999999999984   5999999999999999999999999999876533


Q ss_pred             CCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCccC
Q 047591          898 DSVTQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDEMF  949 (1624)
Q Consensus       898 ~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~~~  949 (1624)
                      .. ......||+.|+|||++.+ ..++.++||||+||++|||+||+.||....
T Consensus       173 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  224 (311)
T 3niz_A          173 VR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT  224 (311)
T ss_dssp             CC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC
Confidence            22 2233468999999998765 568999999999999999999999997543


No 324
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=1e-33  Score=341.76  Aligned_cols=199  Identities=28%  Similarity=0.351  Sum_probs=175.4

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCeEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++....   ....+.+.+|..+++++ +|||||++++++.+.+..|+|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            46888899999999999999875 68999999997543   23456788999999988 899999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+......
T Consensus        89 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~  164 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  164 (345)
T ss_dssp             ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred             EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence            99999999999997654 689999999999999999999984   59999999999999999999999999998643322


Q ss_pred             CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      . .....+||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       165 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          165 D-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             C-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             C-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence            2 23345799999999999888899999999999999999999999964


No 325
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00  E-value=1.5e-33  Score=366.40  Aligned_cols=336  Identities=22%  Similarity=0.237  Sum_probs=187.8

Q ss_pred             cccccceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEeecccccccCcCCccccccCcCCee
Q 047591          209 LTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYL  288 (1624)
Q Consensus       209 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L  288 (1624)
                      +++++.|++++|.++.                         +|..++..+++|++|+|++|.+++..|..|+.+++|++|
T Consensus        50 l~~l~~l~l~~~~l~~-------------------------lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L  104 (597)
T 3oja_B           50 LNNQKIVTFKNSTMRK-------------------------LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKL  104 (597)
T ss_dssp             GCCCSEEEESSCEESE-------------------------ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred             CCCceEEEeeCCCCCC-------------------------cCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEE
Confidence            4566777777777663                         333334444445555555555554445555555555555


Q ss_pred             eccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcE
Q 047591          289 GLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTV  368 (1624)
Q Consensus       289 ~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~  368 (1624)
                      +|++|.+.        +..|..+.++++|++|+|++|.|+ .+|..++.++++|++|+|++|++++.+|..|+++++|++
T Consensus       105 ~L~~n~l~--------~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~  175 (597)
T 3oja_B          105 YMGFNAIR--------YLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQN  175 (597)
T ss_dssp             ECCSSCCC--------CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCE
T ss_pred             ECCCCcCC--------CCCHHHHcCCCCCCEEEeeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcE
Confidence            55544332        223333444455555555555555 345444446677777777777777766667777777777


Q ss_pred             EecCCccccccCcccccccccccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchh
Q 047591          369 LELSRNLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEY  448 (1624)
Q Consensus       369 L~Ls~N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~  448 (1624)
                      |+|++|.+++..   ++.+++|+.|++++|.+..            +.....                            
T Consensus       176 L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~------------l~~~~~----------------------------  212 (597)
T 3oja_B          176 LQLSSNRLTHVD---LSLIPSLFHANVSYNLLST------------LAIPIA----------------------------  212 (597)
T ss_dssp             EECTTSCCSBCC---GGGCTTCSEEECCSSCCSE------------EECCTT----------------------------
T ss_pred             EECcCCCCCCcC---hhhhhhhhhhhcccCcccc------------ccCCch----------------------------
Confidence            777777777653   4455666666666665532            111122                            


Q ss_pred             hccCCcccCCCCCCCcCCCCcccEEeccCCccCCCccchhccccccceecccccccccCCCccccCCCCCceeecccccc
Q 047591          449 FYAGSCELGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNAL  528 (1624)
Q Consensus       449 L~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l  528 (1624)
                                           |+.|++++|.++. +|..+  ..+|+.|+|++|++++  +..++.+++|+.|+|++|++
T Consensus       213 ---------------------L~~L~ls~n~l~~-~~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l  266 (597)
T 3oja_B          213 ---------------------VEELDASHNSINV-VRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNEL  266 (597)
T ss_dssp             ---------------------CSEEECCSSCCCE-EECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCC
T ss_pred             ---------------------hheeeccCCcccc-ccccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCcc
Confidence                                 3333333333332 11111  1344445555555443  23444555555555555555


Q ss_pred             cCCCccccccccCCccccccCccccccCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCccccc
Q 047591          529 QNQIPTCLANLTSLRALNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSI  608 (1624)
Q Consensus       529 ~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~  608 (1624)
                      ++.+|..|+++++|+.|+|++|++++ +|..+..+++|+.|||++|.++ .+|..++.+++|+.|+|++|++++ +|  +
T Consensus       267 ~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~-~~--~  341 (597)
T 3oja_B          267 EKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT-LK--L  341 (597)
T ss_dssp             CEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-CC--C
T ss_pred             CCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCC-cC--h
Confidence            55555555555555555555555544 3444455555666666666665 367777777777777777777774 33  5


Q ss_pred             cCCccccccccccCCCCCCCchhhhccccccCCCCCCCCCccccCCcccccccccccccc
Q 047591          609 GGLKDLTYLALARNGFQGSIPEAIGSLISLEKGEIPSGGPFVNFTEGSFMQNYALCGSLR  668 (1624)
Q Consensus       609 ~~l~~L~~L~ls~N~l~g~iP~~~~~l~~L~~~~i~~~~~~~~~~~~~~~~n~~lcg~~~  668 (1624)
                      +.+++|+.|++++|++++..+..+                |..+....+.++...|+...
T Consensus       342 ~~~~~L~~L~l~~N~~~~~~~~~~----------------~~~~~~~~~~~~~~~C~~~~  385 (597)
T 3oja_B          342 STHHTLKNLTLSHNDWDCNSLRAL----------------FRNVARPAVDDADQHCKIDY  385 (597)
T ss_dssp             CTTCCCSEEECCSSCEEHHHHHHH----------------TTTCCTTTBCCCCCCCCTTC
T ss_pred             hhcCCCCEEEeeCCCCCChhHHHH----------------HHHHhhhccccccccCCcch
Confidence            667778888888888876433321                33444556677888898743


No 326
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1.5e-33  Score=342.05  Aligned_cols=200  Identities=24%  Similarity=0.367  Sum_probs=177.1

Q ss_pred             hcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccch------hHHHHHHHHHHHHhcCCCceeeeeeeeccCCe
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDG------AIKSFDAECEVLRRVRHRNLVKIISSCSNHGF  814 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~  814 (1624)
                      ..+.|...+.||+|+||+||+|+.. +|+.||||++......      ..+.+.+|+.++++++|||||++++++.+...
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            4577889999999999999999865 6899999999754321      24678999999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCC----ceEEEeeee
Q 047591          815 KALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT----VAHLSDFGI  890 (1624)
Q Consensus       815 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~----~~kl~DFGl  890 (1624)
                      .|+||||+++|+|.+++... ..+++.++..++.||+.||+|||+.   +|+||||||+|||++.++    .+||+|||+
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~  165 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred             EEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence            99999999999999999754 4789999999999999999999984   599999999999998877    799999999


Q ss_pred             eeccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          891 SKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       891 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ++.......  ....+||+.|+|||++....++.++|||||||++|||++|+.||..
T Consensus       166 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~  220 (361)
T 2yab_A          166 AHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  220 (361)
T ss_dssp             CEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             ceEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence            988754322  2335799999999999888899999999999999999999999864


No 327
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=2.3e-33  Score=342.32  Aligned_cols=198  Identities=27%  Similarity=0.372  Sum_probs=174.7

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++....   ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            56888899999999999999864 68999999987542   234567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||+++|+|.+++... ..+++..+..|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+...... 
T Consensus        95 e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-  169 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET-  169 (384)
T ss_dssp             CCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred             ecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCC-
Confidence            999999999999764 3689999999999999999999984   59999999999999999999999999999765432 


Q ss_pred             cccccccccccccCccccCC---CCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSE---GIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~---~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                       .....+||+.|+|||++..   ..++.++|||||||++|||+||+.||..
T Consensus       170 -~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~  219 (384)
T 4fr4_A          170 -QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI  219 (384)
T ss_dssp             -CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCC
Confidence             2334579999999998763   4589999999999999999999999964


No 328
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=3e-34  Score=351.29  Aligned_cols=203  Identities=28%  Similarity=0.445  Sum_probs=176.3

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      .++|...+.||+|+||+||+|++. +++.||||++..... ...+.|.+|+++|++++|||||+++++|.+++..++|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            356777899999999999999975 789999999875432 234578899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCc
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV  900 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~  900 (1624)
                      |+++|+|.++++..+..+++.++..++.|+++||+|||+.   +|+||||||+|||+++++.+||+|||+|+........
T Consensus       193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~  269 (377)
T 3cbl_A          193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA  269 (377)
T ss_dssp             CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence            9999999999987766799999999999999999999994   5999999999999999999999999999875432211


Q ss_pred             c-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          901 T-QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       901 ~-~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      . .....+|+.|+|||.+..+.++.++|||||||++|||+| |+.||...
T Consensus       270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~  319 (377)
T 3cbl_A          270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL  319 (377)
T ss_dssp             CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred             ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            1 112346788999999988889999999999999999999 99998754


No 329
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=6.2e-34  Score=338.67  Aligned_cols=209  Identities=30%  Similarity=0.484  Sum_probs=170.5

Q ss_pred             HHHHhhcCCCCCcceeecCCccceEEEEecCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCe
Q 047591          737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGF  814 (1624)
Q Consensus       737 ~el~~~t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~  814 (1624)
                      .+.....++|+..+.||+|+||+||+|+. +|+.||||++....  ....+.|.+|++++++++||||+++++++.+.+.
T Consensus        30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 3p86_A           30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN  108 (309)
T ss_dssp             --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred             ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence            33334456788899999999999999987 58899999987543  2345679999999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeee
Q 047591          815 KALILEYMPQGSLEKWLYSHKY--TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK  892 (1624)
Q Consensus       815 ~~lV~Ey~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~  892 (1624)
                      .++||||+++|+|.+++.....  .+++..+..++.|+++||+|||+.+ .+|+||||||+||+++.++.+||+|||+++
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  187 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSR  187 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred             eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence            9999999999999999976542  3899999999999999999999854 349999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          893 LLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       893 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ....... ......||+.|+|||++....++.++|||||||++|||+||+.||...
T Consensus       188 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~  242 (309)
T 3p86_A          188 LKASTFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL  242 (309)
T ss_dssp             ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred             ccccccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            6543321 223357999999999999888999999999999999999999999753


No 330
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=6.8e-34  Score=347.28  Aligned_cols=202  Identities=25%  Similarity=0.473  Sum_probs=165.3

Q ss_pred             CCCCCcceeecCCccceEEEEec----CCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP----YGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      ++|...+.||+|+||+||+|+..    ++..||||+++... ....+.|.+|+.++++++|||||+++++|.+.+..++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            57888999999999999999864    57789999997543 33456899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++|+|.++++.....+++.++..|+.|+++||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  201 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP  201 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence            999999999999987776799999999999999999999984   59999999999999999999999999998775432


Q ss_pred             Ccc--cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          899 SVT--QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       899 ~~~--~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ...  .....+|+.|+|||++....++.++|||||||++|||++ |+.||...
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~  254 (373)
T 2qol_A          202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM  254 (373)
T ss_dssp             ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC
T ss_pred             ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence            221  112246788999999988889999999999999999998 99998653


No 331
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.1e-33  Score=342.02  Aligned_cols=200  Identities=23%  Similarity=0.292  Sum_probs=176.2

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCeEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l  817 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||++....   ....+.+.+|..++.++ +||||+++++++.+.+..|+
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            467899999999999999999875 47899999997542   23456788999999988 89999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      ||||+++|+|.+++...+ .+++.++..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+.....
T Consensus        99 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  174 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD  174 (353)
T ss_dssp             EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence            999999999999997654 689999999999999999999984   5999999999999999999999999999864332


Q ss_pred             CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       898 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .. .....+||+.|+|||++....++.++|||||||++|||++|+.||..
T Consensus       175 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~  223 (353)
T 2i0e_A          175 GV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG  223 (353)
T ss_dssp             TC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             Cc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence            22 23345799999999999888999999999999999999999999864


No 332
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.2e-33  Score=329.03  Aligned_cols=201  Identities=30%  Similarity=0.424  Sum_probs=179.5

Q ss_pred             cCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEec
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYM  822 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~  822 (1624)
                      .++|...+.||+|+||+||+|+..++..||||++..... ..+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            356888899999999999999988888999999975433 3467899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCccc
Q 047591          823 PQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQ  902 (1624)
Q Consensus       823 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~  902 (1624)
                      ++|+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++..........
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  162 (268)
T 3sxs_A           86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS  162 (268)
T ss_dssp             TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred             CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence            99999999987766799999999999999999999994   599999999999999999999999999987765544333


Q ss_pred             ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCc
Q 047591          903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDE  947 (1624)
Q Consensus       903 ~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~  947 (1624)
                      ....+|+.|+|||......++.++||||||+++|||+| |+.||..
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  208 (268)
T 3sxs_A          163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL  208 (268)
T ss_dssp             CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccc
Confidence            44457788999999888889999999999999999999 9999865


No 333
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=4.8e-34  Score=341.85  Aligned_cols=201  Identities=27%  Similarity=0.367  Sum_probs=170.7

Q ss_pred             CCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCC----eEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHG----FKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lV~  819 (1624)
                      ++|+..+.||+|+||+||+|+.. ++.||||++..... ....+.+|+.++++++|||||++++++....    ..++||
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~  101 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT  101 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence            56888899999999999999875 89999999975432 3345677999999999999999999998643    479999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcC-------CCCCeEeCcCCCCCeeeCCCCceEEEeeeeee
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG-------HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK  892 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------~~~~IiHrDlKp~NILld~~~~~kl~DFGla~  892 (1624)
                      ||+++|+|.++++..  .+++.++..|+.|+++||+|||+.       +.++|+||||||+|||++.++.+||+|||+|+
T Consensus       102 e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~  179 (322)
T 3soc_A          102 AFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL  179 (322)
T ss_dssp             ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             ecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence            999999999999764  489999999999999999999985       12369999999999999999999999999998


Q ss_pred             ccCCCCCc-ccccccccccccCccccCC-----CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          893 LLDGEDSV-TQTMTLATFGYMAPEYGSE-----GIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       893 ~~~~~~~~-~~~~~~gt~~Y~aPE~~~~-----~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ........ ......||+.|+|||++..     ..++.++|||||||++|||+||+.||...
T Consensus       180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~  241 (322)
T 3soc_A          180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP  241 (322)
T ss_dssp             EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred             ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence            77544332 2233579999999998875     35677899999999999999999998653


No 334
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=5.5e-34  Score=341.30  Aligned_cols=204  Identities=23%  Similarity=0.355  Sum_probs=174.0

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      .++|+..+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.++++++|||||++++++.+.+..|+|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            468889999999999999999865 789999999875432 234668899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC-
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS-  899 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~-  899 (1624)
                      |+++|+|.+++... ..+++.++..|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.+..... 
T Consensus        86 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             cCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence            99999999998654 3689999999999999999999984   599999999999999999999999999987643221 


Q ss_pred             cccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCCccCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIETFTRKMPTDEMFT  950 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DvwS~Gvil~elltg~~P~~~~~~  950 (1624)
                      .......||+.|+|||++....+ +.++|||||||++|||+||+.||.....
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  213 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD  213 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch
Confidence            12234579999999999876665 7889999999999999999999975433


No 335
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=1.9e-33  Score=340.01  Aligned_cols=196  Identities=26%  Similarity=0.317  Sum_probs=175.9

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..|+||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            57888899999999999999865 68999999997542   234567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||+++|+|.+++...+ .+++.++..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....  
T Consensus       121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--  194 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred             cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence            9999999999998654 689999999999999999999984   5999999999999999999999999999976543  


Q ss_pred             cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                        ....+||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  240 (350)
T 1rdq_E          195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA  240 (350)
T ss_dssp             --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC
Confidence              2234799999999999888899999999999999999999999864


No 336
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1.9e-33  Score=343.22  Aligned_cols=195  Identities=23%  Similarity=0.400  Sum_probs=169.7

Q ss_pred             CcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEecCCCC
Q 047591          748 ESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGS  826 (1624)
Q Consensus       748 ~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs  826 (1624)
                      ..+.||+|+||+||+|.. .+|+.||||++........+.|.+|++++++++|||||++++++.+.+..++||||+++|+
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~  172 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE  172 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence            356899999999999986 4689999999987655566789999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee--CCCCceEEEeeeeeeccCCCCCccccc
Q 047591          827 LEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL--DDDTVAHLSDFGISKLLDGEDSVTQTM  904 (1624)
Q Consensus       827 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl--d~~~~~kl~DFGla~~~~~~~~~~~~~  904 (1624)
                      |.+++......+++.++..++.|+++||+|||+.   +|+||||||+|||+  +.++.+||+|||+++.......  ...
T Consensus       173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~~  247 (373)
T 2x4f_A          173 LFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKV  247 (373)
T ss_dssp             EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CCC
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--ccc
Confidence            9999987766799999999999999999999984   59999999999999  6778999999999998754332  223


Q ss_pred             ccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          905 TLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       905 ~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ..||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  290 (373)
T 2x4f_A          248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG  290 (373)
T ss_dssp             CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence            4699999999999888999999999999999999999999864


No 337
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00  E-value=1.4e-33  Score=338.21  Aligned_cols=284  Identities=21%  Similarity=0.300  Sum_probs=178.4

Q ss_pred             cCChhhHHHHHHHHHHhccCCccccccCCCCCCCCCCCCCCCCccceeeEecC--------CCCcEEEEecCCCCCCccC
Q 047591           34 ANITTDEAALLQVKAHIALDPQNFFERNWNLSATTNTSSSNSVCNWVGVTCGS--------RHGRVTDLSIPNLGLGGTI  105 (1624)
Q Consensus        34 ~~~~~d~~aLl~~k~~~~~~p~~~~~~~W~~~~~~~~~~~~~~C~W~Gv~C~~--------~~~~v~~l~l~~~~l~g~i  105 (1624)
                      +...+|++||++||+++..||.++. ++|..+.    ....++|.|.||+|+.        ...+|+.|+|+++++. .+
T Consensus        23 ~~~~~~~~aLl~~k~~~~~~~~~~~-~~w~~~~----~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~l   96 (328)
T 4fcg_A           23 TALRPYHDVLSQWQRHYNADRNRWH-SAWRQAN----SNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QF   96 (328)
T ss_dssp             CCCCCHHHHHHHHHHHHHHCCTTHH-HHHHHHT----TTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SC
T ss_pred             ccCchHHHHHHHHHHhccCCchhhh-hhhcccc----cccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hc
Confidence            4678899999999999988887765 5785221    1246889999999953        3467788888887777 77


Q ss_pred             CccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCC
Q 047591          106 PPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDC  185 (1624)
Q Consensus       106 p~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l  185 (1624)
                      |+.+++|++|++|+|++|+++ .+|..++.+++|++|+|++|+++ .+|+. +..+++|++|+|++|++.+.+|..++..
T Consensus        97 p~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~-l~~l~~L~~L~L~~n~~~~~~p~~~~~~  173 (328)
T 4fcg_A           97 PDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPAS-IASLNRLRELSIRACPELTELPEPLAST  173 (328)
T ss_dssp             CSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGG-GGGCTTCCEEEEEEETTCCCCCSCSEEE
T ss_pred             ChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHH-HhcCcCCCEEECCCCCCccccChhHhhc
Confidence            777888888888888888887 77877777778888888877777 55554 4567777777777777777777665540


Q ss_pred             CcccccccccccccccccCcccccccccceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEee
Q 047591          186 SKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELN  265 (1624)
Q Consensus       186 ~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~  265 (1624)
                                     .++..|+++++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|.. +..+++|++|+
T Consensus       174 ---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~-l~~l~~L~~L~  235 (328)
T 4fcg_A          174 ---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPA-IHHLPKLEELD  235 (328)
T ss_dssp             ---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGG-GGGCTTCCEEE
T ss_pred             ---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchh-hccCCCCCEEE
Confidence                           01111223444555555555444 444444445555555555555442 3333 23455555555


Q ss_pred             cccccccCcCCccccccCcCCeeeccCCcccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEE
Q 047591          266 LRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRL  345 (1624)
Q Consensus       266 Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L  345 (1624)
                      |++|.+.+.+|..++.+++|++|+|++|.        +.+.+|..+.++++|+.|+|++|++.|.+|+.++ ++++|+.+
T Consensus       236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~--------~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~-~L~~L~~l  306 (328)
T 4fcg_A          236 LRGCTALRNYPPIFGGRAPLKRLILKDCS--------NLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA-QLPANCII  306 (328)
T ss_dssp             CTTCTTCCBCCCCTTCCCCCCEEECTTCT--------TCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG-GSCTTCEE
T ss_pred             CcCCcchhhhHHHhcCCCCCCEEECCCCC--------chhhcchhhhcCCCCCEEeCCCCCchhhccHHHh-hccCceEE
Confidence            55555555555555555555555555443        3344555555555566666666666666666554 56666666


Q ss_pred             EecCCccC
Q 047591          346 YLWGNNLS  353 (1624)
Q Consensus       346 ~Ls~N~l~  353 (1624)
                      ++..|.+.
T Consensus       307 ~l~~~~~~  314 (328)
T 4fcg_A          307 LVPPHLQA  314 (328)
T ss_dssp             ECCGGGSC
T ss_pred             eCCHHHHH
Confidence            66655444


No 338
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-33  Score=343.35  Aligned_cols=200  Identities=21%  Similarity=0.363  Sum_probs=178.5

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      .++|...+.||+|+||+||+|... +|+.||+|++..........+.+|++++++++|||||++++++.+....++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            467889999999999999999864 6899999999766544556789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCC--CCceEEEeeeeeeccCCCCC
Q 047591          822 MPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD--DTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~--~~~~kl~DFGla~~~~~~~~  899 (1624)
                      +++|+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+|||++.  ++.+||+|||+|+.......
T Consensus       130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~  206 (387)
T 1kob_A          130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI  206 (387)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence            999999999987666799999999999999999999984   5999999999999984  46799999999998754432


Q ss_pred             cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                        .....||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~  252 (387)
T 1kob_A          207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG  252 (387)
T ss_dssp             --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCC
Confidence              2234699999999999988999999999999999999999999865


No 339
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.6e-33  Score=337.93  Aligned_cols=200  Identities=27%  Similarity=0.372  Sum_probs=166.0

Q ss_pred             cCCCCCcceeecCCccceEEEEe----cCCCEEEEEEeeccc----chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCe
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQL----DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGF  814 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~----~~g~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~  814 (1624)
                      .++|...+.||+|+||+||+|+.    .+|+.||||+++...    ......+.+|++++++++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            35788899999999999999986    478999999987542    2234568899999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeecc
Q 047591          815 KALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL  894 (1624)
Q Consensus       815 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~  894 (1624)
                      .|+||||+++|+|.+++.... .+++.++..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~  171 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES  171 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred             EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence            999999999999999997654 688999999999999999999994   5999999999999999999999999999865


Q ss_pred             CCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          895 DGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       895 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ..... ......||+.|+|||++....++.++|||||||++|||++|+.||..
T Consensus       172 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  223 (327)
T 3a62_A          172 IHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG  223 (327)
T ss_dssp             --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence            43322 22334699999999999888899999999999999999999999865


No 340
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00  E-value=6.3e-33  Score=341.47  Aligned_cols=310  Identities=23%  Similarity=0.256  Sum_probs=183.6

Q ss_pred             cCccchheeccccccCCCCccccccCCCCcEeecccccccCcCCccccccCcCCeeeccCCcccccCccccccccccccc
Q 047591          233 VSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIF  312 (1624)
Q Consensus       233 l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~  312 (1624)
                      ++++++|++++|.++ .+|..++..+++|++|+|++|.+++..|..|+.+++|++|+|++|++..        ..|..+.
T Consensus        44 l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~--------~~~~~~~  114 (390)
T 3o6n_A           44 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY--------LPPHVFQ  114 (390)
T ss_dssp             GCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC--------CCTTTTT
T ss_pred             cCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCc--------CCHHHhc
Confidence            455666666666654 5666666667777777777777776666677777777777777665433        3344455


Q ss_pred             cCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCccccccCcccccccccccE
Q 047591          313 NNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQI  392 (1624)
Q Consensus       313 ~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~  392 (1624)
                      ++.+|++|+|++|+++ .+|..++..+++|++|+|++|++++..|..|.++++|++|+|++|++++..   ++.+++|+.
T Consensus       115 ~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~  190 (390)
T 3o6n_A          115 NVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFH  190 (390)
T ss_dssp             TCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSE
T ss_pred             CCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccce
Confidence            5666666666666666 456555456777777777777777666666777777777777777776652   445566666


Q ss_pred             EEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccE
Q 047591          393 LNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIA  472 (1624)
Q Consensus       393 L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~  472 (1624)
                      |++++|.+...            ....                                                 +|++
T Consensus       191 L~l~~n~l~~~------------~~~~-------------------------------------------------~L~~  209 (390)
T 3o6n_A          191 ANVSYNLLSTL------------AIPI-------------------------------------------------AVEE  209 (390)
T ss_dssp             EECCSSCCSEE------------ECCS-------------------------------------------------SCSE
T ss_pred             eeccccccccc------------CCCC-------------------------------------------------cceE
Confidence            66666655321            1111                                                 2333


Q ss_pred             EeccCCccCCCccchhccccccceecccccccccCCCccccCCCCCceeecccccccCCCccccccccCCccccccCccc
Q 047591          473 LSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNRL  552 (1624)
Q Consensus       473 L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l  552 (1624)
                      |++++|+++. +|...  .++|+.|+|++|++++.  +.+..+++|+.|+|++|++++..|..|+++++|+.|+|++|++
T Consensus       210 L~l~~n~l~~-~~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l  284 (390)
T 3o6n_A          210 LDASHNSINV-VRGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL  284 (390)
T ss_dssp             EECCSSCCCE-EECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCC
T ss_pred             EECCCCeeee-ccccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcC
Confidence            4444444432 12211  23444444444444432  3444455555555555555544455555555555555555555


Q ss_pred             cccCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCccccccCCccccccccccCCCCC
Q 047591          553 NSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQG  626 (1624)
Q Consensus       553 ~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g  626 (1624)
                      ++ +|..+..+++|+.||+++|+++ .+|..++.+++|+.|+|++|+++. +|  +..+++|+.|++++|++++
T Consensus       285 ~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~  353 (390)
T 3o6n_A          285 VA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDC  353 (390)
T ss_dssp             CE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEH
T ss_pred             cc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCccc
Confidence            43 3444455555555555555555 366667777777777777777763 44  5667777777888887765


No 341
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.4e-33  Score=334.01  Aligned_cols=199  Identities=23%  Similarity=0.364  Sum_probs=175.8

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccch------hHHHHHHHHHHHHhcCCCceeeeeeeeccCCeE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDG------AIKSFDAECEVLRRVRHRNLVKIISSCSNHGFK  815 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~  815 (1624)
                      .+.|...+.||+|+||+||+|+.. +|+.||||++......      ..+.+.+|+.++++++||||+++++++.+....
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            356888899999999999999865 6899999998754321      356799999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCC----ceEEEeeeee
Q 047591          816 ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT----VAHLSDFGIS  891 (1624)
Q Consensus       816 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~----~~kl~DFGla  891 (1624)
                      ++||||+++|+|.+++... ..+++.++..++.|++.||+|||+.   +|+||||||+|||++.++    .+||+|||++
T Consensus        90 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  165 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  165 (326)
T ss_dssp             EEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence            9999999999999999754 4689999999999999999999984   599999999999999887    7999999999


Q ss_pred             eccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          892 KLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       892 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      +.......  .....||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       166 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  219 (326)
T 2y0a_A          166 HKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  219 (326)
T ss_dssp             EECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             eECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence            88754322  2234699999999999888899999999999999999999999864


No 342
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=1.6e-33  Score=335.63  Aligned_cols=196  Identities=25%  Similarity=0.293  Sum_probs=166.5

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc--hhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD--GAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ++|+..+.||+|+||+||+|+.. +|+.||||++.....  .....+.+|+..+.++ +|||||+++++|.+++..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            57888999999999999999875 799999999864332  2334556666666665 8999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||+ +|+|.+++......++|.++..|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... 
T Consensus       137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~-  211 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG-  211 (311)
T ss_dssp             ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred             ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence            999 6799999988777899999999999999999999984   59999999999999999999999999998765432 


Q ss_pred             cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCC
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTD  946 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~  946 (1624)
                       ......||++|+|||++.+ .++.++|||||||++|||++|+.|+.
T Consensus       212 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~  256 (311)
T 3p1a_A          212 -AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPH  256 (311)
T ss_dssp             ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCS
T ss_pred             -CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence             2334469999999998765 78999999999999999999976653


No 343
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=2.1e-33  Score=369.98  Aligned_cols=241  Identities=19%  Similarity=0.315  Sum_probs=194.3

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc--CCceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCe-----e
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA--DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGF-----K 1406 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~--~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~-----~ 1406 (1624)
                      ++|...+.||+|+||+||+|++.  +++.||||++... .....+.|.+|++++++++|||||++++++...+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            67888899999999999999885  5889999988643 33456789999999999999999999999977655     6


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecC
Q 047591         1407 ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~ 1486 (1624)
                      ++||||+++++|.+++..   .+++.+++.|+.||++||+|||+   .+||||||||+|||++++ .+||+|||+++...
T Consensus       160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~  232 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN  232 (681)
T ss_dssp             EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred             EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence            999999999999988754   58999999999999999999996   799999999999999986 89999999998765


Q ss_pred             CCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhc
Q 047591         1487 GVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANL 1566 (1624)
Q Consensus      1487 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 1566 (1624)
                      ..     ....||++|||||++.++ ++.++|||||||++|||++|..|+.......          .+..         
T Consensus       233 ~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------~~~~---------  287 (681)
T 2pzi_A          233 SF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG----------LPED---------  287 (681)
T ss_dssp             CC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS----------CCTT---------
T ss_pred             cC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc----------cccc---------
Confidence            32     345799999999987655 4899999999999999999998876422110          0100         


Q ss_pred             cCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCC-HHHHHHHHHHHHHH
Q 047591         1567 LSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMN-VKDALANLKKIKTK 1616 (1624)
Q Consensus      1567 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt-~~evl~~L~~i~~~ 1616 (1624)
                         .      ....+...+.+++.+||+.||++||+ ++++...|..+...
T Consensus       288 ---~------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~  329 (681)
T 2pzi_A          288 ---D------PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE  329 (681)
T ss_dssp             ---C------HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred             ---c------cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence               0      00122356788999999999999995 66677777776543


No 344
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=2.5e-33  Score=339.71  Aligned_cols=200  Identities=22%  Similarity=0.355  Sum_probs=173.9

Q ss_pred             CCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc-----chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL-----DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      +.|...+.||+|+||+||+|.. .+|+.||||++....     ....+.+.+|+.++++++|||||++++++.+++..|+
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            4688889999999999999986 468999999986432     1135679999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCc---eEEEeeeee
Q 047591          818 ILEYMPQGSLEKWLYSH---KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV---AHLSDFGIS  891 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~---~kl~DFGla  891 (1624)
                      |||||++|+|.+++...   ...+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.   +||+|||++
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            99999999999888643   23589999999999999999999984   5999999999999987654   999999999


Q ss_pred             eccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          892 KLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       892 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      +....... ......||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       181 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  235 (351)
T 3c0i_A          181 IQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG  235 (351)
T ss_dssp             EECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             eEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence            88754332 22345799999999999888899999999999999999999999865


No 345
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.5e-33  Score=342.77  Aligned_cols=213  Identities=25%  Similarity=0.429  Sum_probs=180.4

Q ss_pred             ccCHHHHHhhcCCCCCcceeecCCccceEEEEe------cCCCEEEEEEeecccc-hhHHHHHHHHHHHHhc-CCCceee
Q 047591          733 RISYQELQRLTDGFSESNLIGAGSFGSVYKATL------PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRV-RHRNLVK  804 (1624)
Q Consensus       733 ~~~~~el~~~t~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~  804 (1624)
                      .+...+.+...++|...+.||+|+||.||+|++      .+++.||||++..... ...+.+.+|+++++++ +|||||+
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            344556666778999999999999999999973      2468999999975433 3456799999999999 7999999


Q ss_pred             eeeeeccCC-eEEEEEEecCCCCHHHHHHhcCC-----------------------------------------------
Q 047591          805 IISSCSNHG-FKALILEYMPQGSLEKWLYSHKY-----------------------------------------------  836 (1624)
Q Consensus       805 l~~~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~-----------------------------------------------  836 (1624)
                      ++++|.+.+ ..++||||+++|+|.++++....                                               
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            999988755 48999999999999999976532                                               


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          837 ------------------TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       837 ------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                                        .+++..+..|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence                              188999999999999999999994   59999999999999999999999999998764432


Q ss_pred             C-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          899 S-VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       899 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      . .......||+.|+|||++....++.++|||||||++|||+| |+.||...
T Consensus       248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  299 (359)
T 3vhe_A          248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  299 (359)
T ss_dssp             TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence            2 22334568999999999888889999999999999999999 99998654


No 346
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=3e-33  Score=340.20  Aligned_cols=201  Identities=20%  Similarity=0.401  Sum_probs=176.3

Q ss_pred             hhcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEE
Q 047591          741 RLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       741 ~~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      ...++|...+.||+|+||+||+|... +|+.||||++....  ....+.+.+|++++++++|||||++++++.+.+..|+
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            34567889999999999999999864 68999999997543  2345678999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCC---CceEEEeeeeeecc
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDD---TVAHLSDFGISKLL  894 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~---~~~kl~DFGla~~~  894 (1624)
                      ||||+++|+|.+++.... .+++.++..++.||+.||+|||+.   +|+||||||+|||++.+   +.+||+|||+++..
T Consensus       106 v~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~  181 (362)
T 2bdw_A          106 VFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  181 (362)
T ss_dssp             EECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred             EEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence            999999999999997643 689999999999999999999995   59999999999999865   45999999999876


Q ss_pred             CCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          895 DGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       895 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .....  .....||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       182 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~  232 (362)
T 2bdw_A          182 NDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD  232 (362)
T ss_dssp             TTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            54322  2335799999999999888899999999999999999999999864


No 347
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=3.5e-33  Score=335.53  Aligned_cols=200  Identities=21%  Similarity=0.284  Sum_probs=176.1

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCeEEEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      .++|...+.||+|+||+||+|+. .+|+.||||++.....  .+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            46788999999999999999985 5789999999875432  34688999999999 99999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCc-----eEEEeeeeeeccC
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV-----AHLSDFGISKLLD  895 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~-----~kl~DFGla~~~~  895 (1624)
                      |+ +|+|.+++......+++.++..|+.|++.||+|||+.   +|+||||||+|||++.++.     +||+|||+|+...
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~  161 (330)
T 2izr_A           86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI  161 (330)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred             eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence            99 9999999987666899999999999999999999985   5999999999999999887     9999999999765


Q ss_pred             CCCCcc------cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          896 GEDSVT------QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       896 ~~~~~~------~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ......      .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~  220 (330)
T 2izr_A          162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL  220 (330)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccc
Confidence            433211      23457999999999999989999999999999999999999999764


No 348
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=3.6e-33  Score=330.55  Aligned_cols=208  Identities=28%  Similarity=0.421  Sum_probs=170.6

Q ss_pred             hcCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHh--cCCCceeeeeeeecc----CCeE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRR--VRHRNLVKIISSCSN----HGFK  815 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~----~~~~  815 (1624)
                      ..++|...+.||+|+||+||+|+. +|+.||||++...   ..+.+.+|.+++..  ++||||+++++++..    ....
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~   81 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL   81 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence            356788999999999999999987 6899999998643   33556677777776  799999999998643    3568


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEeCcCCCCCeeeCCCCceEEEeeee
Q 047591          816 ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG-----HPTPVIHCDLKPSNVLLDDDTVAHLSDFGI  890 (1624)
Q Consensus       816 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~IiHrDlKp~NILld~~~~~kl~DFGl  890 (1624)
                      ++||||+++|+|.++++.  ..+++..+.+|+.|++.||+|||..     +..+|+||||||+|||++.++.+||+|||+
T Consensus        82 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             EEEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence            999999999999999954  3689999999999999999999932     125799999999999999999999999999


Q ss_pred             eeccCCCCCcc---cccccccccccCccccCCC------CCCcchhHHHHHHHHHHHHcC----------CCCCCccCcC
Q 047591          891 SKLLDGEDSVT---QTMTLATFGYMAPEYGSEG------IVSTCGDVYSFGILMIETFTR----------KMPTDEMFTG  951 (1624)
Q Consensus       891 a~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~~~k~DvwS~Gvil~elltg----------~~P~~~~~~~  951 (1624)
                      |+.........   .....||+.|+|||++...      .++.++|||||||++|||+||          +.||......
T Consensus       160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~  239 (301)
T 3q4u_A          160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN  239 (301)
T ss_dssp             CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence            98765433221   2234799999999988766      456799999999999999999          7887665444


Q ss_pred             cchH
Q 047591          952 ETSL  955 (1624)
Q Consensus       952 ~~~l  955 (1624)
                      ....
T Consensus       240 ~~~~  243 (301)
T 3q4u_A          240 DPSF  243 (301)
T ss_dssp             SCCH
T ss_pred             Ccch
Confidence            4333


No 349
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=2.2e-33  Score=341.80  Aligned_cols=199  Identities=29%  Similarity=0.330  Sum_probs=166.0

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHH-HHhcCCCceeeeeeeeccCCeEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEV-LRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++....   ....+.+.+|..+ ++.++|||||++++++.+.+..|+|
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            56888899999999999999875 58899999997543   2234556777776 5778999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++|+|.+++.... .+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       118 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~  193 (373)
T 2r5t_A          118 LDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN  193 (373)
T ss_dssp             EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred             EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence            99999999999997644 688899999999999999999984   59999999999999999999999999998643322


Q ss_pred             CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      . .....+||+.|+|||++....++.++|||||||++|||++|+.||..
T Consensus       194 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~  241 (373)
T 2r5t_A          194 S-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS  241 (373)
T ss_dssp             C-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             C-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence            2 23345799999999999988999999999999999999999999864


No 350
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=4.2e-33  Score=346.87  Aligned_cols=201  Identities=22%  Similarity=0.332  Sum_probs=175.5

Q ss_pred             hcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      ..++|...+.||+|+||+||+|.. .+|+.||+|++.....  ...+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            456788999999999999999985 4789999999975532  3456789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeC---CCCceEEEeeeeeeccC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISKLLD  895 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld---~~~~~kl~DFGla~~~~  895 (1624)
                      ||||++|+|.+++.... .+++.++..++.|++.||+|||+.   +|+||||||+|||++   +++.+||+|||+|+...
T Consensus        89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~  164 (444)
T 3soa_A           89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE  164 (444)
T ss_dssp             ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred             EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence            99999999999998754 689999999999999999999994   599999999999998   46789999999998775


Q ss_pred             CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          896 GEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       896 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ..... .....||++|+|||++....++.++||||+||++|||++|+.||..
T Consensus       165 ~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~  215 (444)
T 3soa_A          165 GEQQA-WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD  215 (444)
T ss_dssp             TTCCB-CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCce-eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence            44322 2335799999999999888999999999999999999999999864


No 351
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=3.5e-33  Score=335.33  Aligned_cols=198  Identities=26%  Similarity=0.441  Sum_probs=174.2

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      .++|...+.||+|+||+||+|+. .+|+.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            46788899999999999999986 578999999987542   22345789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+ +|+|.+++.... .+++.++..++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+++......
T Consensus        88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~  162 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN  162 (336)
T ss_dssp             ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred             EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence            9999 789999987654 689999999999999999999985   59999999999999999999999999998765433


Q ss_pred             CcccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .  ....+||+.|+|||++.+..+ +.++|||||||++|||+||+.||+.
T Consensus       163 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~  210 (336)
T 3h4j_B          163 F--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD  210 (336)
T ss_dssp             T--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBC
T ss_pred             c--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCC
Confidence            2  233479999999999887665 7899999999999999999999865


No 352
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=2.5e-33  Score=330.08  Aligned_cols=200  Identities=26%  Similarity=0.395  Sum_probs=172.1

Q ss_pred             CCCCCcceeecCCccceEEEEecCCCEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          744 DGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      ++|...+.||+|+||+||+|+..+|+.||||++.....  ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            46888899999999999999988899999999865432  2346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCcc
Q 047591          822 MPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT  901 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~  901 (1624)
                      +++ +|.+++......+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++....... .
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~  156 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-K  156 (288)
T ss_dssp             CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-c
Confidence            985 99999987666799999999999999999999984   599999999999999999999999999987653322 2


Q ss_pred             cccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          902 QTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       902 ~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~  204 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV  204 (288)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            233468999999998865 45899999999999999999999998653


No 353
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=3.3e-33  Score=354.22  Aligned_cols=201  Identities=24%  Similarity=0.355  Sum_probs=178.0

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||++....   ......+.+|+++|++++|||||++++++.+.+..|+|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            457888899999999999999874 79999999997532   23346788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          819 LEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      ||||++|+|.+++.... ..+++..+..|+.||+.||+|||+.   +||||||||+|||++.++.+||+|||+|+.....
T Consensus       263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~  339 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  339 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence            99999999999997654 2489999999999999999999994   5999999999999999999999999999887543


Q ss_pred             CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       898 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ..  ....+||+.|+|||++....++.++|||||||++|||+||+.||...
T Consensus       340 ~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~  388 (576)
T 2acx_A          340 QT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR  388 (576)
T ss_dssp             CC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred             cc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence            32  23347999999999998888999999999999999999999999753


No 354
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=5.4e-33  Score=351.82  Aligned_cols=202  Identities=25%  Similarity=0.355  Sum_probs=178.3

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      .++|...++||+|+||+||+|+.. +|+.||||++....   ....+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            367888899999999999999874 69999999997542   23346789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccC
Q 047591          819 LEYMPQGSLEKWLYSHK---YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD  895 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~  895 (1624)
                      |||+++|+|.+++....   ..+++..+..|+.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            99999999999997643   3689999999999999999999984   59999999999999999999999999999875


Q ss_pred             CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          896 GEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       896 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ..... ....+||+.|||||++.+..++.++|||||||++|||+||+.||...
T Consensus       341 ~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~  392 (543)
T 3c4z_A          341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR  392 (543)
T ss_dssp             TTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred             CCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence            44322 23347999999999999889999999999999999999999999753


No 355
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=1.2e-33  Score=350.02  Aligned_cols=248  Identities=19%  Similarity=0.199  Sum_probs=183.0

Q ss_pred             hCCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCC-Ccee--------------
Q 047591         1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRH-RNLA-------------- 1394 (1624)
Q Consensus      1334 t~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~H-pNIv-------------- 1394 (1624)
                      +..|...++||+|+||+||+|++. +|+.||||++....   ....+.|.+|+.+++.++| +|..              
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            345666789999999999999864 68999999987332   2336789999999999987 3211              


Q ss_pred             -EE------Eeeecc-----CCeeEEEEEecCCCCHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCce
Q 047591         1395 -KI------VSSCSN-----PGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456 (1624)
Q Consensus      1395 -~l------~g~~~~-----~~~~~lV~ey~~~gsL~~~l~------~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~i 1456 (1624)
                       .+      +.++..     ....+++|+++ +|+|.+++.      ..+..+++..++.|+.||++||+|||+   .+|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i  232 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL  232 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCc
Confidence             11      111111     12345666654 689999884      224457888999999999999999996   799


Q ss_pred             EEcCCCCCcEEecCCCcEEEeeecceeecCCCCCcccccccccccccccccc----------CCCCcCcccchHHHHHHH
Q 047591         1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYG----------SEGIVSTSGDVYSFGILM 1526 (1624)
Q Consensus      1457 iHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~----------~~~~~~~k~DV~SfGvil 1526 (1624)
                      |||||||+|||++.++.+||+|||+|+.....    .....| +.|||||++          ....++.++|||||||++
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil  307 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI  307 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence            99999999999999999999999999875432    334567 999999988          666789999999999999


Q ss_pred             HHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHH
Q 047591         1527 METLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDA 1606 (1624)
Q Consensus      1527 ~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~ev 1606 (1624)
                      |||+||+.||......+..     ...        +     ...        ..++..+.+++.+||+.+|++|||+.|+
T Consensus       308 ~elltg~~Pf~~~~~~~~~-----~~~--------~-----~~~--------~~~~~~~~~li~~~l~~dP~~Rpt~~~~  361 (413)
T 3dzo_A          308 YWIWCADLPNTDDAALGGS-----EWI--------F-----RSC--------KNIPQPVRALLEGFLRYPKEDRLLPLQA  361 (413)
T ss_dssp             HHHHHSSCCCCTTGGGSCS-----GGG--------G-----SSC--------CCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHCCCCCCCcchhhhH-----HHH--------H-----hhc--------ccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            9999999999753221110     000        0     000        0123567889999999999999999998


Q ss_pred             HHH--HHHHHHH
Q 047591         1607 LAN--LKKIKTK 1616 (1624)
Q Consensus      1607 l~~--L~~i~~~ 1616 (1624)
                      ++.  +++++..
T Consensus       362 l~~~~~~~~~~~  373 (413)
T 3dzo_A          362 METPEYEQLRTE  373 (413)
T ss_dssp             TTSHHHHHHHHH
T ss_pred             HhCHHHHHHHHH
Confidence            764  4554443


No 356
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=8.3e-34  Score=362.64  Aligned_cols=264  Identities=22%  Similarity=0.282  Sum_probs=196.4

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccc-hhhHHHHHHHHHHHHHhcCCCceeEEEeeecc------CCee
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFDAECEVMRRIRHRNLAKIVSSCSN------PGFK 1406 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~-~~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~------~~~~ 1406 (1624)
                      ++|...+.||+|+||+||+|... +|+.||||+++.. .....+.|.+|++++++++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            56888899999999999999874 6889999988643 34456789999999999999999999998765      6678


Q ss_pred             EEEEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCc---EEEeeecc
Q 047591         1407 ALILQYMPQGSLEKWLYSHN--YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV---AHLGDFGI 1481 (1624)
Q Consensus      1407 ~lV~ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~---~kl~DFGl 1481 (1624)
                      ++||||+++|+|.+++....  ..+++..+..|+.|++.||+|||+   .+|+||||||+||+++.++.   +||+|||+
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence            99999999999999998643  357888999999999999999996   79999999999999997664   99999999


Q ss_pred             eeecCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHH
Q 047591         1482 AKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDV 1561 (1624)
Q Consensus      1482 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~ 1561 (1624)
                      |+......  ......||+.|+|||++.+..++.++|||||||++|||+||+.||.....    ...|..........+.
T Consensus       171 a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~i~~~~~~~~  244 (676)
T 3qa8_A          171 AKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGKVREKSNEHI  244 (676)
T ss_dssp             CCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTTCC------C
T ss_pred             cccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhhhhcccchhh
Confidence            98765432  22345799999999999999999999999999999999999999965321    1122211110000000


Q ss_pred             H-hhhccC-----CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHH
Q 047591         1562 I-DANLLS-----GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDAL 1607 (1624)
Q Consensus      1562 ~-d~~l~~-----~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl 1607 (1624)
                      . ......     .............+..+.+++.+|++.||++|||+.|++
T Consensus       245 ~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL  296 (676)
T 3qa8_A          245 VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP  296 (676)
T ss_dssp             CSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred             hhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence            0 000000     000000000112456788999999999999999998843


No 357
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=2.6e-33  Score=341.47  Aligned_cols=229  Identities=18%  Similarity=0.250  Sum_probs=181.2

Q ss_pred             hcCCCCCcceeecCCccceEEEEecC------CCEEEEEEeecccchh-----------HHHHHHHHHHHHhcCCCceee
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLPY------GMNVAIKVFNLQLDGA-----------IKSFDAECEVLRRVRHRNLVK  804 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~~------g~~vAvK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~niv~  804 (1624)
                      ..++|...+.||+|+||+||+|....      ++.||||++.......           ...+..|+..+++++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            35689999999999999999998754      4789999987543211           123445666777889999999


Q ss_pred             eeeeeccC----CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeC--
Q 047591          805 IISSCSNH----GFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLD--  878 (1624)
Q Consensus       805 l~~~~~~~----~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld--  878 (1624)
                      +++++...    ...|+||||+ +|+|.+++......+++.++..|+.|++.||+|||+.   +|+||||||+|||++  
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~  188 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK  188 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence            99998764    4589999999 9999999988767899999999999999999999994   599999999999999  


Q ss_pred             CCCceEEEeeeeeeccCCCCCcc------cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCccCcCc
Q 047591          879 DDTVAHLSDFGISKLLDGEDSVT------QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGE  952 (1624)
Q Consensus       879 ~~~~~kl~DFGla~~~~~~~~~~------~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~~~~~  952 (1624)
                      .++.+||+|||+|+.+.......      .....||+.|||||++.+..++.++|||||||++|||+||+.||...... 
T Consensus       189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~-  267 (364)
T 3op5_A          189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD-  267 (364)
T ss_dssp             CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-
T ss_pred             CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-
Confidence            88999999999998765332211      12345999999999999888999999999999999999999999754332 


Q ss_pred             chHHHHHHHHhhhhhhhccchhc
Q 047591          953 TSLKKWVEESLRLAVTEVVDAEL  975 (1624)
Q Consensus       953 ~~l~~~~~~~~~~~~~~~~d~~L  975 (1624)
                      .....+.....+..+.++++.++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~  290 (364)
T 3op5_A          268 PKYVRDSKIRYRENIASLMDKCF  290 (364)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHHS
T ss_pred             HHHHHHHHHHhhhhHHHHHHHhc
Confidence            22333344444445556666554


No 358
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.8e-33  Score=332.40  Aligned_cols=201  Identities=29%  Similarity=0.486  Sum_probs=171.6

Q ss_pred             CCCCCcceeecCCccceEEEEe-----cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeecc--CCeEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-----PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN--HGFKA  816 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~  816 (1624)
                      ++|+..+.||+|+||+||+|++     .+++.||||++........+.|.+|++++++++||||++++++|..  ....+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            5677889999999999999984     3689999999986655666789999999999999999999999854  35589


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCC
Q 047591          817 LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG  896 (1624)
Q Consensus       817 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~  896 (1624)
                      +||||+++|+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++....
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~  166 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ  166 (295)
T ss_dssp             EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred             EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence            99999999999999988776799999999999999999999984   599999999999999999999999999987654


Q ss_pred             CCCc--ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          897 EDSV--TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       897 ~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ....  ......+|..|+|||.+....++.++|||||||++|||+||..|+..
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~  219 (295)
T 3ugc_A          167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS  219 (295)
T ss_dssp             ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred             CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence            3221  12234578889999999888899999999999999999999999754


No 359
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=2.1e-33  Score=329.69  Aligned_cols=202  Identities=28%  Similarity=0.447  Sum_probs=175.8

Q ss_pred             cCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEec
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYM  822 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~  822 (1624)
                      .++|...+.||+|+||+||+|...++..||||++..... ..+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            356788899999999999999998888999999975432 3467899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCccc
Q 047591          823 PQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQ  902 (1624)
Q Consensus       823 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~  902 (1624)
                      ++|+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+||++++++.+||+|||+++..........
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  178 (283)
T 3gen_A          102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS  178 (283)
T ss_dssp             TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred             CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence            99999999987666799999999999999999999984   599999999999999999999999999987654332223


Q ss_pred             ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       903 ~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ....+|+.|+|||++....++.++||||||+++|||+| |+.||...
T Consensus       179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~  225 (283)
T 3gen_A          179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF  225 (283)
T ss_dssp             TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence            33457889999999888889999999999999999999 99998753


No 360
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=1e-32  Score=325.43  Aligned_cols=199  Identities=25%  Similarity=0.359  Sum_probs=172.6

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      ++|+..+.||+|+||+||+|+.. +|+.||||++.....  ...+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            46888899999999999999864 689999999975432  334678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCc
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV  900 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~  900 (1624)
                      |+++ ++.+++......+++.++..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+....... 
T Consensus        82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-  156 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-  156 (292)
T ss_dssp             CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence            9985 77777766666799999999999999999999995   599999999999999999999999999987653322 


Q ss_pred             ccccccccccccCccccCCCC-CCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          901 TQTMTLATFGYMAPEYGSEGI-VSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       901 ~~~~~~gt~~Y~aPE~~~~~~-~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ......||+.|+|||++.+.. ++.++|||||||++|||+||+.|+..
T Consensus       157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~  204 (292)
T 3o0g_A          157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP  204 (292)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred             cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC
Confidence            223457899999999886655 79999999999999999999988643


No 361
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=8.4e-33  Score=324.94  Aligned_cols=230  Identities=13%  Similarity=0.081  Sum_probs=183.7

Q ss_pred             CCCCcCCeEeecCceEEEEEEEc-CCceEEEEEeccch---hhHHHHHHHHHHHHHhcCCCceeEEEeeeccCCeeEEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALIL 1410 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~---~~~~~~f~~E~~~l~~l~HpNIv~l~g~~~~~~~~~lV~ 1410 (1624)
                      +.|...+.||+|+||+||+|+.. +++.||||++....   ....+.|.+|++++++++||||+++++++.+.+..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            46777889999999999999886 48999999996432   344578999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecCCCcEEEeeecceeecCCCCC
Q 047591         1411 QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490 (1624)
Q Consensus      1411 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~kl~DFGla~~~~~~~~ 1490 (1624)
                      ||+++++|.+++...   ....+..+|+.|++.||+|||+   .+|+||||||+|||++.++.+||+++           
T Consensus       111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~-----------  173 (286)
T 3uqc_A          111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYP-----------  173 (286)
T ss_dssp             ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSC-----------
T ss_pred             EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEec-----------
Confidence            999999999999542   3556788899999999999997   79999999999999999999999744           


Q ss_pred             ccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchh--hhhhhhhcCChhHHHHHhhhccC
Q 047591         1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVC--LKHWVEESLPDAVTDVIDANLLS 1568 (1624)
Q Consensus      1491 ~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~--l~~~~~~~~~~~~~~~~d~~l~~ 1568 (1624)
                                +|++|       ++.++|||||||++|||+||+.||.........  .........+. .          
T Consensus       174 ----------~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~-~----------  225 (286)
T 3uqc_A          174 ----------ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIE-P----------  225 (286)
T ss_dssp             ----------CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCC-H----------
T ss_pred             ----------cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCC-h----------
Confidence                      34443       689999999999999999999999764322110  00000110000 0          


Q ss_pred             CchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHH
Q 047591         1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616 (1624)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~L~~i~~~ 1616 (1624)
                            ......++..+.+++.+||+.||++| |+.|+++.|+++...
T Consensus       226 ------~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          226 ------ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             ------HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             ------hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence                  01112345668899999999999999 999999999987643


No 362
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=6.7e-33  Score=332.87  Aligned_cols=200  Identities=26%  Similarity=0.410  Sum_probs=169.1

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCC-------
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHG-------  813 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-------  813 (1624)
                      .++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||+++++|.+..       
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            456888899999999999999975 79999999997543 335578999999999999999999999885433       


Q ss_pred             --------------------------------------------------eEEEEEEecCCCCHHHHHHhcCC--CCCHH
Q 047591          814 --------------------------------------------------FKALILEYMPQGSLEKWLYSHKY--TLNIQ  841 (1624)
Q Consensus       814 --------------------------------------------------~~~lV~Ey~~~gsL~~~l~~~~~--~l~~~  841 (1624)
                                                                        ..++||||+++|+|.+++.....  ..++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                              37999999999999999986542  35666


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC-----------ccccccccccc
Q 047591          842 QRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS-----------VTQTMTLATFG  910 (1624)
Q Consensus       842 ~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~-----------~~~~~~~gt~~  910 (1624)
                      .+..|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......           .......||+.
T Consensus       165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL  241 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred             HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence            7899999999999999984   599999999999999999999999999998765421           11233469999


Q ss_pred             ccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCC
Q 047591          911 YMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPT  945 (1624)
Q Consensus       911 Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~  945 (1624)
                      |+|||++....++.++|||||||++|||+||..|+
T Consensus       242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~  276 (332)
T 3qd2_B          242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ  276 (332)
T ss_dssp             GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence            99999998888999999999999999999998774


No 363
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=6.6e-33  Score=329.60  Aligned_cols=196  Identities=32%  Similarity=0.488  Sum_probs=165.1

Q ss_pred             CCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEecC
Q 047591          744 DGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMP  823 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~  823 (1624)
                      ++|...+.||+|+||+||+|+.. ++.||||++...  ...+.|.+|++++++++||||+++++++.+.  .++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTT--TEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--cEEEEEcCC
Confidence            45777899999999999999875 789999998643  3457899999999999999999999998854  799999999


Q ss_pred             CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCc-eEEEeeeeeeccCCCCCc
Q 047591          824 QGSLEKWLYSHKY--TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV-AHLSDFGISKLLDGEDSV  900 (1624)
Q Consensus       824 ~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~-~kl~DFGla~~~~~~~~~  900 (1624)
                      +|+|.+++.....  .+++..++.++.|+++||+|||+.++.+|+||||||+||+++.++. +||+|||+++.....   
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---  159 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---  159 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence            9999999986543  4688899999999999999999976567999999999999998886 799999999865432   


Q ss_pred             ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       901 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                       .....||+.|+|||++....++.++|||||||++|||+||+.||...
T Consensus       160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  206 (307)
T 2eva_A          160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI  206 (307)
T ss_dssp             ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred             -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence             12346999999999998889999999999999999999999999754


No 364
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=3.5e-33  Score=353.75  Aligned_cols=202  Identities=26%  Similarity=0.470  Sum_probs=177.6

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      .++|...+.||+|+||+||+|.+. ++..||||+++... ...+.|.+|+++|++++|||||+++++|.+.+..|+||||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~  297 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF  297 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence            355777899999999999999976 48899999997543 2457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCc
Q 047591          822 MPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV  900 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~  900 (1624)
                      |++|+|.++++... ..+++..+..|+.||++||+|||+.   +|+||||||+|||+++++.+||+|||+++........
T Consensus       298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  374 (495)
T 1opk_A          298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT  374 (495)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred             cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence            99999999998643 4689999999999999999999994   5999999999999999999999999999987554333


Q ss_pred             ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       901 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ......+|+.|+|||++..+.++.++|||||||++|||+| |+.||...
T Consensus       375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~  423 (495)
T 1opk_A          375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI  423 (495)
T ss_dssp             CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence            3333457789999999988889999999999999999999 99998754


No 365
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=8.6e-33  Score=330.18  Aligned_cols=200  Identities=25%  Similarity=0.402  Sum_probs=160.4

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      .++|...+.||+|+||+||+|... +|+.||||++..... ...+.+.+|++++++++|||||++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            357888899999999999999864 689999999975432 344678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccC
Q 047591          821 YMPQGSLEKWLYSHK-----YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD  895 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~  895 (1624)
                      |++ |+|.+++....     ..+++..+..++.|+++||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 69999987542     3588999999999999999999984   59999999999999999999999999998765


Q ss_pred             CCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          896 GEDSVTQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       896 ~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus       160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  211 (317)
T 2pmi_A          160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPG  211 (317)
T ss_dssp             SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            3322 2233468999999998865 4689999999999999999999999865


No 366
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=8.1e-33  Score=330.72  Aligned_cols=200  Identities=26%  Similarity=0.405  Sum_probs=173.1

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCC--eEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHG--FKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~  819 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++....  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            56888899999999999999875 58999999997543 234577889999999999999999999987655  789999


Q ss_pred             EecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee----CCCCceEEEeeeeeec
Q 047591          820 EYMPQGSLEKWLYSHKY--TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL----DDDTVAHLSDFGISKL  893 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl----d~~~~~kl~DFGla~~  893 (1624)
                      ||+++|+|.+++.....  .+++.++..|+.|++.||+|||+.   +|+||||||+|||+    +.++.+||+|||+|+.
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence            99999999999986542  389999999999999999999994   59999999999999    8888899999999998


Q ss_pred             cCCCCCcccccccccccccCccccC--------CCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          894 LDGEDSVTQTMTLATFGYMAPEYGS--------EGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       894 ~~~~~~~~~~~~~gt~~Y~aPE~~~--------~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ......  .....||+.|+|||++.        ...++.++|||||||++|||+||+.||...
T Consensus       166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  226 (319)
T 4euu_A          166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF  226 (319)
T ss_dssp             CCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred             cCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            755432  22346999999999865        567899999999999999999999999653


No 367
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=2e-33  Score=352.66  Aligned_cols=202  Identities=27%  Similarity=0.470  Sum_probs=175.7

Q ss_pred             hcCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      ..++|...+.||+|+||+||+|.+..+..||||+++... ...+.|.+|+.+|++++|||||++++++. .+..++||||
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~  263 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF  263 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred             chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence            346677889999999999999999888999999997543 34578999999999999999999999987 5568999999


Q ss_pred             cCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCc
Q 047591          822 MPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV  900 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~  900 (1624)
                      |++|+|.++++... ..+++.++.+++.|||.||+|||+.   +|+||||||+|||++.++.+||+|||+|+........
T Consensus       264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~  340 (454)
T 1qcf_A          264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  340 (454)
T ss_dssp             CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred             cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence            99999999997543 3688999999999999999999984   5999999999999999999999999999876543222


Q ss_pred             ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       901 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ......+|+.|+|||++..+.++.++|||||||++|||+| |+.||...
T Consensus       341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~  389 (454)
T 1qcf_A          341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM  389 (454)
T ss_dssp             TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC
Confidence            2233457889999999988889999999999999999999 99998753


No 368
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=8.4e-33  Score=339.17  Aligned_cols=202  Identities=28%  Similarity=0.480  Sum_probs=175.7

Q ss_pred             cCCCCCcceeecCCccceEEEEec--------CCCEEEEEEeecccc-hhHHHHHHHHHHHHhc-CCCceeeeeeeeccC
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP--------YGMNVAIKVFNLQLD-GAIKSFDAECEVLRRV-RHRNLVKIISSCSNH  812 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~--------~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~  812 (1624)
                      .++|...+.||+|+||+||+|+..        .+..||||++..... ...+.+.+|+++++++ +|||||+++++|.++
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            357888899999999999999852        246799999975533 3457799999999999 999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee
Q 047591          813 GFKALILEYMPQGSLEKWLYSHK---------------YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL  877 (1624)
Q Consensus       813 ~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl  877 (1624)
                      +..++||||+++|+|.+++....               ..+++.++..|+.|++.||+|||+.   +|+||||||+|||+
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll  224 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV  224 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred             CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence            99999999999999999998654               3489999999999999999999984   59999999999999


Q ss_pred             CCCCceEEEeeeeeeccCCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCc
Q 047591          878 DDDTVAHLSDFGISKLLDGEDS-VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDE  947 (1624)
Q Consensus       878 d~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~  947 (1624)
                      ++++.+||+|||+|+....... .......||+.|+|||++....++.++|||||||++|||+| |+.||..
T Consensus       225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~  296 (382)
T 3tt0_A          225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG  296 (382)
T ss_dssp             CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999987654332 22233467899999999988899999999999999999999 9999864


No 369
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=3.3e-33  Score=340.64  Aligned_cols=201  Identities=26%  Similarity=0.430  Sum_probs=172.1

Q ss_pred             CCCCCcceeecCCccceEEEEec------CCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP------YGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKA  816 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~  816 (1624)
                      ++|...+.||+|+||+||+|++.      +++.||||++.... ......+.+|+.++++++|||||++++++.+....+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            56778899999999999999843      46789999986443 334567899999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCC---ceEEEe
Q 047591          817 LILEYMPQGSLEKWLYSHK------YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT---VAHLSD  887 (1624)
Q Consensus       817 lV~Ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~---~~kl~D  887 (1624)
                      +||||+++|+|.+++....      ..+++.+++.|+.|+++||+|||+.   +|+||||||+|||++.++   .+||+|
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence            9999999999999998643      3589999999999999999999995   599999999999999554   599999


Q ss_pred             eeeeeccCCCC-CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCc
Q 047591          888 FGISKLLDGED-SVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDE  947 (1624)
Q Consensus       888 FGla~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~  947 (1624)
                      ||+|+...... ........||+.|+|||++....++.++|||||||++|||+| |+.||..
T Consensus       228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~  289 (367)
T 3l9p_A          228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS  289 (367)
T ss_dssp             CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99998653221 112233468999999999988889999999999999999998 9999865


No 370
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=6.3e-33  Score=335.77  Aligned_cols=200  Identities=26%  Similarity=0.357  Sum_probs=161.1

Q ss_pred             hhcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          741 RLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       741 ~~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      .+.++|...+.||+|+||+||+|+.. +++.||||++....  ..+.+.+|++++++++||||++++++|.+.+..++||
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  127 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL  127 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence            35678899999999999999999875 58899999997543  3356889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCC---CCceEEEeeeeeeccCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDG  896 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~---~~~~kl~DFGla~~~~~  896 (1624)
                      ||+++|+|.+++...+ .+++.++..++.|++.||+|||+.   +|+||||||+|||++.   ++.+||+|||+++....
T Consensus       128 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          128 ELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH  203 (349)
T ss_dssp             CCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred             EeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence            9999999999997654 689999999999999999999984   5999999999999975   88999999999987643


Q ss_pred             CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          897 EDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       897 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ..  ......||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus       204 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  253 (349)
T 2w4o_A          204 QV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDE  253 (349)
T ss_dssp             -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCT
T ss_pred             cc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence            32  223356999999999999888999999999999999999999998653


No 371
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=2.3e-33  Score=351.51  Aligned_cols=201  Identities=26%  Similarity=0.359  Sum_probs=166.5

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQ---LDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      .++|...+.||+|+||+||+|+. .+|+.||||++...   .......+.+|+.++++++||||++++++|.+.+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            46788899999999999999986 46899999999753   223446788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      ||||++|+|.+++.... .+++..+..|+.|+++||+|||+.  .+||||||||+|||++.++.+||+|||+|+......
T Consensus       227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred             EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence            99999999999997654 689999999999999999999972  249999999999999999999999999998654332


Q ss_pred             CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      . .....+||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       304 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  351 (446)
T 4ejn_A          304 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  351 (446)
T ss_dssp             ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             c-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence            2 22345799999999999888999999999999999999999999864


No 372
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.98  E-value=4.5e-33  Score=323.63  Aligned_cols=200  Identities=29%  Similarity=0.449  Sum_probs=177.2

Q ss_pred             CCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEecC
Q 047591          744 DGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMP  823 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~  823 (1624)
                      ++|...+.||+|+||.||+|...+++.||||++..... ..+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            46778899999999999999988889999999975433 34678999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCcccc
Q 047591          824 QGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT  903 (1624)
Q Consensus       824 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~  903 (1624)
                      +|+|.+++......+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++...........
T Consensus        87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  163 (267)
T 3t9t_A           87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  163 (267)
T ss_dssp             TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence            9999999987766789999999999999999999984   5999999999999999999999999999876543222223


Q ss_pred             cccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCc
Q 047591          904 MTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDE  947 (1624)
Q Consensus       904 ~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~  947 (1624)
                      ...+|+.|+|||......++.++||||||+++|||+| |+.||..
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  208 (267)
T 3t9t_A          164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN  208 (267)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC
Confidence            3457889999999888889999999999999999999 8999864


No 373
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98  E-value=5.5e-33  Score=331.03  Aligned_cols=251  Identities=28%  Similarity=0.462  Sum_probs=149.3

Q ss_pred             CccEEEeecccCCC--CCCCcccccCCCccEEEecC-CccCCcCcccccCCCCCcEEecCCccccccCcccccccccccE
Q 047591          316 NIEVIQLYGNHLSG--NLPSSTGINLPNLLRLYLWG-NNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQI  392 (1624)
Q Consensus       316 ~L~~L~Ls~N~l~g--~ip~~~~~~l~~L~~L~Ls~-N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~~~f~~l~~L~~  392 (1624)
                      +++.|+|++|+++|  .+|..+. ++++|++|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..|+++++|++
T Consensus        51 ~l~~L~L~~~~l~~~~~~~~~l~-~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~  129 (313)
T 1ogq_A           51 RVNNLDLSGLNLPKPYPIPSSLA-NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT  129 (313)
T ss_dssp             CEEEEEEECCCCSSCEECCGGGG-GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred             eEEEEECCCCCccCCcccChhHh-CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence            45555555555555  5555443 455555555553 5555555555555555555555555555555555555555555


Q ss_pred             EEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCCcccCCCCCCCcCCCCcccE
Q 047591          393 LNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIA  472 (1624)
Q Consensus       393 L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~n~l~g~ip~~~~~l~~L~~  472 (1624)
                      |+|++|++                                                        .+.+|..|+++++|++
T Consensus       130 L~Ls~N~l--------------------------------------------------------~~~~p~~~~~l~~L~~  153 (313)
T 1ogq_A          130 LDFSYNAL--------------------------------------------------------SGTLPPSISSLPNLVG  153 (313)
T ss_dssp             EECCSSEE--------------------------------------------------------ESCCCGGGGGCTTCCE
T ss_pred             EeCCCCcc--------------------------------------------------------CCcCChHHhcCCCCCe
Confidence            55444433                                                        2234445555566666


Q ss_pred             EeccCCccCCCccchhcccc-ccceecccccccccCCCccccCCCCCceeecccccccCCCccccccccCCccccccCcc
Q 047591          473 LSLYQNQLASTIPTTVGKLQ-NLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCLANLTSLRALNLSSNR  551 (1624)
Q Consensus       473 L~L~~N~l~g~iP~~~~~l~-~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~  551 (1624)
                      |+|++|+++|.+|..++.+. +|++|+|++|+++|.+|..+..++ |+.|+|++|++++.+|..|+.+++|+.|+|++|+
T Consensus       154 L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~  232 (313)
T 1ogq_A          154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS  232 (313)
T ss_dssp             EECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSE
T ss_pred             EECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCc
Confidence            66666666666666666665 666666666666666666666665 6666666666666666666666666666666666


Q ss_pred             ccccCchhhccccccceeecccccccCCCCcccccccccceeeccCCcCCCCccccccCCccccccccccCC-CCC
Q 047591          552 LNSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNG-FQG  626 (1624)
Q Consensus       552 l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~-l~g  626 (1624)
                      +++.+|. +..+.+|+.|||++|+++|.+|.+++.+++|+.|+|++|+++|.+|.. +++++|+.|++++|+ +.|
T Consensus       233 l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~  306 (313)
T 1ogq_A          233 LAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG  306 (313)
T ss_dssp             ECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred             eeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence            6655444 555666666666666666666666666666666666666666666654 556666666666665 443


No 374
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.98  E-value=4.8e-33  Score=333.91  Aligned_cols=201  Identities=28%  Similarity=0.441  Sum_probs=168.0

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCC----EEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGM----NVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      ++|+..+.||+|+||+||+|+.. +|+    +||+|.+.... ....+.|.+|+.++++++|||||+++++|.+.. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            46888899999999999999853 444    46888775433 234578999999999999999999999998765 789


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      ||||+++|+|.+++......+++..++.|+.|+++||+|||+.   +|+||||||+|||++.++.+||+|||+|+.....
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  170 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence            9999999999999988777899999999999999999999985   5999999999999999999999999999877544


Q ss_pred             CCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          898 DSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       898 ~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ... ......||+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  223 (327)
T 3poz_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI  223 (327)
T ss_dssp             CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC
Confidence            322 2223457889999999988899999999999999999999 99999753


No 375
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.98  E-value=7.8e-33  Score=327.49  Aligned_cols=199  Identities=28%  Similarity=0.405  Sum_probs=167.4

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccc--------------------------hhHHHHHHHHHHHH
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLD--------------------------GAIKSFDAECEVLR  795 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~--------------------------~~~~~~~~E~~~l~  795 (1624)
                      .++|...+.||+|+||+||+|+. .+|+.||||++.....                          ...+.+.+|+++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            46788899999999999999986 4689999999864321                          12356899999999


Q ss_pred             hcCCCceeeeeeeecc--CCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCC
Q 047591          796 RVRHRNLVKIISSCSN--HGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPS  873 (1624)
Q Consensus       796 ~l~H~niv~l~~~~~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~  873 (1624)
                      +++||||+++++++.+  .+..|+||||+++|+|.+++.  ...+++.++..++.|+++||+|||+.   +|+||||||+
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~  166 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPS  166 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence            9999999999999986  568899999999999988653  34689999999999999999999995   5999999999


Q ss_pred             CeeeCCCCceEEEeeeeeeccCCCCCcccccccccccccCccccCCCC---CCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          874 NVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGI---VSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       874 NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      |||++.++.+||+|||+++........ .....||+.|+|||.+....   ++.++|||||||++|||+||+.||..
T Consensus       167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  242 (298)
T 2zv2_A          167 NLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD  242 (298)
T ss_dssp             GEEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             HEEECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            999999999999999999877544322 23357999999999986654   47889999999999999999999864


No 376
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.98  E-value=1.3e-32  Score=344.64  Aligned_cols=197  Identities=33%  Similarity=0.485  Sum_probs=171.3

Q ss_pred             cCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCC-eEEEEEEe
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHG-FKALILEY  821 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lV~Ey  821 (1624)
                      .++|...+.||+|+||+||+|.+. |+.||||+++...  ..+.|.+|+++|++++|||||+++++|.+.+ ..|+||||
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~  268 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY  268 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence            456778899999999999999875 7899999997543  4578999999999999999999999987654 78999999


Q ss_pred             cCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCc
Q 047591          822 MPQGSLEKWLYSHKY-TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV  900 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~  900 (1624)
                      |++|+|.++++.... .+++..+..++.|+++||+|||+.   +|+||||||+|||+++++.+||+|||+++.....   
T Consensus       269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---  342 (450)
T 1k9a_A          269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---  342 (450)
T ss_dssp             CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence            999999999987654 378999999999999999999994   5999999999999999999999999999865322   


Q ss_pred             ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCccC
Q 047591          901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEMF  949 (1624)
Q Consensus       901 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~~  949 (1624)
                       .....+|+.|+|||.+....++.++|||||||++|||+| |+.||....
T Consensus       343 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~  391 (450)
T 1k9a_A          343 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP  391 (450)
T ss_dssp             -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC
T ss_pred             -ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence             122357889999999988899999999999999999999 999997643


No 377
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.98  E-value=2.2e-33  Score=334.45  Aligned_cols=202  Identities=22%  Similarity=0.421  Sum_probs=167.5

Q ss_pred             hcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccc---hhHHHHHHHHHHHHhcCCCceeeeeeeeccCC----
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLD---GAIKSFDAECEVLRRVRHRNLVKIISSCSNHG----  813 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----  813 (1624)
                      ..++|...+.||+|+||+||+|+. .+++.||||++.....   ...+.|.+|++++++++||||+++++++....    
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~   89 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   89 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence            346788999999999999999986 5789999999975432   33467899999999999999999999987554    


Q ss_pred             eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeec
Q 047591          814 FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKL  893 (1624)
Q Consensus       814 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~  893 (1624)
                      ..|+||||+++|+|.++++... .+++.++..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~  165 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA  165 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred             ccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence            3499999999999999997654 689999999999999999999984   599999999999999999999999999987


Q ss_pred             cCCCCCc--ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          894 LDGEDSV--TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       894 ~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .......  ......||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~  221 (311)
T 3ork_A          166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG  221 (311)
T ss_dssp             ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            6543221  12234699999999999888899999999999999999999999865


No 378
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.98  E-value=6.3e-33  Score=325.32  Aligned_cols=202  Identities=25%  Similarity=0.402  Sum_probs=163.1

Q ss_pred             cCCCCCcceeecCCccceEEEEec----CCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP----YGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      .++|...+.||+|+||+||+|...    .+..||||++.... ....+.|.+|+.++++++||||+++++++.+ +..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-CccEE
Confidence            457888899999999999999864    24579999986543 2345679999999999999999999999854 56799


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      ||||+++|+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++.....
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS  169 (281)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred             EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCcc
Confidence            9999999999999987766799999999999999999999994   5999999999999999999999999999877554


Q ss_pred             CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       898 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      .........+|+.|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~  221 (281)
T 1mp8_A          170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV  221 (281)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcC
Confidence            3333334467889999999888889999999999999999997 99998754


No 379
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.98  E-value=5.6e-33  Score=335.46  Aligned_cols=206  Identities=26%  Similarity=0.424  Sum_probs=177.3

Q ss_pred             HHhhcCCCCCcceeecCCccceEEEEec------CCCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeeeeeecc
Q 047591          739 LQRLTDGFSESNLIGAGSFGSVYKATLP------YGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCSN  811 (1624)
Q Consensus       739 l~~~t~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~  811 (1624)
                      +....++|...+.||+|+||+||+|+..      +++.||||+++.... ...+.|.+|++++++++||||++++++|.+
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            3445678999999999999999999864      348899999975533 345679999999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeC
Q 047591          812 HGFKALILEYMPQGSLEKWLYSHK-----------------------YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC  868 (1624)
Q Consensus       812 ~~~~~lV~Ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHr  868 (1624)
                      .+..++||||+++|+|.+++....                       ..+++.+++.|+.|+++||+|||+.   +|+||
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~  198 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR  198 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred             CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence            999999999999999999998642                       4689999999999999999999984   59999


Q ss_pred             cCCCCCeeeCCCCceEEEeeeeeeccCCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCC
Q 047591          869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDS-VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTD  946 (1624)
Q Consensus       869 DlKp~NILld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~  946 (1624)
                      ||||+||++++++.+||+|||+++....... .......||+.|+|||++....++.++|||||||++|||+| |+.||.
T Consensus       199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  278 (343)
T 1luf_A          199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY  278 (343)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence            9999999999999999999999987643321 12233468999999999888889999999999999999999 999986


Q ss_pred             c
Q 047591          947 E  947 (1624)
Q Consensus       947 ~  947 (1624)
                      .
T Consensus       279 ~  279 (343)
T 1luf_A          279 G  279 (343)
T ss_dssp             T
T ss_pred             C
Confidence            5


No 380
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.98  E-value=2.3e-32  Score=327.56  Aligned_cols=192  Identities=23%  Similarity=0.371  Sum_probs=151.7

Q ss_pred             cceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcC-CCceeeeeeeeccCCeEEEEEEecCCCC
Q 047591          749 SNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVR-HRNLVKIISSCSNHGFKALILEYMPQGS  826 (1624)
Q Consensus       749 ~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~Ey~~~gs  826 (1624)
                      .+.||+|+||+||+|... +|+.||||++...   ....+.+|+.+++++. |||||++++++.++...|+||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            478999999999999874 6899999999743   3456789999999997 9999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCC---ceEEEeeeeeeccCCCCCcccc
Q 047591          827 LEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT---VAHLSDFGISKLLDGEDSVTQT  903 (1624)
Q Consensus       827 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~---~~kl~DFGla~~~~~~~~~~~~  903 (1624)
                      |.+++.... .+++.++..|+.|++.||+|||+.   +|+||||||+|||++.++   .+||+|||+++....... ...
T Consensus        93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~  167 (325)
T 3kn6_A           93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLK  167 (325)
T ss_dssp             HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred             HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-ccc
Confidence            999998754 689999999999999999999984   599999999999998765   899999999987654332 223


Q ss_pred             cccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          904 MTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       904 ~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ...||+.|+|||++....++.++|||||||++|||+||+.||...
T Consensus       168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  212 (325)
T 3kn6_A          168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH  212 (325)
T ss_dssp             ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence            346899999999999889999999999999999999999999753


No 381
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98  E-value=4.7e-33  Score=337.80  Aligned_cols=200  Identities=26%  Similarity=0.343  Sum_probs=172.8

Q ss_pred             CCCCCcceeecCCccceEEEEe----cCCCEEEEEEeeccc----chhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCe
Q 047591          744 DGFSESNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQL----DGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGF  814 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~----~~g~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~  814 (1624)
                      ++|...+.||+|+||+||+|+.    .+|+.||||+++...    ....+.+.+|+++++++ +||||+++++++...+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            5788889999999999999986    378999999986432    23345678899999999 69999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeecc
Q 047591          815 KALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL  894 (1624)
Q Consensus       815 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~  894 (1624)
                      .++||||+++|+|.+++.... .+++.++..++.|+++||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~  209 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF  209 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             EEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence            999999999999999997654 689999999999999999999984   5999999999999999999999999999876


Q ss_pred             CCCCCcccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          895 DGEDSVTQTMTLATFGYMAPEYGSE--GIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       895 ~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ............||+.|+|||++..  ..++.++|||||||++|||+||+.||..
T Consensus       210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~  264 (355)
T 1vzo_A          210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV  264 (355)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred             ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence            5443333444579999999999874  4578999999999999999999999864


No 382
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.98  E-value=1.5e-32  Score=334.19  Aligned_cols=209  Identities=26%  Similarity=0.336  Sum_probs=184.2

Q ss_pred             hccccCHHHHHhhcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcC-----CCcee
Q 047591          730 TWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVR-----HRNLV  803 (1624)
Q Consensus       730 ~~~~~~~~el~~~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv  803 (1624)
                      ....+++++.....++|...+.||+|+||+||+|+. .+++.||||++... ....+.+.+|++++++++     |||||
T Consensus        21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv   99 (360)
T 3llt_A           21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIV   99 (360)
T ss_dssp             GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred             cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence            456778888888899999999999999999999986 46899999998743 234466788999999996     99999


Q ss_pred             eeeeeeccCCeEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCC---
Q 047591          804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---  879 (1624)
Q Consensus       804 ~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~---  879 (1624)
                      ++++++...+..++||||+ +++|.+++.... ..+++.++..|+.|++.||+|||+.   +|+||||||+|||++.   
T Consensus       100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~  175 (360)
T 3llt_A          100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF  175 (360)
T ss_dssp             CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred             cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence            9999999999999999999 899999998654 3589999999999999999999984   5999999999999986   


Q ss_pred             ----------------------CCceEEEeeeeeeccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHH
Q 047591          880 ----------------------DTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIE  937 (1624)
Q Consensus       880 ----------------------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~e  937 (1624)
                                            ++.+||+|||+|+.....    .....||+.|+|||++.+..++.++|||||||++||
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  251 (360)
T 3llt_A          176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE  251 (360)
T ss_dssp             CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             cccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence                                  788999999999875432    223469999999999998899999999999999999


Q ss_pred             HHcCCCCCCc
Q 047591          938 TFTRKMPTDE  947 (1624)
Q Consensus       938 lltg~~P~~~  947 (1624)
                      |+||+.||..
T Consensus       252 ll~g~~pf~~  261 (360)
T 3llt_A          252 LYTGSLLFRT  261 (360)
T ss_dssp             HHHSSCSCCC
T ss_pred             HHHCCCCCCC
Confidence            9999999965


No 383
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.98  E-value=1.7e-32  Score=343.57  Aligned_cols=199  Identities=26%  Similarity=0.437  Sum_probs=175.6

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..|+|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            367888899999999999999875 79999999997542   22346789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++|+|.+++... ..+++.++..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus        95 ~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~  170 (476)
T 2y94_A           95 MEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE  170 (476)
T ss_dssp             EECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred             EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence            9999999999999754 4689999999999999999999984   59999999999999999999999999999875432


Q ss_pred             CcccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .  ....+||+.|+|||++.+..+ +.++||||+||++|||+||+.||+.
T Consensus       171 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  218 (476)
T 2y94_A          171 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD  218 (476)
T ss_dssp             C--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             c--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC
Confidence            2  233579999999999877665 7899999999999999999999975


No 384
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.98  E-value=1.1e-32  Score=333.48  Aligned_cols=195  Identities=31%  Similarity=0.389  Sum_probs=172.3

Q ss_pred             CCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      +.|...+.||+|+||+||+|+. .+|+.||||++....   ....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4577889999999999999985 578999999997543   223467899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||++ |+|.+++......+++.++..++.|+++||+|||+.   +|+||||||+|||+++++.+||+|||+++.....  
T Consensus       134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--  207 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--  207 (348)
T ss_dssp             ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred             ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence            9998 689998876666899999999999999999999995   5999999999999999999999999999876432  


Q ss_pred             cccccccccccccCcccc---CCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYG---SEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~---~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                         ....||+.|+|||++   ..+.++.++|||||||++|||+||+.||..
T Consensus       208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  255 (348)
T 1u5q_A          208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  255 (348)
T ss_dssp             ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence               234699999999987   357789999999999999999999999864


No 385
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.98  E-value=1.6e-32  Score=333.73  Aligned_cols=199  Identities=24%  Similarity=0.286  Sum_probs=164.6

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      .++|...+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++++++|||||++++++.+.+..++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            467888999999999999999875 789999999975432 336788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCc--eEEEeeeeeeccCCCCC
Q 047591          822 MPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV--AHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~--~kl~DFGla~~~~~~~~  899 (1624)
                      +++|+|.+++...+ .+++..+..++.|+++||+|||+.   +|+||||||+|||++.++.  +||+|||+|+...... 
T Consensus        98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~-  172 (361)
T 3uc3_A           98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-  172 (361)
T ss_dssp             CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred             CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence            99999999997654 689999999999999999999984   5999999999999987765  9999999998543222 


Q ss_pred             cccccccccccccCccccCCCCCCcc-hhHHHHHHHHHHHHcCCCCCCcc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIVSTC-GDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~~~k-~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                       ......||+.|+|||++.+..++.+ +|||||||++|||+||+.||...
T Consensus       173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  221 (361)
T 3uc3_A          173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDP  221 (361)
T ss_dssp             ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--
T ss_pred             -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCC
Confidence             1233469999999999877777655 89999999999999999999753


No 386
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.98  E-value=5.8e-33  Score=335.53  Aligned_cols=200  Identities=23%  Similarity=0.392  Sum_probs=167.7

Q ss_pred             cCCCCCcceeecCCccceEEEEecCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCC--CceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRH--RNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lV  818 (1624)
                      .+.|+..+.||+|+||+||+|...+++.||||++....  ....+.+.+|++++++++|  |||+++++++.+++..|+|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            35688889999999999999998889999999987543  2345779999999999987  9999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      || +.+|+|.+++.... .+++.++..|+.|+++||+|||+.   +|+||||||+|||++ ++.+||+|||+|+......
T Consensus        88 ~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~  161 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  161 (343)
T ss_dssp             EC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred             Ee-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence            99 56789999998754 689999999999999999999984   599999999999997 5789999999998775433


Q ss_pred             Cc-ccccccccccccCccccCC-----------CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          899 SV-TQTMTLATFGYMAPEYGSE-----------GIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       899 ~~-~~~~~~gt~~Y~aPE~~~~-----------~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      .. ......||+.|+|||++..           ..++.++|||||||++|||+||+.||...
T Consensus       162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  223 (343)
T 3dbq_A          162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI  223 (343)
T ss_dssp             --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhh
Confidence            22 2234579999999998753           67899999999999999999999999753


No 387
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.98  E-value=2.8e-32  Score=335.59  Aligned_cols=203  Identities=21%  Similarity=0.283  Sum_probs=175.8

Q ss_pred             cCCCCCcceeecC--CccceEEEEec-CCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEE
Q 047591          743 TDGFSESNLIGAG--SFGSVYKATLP-YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       743 t~~f~~~~~iG~G--~~G~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      .++|+..+.||+|  +||+||+|+.. +|+.||||++....  ....+.+.+|+.++++++|||||++++++.+++..|+
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3568888999999  99999999875 69999999997653  2345678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCC
Q 047591          818 ILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG  896 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~  896 (1624)
                      |||||++|+|.+++.... ..+++..+..|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||.+.....
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~  180 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS  180 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred             EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence            999999999999997652 4689999999999999999999984   599999999999999999999999998865432


Q ss_pred             CCC------cccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          897 EDS------VTQTMTLATFGYMAPEYGSE--GIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       897 ~~~------~~~~~~~gt~~Y~aPE~~~~--~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ...      .......||+.|+|||++..  ..++.++|||||||++|||+||+.||...
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  240 (389)
T 3gni_B          181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM  240 (389)
T ss_dssp             TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence            111      11123468999999999876  67899999999999999999999999754


No 388
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.98  E-value=1.4e-32  Score=326.83  Aligned_cols=200  Identities=29%  Similarity=0.460  Sum_probs=168.3

Q ss_pred             cCCCCCcceeecCCccceEEEEecCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      .++|...+.||+|+||+||+|...  ..+|||+++...  ....+.|.+|++++++++||||+++++++.. +..++|||
T Consensus        35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e  111 (307)
T 3lb7_A           35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ  111 (307)
T ss_dssp             TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEe
Confidence            357888899999999999999864  468999887533  2345789999999999999999999998765 45799999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC-CC
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE-DS  899 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~-~~  899 (1624)
                      |+++|+|.+++......+++.++..|+.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+|+..... ..
T Consensus       112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~  188 (307)
T 3lb7_A          112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS  188 (307)
T ss_dssp             CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred             cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence            9999999999987777899999999999999999999995   5999999999999999999999999999865432 12


Q ss_pred             cccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          900 VTQTMTLATFGYMAPEYGS---EGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~---~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      .......||+.|+|||++.   ...++.++|||||||++|||+||+.||...
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~  240 (307)
T 3lb7_A          189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI  240 (307)
T ss_dssp             -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccC
Confidence            2223457999999999874   667899999999999999999999999754


No 389
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.98  E-value=2e-32  Score=320.36  Aligned_cols=201  Identities=24%  Similarity=0.452  Sum_probs=157.9

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      .++|...+.||+|+||.||+|+. .+|+.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            46788899999999999999986 579999999997542   22346789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++|+|.+++......+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++......
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  166 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH  166 (278)
T ss_dssp             EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence            999999999999987766799999999999999999999984   59999999999999999999999999998765332


Q ss_pred             CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .. .....||+.|+|||......++.++|||||||++|||+||+.||..
T Consensus       167 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  214 (278)
T 3cok_A          167 EK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT  214 (278)
T ss_dssp             --------------------------CTHHHHHHHHHHHHHHSSCSSCC
T ss_pred             Cc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            21 2234689999999999888899999999999999999999999865


No 390
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.98  E-value=2.1e-32  Score=320.89  Aligned_cols=202  Identities=25%  Similarity=0.417  Sum_probs=171.1

Q ss_pred             cCCCCCcceeecCCccceEEEEecC----CCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLPY----GMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      .++|...+.||+|+||+||+|+...    +..||||++.... ....+.|.+|+.++++++||||+++++++.++ ..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence            4678888999999999999998542    3469999987553 23457899999999999999999999998764 4689


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      ||||+++|+|.+++......+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++.....
T Consensus        90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  166 (281)
T 3cc6_A           90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE  166 (281)
T ss_dssp             EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred             EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence            9999999999999987766799999999999999999999984   5999999999999999999999999999876554


Q ss_pred             CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       898 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      .........+|+.|+|||......++.++|||||||++|||+| |+.||...
T Consensus       167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~  218 (281)
T 3cc6_A          167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL  218 (281)
T ss_dssp             ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccC
Confidence            3333344567889999999888889999999999999999999 99998643


No 391
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.98  E-value=2.3e-32  Score=357.65  Aligned_cols=200  Identities=23%  Similarity=0.292  Sum_probs=176.7

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCeEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l  817 (1624)
                      .++|...+.||+|+||+||+|+.. +++.||||+++...   ....+.+.+|..++..+ +||||+++++++.+.+..|+
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            467889999999999999999864 68899999997532   23456788999999987 79999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      ||||+++|+|.++++..+ .+++.++..|+.||+.||+|||+.   +||||||||+|||+|.++.+||+|||+|+.....
T Consensus       420 V~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~  495 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD  495 (674)
T ss_dssp             EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred             EEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence            999999999999998654 689999999999999999999994   5999999999999999999999999999865433


Q ss_pred             CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       898 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .. .....+||+.|||||++....++.++|||||||++|||+||+.||..
T Consensus       496 ~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~  544 (674)
T 3pfq_A          496 GV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG  544 (674)
T ss_dssp             TC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             Cc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC
Confidence            22 23345799999999999999999999999999999999999999965


No 392
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.98  E-value=4.3e-32  Score=319.15  Aligned_cols=200  Identities=29%  Similarity=0.461  Sum_probs=172.0

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccch-------hHHHHHHHHHHHHhcCCCceeeeeeeeccCCe
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDG-------AIKSFDAECEVLRRVRHRNLVKIISSCSNHGF  814 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~  814 (1624)
                      .++|...+.||+|+||+||+|+. .+++.||||++......       ..+.+.+|++++++++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            36788889999999999999986 47899999998654321       1267899999999999999999999997765 


Q ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCc-----eEEEeee
Q 047591          815 KALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV-----AHLSDFG  889 (1624)
Q Consensus       815 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~-----~kl~DFG  889 (1624)
                       ++||||+++|+|.+++......+++..+..++.|++.||+|||+.+ .+|+||||||+||+++.++.     +||+|||
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg  174 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG  174 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred             -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence             6999999999999999877778999999999999999999999853 34999999999999988776     9999999


Q ss_pred             eeeccCCCCCcccccccccccccCcccc--CCCCCCcchhHHHHHHHHHHHHcCCCCCCccC
Q 047591          890 ISKLLDGEDSVTQTMTLATFGYMAPEYG--SEGIVSTCGDVYSFGILMIETFTRKMPTDEMF  949 (1624)
Q Consensus       890 la~~~~~~~~~~~~~~~gt~~Y~aPE~~--~~~~~~~k~DvwS~Gvil~elltg~~P~~~~~  949 (1624)
                      +++.....    .....||+.|+|||++  ....++.++|||||||++|||+||+.||....
T Consensus       175 ~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  232 (287)
T 4f0f_A          175 LSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS  232 (287)
T ss_dssp             TCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             cccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence            99854332    2335699999999987  45567899999999999999999999997643


No 393
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.98  E-value=2.9e-32  Score=318.78  Aligned_cols=200  Identities=24%  Similarity=0.343  Sum_probs=176.4

Q ss_pred             hcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      ..++|...+.||+|+||+||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            3467888899999999999999865 578999999986655566789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee---CCCCceEEEeeeeeeccCCC
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl---d~~~~~kl~DFGla~~~~~~  897 (1624)
                      |+++++|.+++.... .+++.++..++.|++.||+|||+.   +|+||||||+||++   +.++.+||+|||+++.....
T Consensus        87 ~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~  162 (277)
T 3f3z_A           87 LCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG  162 (277)
T ss_dssp             CCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred             ccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence            999999999987654 689999999999999999999984   59999999999999   78899999999999876543


Q ss_pred             CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       898 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ..  .....||+.|+|||.+.+ .++.++||||||+++|||+||+.||...
T Consensus       163 ~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~  210 (277)
T 3f3z_A          163 KM--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAP  210 (277)
T ss_dssp             SC--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cc--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCC
Confidence            32  233469999999998765 4899999999999999999999998653


No 394
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.98  E-value=1.3e-32  Score=329.98  Aligned_cols=201  Identities=25%  Similarity=0.409  Sum_probs=169.7

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCC----EEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGM----NVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      ++|...+.||+|+||+||+|+.. +++    +||+|.+.... ....+.+.+|+.++++++||||++++++|.+ +..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccEE
Confidence            46778899999999999999864 444    37888775432 2334567889999999999999999999874 56899


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      ||||+++|+|.+++......+++..+..|+.|+++||+|||+.   +|+||||||+|||++.++.+||+|||+|+.....
T Consensus        92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  168 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD  168 (325)
T ss_dssp             EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred             EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence            9999999999999987666799999999999999999999995   5999999999999999999999999999987544


Q ss_pred             CCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          898 DSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       898 ~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ... ......||+.|+|||++..+.++.++|||||||++|||+| |+.||...
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  221 (325)
T 3kex_A          169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL  221 (325)
T ss_dssp             TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred             cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcccc
Confidence            322 2234568889999999988889999999999999999999 99999754


No 395
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.98  E-value=2.6e-32  Score=335.67  Aligned_cols=201  Identities=23%  Similarity=0.321  Sum_probs=162.5

Q ss_pred             hhcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecc--cchhHHHHHHHHHHHHhcC-CCceeeeeeeeccC--Ce
Q 047591          741 RLTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQ--LDGAIKSFDAECEVLRRVR-HRNLVKIISSCSNH--GF  814 (1624)
Q Consensus       741 ~~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~--~~  814 (1624)
                      ...++|...+.||+|+||+||+|.. .+|+.||||++...  .....+.+.+|+.+++++. |||||++++++...  ..
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            3457899999999999999999985 47899999998543  2334567889999999997 99999999998654  36


Q ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeecc
Q 047591          815 KALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL  894 (1624)
Q Consensus       815 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~  894 (1624)
                      .|+|||||+ |+|.++++..  .+++..+..++.|+++||+|||+.   +|+||||||+|||++.++.+||+|||+|+..
T Consensus        86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF  159 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred             EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence            899999998 6999999763  688999999999999999999985   5999999999999999999999999999876


Q ss_pred             CCCC--------------------CcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          895 DGED--------------------SVTQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       895 ~~~~--------------------~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ....                    ....+..+||+.|+|||++.+ ..++.++||||+||++|||+||+.||..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  233 (388)
T 3oz6_A          160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG  233 (388)
T ss_dssp             SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence            4311                    111233579999999998865 6789999999999999999999999864


No 396
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.98  E-value=6.9e-33  Score=347.34  Aligned_cols=201  Identities=28%  Similarity=0.472  Sum_probs=168.9

Q ss_pred             cCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEec
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYM  822 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~  822 (1624)
                      .++|...+.||+|+||+||+|.+..+..||||+++.... ..+.|.+|+++|++++|||||++++++.+ +..++|||||
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~  260 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM  260 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence            356777889999999999999998888899999975432 34689999999999999999999999976 6689999999


Q ss_pred             CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCcc
Q 047591          823 PQGSLEKWLYSH-KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT  901 (1624)
Q Consensus       823 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~  901 (1624)
                      ++|+|.++++.. ...+++.++..++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+++.........
T Consensus       261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  337 (452)
T 1fmk_A          261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  337 (452)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence            999999999753 34589999999999999999999984   59999999999999999999999999998765433322


Q ss_pred             cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          902 QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       902 ~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      .....+|+.|+|||++..+.++.++|||||||++|||+| |+.||...
T Consensus       338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~  385 (452)
T 1fmk_A          338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM  385 (452)
T ss_dssp             -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence            333457889999999888889999999999999999999 99998654


No 397
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.98  E-value=1.3e-32  Score=331.20  Aligned_cols=200  Identities=25%  Similarity=0.369  Sum_probs=174.7

Q ss_pred             hcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccc--------hhHHHHHHHHHHHHhcCCCceeeeeeeeccC
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLD--------GAIKSFDAECEVLRRVRHRNLVKIISSCSNH  812 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~  812 (1624)
                      ..++|...+.||+|+||+||+|+. .+|+.||||++.....        ...+.+.+|++++++++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            356788999999999999999985 5689999999875421        1334677899999999999999999999999


Q ss_pred             CeEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeee
Q 047591          813 GFKALILEYMPQG-SLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGIS  891 (1624)
Q Consensus       813 ~~~~lV~Ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla  891 (1624)
                      +..++||||+.+| +|.+++.... .+++..+..|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a  177 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSA  177 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccc
Confidence            9999999999877 9999997654 689999999999999999999994   5999999999999999999999999999


Q ss_pred             eccCCCCCcccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          892 KLLDGEDSVTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       892 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      +.......  .....||+.|+|||++....+ +.++|||||||++|||++|+.||..
T Consensus       178 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  232 (335)
T 3dls_A          178 AYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE  232 (335)
T ss_dssp             EECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred             eECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence            87754332  223569999999999877766 8899999999999999999999864


No 398
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.98  E-value=1.2e-32  Score=338.36  Aligned_cols=199  Identities=23%  Similarity=0.390  Sum_probs=168.0

Q ss_pred             CCCCCcceeecCCccceEEEEecCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcC--CCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVR--HRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      +.|...+.||+|+||+||+|...+++.||||++....  ....+.+.+|++++++++  |||||++++++...+..|+||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            3588889999999999999998889999999997543  234578999999999996  599999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      | +.+|+|.+++.... .+++.++..|+.||+.||+|||+.   +|+||||||+|||++ ++.+||+|||+|+.......
T Consensus       136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~  209 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT  209 (390)
T ss_dssp             E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred             e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence            9 56889999998754 788889999999999999999984   599999999999996 57899999999987754332


Q ss_pred             c-ccccccccccccCccccCC-----------CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          900 V-TQTMTLATFGYMAPEYGSE-----------GIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       900 ~-~~~~~~gt~~Y~aPE~~~~-----------~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      . .....+||+.|+|||++..           ..++.++|||||||++|||+||+.||...
T Consensus       210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~  270 (390)
T 2zmd_A          210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI  270 (390)
T ss_dssp             ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhh
Confidence            2 2234579999999998753           46899999999999999999999999653


No 399
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.98  E-value=3.3e-32  Score=322.28  Aligned_cols=229  Identities=21%  Similarity=0.291  Sum_probs=177.2

Q ss_pred             CCCcC-CeEeecCceEEEEEEEc-CCceEEEEEeccchhhHHHHHHHHHHHH-HhcCCCceeEEEeeecc----CCeeEE
Q 047591         1336 GFSES-NLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVM-RRIRHRNLAKIVSSCSN----PGFKAL 1408 (1624)
Q Consensus      1336 ~f~~~-~~lG~G~~G~Vyk~~~~-~~~~vAvK~~~~~~~~~~~~f~~E~~~l-~~l~HpNIv~l~g~~~~----~~~~~l 1408 (1624)
                      +|... ++||+|+||+||+|... +++.||||+++..     ..+.+|++++ +..+||||+++++++..    ....++
T Consensus        18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l   92 (299)
T 3m2w_A           18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI   92 (299)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence            34444 67999999999999874 6889999998632     4567888888 56699999999999876    667899


Q ss_pred             EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceEEcCCCCCcEEecC---CCcEEEeeecceee
Q 047591         1409 ILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKL 1484 (1624)
Q Consensus      1409 V~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~---~~~~kl~DFGla~~ 1484 (1624)
                      ||||+++|+|.+++.... ..+++.++..++.|++.||+|||+   .+|+||||||+||+++.   ++.+||+|||+|+.
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  169 (299)
T 3m2w_A           93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  169 (299)
T ss_dssp             EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence            999999999999998754 468999999999999999999996   79999999999999998   78999999999875


Q ss_pred             cCCCCCccccccccccccccccccCCCCcCcccchHHHHHHHHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhh
Q 047591         1485 LDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDA 1564 (1624)
Q Consensus      1485 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DV~SfGvil~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 1564 (1624)
                      ..                       +..++.++|||||||++|||+||+.||.........  ......           
T Consensus       170 ~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~--~~~~~~-----------  213 (299)
T 3m2w_A          170 TT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--PGMKTR-----------  213 (299)
T ss_dssp             CT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------CCSCCS-----------
T ss_pred             cc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh--HHHHHH-----------
Confidence            43                       134688999999999999999999999653211100  000000           


Q ss_pred             hccCCchHHHHHHHHHhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047591         1565 NLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609 (1624)
Q Consensus      1565 ~l~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~evl~~ 1609 (1624)
                       ...............++..+.+++.+||+.||++|||+.|+++.
T Consensus       214 -~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          214 -IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             -SCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             -HhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence             00000000011123456678899999999999999999999873


No 400
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.98  E-value=3.7e-32  Score=321.35  Aligned_cols=200  Identities=17%  Similarity=0.219  Sum_probs=176.0

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCeEEEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      .++|...+.||+|+||+||+|+. .+|+.||||++....  ..+.+.+|+.+++++ +|+|++++++++.+....++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            46788999999999999999985 578999999986443  234678999999999 79999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCc-----eEEEeeeeeeccC
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV-----AHLSDFGISKLLD  895 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~-----~kl~DFGla~~~~  895 (1624)
                      |+ +|+|.+++......+++.++..|+.|+++||+|||+.   +|+||||||+||+++.++.     +||+|||+++...
T Consensus        87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~  162 (298)
T 1csn_A           87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  162 (298)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence            99 9999999987766799999999999999999999984   5999999999999987776     9999999998775


Q ss_pred             CCCCc------ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          896 GEDSV------TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       896 ~~~~~------~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      .....      ......||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus       163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  221 (298)
T 1csn_A          163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  221 (298)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchh
Confidence            43321      123456999999999998888999999999999999999999999764


No 401
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98  E-value=1.9e-32  Score=331.15  Aligned_cols=204  Identities=27%  Similarity=0.476  Sum_probs=174.4

Q ss_pred             hcCCCCCcceeecCCccceEEEEe------cCCCEEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCceeeeeeeeccCC
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATL------PYGMNVAIKVFNLQL-DGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHG  813 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~  813 (1624)
                      ..++|...+.||+|+||+||+|+.      .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            346788899999999999999985      245689999997543 23457899999999999 8999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHhcCC----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCC
Q 047591          814 FKALILEYMPQGSLEKWLYSHKY----------------------TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLK  871 (1624)
Q Consensus       814 ~~~lV~Ey~~~gsL~~~l~~~~~----------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlK  871 (1624)
                      ..++||||+++|+|.+++.....                      .+++.++..++.|++.||+|||+.   +|+|||||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence            99999999999999999986542                      378999999999999999999994   59999999


Q ss_pred             CCCeeeCCCCceEEEeeeeeeccCCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          872 PSNVLLDDDTVAHLSDFGISKLLDGEDSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       872 p~NILld~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      |+||+++.++.+||+|||+++........ ......||+.|+|||.+..+.++.++|||||||++|||+| |+.||...
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  278 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI  278 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence            99999999999999999999876543322 2233468899999999888889999999999999999998 99998754


No 402
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.98  E-value=3.1e-32  Score=335.73  Aligned_cols=195  Identities=22%  Similarity=0.327  Sum_probs=161.5

Q ss_pred             CCCCCc-ceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHH-hcCCCceeeeeeeecc----CCeEE
Q 047591          744 DGFSES-NLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLR-RVRHRNLVKIISSCSN----HGFKA  816 (1624)
Q Consensus       744 ~~f~~~-~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~----~~~~~  816 (1624)
                      ++|... +.||+|+||+||+|... +|+.||||++...     ..+.+|++++. ..+||||+++++++..    ....|
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            456554 68999999999999864 6899999998632     45678998874 4589999999998865    56789


Q ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCC---CCceEEEeeeeee
Q 047591          817 LILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISK  892 (1624)
Q Consensus       817 lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~---~~~~kl~DFGla~  892 (1624)
                      +|||||++|+|.+++.... ..+++.++..|+.||+.||+|||+.   +|+||||||+|||++.   ++.+||+|||+++
T Consensus       136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~  212 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  212 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEeccccc
Confidence            9999999999999998654 3689999999999999999999984   5999999999999998   7899999999998


Q ss_pred             ccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          893 LLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       893 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ......  .....+||+.|+|||++....++.++|||||||++|||+||+.||...
T Consensus       213 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  266 (400)
T 1nxk_A          213 ETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN  266 (400)
T ss_dssp             ECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred             ccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence            765332  223457999999999999899999999999999999999999999653


No 403
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.97  E-value=1.5e-32  Score=332.18  Aligned_cols=207  Identities=25%  Similarity=0.354  Sum_probs=171.9

Q ss_pred             HHhhcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc-----chhHHHHHHHHHHHHhcCCCceeeeeeeeccC
Q 047591          739 LQRLTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL-----DGAIKSFDAECEVLRRVRHRNLVKIISSCSNH  812 (1624)
Q Consensus       739 l~~~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~  812 (1624)
                      +..+.++|...+.||+|+||+||+|.. .+++.||||++....     ....+.+.+|++++++++|||||++++++.+.
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            445667899999999999999999986 468899999986432     23457899999999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHhc---------------------------------------CCCCCHHHHHHHHHHHHHH
Q 047591          813 GFKALILEYMPQGSLEKWLYSH---------------------------------------KYTLNIQQRLDIMIDVASA  853 (1624)
Q Consensus       813 ~~~~lV~Ey~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~~ia~g  853 (1624)
                      +..++||||+++|+|.+++...                                       ...+++..+..|+.|+++|
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  180 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA  180 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence            9999999999999999998521                                       1123567788899999999


Q ss_pred             HHHHhcCCCCCeEeCcCCCCCeeeCCCC--ceEEEeeeeeeccCCCCC---cccccccccccccCccccCC--CCCCcch
Q 047591          854 LEYLHHGHPTPVIHCDLKPSNVLLDDDT--VAHLSDFGISKLLDGEDS---VTQTMTLATFGYMAPEYGSE--GIVSTCG  926 (1624)
Q Consensus       854 L~yLH~~~~~~IiHrDlKp~NILld~~~--~~kl~DFGla~~~~~~~~---~~~~~~~gt~~Y~aPE~~~~--~~~~~k~  926 (1624)
                      |+|||+.   +|+||||||+||+++.++  .+||+|||+++.+.....   .......||+.|+|||++..  ..++.++
T Consensus       181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  257 (345)
T 3hko_A          181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC  257 (345)
T ss_dssp             HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred             HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence            9999995   599999999999998776  899999999987543211   12234579999999998764  6789999


Q ss_pred             hHHHHHHHHHHHHcCCCCCCcc
Q 047591          927 DVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       927 DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      |||||||++|||+||+.||...
T Consensus       258 DiwslG~il~el~~g~~pf~~~  279 (345)
T 3hko_A          258 DAWSAGVLLHLLLMGAVPFPGV  279 (345)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCS
T ss_pred             HHHHHHHHHHHHHHCCCCCCCC
Confidence            9999999999999999998653


No 404
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.97  E-value=1.6e-32  Score=319.78  Aligned_cols=198  Identities=26%  Similarity=0.496  Sum_probs=163.2

Q ss_pred             CCCCCcceeecCCccceEEEEecCCCEEEEEEeecccc----hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLD----GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ++|+..+.||+|+||.||+|... |+.||||++.....    ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            57888899999999999999875 89999999865432    23467899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCC--------CCceEEEeeeee
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD--------DTVAHLSDFGIS  891 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~--------~~~~kl~DFGla  891 (1624)
                      ||+++|+|.+++..  ..+++..+..++.|+++||+|||+.+..+|+||||||+||+++.        ++.+||+|||++
T Consensus        86 e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~  163 (271)
T 3dtc_A           86 EFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA  163 (271)
T ss_dssp             ECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred             EcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence            99999999999853  36899999999999999999999966455999999999999986        678999999999


Q ss_pred             eccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          892 KLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       892 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      +.......   ....||+.|+|||++....++.++||||||+++|||+||+.||..
T Consensus       164 ~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  216 (271)
T 3dtc_A          164 REWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG  216 (271)
T ss_dssp             ---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred             cccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            87654322   234699999999998888899999999999999999999999865


No 405
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.97  E-value=3.7e-32  Score=325.37  Aligned_cols=199  Identities=24%  Similarity=0.368  Sum_probs=176.2

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccch------hHHHHHHHHHHHHhcCCCceeeeeeeeccCCeE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDG------AIKSFDAECEVLRRVRHRNLVKIISSCSNHGFK  815 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~  815 (1624)
                      .++|...+.||+|+||.||+|+.. +|+.||||++......      ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            456888899999999999999865 6899999998754321      356799999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCC----ceEEEeeeee
Q 047591          816 ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT----VAHLSDFGIS  891 (1624)
Q Consensus       816 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~----~~kl~DFGla  891 (1624)
                      ++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.   +|+||||||+||+++.++    .+||+|||++
T Consensus        91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~  166 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred             EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence            9999999999999999764 4689999999999999999999984   599999999999999888    7999999999


Q ss_pred             eccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          892 KLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       892 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      +.......  .....||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  220 (321)
T 2a2a_A          167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  220 (321)
T ss_dssp             EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             eecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence            87654322  2334699999999999888899999999999999999999999864


No 406
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.97  E-value=4.2e-32  Score=322.79  Aligned_cols=200  Identities=29%  Similarity=0.427  Sum_probs=169.5

Q ss_pred             hcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccc-----hhHHHHHHHHHHHHhcC---CCceeeeeeeeccC
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLD-----GAIKSFDAECEVLRRVR---HRNLVKIISSCSNH  812 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~  812 (1624)
                      ++++|+..+.||+|+||+||+|+. .+|+.||||++.....     .....+.+|++++++++   ||||++++++|...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            467899999999999999999986 5789999999874321     12346778888877765   99999999999765


Q ss_pred             C-----eEEEEEEecCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEE
Q 047591          813 G-----FKALILEYMPQGSLEKWLYSHKY-TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLS  886 (1624)
Q Consensus       813 ~-----~~~lV~Ey~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~  886 (1624)
                      .     ..++||||++ |+|.+++..... .+++.++..|+.|++.||+|||+.   +|+||||||+|||++.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence            4     5799999997 699999986543 489999999999999999999995   49999999999999999999999


Q ss_pred             eeeeeeccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          887 DFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       887 DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      |||+|+.......  .....||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       163 Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  221 (308)
T 3g33_A          163 DFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG  221 (308)
T ss_dssp             SCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCC
T ss_pred             eCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence            9999987654322  2345799999999999888899999999999999999999999865


No 407
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.97  E-value=1.5e-32  Score=323.19  Aligned_cols=194  Identities=23%  Similarity=0.369  Sum_probs=170.6

Q ss_pred             CCCCCcceeecCCccceEEEEec-CC-------CEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YG-------MNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFK  815 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g-------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~  815 (1624)
                      ++|...+.||+|+||+||+|+.. ++       ..||+|++........+.|.+|++++++++||||+++++++.+++..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            56778899999999999999864 23       57999999766556668899999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCc--------eEEEe
Q 047591          816 ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV--------AHLSD  887 (1624)
Q Consensus       816 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~--------~kl~D  887 (1624)
                      ++||||+++|+|.+++......+++..+..|+.|++.||+|||+.   +|+||||||+|||++.++.        +||+|
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D  164 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD  164 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred             EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeecc
Confidence            999999999999999988766699999999999999999999984   5999999999999998887        99999


Q ss_pred             eeeeeccCCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCC
Q 047591          888 FGISKLLDGEDSVTQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPT  945 (1624)
Q Consensus       888 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~  945 (1624)
                      ||+++.....     ....||+.|+|||++.. ..++.++|||||||++|||+||..|+
T Consensus       165 fg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~  218 (289)
T 4fvq_A          165 PGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP  218 (289)
T ss_dssp             CCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             CcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence            9998765332     23458999999998876 67899999999999999999965554


No 408
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.97  E-value=1.5e-32  Score=327.41  Aligned_cols=203  Identities=29%  Similarity=0.454  Sum_probs=176.0

Q ss_pred             cCCCCCcceeecCCccceEEEEe------cCCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL------PYGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFK  815 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~  815 (1624)
                      .++|...+.||+|+||.||+|..      .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            46788889999999999999975      245889999997543 23457789999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCC
Q 047591          816 ALILEYMPQGSLEKWLYSHK-----------------------YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKP  872 (1624)
Q Consensus       816 ~lV~Ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp  872 (1624)
                      ++||||+++|+|.+++....                       ..+++.++..++.|+++||+|||+.   +|+||||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp  178 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA  178 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence            99999999999999998643                       2388999999999999999999984   599999999


Q ss_pred             CCeeeCCCCceEEEeeeeeeccCCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          873 SNVLLDDDTVAHLSDFGISKLLDGEDSVT-QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       873 ~NILld~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      +||++++++.+||+|||+++......... .....+|+.|+|||......++.++|||||||++|||+| |+.||...
T Consensus       179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  256 (314)
T 2ivs_A          179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  256 (314)
T ss_dssp             GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999998775443322 233457889999999888889999999999999999999 99998653


No 409
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.97  E-value=1.5e-32  Score=329.24  Aligned_cols=200  Identities=23%  Similarity=0.343  Sum_probs=166.9

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccch-hHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDG-AIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      ++|...+.||+|+||+||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            56888899999999999999875 7899999998654322 223456899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCcc
Q 047591          822 MPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT  901 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~  901 (1624)
                      ++ |+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....... .
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~  156 (324)
T 3mtl_A           82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-T  156 (324)
T ss_dssp             CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-c
Confidence            98 599999988777799999999999999999999984   599999999999999999999999999986543322 2


Q ss_pred             cccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          902 QTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       902 ~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~  204 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS  204 (324)
T ss_dssp             ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            233468999999998765 56899999999999999999999999653


No 410
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.97  E-value=4.7e-32  Score=326.35  Aligned_cols=202  Identities=27%  Similarity=0.497  Sum_probs=174.2

Q ss_pred             cCCCCCcceeecCCccceEEEEe--------cCCCEEEEEEeecccc-hhHHHHHHHHHHHHhc-CCCceeeeeeeeccC
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL--------PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRV-RHRNLVKIISSCSNH  812 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~--------~~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~  812 (1624)
                      .++|...+.||+|+||+||+|+.        .+++.||||++..... ...+.+.+|+++++++ +||||++++++|.+.
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            36788889999999999999986        3467899999975432 3456789999999999 899999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHhcCC---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee
Q 047591          813 GFKALILEYMPQGSLEKWLYSHKY---------------TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL  877 (1624)
Q Consensus       813 ~~~~lV~Ey~~~gsL~~~l~~~~~---------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl  877 (1624)
                      +..++||||+++|+|.+++.....               .+++.++..++.|+++||+|||+.   +|+||||||+||++
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll  190 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV  190 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence            999999999999999999986532               388999999999999999999984   59999999999999


Q ss_pred             CCCCceEEEeeeeeeccCCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCc
Q 047591          878 DDDTVAHLSDFGISKLLDGEDSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDE  947 (1624)
Q Consensus       878 d~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~  947 (1624)
                      +.++.+||+|||+++........ ......+|+.|+|||++....++.++|||||||++|||+| |+.||..
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~  262 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG  262 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc
Confidence            99999999999999876544322 1233457889999999888889999999999999999999 9999865


No 411
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.97  E-value=3e-32  Score=324.57  Aligned_cols=203  Identities=27%  Similarity=0.454  Sum_probs=176.9

Q ss_pred             cCCCCCcceeecCCccceEEEEe------cCCCEEEEEEeecccc-hhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCe
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL------PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGF  814 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~  814 (1624)
                      .++|...+.||+|+||+||+|+.      .+++.||||++..... ...+.+.+|+.+++++ +||||+++++++.+.+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            45788889999999999999974      3568999999975543 3457799999999999 99999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhcCC-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee
Q 047591          815 KALILEYMPQGSLEKWLYSHKY-----------------TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL  877 (1624)
Q Consensus       815 ~~lV~Ey~~~gsL~~~l~~~~~-----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl  877 (1624)
                      .++||||+++|+|.+++.....                 .+++.++..++.|+++||+|||+.   +|+||||||+||++
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~  178 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL  178 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence            9999999999999999986542                 489999999999999999999994   59999999999999


Q ss_pred             CCCCceEEEeeeeeeccCCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          878 DDDTVAHLSDFGISKLLDGEDSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       878 d~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      +.++.+||+|||+++........ ......||+.|+|||++....++.++|||||||++|||+| |+.||...
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  251 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM  251 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence            99999999999999877554332 2233457889999999888889999999999999999999 99998754


No 412
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97  E-value=7.6e-32  Score=324.63  Aligned_cols=211  Identities=27%  Similarity=0.420  Sum_probs=170.3

Q ss_pred             HHHHhhcCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhc--CCCceeeeeeeeccC--
Q 047591          737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV--RHRNLVKIISSCSNH--  812 (1624)
Q Consensus       737 ~el~~~t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~--  812 (1624)
                      ..-....++|+..+.||+|+||+||+|+.. |+.||||++....   ...+.+|.+++...  +||||+++++++...  
T Consensus        30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~  105 (337)
T 3mdy_A           30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTG  105 (337)
T ss_dssp             HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred             ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence            333445678999999999999999999875 8999999986432   24455666666654  899999999998876  


Q ss_pred             --CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEeCcCCCCCeeeCCCCceEE
Q 047591          813 --GFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGH-----PTPVIHCDLKPSNVLLDDDTVAHL  885 (1624)
Q Consensus       813 --~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~IiHrDlKp~NILld~~~~~kl  885 (1624)
                        ...++||||+++|+|.++++..  .+++.++..++.|++.||+|||+..     .++|+||||||+|||++.++.+||
T Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl  183 (337)
T 3mdy_A          106 SWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI  183 (337)
T ss_dssp             GGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred             CCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence              6889999999999999999764  5899999999999999999999851     236999999999999999999999


Q ss_pred             EeeeeeeccCCCCCcc---cccccccccccCccccCCCCCCcc------hhHHHHHHHHHHHHcC----------CCCCC
Q 047591          886 SDFGISKLLDGEDSVT---QTMTLATFGYMAPEYGSEGIVSTC------GDVYSFGILMIETFTR----------KMPTD  946 (1624)
Q Consensus       886 ~DFGla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~~~~~k------~DvwS~Gvil~elltg----------~~P~~  946 (1624)
                      +|||+|+.........   .....||+.|+|||++.....+.+      +|||||||++|||+||          +.||.
T Consensus       184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~  263 (337)
T 3mdy_A          184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH  263 (337)
T ss_dssp             CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence            9999998765433221   123479999999999877666554      9999999999999999          66665


Q ss_pred             ccCcCcc
Q 047591          947 EMFTGET  953 (1624)
Q Consensus       947 ~~~~~~~  953 (1624)
                      .......
T Consensus       264 ~~~~~~~  270 (337)
T 3mdy_A          264 DLVPSDP  270 (337)
T ss_dssp             TTSCSSC
T ss_pred             hhcCCCC
Confidence            5444333


No 413
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.97  E-value=4.8e-32  Score=322.52  Aligned_cols=201  Identities=26%  Similarity=0.327  Sum_probs=165.7

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc---hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD---GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      .++|...+.||+|+||.||+|+.. +++.||||++.....   ...+.+.+|+.++++++||||+++++++..++..|+|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            478899999999999999999865 689999999875432   2346789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++++|.+++.... .+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++......
T Consensus       113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  188 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK  188 (309)
T ss_dssp             EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred             EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence            99999999999997653 689999999999999999999994   59999999999999999999999999998765543


Q ss_pred             CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ........||+.|+|||++....++.++||||||+++|||+||+.||..
T Consensus       189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  237 (309)
T 2h34_A          189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG  237 (309)
T ss_dssp             --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCS
T ss_pred             cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCC
Confidence            3333345799999999999888999999999999999999999999864


No 414
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.97  E-value=3.3e-32  Score=341.58  Aligned_cols=197  Identities=24%  Similarity=0.297  Sum_probs=165.2

Q ss_pred             hcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccC------
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNH------  812 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------  812 (1624)
                      ..++|+..+.||+|+||+||+|.. .+|+.||||++....  ....+.+.+|+.++++++|||||++++++...      
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            357899999999999999999985 468999999997542  33456789999999999999999999998644      


Q ss_pred             CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeee
Q 047591          813 GFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK  892 (1624)
Q Consensus       813 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~  892 (1624)
                      ...|+|||||++ +|.+.+..   .+++.++..++.|+++||+|||+.   +|+||||||+|||++.++.+||+|||+|+
T Consensus       140 ~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~  212 (464)
T 3ttj_A          140 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR  212 (464)
T ss_dssp             CEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred             CeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence            467999999986 57776643   488999999999999999999995   59999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          893 LLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       893 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ......  ..+..+||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus       213 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g  265 (464)
T 3ttj_A          213 TAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG  265 (464)
T ss_dssp             ----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            765432  23345799999999999888999999999999999999999999864


No 415
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.97  E-value=1.6e-32  Score=322.80  Aligned_cols=204  Identities=26%  Similarity=0.462  Sum_probs=180.1

Q ss_pred             hhcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          741 RLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       741 ~~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ...++|...+.||+|+||+||+|... ++..||||++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   88 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   88 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence            34567888899999999999999875 48899999997543 34578999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          820 EYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      ||+++|+|.+++.... ..+++..+..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++......
T Consensus        89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  165 (288)
T 3kfa_A           89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  165 (288)
T ss_dssp             ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred             EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence            9999999999998643 4589999999999999999999985   59999999999999999999999999998876554


Q ss_pred             CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ........+|+.|+|||+.....++.++||||||+++|||+| |+.||...
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~  216 (288)
T 3kfa_A          166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI  216 (288)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            444444568889999999988889999999999999999999 99998653


No 416
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.97  E-value=1.6e-32  Score=328.79  Aligned_cols=207  Identities=26%  Similarity=0.475  Sum_probs=161.3

Q ss_pred             HHhhcCCCCCcceeecCCccceEEEEecC-C---CEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeccC
Q 047591          739 LQRLTDGFSESNLIGAGSFGSVYKATLPY-G---MNVAIKVFNLQ--LDGAIKSFDAECEVLRRVRHRNLVKIISSCSNH  812 (1624)
Q Consensus       739 l~~~t~~f~~~~~iG~G~~G~Vy~~~~~~-g---~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~  812 (1624)
                      +....++|...+.||+|+||+||+|+... +   ..||||++...  .....+.|.+|++++++++||||+++++++...
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   97 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS   97 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence            33446789999999999999999998653 3   37999998754  234567899999999999999999999999876


Q ss_pred             CeE------EEEEEecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCC
Q 047591          813 GFK------ALILEYMPQGSLEKWLYSHK-----YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT  881 (1624)
Q Consensus       813 ~~~------~lV~Ey~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~  881 (1624)
                      ...      ++||||+++|+|.+++....     ..+++.++..|+.|+++||+|||+.   +|+||||||+|||+++++
T Consensus        98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~  174 (323)
T 3qup_A           98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDM  174 (323)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTS
T ss_pred             ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCC
Confidence            655      99999999999999996532     2589999999999999999999994   599999999999999999


Q ss_pred             ceEEEeeeeeeccCCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          882 VAHLSDFGISKLLDGEDSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       882 ~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      .+||+|||+|+........ ......+|+.|+|||.+....++.++|||||||++|||+| |+.||...
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~  243 (323)
T 3qup_A          175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI  243 (323)
T ss_dssp             CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc
Confidence            9999999999876543322 1223457889999999988889999999999999999999 89998753


No 417
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.97  E-value=9.2e-32  Score=315.69  Aligned_cols=200  Identities=21%  Similarity=0.396  Sum_probs=176.1

Q ss_pred             hcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      ..++|+..+.||+|+||.||+|... +|+.||||++....  ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   83 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   83 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence            4578999999999999999999864 68999999997543  23456788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCc---eEEEeeeeeeccC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV---AHLSDFGISKLLD  895 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~---~kl~DFGla~~~~  895 (1624)
                      |||+++|+|.+++.... .+++.++..++.|++.||+|||+.   +|+||||||+||+++.++.   +||+|||+++...
T Consensus        84 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~  159 (284)
T 3kk8_A           84 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  159 (284)
T ss_dssp             ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence            99999999999987654 689999999999999999999994   5999999999999986654   9999999998765


Q ss_pred             CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          896 GEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       896 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ....  .....||+.|+|||++....++.++||||||+++|||++|+.||..
T Consensus       160 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  209 (284)
T 3kk8_A          160 DSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD  209 (284)
T ss_dssp             SSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC
Confidence            4322  2335699999999999988899999999999999999999999864


No 418
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97  E-value=5e-32  Score=329.92  Aligned_cols=209  Identities=24%  Similarity=0.306  Sum_probs=173.5

Q ss_pred             ccCHHHHHhhcCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccc-----------hhHHHHHHHHHHHHhcCCCc
Q 047591          733 RISYQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLD-----------GAIKSFDAECEVLRRVRHRN  801 (1624)
Q Consensus       733 ~~~~~el~~~t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~-----------~~~~~~~~E~~~l~~l~H~n  801 (1624)
                      +...+++..+.++|...+.||+|+||.||+|...+|+.||||++.....           ...+.+.+|++++++++|||
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   90 (362)
T 3pg1_A           11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN   90 (362)
T ss_dssp             HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred             HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence            3456788899999999999999999999999988899999999854321           12367999999999999999


Q ss_pred             eeeeeeeec-----cCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCee
Q 047591          802 LVKIISSCS-----NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVL  876 (1624)
Q Consensus       802 iv~l~~~~~-----~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NIL  876 (1624)
                      |+++++++.     .....|+||||++ |+|.+++......+++..+..++.|++.||+|||+.   +|+||||||+||+
T Consensus        91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl  166 (362)
T 3pg1_A           91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL  166 (362)
T ss_dssp             BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence            999999983     3446899999998 699999987766799999999999999999999995   5999999999999


Q ss_pred             eCCCCceEEEeeeeeeccCCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          877 LDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       877 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ++.++.+||+|||+++......  ......||+.|+|||++.. ..++.++|||||||++|||+||+.||..
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  236 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG  236 (362)
T ss_dssp             ECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             EcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCC
Confidence            9999999999999998654332  2233568999999998766 6789999999999999999999999865


No 419
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97  E-value=3.5e-32  Score=331.83  Aligned_cols=200  Identities=26%  Similarity=0.454  Sum_probs=160.4

Q ss_pred             CCCcceeecCCccceEEEEec--CC--CEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeecc-CCeEEEEE
Q 047591          746 FSESNLIGAGSFGSVYKATLP--YG--MNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSN-HGFKALIL  819 (1624)
Q Consensus       746 f~~~~~iG~G~~G~Vy~~~~~--~g--~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV~  819 (1624)
                      |...+.||+|+||+||+|+..  ++  ..||||.+.... ....+.|.+|+.++++++|||||+++++|.+ ++..++||
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            455689999999999999863  22  468999986433 3456789999999999999999999998754 56789999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||+++|+|.++++.....+++.++..++.|+++||+|||+.   +|+||||||+|||+++++.+||+|||+++.......
T Consensus       171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccccc
Confidence            99999999999987777789999999999999999999984   599999999999999999999999999987643321


Q ss_pred             c---ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          900 V---TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       900 ~---~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      .   ......+|+.|+|||++....++.++|||||||++|||+| |..||...
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~  300 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV  300 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred             ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence            1   1223457889999999988899999999999999999999 66777543


No 420
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97  E-value=2.5e-32  Score=354.00  Aligned_cols=194  Identities=27%  Similarity=0.462  Sum_probs=165.5

Q ss_pred             eeecCCccceEEEEec---CCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEecCCCC
Q 047591          751 LIGAGSFGSVYKATLP---YGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGS  826 (1624)
Q Consensus       751 ~iG~G~~G~Vy~~~~~---~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs  826 (1624)
                      .||+|+||+||+|.+.   ++..||||+++... ....+.|.+|+++|++++|||||+++++|.. +..++|||||++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            7999999999999764   46789999997543 3356789999999999999999999999976 56899999999999


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCcc--ccc
Q 047591          827 LEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT--QTM  904 (1624)
Q Consensus       827 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~--~~~  904 (1624)
                      |.+++......+++.++..|+.||++||+|||+.   +||||||||+|||+++++.+||+|||+|+.........  ...
T Consensus       422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~  498 (613)
T 2ozo_A          422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  498 (613)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence            9999987766799999999999999999999984   59999999999999999999999999998765433221  122


Q ss_pred             ccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          905 TLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       905 ~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ..+|+.|+|||++..+.++.++|||||||++|||+| |+.||...
T Consensus       499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~  543 (613)
T 2ozo_A          499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM  543 (613)
T ss_dssp             ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            346789999999988899999999999999999998 99999764


No 421
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.97  E-value=4.2e-32  Score=341.37  Aligned_cols=197  Identities=25%  Similarity=0.335  Sum_probs=155.8

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeec-----cCCe
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCS-----NHGF  814 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-----~~~~  814 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||++....  ....+.+.+|+++|++++|||||++++++.     ....
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            467899999999999999999864 68999999986532  234577899999999999999999999984     3357


Q ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeecc
Q 047591          815 KALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL  894 (1624)
Q Consensus       815 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~  894 (1624)
                      .|+||||+. |+|.+++... ..+++..+..|+.||+.||+|||+.   +||||||||+|||++.++.+||+|||+|+..
T Consensus       132 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  206 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV  206 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred             EEEEEeccc-cchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence            899999985 7999999754 4689999999999999999999995   5999999999999999999999999999876


Q ss_pred             CCCCC--------------------------cccccccccccccCcccc-CCCCCCcchhHHHHHHHHHHHHcCCCC
Q 047591          895 DGEDS--------------------------VTQTMTLATFGYMAPEYG-SEGIVSTCGDVYSFGILMIETFTRKMP  944 (1624)
Q Consensus       895 ~~~~~--------------------------~~~~~~~gt~~Y~aPE~~-~~~~~~~k~DvwS~Gvil~elltg~~P  944 (1624)
                      .....                          ...+..+||+.|+|||++ ....++.++|||||||++|||+||..|
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~  283 (458)
T 3rp9_A          207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE  283 (458)
T ss_dssp             TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred             cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence            43211                          112335789999999975 566799999999999999999995444


No 422
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.97  E-value=3.6e-32  Score=324.54  Aligned_cols=201  Identities=23%  Similarity=0.328  Sum_probs=167.9

Q ss_pred             CCCCC-cceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCeEEEEEE
Q 047591          744 DGFSE-SNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       744 ~~f~~-~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      +.|.. .+.||+|+||+||+|+. .+++.||||++........+.+.+|++++.++ +||||+++++++.+.+..|+|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            45665 37899999999999985 47899999999766555567899999999985 79999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCc---eEEEeeeeeeccCCC
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV---AHLSDFGISKLLDGE  897 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~---~kl~DFGla~~~~~~  897 (1624)
                      |+++|+|.+++.... .+++.++..++.|++.||+|||+.   +|+||||||+|||++.++.   +||+|||+++.....
T Consensus        92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  167 (316)
T 2ac3_A           92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN  167 (316)
T ss_dssp             CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred             cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence            999999999997654 689999999999999999999995   5999999999999998775   999999999865422


Q ss_pred             CC------cccccccccccccCccccCC-----CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          898 DS------VTQTMTLATFGYMAPEYGSE-----GIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       898 ~~------~~~~~~~gt~~Y~aPE~~~~-----~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ..      .......||+.|+|||++..     ..++.++|||||||++|||+||+.||...
T Consensus       168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~  229 (316)
T 2ac3_A          168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR  229 (316)
T ss_dssp             --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred             CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccc
Confidence            11      11123469999999998754     56889999999999999999999999754


No 423
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.97  E-value=3e-32  Score=325.29  Aligned_cols=201  Identities=23%  Similarity=0.267  Sum_probs=170.4

Q ss_pred             CCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeec----cCCeEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS----NHGFKALI  818 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~----~~~~~~lV  818 (1624)
                      ++|...+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++||||+++++++.    .....++|
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  108 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL  108 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence            5688889999999999999986 578999999987665556678999999999999999999999986    34578999


Q ss_pred             EEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccC
Q 047591          819 LEYMPQGSLEKWLYS---HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD  895 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~  895 (1624)
                      |||+++|+|.+++..   ....+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++...
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~  185 (317)
T 2buj_A          109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC  185 (317)
T ss_dssp             EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred             EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence            999999999999976   345689999999999999999999995   59999999999999999999999999987653


Q ss_pred             CCCCc--------ccccccccccccCccccCCCC---CCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          896 GEDSV--------TQTMTLATFGYMAPEYGSEGI---VSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       896 ~~~~~--------~~~~~~gt~~Y~aPE~~~~~~---~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .....        ......||+.|+|||.+....   ++.++|||||||++|||+||+.||..
T Consensus       186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  248 (317)
T 2buj_A          186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM  248 (317)
T ss_dssp             EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred             cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence            21110        012235799999999876543   68999999999999999999999864


No 424
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.97  E-value=5e-32  Score=316.46  Aligned_cols=212  Identities=22%  Similarity=0.357  Sum_probs=178.7

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      .++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            356888899999999999999875 68999999997543 2345778999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC-
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS-  899 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~-  899 (1624)
                      |+++|+|.+++... ..+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++....... 
T Consensus        86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  161 (276)
T 2yex_A           86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (276)
T ss_dssp             CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             ecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence            99999999998653 3689999999999999999999984   599999999999999999999999999986543221 


Q ss_pred             cccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCCccCcCcchHHHH
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW  958 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DvwS~Gvil~elltg~~P~~~~~~~~~~l~~~  958 (1624)
                      .......||+.|+|||......+ +.++||||||+++|||+||+.||............|
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  221 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW  221 (276)
T ss_dssp             CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHH
T ss_pred             hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHh
Confidence            11233569999999999876665 789999999999999999999997644333333333


No 425
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.97  E-value=2.7e-32  Score=323.24  Aligned_cols=200  Identities=27%  Similarity=0.454  Sum_probs=172.1

Q ss_pred             CCCCCcceeecCCccceEEEEe-----cCCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccC--CeE
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-----PYGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNH--GFK  815 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-----~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~  815 (1624)
                      +.|+..+.||+|+||.||+|++     .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            3467788999999999999983     468999999997543 23457899999999999999999999999876  668


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccC
Q 047591          816 ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD  895 (1624)
Q Consensus       816 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~  895 (1624)
                      ++||||+++|+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++...
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  177 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE  177 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccccc
Confidence            999999999999999977666799999999999999999999984   59999999999999999999999999998876


Q ss_pred             CCCCc--ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCC
Q 047591          896 GEDSV--TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTD  946 (1624)
Q Consensus       896 ~~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~  946 (1624)
                      .....  ......||..|+|||++....++.++|||||||++|||+||+.|+.
T Consensus       178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  230 (302)
T 4e5w_A          178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS  230 (302)
T ss_dssp             TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred             CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence            54321  2233468889999999888889999999999999999999999864


No 426
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.97  E-value=8.1e-32  Score=328.16  Aligned_cols=205  Identities=25%  Similarity=0.427  Sum_probs=177.6

Q ss_pred             HHHHhhcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc--------hhHHHHHHHHHHHHhc-CCCceeeee
Q 047591          737 QELQRLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD--------GAIKSFDAECEVLRRV-RHRNLVKII  806 (1624)
Q Consensus       737 ~el~~~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l-~H~niv~l~  806 (1624)
                      .......++|...+.||+|+||.||+|+.. +|+.||||++.....        ...+.+.+|+++++++ +||||++++
T Consensus        87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~  166 (365)
T 2y7j_A           87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI  166 (365)
T ss_dssp             HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence            344555678999999999999999999875 799999999875431        1245688999999999 799999999


Q ss_pred             eeeccCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEE
Q 047591          807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLS  886 (1624)
Q Consensus       807 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~  886 (1624)
                      +++......|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+.   +|+||||||+||+++.++.+||+
T Consensus       167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~  242 (365)
T 2y7j_A          167 DSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLS  242 (365)
T ss_dssp             EEEEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred             EEEeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEE
Confidence            9999999999999999999999999764 3689999999999999999999984   59999999999999999999999


Q ss_pred             eeeeeeccCCCCCcccccccccccccCccccC------CCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          887 DFGISKLLDGEDSVTQTMTLATFGYMAPEYGS------EGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       887 DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      |||+++.......  .....||+.|+|||++.      ...++.++|||||||++|||+||+.||..
T Consensus       243 DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  307 (365)
T 2y7j_A          243 DFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH  307 (365)
T ss_dssp             CCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence            9999987754332  23357999999999864      33588999999999999999999999864


No 427
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97  E-value=4.3e-31  Score=319.68  Aligned_cols=305  Identities=25%  Similarity=0.407  Sum_probs=147.5

Q ss_pred             CCCCCCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCcccccccccccccccccCccccccccc
Q 047591          134 WLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELM  213 (1624)
Q Consensus       134 ~~l~~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~  213 (1624)
                      ..+++|++|++++|.++. ++.  +..+++|++|++++|++++ +|. +..+++|++|+|++|.++. +| .+.++++|+
T Consensus        41 ~~l~~L~~L~l~~~~i~~-~~~--~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~  113 (347)
T 4fmz_A           41 EELESITKLVVAGEKVAS-IQG--IEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR  113 (347)
T ss_dssp             HHHTTCSEEECCSSCCCC-CTT--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred             hhcccccEEEEeCCcccc-chh--hhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence            355666666666666653 221  3456666666666666653 333 5566666666666666553 33 355555555


Q ss_pred             ceeccCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEeecccccccCcCCccccccCcCCeeeccCC
Q 047591          214 ELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDN  293 (1624)
Q Consensus       214 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N  293 (1624)
                      +|+|++|++++ +|. +.++++|++|++++|.....++                         . +..+++|++|++++|
T Consensus       114 ~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~-------------------------~-~~~l~~L~~L~l~~~  165 (347)
T 4fmz_A          114 ELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLS-------------------------P-LSNMTGLNYLTVTES  165 (347)
T ss_dssp             EEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCG-------------------------G-GTTCTTCCEEECCSS
T ss_pred             EEECcCCcccC-chh-hccCCceeEEECCCCCCccccc-------------------------c-hhhCCCCcEEEecCC
Confidence            55555555553 222 4444444444444443332222                         2 444444444444444


Q ss_pred             cccccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCC
Q 047591          294 QLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSR  373 (1624)
Q Consensus       294 ~l~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~  373 (1624)
                      ++.++.         . +.++.+|+.|++++|.+++ ++.  ...+++|+.|++++|++++..+  +..+++|++|+|++
T Consensus       166 ~~~~~~---------~-~~~l~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~  230 (347)
T 4fmz_A          166 KVKDVT---------P-IANLTDLYSLSLNYNQIED-ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGN  230 (347)
T ss_dssp             CCCCCG---------G-GGGCTTCSEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCS
T ss_pred             CcCCch---------h-hccCCCCCEEEccCCcccc-ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccC
Confidence            433211         0 2233333333333333332 111  1234455555555555554322  44555555555555


Q ss_pred             ccccccCcccccccccccEEEccccccccCCCCCCcccccccccccccceeeeccCCCCccCCCcccCccccchhhccCC
Q 047591          374 NLFSGLVANTFGNCRQLQILNLAYSQLATGSLSQGQSFFSSLTNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGS  453 (1624)
Q Consensus       374 N~l~g~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~~L~~L~l~~N~~~g~~p~~~~~l~~~L~~L~l~~  453 (1624)
                      |.+++..+  +..+++|++|++++|+++.                                                   
T Consensus       231 n~l~~~~~--~~~l~~L~~L~l~~n~l~~---------------------------------------------------  257 (347)
T 4fmz_A          231 NKITDLSP--LANLSQLTWLEIGTNQISD---------------------------------------------------  257 (347)
T ss_dssp             SCCCCCGG--GTTCTTCCEEECCSSCCCC---------------------------------------------------
T ss_pred             CccCCCcc--hhcCCCCCEEECCCCccCC---------------------------------------------------
Confidence            55554433  4444444444444443321                                                   


Q ss_pred             cccCCCCCCCcCCCCcccEEeccCCccCCCccchhccccccceecccccccccCCCccccCCCCCceeecccccccCCCc
Q 047591          454 CELGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIP  533 (1624)
Q Consensus       454 n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP  533 (1624)
                            + +.+..+++|++|++++|++++.  +.+..+++|++|+|++|++++..|..++++++|+.|+|++|++++..|
T Consensus       258 ------~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~  328 (347)
T 4fmz_A          258 ------I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP  328 (347)
T ss_dssp             ------C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred             ------C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence                  0 1233444555555555555432  234555555555555555555555555555555555555555554333


Q ss_pred             cccccccCCccccccCccc
Q 047591          534 TCLANLTSLRALNLSSNRL  552 (1624)
Q Consensus       534 ~~~~~l~~L~~L~Ls~N~l  552 (1624)
                        +..+++|+.|++++|.+
T Consensus       329 --~~~l~~L~~L~l~~N~i  345 (347)
T 4fmz_A          329 --LASLSKMDSADFANQVI  345 (347)
T ss_dssp             --GGGCTTCSEESSSCC--
T ss_pred             --hhhhhccceeehhhhcc
Confidence              55555555555555554


No 428
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.97  E-value=6.9e-32  Score=315.36  Aligned_cols=198  Identities=26%  Similarity=0.452  Sum_probs=153.0

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      .++|+..+.||+|+||+||+|+. .+|+.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (275)
T 2eue_A           12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred             ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence            36799999999999999999985 468999999987542   23356789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+ +++|.+++.... .+++.++..++.|++.||+|||+.   +|+||||||+||++++++.+||+|||+++......
T Consensus        92 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  166 (275)
T 2eue_A           92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN  166 (275)
T ss_dssp             EECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred             ehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence            9999 678999887654 689999999999999999999985   59999999999999999999999999998765432


Q ss_pred             CcccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .  .....||+.|+|||.+....+ +.++|||||||++|||+||+.||..
T Consensus       167 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  214 (275)
T 2eue_A          167 F--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD  214 (275)
T ss_dssp             ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             c--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence            2  223469999999999877655 7899999999999999999999865


No 429
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.97  E-value=2e-32  Score=320.61  Aligned_cols=201  Identities=26%  Similarity=0.462  Sum_probs=174.7

Q ss_pred             hcCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      ..++|...+.||+|+||.||+|...++..||||++.... ...+.|.+|++++++++||||+++++++.+ +..++||||
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~   88 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY   88 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence            346788889999999999999998888899999987543 235789999999999999999999999875 457999999


Q ss_pred             cCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCc
Q 047591          822 MPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV  900 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~  900 (1624)
                      +++|+|.+++.... ..+++.++..++.|++.||+|||+.   +|+||||||+||++++++.+||+|||+++........
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  165 (279)
T 1qpc_A           89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT  165 (279)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence            99999999996532 2589999999999999999999984   5999999999999999999999999999887654333


Q ss_pred             ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCc
Q 047591          901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDE  947 (1624)
Q Consensus       901 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~  947 (1624)
                      ......+|+.|+|||....+.++.++|||||||++|||+| |+.||..
T Consensus       166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~  213 (279)
T 1qpc_A          166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG  213 (279)
T ss_dssp             CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence            3334457889999999888889999999999999999999 8999865


No 430
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.97  E-value=3.5e-32  Score=316.60  Aligned_cols=197  Identities=22%  Similarity=0.395  Sum_probs=170.1

Q ss_pred             CCCCCcceeecCCccceEEEEecCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccC--CeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNH--GFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~  819 (1624)
                      ++|...+.||+|+||+||+|+.. |+.||||++....  ....+.|.+|+.++++++||||+++++++.+.  +..++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            46778899999999999999985 8999999997653  23456799999999999999999999999877  7789999


Q ss_pred             EecCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          820 EYMPQGSLEKWLYSHKY-TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      ||+++|+|.+++..... .+++.++..|+.|++.||+|||+.+ .+|+||||||+||++++++.+||+|||++...... 
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~-  166 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-  166 (271)
T ss_dssp             ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT-
T ss_pred             cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeeccc-
Confidence            99999999999987543 5899999999999999999999853 34999999999999999999999999987653322 


Q ss_pred             CcccccccccccccCccccCCCCCC---cchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIVS---TCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~~---~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                           ...||+.|+|||.+.....+   .++|||||||++|||+||+.||...
T Consensus       167 -----~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  214 (271)
T 3kmu_A          167 -----GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL  214 (271)
T ss_dssp             -----TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS
T ss_pred             -----CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence                 23689999999988765444   3899999999999999999998753


No 431
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.97  E-value=2.8e-32  Score=327.22  Aligned_cols=201  Identities=26%  Similarity=0.411  Sum_probs=176.4

Q ss_pred             CCCCCcceeecCCccceEEEEe-----cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeec--cCCeEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-----PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS--NHGFKA  816 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~~  816 (1624)
                      ++|+..+.||+|+||.||+|++     .+++.||||++........+.+.+|++++++++||||+++++++.  +....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            4677889999999999999984     468899999998665556678999999999999999999999886  556789


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCC
Q 047591          817 LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG  896 (1624)
Q Consensus       817 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~  896 (1624)
                      +||||+++|+|.+++......+++.++..|+.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPL  179 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence            99999999999999987666799999999999999999999984   599999999999999999999999999997754


Q ss_pred             CCCc--ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          897 EDSV--TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       897 ~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ....  ......||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~  232 (327)
T 3lxl_A          180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS  232 (327)
T ss_dssp             TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            3322  22334688899999998888899999999999999999999999753


No 432
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.97  E-value=7e-32  Score=315.99  Aligned_cols=199  Identities=28%  Similarity=0.421  Sum_probs=172.7

Q ss_pred             hcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      +.++|...+.||+|+||+||+|... +++.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            4567889999999999999999864 57899999986432   2234678999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      ||||+++|+|.+++.... .+++..+..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||++......
T Consensus        87 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~  162 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  162 (279)
T ss_dssp             EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred             EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence            999999999999997653 689999999999999999999984   5999999999999999999999999998765432


Q ss_pred             CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       898 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .   .....||+.|+|||.+....++.++||||||+++|||++|+.||..
T Consensus       163 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  209 (279)
T 3fdn_A          163 R---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA  209 (279)
T ss_dssp             --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             c---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC
Confidence            2   2334689999999999888899999999999999999999999864


No 433
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.97  E-value=6.2e-32  Score=317.60  Aligned_cols=198  Identities=28%  Similarity=0.407  Sum_probs=168.8

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      ++|...+.||+|+||+||+|+.. ++..||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            56888899999999999999864 689999999876542 3457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee---CCCCceEEEeeeeeeccC
Q 047591          822 MPQGSLEKWLYSH---KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLD  895 (1624)
Q Consensus       822 ~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl---d~~~~~kl~DFGla~~~~  895 (1624)
                      +++|+|.+++...   ...+++..+..|+.|+++||+|||+.   +|+||||||+||++   +.++.+||+|||+++...
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            9999999998643   35789999999999999999999984   59999999999999   456789999999998765


Q ss_pred             CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          896 GEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       896 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ....  .....||+.|+|||.+. +.++.++|||||||++|||+||+.||..
T Consensus       179 ~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~  227 (285)
T 3is5_A          179 SDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTG  227 (285)
T ss_dssp             ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             Cccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCC
Confidence            4322  23346999999999875 5689999999999999999999999865


No 434
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.97  E-value=6.6e-32  Score=336.56  Aligned_cols=200  Identities=26%  Similarity=0.347  Sum_probs=168.4

Q ss_pred             hcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccC-----C
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNH-----G  813 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~  813 (1624)
                      ..++|...+.||+|+||+||+|+.. +|+.||||++....  ....+.+.+|+.++++++|||||++++++...     .
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence            3578999999999999999999864 68899999997532  23456889999999999999999999998766     5


Q ss_pred             eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeec
Q 047591          814 FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKL  893 (1624)
Q Consensus       814 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~  893 (1624)
                      ..|+||||++ |+|.+++... ..+++..+..|+.||++||+|||+.   +|+||||||+|||++.++.+||+|||+|+.
T Consensus       104 ~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~  178 (432)
T 3n9x_A          104 ELYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART  178 (432)
T ss_dssp             CEEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence            6899999997 5999999754 4689999999999999999999995   599999999999999999999999999997


Q ss_pred             cCCCCCc---------------------ccccccccccccCcccc-CCCCCCcchhHHHHHHHHHHHHcCCCCCC
Q 047591          894 LDGEDSV---------------------TQTMTLATFGYMAPEYG-SEGIVSTCGDVYSFGILMIETFTRKMPTD  946 (1624)
Q Consensus       894 ~~~~~~~---------------------~~~~~~gt~~Y~aPE~~-~~~~~~~k~DvwS~Gvil~elltg~~P~~  946 (1624)
                      .......                     ..+..+||+.|+|||++ ....++.++||||+||++|||+||..|+.
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            6543211                     12445799999999975 56679999999999999999999877764


No 435
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.97  E-value=3.9e-32  Score=326.78  Aligned_cols=206  Identities=26%  Similarity=0.428  Sum_probs=176.4

Q ss_pred             HhhcCCCCCcceeecCCccceEEEEec-C-----CCEEEEEEeecccc-hhHHHHHHHHHHHHhc-CCCceeeeeeeecc
Q 047591          740 QRLTDGFSESNLIGAGSFGSVYKATLP-Y-----GMNVAIKVFNLQLD-GAIKSFDAECEVLRRV-RHRNLVKIISSCSN  811 (1624)
Q Consensus       740 ~~~t~~f~~~~~iG~G~~G~Vy~~~~~-~-----g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~  811 (1624)
                      +...++|...+.||+|+||+||+|... +     +..||||++..... ...+.+.+|+.+++++ +||||++++++|.+
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  121 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH  121 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence            344578889999999999999999864 2     24899999975533 3456799999999999 89999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeC
Q 047591          812 HGFKALILEYMPQGSLEKWLYSHK-------------YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLD  878 (1624)
Q Consensus       812 ~~~~~lV~Ey~~~gsL~~~l~~~~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld  878 (1624)
                      .+..++||||+++|+|.+++....             ..+++.++..++.|++.||+|||+.   +|+||||||+||+++
T Consensus       122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT  198 (333)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEE
T ss_pred             CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEEC
Confidence            999999999999999999997532             3578999999999999999999984   599999999999999


Q ss_pred             CCCceEEEeeeeeeccCCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          879 DDTVAHLSDFGISKLLDGEDSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       879 ~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      .++.+||+|||+++........ ......||+.|+|||.+....++.++|||||||++|||+| |+.||...
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  270 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI  270 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence            9999999999999866433222 2233467889999999888889999999999999999999 89998754


No 436
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.97  E-value=1.3e-31  Score=316.17  Aligned_cols=199  Identities=23%  Similarity=0.332  Sum_probs=175.8

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ++|...+.||+|+||+||+|... +++.||+|++....   ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            56788899999999999999875 58899999987543   234567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||+++++|.+++.... .+++.++..++.|+++||+|||+.   +|+||||||+||++++++.+||+|||+++.......
T Consensus        95 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  170 (294)
T 2rku_A           95 ELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  170 (294)
T ss_dssp             ECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence            9999999999987643 689999999999999999999994   599999999999999999999999999987653322


Q ss_pred             cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                       ......||+.|+|||.+....++.++||||||+++|||+||+.||..
T Consensus       171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  217 (294)
T 2rku_A          171 -RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  217 (294)
T ss_dssp             -CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             -ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence             22335699999999999888899999999999999999999999865


No 437
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.97  E-value=2.2e-32  Score=329.78  Aligned_cols=197  Identities=26%  Similarity=0.435  Sum_probs=170.3

Q ss_pred             hcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCeEEEEE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ..++|...+.||+|+||+||+|... +|+.||||++.....    .+.+|++++.++ +||||+++++++.+.+..|+||
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            4567888999999999999999865 689999999975432    245788889888 7999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCC----CceEEEeeeeeeccC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDD----TVAHLSDFGISKLLD  895 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~----~~~kl~DFGla~~~~  895 (1624)
                      ||+++|+|.+++...+ .+++.++..++.|++.||+|||+.   +|+||||||+|||+.++    +.+||+|||+++...
T Consensus        96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~  171 (342)
T 2qr7_A           96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR  171 (342)
T ss_dssp             CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred             eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence            9999999999997654 689999999999999999999995   59999999999998433    359999999999765


Q ss_pred             CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          896 GEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       896 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ..... ....+||+.|+|||++....++.++|||||||++|||++|+.||..
T Consensus       172 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  222 (342)
T 2qr7_A          172 AENGL-LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN  222 (342)
T ss_dssp             CTTCC-BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             CCCCc-eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCC
Confidence            44322 2335799999999998877789999999999999999999999964


No 438
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.97  E-value=8.4e-32  Score=320.54  Aligned_cols=200  Identities=26%  Similarity=0.331  Sum_probs=169.1

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++.....  ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            67888999999999999999875 589999999865432  234678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCc
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV  900 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~  900 (1624)
                      |+++++|.+++... ..+++..+..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++........
T Consensus        83 ~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  158 (311)
T 4agu_A           83 YCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY  158 (311)
T ss_dssp             CCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             eCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence            99999999988654 4689999999999999999999984   5999999999999999999999999999876543222


Q ss_pred             ccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          901 TQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       901 ~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                       .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus       159 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  206 (311)
T 4agu_A          159 -YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGK  206 (311)
T ss_dssp             --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             -cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence             233479999999998754 67899999999999999999999998653


No 439
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.97  E-value=3.3e-32  Score=326.98  Aligned_cols=200  Identities=25%  Similarity=0.384  Sum_probs=164.0

Q ss_pred             hcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      ..++|...+.||+|+||+||+|+. .+|+.||||++.....  ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            456788999999999999999985 4789999999865432  2345678999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee-----CCCCceEEEeeeeeec
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL-----DDDTVAHLSDFGISKL  893 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl-----d~~~~~kl~DFGla~~  893 (1624)
                      |||++ |+|.+++.... .+++.++..|+.|++.||+|||+.   +|+||||||+|||+     ++++.+||+|||+|+.
T Consensus       112 ~e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~  186 (329)
T 3gbz_A          112 FEYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA  186 (329)
T ss_dssp             EECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred             EecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence            99998 59999997654 689999999999999999999994   59999999999999     4556699999999987


Q ss_pred             cCCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          894 LDGEDSVTQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       894 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ...... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus       187 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  240 (329)
T 3gbz_A          187 FGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPG  240 (329)
T ss_dssp             HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence            653322 2233468999999998876 4589999999999999999999999865


No 440
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.97  E-value=9.4e-33  Score=338.19  Aligned_cols=196  Identities=18%  Similarity=0.286  Sum_probs=162.1

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecc---cchhHHHHHHHH---HHHHhcCCCceeeee-------ee
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQ---LDGAIKSFDAEC---EVLRRVRHRNLVKII-------SS  808 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~~E~---~~l~~l~H~niv~l~-------~~  808 (1624)
                      .++|...+.||+|+||+||+|+. .+|+.||||++...   .....+.|.+|+   +++++++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46788889999999999999996 56999999999743   234557899999   555566899999998       55


Q ss_pred             eccCC-----------------eEEEEEEecCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 047591          809 CSNHG-----------------FKALILEYMPQGSLEKWLYSHKY------TLNIQQRLDIMIDVASALEYLHHGHPTPV  865 (1624)
Q Consensus       809 ~~~~~-----------------~~~lV~Ey~~~gsL~~~l~~~~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~I  865 (1624)
                      +..++                 ..|+||||+ +|+|.+++.....      .+++..+..|+.||++||+|||+.   +|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            54443                 278999999 6899999976431      244688889999999999999995   59


Q ss_pred             EeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCcccccccccccccCccccCCC-----------CCCcchhHHHHHHH
Q 047591          866 IHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEG-----------IVSTCGDVYSFGIL  934 (1624)
Q Consensus       866 iHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~~~k~DvwS~Gvi  934 (1624)
                      +||||||+|||++.++.+||+|||+|+....    ......| +.|+|||++...           .++.++|||||||+
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence            9999999999999999999999999986432    2233467 999999998776           79999999999999


Q ss_pred             HHHHHcCCCCCCc
Q 047591          935 MIETFTRKMPTDE  947 (1624)
Q Consensus       935 l~elltg~~P~~~  947 (1624)
                      +|||+||+.||..
T Consensus       303 l~elltg~~Pf~~  315 (377)
T 3byv_A          303 IYWIWCADLPITK  315 (377)
T ss_dssp             HHHHHHSSCCC--
T ss_pred             HHHHHHCCCCCcc
Confidence            9999999999864


No 441
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.97  E-value=1.2e-31  Score=314.49  Aligned_cols=198  Identities=24%  Similarity=0.378  Sum_probs=172.4

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc------hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD------GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKA  816 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~  816 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++.....      ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            46888899999999999999875 689999999875431      13578999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCC----ceEEEeeeeee
Q 047591          817 LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT----VAHLSDFGISK  892 (1624)
Q Consensus       817 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~----~~kl~DFGla~  892 (1624)
                      +||||+++++|.+++... ..+++.++..++.|++.||+|||+.   +|+||||||+||+++.++    .+||+|||+++
T Consensus        85 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~  160 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH  160 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence            999999999999999764 3689999999999999999999984   599999999999999877    79999999998


Q ss_pred             ccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          893 LLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       893 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .......  .....||+.|+|||++....++.++||||||+++|||+||+.||..
T Consensus       161 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  213 (283)
T 3bhy_A          161 KIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  213 (283)
T ss_dssp             ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             eccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC
Confidence            7654322  2234699999999999888899999999999999999999999865


No 442
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.97  E-value=3.1e-32  Score=329.39  Aligned_cols=200  Identities=20%  Similarity=0.242  Sum_probs=165.3

Q ss_pred             CCCCCcceeecCCccceEEEEec----CCCEEEEEEeecccch-----------hHHHHHHHHHHHHhcCCCceeeeeee
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP----YGMNVAIKVFNLQLDG-----------AIKSFDAECEVLRRVRHRNLVKIISS  808 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~~~  808 (1624)
                      ++|...+.||+|+||+||+|...    ++..||||++......           ..+.+.+|+..++.++||||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            56888899999999999999875    5788999998754321           12347788999999999999999999


Q ss_pred             ecc----CCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCC--c
Q 047591          809 CSN----HGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT--V  882 (1624)
Q Consensus       809 ~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~--~  882 (1624)
                      +..    ....|+||||+ +|+|.+++...+ .+++.++..|+.|++.||+|||+.   +|+||||||+|||++.++  .
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~  191 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ  191 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence            877    67899999999 999999997655 789999999999999999999984   599999999999999887  9


Q ss_pred             eEEEeeeeeeccCCCCCc------ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          883 AHLSDFGISKLLDGEDSV------TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       883 ~kl~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      +||+|||+|+.+......      ......||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus       192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~  263 (345)
T 2v62_A          192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQN  263 (345)
T ss_dssp             EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGG
T ss_pred             EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            999999999876432211      113347999999999998888999999999999999999999999653


No 443
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.97  E-value=5.7e-32  Score=335.62  Aligned_cols=200  Identities=27%  Similarity=0.357  Sum_probs=163.2

Q ss_pred             hcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccc--------hhHHHHHHHHHHHHhcCCCceeeeeeeeccC
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLD--------GAIKSFDAECEVLRRVRHRNLVKIISSCSNH  812 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~  812 (1624)
                      ..++|...+.||+|+||+||+|.. .+++.||||++.....        .....+.+|+++|++++|||||++++++.. 
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence            467899999999999999999986 4689999999875421        122358899999999999999999999865 


Q ss_pred             CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCC---CceEEEeee
Q 047591          813 GFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDD---TVAHLSDFG  889 (1624)
Q Consensus       813 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~---~~~kl~DFG  889 (1624)
                      +..|+|||||++|+|.+++... ..+++.++..|+.|++.||+|||+.   +|+||||||+|||++.+   ..+||+|||
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG  287 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG  287 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred             CceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecc
Confidence            4579999999999999988654 3689999999999999999999984   59999999999999754   459999999


Q ss_pred             eeeccCCCCCcccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          890 ISKLLDGEDSVTQTMTLATFGYMAPEYGS---EGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       890 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      +|+......  ......||+.|+|||++.   ...++.++|||||||++|||+||+.||...
T Consensus       288 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~  347 (419)
T 3i6u_A          288 HSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH  347 (419)
T ss_dssp             TTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             cceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence            998765332  223457999999999874   367889999999999999999999999754


No 444
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97  E-value=9.6e-32  Score=323.42  Aligned_cols=201  Identities=29%  Similarity=0.479  Sum_probs=167.0

Q ss_pred             CCCCcceeecCCccceEEEEecC-----CCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          745 GFSESNLIGAGSFGSVYKATLPY-----GMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       745 ~f~~~~~iG~G~~G~Vy~~~~~~-----g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      +|...+.||+|+||+||+|....     +..||||++..... .....|.+|+.++++++||||+++++++.+.+..++|
T Consensus        45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  124 (333)
T 1mqb_A           45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII  124 (333)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence            45557899999999999998642     24699999975433 3456789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++|+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+||++++++.+||+|||+++......
T Consensus       125 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~  201 (333)
T 1mqb_A          125 TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  201 (333)
T ss_dssp             EECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence            999999999999987766899999999999999999999995   59999999999999999999999999998765432


Q ss_pred             Ccc--cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          899 SVT--QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       899 ~~~--~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ...  .....+|+.|+|||.+....++.++|||||||++|||+| |+.||...
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~  254 (333)
T 1mqb_A          202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL  254 (333)
T ss_dssp             ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             ccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC
Confidence            211  122346889999999988889999999999999999999 99998653


No 445
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97  E-value=8.3e-31  Score=317.11  Aligned_cols=128  Identities=22%  Similarity=0.352  Sum_probs=57.2

Q ss_pred             CCCCcccEEeccCCccCCCccchhccccccceecccccccccCCCccccCCCCCceeecccccccCCCccccccccCCcc
Q 047591          465 GNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCLANLTSLRA  544 (1624)
Q Consensus       465 ~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~L~~N~l~g~iP~~~~~l~~L~~  544 (1624)
                      ..+++|++|+|++|++++..+  +..+++|++|++++|++++ + +.+..+++|+.|++++|++++ + +.+..+++|+.
T Consensus       218 ~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~  291 (347)
T 4fmz_A          218 ANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNS  291 (347)
T ss_dssp             GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSE
T ss_pred             hcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCE
Confidence            334445555555555543222  4445555555555555543 2 234445555555555555543 2 23444455555


Q ss_pred             ccccCccccccCchhhccccccceeecccccccCCCCcccccccccceeeccCCcC
Q 047591          545 LNLSSNRLNSTIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQL  600 (1624)
Q Consensus       545 L~Ls~N~l~g~iP~~~~~l~~L~~ldLs~N~l~g~iP~~l~~l~~L~~L~Ls~N~l  600 (1624)
                      |+|++|++++..|..+..+++|+.|++++|.+++..|  ++.+++|+.|++++|++
T Consensus       292 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i  345 (347)
T 4fmz_A          292 LFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI  345 (347)
T ss_dssp             EECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred             EECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence            5555555544444444444444444444444433222  33344444444444433


No 446
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.97  E-value=6.1e-32  Score=322.35  Aligned_cols=212  Identities=25%  Similarity=0.436  Sum_probs=180.0

Q ss_pred             cCHHHHHhhcCCCCCcceeecCCccceEEEEe------cCCCEEEEEEeecccc-hhHHHHHHHHHHHHhc-CCCceeee
Q 047591          734 ISYQELQRLTDGFSESNLIGAGSFGSVYKATL------PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRV-RHRNLVKI  805 (1624)
Q Consensus       734 ~~~~el~~~t~~f~~~~~iG~G~~G~Vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l  805 (1624)
                      +...+.....++|...+.||+|+||+||+|+.      .+++.||||++..... ...+.+.+|+.+++++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            44455555678899999999999999999974      3568999999975443 3456789999999999 79999999


Q ss_pred             eeeeccCC-eEEEEEEecCCCCHHHHHHhcCCC---------------CCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCc
Q 047591          806 ISSCSNHG-FKALILEYMPQGSLEKWLYSHKYT---------------LNIQQRLDIMIDVASALEYLHHGHPTPVIHCD  869 (1624)
Q Consensus       806 ~~~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~---------------l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrD  869 (1624)
                      ++++...+ ..++||||+++|+|.+++......               +++.++..++.|+++||+|||+.   +|+|||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d  173 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD  173 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence            99987654 589999999999999999865432               78999999999999999999994   599999


Q ss_pred             CCCCCeeeCCCCceEEEeeeeeeccCCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCc
Q 047591          870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDS-VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDE  947 (1624)
Q Consensus       870 lKp~NILld~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~  947 (1624)
                      |||+||+++.++.+||+|||+++....... .......||+.|+|||++....++.++|||||||++|||+| |+.||..
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~  253 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  253 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence            999999999999999999999987654332 22234568999999999888889999999999999999999 9999865


Q ss_pred             c
Q 047591          948 M  948 (1624)
Q Consensus       948 ~  948 (1624)
                      .
T Consensus       254 ~  254 (316)
T 2xir_A          254 V  254 (316)
T ss_dssp             C
T ss_pred             c
Confidence            4


No 447
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.97  E-value=4.1e-32  Score=319.77  Aligned_cols=200  Identities=29%  Similarity=0.476  Sum_probs=160.9

Q ss_pred             cCCCCCcceeecCCccceEEEEecCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      .++|...+.||+|+||+||+|+..  ..||||++....  ....+.|.+|++++++++||||+++++++. .+..++|||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e   99 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ   99 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEE
Confidence            467888999999999999999864  469999987543  234577999999999999999999999764 456799999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC-C
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED-S  899 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~-~  899 (1624)
                      |+++++|.+++......+++.++..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++...... .
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  176 (289)
T 3og7_A          100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS  176 (289)
T ss_dssp             CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred             ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccccccc
Confidence            9999999999987767799999999999999999999984   59999999999999999999999999998654321 1


Q ss_pred             cccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          900 VTQTMTLATFGYMAPEYGS---EGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~---~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      .......||+.|+|||.+.   ...++.++|||||||++|||+||+.||...
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  228 (289)
T 3og7_A          177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI  228 (289)
T ss_dssp             -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCcccc
Confidence            2223346999999999875   567889999999999999999999999754


No 448
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.97  E-value=1.2e-31  Score=323.60  Aligned_cols=214  Identities=24%  Similarity=0.434  Sum_probs=176.3

Q ss_pred             HhhcCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHh--cCCCceeeeeeeeccCC----
Q 047591          740 QRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRR--VRHRNLVKIISSCSNHG----  813 (1624)
Q Consensus       740 ~~~t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----  813 (1624)
                      ....++|...+.||+|+||+||+|+. +|+.||||++...   ..+.+.+|+++++.  ++||||+++++++....    
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence            44567899999999999999999987 5899999998643   33567889999988  78999999999998775    


Q ss_pred             eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEeCcCCCCCeeeCCCCceEEEee
Q 047591          814 FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG-----HPTPVIHCDLKPSNVLLDDDTVAHLSDF  888 (1624)
Q Consensus       814 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~IiHrDlKp~NILld~~~~~kl~DF  888 (1624)
                      ..++||||+++|+|.+++...  .+++.++..++.|++.||+|||..     +..+|+||||||+||++++++.+||+||
T Consensus       114 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df  191 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  191 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred             eeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence            789999999999999999764  589999999999999999999932     1256999999999999999999999999


Q ss_pred             eeeeccCCCCCc---ccccccccccccCccccCCC------CCCcchhHHHHHHHHHHHHcC----------CCCCCccC
Q 047591          889 GISKLLDGEDSV---TQTMTLATFGYMAPEYGSEG------IVSTCGDVYSFGILMIETFTR----------KMPTDEMF  949 (1624)
Q Consensus       889 Gla~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~~------~~~~k~DvwS~Gvil~elltg----------~~P~~~~~  949 (1624)
                      |+++........   ......||+.|+|||++...      .++.++|||||||++|||+||          +.||....
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~  271 (342)
T 1b6c_B          192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV  271 (342)
T ss_dssp             TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence            999876544322   12334799999999987665      234789999999999999999          77876654


Q ss_pred             cCcchHHHHH
Q 047591          950 TGETSLKKWV  959 (1624)
Q Consensus       950 ~~~~~l~~~~  959 (1624)
                      ........+.
T Consensus       272 ~~~~~~~~~~  281 (342)
T 1b6c_B          272 PSDPSVEEMR  281 (342)
T ss_dssp             CSSCCHHHHH
T ss_pred             cCcccHHHHH
Confidence            4443444443


No 449
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.97  E-value=1.6e-32  Score=351.01  Aligned_cols=201  Identities=28%  Similarity=0.472  Sum_probs=174.3

Q ss_pred             cCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEec
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYM  822 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~  822 (1624)
                      .++|...+.||+|+||+||+|.+..+..||||+++.... ..+.|.+|+++|++++|||||+++++|.+ +..|+|||||
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~  343 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM  343 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence            456778899999999999999998888899999975432 34689999999999999999999999976 6689999999


Q ss_pred             CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCcc
Q 047591          823 PQGSLEKWLYSH-KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT  901 (1624)
Q Consensus       823 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~  901 (1624)
                      ++|+|.++++.. ...+++.+++.|+.||++||+|||+.   +||||||||+|||+++++.+||+|||+++.........
T Consensus       344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  420 (535)
T 2h8h_A          344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  420 (535)
T ss_dssp             TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred             cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence            999999999753 24589999999999999999999984   59999999999999999999999999998765332222


Q ss_pred             cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          902 QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       902 ~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      .....+|..|+|||++..+.++.++|||||||++|||+| |+.||..+
T Consensus       421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~  468 (535)
T 2h8h_A          421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM  468 (535)
T ss_dssp             TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred             ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            223457889999999888889999999999999999999 99998754


No 450
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.97  E-value=1.2e-31  Score=325.03  Aligned_cols=201  Identities=25%  Similarity=0.400  Sum_probs=171.9

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCceeeeeeeecc--------
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSCSN--------  811 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------  811 (1624)
                      .++|...+.||+|+||+||+|+. .+|+.||||++.....  .....+.+|++++++++||||+++++++..        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            35788899999999999999987 5789999999865432  234678899999999999999999999876        


Q ss_pred             CCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeee
Q 047591          812 HGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGIS  891 (1624)
Q Consensus       812 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla  891 (1624)
                      .+..++||||+++ +|.+.+......+++.++..|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  171 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA  171 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence            4468999999985 88888877666799999999999999999999984   5999999999999999999999999999


Q ss_pred             eccCCCCC---cccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          892 KLLDGEDS---VTQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       892 ~~~~~~~~---~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      +.......   .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  231 (351)
T 3mi9_A          172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG  231 (351)
T ss_dssp             EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCC
Confidence            87653221   12234578999999998765 5679999999999999999999999875


No 451
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.97  E-value=1.3e-31  Score=322.68  Aligned_cols=199  Identities=23%  Similarity=0.323  Sum_probs=175.8

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ++|...+.||+|+||.||+|+.. +++.||+|++....   ....+.+.+|+.++++++||||+++++++.+.+..|+||
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            56788899999999999999865 58899999987542   234567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||+++++|.+++... ..+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++.......
T Consensus       121 e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  196 (335)
T 2owb_A          121 ELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  196 (335)
T ss_dssp             CCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             ecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence            999999999998764 3689999999999999999999984   599999999999999999999999999987653322


Q ss_pred             cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                       ......||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       197 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  243 (335)
T 2owb_A          197 -RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  243 (335)
T ss_dssp             -CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             -cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence             22335699999999999888899999999999999999999999865


No 452
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.97  E-value=1.2e-31  Score=316.47  Aligned_cols=200  Identities=31%  Similarity=0.446  Sum_probs=169.9

Q ss_pred             CCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEec
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYM  822 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~  822 (1624)
                      +.|....+||+|+||.||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            3455667999999999999986 468999999998765556678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCC-CCceEEEeeeeeeccCCCCC
Q 047591          823 PQGSLEKWLYSHKY--TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD-DTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       823 ~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~-~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ++|+|.+++.....  .+++..+..++.|++.||+|||+.   +|+||||||+||+++. ++.+||+|||+++.......
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~  178 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP  178 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence            99999999986532  456888899999999999999984   5999999999999997 89999999999987654322


Q ss_pred             cccccccccccccCccccCCCC--CCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGI--VSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~--~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                       ......||+.|+|||++..+.  ++.++|||||||++|||+||+.||..
T Consensus       179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  227 (295)
T 2clq_A          179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE  227 (295)
T ss_dssp             ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred             -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence             123346999999999876543  78999999999999999999999864


No 453
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.97  E-value=2.9e-32  Score=326.23  Aligned_cols=211  Identities=25%  Similarity=0.411  Sum_probs=179.9

Q ss_pred             cCHHHHHhhcCCCCCcceeecCCccceEEEEec------CCCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeee
Q 047591          734 ISYQELQRLTDGFSESNLIGAGSFGSVYKATLP------YGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKII  806 (1624)
Q Consensus       734 ~~~~el~~~t~~f~~~~~iG~G~~G~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~  806 (1624)
                      +..++.+...++|...+.||+|+||+||+|...      +++.||||++..... .....|.+|+.++++++||||++++
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            344455666788999999999999999999754      368899999875432 3446789999999999999999999


Q ss_pred             eeeccCCeEEEEEEecCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee
Q 047591          807 SSCSNHGFKALILEYMPQGSLEKWLYSHK---------YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL  877 (1624)
Q Consensus       807 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl  877 (1624)
                      +++.+.+..++||||+++|+|.+++....         ..+++.++..++.|++.||+|||+.   +|+||||||+||++
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli  171 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV  171 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEE
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEE
Confidence            99999999999999999999999997532         3568999999999999999999995   59999999999999


Q ss_pred             CCCCceEEEeeeeeeccCCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCc
Q 047591          878 DDDTVAHLSDFGISKLLDGEDSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDE  947 (1624)
Q Consensus       878 d~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~  947 (1624)
                      +.++.+||+|||+++........ ......||+.|+|||++....++.++|||||||++|||+| |+.||..
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~  243 (322)
T 1p4o_A          172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG  243 (322)
T ss_dssp             CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred             cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc
Confidence            99999999999999876443221 1223467899999999888889999999999999999999 8899865


No 454
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97  E-value=1.1e-32  Score=331.96  Aligned_cols=241  Identities=15%  Similarity=0.188  Sum_probs=181.9

Q ss_pred             CCCCcCCeEeecCceEEEEEEEcCCceEEEEEeccch--------hhHHHHHHHHHHHHHhcC---------CCceeEEE
Q 047591         1335 NGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQE--------DRALKSFDAECEVMRRIR---------HRNLAKIV 1397 (1624)
Q Consensus      1335 ~~f~~~~~lG~G~~G~Vyk~~~~~~~~vAvK~~~~~~--------~~~~~~f~~E~~~l~~l~---------HpNIv~l~ 1397 (1624)
                      ++|...+.||+|+||+||+|+. +|+.||||++....        ....+.+.+|++++++++         |||||++.
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            3456678999999999999988 78999999986542        223478999999999986         66666665


Q ss_pred             ee-----------------ecc-------------CCeeEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q 047591         1398 SS-----------------CSN-------------PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447 (1624)
Q Consensus      1398 g~-----------------~~~-------------~~~~~lV~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gl~y 1447 (1624)
                      +.                 +.+             .+..++|||||++|++.+.+.+  ..+++.++..|+.||+.||+|
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~  176 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAV  176 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHH
Confidence            54                 332             6789999999999977666643  457899999999999999999


Q ss_pred             hh-hcCCCceEEcCCCCCcEEecCCC--------------------cEEEeeecceeecCCCCCcccccccccccccccc
Q 047591         1448 LH-QGYSTSIIHCDLKPSNVLLDDDM--------------------VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE 1506 (1624)
Q Consensus      1448 LH-~~~~~~iiHrDlK~~NILld~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE 1506 (1624)
                      || +   .+||||||||+|||++.++                    .+||+|||+|+.....      ..+||+.|||||
T Consensus       177 lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE  247 (336)
T 2vuw_A          177 AEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDED  247 (336)
T ss_dssp             HHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSG
T ss_pred             HHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChh
Confidence            99 6   7899999999999999887                    9999999999876532      347999999999


Q ss_pred             ccCCCCcCcccchHHHHHH-HHHHHcCCCCCCCCCccchhhhhhhhhcCChhHHHHHhhhccCCchHHHHHHHHHhHHHH
Q 047591         1507 YGSEGIVSTSGDVYSFGIL-MMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSV 1585 (1624)
Q Consensus      1507 ~~~~~~~~~k~DV~SfGvi-l~Elltg~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 1585 (1624)
                      ++.+.. +.++||||+|++ .+++++|..||.+.        .|....    ...++.........  .......++..+
T Consensus       248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~s~~~  312 (336)
T 2vuw_A          248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYL----TDKMLKQMTFKTKC--NTPAMKQIKRKI  312 (336)
T ss_dssp             GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHH----HHHHHHTCCCSSCC--CSHHHHHHHHHH
T ss_pred             hhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHH----HHhhhhhhccCccc--chhhhhhcCHHH
Confidence            987665 899999998877 77888899887421        121110    01111110111100  111234567789


Q ss_pred             HHHHHHccccCCCCCCCHHHHH
Q 047591         1586 MSLALKCSEEIPEERMNVKDAL 1607 (1624)
Q Consensus      1586 ~~l~~~C~~~~P~~RPt~~evl 1607 (1624)
                      .+++.+|++.+     |++|++
T Consensus       313 ~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          313 QEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHGGGSS-----SHHHHH
T ss_pred             HHHHHHHhccC-----CHHHHH
Confidence            99999999965     888887


No 455
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.97  E-value=9.8e-32  Score=319.00  Aligned_cols=198  Identities=24%  Similarity=0.386  Sum_probs=172.7

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            457888899999999999999865 7899999999865444456789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee---CCCCceEEEeeeeeeccCCCC
Q 047591          822 MPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl---d~~~~~kl~DFGla~~~~~~~  898 (1624)
                      +++|+|.+++...+ .+++.++..++.|++.||+|||+.   +|+||||||+||++   ++++.+||+|||+++..... 
T Consensus        88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-  162 (304)
T 2jam_A           88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-  162 (304)
T ss_dssp             CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred             CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence            99999999997654 689999999999999999999984   59999999999999   78899999999999865432 


Q ss_pred             CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                        ......||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  209 (304)
T 2jam_A          163 --IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE  209 (304)
T ss_dssp             --TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             --ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence              22234699999999999988999999999999999999999999865


No 456
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97  E-value=8.1e-32  Score=328.30  Aligned_cols=196  Identities=26%  Similarity=0.366  Sum_probs=164.7

Q ss_pred             hcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCC-----
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHG-----  813 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----  813 (1624)
                      ..++|...+.||+|+||+||+|.. .+|+.||||++....  ....+.+.+|++++++++||||+++++++...+     
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            356788899999999999999986 479999999985432  234567899999999999999999999987653     


Q ss_pred             -eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeee
Q 047591          814 -FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK  892 (1624)
Q Consensus       814 -~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~  892 (1624)
                       ..|+||||+ +++|.+++...  .+++..+..++.|+++||+|||+.   +|+||||||+|||++.++.+||+|||+|+
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  176 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR  176 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             ceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence             459999999 78999999763  588999999999999999999985   59999999999999999999999999999


Q ss_pred             ccCCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          893 LLDGEDSVTQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       893 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .....    .+...||+.|+|||++.. ..++.++||||+||++|||+||+.||..
T Consensus       177 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  228 (367)
T 1cm8_A          177 QADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG  228 (367)
T ss_dssp             ECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence            76432    233478999999998765 6789999999999999999999999864


No 457
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97  E-value=7.3e-32  Score=326.30  Aligned_cols=202  Identities=26%  Similarity=0.404  Sum_probs=168.8

Q ss_pred             hhcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc-----hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCe
Q 047591          741 RLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD-----GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGF  814 (1624)
Q Consensus       741 ~~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~  814 (1624)
                      ...++|...+.||+|+||+||+|+.. +|+.||||++.....     ...+.+.+|++++++++||||+++++++.+.+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            34578999999999999999999864 689999999864321     123568899999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeecc
Q 047591          815 KALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL  894 (1624)
Q Consensus       815 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~  894 (1624)
                      .++||||+++ +|.+++......+++.++..++.|+++||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF  162 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence            9999999986 89999987766789999999999999999999995   5999999999999999999999999999876


Q ss_pred             CCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          895 DGEDSVTQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       895 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus       163 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~  215 (346)
T 1ua2_A          163 GSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG  215 (346)
T ss_dssp             TSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            54322 2234579999999998865 4589999999999999999999999864


No 458
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.97  E-value=1.8e-31  Score=317.67  Aligned_cols=201  Identities=26%  Similarity=0.388  Sum_probs=163.9

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      .++|...+.||+|+||.||+|.. .+|+.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            35688889999999999999986 578999999987532   33456789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccC
Q 047591          819 LEYMPQGSLEKWLYS---HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD  895 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~  895 (1624)
                      |||+++|+|.+++..   ....+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++...
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            999999999999864   244689999999999999999999984   59999999999999999999999999998765


Q ss_pred             CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          896 GEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       896 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .... ......||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~  238 (310)
T 2wqm_A          188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG  238 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred             CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence            4322 12234689999999999888999999999999999999999999864


No 459
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97  E-value=8.7e-32  Score=316.64  Aligned_cols=201  Identities=27%  Similarity=0.459  Sum_probs=172.6

Q ss_pred             CCCCCcc-eeecCCccceEEEEec---CCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          744 DGFSESN-LIGAGSFGSVYKATLP---YGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       744 ~~f~~~~-~iG~G~~G~Vy~~~~~---~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      ++|...+ .||+|+||.||+|...   ++..||||++.... ....+.+.+|++++++++||||+++++++ +.+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            3444555 8999999999999753   57889999997643 33467899999999999999999999999 45568999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++|+|.+++......+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++......
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~  164 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD  164 (287)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred             EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence            999999999999987666799999999999999999999984   59999999999999999999999999998775443


Q ss_pred             Ccc--cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          899 SVT--QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       899 ~~~--~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ...  .....||+.|+|||++....++.++|||||||++|||+| |+.||...
T Consensus       165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  217 (287)
T 1u59_A          165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM  217 (287)
T ss_dssp             CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence            322  223357899999999888889999999999999999999 99998653


No 460
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.97  E-value=9.5e-32  Score=322.57  Aligned_cols=201  Identities=28%  Similarity=0.441  Sum_probs=166.0

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCC----EEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGM----NVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      ++|+..+.||+|+||+||+|+.. +++    +||+|.+.... ....+.+.+|+.++++++||||++++++|.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            57888999999999999999853 454    35777765332 335678999999999999999999999998765 789


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      |+||+++|+|.+++......+++..+..|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~  170 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence            9999999999999988777899999999999999999999984   5999999999999999999999999999876543


Q ss_pred             CCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          898 DSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       898 ~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ... ......||+.|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~  223 (327)
T 3lzb_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI  223 (327)
T ss_dssp             ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            222 2223457889999999988899999999999999999999 99999754


No 461
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.97  E-value=4e-32  Score=327.11  Aligned_cols=198  Identities=31%  Similarity=0.454  Sum_probs=160.9

Q ss_pred             cCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHH--HHhcCCCceeeeeeeec-----cCCeE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEV--LRRVRHRNLVKIISSCS-----NHGFK  815 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~-----~~~~~  815 (1624)
                      .++|...+.||+|+||+||+|+. +++.||||++....   ...+..|.++  +..++||||+++++++.     .....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            36788899999999999999976 68999999997543   2344455555  44589999999997542     33467


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCC------CCCeEeCcCCCCCeeeCCCCceEEEeee
Q 047591          816 ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGH------PTPVIHCDLKPSNVLLDDDTVAHLSDFG  889 (1624)
Q Consensus       816 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~IiHrDlKp~NILld~~~~~kl~DFG  889 (1624)
                      ++||||+++|+|.+++....  .++..+.+|+.|+++||+|||+..      .++|+||||||+|||++.++.+||+|||
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG  165 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG  165 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred             EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence            89999999999999997654  588999999999999999999852      1269999999999999999999999999


Q ss_pred             eeeccCCCCC-------cccccccccccccCccccCC-------CCCCcchhHHHHHHHHHHHHcCCCCCC
Q 047591          890 ISKLLDGEDS-------VTQTMTLATFGYMAPEYGSE-------GIVSTCGDVYSFGILMIETFTRKMPTD  946 (1624)
Q Consensus       890 la~~~~~~~~-------~~~~~~~gt~~Y~aPE~~~~-------~~~~~k~DvwS~Gvil~elltg~~P~~  946 (1624)
                      +|+.......       .......||+.|+|||++.+       ..++.++|||||||++|||+||+.|+.
T Consensus       166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~  236 (336)
T 3g2f_A          166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLF  236 (336)
T ss_dssp             TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGS
T ss_pred             ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCC
Confidence            9987654321       11223469999999998876       456789999999999999999987764


No 462
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.97  E-value=3.9e-32  Score=334.89  Aligned_cols=200  Identities=26%  Similarity=0.403  Sum_probs=171.9

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCC--eEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHG--FKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~  819 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            56888899999999999999875 58999999997543 234567889999999999999999999987655  789999


Q ss_pred             EecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee----CCCCceEEEeeeeeec
Q 047591          820 EYMPQGSLEKWLYSHKY--TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL----DDDTVAHLSDFGISKL  893 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl----d~~~~~kl~DFGla~~  893 (1624)
                      ||+++|+|.+++.....  .+++.++..|+.|++.||+|||+.   +|+||||||+|||+    +.++.+||+|||+|+.
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence            99999999999975432  389999999999999999999994   59999999999999    7888899999999987


Q ss_pred             cCCCCCcccccccccccccCccccCC--------CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          894 LDGEDSVTQTMTLATFGYMAPEYGSE--------GIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       894 ~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ......  .....||+.|+|||++..        ..++.++|||||||++|||+||+.||...
T Consensus       166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~  226 (396)
T 4eut_A          166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF  226 (396)
T ss_dssp             CCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred             ccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            654322  223469999999998654        56788999999999999999999998654


No 463
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.97  E-value=5.3e-32  Score=329.42  Aligned_cols=199  Identities=27%  Similarity=0.397  Sum_probs=174.9

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      .++|...+.||+|+||+||+|... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            357888999999999999999875 689999999976533 345678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCc
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV  900 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~  900 (1624)
                      |+++|+|.+++.... .+++..+..++.|++.||+|||+.+  +|+||||||+||+++.++.+||+|||+++.....   
T Consensus       112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---  185 (360)
T 3eqc_A          112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---  185 (360)
T ss_dssp             CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred             CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence            999999999997654 6899999999999999999999842  4999999999999999999999999999765322   


Q ss_pred             ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       901 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ......||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  232 (360)
T 3eqc_A          186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  232 (360)
T ss_dssp             C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred             cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            12234699999999999988999999999999999999999999865


No 464
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97  E-value=3.9e-33  Score=330.43  Aligned_cols=193  Identities=26%  Similarity=0.440  Sum_probs=150.9

Q ss_pred             cCCCCCcceeecCCccceEEEEecCCCEEEEEEeecccchhHHHHHHHHHHHHh--cCCCceeeeeeeeccCC----eEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRR--VRHRNLVKIISSCSNHG----FKA  816 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~  816 (1624)
                      .++|...+.||+|+||+||+|+.. |+.||||++...   ..+.+.+|.+++..  ++||||+++++++....    ..+
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   77 (303)
T 3gxj_A            2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred             cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence            357889999999999999999874 899999998643   33567788888887  79999999999998776    789


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEeCcCCCCCeeeCCCCceEEEeeeee
Q 047591          817 LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG-----HPTPVIHCDLKPSNVLLDDDTVAHLSDFGIS  891 (1624)
Q Consensus       817 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~IiHrDlKp~NILld~~~~~kl~DFGla  891 (1624)
                      +||||+++|+|.+++...  .+++.++..++.|++.||+|||..     +..+|+||||||+|||++.++.+||+|||+|
T Consensus        78 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a  155 (303)
T 3gxj_A           78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred             EEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence            999999999999999754  578888999999999999999932     1357999999999999999999999999999


Q ss_pred             eccCCCCCcc---cccccccccccCccccCCC------CCCcchhHHHHHHHHHHHHcC
Q 047591          892 KLLDGEDSVT---QTMTLATFGYMAPEYGSEG------IVSTCGDVYSFGILMIETFTR  941 (1624)
Q Consensus       892 ~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~~~k~DvwS~Gvil~elltg  941 (1624)
                      +.........   .....||+.|+|||++...      .++.++|||||||++|||+||
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g  214 (303)
T 3gxj_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR  214 (303)
T ss_dssp             CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGG
T ss_pred             eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhc
Confidence            8765433221   1234699999999988765      445789999999999999999


No 465
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.97  E-value=1.8e-31  Score=314.94  Aligned_cols=202  Identities=21%  Similarity=0.320  Sum_probs=170.3

Q ss_pred             hcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeee-ccCCeEEEEE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSC-SNHGFKALIL  819 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lV~  819 (1624)
                      ..++|...+.||+|+||+||+|+. .+++.||||++.....  .+.+.+|++++++++|++++..++++ .+.+..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            467899999999999999999986 5789999998764432  24578999999999988877777665 6677889999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee---CCCCceEEEeeeeeeccCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDG  896 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl---d~~~~~kl~DFGla~~~~~  896 (1624)
                      ||+ +|+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+|||+   ++++.+||+|||+++....
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~  160 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  160 (296)
T ss_dssp             ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence            999 9999999987666799999999999999999999985   59999999999999   7889999999999987754


Q ss_pred             CCCc------ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCccC
Q 047591          897 EDSV------TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMF  949 (1624)
Q Consensus       897 ~~~~------~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~~  949 (1624)
                      ....      ......||+.|+|||.+....++.++|||||||++|||+||+.||....
T Consensus       161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  219 (296)
T 4hgt_A          161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK  219 (296)
T ss_dssp             TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence            4321      1224579999999999998899999999999999999999999997643


No 466
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.97  E-value=2e-31  Score=312.93  Aligned_cols=197  Identities=28%  Similarity=0.423  Sum_probs=174.6

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      ++|...+.||+|+||.||+|+.. +++.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            56888899999999999999865 57899999986432   223467899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||+++|+|.+++.... .+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++...... 
T Consensus        94 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-  168 (284)
T 2vgo_A           94 EFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-  168 (284)
T ss_dssp             CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC-
T ss_pred             EeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcccc-
Confidence            9999999999997654 689999999999999999999984   59999999999999999999999999997654322 


Q ss_pred             cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                        .....||+.|+|||++....++.++||||||+++|||+||+.||..
T Consensus       169 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  214 (284)
T 2vgo_A          169 --RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS  214 (284)
T ss_dssp             --BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             --cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC
Confidence              2234699999999999888899999999999999999999999864


No 467
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.97  E-value=7e-32  Score=319.71  Aligned_cols=203  Identities=27%  Similarity=0.381  Sum_probs=171.9

Q ss_pred             hcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      ..++|+..+.||+|+||+||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++...+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            3467888899999999999999875 589999999976655566789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCc
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV  900 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~  900 (1624)
                      |+++|+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++...... .
T Consensus        97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  172 (302)
T 2j7t_A           97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-Q  172 (302)
T ss_dssp             CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-H
T ss_pred             eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc-c
Confidence            9999999999987666799999999999999999999984   59999999999999999999999999976432111 1


Q ss_pred             ccccccccccccCcccc-----CCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          901 TQTMTLATFGYMAPEYG-----SEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       901 ~~~~~~gt~~Y~aPE~~-----~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ......||+.|+|||++     ....++.++|||||||++|||+||+.||...
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  225 (302)
T 2j7t_A          173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL  225 (302)
T ss_dssp             C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC
Confidence            11234689999999987     4667899999999999999999999998653


No 468
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.97  E-value=4.8e-32  Score=331.23  Aligned_cols=197  Identities=11%  Similarity=0.137  Sum_probs=153.8

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc---hhHHHHHHHHHHHHhc--CCCceeeee-------eeec
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD---GAIKSFDAECEVLRRV--RHRNLVKII-------SSCS  810 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l--~H~niv~l~-------~~~~  810 (1624)
                      ..|...+.||+|+||+||+|+.. +|+.||||++.....   ...+.+.+|+.+++.+  +||||++++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            45778899999999999999864 789999999986542   3345678885555444  699988865       3332


Q ss_pred             cC-----------------CeEEEEEEecCCCCHHHHHHhcCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCeEe
Q 047591          811 NH-----------------GFKALILEYMPQGSLEKWLYSHKYTLNIQQR------LDIMIDVASALEYLHHGHPTPVIH  867 (1624)
Q Consensus       811 ~~-----------------~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~IiH  867 (1624)
                      ..                 ...|+|||||+ |+|.+++...+..+++..+      ..++.|+++||+|||+.   +|+|
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivH  217 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVH  217 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCcc
Confidence            22                 34799999999 8999999875545666666      78889999999999984   5999


Q ss_pred             CcCCCCCeeeCCCCceEEEeeeeeeccCCCCCcccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHcCCCCC
Q 047591          868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE--GIVSTCGDVYSFGILMIETFTRKMPT  945 (1624)
Q Consensus       868 rDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~k~DvwS~Gvil~elltg~~P~  945 (1624)
                      |||||+|||++.++.+||+|||+|+.....    .....+|+.|+|||++..  ..++.++|||||||++|||+||+.||
T Consensus       218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf  293 (371)
T 3q60_A          218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF  293 (371)
T ss_dssp             TTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred             CcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999976432    113457899999999877  67899999999999999999999999


Q ss_pred             Ccc
Q 047591          946 DEM  948 (1624)
Q Consensus       946 ~~~  948 (1624)
                      ...
T Consensus       294 ~~~  296 (371)
T 3q60_A          294 GLV  296 (371)
T ss_dssp             TBC
T ss_pred             CCc
Confidence            764


No 469
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97  E-value=1.9e-31  Score=315.20  Aligned_cols=198  Identities=25%  Similarity=0.388  Sum_probs=168.4

Q ss_pred             CCCcceeecCCccceEEEEec-CC---CEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeE-EEEE
Q 047591          746 FSESNLIGAGSFGSVYKATLP-YG---MNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFK-ALIL  819 (1624)
Q Consensus       746 f~~~~~iG~G~~G~Vy~~~~~-~g---~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~lV~  819 (1624)
                      |...+.||+|+||+||+|... ++   ..||||++..... ...+.|.+|+.++++++||||+++++++.+.+.. ++||
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            444588999999999999853 22   3799999875433 3457899999999999999999999999876654 9999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      ||+.+|+|.+++......+++.++..|+.|++.||+|||+.   +|+||||||+||++++++.+||+|||+++.......
T Consensus       103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  179 (298)
T 3pls_A          103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREY  179 (298)
T ss_dssp             CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred             ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence            99999999999987667789999999999999999999995   599999999999999999999999999986643221


Q ss_pred             ---cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCC
Q 047591          900 ---VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTD  946 (1624)
Q Consensus       900 ---~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~  946 (1624)
                         .......+|+.|+|||......++.++|||||||++|||+||+.|+.
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~  229 (298)
T 3pls_A          180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY  229 (298)
T ss_dssp             GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred             cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCC
Confidence               11223468899999999998899999999999999999999766643


No 470
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97  E-value=5.5e-31  Score=316.68  Aligned_cols=218  Identities=22%  Similarity=0.300  Sum_probs=124.4

Q ss_pred             CCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCcccccccccccccccccCcccccccccceec
Q 047591          138 RLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYL  217 (1624)
Q Consensus       138 ~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~L  217 (1624)
                      +|+.+++++|.++ .+|..+   .++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus        34 ~l~~l~~~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L  109 (332)
T 2ft3_A           34 HLRVVQCSDLGLK-AVPKEI---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI  109 (332)
T ss_dssp             ETTEEECCSSCCS-SCCSCC---CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred             cCCEEECCCCCcc-ccCCCC---CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence            5777777777776 455544   246677777777777655666777777777777777777666666667777777777


Q ss_pred             cCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEeeccccccc--CcCCccccccCcCCeeeccCCcc
Q 047591          218 NGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTT--GRIPKDIGNCTLLNYLGLRDNQL  295 (1624)
Q Consensus       218 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~--g~ip~~~~~l~~L~~L~Ls~N~l  295 (1624)
                      ++|+++ .+|..+.  ++|++|++++|+++ .+|...+..+++|++|++++|.++  +..|..++.+ +|+.|+      
T Consensus       110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~------  178 (332)
T 2ft3_A          110 SKNHLV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLR------  178 (332)
T ss_dssp             CSSCCC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCB------
T ss_pred             CCCcCC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEE------
Confidence            777666 4555444  45555555555554 344444444455555555554443  2333344333 444444      


Q ss_pred             cccCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCcc
Q 047591          296 TDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNL  375 (1624)
Q Consensus       296 ~~l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~  375 (1624)
                                                +++|++++ +|..++   ++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus       179 --------------------------l~~n~l~~-l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~  228 (332)
T 2ft3_A          179 --------------------------ISEAKLTG-IPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQ  228 (332)
T ss_dssp             --------------------------CCSSBCSS-CCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSC
T ss_pred             --------------------------CcCCCCCc-cCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCc
Confidence                                      44444432 343332   455566666666665555566666666666666666


Q ss_pred             ccccCcccccccccccEEEcccccc
Q 047591          376 FSGLVANTFGNCRQLQILNLAYSQL  400 (1624)
Q Consensus       376 l~g~~~~~f~~l~~L~~L~L~~N~l  400 (1624)
                      +++.++..|+.+++|++|+|++|++
T Consensus       229 l~~~~~~~~~~l~~L~~L~L~~N~l  253 (332)
T 2ft3_A          229 IRMIENGSLSFLPTLRELHLDNNKL  253 (332)
T ss_dssp             CCCCCTTGGGGCTTCCEEECCSSCC
T ss_pred             CCcCChhHhhCCCCCCEEECCCCcC
Confidence            6655555555555555555554444


No 471
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.97  E-value=2.7e-31  Score=312.90  Aligned_cols=197  Identities=27%  Similarity=0.417  Sum_probs=168.4

Q ss_pred             CCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeecc----CCeEEEE
Q 047591          746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSN----HGFKALI  818 (1624)
Q Consensus       746 f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV  818 (1624)
                      |...+.||+|+||+||+|.. .++..||+|++....  ....+.+.+|+.++++++||||+++++++..    ....++|
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            55667899999999999986 468899999987543  3345678999999999999999999998764    4568999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeC-CCCceEEEeeeeeeccCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLD-DDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld-~~~~~kl~DFGla~~~~~~  897 (1624)
                      |||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ .+|+||||||+||+++ +++.+||+|||+++.....
T Consensus       108 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~  185 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS  185 (290)
T ss_dssp             EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred             EEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence            99999999999997643 6899999999999999999999854 3499999999999998 7899999999999765433


Q ss_pred             CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       898 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      .   .....||+.|+|||++. +.++.++|||||||++|||+||+.||...
T Consensus       186 ~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~  232 (290)
T 1t4h_A          186 F---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC  232 (290)
T ss_dssp             S---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             c---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCc
Confidence            2   22346999999999876 45899999999999999999999998653


No 472
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.97  E-value=3.4e-31  Score=314.07  Aligned_cols=199  Identities=30%  Similarity=0.414  Sum_probs=176.6

Q ss_pred             CCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEe
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL-DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEY  821 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey  821 (1624)
                      +.|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            5688889999999999999985 468999999997554 34467899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCcc
Q 047591          822 MPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT  901 (1624)
Q Consensus       822 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~  901 (1624)
                      +++++|.+++..  ..+++.++..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++....... .
T Consensus       102 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~  175 (303)
T 3a7i_A          102 LGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-K  175 (303)
T ss_dssp             CTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-C
T ss_pred             CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc-c
Confidence            999999999864  3689999999999999999999994   599999999999999999999999999987654332 2


Q ss_pred             cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          902 QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       902 ~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      .....||+.|+|||++....++.++|||||||++|||+||+.||...
T Consensus       176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  222 (303)
T 3a7i_A          176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL  222 (303)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc
Confidence            23346999999999998889999999999999999999999998653


No 473
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.97  E-value=5.3e-32  Score=328.36  Aligned_cols=197  Identities=16%  Similarity=0.214  Sum_probs=168.9

Q ss_pred             CCCCCcceeecCCccceEEEEecC---------CCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceee----------
Q 047591          744 DGFSESNLIGAGSFGSVYKATLPY---------GMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK----------  804 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~~---------g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~----------  804 (1624)
                      ++|...+.||+|+||+||+|+...         ++.||||++...     +.+.+|++++++++|||||+          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            578888999999999999998753         789999998743     45789999999999999998          


Q ss_pred             -----eeeeecc-CCeEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee
Q 047591          805 -----IISSCSN-HGFKALILEYMPQGSLEKWLYSH-KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL  877 (1624)
Q Consensus       805 -----l~~~~~~-~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl  877 (1624)
                           +++++.. +...|+||||+ +|+|.+++... ...+++.++..|+.|++.||+|||+.   +|+||||||+|||+
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~  192 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFV  192 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEE
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEE
Confidence                 5666655 67889999999 99999999875 34799999999999999999999995   59999999999999


Q ss_pred             CCCC--ceEEEeeeeeeccCCCCCc------ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCccC
Q 047591          878 DDDT--VAHLSDFGISKLLDGEDSV------TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMF  949 (1624)
Q Consensus       878 d~~~--~~kl~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~~  949 (1624)
                      +.++  .+||+|||+++........      ......||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus       193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  272 (352)
T 2jii_A          193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL  272 (352)
T ss_dssp             ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence            9998  8999999999876533211      1133479999999999988899999999999999999999999997644


No 474
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.97  E-value=3.1e-31  Score=316.11  Aligned_cols=200  Identities=29%  Similarity=0.388  Sum_probs=172.6

Q ss_pred             hcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      ..++|...+.||+|+||.||+|... +|+.||||++....  ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            4567888999999999999999875 58999999997543  34678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCc
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV  900 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~  900 (1624)
                      |+++|+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++....... 
T Consensus       105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-  180 (314)
T 3com_A          105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-  180 (314)
T ss_dssp             CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-
Confidence            9999999999986666799999999999999999999984   599999999999999999999999999987654322 


Q ss_pred             ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       901 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ......||+.|+|||++....++.++||||||+++|||+||+.||..
T Consensus       181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  227 (314)
T 3com_A          181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD  227 (314)
T ss_dssp             CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence            22334699999999999888899999999999999999999999865


No 475
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.97  E-value=7.1e-32  Score=315.81  Aligned_cols=205  Identities=25%  Similarity=0.376  Sum_probs=171.7

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeee--ccCCeEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSC--SNHGFKAL  817 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~--~~~~~~~l  817 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||++....  ....+.+.+|++++++++||||+++++++  ......++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            357888899999999999999875 68999999997543  23456789999999999999999999987  45678999


Q ss_pred             EEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeEeCcCCCCCeeeCCCCceEEEeeeeee
Q 047591          818 ILEYMPQGSLEKWLYSHK---YTLNIQQRLDIMIDVASALEYLHHGH--PTPVIHCDLKPSNVLLDDDTVAHLSDFGISK  892 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~IiHrDlKp~NILld~~~~~kl~DFGla~  892 (1624)
                      ||||+++|+|.+++....   ..+++.++..++.|++.||+|||+.+  ..+|+||||||+||++++++.+||+|||+++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            999999999999997532   34899999999999999999999854  1349999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          893 LLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       893 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ....... ......||+.|+|||.+....++.++||||||+++|||+||+.||...
T Consensus       165 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  219 (279)
T 2w5a_A          165 ILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF  219 (279)
T ss_dssp             HC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             eeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc
Confidence            7654322 122346899999999988888999999999999999999999998753


No 476
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.97  E-value=1e-31  Score=349.01  Aligned_cols=194  Identities=29%  Similarity=0.458  Sum_probs=164.1

Q ss_pred             ceeecCCccceEEEEec---CCCEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEEecCC
Q 047591          750 NLIGAGSFGSVYKATLP---YGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQ  824 (1624)
Q Consensus       750 ~~iG~G~~G~Vy~~~~~---~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~  824 (1624)
                      +.||+|+||+||+|.+.   .++.||||+++....  ...++|.+|+++|++++|||||+++++|.. +..++|||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            57999999999999653   467899999975432  345789999999999999999999999975 457999999999


Q ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCc--cc
Q 047591          825 GSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV--TQ  902 (1624)
Q Consensus       825 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~--~~  902 (1624)
                      |+|.+++... ..+++.++..|+.||+.||+|||+.   +||||||||+|||+++++.+||+|||+|+........  ..
T Consensus       454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~  529 (635)
T 4fl3_A          454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  529 (635)
T ss_dssp             EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred             CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence            9999999764 3689999999999999999999984   5999999999999999999999999999987544322  22


Q ss_pred             ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       903 ~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      ....||+.|+|||++....++.++|||||||++|||+| |+.||...
T Consensus       530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~  576 (635)
T 4fl3_A          530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM  576 (635)
T ss_dssp             -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            33457889999999988899999999999999999999 99999754


No 477
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.97  E-value=2e-31  Score=338.24  Aligned_cols=198  Identities=24%  Similarity=0.377  Sum_probs=168.8

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      .+.|...+.||+|+||+||+|+.. ++..||||++....  ......+.+|+.++++++|||||+++++|.+....|+||
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            356888899999999999999865 68999999987543  233567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCC---CCceEEEeeeeeeccCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDG  896 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~---~~~~kl~DFGla~~~~~  896 (1624)
                      |||++|+|.+++.... .+++.++..|+.|+++||+|||+.   +|+||||||+|||++.   ++.+||+|||+|+....
T Consensus       116 e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~  191 (494)
T 3lij_A          116 ECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN  191 (494)
T ss_dssp             ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred             ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence            9999999999987653 689999999999999999999984   5999999999999976   45599999999988754


Q ss_pred             CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          897 EDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       897 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ...  ....+||+.|+|||++. +.++.++||||+||++|||++|+.||..
T Consensus       192 ~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~  239 (494)
T 3lij_A          192 QKK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG  239 (494)
T ss_dssp             TBC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             Ccc--ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence            322  23357999999999876 5689999999999999999999999865


No 478
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97  E-value=1.7e-30  Score=312.42  Aligned_cols=291  Identities=22%  Similarity=0.307  Sum_probs=237.4

Q ss_pred             CCccceeeEecCCCCcEEEEecCCCCCCccCCccccCCCcccEEEecCCCccccCCcccCCCCCCcEEEccCCCCCCccc
Q 047591           75 SVCNWVGVTCGSRHGRVTDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLF  154 (1624)
Q Consensus        75 ~~C~W~Gv~C~~~~~~v~~l~l~~~~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~~  154 (1624)
                      +.|.|+.+.|..            +++. .+|..+.  ++|++|+|++|++++..|..|..+++|++|+|++|++++ ++
T Consensus        31 c~c~l~~l~~~~------------~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~   94 (332)
T 2ft3_A           31 CHCHLRVVQCSD------------LGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK-IH   94 (332)
T ss_dssp             CEEETTEEECCS------------SCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE-EC
T ss_pred             CcccCCEEECCC------------CCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCc-cC
Confidence            446677666643            3343 5676664  689999999999998888899999999999999999986 44


Q ss_pred             hhhhccCCCcCEEEccCCcccccCCccccCCCcccccccccccccccccCcccccccccceeccCCcCC--CCCCCcccc
Q 047591          155 DDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQ--GEFPPTIFN  232 (1624)
Q Consensus       155 ~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~  232 (1624)
                      +..+.++++|++|+|++|+++ .+|..+.  ++|++|++++|++++..+..|+++++|++|++++|+++  +..|..+..
T Consensus        95 ~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~  171 (332)
T 2ft3_A           95 EKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG  171 (332)
T ss_dssp             GGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCS
T ss_pred             HhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccC
Confidence            556688999999999999999 6888776  89999999999999666667999999999999999996  477888888


Q ss_pred             cCccchheeccccccCCCCccccccCCCCcEeecccccccCcCCccccccCcCCeeeccCCcccccCccccccccccccc
Q 047591          233 VSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIF  312 (1624)
Q Consensus       233 l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~l~~n~l~g~ip~~~~  312 (1624)
                      + +|++|++++|+++ .+|..++   ++|++|++++|.+++..|..+..+++|+.|+|++|++.+        ..|..+.
T Consensus       172 l-~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~--------~~~~~~~  238 (332)
T 2ft3_A          172 L-KLNYLRISEAKLT-GIPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM--------IENGSLS  238 (332)
T ss_dssp             C-CCSCCBCCSSBCS-SCCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC--------CCTTGGG
T ss_pred             C-ccCEEECcCCCCC-ccCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc--------CChhHhh
Confidence            8 9999999999998 4887664   689999999999999988999999999999999887654        3455677


Q ss_pred             cCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCC------CCCcEEecCCcccc--ccCcccc
Q 047591          313 NNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNA------SKLTVLELSRNLFS--GLVANTF  384 (1624)
Q Consensus       313 ~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l------~~L~~L~Ls~N~l~--g~~~~~f  384 (1624)
                      .+.+|+.|+|++|+++ .+|..+. .+++|++|+|++|++++..+..|+..      .+|+.|++++|.+.  +..|..|
T Consensus       239 ~l~~L~~L~L~~N~l~-~lp~~l~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~  316 (332)
T 2ft3_A          239 FLPTLRELHLDNNKLS-RVPAGLP-DLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATF  316 (332)
T ss_dssp             GCTTCCEEECCSSCCC-BCCTTGG-GCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGG
T ss_pred             CCCCCCEEECCCCcCe-ecChhhh-cCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccc
Confidence            7888888888888888 7887764 68888888888888887777766653      56788888888877  6677778


Q ss_pred             cccccccEEEccccc
Q 047591          385 GNCRQLQILNLAYSQ  399 (1624)
Q Consensus       385 ~~l~~L~~L~L~~N~  399 (1624)
                      ..+++|+.|+|++|+
T Consensus       317 ~~l~~L~~l~l~~n~  331 (332)
T 2ft3_A          317 RCVTDRLAIQFGNYK  331 (332)
T ss_dssp             TTBCCSTTEEC----
T ss_pred             cccchhhhhhccccc
Confidence            888888888877663


No 479
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.97  E-value=2.3e-31  Score=312.50  Aligned_cols=197  Identities=21%  Similarity=0.309  Sum_probs=169.7

Q ss_pred             hcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc--chhHHHHHHHHHHHHhc-CCCceeeeeeeeccCCeEEE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRV-RHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l  817 (1624)
                      .+++|...+.||+|+||+||+|... +++.||||++....  ......+.+|+..+.++ +||||+++++++.+++..++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            3467888999999999999999875 79999999987543  33456788999999999 99999999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCC--------------
Q 047591          818 ILEYMPQGSLEKWLYSHK---YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDD--------------  880 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~--------------  880 (1624)
                      ||||+++|+|.+++....   ..+++.++..|+.|+++||+|||+.   +|+||||||+||+++.+              
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred             EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence            999999999999997642   4689999999999999999999994   59999999999999844              


Q ss_pred             -----CceEEEeeeeeeccCCCCCcccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHcCCCCCC
Q 047591          881 -----TVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEG-IVSTCGDVYSFGILMIETFTRKMPTD  946 (1624)
Q Consensus       881 -----~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DvwS~Gvil~elltg~~P~~  946 (1624)
                           ..+||+|||+++......     ...||+.|+|||.+... .++.++|||||||++|||++|+.|+.
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  232 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR  232 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred             ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence                 478999999998765432     23599999999988765 56789999999999999999987753


No 480
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.97  E-value=2.3e-31  Score=314.26  Aligned_cols=201  Identities=21%  Similarity=0.327  Sum_probs=173.7

Q ss_pred             hcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeee-ccCCeEEEEE
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSC-SNHGFKALIL  819 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lV~  819 (1624)
                      ..++|...+.||+|+||+||+|+. .+|+.||||++.....  .+.+.+|+.++++++|++++..++++ .+.+..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            457899999999999999999986 5789999999875432  35688999999999998877776665 5667889999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee---CCCCceEEEeeeeeeccCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDG  896 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl---d~~~~~kl~DFGla~~~~~  896 (1624)
                      ||+ +|+|.+++......+++.++..++.|++.||+|||+.   +|+||||||+||++   ++++.+||+|||+++....
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  160 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  160 (296)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence            999 8999999986666799999999999999999999984   59999999999999   4888999999999987755


Q ss_pred             CCCc------ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          897 EDSV------TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       897 ~~~~------~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ....      ......||+.|+|||...+..++.++|||||||++|||+||+.||...
T Consensus       161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 3uzp_A          161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence            4321      123457999999999999889999999999999999999999999764


No 481
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.97  E-value=2e-31  Score=337.73  Aligned_cols=198  Identities=25%  Similarity=0.377  Sum_probs=172.1

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||++....  ....+.+.+|++++++++|||||++++++.+....|+||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            456888999999999999999864 78999999986432  234567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeC---CCCceEEEeeeeeeccCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISKLLDG  896 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld---~~~~~kl~DFGla~~~~~  896 (1624)
                      ||+++|+|.+++.... .+++.++..|+.|++.||+|||+.   +|+||||||+|||++   .++.+||+|||+|+....
T Consensus       101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  176 (486)
T 3mwu_A          101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ  176 (486)
T ss_dssp             CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred             EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence            9999999999987654 689999999999999999999984   599999999999995   456799999999987654


Q ss_pred             CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          897 EDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       897 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ...  ....+||+.|+|||++.+ .++.++||||+||++|||+||+.||..
T Consensus       177 ~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~  224 (486)
T 3mwu_A          177 NTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG  224 (486)
T ss_dssp             C------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            322  233479999999999865 589999999999999999999999864


No 482
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.97  E-value=1e-31  Score=322.16  Aligned_cols=200  Identities=30%  Similarity=0.493  Sum_probs=174.5

Q ss_pred             CCCCCcceeecCCccceEEEEe-----cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeeccCC--eEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-----PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHG--FKA  816 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~  816 (1624)
                      ++|...+.||+|+||.||+|+.     .+|+.||||++........+.|.+|++++++++||||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4577789999999999999984     368999999998766666678999999999999999999999987654  679


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCC
Q 047591          817 LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG  896 (1624)
Q Consensus       817 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~  896 (1624)
                      +||||+++|+|.+++......+++.++..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++....
T Consensus       121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~  197 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ  197 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred             EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence            99999999999999988766799999999999999999999984   599999999999999999999999999988754


Q ss_pred             CCCcc--cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCC
Q 047591          897 EDSVT--QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTD  946 (1624)
Q Consensus       897 ~~~~~--~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~  946 (1624)
                      .....  .....+|..|+|||.+....++.++|||||||++|||+||+.|+.
T Consensus       198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~  249 (326)
T 2w1i_A          198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK  249 (326)
T ss_dssp             SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred             cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCC
Confidence            43221  223457888999999888888999999999999999999999875


No 483
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.97  E-value=3.3e-31  Score=337.16  Aligned_cols=199  Identities=23%  Similarity=0.369  Sum_probs=171.8

Q ss_pred             hcCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc-------------hhHHHHHHHHHHHHhcCCCceeeeee
Q 047591          742 LTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD-------------GAIKSFDAECEVLRRVRHRNLVKIIS  807 (1624)
Q Consensus       742 ~t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~~  807 (1624)
                      ..++|...+.||+|+||+||+|+.. +++.||||++.....             ...+.+.+|+.++++++|||||++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            4578999999999999999999864 689999999864321             23467899999999999999999999


Q ss_pred             eeccCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCC---ceE
Q 047591          808 SCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT---VAH  884 (1624)
Q Consensus       808 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~---~~k  884 (1624)
                      +|.+....|+|||||++|+|.+++.... .+++.++..|+.|++.||+|||+.   +|+||||||+|||++.++   .+|
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k  189 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIK  189 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEE
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEE
Confidence            9999999999999999999999997654 689999999999999999999994   599999999999999776   699


Q ss_pred             EEeeeeeeccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          885 LSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       885 l~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      |+|||+|+.......  .....||+.|+|||++. +.++.++||||+||++|||++|+.||..
T Consensus       190 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~  249 (504)
T 3q5i_A          190 IVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGG  249 (504)
T ss_dssp             ECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EEECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence            999999988754322  23356999999999876 4689999999999999999999999865


No 484
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.97  E-value=2e-31  Score=320.46  Aligned_cols=200  Identities=27%  Similarity=0.384  Sum_probs=168.3

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      ++|...+.||+|+||.||+|+.. +|+.||||++.....  ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            56888899999999999999875 589999999865432  234568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCCc
Q 047591          821 YMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV  900 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~  900 (1624)
                      |+++++|.+++... ..+++..+..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++....... 
T Consensus       105 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-  179 (331)
T 4aaa_A          105 FVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-  179 (331)
T ss_dssp             CCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             cCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-
Confidence            99999998877543 3689999999999999999999994   599999999999999999999999999987654322 


Q ss_pred             ccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          901 TQTMTLATFGYMAPEYGSEG-IVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       901 ~~~~~~gt~~Y~aPE~~~~~-~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      ......||+.|+|||++... .++.++|||||||++|||+||+.||...
T Consensus       180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  228 (331)
T 4aaa_A          180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD  228 (331)
T ss_dssp             ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            22334699999999988765 6899999999999999999999998653


No 485
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.97  E-value=1.1e-31  Score=321.77  Aligned_cols=212  Identities=29%  Similarity=0.401  Sum_probs=172.8

Q ss_pred             cccCHHHHHhhcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhc-CCCceeeeeeee
Q 047591          732 RRISYQELQRLTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV-RHRNLVKIISSC  809 (1624)
Q Consensus       732 ~~~~~~el~~~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~  809 (1624)
                      ..+++.++....++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+.+++++ +||||+++++++
T Consensus        12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            4456666777889999999999999999999986 4789999999975433 346789999999999 899999999998


Q ss_pred             cc------CCeEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCc
Q 047591          810 SN------HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV  882 (1624)
Q Consensus       810 ~~------~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~  882 (1624)
                      ..      .+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.   +|+||||||+||+++.++.
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~  167 (326)
T 2x7f_A           91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAE  167 (326)
T ss_dssp             EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCC
T ss_pred             eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCC
Confidence            76      467899999999999999998653 4688999999999999999999995   5999999999999999999


Q ss_pred             eEEEeeeeeeccCCCCCcccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 047591          883 AHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS-----EGIVSTCGDVYSFGILMIETFTRKMPTDEM  948 (1624)
Q Consensus       883 ~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DvwS~Gvil~elltg~~P~~~~  948 (1624)
                      +||+|||+++....... ......||+.|+|||++.     ...++.++|||||||++|||+||+.||...
T Consensus       168 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  237 (326)
T 2x7f_A          168 VKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM  237 (326)
T ss_dssp             EEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             EEEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999987643221 123346999999999876     567899999999999999999999998653


No 486
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.97  E-value=2.5e-31  Score=326.30  Aligned_cols=198  Identities=23%  Similarity=0.335  Sum_probs=164.9

Q ss_pred             HhhcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeecc-------
Q 047591          740 QRLTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN-------  811 (1624)
Q Consensus       740 ~~~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-------  811 (1624)
                      +...++|...+.||+|+||+||+|+. .+|+.||||++.....    ...+|++++++++|||||++++++..       
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            44567899999999999999999985 5799999999864422    23479999999999999999999843       


Q ss_pred             -------------------------------CCeEEEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH
Q 047591          812 -------------------------------HGFKALILEYMPQGSLEKWLYS---HKYTLNIQQRLDIMIDVASALEYL  857 (1624)
Q Consensus       812 -------------------------------~~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yL  857 (1624)
                                                     ....++||||++ |+|.+.+..   ....+++..+..|+.|+++||+||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                           344889999998 588887763   345789999999999999999999


Q ss_pred             hcCCCCCeEeCcCCCCCeeeC-CCCceEEEeeeeeeccCCCCCcccccccccccccCccccCCC-CCCcchhHHHHHHHH
Q 047591          858 HHGHPTPVIHCDLKPSNVLLD-DDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEG-IVSTCGDVYSFGILM  935 (1624)
Q Consensus       858 H~~~~~~IiHrDlKp~NILld-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DvwS~Gvil  935 (1624)
                      |+.   +|+||||||+|||++ +++.+||+|||+|+.......  .....||+.|+|||.+.+. .++.++||||+||++
T Consensus       158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  232 (383)
T 3eb0_A          158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF  232 (383)
T ss_dssp             HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence            984   599999999999998 688999999999997654332  2334689999999987654 589999999999999


Q ss_pred             HHHHcCCCCCCc
Q 047591          936 IETFTRKMPTDE  947 (1624)
Q Consensus       936 ~elltg~~P~~~  947 (1624)
                      |||++|+.||..
T Consensus       233 ~ell~g~~pf~~  244 (383)
T 3eb0_A          233 GELILGKPLFSG  244 (383)
T ss_dssp             HHHHHSSCSSCC
T ss_pred             HHHHhCCCCCCC
Confidence            999999999865


No 487
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.97  E-value=1.4e-31  Score=315.07  Aligned_cols=200  Identities=29%  Similarity=0.349  Sum_probs=158.0

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALIL  819 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~  819 (1624)
                      .++|+..+.||+|+||+||+|+. .+|+.||||++.....  ...+.+.+|...++.++||||+++++++.+++..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            46788899999999999999986 5789999999975432  22234455556688899999999999999999999999


Q ss_pred             EecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCC
Q 047591          820 EYMPQGSLEKWLYS---HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG  896 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~  896 (1624)
                      ||++ |+|.+++..   ....+++..+..|+.|++.||+|||+.  .+|+||||||+||+++.++.+||+|||+++....
T Consensus        86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  162 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD  162 (290)
T ss_dssp             ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred             ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence            9998 589888754   345799999999999999999999984  1599999999999999999999999999987654


Q ss_pred             CCCcccccccccccccCcccc----CCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          897 EDSVTQTMTLATFGYMAPEYG----SEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       897 ~~~~~~~~~~gt~~Y~aPE~~----~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ...  .....||+.|+|||++    ....++.++|||||||++|||+||+.||..
T Consensus       163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  215 (290)
T 3fme_A          163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS  215 (290)
T ss_dssp             ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence            322  2234699999999985    566789999999999999999999999975


No 488
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.97  E-value=1.4e-31  Score=322.93  Aligned_cols=202  Identities=30%  Similarity=0.377  Sum_probs=170.8

Q ss_pred             hhcCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeeccc-chhHHHHHHHHHH-HHhcCCCceeeeeeeeccCCeEEE
Q 047591          741 RLTDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQL-DGAIKSFDAECEV-LRRVRHRNLVKIISSCSNHGFKAL  817 (1624)
Q Consensus       741 ~~t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~l  817 (1624)
                      ...++|...+.||+|+||+||+|+. .+|+.||||++.... .....++..|..+ ++.++||||+++++++.+.+..|+
T Consensus        48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l  127 (340)
T 3an0_A           48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI  127 (340)
T ss_dssp             CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred             EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence            3457788889999999999999986 578999999997543 2334556666665 788899999999999999999999


Q ss_pred             EEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeecc
Q 047591          818 ILEYMPQGSLEKWLYS---HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL  894 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~  894 (1624)
                      ||||+++ +|.+++..   ....+++..+..|+.|++.||+|||+.  .+|+||||||+|||++.++.+||+|||+++..
T Consensus       128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  204 (340)
T 3an0_A          128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYL  204 (340)
T ss_dssp             EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred             EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence            9999985 99998864   345799999999999999999999974  25999999999999999999999999999876


Q ss_pred             CCCCCcccccccccccccCccccC----CCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          895 DGEDSVTQTMTLATFGYMAPEYGS----EGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       895 ~~~~~~~~~~~~gt~~Y~aPE~~~----~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ...  .......||+.|+|||++.    ...++.++|||||||++|||+||+.||..
T Consensus       205 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~  259 (340)
T 3an0_A          205 VDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS  259 (340)
T ss_dssp             SCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             ccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence            432  1223347999999999854    44789999999999999999999999975


No 489
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.97  E-value=1.8e-31  Score=313.03  Aligned_cols=195  Identities=27%  Similarity=0.446  Sum_probs=170.7

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccchhHHHHHHHHHHHHhcCCCceeeeeeeecc----------
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN----------  811 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----------  811 (1624)
                      .++|...+.||+|+||.||+|... +|+.||||++....    +.+.+|++++++++||||+++++++..          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            456888999999999999999875 79999999997543    356789999999999999999998854          


Q ss_pred             ------CCeEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceE
Q 047591          812 ------HGFKALILEYMPQGSLEKWLYSH-KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAH  884 (1624)
Q Consensus       812 ------~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~k  884 (1624)
                            ....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.   +|+||||||+||++++++.+|
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k  162 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVK  162 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEE
Confidence                  44579999999999999999764 34689999999999999999999984   599999999999999999999


Q ss_pred             EEeeeeeeccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCC
Q 047591          885 LSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTD  946 (1624)
Q Consensus       885 l~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~  946 (1624)
                      |+|||+++.......  .....||+.|+|||++....++.++|||||||++|||+||+.|+.
T Consensus       163 l~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  222 (284)
T 2a19_B          163 IGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF  222 (284)
T ss_dssp             ECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred             ECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence            999999987754332  223469999999999988889999999999999999999998863


No 490
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.97  E-value=1.3e-31  Score=339.41  Aligned_cols=198  Identities=26%  Similarity=0.417  Sum_probs=174.3

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      .++|...+.||+|+||+||+|+.. +|+.||||++....   ....+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            456888899999999999999865 78999999986542   23457799999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeee---CCCCceEEEeeeeeeccC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLD  895 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILl---d~~~~~kl~DFGla~~~~  895 (1624)
                      |||+++|+|.+++.... .+++.++..|+.|++.||+|||+.   +|+||||||+|||+   +.++.+||+|||+|+...
T Consensus       105 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  180 (484)
T 3nyv_A          105 GEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE  180 (484)
T ss_dssp             ECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred             EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence            99999999999997654 689999999999999999999995   59999999999999   567899999999998775


Q ss_pred             CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          896 GEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       896 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ....  .....||+.|+|||++.+ .++.++||||+||++|||+||+.||..
T Consensus       181 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~  229 (484)
T 3nyv_A          181 ASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG  229 (484)
T ss_dssp             CCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCC
Confidence            4432  233469999999998765 689999999999999999999999865


No 491
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.97  E-value=3.1e-31  Score=309.83  Aligned_cols=199  Identities=26%  Similarity=0.444  Sum_probs=167.4

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEE
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALI  818 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV  818 (1624)
                      .++|...+.||+|+||.||+|... +|+.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            467888999999999999999875 79999999997542   22356789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++++|.+++.... .+++.++..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++......
T Consensus        90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~  165 (276)
T 2h6d_A           90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE  165 (276)
T ss_dssp             EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred             EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence            99999999999997654 689999999999999999999985   59999999999999999999999999998765432


Q ss_pred             CcccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .  .....||+.|+|||.+....+ +.++||||||+++|||+||+.||..
T Consensus       166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  213 (276)
T 2h6d_A          166 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD  213 (276)
T ss_dssp             -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             c--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence            2  223468999999999877655 6899999999999999999999865


No 492
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.97  E-value=3.1e-31  Score=313.61  Aligned_cols=201  Identities=26%  Similarity=0.455  Sum_probs=168.0

Q ss_pred             CCCCCcceeecCCccceEEEEecC----CCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeeeeeec-cCCeEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLPY----GMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCS-NHGFKAL  817 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~~----g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~l  817 (1624)
                      ..|...+.||+|+||+||+|+...    +..||||.+..... ...+.+.+|+.++++++||||++++++|. .++..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            356777899999999999998642    23689999875433 34578999999999999999999999864 5567899


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCC
Q 047591          818 ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE  897 (1624)
Q Consensus       818 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~  897 (1624)
                      ||||+++|+|.++++.....+++.++..|+.|+++||+|||+.   +|+||||||+||++++++.+||+|||+++.....
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  181 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  181 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred             EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccccc
Confidence            9999999999999987666789999999999999999999984   5999999999999999999999999999876543


Q ss_pred             CC---cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcC-CCCCCc
Q 047591          898 DS---VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTR-KMPTDE  947 (1624)
Q Consensus       898 ~~---~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg-~~P~~~  947 (1624)
                      ..   .......||+.|+|||.+....++.++||||||+++|||+|| ..||..
T Consensus       182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~  235 (298)
T 3f66_A          182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD  235 (298)
T ss_dssp             GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc
Confidence            21   112334678899999999888899999999999999999995 555543


No 493
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97  E-value=2.4e-30  Score=310.91  Aligned_cols=222  Identities=23%  Similarity=0.324  Sum_probs=134.1

Q ss_pred             CCcEEEccCCCCCCccchhhhccCCCcCEEEccCCcccccCCccccCCCcccccccccccccccccCcccccccccceec
Q 047591          138 RLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYL  217 (1624)
Q Consensus       138 ~L~~L~Ls~N~l~g~~~~~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~L  217 (1624)
                      +|+.++++++.++ .+|..+   .++|++|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus        32 ~l~~l~~~~~~l~-~lp~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L  107 (330)
T 1xku_A           32 HLRVVQCSDLGLE-KVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL  107 (330)
T ss_dssp             ETTEEECTTSCCC-SCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred             CCeEEEecCCCcc-ccCccC---CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence            5666777766665 344433   245556666666666544445555666666666666655555555555555555555


Q ss_pred             cCCcCCCCCCCcccccCccchheeccccccCCCCccccccCCCCcEeecccccccCcCCccccccCcCCeeeccCCcccc
Q 047591          218 NGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTD  297 (1624)
Q Consensus       218 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~~  297 (1624)
                      ++|+++ .+|..+.                           ++|++|++++|++++..+..++++++|+.|+|++|++..
T Consensus       108 s~n~l~-~l~~~~~---------------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~  159 (330)
T 1xku_A          108 SKNQLK-ELPEKMP---------------------------KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS  159 (330)
T ss_dssp             CSSCCS-BCCSSCC---------------------------TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG
T ss_pred             CCCcCC-ccChhhc---------------------------ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc
Confidence            555555 3443332                           355555555555555555555666666666666655432


Q ss_pred             cCccccccccccccccCCCccEEEeecccCCCCCCCcccccCCCccEEEecCCccCCcCcccccCCCCCcEEecCCcccc
Q 047591          298 FGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFS  377 (1624)
Q Consensus       298 l~~n~l~g~ip~~~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~  377 (1624)
                            .|..|..+.++++|++|++++|+++ .+|..+.   ++|++|+|++|++++..|..|..+++|++|+|++|.++
T Consensus       160 ------~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~  229 (330)
T 1xku_A          160 ------SGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS  229 (330)
T ss_dssp             ------GGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC
T ss_pred             ------cCcChhhccCCCCcCEEECCCCccc-cCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCc
Confidence                  1233445555566666666666665 3555442   56777777777777777777777777777777777777


Q ss_pred             ccCcccccccccccEEEccccccc
Q 047591          378 GLVANTFGNCRQLQILNLAYSQLA  401 (1624)
Q Consensus       378 g~~~~~f~~l~~L~~L~L~~N~l~  401 (1624)
                      +.++..|.++++|++|+|++|+++
T Consensus       230 ~~~~~~~~~l~~L~~L~L~~N~l~  253 (330)
T 1xku_A          230 AVDNGSLANTPHLRELHLNNNKLV  253 (330)
T ss_dssp             EECTTTGGGSTTCCEEECCSSCCS
T ss_pred             eeChhhccCCCCCCEEECCCCcCc
Confidence            777666777776666666666553


No 494
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.97  E-value=2.9e-31  Score=319.32  Aligned_cols=203  Identities=22%  Similarity=0.326  Sum_probs=158.7

Q ss_pred             cCCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcC-CCceeeeeeee--------ccC
Q 047591          743 TDGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVR-HRNLVKIISSC--------SNH  812 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~--------~~~  812 (1624)
                      ..+|+..+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.+++++. ||||+++++++        ...
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            35688889999999999999986 478999999987665556678899999999996 99999999998        344


Q ss_pred             CeEEEEEEecCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeee
Q 047591          813 GFKALILEYMPQGSLEKWLYS--HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGI  890 (1624)
Q Consensus       813 ~~~~lV~Ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGl  890 (1624)
                      ...++||||++ |+|.+++..  ....+++.++..|+.|++.||+|||+.+ ++|+||||||+|||++.++.+||+|||+
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  184 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGS  184 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCcc
Confidence            56899999996 799999865  3346899999999999999999999853 3499999999999999999999999999


Q ss_pred             eeccCCCCCcc-----------cccccccccccCcccc---CCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          891 SKLLDGEDSVT-----------QTMTLATFGYMAPEYG---SEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       891 a~~~~~~~~~~-----------~~~~~gt~~Y~aPE~~---~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ++.........           .....||+.|+|||++   ....++.++|||||||++|||+||+.||..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  255 (337)
T 3ll6_A          185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED  255 (337)
T ss_dssp             CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            98765432211           1134589999999987   566789999999999999999999999864


No 495
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.97  E-value=2.2e-31  Score=318.10  Aligned_cols=196  Identities=28%  Similarity=0.446  Sum_probs=169.9

Q ss_pred             CCcceeecCCccceEEEEec-----CCCEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCceeeeeeeecc--CCeEEEE
Q 047591          747 SESNLIGAGSFGSVYKATLP-----YGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCSN--HGFKALI  818 (1624)
Q Consensus       747 ~~~~~iG~G~~G~Vy~~~~~-----~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV  818 (1624)
                      ...+.||+|+||+||+|.+.     +|+.||||++..... ...+.|.+|++++++++||||+++++++.+  ....++|
T Consensus        34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  113 (318)
T 3lxp_A           34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV  113 (318)
T ss_dssp             EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred             hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence            77789999999999998642     688999999976543 345679999999999999999999999986  4678999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCC
Q 047591          819 LEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED  898 (1624)
Q Consensus       819 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~  898 (1624)
                      |||+++|+|.+++...  .+++.++..++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++......
T Consensus       114 ~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  188 (318)
T 3lxp_A          114 MEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH  188 (318)
T ss_dssp             ECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred             EecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence            9999999999999754  489999999999999999999994   59999999999999999999999999999876543


Q ss_pred             Cc--ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SV--TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~--~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      ..  ......||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~  239 (318)
T 3lxp_A          189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS  239 (318)
T ss_dssp             SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence            22  12334688899999999888899999999999999999999999854


No 496
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.97  E-value=3.3e-31  Score=313.50  Aligned_cols=199  Identities=27%  Similarity=0.434  Sum_probs=170.7

Q ss_pred             CCCCCcceeecCCccceEEEEec-CCCEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeccCCeEEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILE  820 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E  820 (1624)
                      ++|...+.||+|+||+||+|+.. +|+.||||++.....  ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            57888899999999999999875 689999999865432  234678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeeccCCCCC
Q 047591          821 YMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS  899 (1624)
Q Consensus       821 y~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~  899 (1624)
                      |++ |+|.+++.... ..+++..+..++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++.......
T Consensus        83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~  158 (299)
T 2r3i_A           83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR  158 (299)
T ss_dssp             CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred             ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence            998 69999997654 4688999999999999999999994   599999999999999999999999999987654322


Q ss_pred             cccccccccccccCccccCCCC-CCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          900 VTQTMTLATFGYMAPEYGSEGI-VSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       900 ~~~~~~~gt~~Y~aPE~~~~~~-~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                       ......||+.|+|||.+.+.. ++.++|||||||++|||+||+.||..
T Consensus       159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  206 (299)
T 2r3i_A          159 -TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPG  206 (299)
T ss_dssp             -CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             -ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence             223346899999999887654 79999999999999999999999865


No 497
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.97  E-value=3.9e-31  Score=323.03  Aligned_cols=196  Identities=23%  Similarity=0.285  Sum_probs=161.8

Q ss_pred             cCCCCCcceeecCCccceEEEEec-CCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCC------
Q 047591          743 TDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHG------  813 (1624)
Q Consensus       743 t~~f~~~~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------  813 (1624)
                      .++|...+.||+|+||+||+|... +|+.||||++....  ....+.+.+|+.++++++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            467889999999999999999864 68999999997542  234567889999999999999999999987654      


Q ss_pred             eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceEEEeeeeeec
Q 047591          814 FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKL  893 (1624)
Q Consensus       814 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~kl~DFGla~~  893 (1624)
                      ..|+||||++ |+|.+++..   .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+.
T Consensus       104 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  176 (371)
T 2xrw_A          104 DVYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART  176 (371)
T ss_dssp             EEEEEEECCS-EEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred             ceEEEEEcCC-CCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence            7899999998 579888853   588999999999999999999984   599999999999999999999999999987


Q ss_pred             cCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          894 LDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       894 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .....  ......||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       177 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  228 (371)
T 2xrw_A          177 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG  228 (371)
T ss_dssp             ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            64322  22335799999999999888899999999999999999999999865


No 498
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.97  E-value=5e-31  Score=316.67  Aligned_cols=192  Identities=21%  Similarity=0.362  Sum_probs=168.3

Q ss_pred             CCCCCcceeecCCccceEEEEe-cCCCEEEEEEeecccchhHHHHHHHHHHHHhcC-CCceeeeeeeecc--CCeEEEEE
Q 047591          744 DGFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVR-HRNLVKIISSCSN--HGFKALIL  819 (1624)
Q Consensus       744 ~~f~~~~~iG~G~~G~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--~~~~~lV~  819 (1624)
                      ++|+..+.||+|+||+||+|+. .+++.||||++...   ..+.+.+|++++++++ ||||+++++++.+  ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            5688889999999999999985 57899999998743   3467899999999997 9999999999987  66789999


Q ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCC-ceEEEeeeeeeccCCCC
Q 047591          820 EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISKLLDGED  898 (1624)
Q Consensus       820 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~-~~kl~DFGla~~~~~~~  898 (1624)
                      ||+++++|.+++.    .+++.++..++.|++.||+|||+.   +|+||||||+|||++.++ .+||+|||+|+......
T Consensus       113 e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~  185 (330)
T 3nsz_A          113 EHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ  185 (330)
T ss_dssp             ECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred             eccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence            9999999999874    478899999999999999999984   599999999999999776 89999999998765433


Q ss_pred             CcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          899 SVTQTMTLATFGYMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       899 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      .  .....||+.|+|||++.. ..++.++|||||||++|||+||+.||..
T Consensus       186 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~  233 (330)
T 3nsz_A          186 E--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH  233 (330)
T ss_dssp             C--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             c--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            2  233468999999998766 6789999999999999999999999854


No 499
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.97  E-value=2e-31  Score=319.73  Aligned_cols=209  Identities=21%  Similarity=0.330  Sum_probs=175.6

Q ss_pred             cCHHHHHhhcCCCCCc-ceeecCCccceEEEEec-CCCEEEEEEeeccc--chhHHHHHHHHHHHHhcC-CCceeeeeee
Q 047591          734 ISYQELQRLTDGFSES-NLIGAGSFGSVYKATLP-YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVR-HRNLVKIISS  808 (1624)
Q Consensus       734 ~~~~el~~~t~~f~~~-~~iG~G~~G~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~  808 (1624)
                      +.++..+...+.|... +.||+|+||+||+|... +|+.||||++....  ....+.+.+|+.++++++ ||||++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~   97 (327)
T 3lm5_A           18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV   97 (327)
T ss_dssp             CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence            3444455556667766 88999999999999865 68999999987543  233567899999999995 6999999999


Q ss_pred             eccCCeEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCC---CCceE
Q 047591          809 CSNHGFKALILEYMPQGSLEKWLYSH-KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAH  884 (1624)
Q Consensus       809 ~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~---~~~~k  884 (1624)
                      +.+.+..++||||+++|+|.+++... ...+++.++..|+.|++.||+|||+.   +|+||||||+||+++.   ++.+|
T Consensus        98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k  174 (327)
T 3lm5_A           98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK  174 (327)
T ss_dssp             EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred             EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence            99999999999999999999998643 34689999999999999999999984   5999999999999998   78999


Q ss_pred             EEeeeeeeccCCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 047591          885 LSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE  947 (1624)
Q Consensus       885 l~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~elltg~~P~~~  947 (1624)
                      |+|||+++.......  .....||+.|+|||++....++.++|||||||++|||+||+.||..
T Consensus       175 L~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  235 (327)
T 3lm5_A          175 IVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG  235 (327)
T ss_dssp             ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999987654322  2234699999999999988999999999999999999999999865


No 500
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.97  E-value=2e-31  Score=317.69  Aligned_cols=205  Identities=26%  Similarity=0.453  Sum_probs=162.9

Q ss_pred             hhcCCCCCcceeecCCccceEEEEec----CCCEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCceeeeeeeeccCC-
Q 047591          741 RLTDGFSESNLIGAGSFGSVYKATLP----YGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSCSNHG-  813 (1624)
Q Consensus       741 ~~t~~f~~~~~iG~G~~G~Vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  813 (1624)
                      ...++|...+.||+|+||.||+|+..    +++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+ 
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~  110 (313)
T 3brb_A           31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS  110 (313)
T ss_dssp             CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred             cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence            34567888899999999999999754    34589999987543  234567999999999999999999999997655 


Q ss_pred             ----eEEEEEEecCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeCcCCCCCeeeCCCCceE
Q 047591          814 ----FKALILEYMPQGSLEKWLYSH-----KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAH  884 (1624)
Q Consensus       814 ----~~~lV~Ey~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~IiHrDlKp~NILld~~~~~k  884 (1624)
                          ..++||||+++|+|.+++...     ...+++.+++.|+.|+++||+|||+.   +|+||||||+||+++.++.+|
T Consensus       111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k  187 (313)
T 3brb_A          111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC  187 (313)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred             cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence                359999999999999999532     24689999999999999999999984   599999999999999999999


Q ss_pred             EEeeeeeeccCCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCCcc
Q 047591          885 LSDFGISKLLDGEDSV-TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT-RKMPTDEM  948 (1624)
Q Consensus       885 l~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DvwS~Gvil~ellt-g~~P~~~~  948 (1624)
                      |+|||+++........ ......+|+.|+|||......++.++|||||||++|||+| |+.||...
T Consensus       188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  253 (313)
T 3brb_A          188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV  253 (313)
T ss_dssp             ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC
Confidence            9999999876543221 2233457889999999988889999999999999999999 88888653


Done!