Query 047598
Match_columns 1112
No_of_seqs 674 out of 4546
Neff 10.1
Searched_HMMs 13730
Date Mon Mar 25 22:39:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047598.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047598hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a5yb3 c.37.1.20 (B:109-385) 100.0 9.9E-39 7.2E-43 339.6 19.4 252 173-443 15-277 (277)
2 d2omza2 c.10.2.1 (A:33-416) In 99.8 4.5E-20 3.2E-24 208.5 21.6 342 590-1070 42-383 (384)
3 d2omza2 c.10.2.1 (A:33-416) In 99.7 1.2E-17 8.8E-22 188.2 21.1 102 558-673 42-143 (384)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.7 3.6E-17 2.6E-21 177.3 23.5 98 593-695 11-109 (305)
5 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 1.1E-18 7.9E-23 190.2 8.8 106 592-697 50-160 (313)
6 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 1.1E-15 8E-20 169.7 29.6 98 592-701 38-135 (353)
7 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 6.9E-18 5E-22 183.7 8.6 228 585-836 69-302 (313)
8 d1xkua_ c.10.2.7 (A:) Decorin 99.6 4.5E-15 3.3E-19 160.4 21.5 258 781-1072 14-284 (305)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.6 7.9E-15 5.8E-19 154.5 17.8 193 592-864 10-204 (266)
10 d1jl5a_ c.10.2.6 (A:) Leucine 99.5 4.3E-13 3.1E-17 148.3 24.8 87 591-686 57-143 (353)
11 d1p9ag_ c.10.2.7 (G:) von Will 99.5 4E-14 2.9E-18 149.0 13.5 173 592-836 31-206 (266)
12 d1ozna_ c.10.2.7 (A:) Reticulo 99.5 2.5E-13 1.9E-17 144.5 17.9 217 598-902 17-238 (284)
13 d1ozna_ c.10.2.7 (A:) Reticulo 99.4 1.6E-12 1.2E-16 138.3 18.4 217 785-1051 19-239 (284)
14 d1h6ua2 c.10.2.1 (A:36-262) In 99.4 3E-13 2.2E-17 138.5 11.3 81 589-673 38-118 (227)
15 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 3.2E-12 2.3E-16 132.4 17.1 101 595-697 11-114 (242)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.4 1.4E-13 1E-17 141.1 6.3 98 592-695 19-116 (227)
17 d1h6ta2 c.10.2.1 (A:31-240) In 99.4 6.5E-13 4.7E-17 133.7 10.5 98 590-693 44-141 (210)
18 d2omxa2 c.10.2.1 (A:37-235) In 99.3 2E-12 1.5E-16 128.8 12.0 80 590-673 38-117 (199)
19 d1dcea3 c.10.2.2 (A:444-567) R 99.3 2.1E-12 1.5E-16 116.7 7.6 101 595-699 1-103 (124)
20 d1h6ta2 c.10.2.1 (A:31-240) In 99.3 5.4E-12 3.9E-16 126.8 10.7 94 598-697 30-123 (210)
21 d2omxa2 c.10.2.1 (A:37-235) In 99.3 1E-11 7.4E-16 123.7 11.7 94 597-696 23-116 (199)
22 d1a9na_ c.10.2.4 (A:) Spliceso 99.2 5.6E-12 4.1E-16 120.0 6.0 110 588-700 14-126 (162)
23 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.2 3.3E-10 2.4E-14 116.9 19.9 204 780-1009 11-219 (242)
24 d1a9na_ c.10.2.4 (A:) Spliceso 99.1 2.1E-11 1.5E-15 116.0 7.7 130 555-696 13-149 (162)
25 d1dcea3 c.10.2.2 (A:444-567) R 99.1 4.6E-11 3.4E-15 107.7 8.8 89 588-679 16-106 (124)
26 d2astb2 c.10.1.3 (B:2136-2419) 99.1 6.8E-12 4.9E-16 132.7 3.7 60 801-865 174-235 (284)
27 d2astb2 c.10.1.3 (B:2136-2419) 99.1 8.5E-12 6.2E-16 131.9 1.0 35 801-835 45-81 (284)
28 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.0 1.2E-09 8.8E-14 115.6 13.4 195 176-398 10-254 (283)
29 d1m9la_ c.10.3.1 (A:) Outer ar 98.9 1.2E-11 8.6E-16 122.3 -7.0 107 587-697 43-151 (198)
30 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.9 2.6E-09 1.9E-13 105.1 9.8 106 592-699 29-139 (192)
31 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.8 5.4E-12 4E-16 144.9 -12.4 93 580-673 15-123 (460)
32 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.8 3.3E-09 2.4E-13 104.3 9.5 88 585-673 47-137 (192)
33 d1m9la_ c.10.3.1 (A:) Outer ar 98.8 1.5E-10 1.1E-14 114.1 -3.0 128 554-693 42-181 (198)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.7 2.6E-11 1.9E-15 139.1 -10.8 107 592-699 2-125 (460)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 98.6 3.3E-08 2.4E-12 92.7 9.1 85 588-673 27-114 (156)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 98.6 3.4E-08 2.5E-12 92.6 8.9 103 594-698 10-115 (156)
37 d1fnna2 c.37.1.20 (A:1-276) CD 98.6 2.2E-06 1.6E-10 89.3 24.4 177 178-360 16-206 (276)
38 d1sxjc2 c.37.1.20 (C:12-238) R 98.5 4.7E-07 3.4E-11 91.3 14.3 179 178-386 14-194 (227)
39 d1sxjb2 c.37.1.20 (B:7-230) Re 98.5 7.5E-07 5.5E-11 89.4 15.6 182 177-387 14-197 (224)
40 d1sxjd2 c.37.1.20 (D:26-262) R 98.4 3.7E-07 2.7E-11 92.9 11.8 195 178-391 12-209 (237)
41 d1iqpa2 c.37.1.20 (A:2-232) Re 98.4 7.7E-07 5.6E-11 89.9 12.1 179 177-386 23-204 (231)
42 d1njfa_ c.37.1.20 (A:) delta p 98.4 1E-05 7.4E-10 81.6 20.1 186 178-392 12-217 (239)
43 d1sxje2 c.37.1.20 (E:4-255) Re 98.3 1.7E-06 1.3E-10 88.7 12.9 195 177-387 10-228 (252)
44 d1r6bx2 c.37.1.20 (X:169-436) 98.3 3.2E-06 2.3E-10 85.1 14.2 158 179-359 19-194 (268)
45 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.2 2.3E-08 1.7E-12 108.6 -3.9 85 588-673 27-132 (344)
46 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.2 5.3E-09 3.8E-13 113.9 -9.8 92 605-697 21-132 (344)
47 d1w5sa2 c.37.1.20 (A:7-293) CD 98.1 5.2E-05 3.8E-09 78.9 19.8 183 177-359 15-222 (287)
48 d1sxja2 c.37.1.20 (A:295-547) 98.1 1.8E-05 1.3E-09 80.9 15.3 198 177-391 13-226 (253)
49 d1jbka_ c.37.1.20 (A:) ClpB, A 98.1 7.1E-06 5.1E-10 77.5 10.3 154 179-354 23-193 (195)
50 d1a5ta2 c.37.1.20 (A:1-207) de 98.0 5.1E-05 3.7E-09 74.1 15.9 180 183-389 7-201 (207)
51 d1ixsb2 c.37.1.20 (B:4-242) Ho 97.9 0.00011 8.3E-09 73.8 17.1 176 178-390 9-205 (239)
52 d1lv7a_ c.37.1.20 (A:) AAA dom 97.8 0.00022 1.6E-08 71.5 17.2 181 178-386 12-217 (256)
53 d1in4a2 c.37.1.20 (A:17-254) H 97.8 0.00015 1.1E-08 72.8 15.9 175 178-390 9-204 (238)
54 d1l8qa2 c.37.1.20 (A:77-289) C 97.7 8.6E-05 6.3E-09 72.5 12.3 150 208-383 37-198 (213)
55 d1qvra2 c.37.1.20 (A:149-535) 97.7 8.6E-05 6.3E-09 79.1 12.4 158 179-359 23-197 (387)
56 d1ixza_ c.37.1.20 (A:) AAA dom 97.7 0.00015 1.1E-08 72.5 13.0 180 178-385 9-213 (247)
57 d1koha1 c.10.2.3 (A:201-362) m 97.6 1.6E-06 1.2E-10 81.4 -3.2 43 589-631 62-107 (162)
58 d1e32a2 c.37.1.20 (A:201-458) 97.6 0.00046 3.3E-08 69.7 15.2 179 179-385 5-206 (258)
59 d1koha1 c.10.2.3 (A:201-362) m 97.5 6.2E-06 4.5E-10 77.4 -1.0 99 597-696 47-156 (162)
60 d1r7ra3 c.37.1.20 (A:471-735) 97.3 0.00096 7E-08 67.4 13.3 180 179-386 8-213 (265)
61 d1d2na_ c.37.1.20 (A:) Hexamer 97.1 0.00083 6E-08 67.0 9.8 55 178-232 9-65 (246)
62 d2gnoa2 c.37.1.20 (A:11-208) g 96.9 0.0032 2.3E-07 60.1 11.8 122 206-346 14-138 (198)
63 d1r6bx3 c.37.1.20 (X:437-751) 96.5 0.0017 1.3E-07 67.3 7.1 120 179-314 23-146 (315)
64 d1qvra3 c.37.1.20 (A:536-850) 96.3 0.0019 1.4E-07 66.7 6.2 124 179-314 24-150 (315)
65 d1ly1a_ c.37.1.1 (A:) Polynucl 95.8 0.0019 1.4E-07 59.0 3.1 23 208-230 3-25 (152)
66 d1lw7a2 c.37.1.1 (A:220-411) T 95.7 0.0023 1.7E-07 61.0 3.3 26 206-231 6-31 (192)
67 d2bdta1 c.37.1.25 (A:1-176) Hy 95.6 0.0025 1.9E-07 59.7 3.2 24 208-231 3-26 (176)
68 d1kaga_ c.37.1.2 (A:) Shikimat 95.6 0.0019 1.4E-07 60.1 2.2 24 208-231 3-26 (169)
69 d1m8pa3 c.37.1.15 (A:391-573) 95.5 0.0036 2.6E-07 59.1 3.9 27 206-232 5-31 (183)
70 d1np6a_ c.37.1.10 (A:) Molybdo 95.5 0.0027 1.9E-07 59.3 2.8 26 207-232 2-27 (170)
71 d1yj5a2 c.37.1.1 (A:351-522) 5 95.4 0.015 1.1E-06 53.9 7.7 26 205-230 12-37 (172)
72 d1pgva_ c.10.1.1 (A:) Tropomod 95.4 0.0031 2.3E-07 58.5 2.8 61 611-672 40-110 (167)
73 d1rz3a_ c.37.1.6 (A:) Hypothet 95.4 0.0071 5.2E-07 57.9 5.5 42 186-232 6-47 (198)
74 d1mo6a1 c.37.1.11 (A:1-269) Re 95.3 0.02 1.4E-06 56.8 8.5 86 204-299 57-148 (269)
75 d2qy9a2 c.37.1.10 (A:285-495) 95.2 0.022 1.6E-06 54.0 8.3 59 205-269 7-67 (211)
76 d1rkba_ c.37.1.1 (A:) Adenylat 95.1 0.0038 2.8E-07 58.3 2.7 23 209-231 6-28 (173)
77 d1pgva_ c.10.1.1 (A:) Tropomod 95.1 0.005 3.7E-07 57.0 3.4 111 558-672 13-141 (167)
78 d1ukza_ c.37.1.1 (A:) Uridylat 95.1 0.0055 4E-07 58.7 3.8 28 204-231 5-32 (196)
79 d1qf9a_ c.37.1.1 (A:) UMP/CMP 95.0 0.0062 4.5E-07 58.2 3.8 27 205-231 4-30 (194)
80 d1knqa_ c.37.1.17 (A:) Glucona 95.0 0.0064 4.6E-07 56.6 3.8 27 205-231 4-30 (171)
81 d1viaa_ c.37.1.2 (A:) Shikimat 95.0 0.0047 3.4E-07 56.9 2.7 23 210-232 3-25 (161)
82 d1okkd2 c.37.1.10 (D:97-303) G 94.9 0.018 1.3E-06 54.6 6.7 58 206-268 5-63 (207)
83 d1zp6a1 c.37.1.25 (A:6-181) Hy 94.9 0.0071 5.2E-07 56.6 3.8 25 207-231 4-28 (176)
84 d1u94a1 c.37.1.11 (A:6-268) Re 94.9 0.016 1.2E-06 57.4 6.7 83 206-298 53-141 (263)
85 d1xp8a1 c.37.1.11 (A:15-282) R 94.9 0.024 1.7E-06 56.3 7.9 84 205-298 55-144 (268)
86 d1qhxa_ c.37.1.3 (A:) Chloramp 94.9 0.0056 4.1E-07 57.4 3.0 25 207-231 3-27 (178)
87 d2i3ba1 c.37.1.11 (A:1-189) Ca 94.8 0.0047 3.4E-07 58.5 2.2 25 208-232 2-26 (189)
88 d1xjca_ c.37.1.10 (A:) Molybdo 94.8 0.0058 4.2E-07 56.5 2.8 25 208-232 2-26 (165)
89 d2iyva1 c.37.1.2 (A:2-166) Shi 94.7 0.0063 4.6E-07 56.3 2.9 23 210-232 4-26 (165)
90 d1khta_ c.37.1.1 (A:) Adenylat 94.7 0.0064 4.7E-07 57.7 2.8 25 208-232 2-26 (190)
91 d1x6va3 c.37.1.4 (A:34-228) Ad 94.7 0.0058 4.2E-07 58.4 2.5 27 206-232 18-44 (195)
92 d1ny5a2 c.37.1.20 (A:138-384) 94.6 0.025 1.9E-06 55.7 7.3 46 179-230 1-46 (247)
93 d1e6ca_ c.37.1.2 (A:) Shikimat 94.5 0.0061 4.5E-07 56.7 2.2 24 209-232 4-27 (170)
94 d1y63a_ c.37.1.1 (A:) Probable 94.5 0.0083 6E-07 56.0 3.2 25 207-231 5-29 (174)
95 d1bifa1 c.37.1.7 (A:37-249) 6- 94.5 0.0092 6.7E-07 57.8 3.5 26 207-232 2-27 (213)
96 d1j8yf2 c.37.1.10 (F:87-297) G 94.5 0.024 1.7E-06 53.8 6.3 60 204-268 9-69 (211)
97 d2pmka1 c.37.1.12 (A:467-707) 94.4 0.12 9E-06 50.0 11.6 24 208-231 30-53 (241)
98 d1gvnb_ c.37.1.21 (B:) Plasmid 94.4 0.017 1.2E-06 58.4 5.5 44 186-232 14-57 (273)
99 d1ofha_ c.37.1.20 (A:) HslU {H 94.1 0.006 4.4E-07 63.0 1.3 54 178-231 14-73 (309)
100 d1uj2a_ c.37.1.6 (A:) Uridine- 94.1 0.049 3.6E-06 52.4 8.1 24 208-231 3-26 (213)
101 d1sq5a_ c.37.1.6 (A:) Pantothe 94.0 0.035 2.6E-06 56.1 6.9 82 204-290 77-160 (308)
102 d1vmaa2 c.37.1.10 (A:82-294) G 93.9 0.029 2.1E-06 53.3 5.5 59 205-268 9-68 (213)
103 d1nksa_ c.37.1.1 (A:) Adenylat 93.8 0.014 9.8E-07 55.5 3.2 25 208-232 2-26 (194)
104 d1io0a_ c.10.1.1 (A:) Tropomod 93.8 0.0037 2.7E-07 58.0 -1.1 82 589-670 14-110 (166)
105 d1ls1a2 c.37.1.10 (A:89-295) G 93.7 0.077 5.6E-06 50.2 8.3 57 206-268 9-67 (207)
106 d1ye8a1 c.37.1.11 (A:1-178) Hy 93.7 0.014 1E-06 54.6 2.9 23 210-232 3-25 (178)
107 d2jdid3 c.37.1.11 (D:82-357) C 93.5 0.12 8.5E-06 50.9 9.4 52 209-264 70-122 (276)
108 d1ak2a1 c.37.1.1 (A:14-146,A:1 93.4 0.021 1.5E-06 54.0 3.6 25 206-231 3-27 (190)
109 d1teva_ c.37.1.1 (A:) UMP/CMP 93.3 0.02 1.5E-06 54.3 3.4 24 208-231 2-25 (194)
110 d1q3ta_ c.37.1.1 (A:) CMP kina 93.2 0.04 2.9E-06 53.5 5.6 44 209-268 5-48 (223)
111 d1m7ga_ c.37.1.4 (A:) Adenosin 93.2 0.024 1.8E-06 54.2 3.7 27 205-231 22-48 (208)
112 d2ak3a1 c.37.1.1 (A:0-124,A:16 93.1 0.019 1.4E-06 54.2 2.8 23 209-231 8-30 (189)
113 d1ckea_ c.37.1.1 (A:) CMP kina 93.1 0.018 1.3E-06 56.2 2.7 25 208-232 4-28 (225)
114 d2qm8a1 c.37.1.10 (A:5-327) Me 92.9 0.041 3E-06 56.3 5.3 40 186-231 36-75 (323)
115 d2p67a1 c.37.1.10 (A:1-327) LA 92.9 0.044 3.2E-06 56.2 5.5 40 187-232 40-79 (327)
116 d1io0a_ c.10.1.1 (A:) Tropomod 92.9 0.019 1.4E-06 52.9 2.4 113 558-673 15-143 (166)
117 d1zina1 c.37.1.1 (A:1-125,A:16 92.8 0.022 1.6E-06 53.3 2.9 22 210-231 3-24 (182)
118 d2hyda1 c.37.1.12 (A:324-578) 92.8 0.13 9.4E-06 50.3 8.5 23 208-230 45-67 (255)
119 d1odfa_ c.37.1.6 (A:) Hypothet 92.7 0.12 9E-06 51.2 8.4 82 204-288 24-113 (286)
120 d3adka_ c.37.1.1 (A:) Adenylat 92.7 0.022 1.6E-06 54.1 2.6 25 207-231 8-32 (194)
121 d1uf9a_ c.37.1.1 (A:) Dephosph 92.7 0.025 1.8E-06 53.6 3.0 22 207-228 3-24 (191)
122 d1gkya_ c.37.1.1 (A:) Guanylat 92.6 0.024 1.8E-06 53.3 2.7 23 209-231 3-25 (186)
123 d1znwa1 c.37.1.1 (A:20-201) Gu 92.5 0.024 1.8E-06 53.1 2.7 24 208-231 3-26 (182)
124 d1s3ga1 c.37.1.1 (A:1-125,A:16 92.4 0.025 1.8E-06 53.0 2.7 22 210-231 3-24 (182)
125 d2cdna1 c.37.1.1 (A:1-181) Ade 92.4 0.028 2E-06 52.6 2.9 22 210-231 3-24 (181)
126 d1lvga_ c.37.1.1 (A:) Guanylat 92.3 0.022 1.6E-06 53.8 2.0 23 209-231 2-24 (190)
127 d1zaka1 c.37.1.1 (A:3-127,A:15 92.2 0.029 2.1E-06 53.0 2.7 23 209-231 5-27 (189)
128 d1xpua3 c.37.1.11 (A:129-417) 92.2 0.12 8.5E-06 51.2 7.3 37 189-232 32-68 (289)
129 d1w44a_ c.37.1.11 (A:) NTPase 92.1 0.1 7.3E-06 52.8 6.8 25 207-231 123-147 (321)
130 d1cp2a_ c.37.1.10 (A:) Nitroge 91.9 0.038 2.7E-06 55.6 3.3 37 208-249 2-38 (269)
131 d1akya1 c.37.1.1 (A:3-130,A:16 91.8 0.036 2.6E-06 51.8 2.9 24 207-231 3-26 (180)
132 d1ihua2 c.37.1.10 (A:308-586) 91.8 0.062 4.5E-06 54.3 5.0 37 186-230 7-43 (279)
133 d2vp4a1 c.37.1.1 (A:12-208) De 91.8 0.042 3.1E-06 52.1 3.4 27 205-231 7-33 (197)
134 d1kgda_ c.37.1.1 (A:) Guanylat 91.7 0.036 2.6E-06 51.5 2.7 24 208-231 4-27 (178)
135 d1e4va1 c.37.1.1 (A:1-121,A:15 91.5 0.039 2.8E-06 51.5 2.7 22 210-231 3-24 (179)
136 d1ihua1 c.37.1.10 (A:1-296) Ar 90.2 0.083 6.1E-06 53.8 4.1 45 206-255 7-51 (296)
137 d1svma_ c.37.1.20 (A:) Papillo 90.2 0.095 6.9E-06 54.5 4.5 29 204-232 151-179 (362)
138 d1yrba1 c.37.1.10 (A:1-244) AT 90.1 0.067 4.9E-06 52.7 3.1 22 209-230 2-23 (244)
139 d1g2912 c.37.1.12 (1:1-240) Ma 90.1 0.074 5.4E-06 51.4 3.3 24 208-231 30-53 (240)
140 d1vhta_ c.37.1.1 (A:) Dephosph 89.9 0.073 5.3E-06 50.9 3.1 21 208-228 4-24 (208)
141 d1s96a_ c.37.1.1 (A:) Guanylat 89.9 0.068 4.9E-06 50.8 2.8 24 208-231 3-26 (205)
142 d1l2ta_ c.37.1.12 (A:) MJ0796 89.9 0.075 5.5E-06 51.0 3.1 23 208-230 32-54 (230)
143 d1w36d1 c.37.1.19 (D:2-360) Ex 89.9 0.27 2E-05 50.9 7.8 133 184-332 151-301 (359)
144 d1sgwa_ c.37.1.12 (A:) Putativ 89.8 0.063 4.6E-06 50.7 2.5 24 208-231 28-51 (200)
145 d2afhe1 c.37.1.10 (E:1-289) Ni 89.8 0.075 5.5E-06 53.9 3.3 39 208-251 3-41 (289)
146 d3dhwc1 c.37.1.12 (C:1-240) Me 89.8 0.072 5.2E-06 51.4 2.9 24 208-231 32-55 (240)
147 d1b0ua_ c.37.1.12 (A:) ATP-bin 89.5 0.08 5.8E-06 52.0 3.1 23 208-230 29-51 (258)
148 d2awna2 c.37.1.12 (A:4-235) Ma 89.5 0.087 6.4E-06 50.5 3.3 24 208-231 27-50 (232)
149 d1tf7a2 c.37.1.11 (A:256-497) 89.4 0.11 8.1E-06 50.9 4.1 42 205-251 24-65 (242)
150 d1p5zb_ c.37.1.1 (B:) Deoxycyt 89.3 0.068 4.9E-06 52.5 2.4 25 207-231 2-26 (241)
151 d1fx0a3 c.37.1.11 (A:97-372) C 89.2 0.38 2.8E-05 47.3 7.9 39 209-252 69-107 (276)
152 d3b60a1 c.37.1.12 (A:329-581) 89.2 0.083 6.1E-06 51.8 2.9 23 208-230 42-64 (253)
153 d1v43a3 c.37.1.12 (A:7-245) Hy 89.2 0.095 6.9E-06 50.5 3.3 24 208-231 33-56 (239)
154 d1mv5a_ c.37.1.12 (A:) Multidr 89.2 0.1 7.3E-06 50.8 3.5 25 207-231 28-52 (242)
155 d2ocpa1 c.37.1.1 (A:37-277) De 89.1 0.094 6.9E-06 51.5 3.4 25 207-231 2-26 (241)
156 d1szpa2 c.37.1.11 (A:145-395) 89.1 0.19 1.4E-05 49.2 5.8 51 205-255 32-83 (251)
157 d1jjva_ c.37.1.1 (A:) Dephosph 89.1 0.093 6.7E-06 50.0 3.1 21 208-228 3-23 (205)
158 d1jj7a_ c.37.1.12 (A:) Peptide 88.9 0.096 7E-06 51.3 3.1 25 207-231 40-64 (251)
159 d2onka1 c.37.1.12 (A:1-240) Mo 88.8 0.1 7.6E-06 50.1 3.3 23 209-231 26-48 (240)
160 d1r8sa_ c.37.1.8 (A:) ADP-ribo 88.7 0.089 6.5E-06 47.6 2.7 22 210-231 3-24 (160)
161 d1v5wa_ c.37.1.11 (A:) Meiotic 88.4 0.47 3.4E-05 46.5 8.3 52 204-255 34-86 (258)
162 d1upta_ c.37.1.8 (A:) ADP-ribo 88.4 0.11 7.8E-06 47.5 3.0 22 210-231 8-29 (169)
163 d1pzna2 c.37.1.11 (A:96-349) D 88.3 0.44 3.2E-05 46.7 8.0 52 205-256 34-86 (254)
164 d1gsia_ c.37.1.1 (A:) Thymidyl 88.3 0.13 9.6E-06 49.0 3.7 24 209-232 2-25 (208)
165 d3d31a2 c.37.1.12 (A:1-229) Su 88.3 0.095 6.9E-06 50.1 2.5 24 208-231 27-50 (229)
166 d4tmka_ c.37.1.1 (A:) Thymidyl 88.2 0.41 3E-05 45.4 7.3 25 208-232 3-27 (210)
167 d1g8pa_ c.37.1.20 (A:) ATPase 88.2 0.083 6E-06 54.9 2.3 45 177-229 6-50 (333)
168 d1svia_ c.37.1.8 (A:) Probable 88.2 0.12 9.1E-06 48.5 3.4 27 204-230 20-46 (195)
169 d1r0wa_ c.37.1.12 (A:) Cystic 88.2 0.11 8.1E-06 51.8 3.1 26 207-232 62-87 (281)
170 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 88.1 0.17 1.2E-05 46.9 4.4 23 208-230 14-36 (186)
171 d1nn5a_ c.37.1.1 (A:) Thymidyl 88.1 0.11 8.1E-06 49.4 2.9 25 208-232 4-28 (209)
172 d1hyqa_ c.37.1.10 (A:) Cell di 88.0 0.18 1.3E-05 48.8 4.7 38 208-250 2-40 (232)
173 d1cr2a_ c.37.1.11 (A:) Gene 4 88.0 0.87 6.4E-05 45.1 10.1 54 208-267 36-89 (277)
174 d1z06a1 c.37.1.8 (A:32-196) Ra 87.8 0.12 9E-06 47.0 3.0 22 209-230 4-25 (165)
175 d2a5ja1 c.37.1.8 (A:9-181) Rab 87.6 0.13 9.4E-06 47.3 3.0 21 210-230 6-26 (173)
176 d1z0fa1 c.37.1.8 (A:8-173) Rab 87.6 0.13 9.5E-06 46.9 3.0 22 209-230 6-27 (166)
177 d1a7ja_ c.37.1.6 (A:) Phosphor 87.5 0.066 4.8E-06 53.1 0.9 25 207-231 4-28 (288)
178 d1z2aa1 c.37.1.8 (A:8-171) Rab 87.5 0.13 9.6E-06 46.8 3.0 21 210-230 5-25 (164)
179 d1ji0a_ c.37.1.12 (A:) Branche 87.1 0.14 1E-05 49.6 3.1 24 208-231 33-56 (240)
180 d2erxa1 c.37.1.8 (A:6-176) di- 87.0 0.15 1.1E-05 46.7 3.1 22 210-231 5-26 (171)
181 d1ksha_ c.37.1.8 (A:) ADP-ribo 87.0 0.15 1.1E-05 46.3 3.1 21 210-230 5-25 (165)
182 d1g6ha_ c.37.1.12 (A:) MJ1267 86.7 0.16 1.1E-05 49.9 3.1 24 208-231 31-54 (254)
183 d3raba_ c.37.1.8 (A:) Rab3a {R 86.7 0.16 1.1E-05 46.5 3.0 22 209-230 7-28 (169)
184 d1z08a1 c.37.1.8 (A:17-183) Ra 86.6 0.16 1.2E-05 46.3 3.0 22 209-230 5-26 (167)
185 d1vpla_ c.37.1.12 (A:) Putativ 86.6 0.16 1.2E-05 49.1 3.1 24 208-231 29-52 (238)
186 d1nija1 c.37.1.10 (A:2-223) Hy 86.5 0.16 1.2E-05 48.7 3.1 25 206-230 2-26 (222)
187 d2gjsa1 c.37.1.8 (A:91-258) Ra 86.5 0.17 1.2E-05 46.2 3.1 21 210-230 4-24 (168)
188 d1oxxk2 c.37.1.12 (K:1-242) Gl 86.5 0.11 8.1E-06 50.0 1.8 23 208-230 32-54 (242)
189 d1z0ja1 c.37.1.8 (A:2-168) Rab 86.4 0.16 1.2E-05 46.2 3.0 22 210-231 7-28 (167)
190 d1wf3a1 c.37.1.8 (A:3-180) GTP 86.4 0.21 1.6E-05 46.0 3.9 25 207-231 5-29 (178)
191 d1yzqa1 c.37.1.8 (A:14-177) Ra 86.4 0.16 1.1E-05 46.2 2.8 22 210-231 3-24 (164)
192 d2ew1a1 c.37.1.8 (A:4-174) Rab 86.4 0.16 1.1E-05 46.6 2.8 22 209-230 7-28 (171)
193 d1kaoa_ c.37.1.8 (A:) Rap2a {H 86.4 0.17 1.2E-05 46.2 3.0 23 209-231 5-27 (167)
194 d1mkya1 c.37.1.8 (A:2-172) Pro 86.3 0.18 1.3E-05 46.1 3.3 22 209-230 2-23 (171)
195 d2f7sa1 c.37.1.8 (A:5-190) Rab 86.3 0.17 1.3E-05 47.0 3.2 21 210-230 8-28 (186)
196 d1egaa1 c.37.1.8 (A:4-182) GTP 86.1 0.22 1.6E-05 45.9 3.7 25 206-230 4-28 (179)
197 d1tmka_ c.37.1.1 (A:) Thymidyl 86.1 0.16 1.2E-05 48.4 2.9 26 207-232 3-28 (214)
198 d1g16a_ c.37.1.8 (A:) Rab-rela 86.0 0.17 1.2E-05 46.1 2.8 21 210-230 5-25 (166)
199 d1fzqa_ c.37.1.8 (A:) ADP-ribo 86.0 0.24 1.8E-05 45.4 4.0 22 209-230 18-39 (176)
200 d1r2qa_ c.37.1.8 (A:) Rab5a {H 85.9 0.18 1.3E-05 46.1 3.0 23 209-231 8-30 (170)
201 d1deka_ c.37.1.1 (A:) Deoxynuc 85.9 0.18 1.3E-05 49.2 3.2 23 208-230 2-24 (241)
202 d2atva1 c.37.1.8 (A:5-172) Ras 85.9 0.18 1.3E-05 46.0 3.0 22 210-231 5-26 (168)
203 d2fn4a1 c.37.1.8 (A:24-196) r- 85.8 0.17 1.3E-05 46.4 2.8 24 208-231 7-30 (173)
204 d1n0wa_ c.37.1.11 (A:) DNA rep 85.6 0.65 4.7E-05 44.3 7.4 49 206-254 22-71 (242)
205 d1ky3a_ c.37.1.8 (A:) Rab-rela 85.6 0.19 1.4E-05 46.2 3.0 22 209-230 4-25 (175)
206 d1htwa_ c.37.1.18 (A:) Hypothe 85.6 0.22 1.6E-05 44.2 3.1 28 206-233 32-59 (158)
207 d2erya1 c.37.1.8 (A:10-180) r- 85.3 0.19 1.4E-05 46.0 2.8 22 209-230 7-28 (171)
208 d1c1ya_ c.37.1.8 (A:) Rap1A {H 85.3 0.2 1.5E-05 45.6 3.0 22 210-231 6-27 (167)
209 d2bmea1 c.37.1.8 (A:6-179) Rab 85.2 0.19 1.4E-05 46.1 2.8 22 209-230 7-28 (174)
210 d2f9la1 c.37.1.8 (A:8-182) Rab 85.0 0.21 1.5E-05 45.9 3.0 22 209-230 6-27 (175)
211 d1u0la2 c.37.1.8 (A:69-293) Pr 84.9 0.32 2.3E-05 46.0 4.2 36 186-232 85-120 (225)
212 d1xtqa1 c.37.1.8 (A:3-169) GTP 84.8 0.25 1.8E-05 44.9 3.4 23 208-230 5-27 (167)
213 d1um8a_ c.37.1.20 (A:) ClpX {H 84.8 0.28 2E-05 50.9 4.1 25 206-230 67-91 (364)
214 d1g3qa_ c.37.1.10 (A:) Cell di 84.8 0.24 1.8E-05 48.1 3.5 37 208-249 3-40 (237)
215 d1ctqa_ c.37.1.8 (A:) cH-p21 R 84.7 0.21 1.5E-05 45.4 2.8 21 210-230 6-26 (166)
216 d1udxa2 c.37.1.8 (A:157-336) O 84.7 0.16 1.1E-05 47.1 1.9 21 210-230 4-24 (180)
217 d1l7vc_ c.37.1.12 (C:) ABC tra 84.7 0.18 1.3E-05 48.6 2.3 22 208-229 26-47 (231)
218 d1moza_ c.37.1.8 (A:) ADP-ribo 84.6 0.25 1.8E-05 45.7 3.3 25 205-230 16-40 (182)
219 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 84.4 0.22 1.6E-05 45.9 2.8 23 209-231 4-26 (177)
220 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 84.4 0.23 1.7E-05 45.3 3.0 21 210-230 6-26 (170)
221 d2i1qa2 c.37.1.11 (A:65-322) D 84.2 0.52 3.8E-05 46.0 5.8 59 206-265 33-102 (258)
222 d1zj6a1 c.37.1.8 (A:2-178) ADP 83.9 0.25 1.8E-05 45.4 3.0 22 209-230 17-38 (177)
223 d2qtvb1 c.37.1.8 (B:24-189) SA 83.9 0.25 1.8E-05 44.5 3.0 23 209-231 2-24 (166)
224 d2bcgy1 c.37.1.8 (Y:3-196) GTP 83.9 0.24 1.7E-05 46.5 2.8 23 209-231 8-30 (194)
225 d2g6ba1 c.37.1.8 (A:58-227) Ra 83.8 0.26 1.9E-05 45.0 3.0 22 209-230 8-29 (170)
226 d2atxa1 c.37.1.8 (A:9-193) Rho 83.8 0.24 1.8E-05 46.0 2.8 23 209-231 11-33 (185)
227 d2cxxa1 c.37.1.8 (A:2-185) GTP 83.6 0.26 1.9E-05 45.6 2.9 22 209-230 2-23 (184)
228 d2g3ya1 c.37.1.8 (A:73-244) GT 83.5 0.28 2E-05 44.8 3.1 22 209-230 5-26 (172)
229 d1mh1a_ c.37.1.8 (A:) Rac {Hum 83.4 0.34 2.5E-05 44.8 3.7 23 209-231 7-29 (183)
230 d1u8za_ c.37.1.8 (A:) Ras-rela 83.3 0.28 2E-05 44.6 3.0 24 207-230 4-27 (168)
231 d1zd9a1 c.37.1.8 (A:18-181) AD 83.1 0.29 2.1E-05 44.3 3.0 22 210-231 5-26 (164)
232 d1nrjb_ c.37.1.8 (B:) Signal r 83.1 0.3 2.2E-05 46.3 3.2 22 209-230 5-26 (209)
233 d1a1va1 c.37.1.14 (A:190-325) 83.0 1.6 0.00012 37.5 8.1 53 205-266 6-58 (136)
234 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 82.9 0.29 2.1E-05 45.3 3.0 21 210-230 5-25 (184)
235 d2jdia3 c.37.1.11 (A:95-379) C 82.9 0.99 7.2E-05 44.4 7.1 101 189-298 57-177 (285)
236 d2fh5b1 c.37.1.8 (B:63-269) Si 82.9 0.28 2E-05 46.5 2.9 23 209-231 2-24 (207)
237 d1svsa1 c.37.1.8 (A:32-60,A:18 82.9 0.28 2E-05 45.8 2.9 21 210-230 5-25 (195)
238 d1x3sa1 c.37.1.8 (A:2-178) Rab 82.8 0.3 2.2E-05 44.9 3.0 21 210-230 10-30 (177)
239 d1lnza2 c.37.1.8 (A:158-342) O 82.8 0.21 1.5E-05 46.4 1.9 22 209-230 3-24 (185)
240 d1wmsa_ c.37.1.8 (A:) Rab9a {H 82.8 0.3 2.2E-05 44.8 3.0 22 209-230 8-29 (174)
241 d1x1ra1 c.37.1.8 (A:10-178) Ra 82.6 0.31 2.2E-05 44.4 3.0 22 210-231 7-28 (169)
242 d1m7ba_ c.37.1.8 (A:) RhoE (RN 82.5 0.29 2.1E-05 45.1 2.8 22 210-231 5-26 (179)
243 d1i2ma_ c.37.1.8 (A:) Ran {Hum 82.5 0.19 1.4E-05 45.9 1.5 22 209-230 5-26 (170)
244 d1zcba2 c.37.1.8 (A:47-75,A:20 82.4 0.29 2.1E-05 45.9 2.9 19 209-227 4-22 (200)
245 d1e0sa_ c.37.1.8 (A:) ADP-ribo 82.0 0.25 1.8E-05 45.2 2.1 26 205-231 11-36 (173)
246 d2bmja1 c.37.1.8 (A:66-240) Ce 82.0 0.34 2.5E-05 44.4 3.0 24 208-231 6-29 (175)
247 d2gj8a1 c.37.1.8 (A:216-376) P 81.9 0.34 2.5E-05 43.6 3.0 21 210-230 4-24 (161)
248 d1mkya2 c.37.1.8 (A:173-358) P 81.8 0.35 2.6E-05 44.8 3.1 25 206-231 8-32 (186)
249 d2ngra_ c.37.1.8 (A:) CDC42 {H 81.7 0.32 2.4E-05 45.3 2.8 22 210-231 6-27 (191)
250 d1wb9a2 c.37.1.12 (A:567-800) 80.9 5 0.00037 37.9 11.4 111 207-333 41-168 (234)
251 d1kkma_ c.91.1.2 (A:) HPr kina 80.7 0.41 3E-05 43.3 3.0 23 208-230 15-37 (176)
252 d1knxa2 c.91.1.2 (A:133-309) H 79.8 0.45 3.3E-05 43.0 2.9 23 208-230 16-38 (177)
253 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 79.8 0.36 2.7E-05 45.2 2.5 22 209-230 4-25 (200)
254 d2fu5c1 c.37.1.8 (C:3-175) Rab 79.7 0.28 2.1E-05 44.8 1.6 22 209-230 8-29 (173)
255 d1h65a_ c.37.1.8 (A:) Chloropl 78.9 1 7.4E-05 44.0 5.6 41 185-231 16-56 (257)
256 d1azta2 c.37.1.8 (A:35-65,A:20 78.5 0.48 3.5E-05 45.3 2.9 22 208-229 7-28 (221)
257 d1puia_ c.37.1.8 (A:) Probable 78.5 0.37 2.7E-05 44.5 2.0 26 205-230 14-39 (188)
258 d1ko7a2 c.91.1.2 (A:130-298) H 78.4 0.51 3.7E-05 42.4 2.8 23 208-230 16-38 (169)
259 d1nlfa_ c.37.1.11 (A:) Hexamer 76.7 0.58 4.2E-05 46.4 3.1 23 208-230 30-52 (274)
260 d2bv3a2 c.37.1.8 (A:7-282) Elo 76.3 0.64 4.6E-05 45.7 3.1 26 205-230 4-29 (276)
261 d1g41a_ c.37.1.20 (A:) HslU {H 76.3 0.56 4.1E-05 49.9 2.9 24 209-232 51-74 (443)
262 d1p6xa_ c.37.1.1 (A:) Thymidin 75.9 0.77 5.6E-05 46.5 3.7 26 207-232 6-31 (333)
263 d1tf7a1 c.37.1.11 (A:14-255) C 75.8 0.65 4.7E-05 44.8 3.1 42 206-251 25-66 (242)
264 d1byia_ c.37.1.10 (A:) Dethiob 75.7 0.68 5E-05 44.0 3.2 24 208-231 2-26 (224)
265 d1wb1a4 c.37.1.8 (A:1-179) Elo 75.3 5.1 0.00037 36.0 9.3 22 209-230 7-28 (179)
266 d1e2ka_ c.37.1.1 (A:) Thymidin 75.2 0.65 4.8E-05 46.8 2.9 25 207-231 4-28 (329)
267 d2dy1a2 c.37.1.8 (A:8-274) Elo 74.1 0.85 6.2E-05 44.6 3.3 22 207-228 2-23 (267)
268 d1xzpa2 c.37.1.8 (A:212-371) T 72.9 0.28 2.1E-05 44.1 -0.6 21 210-230 3-23 (160)
269 g1f2t.1 c.37.1.12 (A:,B:) Rad5 72.0 1 7.5E-05 44.8 3.6 21 208-228 24-44 (292)
270 d1f5na2 c.37.1.8 (A:7-283) Int 71.2 1.7 0.00013 42.6 4.9 27 205-231 30-56 (277)
271 d1g6oa_ c.37.1.11 (A:) Hexamer 70.8 0.96 7E-05 45.7 2.9 23 209-231 168-190 (323)
272 d1tuea_ c.37.1.20 (A:) Replica 70.4 1.3 9.3E-05 40.6 3.3 37 187-230 40-76 (205)
273 d1u0ja_ c.37.1.20 (A:) Rep 40 68.4 2.1 0.00015 41.7 4.8 27 204-230 101-127 (267)
274 d1osna_ c.37.1.1 (A:) Thymidin 67.5 0.99 7.2E-05 45.6 2.1 26 207-232 5-30 (331)
275 d1t9ha2 c.37.1.8 (A:68-298) Pr 67.3 0.54 3.9E-05 44.6 0.0 23 209-231 99-121 (231)
276 d1g7sa4 c.37.1.8 (A:1-227) Ini 67.0 1.4 0.0001 42.0 3.1 23 208-230 6-28 (227)
277 d1ewqa2 c.37.1.12 (A:542-765) 66.5 10 0.00076 35.3 9.3 107 209-333 37-161 (224)
278 d1p9ra_ c.37.1.11 (A:) Extrace 62.4 4 0.00029 42.4 5.9 26 206-231 157-182 (401)
279 g1ii8.1 c.37.1.12 (A:,B:) Rad5 61.8 2 0.00015 43.9 3.5 21 208-228 24-44 (369)
280 d2c78a3 c.37.1.8 (A:9-212) Elo 59.2 2.3 0.00017 39.6 2.9 20 210-229 6-25 (204)
281 d1jala1 c.37.1.8 (A:1-278) Ych 58.9 2.2 0.00016 42.0 2.9 22 209-230 4-25 (278)
282 d1n0ua2 c.37.1.8 (A:3-343) Elo 57.9 2.9 0.00021 42.2 3.6 25 205-229 15-39 (341)
283 d1pjra1 c.37.1.19 (A:1-318) DE 57.7 2.1 0.00015 43.2 2.5 16 210-225 27-42 (318)
284 d1uaaa1 c.37.1.19 (A:2-307) DE 57.1 2 0.00015 42.9 2.3 16 209-224 16-31 (306)
285 d1qhla_ c.37.1.12 (A:) Cell di 56.9 1.1 7.7E-05 42.0 0.0 21 209-229 26-46 (222)
286 d1puja_ c.37.1.8 (A:) Probable 56.3 2.9 0.00021 41.0 3.3 27 206-232 111-137 (273)
287 d1ni3a1 c.37.1.8 (A:11-306) Yc 55.3 3.5 0.00026 40.9 3.8 22 209-230 12-33 (296)
288 g1xew.1 c.37.1.12 (X:,Y:) Smc 54.8 2.4 0.00017 43.0 2.4 21 208-228 27-47 (329)
289 d1tq4a_ c.37.1.8 (A:) Interfer 50.4 3.8 0.00028 42.6 3.2 21 209-229 58-78 (400)
290 d1wxqa1 c.37.1.8 (A:1-319) GTP 49.2 3.7 0.00027 41.3 2.7 21 210-230 3-23 (319)
291 d1g8fa3 c.37.1.15 (A:390-511) 46.9 5.3 0.00038 32.9 2.7 24 208-231 7-30 (122)
292 d1p3da1 c.5.1.1 (A:11-106) UDP 44.5 6.8 0.00049 30.9 3.1 25 206-230 7-31 (96)
293 d1d2ea3 c.37.1.8 (A:55-250) El 43.5 5.8 0.00042 36.3 2.9 19 210-228 6-24 (196)
294 d2olra1 c.91.1.1 (A:228-540) P 42.7 5.5 0.0004 39.0 2.6 18 208-225 15-32 (313)
295 d1e69a_ c.37.1.12 (A:) Smc hea 39.9 5.1 0.00037 39.8 2.1 21 208-228 25-45 (308)
296 d1j3ba1 c.91.1.1 (A:212-529) P 38.9 6.1 0.00044 38.8 2.3 18 208-225 15-32 (318)
297 d1ii2a1 c.91.1.1 (A:201-523) P 38.2 7.1 0.00051 38.4 2.6 16 209-224 16-31 (323)
298 d1kk1a3 c.37.1.8 (A:6-200) Ini 38.2 7.8 0.00057 35.3 2.9 21 209-229 7-27 (195)
299 d1w1wa_ c.37.1.12 (A:) Smc hea 37.3 8.1 0.00059 40.3 3.3 20 209-228 27-46 (427)
300 d1jnya3 c.37.1.8 (A:4-227) Elo 37.0 7.7 0.00056 36.3 2.7 20 210-229 6-25 (224)
301 d2eyqa3 c.37.1.19 (A:546-778) 35.1 57 0.0042 30.1 8.6 40 183-230 60-99 (233)
302 d1e9ra_ c.37.1.11 (A:) Bacteri 34.2 7.8 0.00057 40.7 2.5 22 209-230 52-73 (433)
303 d2qn6a3 c.37.1.8 (A:2-206) Ini 34.0 9.9 0.00072 34.9 2.9 21 209-229 10-30 (205)
304 d1zunb3 c.37.1.8 (B:16-237) Su 33.9 10 0.00073 35.4 2.9 25 207-231 9-33 (222)
305 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 30.8 11 0.00081 29.0 2.2 21 210-230 4-24 (89)
306 d1f60a3 c.37.1.8 (A:2-240) Elo 27.3 14 0.001 34.8 2.7 21 209-229 8-28 (239)
307 d1yksa1 c.37.1.14 (A:185-324) 27.0 7.3 0.00053 32.8 0.5 18 208-225 8-25 (140)
308 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 26.5 13 0.00091 41.2 2.5 16 210-225 27-42 (623)
309 d1gm5a3 c.37.1.19 (A:286-549) 25.5 22 0.0016 33.9 3.7 38 184-229 89-126 (264)
310 d1r5ba3 c.37.1.8 (A:215-459) E 25.0 12 0.00091 35.3 1.8 20 210-229 27-46 (245)
311 d2dtge5 c.10.2.5 (E:312-467) I 25.0 40 0.0029 28.9 5.2 33 1041-1073 88-123 (156)
312 d1c9ka_ c.37.1.11 (A:) Adenosy 23.6 34 0.0025 30.2 4.4 36 209-253 1-36 (180)
313 d2fz4a1 c.37.1.19 (A:24-229) D 23.6 39 0.0028 30.6 5.1 41 180-231 69-109 (206)
314 d2akab1 c.37.1.8 (B:6-304) Dyn 23.1 38 0.0028 32.7 5.3 26 206-231 25-50 (299)
315 d2jfga1 c.5.1.1 (A:1-93) UDP-N 23.0 19 0.0014 27.8 2.3 21 209-230 7-27 (93)
316 d1wp9a1 c.37.1.19 (A:1-200) pu 22.6 22 0.0016 32.1 3.0 18 211-228 27-44 (200)
317 d2p6ra3 c.37.1.19 (A:1-202) He 22.4 14 0.001 33.7 1.5 17 210-226 43-59 (202)
318 d1hv8a1 c.37.1.19 (A:3-210) Pu 20.1 1.6E+02 0.011 26.1 8.8 19 210-228 45-63 (208)
No 1
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=9.9e-39 Score=339.61 Aligned_cols=252 Identities=16% Similarity=0.184 Sum_probs=196.8
Q ss_pred CCCCCcceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCC
Q 047598 173 SVPTERAVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVF 252 (1112)
Q Consensus 173 ~~~~~~~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~ 252 (1112)
..|.++.+|||+.++++|+++|... .+...++|+|+||||+||||||+++|++.... ...+|++++||++++.+
T Consensus 15 ~~p~~~~~~gR~~~~~~i~~~L~~~-----~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~-~~~~f~~~~Wv~vs~~~ 88 (277)
T d2a5yb3 15 NVPKQMTCYIREYHVDRVIKKLDEM-----CDLDSFFLFLHGRAGSGKSVIASQALSKSDQL-IGINYDSIVWLKDSGTA 88 (277)
T ss_dssp TCBCCCCSCCCHHHHHHHHHHHHHH-----TTSSSEEEEEECSTTSSHHHHHHHHHHHCSST-BTTTBSEEEEEECCCCS
T ss_pred CCCCCCceeCcHHHHHHHHHHHHhc-----cCCCceEEEEECCCCCCHHHHHHHHHHhhhhh-hhhcCceEEEEEecCCC
Confidence 3445667899999999999999651 23457899999999999999999999875421 12789999999999999
Q ss_pred CHHHHHHHHHHHh---cCCCC-------CCCChHHHHHHHHHHhCCCcEEEEEeCCCCCChhhHHHHHhcccCCCCCcEE
Q 047598 253 DVLSISKALLESI---TRKPC-------HLNTLNEVQVDLKTAVDGKRFLLVLDDVWNEDYSLWVDLKAPLLAAAPNSKM 322 (1112)
Q Consensus 253 ~~~~~~~~il~~l---~~~~~-------~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~i 322 (1112)
+...+...+...+ +.... ...........+...+.++|+|+||||||+. ..|..+. ..||||
T Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~--~~~~~~~------~~~sri 160 (277)
T d2a5yb3 89 PKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQE--ETIRWAQ------ELRLRC 160 (277)
T ss_dssp TTHHHHHHHHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCH--HHHHHHH------HTTCEE
T ss_pred CHHHHHHHHHHHHHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHH--hhhhhhc------ccCceE
Confidence 8777766665443 22110 1122334445678889999999999999986 4444332 258999
Q ss_pred EEEcCChhhhhhcCCC-ceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCchHHHHHHhhhhcCCCH
Q 047598 323 IITTRHSHVASTMGPI-KHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLPLAAKSLGGLLRTTRC 401 (1112)
Q Consensus 323 ivTTR~~~v~~~~~~~-~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glPlai~~~~~~l~~~~~ 401 (1112)
|||||+..++..+... +.|+|++|+.+|||+||.+++|.... .+..++++++|+++|+|+||||+++|+.|+.++.
T Consensus 161 lvTTR~~~v~~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~---~~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~k~~ 237 (277)
T d2a5yb3 161 LVTTRDVEISNAASQTCEFIEVTSLEIDECYDFLEAYGMPMPV---GEKEEDVLNKTIELSSGNPATLMMFFKSCEPKTF 237 (277)
T ss_dssp EEEESBGGGGGGCCSCEEEEECCCCCHHHHHHHHHHTSCCCC-----CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSSSH
T ss_pred EEEeehHHHHHhcCCCCceEECCCCCHHHHHHHHHHHhCCccC---chhhHHHHHHHHHHhCCCHHHHHHHHHHhccCCH
Confidence 9999999999876644 67999999999999999999876533 3445778999999999999999999999999998
Q ss_pred HHHHHHHhccccCCCCCCCchHHHHHHhcCCchHHHHHHhHh
Q 047598 402 DLWEDILDSKIWDLPQQSGILPVLRLSYHHLPSYLKRCFAYC 443 (1112)
Q Consensus 402 ~~w~~~l~~~~~~~~~~~~i~~~l~~sy~~L~~~~k~cfl~~ 443 (1112)
+.|....+..... ...++.+++.+||++||+++|+||-++
T Consensus 238 ~~~~~~~~~L~~~--~~~~v~~il~~sY~~L~~~lk~c~~~l 277 (277)
T d2a5yb3 238 EKMAQLNNKLESR--GLVGVECITPYSYKSLAMALQRCVEVL 277 (277)
T ss_dssp HHHHHHHHHHHHH--CSSTTCCCSSSSSSSHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhcC--cHHHHHHHHHHHHhcccHHHHHHHHhC
Confidence 9998876643221 236788899999999999999999764
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.83 E-value=4.5e-20 Score=208.51 Aligned_cols=342 Identities=20% Similarity=0.264 Sum_probs=191.2
Q ss_pred cCCcccEEEecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccccCCccccEEee
Q 047598 590 KFKRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLDI 669 (1112)
Q Consensus 590 ~~~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L 669 (1112)
.+.+|++|+++++.|..+ +++..+++|++|+|++|.|+.+|+ +++|++|++|++++| .+..++. ++.+++|+.|++
T Consensus 42 ~l~~l~~L~l~~~~I~~l-~gl~~L~nL~~L~Ls~N~l~~l~~-l~~L~~L~~L~L~~n-~i~~i~~-l~~l~~L~~L~~ 117 (384)
T d2omza2 42 DLDQVTTLQADRLGIKSI-DGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNN-QIADITP-LANLTNLTGLTL 117 (384)
T ss_dssp HHTTCCEEECCSSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSS-CCCCCGG-GTTCTTCCEEEC
T ss_pred HhCCCCEEECCCCCCCCc-cccccCCCCCEEeCcCCcCCCCcc-ccCCccccccccccc-ccccccc-cccccccccccc
Confidence 457899999999999887 578889999999999999999875 899999999999998 6766665 889999999999
Q ss_pred cCCCccccCCCCCCCCCCCCccCeeeeccCCcccCccccccccccCCeeEEecccCCCChhhhhhccccCccccCceEEE
Q 047598 670 KGANLLREMPLGMKELKNLRTLSNFIVGKGEAISGLEDLKNLKFLGGELCISGLENVNDSQKVREATLCEKENLKTLSLE 749 (1112)
Q Consensus 670 ~~~~~l~~lp~~i~~l~~L~~L~~~~~~~~~~~~~l~~l~~L~~L~~~l~i~~l~~~~~~~~~~~~~l~~~~~L~~L~l~ 749 (1112)
+++. ...++. ......+..+....+..... ....... ........
T Consensus 118 ~~~~-~~~~~~-~~~~~~~~~~~~~~~~l~~~----~~~~~~~-----------------------------~~~~~~~~ 162 (384)
T d2omza2 118 FNNQ-ITDIDP-LKNLTNLNRLELSSNTISDI----SALSGLT-----------------------------SLQQLSFG 162 (384)
T ss_dssp CSSC-CCCCGG-GTTCTTCSEEEEEEEEECCC----GGGTTCT-----------------------------TCSEEEEE
T ss_pred cccc-cccccc-cccccccccccccccccccc----ccccccc-----------------------------cccccccc
Confidence 8887 333332 22333444333333222111 0000000 00000000
Q ss_pred eCCCCCCCchhhhhhHHHhhccCCCCCCCCceEEEeccCCCCCCCccCCCCCCceeEEEEcCcCCCCCCCCCCCCCCcce
Q 047598 750 WGSQFDNSQDEVMEEYAVGVLDKLQPHKCIKNLTIKQYNGARFPSWLGDPLFSKMEVLKLENCWNCTSLPSLGLLSSLRE 829 (1112)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~~~p~~~~~~~l~~L~~L~L~~~~~~~~l~~l~~l~~L~~ 829 (1112)
... .....+.............+.. ..+.... .++++..+++++|.+.. +++.+..++|+.
T Consensus 163 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~l~~~~~l~l~~n~i~~-~~~~~~~~~L~~ 223 (384)
T d2omza2 163 NQV---------------TDLKPLANLTTLERLDISSNKV-SDISVLA--KLTNLESLIATNNQISD-ITPLGILTNLDE 223 (384)
T ss_dssp ESC---------------CCCGGGTTCTTCCEEECCSSCC-CCCGGGG--GCTTCSEEECCSSCCCC-CGGGGGCTTCCE
T ss_pred ccc---------------chhhhhcccccccccccccccc-ccccccc--cccccceeeccCCccCC-CCcccccCCCCE
Confidence 000 0000001111111111111111 1122222 26677777777776443 344566677788
Q ss_pred EEecCCCCceecCccccCCCCcccCcccceeecCCCCcccccccccCCCCcCCcccCCCccceEeEecCCCCCCCCCCCC
Q 047598 830 LTIQGLTKLKSIGSEVYGKGFSKPFQSLEILSFENLPEWEYWDTNIKGNDHADRVEIFPRLHKLSIMECPKLSGKLPELL 909 (1112)
Q Consensus 830 L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~p~L~~L~l~~c~~L~~~~p~~~ 909 (1112)
|++++|. ++.++ .+. .+++|+.|+++++. +.. ...+..+++|+.|++++ +++++ ++
T Consensus 224 L~l~~n~-l~~~~-~l~------~l~~L~~L~l~~n~-l~~----------~~~~~~~~~L~~L~l~~-~~l~~-~~--- 279 (384)
T d2omza2 224 LSLNGNQ-LKDIG-TLA------SLTNLTDLDLANNQ-ISN----------LAPLSGLTKLTELKLGA-NQISN-IS--- 279 (384)
T ss_dssp EECCSSC-CCCCG-GGG------GCTTCSEEECCSSC-CCC----------CGGGTTCTTCSEEECCS-SCCCC-CG---
T ss_pred EECCCCC-CCCcc-hhh------cccccchhccccCc-cCC----------CCcccccccCCEeeccC-cccCC-CC---
Confidence 8887763 33332 111 15666666666531 111 11235567777777766 45542 11
Q ss_pred CCcceeEEeEEEEeccCCcccCcccCCCCCCcCEEEEecCCCCcccCCCCCCCCCCeEEEcCCcccccccccccCCCCCC
Q 047598 910 PSLETLVVATFVIANCEKLEALPNDMHRLNFLEHLRIGQCPSILSFPEEGFPTNLASLVIGGDVKMYKGLIQWGLHRLTA 989 (1112)
Q Consensus 910 ~~L~~L~~~~L~~~~~~~l~~lp~~l~~l~~L~~L~L~~~~~l~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~ 989 (1112)
.+..++.++.+.++.|. +..++....+++++.|++++|. ..+.. .+..+++
T Consensus 280 ------------------------~~~~~~~l~~l~~~~n~-l~~~~~~~~~~~l~~L~ls~n~--l~~l~--~l~~l~~ 330 (384)
T d2omza2 280 ------------------------PLAGLTALTNLELNENQ-LEDISPISNLKNLTYLTLYFNN--ISDIS--PVSSLTK 330 (384)
T ss_dssp ------------------------GGTTCTTCSEEECCSSC-CSCCGGGGGCTTCSEEECCSSC--CSCCG--GGGGCTT
T ss_pred ------------------------ccccccccccccccccc-cccccccchhcccCeEECCCCC--CCCCc--ccccCCC
Confidence 12344555555555553 2223333345566666666652 22221 2566778
Q ss_pred cCEEEEcccCCccccccCcccccccCCCCccEEEecCCCCCCcCCCCCCCCeEEeecCCCCCcCCCCCCCCCccEEEEcc
Q 047598 990 LRRLEIDGCHDDEVECFPNEEMGVMLPSSLTHLTIAGFKKLKKLSLMTSLEYLWIKNCPNLASFPELGLPSSLTQLYIDH 1069 (1112)
Q Consensus 990 L~~L~l~~n~~~~l~~l~~~~~~~~~~~sL~~L~l~~~~~L~~l~~l~~L~~L~ls~c~~l~~lp~~~~~~~L~~L~l~~ 1069 (1112)
|++|++++|+ ++.++ .+..+++|++|++++| .++.++.+..+++|++|+|++
T Consensus 331 L~~L~L~~n~---l~~l~------------------------~l~~l~~L~~L~l~~N-~l~~l~~l~~l~~L~~L~L~~ 382 (384)
T d2omza2 331 LQRLFFANNK---VSDVS------------------------SLANLTNINWLSAGHN-QISDLTPLANLTRITQLGLND 382 (384)
T ss_dssp CCEEECCSSC---CCCCG------------------------GGGGCTTCCEEECCSS-CCCBCGGGTTCTTCSEEECCC
T ss_pred CCEEECCCCC---CCCCh------------------------hHcCCCCCCEEECCCC-cCCCChhhccCCCCCEeeCCC
Confidence 8888888775 22222 1224788889999888 455666677888999999887
Q ss_pred C
Q 047598 1070 C 1070 (1112)
Q Consensus 1070 c 1070 (1112)
|
T Consensus 383 N 383 (384)
T d2omza2 383 Q 383 (384)
T ss_dssp E
T ss_pred C
Confidence 6
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75 E-value=1.2e-17 Score=188.20 Aligned_cols=102 Identities=19% Similarity=0.314 Sum_probs=77.4
Q ss_pred cCCCcceeccccccCCcccccccccccccccccCCcccEEEecccccccccccccCCCcCcEEEccccccccccccccCC
Q 047598 558 QTENLRTFLPIRIRGGTICSYITGIVLSDLLPKFKRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSL 637 (1112)
Q Consensus 558 ~~~~lr~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L 637 (1112)
++.++++|.+.++. +. .+ ..+..+++|++|+|++|.++.+|. ++++++|++|++++|.+..+++ ++++
T Consensus 42 ~l~~l~~L~l~~~~-------I~-~l--~gl~~L~nL~~L~Ls~N~l~~l~~-l~~L~~L~~L~L~~n~i~~i~~-l~~l 109 (384)
T d2omza2 42 DLDQVTTLQADRLG-------IK-SI--DGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP-LANL 109 (384)
T ss_dssp HHTTCCEEECCSSC-------CC-CC--TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG-GTTC
T ss_pred HhCCCCEEECCCCC-------CC-Cc--cccccCCCCCEEeCcCCcCCCCcc-ccCCcccccccccccccccccc-cccc
Confidence 44567777776542 11 11 226778999999999999999874 9999999999999999998864 8999
Q ss_pred CCCcEEeecCCCCCcccCccccCCccccEEeecCCC
Q 047598 638 LNLEILILRNCSRLKKLPSKMRNLINLHHLDIKGAN 673 (1112)
Q Consensus 638 ~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L~~~~ 673 (1112)
++|++|+++++ .+..++. ......+..+....+.
T Consensus 110 ~~L~~L~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~ 143 (384)
T d2omza2 110 TNLTGLTLFNN-QITDIDP-LKNLTNLNRLELSSNT 143 (384)
T ss_dssp TTCCEEECCSS-CCCCCGG-GTTCTTCSEEEEEEEE
T ss_pred ccccccccccc-ccccccc-cccccccccccccccc
Confidence 99999999987 5665554 4455666666666554
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.75 E-value=3.6e-17 Score=177.34 Aligned_cols=98 Identities=26% Similarity=0.314 Sum_probs=75.8
Q ss_pred cccEEEecccccccccccccCCCcCcEEEccccccccccc-cccCCCCCcEEeecCCCCCcccCccccCCccccEEeecC
Q 047598 593 RLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPE-STNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLDIKG 671 (1112)
Q Consensus 593 ~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~-~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L~~ 671 (1112)
.+++++-++..++++|..+. +++++|+|++|.|+.+|+ +|.++++|++|++++|......|..|..+++|++|++++
T Consensus 11 ~~~~~~C~~~~L~~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 88 (305)
T ss_dssp ETTEEECTTSCCCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCEEEecCCCCCccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccC
Confidence 56778888888899988774 589999999999999986 588999999999999854444466788999999999999
Q ss_pred CCccccCCCCCCCCCCCCccCeee
Q 047598 672 ANLLREMPLGMKELKNLRTLSNFI 695 (1112)
Q Consensus 672 ~~~l~~lp~~i~~l~~L~~L~~~~ 695 (1112)
|. ++.+|..+ ...|..|....
T Consensus 89 n~-l~~l~~~~--~~~l~~L~~~~ 109 (305)
T d1xkua_ 89 NQ-LKELPEKM--PKTLQELRVHE 109 (305)
T ss_dssp SC-CSBCCSSC--CTTCCEEECCS
T ss_pred Cc-cCcCccch--hhhhhhhhccc
Confidence 98 67777643 23455554433
No 5
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.73 E-value=1.1e-18 Score=190.19 Aligned_cols=106 Identities=19% Similarity=0.256 Sum_probs=84.9
Q ss_pred CcccEEEecccccc---cccccccCCCcCcEEEccc-cccc-cccccccCCCCCcEEeecCCCCCcccCccccCCccccE
Q 047598 592 KRLRVLSLQRYYIG---ELLVSFEDLKLLRYLNLAD-TMIR-TLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHH 666 (1112)
Q Consensus 592 ~~L~~L~L~~~~~~---~lp~~~~~l~~Lr~L~Ls~-n~i~-~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~ 666 (1112)
..++.|+|+++.+. .+|..+++|++|++|+|++ |.+. .+|++|++|++|++|+|++|......|..+..+.+|++
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 45788899988775 5788899999999999986 6666 78999999999999999998544555666888889999
Q ss_pred EeecCCCccccCCCCCCCCCCCCccCeeeec
Q 047598 667 LDIKGANLLREMPLGMKELKNLRTLSNFIVG 697 (1112)
Q Consensus 667 L~L~~~~~l~~lp~~i~~l~~L~~L~~~~~~ 697 (1112)
+++++|.....+|..++++++|+++++..+.
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~ 160 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred cccccccccccCchhhccCcccceeeccccc
Confidence 9999888777788778888888777765543
No 6
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.71 E-value=1.1e-15 Score=169.66 Aligned_cols=98 Identities=19% Similarity=0.197 Sum_probs=74.8
Q ss_pred CcccEEEecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccccCCccccEEeecC
Q 047598 592 KRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLDIKG 671 (1112)
Q Consensus 592 ~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L~~ 671 (1112)
.++++|||+++.++.+|+. +++|++|+|++|+|+.+|..+ .+|+.|++++| .+..++. + .++|++|++++
T Consensus 38 ~~l~~LdLs~~~L~~lp~~---~~~L~~L~Ls~N~l~~lp~~~---~~L~~L~l~~n-~l~~l~~-l--p~~L~~L~L~~ 107 (353)
T d1jl5a_ 38 RQAHELELNNLGLSSLPEL---PPHLESLVASCNSLTELPELP---QSLKSLLVDNN-NLKALSD-L--PPLLEYLGVSN 107 (353)
T ss_dssp HTCSEEECTTSCCSCCCSC---CTTCSEEECCSSCCSSCCCCC---TTCCEEECCSS-CCSCCCS-C--CTTCCEEECCS
T ss_pred cCCCEEEeCCCCCCCCCCC---CCCCCEEECCCCCCcccccch---hhhhhhhhhhc-ccchhhh-h--ccccccccccc
Confidence 3588899999999888864 468899999999999998764 57888888887 5666654 1 14689999999
Q ss_pred CCccccCCCCCCCCCCCCccCeeeeccCCc
Q 047598 672 ANLLREMPLGMKELKNLRTLSNFIVGKGEA 701 (1112)
Q Consensus 672 ~~~l~~lp~~i~~l~~L~~L~~~~~~~~~~ 701 (1112)
|. +..+|. ++.+++|+.|++..+.....
T Consensus 108 n~-l~~lp~-~~~l~~L~~L~l~~~~~~~~ 135 (353)
T d1jl5a_ 108 NQ-LEKLPE-LQNSSFLKIIDVDNNSLKKL 135 (353)
T ss_dssp SC-CSSCCC-CTTCTTCCEEECCSSCCSCC
T ss_pred cc-cccccc-hhhhccceeecccccccccc
Confidence 88 677774 67888898888766554433
No 7
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.70 E-value=6.9e-18 Score=183.73 Aligned_cols=228 Identities=15% Similarity=0.144 Sum_probs=143.0
Q ss_pred ccccccCCcccEEEecc-cccc-cccccccCCCcCcEEEccccccccc-cccccCCCCCcEEeecCCCCCcccCccccCC
Q 047598 585 SDLLPKFKRLRVLSLQR-YYIG-ELLVSFEDLKLLRYLNLADTMIRTL-PESTNSLLNLEILILRNCSRLKKLPSKMRNL 661 (1112)
Q Consensus 585 ~~~~~~~~~L~~L~L~~-~~~~-~lp~~~~~l~~Lr~L~Ls~n~i~~l-p~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L 661 (1112)
+..+.++++|++|+|++ |.+. .+|..|++|++|++|+|++|.+..+ |..+..+.+|+++++++|.....+|..++++
T Consensus 69 p~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l 148 (313)
T d1ogqa_ 69 PSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSL 148 (313)
T ss_dssp CGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGC
T ss_pred ChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccC
Confidence 34578899999999987 5664 7999999999999999999998865 4558899999999999997788889999999
Q ss_pred ccccEEeecCCCccccCCCCCCCCCCC-CccCeeeeccCC-cccCccccccccccCCeeEEecccCCCChhhhhhccccC
Q 047598 662 INLHHLDIKGANLLREMPLGMKELKNL-RTLSNFIVGKGE-AISGLEDLKNLKFLGGELCISGLENVNDSQKVREATLCE 739 (1112)
Q Consensus 662 ~~L~~L~L~~~~~l~~lp~~i~~l~~L-~~L~~~~~~~~~-~~~~l~~l~~L~~L~~~l~i~~l~~~~~~~~~~~~~l~~ 739 (1112)
++|+++++++|.+...+|..+..+.++ +.+....+.... .+..+..+..+. + . ...+......+..+..
T Consensus 149 ~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~-l----~----l~~~~~~~~~~~~~~~ 219 (313)
T d1ogqa_ 149 PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAF-V----D----LSRNMLEGDASVLFGS 219 (313)
T ss_dssp TTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSE-E----E----CCSSEEEECCGGGCCT
T ss_pred cccceeecccccccccccccccccccccccccccccccccccccccccccccc-c----c----cccccccccccccccc
Confidence 999999999998777888888887776 555554443322 112222221111 1 0 0011112223334445
Q ss_pred ccccCceEEEeCCCCCCCchhhhhhHHHhhccCCCCCCCCceEEEeccCCC-CCCCccCCCCCCceeEEEEcCcCCCCCC
Q 047598 740 KENLKTLSLEWGSQFDNSQDEVMEEYAVGVLDKLQPHKCIKNLTIKQYNGA-RFPSWLGDPLFSKMEVLKLENCWNCTSL 818 (1112)
Q Consensus 740 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~-~~p~~~~~~~l~~L~~L~L~~~~~~~~l 818 (1112)
+.+++.+++..+.. ...+..+...++++.|++++|... .+|.++.. +++|++|+|++|.+.+.+
T Consensus 220 ~~~l~~l~~~~~~l-------------~~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~--L~~L~~L~Ls~N~l~g~i 284 (313)
T d1ogqa_ 220 DKNTQKIHLAKNSL-------------AFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQ--LKFLHSLNVSFNNLCGEI 284 (313)
T ss_dssp TSCCSEEECCSSEE-------------CCBGGGCCCCTTCCEEECCSSCCEECCCGGGGG--CTTCCEEECCSSEEEEEC
T ss_pred cccccccccccccc-------------cccccccccccccccccCccCeecccCChHHhC--CCCCCEEECcCCcccccC
Confidence 55666665554432 111222333445555555555544 45555543 555555555555555455
Q ss_pred CCCCCCCCcceEEecCCC
Q 047598 819 PSLGLLSSLRELTIQGLT 836 (1112)
Q Consensus 819 ~~l~~l~~L~~L~L~~~~ 836 (1112)
|.++++++|+.+++++|+
T Consensus 285 P~~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 285 PQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp CCSTTGGGSCGGGTCSSS
T ss_pred CCcccCCCCCHHHhCCCc
Confidence 555555555555555544
No 8
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.63 E-value=4.5e-15 Score=160.45 Aligned_cols=258 Identities=16% Similarity=0.189 Sum_probs=162.7
Q ss_pred eEEEeccCCCCCCCccCCCCCCceeEEEEcCcCCCCCCC-CCCCCCCcceEEecCCCCceecCccccCCCCcccCcccce
Q 047598 781 NLTIKQYNGARFPSWLGDPLFSKMEVLKLENCWNCTSLP-SLGLLSSLRELTIQGLTKLKSIGSEVYGKGFSKPFQSLEI 859 (1112)
Q Consensus 781 ~L~l~~~~~~~~p~~~~~~~l~~L~~L~L~~~~~~~~l~-~l~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~ 859 (1112)
.++-++....++|..+ .+++++|+|++|.+....+ .+.++++|++|++++|......+..+.. ++.|+.
T Consensus 14 ~~~C~~~~L~~lP~~l----~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~------l~~L~~ 83 (305)
T d1xkua_ 14 VVQCSDLGLEKVPKDL----PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAP------LVKLER 83 (305)
T ss_dssp EEECTTSCCCSCCCSC----CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTT------CTTCCE
T ss_pred EEEecCCCCCccCCCC----CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhC------CCccCE
Confidence 3444444556677655 3567888888876654443 5777788888888876544433333333 777788
Q ss_pred eecCCCCcccccccccCCCCcCCcccCCCccceEeEecCCCCCCCCCCCCCCcceeEEeEEEEeccCCcccCcccCCCCC
Q 047598 860 LSFENLPEWEYWDTNIKGNDHADRVEIFPRLHKLSIMECPKLSGKLPELLPSLETLVVATFVIANCEKLEALPNDMHRLN 939 (1112)
Q Consensus 860 L~l~~~~~l~~~~~~~~~~~~~~~~~~~p~L~~L~l~~c~~L~~~~p~~~~~L~~L~~~~L~~~~~~~l~~lp~~l~~l~ 939 (1112)
|++++.. ++.+.. ..++.+..|.+.+ +.+.+..+..+.....+.......+........+..+..++
T Consensus 84 L~l~~n~-l~~l~~-----------~~~~~l~~L~~~~-n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~ 150 (305)
T d1xkua_ 84 LYLSKNQ-LKELPE-----------KMPKTLQELRVHE-NEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 150 (305)
T ss_dssp EECCSSC-CSBCCS-----------SCCTTCCEEECCS-SCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCT
T ss_pred ecccCCc-cCcCcc-----------chhhhhhhhhccc-cchhhhhhhhhhccccccccccccccccccCCCcccccccc
Confidence 8877631 222211 3456777787777 56663322223222222221111122222223345567788
Q ss_pred CcCEEEEecCCCCcccCCCCCCCCCCeEEEcCCcccccccccccCCCCCCcCEEEEcccCCccccccCcccccccCCCCc
Q 047598 940 FLEHLRIGQCPSILSFPEEGFPTNLASLVIGGDVKMYKGLIQWGLHRLTALRRLEIDGCHDDEVECFPNEEMGVMLPSSL 1019 (1112)
Q Consensus 940 ~L~~L~L~~~~~l~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~l~~l~~~~~~~~~~~sL 1019 (1112)
+|+.+++++|. +..++. ..+++|+.|++.+| ......+..+..++.+++|++++|. +..++...+.+ .++|
T Consensus 151 ~L~~l~l~~n~-l~~l~~-~~~~~L~~L~l~~n--~~~~~~~~~~~~~~~l~~L~~s~n~---l~~~~~~~~~~--l~~L 221 (305)
T d1xkua_ 151 KLSYIRIADTN-ITTIPQ-GLPPSLTELHLDGN--KITKVDAASLKGLNNLAKLGLSFNS---ISAVDNGSLAN--TPHL 221 (305)
T ss_dssp TCCEEECCSSC-CCSCCS-SCCTTCSEEECTTS--CCCEECTGGGTTCTTCCEEECCSSC---CCEECTTTGGG--STTC
T ss_pred ccCccccccCC-ccccCc-ccCCccCEEECCCC--cCCCCChhHhhcccccccccccccc---ccccccccccc--cccc
Confidence 89999998884 444544 35788999999988 3444556678889999999999886 66666555543 3678
Q ss_pred cEEEecCCCCCCcC----CCCCCCCeEEeecCCCCCcCCC--------CCCCCCccEEEEccCcc
Q 047598 1020 THLTIAGFKKLKKL----SLMTSLEYLWIKNCPNLASFPE--------LGLPSSLTQLYIDHCPL 1072 (1112)
Q Consensus 1020 ~~L~l~~~~~L~~l----~~l~~L~~L~ls~c~~l~~lp~--------~~~~~~L~~L~l~~c~~ 1072 (1112)
++|+++++ .++.+ ..+++|++|++++| .++.++. ...+++|+.|++++||.
T Consensus 222 ~~L~L~~N-~L~~lp~~l~~l~~L~~L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~ 284 (305)
T d1xkua_ 222 RELHLNNN-KLVKVPGGLADHKYIQVVYLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284 (305)
T ss_dssp CEEECCSS-CCSSCCTTTTTCSSCCEEECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred eeeecccc-cccccccccccccCCCEEECCCC-ccCccChhhccCcchhcccCCCCEEECCCCcC
Confidence 88888876 45444 47889999999998 4666652 23467899999999984
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=7.9e-15 Score=154.52 Aligned_cols=193 Identities=21% Similarity=0.154 Sum_probs=113.8
Q ss_pred CcccEEEecccccccccccccCCCcCcEEEccccccccccc-cccCCCCCcEEeecCCCCCcccCccccCCccccEEeec
Q 047598 592 KRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPE-STNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLDIK 670 (1112)
Q Consensus 592 ~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~-~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L~ 670 (1112)
..+...+.+++.++.+|..+. ++|++|+|++|.|+.+|. .|.++++|++|+|++| .+..+|. ++.+++|++|+++
T Consensus 10 ~~~~~v~C~~~~L~~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N-~l~~l~~-~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA-ELTKLQV-DGTLPVLGTLDLS 85 (266)
T ss_dssp TTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTS-CCCEEEC-CSCCTTCCEEECC
T ss_pred CCCeEEEccCCCCCeeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccc-ccccccc-ccccccccccccc
Confidence 344445777777777776654 467777777777777764 4677777777777776 5666664 5667777777777
Q ss_pred CCCccccCCCCCCCCCCCCccCeeeeccCCcccCccccccccccCCeeEEecccCCCChhhhhhccccCccccCceEEEe
Q 047598 671 GANLLREMPLGMKELKNLRTLSNFIVGKGEAISGLEDLKNLKFLGGELCISGLENVNDSQKVREATLCEKENLKTLSLEW 750 (1112)
Q Consensus 671 ~~~~l~~lp~~i~~l~~L~~L~~~~~~~~~~~~~l~~l~~L~~L~~~l~i~~l~~~~~~~~~~~~~l~~~~~L~~L~l~~ 750 (1112)
+|. +...|..+..+++|+.|++..+.....+. ..+..
T Consensus 86 ~N~-l~~~~~~~~~l~~L~~L~l~~~~~~~~~~-------------------------------~~~~~----------- 122 (266)
T d1p9ag_ 86 HNQ-LQSLPLLGQTLPALTVLDVSFNRLTSLPL-------------------------------GALRG----------- 122 (266)
T ss_dssp SSC-CSSCCCCTTTCTTCCEEECCSSCCCCCCS-------------------------------STTTT-----------
T ss_pred ccc-ccccccccccccccccccccccccceeec-------------------------------ccccc-----------
Confidence 776 55556666666666666654433221100 00111
Q ss_pred CCCCCCCchhhhhhHHHhhccCCCCCCCCceEEEeccCCCCCCCccCCCCCCceeEEEEcCcCCCCCCC-CCCCCCCcce
Q 047598 751 GSQFDNSQDEVMEEYAVGVLDKLQPHKCIKNLTIKQYNGARFPSWLGDPLFSKMEVLKLENCWNCTSLP-SLGLLSSLRE 829 (1112)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~~~p~~~~~~~l~~L~~L~L~~~~~~~~l~-~l~~l~~L~~ 829 (1112)
..++..|.+.++....+|..... .+++|+.|++++|.+....+ .++.+++|++
T Consensus 123 -------------------------l~~l~~L~l~~n~l~~l~~~~~~-~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~ 176 (266)
T d1p9ag_ 123 -------------------------LGELQELYLKGNELKTLPPGLLT-PTPKLEKLSLANNNLTELPAGLLNGLENLDT 176 (266)
T ss_dssp -------------------------CTTCCEEECTTSCCCCCCTTTTT-TCTTCCEEECTTSCCSCCCTTTTTTCTTCCE
T ss_pred -------------------------ccccccccccccccceecccccc-ccccchhcccccccccccCccccccccccce
Confidence 22233334444444444433322 25677777777776654443 4666777777
Q ss_pred EEecCCCCceecCccccCCCCcccCcccceeecCC
Q 047598 830 LTIQGLTKLKSIGSEVYGKGFSKPFQSLEILSFEN 864 (1112)
Q Consensus 830 L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~ 864 (1112)
|+|++|. ++.+|..++. +++|+.|++++
T Consensus 177 L~Ls~N~-L~~lp~~~~~------~~~L~~L~L~~ 204 (266)
T d1p9ag_ 177 LLLQENS-LYTIPKGFFG------SHLLPFAFLHG 204 (266)
T ss_dssp EECCSSC-CCCCCTTTTT------TCCCSEEECCS
T ss_pred eecccCC-CcccChhHCC------CCCCCEEEecC
Confidence 7777654 5566655443 55566666655
No 10
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.52 E-value=4.3e-13 Score=148.28 Aligned_cols=87 Identities=24% Similarity=0.253 Sum_probs=69.4
Q ss_pred CCcccEEEecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccccCCccccEEeec
Q 047598 591 FKRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLDIK 670 (1112)
Q Consensus 591 ~~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L~ 670 (1112)
.++|++|+|++|.++.+|..+ .+|+.|++++|.++.++.- .+.|++|++++| .+..+|. ++.+++|++|+++
T Consensus 57 ~~~L~~L~Ls~N~l~~lp~~~---~~L~~L~l~~n~l~~l~~l---p~~L~~L~L~~n-~l~~lp~-~~~l~~L~~L~l~ 128 (353)
T d1jl5a_ 57 PPHLESLVASCNSLTELPELP---QSLKSLLVDNNNLKALSDL---PPLLEYLGVSNN-QLEKLPE-LQNSSFLKIIDVD 128 (353)
T ss_dssp CTTCSEEECCSSCCSSCCCCC---TTCCEEECCSSCCSCCCSC---CTTCCEEECCSS-CCSSCCC-CTTCTTCCEEECC
T ss_pred CCCCCEEECCCCCCcccccch---hhhhhhhhhhcccchhhhh---cccccccccccc-ccccccc-hhhhccceeeccc
Confidence 367999999999999998764 5789999999998877642 246999999998 7888886 7889999999999
Q ss_pred CCCccccCCCCCCCCC
Q 047598 671 GANLLREMPLGMKELK 686 (1112)
Q Consensus 671 ~~~~l~~lp~~i~~l~ 686 (1112)
++. ....|..+..+.
T Consensus 129 ~~~-~~~~~~~~~~l~ 143 (353)
T d1jl5a_ 129 NNS-LKKLPDLPPSLE 143 (353)
T ss_dssp SSC-CSCCCCCCTTCC
T ss_pred ccc-cccccccccccc
Confidence 988 555555444333
No 11
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=4e-14 Score=149.00 Aligned_cols=173 Identities=19% Similarity=0.157 Sum_probs=127.5
Q ss_pred CcccEEEeccccccccc-ccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccccCCccccEEeec
Q 047598 592 KRLRVLSLQRYYIGELL-VSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLDIK 670 (1112)
Q Consensus 592 ~~L~~L~L~~~~~~~lp-~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L~ 670 (1112)
++|++|+|++|.++.+| ..|.++++|++|+|++|.|+.+|. ++.+++|++|+|++| .+...|..+..+++|++|+++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~-~~~l~~L~~L~Ls~N-~l~~~~~~~~~l~~L~~L~l~ 108 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSHN-QLQSLPLLGQTLPALTVLDVS 108 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECCSS-CCSSCCCCTTTCTTCCEEECC
T ss_pred cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccc-ccccccccccccccc-ccccccccccccccccccccc
Confidence 57999999999999987 568999999999999999999874 688999999999998 788888889999999999999
Q ss_pred CCCccccCCCCCCCCCCCCccCeeeeccCCcccCccccccccccCCeeEEecccCCCChhhhhhccccCccccCceEEEe
Q 047598 671 GANLLREMPLGMKELKNLRTLSNFIVGKGEAISGLEDLKNLKFLGGELCISGLENVNDSQKVREATLCEKENLKTLSLEW 750 (1112)
Q Consensus 671 ~~~~l~~lp~~i~~l~~L~~L~~~~~~~~~~~~~l~~l~~L~~L~~~l~i~~l~~~~~~~~~~~~~l~~~~~L~~L~l~~ 750 (1112)
+|......+..+..+.+++.|.+..+.....+. ..+..+++
T Consensus 109 ~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~-------------------------------~~~~~l~~-------- 149 (266)
T d1p9ag_ 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPP-------------------------------GLLTPTPK-------- 149 (266)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCT-------------------------------TTTTTCTT--------
T ss_pred ccccceeeccccccccccccccccccccceecc-------------------------------cccccccc--------
Confidence 998444334446777888777665543322210 11122233
Q ss_pred CCCCCCCchhhhhhHHHhhccCCCCCCCCceEEEeccCCCCCCCc-cCCCCCCceeEEEEcCcCCCCCCC-CCCCCCCcc
Q 047598 751 GSQFDNSQDEVMEEYAVGVLDKLQPHKCIKNLTIKQYNGARFPSW-LGDPLFSKMEVLKLENCWNCTSLP-SLGLLSSLR 828 (1112)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~~~p~~-~~~~~l~~L~~L~L~~~~~~~~l~-~l~~l~~L~ 828 (1112)
++.|.+.++....+|.. +.. +++|++|+|++|.+. .+| .+..+++|+
T Consensus 150 ----------------------------l~~l~l~~N~l~~~~~~~~~~--l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~ 198 (266)
T d1p9ag_ 150 ----------------------------LEKLSLANNNLTELPAGLLNG--LENLDTLLLQENSLY-TIPKGFFGSHLLP 198 (266)
T ss_dssp ----------------------------CCEEECTTSCCSCCCTTTTTT--CTTCCEEECCSSCCC-CCCTTTTTTCCCS
T ss_pred ----------------------------chhcccccccccccCcccccc--ccccceeecccCCCc-ccChhHCCCCCCC
Confidence 44444455544555433 333 788888888888766 454 677788888
Q ss_pred eEEecCCC
Q 047598 829 ELTIQGLT 836 (1112)
Q Consensus 829 ~L~L~~~~ 836 (1112)
.|+|++|+
T Consensus 199 ~L~L~~Np 206 (266)
T d1p9ag_ 199 FAFLHGNP 206 (266)
T ss_dssp EEECCSCC
T ss_pred EEEecCCC
Confidence 88888875
No 12
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=2.5e-13 Score=144.55 Aligned_cols=217 Identities=18% Similarity=0.134 Sum_probs=111.5
Q ss_pred EecccccccccccccCCCcCcEEEccccccccccc-cccCCCCCcEEeecCCCCCcccCc-cccCCccccEEeecCCCcc
Q 047598 598 SLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPE-STNSLLNLEILILRNCSRLKKLPS-KMRNLINLHHLDIKGANLL 675 (1112)
Q Consensus 598 ~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~-~i~~L~~L~~L~L~~~~~l~~lp~-~i~~L~~L~~L~L~~~~~l 675 (1112)
+.+++.++++|..+. ..+++|+|++|.|+.+|. +|.++++|++|++++| .+..++. .+..+..++++....+..+
T Consensus 17 ~c~~~~L~~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n-~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 17 SCPQQGLQAVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSN-VLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp ECCSSCCSSCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSS-CCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred EcCCCCCCccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccc-ccccccccccccccccccccccccccc
Confidence 455555666665543 356667777766666664 4666666777777665 3443333 3445566666655444334
Q ss_pred ccCC-CCCCCCCCCCccCeeeeccCCcccCccccccccccCCeeEEecccCCCChhhhhhccccCccccCceEEEeCCCC
Q 047598 676 REMP-LGMKELKNLRTLSNFIVGKGEAISGLEDLKNLKFLGGELCISGLENVNDSQKVREATLCEKENLKTLSLEWGSQF 754 (1112)
Q Consensus 676 ~~lp-~~i~~l~~L~~L~~~~~~~~~~~~~l~~l~~L~~L~~~l~i~~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~ 754 (1112)
..++ ..+.++++|++|++..+.....+ ...+..
T Consensus 94 ~~l~~~~~~~l~~L~~L~l~~n~~~~~~-------------------------------~~~~~~--------------- 127 (284)
T d1ozna_ 94 RSVDPATFHGLGRLHTLHLDRCGLQELG-------------------------------PGLFRG--------------- 127 (284)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCC-------------------------------TTTTTT---------------
T ss_pred ccccchhhcccccCCEEecCCccccccc-------------------------------ccccch---------------
Confidence 4443 23555555555544332211110 000111
Q ss_pred CCCchhhhhhHHHhhccCCCCCCCCceEEEeccCCCCCCC-ccCCCCCCceeEEEEcCcCCCCCCC-CCCCCCCcceEEe
Q 047598 755 DNSQDEVMEEYAVGVLDKLQPHKCIKNLTIKQYNGARFPS-WLGDPLFSKMEVLKLENCWNCTSLP-SLGLLSSLRELTI 832 (1112)
Q Consensus 755 ~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~~~p~-~~~~~~l~~L~~L~L~~~~~~~~l~-~l~~l~~L~~L~L 832 (1112)
...|+.+.+.++....+|. .+.. +++|+.|++++|.+....+ .+..+++|+.+++
T Consensus 128 ---------------------~~~L~~l~l~~N~l~~i~~~~f~~--~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l 184 (284)
T d1ozna_ 128 ---------------------LAALQYLYLQDNALQALPDDTFRD--LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184 (284)
T ss_dssp ---------------------CTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred ---------------------hcccchhhhccccccccChhHhcc--ccchhhcccccCcccccchhhhccccccchhhh
Confidence 1223333333333333432 2222 5667777777766543333 4666777777777
Q ss_pred cCCCCceecCccccCCCCcccCcccceeecCCCCcccccccccCCCCcCCcccCCCccceEeEecCCCCC
Q 047598 833 QGLTKLKSIGSEVYGKGFSKPFQSLEILSFENLPEWEYWDTNIKGNDHADRVEIFPRLHKLSIMECPKLS 902 (1112)
Q Consensus 833 ~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~p~L~~L~l~~c~~L~ 902 (1112)
++|......+..+.. +++|+.|++++ +......+..+..+++|++|++++ |.+.
T Consensus 185 ~~N~l~~i~~~~f~~------l~~L~~L~l~~---------N~i~~~~~~~~~~~~~L~~L~l~~-N~l~ 238 (284)
T d1ozna_ 185 HQNRVAHVHPHAFRD------LGRLMTLYLFA---------NNLSALPTEALAPLRALQYLRLND-NPWV 238 (284)
T ss_dssp CSSCCCEECTTTTTT------CTTCCEEECCS---------SCCSCCCHHHHTTCTTCCEEECCS-SCEE
T ss_pred hhccccccChhHhhh------hhhcccccccc---------cccccccccccccccccCEEEecC-CCCC
Confidence 766544433333333 66667776665 223333334455677777777777 5554
No 13
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.6e-12 Score=138.25 Aligned_cols=217 Identities=20% Similarity=0.225 Sum_probs=140.9
Q ss_pred eccCCCCCCCccCCCCCCceeEEEEcCcCCCCCCC-CCCCCCCcceEEecCCCCceecCccccCCCCcccCcccceeecC
Q 047598 785 KQYNGARFPSWLGDPLFSKMEVLKLENCWNCTSLP-SLGLLSSLRELTIQGLTKLKSIGSEVYGKGFSKPFQSLEILSFE 863 (1112)
Q Consensus 785 ~~~~~~~~p~~~~~~~l~~L~~L~L~~~~~~~~l~-~l~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~ 863 (1112)
++.....+|..+ .+++++|+|++|.+....+ .+.++++|++|+++++. +..++...... ++.++.+.+.
T Consensus 19 ~~~~L~~iP~~i----p~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~-l~~i~~~~~~~-----~~~~~~l~~~ 88 (284)
T d1ozna_ 19 PQQGLQAVPVGI----PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV-LARIDAAAFTG-----LALLEQLDLS 88 (284)
T ss_dssp CSSCCSSCCTTC----CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSC-CCEECTTTTTT-----CTTCCEEECC
T ss_pred CCCCCCccCCCC----CCCCCEEECcCCcCCCCCHHHhhcccccccccccccc-ccccccccccc-----cccccccccc
Confidence 344455666644 4578888888887754433 58888889999988764 44444433332 5667777666
Q ss_pred CCCcccccccccCCCCcCCcccCCCccceEeEecCCCCCCCCCCCCCCcceeEEeEEEEeccCCcccCc-ccCCCCCCcC
Q 047598 864 NLPEWEYWDTNIKGNDHADRVEIFPRLHKLSIMECPKLSGKLPELLPSLETLVVATFVIANCEKLEALP-NDMHRLNFLE 942 (1112)
Q Consensus 864 ~~~~l~~~~~~~~~~~~~~~~~~~p~L~~L~l~~c~~L~~~~p~~~~~L~~L~~~~L~~~~~~~l~~lp-~~l~~l~~L~ 942 (1112)
....+.. ..+..+..+++|++|++++ +.+....+..+.....|...+ +++ ..++.+| ..+..+++|+
T Consensus 89 ~~~~~~~--------l~~~~~~~l~~L~~L~l~~-n~~~~~~~~~~~~~~~L~~l~--l~~-N~l~~i~~~~f~~~~~L~ 156 (284)
T d1ozna_ 89 DNAQLRS--------VDPATFHGLGRLHTLHLDR-CGLQELGPGLFRGLAALQYLY--LQD-NALQALPDDTFRDLGNLT 156 (284)
T ss_dssp SCTTCCC--------CCTTTTTTCTTCCEEECTT-SCCCCCCTTTTTTCTTCCEEE--CCS-SCCCCCCTTTTTTCTTCC
T ss_pred ccccccc--------ccchhhcccccCCEEecCC-cccccccccccchhcccchhh--hcc-ccccccChhHhccccchh
Confidence 5433332 2334456788888888888 456544444555555554333 332 2344554 4567788899
Q ss_pred EEEEecCCCCcccCCC--CCCCCCCeEEEcCCcccccccccccCCCCCCcCEEEEcccCCccccccCcccccccCCCCcc
Q 047598 943 HLRIGQCPSILSFPEE--GFPTNLASLVIGGDVKMYKGLIQWGLHRLTALRRLEIDGCHDDEVECFPNEEMGVMLPSSLT 1020 (1112)
Q Consensus 943 ~L~L~~~~~l~~~~~~--~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~l~~l~~~~~~~~~~~sL~ 1020 (1112)
.|++++|. +..++.. ..+++|+.+++++| ......+..|..+++|++|++++|. +..++...|
T Consensus 157 ~L~l~~N~-l~~l~~~~f~~l~~L~~l~l~~N--~l~~i~~~~f~~l~~L~~L~l~~N~---i~~~~~~~~--------- 221 (284)
T d1ozna_ 157 HLFLHGNR-ISSVPERAFRGLHSLDRLLLHQN--RVAHVHPHAFRDLGRLMTLYLFANN---LSALPTEAL--------- 221 (284)
T ss_dssp EEECCSSC-CCEECTTTTTTCTTCCEEECCSS--CCCEECTTTTTTCTTCCEEECCSSC---CSCCCHHHH---------
T ss_pred hcccccCc-ccccchhhhccccccchhhhhhc--cccccChhHhhhhhhcccccccccc---ccccccccc---------
Confidence 99999884 5555544 34788999999888 4545667788889999999999876 444444332
Q ss_pred EEEecCCCCCCcCCCCCCCCeEEeecCCCCC
Q 047598 1021 HLTIAGFKKLKKLSLMTSLEYLWIKNCPNLA 1051 (1112)
Q Consensus 1021 ~L~l~~~~~L~~l~~l~~L~~L~ls~c~~l~ 1051 (1112)
..+++|++|++++|+...
T Consensus 222 -------------~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 222 -------------APLRALQYLRLNDNPWVC 239 (284)
T ss_dssp -------------TTCTTCCEEECCSSCEEC
T ss_pred -------------ccccccCEEEecCCCCCC
Confidence 246788889998886543
No 14
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.40 E-value=3e-13 Score=138.52 Aligned_cols=81 Identities=21% Similarity=0.257 Sum_probs=60.5
Q ss_pred ccCCcccEEEecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccccCCccccEEe
Q 047598 589 PKFKRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLD 668 (1112)
Q Consensus 589 ~~~~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~ 668 (1112)
..+.+|+.|++.+|.+..+ +.+..+++|++|++++|.+..+++ +.++++|++|++++| .++.++. +..+++|++++
T Consensus 38 ~~l~~L~~L~l~~~~i~~l-~~l~~l~~L~~L~ls~n~i~~~~~-l~~l~~l~~l~~~~n-~~~~i~~-l~~l~~L~~l~ 113 (227)
T d1h6ua2 38 ADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGN-PLKNVSA-IAGLQSIKTLD 113 (227)
T ss_dssp HHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSC-CCSCCGG-GTTCTTCCEEE
T ss_pred HHcCCcCEEECCCCCCCcc-hhHhcCCCCcEeecCCceeecccc-ccccccccccccccc-ccccccc-ccccccccccc
Confidence 4567788888888888777 457788888888888888777653 777888888888876 5566553 77778888888
Q ss_pred ecCCC
Q 047598 669 IKGAN 673 (1112)
Q Consensus 669 L~~~~ 673 (1112)
++++.
T Consensus 114 l~~~~ 118 (227)
T d1h6ua2 114 LTSTQ 118 (227)
T ss_dssp CTTSC
T ss_pred ccccc
Confidence 87765
No 15
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=3.2e-12 Score=132.41 Aligned_cols=101 Identities=23% Similarity=0.241 Sum_probs=56.3
Q ss_pred cEEEecccccccccccccCCCcCcEEEccccccccccc-cccCCCCCcEEeecCCCCCcccCc-cccCCccccEEeecCC
Q 047598 595 RVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPE-STNSLLNLEILILRNCSRLKKLPS-KMRNLINLHHLDIKGA 672 (1112)
Q Consensus 595 ~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~-~i~~L~~L~~L~L~~~~~l~~lp~-~i~~L~~L~~L~L~~~ 672 (1112)
++++.++..++.+|..+. .++++|+|++|.|+.+|. .|.++++|++|++++|.....+|. .|..++++++|.+..+
T Consensus 11 ~~i~c~~~~l~~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp SEEEEESCSCSSCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred CEEEEeCCCCCCcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccc
Confidence 455666666666665443 356666666666666655 356666666666666643343332 3556666666665543
Q ss_pred CccccCC-CCCCCCCCCCccCeeeec
Q 047598 673 NLLREMP-LGMKELKNLRTLSNFIVG 697 (1112)
Q Consensus 673 ~~l~~lp-~~i~~l~~L~~L~~~~~~ 697 (1112)
+.+..++ ..+..+++|++|++..+.
T Consensus 89 n~l~~~~~~~~~~l~~L~~l~l~~~~ 114 (242)
T d1xwdc1 89 NNLLYINPEAFQNLPNLQYLLISNTG 114 (242)
T ss_dssp TTCCEECTTSEECCTTCCEEEEESCC
T ss_pred ccccccccccccccccccccccchhh
Confidence 3233333 335556666666555443
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.37 E-value=1.4e-13 Score=141.07 Aligned_cols=98 Identities=20% Similarity=0.303 Sum_probs=74.9
Q ss_pred CcccEEEecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccccCCccccEEeecC
Q 047598 592 KRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLDIKG 671 (1112)
Q Consensus 592 ~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L~~ 671 (1112)
.++..++++.+.+..+ ..+..+.+|++|++.+|.|+.++ .+..+++|++|++++| .+..++. +.++++|+++++++
T Consensus 19 ~~~~~~~l~~~~~~d~-~~~~~l~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~ls~n-~i~~~~~-l~~l~~l~~l~~~~ 94 (227)
T d1h6ua2 19 ANAIKIAAGKSNVTDT-VTQADLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDN-QITDLAP-LKNLTKITELELSG 94 (227)
T ss_dssp HHHHHHHTTCSSTTSE-ECHHHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSS-CCCCCGG-GTTCCSCCEEECCS
T ss_pred HHHHHHHhCCCCcCCc-CCHHHcCCcCEEECCCCCCCcch-hHhcCCCCcEeecCCc-eeecccc-cccccccccccccc
Confidence 3444455666666554 24577889999999999999984 6999999999999998 6666654 89999999999999
Q ss_pred CCccccCCCCCCCCCCCCccCeee
Q 047598 672 ANLLREMPLGMKELKNLRTLSNFI 695 (1112)
Q Consensus 672 ~~~l~~lp~~i~~l~~L~~L~~~~ 695 (1112)
|. .+.++ .+..+++|+.+.+..
T Consensus 95 n~-~~~i~-~l~~l~~L~~l~l~~ 116 (227)
T d1h6ua2 95 NP-LKNVS-AIAGLQSIKTLDLTS 116 (227)
T ss_dssp CC-CSCCG-GGTTCTTCCEEECTT
T ss_pred cc-ccccc-ccccccccccccccc
Confidence 87 45554 467777777776544
No 17
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.36 E-value=6.5e-13 Score=133.71 Aligned_cols=98 Identities=19% Similarity=0.303 Sum_probs=71.1
Q ss_pred cCCcccEEEecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccccCCccccEEee
Q 047598 590 KFKRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLDI 669 (1112)
Q Consensus 590 ~~~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L 669 (1112)
.+.+|+.|++++|.+..++ .+..+++|++|+|++|.++.++ .++.+++|++|++++| .+..+|. +..+++|+.|++
T Consensus 44 ~L~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~L~~n~i~~l~-~~~~l~~L~~L~l~~n-~i~~l~~-l~~l~~L~~L~l 119 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIK-PLANLKNLGWLFLDEN-KVKDLSS-LKDLKKLKSLSL 119 (210)
T ss_dssp HHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSS-CCCCGGG-GTTCTTCCEEEC
T ss_pred HhcCccEEECcCCCCCCch-hHhhCCCCCEEeCCCccccCcc-ccccCccccccccccc-ccccccc-cccccccccccc
Confidence 3567888888888887765 4778888888888888888776 4678888888888887 6777774 778888888888
Q ss_pred cCCCccccCCCCCCCCCCCCccCe
Q 047598 670 KGANLLREMPLGMKELKNLRTLSN 693 (1112)
Q Consensus 670 ~~~~~l~~lp~~i~~l~~L~~L~~ 693 (1112)
++|. ...++ .+..+++|+.++.
T Consensus 120 ~~~~-~~~~~-~l~~l~~l~~l~~ 141 (210)
T d1h6ta2 120 EHNG-ISDIN-GLVHLPQLESLYL 141 (210)
T ss_dssp TTSC-CCCCG-GGGGCTTCCEEEC
T ss_pred cccc-ccccc-ccccccccccccc
Confidence 8876 33332 3444555544443
No 18
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.33 E-value=2e-12 Score=128.84 Aligned_cols=80 Identities=19% Similarity=0.312 Sum_probs=53.2
Q ss_pred cCCcccEEEecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccccCCccccEEee
Q 047598 590 KFKRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLDI 669 (1112)
Q Consensus 590 ~~~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L 669 (1112)
.+.+++.|++++|.+..+. .+..+++|++|++++|.++.++. ++++++|++|++++| .+..+|. +..+++|++|++
T Consensus 38 ~l~~l~~L~l~~~~i~~l~-~l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n-~~~~~~~-l~~l~~L~~L~l 113 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNN-QIADITP-LANLTNLTGLTL 113 (199)
T ss_dssp HHTTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSS-CCCCCGG-GTTCTTCSEEEC
T ss_pred HhcCCCEEECCCCCCCCcc-ccccCCCcCcCccccccccCccc-ccCCccccccccccc-ccccccc-cccccccccccc
Confidence 3456677777777766653 46667777777777777766654 667777777777776 4555553 666777777777
Q ss_pred cCCC
Q 047598 670 KGAN 673 (1112)
Q Consensus 670 ~~~~ 673 (1112)
++|.
T Consensus 114 ~~~~ 117 (199)
T d2omxa2 114 FNNQ 117 (199)
T ss_dssp CSSC
T ss_pred cccc
Confidence 6665
No 19
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.28 E-value=2.1e-12 Score=116.74 Aligned_cols=101 Identities=25% Similarity=0.263 Sum_probs=81.4
Q ss_pred cEEEecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccccCCccccEEeecCCCc
Q 047598 595 RVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLDIKGANL 674 (1112)
Q Consensus 595 ~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L~~~~~ 674 (1112)
|+|+|++|.++.++ .+..+++|++|++++|.++.+|+.++.+++|++|++++| .+..+|. +..+++|++|++++|.
T Consensus 1 R~L~Ls~n~l~~l~-~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N-~i~~l~~-~~~l~~L~~L~l~~N~- 76 (124)
T d1dcea3 1 RVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDN-ALENVDG-VANLPRLQELLLCNNR- 76 (124)
T ss_dssp SEEECTTSCCSSCC-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSS-CCCCCGG-GTTCSSCCEEECCSSC-
T ss_pred CEEEcCCCCCCCCc-ccccCCCCCEEECCCCccCcchhhhhhhhcccccccccc-cccccCc-cccccccCeEECCCCc-
Confidence 67888888888776 478888899999998888888888888889999999887 6777764 8888889999998887
Q ss_pred cccCCC--CCCCCCCCCccCeeeeccC
Q 047598 675 LREMPL--GMKELKNLRTLSNFIVGKG 699 (1112)
Q Consensus 675 l~~lp~--~i~~l~~L~~L~~~~~~~~ 699 (1112)
+..+|. .++.+++|++|++.+|...
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 555553 4677888888887776543
No 20
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.27 E-value=5.4e-12 Score=126.84 Aligned_cols=94 Identities=21% Similarity=0.351 Sum_probs=72.3
Q ss_pred EecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccccCCccccEEeecCCCcccc
Q 047598 598 SLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLDIKGANLLRE 677 (1112)
Q Consensus 598 ~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L~~~~~l~~ 677 (1112)
.+..+.+..... ...+.+|++|++++|.++.++ .+..+++|++|++++| .+..++. ++.+++|++|++++|. +..
T Consensus 30 ~l~~~~~~~~~~-~~~L~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~L~~n-~i~~l~~-~~~l~~L~~L~l~~n~-i~~ 104 (210)
T d1h6ta2 30 NLKKKSVTDAVT-QNELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGN-KLTDIKP-LANLKNLGWLFLDENK-VKD 104 (210)
T ss_dssp HTTCSCTTSEEC-HHHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSS-CCCCCGG-GTTCTTCCEEECCSSC-CCC
T ss_pred HhCcCccCCccC-HHHhcCccEEECcCCCCCCch-hHhhCCCCCEEeCCCc-cccCccc-cccCcccccccccccc-ccc
Confidence 344444433221 235678999999999999886 5889999999999998 7787775 7899999999999998 666
Q ss_pred CCCCCCCCCCCCccCeeeec
Q 047598 678 MPLGMKELKNLRTLSNFIVG 697 (1112)
Q Consensus 678 lp~~i~~l~~L~~L~~~~~~ 697 (1112)
+| .+..+++|+.|++..+.
T Consensus 105 l~-~l~~l~~L~~L~l~~~~ 123 (210)
T d1h6ta2 105 LS-SLKDLKKLKSLSLEHNG 123 (210)
T ss_dssp GG-GGTTCTTCCEEECTTSC
T ss_pred cc-ccccccccccccccccc
Confidence 66 47778888888765543
No 21
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.25 E-value=1e-11 Score=123.66 Aligned_cols=94 Identities=20% Similarity=0.296 Sum_probs=71.4
Q ss_pred EEecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccccCCccccEEeecCCCccc
Q 047598 597 LSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHHLDIKGANLLR 676 (1112)
Q Consensus 597 L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~L~L~~~~~l~ 676 (1112)
+.++.+.++..+ ....+.+|++|++++|.+..++ .++.+++|++|++++| .+..++. ++.+++|++|++++|. ..
T Consensus 23 ~~l~~~~~~~~~-~~~~l~~l~~L~l~~~~i~~l~-~l~~l~nL~~L~Ls~N-~l~~~~~-l~~l~~L~~L~l~~n~-~~ 97 (199)
T d2omxa2 23 TVLGKTNVTDTV-SQTDLDQVTTLQADRLGIKSID-GVEYLNNLTQINFSNN-QLTDITP-LKNLTKLVDILMNNNQ-IA 97 (199)
T ss_dssp HHTTCSSTTSEE-CHHHHTTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSS-CCCCCGG-GTTCTTCCEEECCSSC-CC
T ss_pred HHhCCCCCCCcc-CHHHhcCCCEEECCCCCCCCcc-ccccCCCcCcCccccc-cccCccc-ccCCcccccccccccc-cc
Confidence 345555555443 2346789999999999999884 6899999999999998 6777775 8999999999999987 45
Q ss_pred cCCCCCCCCCCCCccCeeee
Q 047598 677 EMPLGMKELKNLRTLSNFIV 696 (1112)
Q Consensus 677 ~lp~~i~~l~~L~~L~~~~~ 696 (1112)
.+| .++.+++|+.|++..+
T Consensus 98 ~~~-~l~~l~~L~~L~l~~~ 116 (199)
T d2omxa2 98 DIT-PLANLTNLTGLTLFNN 116 (199)
T ss_dssp CCG-GGTTCTTCSEEECCSS
T ss_pred ccc-cccccccccccccccc
Confidence 554 3667777777665443
No 22
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=5.6e-12 Score=120.04 Aligned_cols=110 Identities=23% Similarity=0.236 Sum_probs=79.0
Q ss_pred cccCCcccEEEecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccc-cCCccccE
Q 047598 588 LPKFKRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKM-RNLINLHH 666 (1112)
Q Consensus 588 ~~~~~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i-~~L~~L~~ 666 (1112)
|.++..||.|+|++|.|+.++..+..+.+|++|+|++|.|..++ .+..+++|++|++++| .+..+|..+ ..+++|++
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N-~i~~l~~~~~~~l~~L~~ 91 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNN-RICRIGEGLDQALPDLTE 91 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSS-CCCEECSCHHHHCTTCCE
T ss_pred ccCcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccC-CcccCcchhhhhcccc-cccCCCcccccccccccc
Confidence 44556778888888888877766677788888888888888774 5777888888888887 566666543 46788888
Q ss_pred EeecCCCccccCCC--CCCCCCCCCccCeeeeccCC
Q 047598 667 LDIKGANLLREMPL--GMKELKNLRTLSNFIVGKGE 700 (1112)
Q Consensus 667 L~L~~~~~l~~lp~--~i~~l~~L~~L~~~~~~~~~ 700 (1112)
|++++|. +..++. .+..+++|++|++.+|....
T Consensus 92 L~L~~N~-i~~~~~l~~l~~l~~L~~L~l~~N~i~~ 126 (162)
T d1a9na_ 92 LILTNNS-LVELGDLDPLASLKSLTYLCILRNPVTN 126 (162)
T ss_dssp EECCSCC-CCCGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred ceecccc-ccccccccccccccccchhhcCCCcccc
Confidence 8888877 454443 36677777777777665433
No 23
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=3.3e-10 Score=116.87 Aligned_cols=204 Identities=15% Similarity=0.141 Sum_probs=129.9
Q ss_pred ceEEEeccCCCCCCCccCCCCCCceeEEEEcCcCCCCCCC-CCCCCCCcceEEecCCCCceecCccccCCCCcccCcccc
Q 047598 780 KNLTIKQYNGARFPSWLGDPLFSKMEVLKLENCWNCTSLP-SLGLLSSLRELTIQGLTKLKSIGSEVYGKGFSKPFQSLE 858 (1112)
Q Consensus 780 ~~L~l~~~~~~~~p~~~~~~~l~~L~~L~L~~~~~~~~l~-~l~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~ 858 (1112)
+.+...+.....+|..+ ++++++|+|++|.+....+ .+.++++|++|++++|.....++...+.. ++.++
T Consensus 11 ~~i~c~~~~l~~iP~~l----~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~-----l~~l~ 81 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDL----PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSN-----LPKLH 81 (242)
T ss_dssp SEEEEESCSCSSCCSCS----CSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEES-----CTTCC
T ss_pred CEEEEeCCCCCCcCCCC----CCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccc-----ccccc
Confidence 34555666666777654 4689999999988654333 57889999999999987776665543332 77888
Q ss_pred eeecCCCCcccccccccCCCCcCCcccCCCccceEeEecCCCCCCCCC-CCCCCcceeEEeEEEEeccCCcccCc-ccCC
Q 047598 859 ILSFENLPEWEYWDTNIKGNDHADRVEIFPRLHKLSIMECPKLSGKLP-ELLPSLETLVVATFVIANCEKLEALP-NDMH 936 (1112)
Q Consensus 859 ~L~l~~~~~l~~~~~~~~~~~~~~~~~~~p~L~~L~l~~c~~L~~~~p-~~~~~L~~L~~~~L~~~~~~~l~~lp-~~l~ 936 (1112)
.+.+..+..+..+. +..+..+++|+.|++.+ ++++...+ ..+.+++.+.. ....+..+..++ ..+.
T Consensus 82 ~l~~~~~n~l~~~~--------~~~~~~l~~L~~l~l~~-~~l~~~~~~~~~~~l~~l~~---~~~~n~~l~~i~~~~~~ 149 (242)
T d1xwdc1 82 EIRIEKANNLLYIN--------PEAFQNLPNLQYLLISN-TGIKHLPDVHKIHSLQKVLL---DIQDNINIHTIERNSFV 149 (242)
T ss_dssp EEEEECCTTCCEEC--------TTSEECCTTCCEEEEES-CCCCSCCCCTTTCBSSCEEE---EEESCTTCCEECTTSST
T ss_pred cccccccccccccc--------cccccccccccccccch-hhhccccccccccccccccc---ccccccccccccccccc
Confidence 88877654443332 23456789999999999 57763222 23445566543 233444444443 2334
Q ss_pred CC-CCcCEEEEecCCCCcccCCC-CCCCCCCeEEEcCCcccccccccccCCCCCCcCEEEEcccCCccccccCcc
Q 047598 937 RL-NFLEHLRIGQCPSILSFPEE-GFPTNLASLVIGGDVKMYKGLIQWGLHRLTALRRLEIDGCHDDEVECFPNE 1009 (1112)
Q Consensus 937 ~l-~~L~~L~L~~~~~l~~~~~~-~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~l~~l~~~ 1009 (1112)
.+ ..++.|++++|. +..++.. ...+++..+....+. ......+..|.++++|+.|+|++|+ ++.+|..
T Consensus 150 ~~~~~l~~L~l~~n~-l~~i~~~~~~~~~l~~~~~l~~n-~l~~l~~~~f~~l~~L~~L~Ls~N~---l~~l~~~ 219 (242)
T d1xwdc1 150 GLSFESVILWLNKNG-IQEIHNCAFNGTQLDELNLSDNN-NLEELPNDVFHGASGPVILDISRTR---IHSLPSY 219 (242)
T ss_dssp TSBSSCEEEECCSSC-CCEECTTTTTTCCEEEEECTTCT-TCCCCCTTTTTTSCCCSEEECTTSC---CCCCCSS
T ss_pred cccccceeeeccccc-ccccccccccchhhhcccccccc-ccccccHHHhcCCCCCCEEECCCCc---CCccCHH
Confidence 44 368888888874 4455544 334566666543332 3334445568889999999999986 6666653
No 24
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=2.1e-11 Score=116.00 Aligned_cols=130 Identities=19% Similarity=0.187 Sum_probs=104.6
Q ss_pred hhccCCCcceeccccccCCcccccccccccccccccCCcccEEEecccccccccccccCCCcCcEEEccccccccccccc
Q 047598 555 VFYQTENLRTFLPIRIRGGTICSYITGIVLSDLLPKFKRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPEST 634 (1112)
Q Consensus 555 ~~~~~~~lr~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i 634 (1112)
.+.+..++|.|.+.++.. . .+ ++.+..++.|++|+|++|.+..++ .|..+++|++|++++|.+..+|+.+
T Consensus 13 ~~~n~~~lr~L~L~~n~I-------~-~i-~~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~ 82 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKI-------P-VI-ENLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGL 82 (162)
T ss_dssp EEECTTSCEEEECTTSCC-------C-SC-CCGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCH
T ss_pred hccCcCcCcEEECCCCCC-------C-cc-CccccccccCCEEECCCCCCCccC-CcccCcchhhhhcccccccCCCccc
Confidence 345667888888877641 1 12 345677899999999999999884 6899999999999999999998764
Q ss_pred -cCCCCCcEEeecCCCCCcccCc--cccCCccccEEeecCCCccccCCC----CCCCCCCCCccCeeee
Q 047598 635 -NSLLNLEILILRNCSRLKKLPS--KMRNLINLHHLDIKGANLLREMPL----GMKELKNLRTLSNFIV 696 (1112)
Q Consensus 635 -~~L~~L~~L~L~~~~~l~~lp~--~i~~L~~L~~L~L~~~~~l~~lp~----~i~~l~~L~~L~~~~~ 696 (1112)
..+++|++|++++| .+..++. .+..+++|++|++++|. +...|. .+..+++|+.|+...+
T Consensus 83 ~~~l~~L~~L~L~~N-~i~~~~~l~~l~~l~~L~~L~l~~N~-i~~~~~~r~~~i~~lp~L~~LD~~~i 149 (162)
T d1a9na_ 83 DQALPDLTELILTNN-SLVELGDLDPLASLKSLTYLCILRNP-VTNKKHYRLYVIYKVPQVRVLDFQKV 149 (162)
T ss_dssp HHHCTTCCEEECCSC-CCCCGGGGGGGGGCTTCCEEECCSSG-GGGSTTHHHHHHHHCTTCSEETTEEC
T ss_pred cccccccccceeccc-cccccccccccccccccchhhcCCCc-cccccchHHHHHHHCCCcCeeCCCCC
Confidence 67999999999998 7777764 57889999999999998 566664 3677888888875543
No 25
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.13 E-value=4.6e-11 Score=107.67 Aligned_cols=89 Identities=21% Similarity=0.297 Sum_probs=79.6
Q ss_pred cccCCcccEEEecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCc--cccCCcccc
Q 047598 588 LPKFKRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPS--KMRNLINLH 665 (1112)
Q Consensus 588 ~~~~~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~--~i~~L~~L~ 665 (1112)
+..++.|+.|++++|.+..+|..++.+++|++|++++|.|+.+| .++++++|++|++++| .+..+|. .+..+++|+
T Consensus 16 l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N-~i~~~~~~~~l~~~~~L~ 93 (124)
T d1dcea3 16 LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNN-RLQQSAAIQPLVSCPRLV 93 (124)
T ss_dssp GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSS-CCCSSSTTGGGGGCTTCC
T ss_pred cccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccC-ccccccccCeEECCCC-ccCCCCCchhhcCCCCCC
Confidence 67889999999999999999999999999999999999999997 5999999999999998 7777763 588999999
Q ss_pred EEeecCCCccccCC
Q 047598 666 HLDIKGANLLREMP 679 (1112)
Q Consensus 666 ~L~L~~~~~l~~lp 679 (1112)
+|++++|. +...+
T Consensus 94 ~L~l~~N~-i~~~~ 106 (124)
T d1dcea3 94 LLNLQGNS-LCQEE 106 (124)
T ss_dssp EEECTTSG-GGGSS
T ss_pred EEECCCCc-CCcCc
Confidence 99999998 44443
No 26
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.13 E-value=6.8e-12 Score=132.70 Aligned_cols=60 Identities=13% Similarity=0.124 Sum_probs=39.5
Q ss_pred CCceeEEEEcCcCCCC--CCCCCCCCCCcceEEecCCCCceecCccccCCCCcccCcccceeecCCC
Q 047598 801 FSKMEVLKLENCWNCT--SLPSLGLLSSLRELTIQGLTKLKSIGSEVYGKGFSKPFQSLEILSFENL 865 (1112)
Q Consensus 801 l~~L~~L~L~~~~~~~--~l~~l~~l~~L~~L~L~~~~~l~~i~~~~~~~~~~~~~~~L~~L~l~~~ 865 (1112)
+++|++|++++|...+ .+..++++++|++|+|++|..+...+....+ .+|+|+.|+++++
T Consensus 174 ~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~-----~~~~L~~L~l~~~ 235 (284)
T d2astb2 174 CPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELG-----EIPTLKTLQVFGI 235 (284)
T ss_dssp CTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGG-----GCTTCCEEECTTS
T ss_pred cccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHh-----cCCCCCEEeeeCC
Confidence 5778888888776543 3446777888888888888766543322222 2677788777764
No 27
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=8.5e-12 Score=131.93 Aligned_cols=35 Identities=29% Similarity=0.328 Sum_probs=18.0
Q ss_pred CCceeEEEEcCcCCCCC-CC-CCCCCCCcceEEecCC
Q 047598 801 FSKMEVLKLENCWNCTS-LP-SLGLLSSLRELTIQGL 835 (1112)
Q Consensus 801 l~~L~~L~L~~~~~~~~-l~-~l~~l~~L~~L~L~~~ 835 (1112)
..+|++|+|++|.+... ++ .+..+++|++|++++|
T Consensus 45 ~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~ 81 (284)
T d2astb2 45 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGL 81 (284)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTC
T ss_pred CCCCCEEECCCCccCHHHHHHHHHhCCCccccccccc
Confidence 34566666666544321 11 2445556666666555
No 28
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.98 E-value=1.2e-09 Score=115.59 Aligned_cols=195 Identities=13% Similarity=0.168 Sum_probs=113.0
Q ss_pred CCcceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeC-----C
Q 047598 176 TERAVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCIS-----D 250 (1112)
Q Consensus 176 ~~~~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~-----~ 250 (1112)
....||||+++++++.+.. .+++.|+|++|+|||+|++++.++... ...|+.+. .
T Consensus 10 ~~~~f~GR~~el~~l~~~~------------~~~i~i~G~~G~GKTsLl~~~~~~~~~--------~~~~i~~~~~~~~~ 69 (283)
T d2fnaa2 10 NRKDFFDREKEIEKLKGLR------------APITLVLGLRRTGKSSIIKIGINELNL--------PYIYLDLRKFEERN 69 (283)
T ss_dssp SGGGSCCCHHHHHHHHHTC------------SSEEEEEESTTSSHHHHHHHHHHHHTC--------CEEEEEGGGGTTCS
T ss_pred ChhhCCChHHHHHHHHhcc------------CCEEEEEcCCCCcHHHHHHHHHHHCCC--------CeEEEEeccccccc
Confidence 3578999999999986531 247889999999999999999876431 12344432 1
Q ss_pred CCCHHHHHHHHHHHhc--------------CC---------------CCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCC
Q 047598 251 VFDVLSISKALLESIT--------------RK---------------PCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNE 301 (1112)
Q Consensus 251 ~~~~~~~~~~il~~l~--------------~~---------------~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~ 301 (1112)
......+...+..... .. .....+..+....+. ...++++++|+|++...
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~~~i~id~~~~~ 148 (283)
T d2fnaa2 70 YISYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFE-QASKDNVIIVLDEAQEL 148 (283)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHH-HTCSSCEEEEEETGGGG
T ss_pred cccHHHHHHHHHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHH-hhcccccccccchhhhh
Confidence 2223333333333221 00 011223333333332 34678999999987431
Q ss_pred ----ChhhHHHHHhcccCCCCCcEEEEEcCChhhhhhcC------------CCceeeCCCCChHhHHHHHHHhHhCCCCC
Q 047598 302 ----DYSLWVDLKAPLLAAAPNSKMIITTRHSHVASTMG------------PIKHYNLKRLLDEDCWSIFIKHAYESRSL 365 (1112)
Q Consensus 302 ----~~~~~~~l~~~l~~~~~gs~iivTTR~~~v~~~~~------------~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~ 365 (1112)
...-+..+.... ........+++++......... ....+.|.+++.+++.+++.+..-...-
T Consensus 149 ~~~~~~~~~~~l~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~~~~- 226 (283)
T d2fnaa2 149 VKLRGVNLLPALAYAY-DNLKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQEADI- 226 (283)
T ss_dssp GGCTTCCCHHHHHHHH-HHCTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHHHTC-
T ss_pred cccchHHHHHHHHHHH-HhhhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHHhhhhhcCC-
Confidence 111122222221 2223445555555443322110 2346889999999999999876533221
Q ss_pred CCchhHHHHHHHHHhhcCCchHHHHHHhhhhcC
Q 047598 366 KAHQISELFRKKVVGKCGGLPLAAKSLGGLLRT 398 (1112)
Q Consensus 366 ~~~~~~~~~~~~i~~~c~glPlai~~~~~~l~~ 398 (1112)
.. + ..++|++.++|.|..+..+|..+..
T Consensus 227 ~~-~----~~~~i~~~~~G~P~~L~~~~~~~~~ 254 (283)
T d2fnaa2 227 DF-K----DYEVVYEKIGGIPGWLTYFGFIYLD 254 (283)
T ss_dssp CC-C----CHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred CH-H----HHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 11 1 1468999999999999999876543
No 29
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.87 E-value=1.2e-11 Score=122.30 Aligned_cols=107 Identities=21% Similarity=0.250 Sum_probs=70.5
Q ss_pred ccccCCcccEEEecccccccccccccCCCcCcEEEccccccccccccccCCCCCcEEeecCCCCCcccCccccCCccccE
Q 047598 587 LLPKFKRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPESTNSLLNLEILILRNCSRLKKLPSKMRNLINLHH 666 (1112)
Q Consensus 587 ~~~~~~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L~~ 666 (1112)
.+..+++|+.|+|++|.|+.++ .+..+++|++|+|++|.|+.+|..+..+++|++|++++| .+..++. +..+++|++
T Consensus 43 sl~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N-~i~~l~~-~~~l~~L~~ 119 (198)
T d1m9la_ 43 TLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYN-QIASLSG-IEKLVNLRV 119 (198)
T ss_dssp HHHHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEE-ECCCHHH-HHHHHHSSE
T ss_pred HHhcccccceeECcccCCCCcc-cccCCccccChhhcccccccccccccccccccccccccc-ccccccc-ccccccccc
Confidence 3556677777777777776664 466777777777777777777655555666777777776 5665543 666777777
Q ss_pred EeecCCCccccCC--CCCCCCCCCCccCeeeec
Q 047598 667 LDIKGANLLREMP--LGMKELKNLRTLSNFIVG 697 (1112)
Q Consensus 667 L~L~~~~~l~~lp--~~i~~l~~L~~L~~~~~~ 697 (1112)
|++++|. +..++ ..++.+++|+.|++.+|.
T Consensus 120 L~L~~N~-i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 120 LYMSNNK-ITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp EEESEEE-CCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred cccccch-hccccccccccCCCccceeecCCCc
Confidence 7777776 34443 235667777777766654
No 30
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.86 E-value=2.6e-09 Score=105.11 Aligned_cols=106 Identities=17% Similarity=0.179 Sum_probs=84.4
Q ss_pred CcccEEEeccccccc-cc-ccccCCCcCcEEEcccccccccc-ccccCCCCCcEEeecCCCCCcccCc-cccCCccccEE
Q 047598 592 KRLRVLSLQRYYIGE-LL-VSFEDLKLLRYLNLADTMIRTLP-ESTNSLLNLEILILRNCSRLKKLPS-KMRNLINLHHL 667 (1112)
Q Consensus 592 ~~L~~L~L~~~~~~~-lp-~~~~~l~~Lr~L~Ls~n~i~~lp-~~i~~L~~L~~L~L~~~~~l~~lp~-~i~~L~~L~~L 667 (1112)
.++++|+|++|.|+. ++ ..|.++++|++|+|++|.+..++ ..+..+++|++|+|++| .+..+|. .|.++++|++|
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N-~l~~l~~~~F~~l~~L~~L 107 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN-KIKEISNKMFLGLHQLKTL 107 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC-CCCEECSSSSTTCTTCCEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc-cccccCHHHHhCCCccccc
Confidence 578889999999865 43 56788999999999999888664 46778999999999998 6777655 57889999999
Q ss_pred eecCCCccccCCCC-CCCCCCCCccCeeeeccC
Q 047598 668 DIKGANLLREMPLG-MKELKNLRTLSNFIVGKG 699 (1112)
Q Consensus 668 ~L~~~~~l~~lp~~-i~~l~~L~~L~~~~~~~~ 699 (1112)
+|++|. +..+|.+ +..+++|++|++.++...
T Consensus 108 ~L~~N~-l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 108 NLYDNQ-ISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp ECCSSC-CCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred ccCCcc-ccccCHHHhcCCcccccccccccccc
Confidence 999998 5666554 788899999888776543
No 31
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=5.4e-12 Score=144.89 Aligned_cols=93 Identities=22% Similarity=0.321 Sum_probs=62.7
Q ss_pred cccccccccccCCcccEEEecccccc-----cccccccCCCcCcEEEcccccccc-----cccccc-CCCCCcEEeecCC
Q 047598 580 TGIVLSDLLPKFKRLRVLSLQRYYIG-----ELLVSFEDLKLLRYLNLADTMIRT-----LPESTN-SLLNLEILILRNC 648 (1112)
Q Consensus 580 ~~~~~~~~~~~~~~L~~L~L~~~~~~-----~lp~~~~~l~~Lr~L~Ls~n~i~~-----lp~~i~-~L~~L~~L~L~~~ 648 (1112)
+...+...++.++++++|+|++|.++ .+...+..+++|++|+|++|.|+. +...+. ...+|++|+|++|
T Consensus 15 ~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 94 (460)
T d1z7xw1 15 SDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94 (460)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTS
T ss_pred ChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCC
Confidence 33334455677788888888888764 234556778888888888887752 333332 2347888888887
Q ss_pred CCCcc-----cCccccCCccccEEeecCCC
Q 047598 649 SRLKK-----LPSKMRNLINLHHLDIKGAN 673 (1112)
Q Consensus 649 ~~l~~-----lp~~i~~L~~L~~L~L~~~~ 673 (1112)
.++. ++..+..+++|++|++++|.
T Consensus 95 -~it~~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 95 -CLTGAGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp -CCBGGGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred -Cccccccccccchhhcccccccccccccc
Confidence 4543 45567778888888888876
No 32
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.83 E-value=3.3e-09 Score=104.34 Aligned_cols=88 Identities=19% Similarity=0.286 Sum_probs=41.9
Q ss_pred ccccccCCcccEEEeccccccccc-ccccCCCcCcEEEccccccccccc-cccCCCCCcEEeecCCCCCcccCc-cccCC
Q 047598 585 SDLLPKFKRLRVLSLQRYYIGELL-VSFEDLKLLRYLNLADTMIRTLPE-STNSLLNLEILILRNCSRLKKLPS-KMRNL 661 (1112)
Q Consensus 585 ~~~~~~~~~L~~L~L~~~~~~~lp-~~~~~l~~Lr~L~Ls~n~i~~lp~-~i~~L~~L~~L~L~~~~~l~~lp~-~i~~L 661 (1112)
...|..+++|+.|+|++|.+..++ ..+..+++|++|+|++|++..+|+ .|.++++|++|+|++| .+..+|. .|..+
T Consensus 47 ~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N-~l~~i~~~~f~~l 125 (192)
T d1w8aa_ 47 DGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN-QISCVMPGSFEHL 125 (192)
T ss_dssp SCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSS-CCCEECTTSSTTC
T ss_pred ccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccccCCc-cccccCHHHhcCC
Confidence 334444555555555555544433 344445555555555555554433 2444555555555554 3443332 24445
Q ss_pred ccccEEeecCCC
Q 047598 662 INLHHLDIKGAN 673 (1112)
Q Consensus 662 ~~L~~L~L~~~~ 673 (1112)
++|++|+|++|.
T Consensus 126 ~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 126 NSLTSLNLASNP 137 (192)
T ss_dssp TTCCEEECTTCC
T ss_pred cccccccccccc
Confidence 555555555544
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.76 E-value=1.5e-10 Score=114.12 Aligned_cols=128 Identities=23% Similarity=0.286 Sum_probs=99.8
Q ss_pred hhhccCCCcceeccccccCCcccccccccccccccccCCcccEEEecccccccccccccCCCcCcEEEcccccccccccc
Q 047598 554 EVFYQTENLRTFLPIRIRGGTICSYITGIVLSDLLPKFKRLRVLSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLPES 633 (1112)
Q Consensus 554 ~~~~~~~~lr~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp~~ 633 (1112)
..+..+++|+.|.+.++. +. .+ + .+..+++|++|+|++|.+..+|..+..+++|++|++++|.++.++ .
T Consensus 42 ~sl~~L~~L~~L~Ls~n~-------I~-~i-~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~l~-~ 110 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNN-------IE-KI-S-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS-G 110 (198)
T ss_dssp HHHHHTTTCCEEECSEEE-------ES-CC-C-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCCHH-H
T ss_pred hHHhcccccceeECcccC-------CC-Cc-c-cccCCccccChhhcccccccccccccccccccccccccccccccc-c
Confidence 467788999999987764 22 22 2 377899999999999999998866666778999999999999885 5
Q ss_pred ccCCCCCcEEeecCCCCCcccCc--cccCCccccEEeecCCCccccCCCC----------CCCCCCCCccCe
Q 047598 634 TNSLLNLEILILRNCSRLKKLPS--KMRNLINLHHLDIKGANLLREMPLG----------MKELKNLRTLSN 693 (1112)
Q Consensus 634 i~~L~~L~~L~L~~~~~l~~lp~--~i~~L~~L~~L~L~~~~~l~~lp~~----------i~~l~~L~~L~~ 693 (1112)
+..+++|++|++++| .+..++. .+..+++|++|++++|.+....+.. +..+++|+.|+.
T Consensus 111 ~~~l~~L~~L~L~~N-~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD~ 181 (198)
T d1m9la_ 111 IEKLVNLRVLYMSNN-KITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLDG 181 (198)
T ss_dssp HHHHHHSSEEEESEE-ECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEESS
T ss_pred ccccccccccccccc-hhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeCC
Confidence 889999999999998 7777763 5889999999999999843332221 345666666653
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.75 E-value=2.6e-11 Score=139.08 Aligned_cols=107 Identities=15% Similarity=0.133 Sum_probs=80.7
Q ss_pred CcccEEEecccccccc--cccccCCCcCcEEEccccccc-----cccccccCCCCCcEEeecCCCCCcc-----cCcccc
Q 047598 592 KRLRVLSLQRYYIGEL--LVSFEDLKLLRYLNLADTMIR-----TLPESTNSLLNLEILILRNCSRLKK-----LPSKMR 659 (1112)
Q Consensus 592 ~~L~~L~L~~~~~~~l--p~~~~~l~~Lr~L~Ls~n~i~-----~lp~~i~~L~~L~~L~L~~~~~l~~-----lp~~i~ 659 (1112)
.+|++||+++++++.. ..-+..+++|+.|+|++|.++ .++..+..+++|++|||++| .++. +...+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N-~i~~~~~~~l~~~l~ 80 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSN-ELGDVGVHCVLQGLQ 80 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTC-CCHHHHHHHHHHTTC
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCC-cCChHHHHHHHHHHh
Confidence 4689999999998653 344677899999999999876 45666788999999999998 5542 233333
Q ss_pred -CCccccEEeecCCCccc----cCCCCCCCCCCCCccCeeeeccC
Q 047598 660 -NLINLHHLDIKGANLLR----EMPLGMKELKNLRTLSNFIVGKG 699 (1112)
Q Consensus 660 -~L~~L~~L~L~~~~~l~----~lp~~i~~l~~L~~L~~~~~~~~ 699 (1112)
...+|++|++++|.+.. .++..+..+++|++|++.++...
T Consensus 81 ~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 81 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred cCCCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 23579999999998432 24455788999999998877643
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.63 E-value=3.3e-08 Score=92.67 Aligned_cols=85 Identities=22% Similarity=0.236 Sum_probs=46.6
Q ss_pred cccCCcccEEEeccc-cccccc-ccccCCCcCcEEEcccccccccc-ccccCCCCCcEEeecCCCCCcccCccccCCccc
Q 047598 588 LPKFKRLRVLSLQRY-YIGELL-VSFEDLKLLRYLNLADTMIRTLP-ESTNSLLNLEILILRNCSRLKKLPSKMRNLINL 664 (1112)
Q Consensus 588 ~~~~~~L~~L~L~~~-~~~~lp-~~~~~l~~Lr~L~Ls~n~i~~lp-~~i~~L~~L~~L~L~~~~~l~~lp~~i~~L~~L 664 (1112)
++.+++|+.|++++| .++.++ ..|.++++|+.|+|++|.|+.++ ..|..+++|++|+|++| .++.+|..+....+|
T Consensus 27 l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N-~l~~l~~~~~~~~~l 105 (156)
T d2ifga3 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN-ALESLSWKTVQGLSL 105 (156)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS-CCSCCCSTTTCSCCC
T ss_pred ccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCC-CCcccChhhhccccc
Confidence 444555566666544 355554 34555666666666666666553 33555666666666665 455555544444455
Q ss_pred cEEeecCCC
Q 047598 665 HHLDIKGAN 673 (1112)
Q Consensus 665 ~~L~L~~~~ 673 (1112)
++|+|++|.
T Consensus 106 ~~L~L~~Np 114 (156)
T d2ifga3 106 QELVLSGNP 114 (156)
T ss_dssp CEEECCSSC
T ss_pred cccccCCCc
Confidence 666665554
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.62 E-value=3.4e-08 Score=92.62 Aligned_cols=103 Identities=15% Similarity=0.033 Sum_probs=87.6
Q ss_pred ccEEEecccccccccccccCCCcCcEEEcccc-ccccccc-cccCCCCCcEEeecCCCCCcccC-ccccCCccccEEeec
Q 047598 594 LRVLSLQRYYIGELLVSFEDLKLLRYLNLADT-MIRTLPE-STNSLLNLEILILRNCSRLKKLP-SKMRNLINLHHLDIK 670 (1112)
Q Consensus 594 L~~L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n-~i~~lp~-~i~~L~~L~~L~L~~~~~l~~lp-~~i~~L~~L~~L~L~ 670 (1112)
...++.+++.+...|..+..+++|++|++++| .++.++. .|.++++|+.|+|++| .+..++ ..|..+++|++|+|+
T Consensus 10 ~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N-~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 10 SSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKS-GLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSS-CCCEECTTGGGSCSCCCEEECC
T ss_pred CCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeecc-ccCCcccccccccccccceecc
Confidence 44578888888889999999999999999866 5998875 5899999999999998 677775 568999999999999
Q ss_pred CCCccccCCCCCCCCCCCCccCeeeecc
Q 047598 671 GANLLREMPLGMKELKNLRTLSNFIVGK 698 (1112)
Q Consensus 671 ~~~~l~~lp~~i~~l~~L~~L~~~~~~~ 698 (1112)
+|. ++.+|.++....+|+.|++.+|..
T Consensus 89 ~N~-l~~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 89 FNA-LESLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp SSC-CSCCCSTTTCSCCCCEEECCSSCC
T ss_pred CCC-CcccChhhhccccccccccCCCcc
Confidence 999 778888866666799998877764
No 37
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=98.62 E-value=2.2e-06 Score=89.27 Aligned_cols=177 Identities=12% Similarity=0.082 Sum_probs=113.5
Q ss_pred cceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHH
Q 047598 178 RAVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSI 257 (1112)
Q Consensus 178 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~ 257 (1112)
..++||+.++++|.++|...-.. .....+.+.|+|++|+||||+|+.+++..... ..+ ..+|+...........
T Consensus 16 ~~l~~Re~ei~~l~~~l~~~l~~--~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~---~~~-~~~~~~~~~~~~~~~~ 89 (276)
T d1fnna2 16 KRLPHREQQLQQLDILLGNWLRN--PGHHYPRATLLGRPGTGKTVTLRKLWELYKDK---TTA-RFVYINGFIYRNFTAI 89 (276)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHS--TTSSCCEEEEECCTTSSHHHHHHHHHHHHTTS---CCC-EEEEEETTTCCSHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhC--CCCCCCceEEECCCCCCHHHHHHHHHHHHhcc---cCC-cEEEecchhhhhhhhh
Confidence 35899999999999988531000 12345678899999999999999999876422 222 3467777777888888
Q ss_pred HHHHHHHhcCCCCC-CCChHHHHHHHHHHh--CCCcEEEEEeCCCCCChhhHHHHHhcc---cC-CCCCcEEEEEcCChh
Q 047598 258 SKALLESITRKPCH-LNTLNEVQVDLKTAV--DGKRFLLVLDDVWNEDYSLWVDLKAPL---LA-AAPNSKMIITTRHSH 330 (1112)
Q Consensus 258 ~~~il~~l~~~~~~-~~~~~~~~~~l~~~l--~~kr~LlVlDdv~~~~~~~~~~l~~~l---~~-~~~gs~iivTTR~~~ 330 (1112)
...+....+..... ..........+.+.+ ......+++|+++.............+ .. ......+|.++....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 169 (276)
T d1fnna2 90 IGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDA 169 (276)
T ss_dssp HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHHHHHHHHHHTTCHHHHSSCCEEEEEEESSTH
T ss_pred hhhhHHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhhhhhhhhHHHHHhccccccccceEEeecCCchh
Confidence 88888887765432 334455555554443 345778888888765543333322211 11 123345555665544
Q ss_pred hhhhcC-------CCceeeCCCCChHhHHHHHHHhHh
Q 047598 331 VASTMG-------PIKHYNLKRLLDEDCWSIFIKHAY 360 (1112)
Q Consensus 331 v~~~~~-------~~~~~~l~~L~~~~~~~Lf~~~~~ 360 (1112)
...... ....+.+.+.+.++.++++.+++-
T Consensus 170 ~~~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~ 206 (276)
T d1fnna2 170 VLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAK 206 (276)
T ss_dssp HHHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHH
T ss_pred hhhhcchhhhhhhcchhccccchhHHHHHHHHHHHHH
Confidence 332211 234578999999999999987653
No 38
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.50 E-value=4.7e-07 Score=91.29 Aligned_cols=179 Identities=12% Similarity=0.106 Sum_probs=109.5
Q ss_pred cceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHH
Q 047598 178 RAVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSI 257 (1112)
Q Consensus 178 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~ 257 (1112)
.+++|.++.++.+..|+.. +....+-++|++|+||||+|+.+++..... .....+.-...+...+....
T Consensus 14 ~divg~~~~~~~L~~~i~~--------~~~~~lLl~Gp~G~GKttl~~~la~~l~~~---~~~~~~~e~~~~~~~~~~~~ 82 (227)
T d1sxjc2 14 DEVYGQNEVITTVRKFVDE--------GKLPHLLFYGPPGTGKTSTIVALAREIYGK---NYSNMVLELNASDDRGIDVV 82 (227)
T ss_dssp GGCCSCHHHHHHHHHHHHT--------TCCCCEEEECSSSSSHHHHHHHHHHHHHTT---SHHHHEEEECTTSCCSHHHH
T ss_pred HHccCcHHHHHHHHHHHHc--------CCCCeEEEECCCCCChhHHHHHHHHHhhcC---CCcceeEEecccccCCeeee
Confidence 4699999999999999865 122236699999999999999998864311 11111222223333333222
Q ss_pred HHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCCChhhHHHHHhcccCCCCCcEEEEEcCChh-hhh-hc
Q 047598 258 SKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNEDYSLWVDLKAPLLAAAPNSKMIITTRHSH-VAS-TM 335 (1112)
Q Consensus 258 ~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTTR~~~-v~~-~~ 335 (1112)
.......... .....+++-++|+|++.......-..+...+......++++++|.... +.. ..
T Consensus 83 ~~~~~~~~~~---------------~~~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~i~~~i~ 147 (227)
T d1sxjc2 83 RNQIKDFAST---------------RQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALL 147 (227)
T ss_dssp HTHHHHHHHB---------------CCSSSCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHH
T ss_pred ecchhhcccc---------------ccccCCCeEEEEEeccccchhhHHHHHHHHhhhcccceeeccccCcHHHhHHHHH
Confidence 1111111110 011124456889999987665555556666655566778888887543 222 12
Q ss_pred CCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCch
Q 047598 336 GPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLP 386 (1112)
Q Consensus 336 ~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glP 386 (1112)
.....+.+.+++.++-.+.+.+.+......-+ .+....|++.++|..
T Consensus 148 sr~~~i~~~~~~~~~i~~~l~~I~~~e~i~i~----~~~l~~i~~~s~Gd~ 194 (227)
T d1sxjc2 148 SQCTRFRFQPLPQEAIERRIANVLVHEKLKLS----PNAEKALIELSNGDM 194 (227)
T ss_dssp TTSEEEECCCCCHHHHHHHHHHHHHTTTCCBC----HHHHHHHHHHHTTCH
T ss_pred HHHhhhccccccccccccccccccccccccCC----HHHHHHHHHHcCCcH
Confidence 34567899999999999988877654332222 235678999998865
No 39
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.50 E-value=7.5e-07 Score=89.44 Aligned_cols=182 Identities=14% Similarity=0.104 Sum_probs=111.2
Q ss_pred CcceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHH
Q 047598 177 ERAVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLS 256 (1112)
Q Consensus 177 ~~~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~ 256 (1112)
-.+++|.++.++.+..|+.. ....-+.++|++|+||||+|+.+++...... ..+ .+.-+..+...+...
T Consensus 14 ~~d~ig~~~~~~~L~~~~~~--------~~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~--~~~-~~~~~n~~~~~~~~~ 82 (224)
T d1sxjb2 14 LSDIVGNKETIDRLQQIAKD--------GNMPHMIISGMPGIGKTTSVHCLAHELLGRS--YAD-GVLELNASDDRGIDV 82 (224)
T ss_dssp GGGCCSCTHHHHHHHHHHHS--------CCCCCEEEECSTTSSHHHHHHHHHHHHHGGG--HHH-HEEEECTTSCCSHHH
T ss_pred HHHhcCCHHHHHHHHHHHHc--------CCCCeEEEECCCCCCchhhHHHHHHHHhccc--ccc-ccccccccccCCcee
Confidence 35789999999999999975 1223367899999999999999887643220 111 122333444444433
Q ss_pred HHHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCCChhhHHHHHhcccCCCCCcEEEEEcCCh-hhhhh-
Q 047598 257 ISKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNEDYSLWVDLKAPLLAAAPNSKMIITTRHS-HVAST- 334 (1112)
Q Consensus 257 ~~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTTR~~-~v~~~- 334 (1112)
+...+......... ...++.-++|+|++..........+...+......+++++||... .+...
T Consensus 83 i~~~~~~~~~~~~~--------------~~~~~~kviiiDe~d~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~i~~~l 148 (224)
T d1sxjb2 83 VRNQIKHFAQKKLH--------------LPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPL 148 (224)
T ss_dssp HHTHHHHHHHBCCC--------------CCTTCCEEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGGSCHHH
T ss_pred hhhHHHHHHHhhcc--------------CCCcceEEEEEecccccchhHHHHHhhhccccccceeeeeccCchhhhhhHH
Confidence 33222222111110 012456688999998766544444544444455566776666654 33222
Q ss_pred cCCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCchH
Q 047598 335 MGPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLPL 387 (1112)
Q Consensus 335 ~~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glPl 387 (1112)
......+.+.+++.++-...+.+.+......-+ .+....|++.|+|.+-
T Consensus 149 ~sr~~~i~~~~~~~~~i~~~l~~i~~~e~~~i~----~~~l~~I~~~s~Gd~R 197 (224)
T d1sxjb2 149 QSQCAILRYSKLSDEDVLKRLLQIIKLEDVKYT----NDGLEAIIFTAEGDMR 197 (224)
T ss_dssp HTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBC----HHHHHHHHHHHTTCHH
T ss_pred HHHHHHhhhcccchhhhHHHHHHHHHhcccCCC----HHHHHHHHHHcCCcHH
Confidence 234467899999999999998877654332222 2356889999999874
No 40
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.44 E-value=3.7e-07 Score=92.89 Aligned_cols=195 Identities=11% Similarity=0.045 Sum_probs=114.7
Q ss_pred cceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHH
Q 047598 178 RAVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSI 257 (1112)
Q Consensus 178 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~ 257 (1112)
..++|.+..++.+..++.. .....+.++|++|+||||+|+.++++.... +........+..+.......+
T Consensus 12 ~diig~~~~~~~l~~~i~~--------~~~~~lll~Gp~G~GKTtl~~~i~~~l~~~--~~~~~~~~~~~~~~~~~~~~~ 81 (237)
T d1sxjd2 12 DEVTAQDHAVTVLKKTLKS--------ANLPHMLFYGPPGTGKTSTILALTKELYGP--DLMKSRILELNASDERGISIV 81 (237)
T ss_dssp TTCCSCCTTHHHHHHHTTC--------TTCCCEEEECSTTSSHHHHHHHHHHHHHHH--HHHTTSEEEECSSSCCCHHHH
T ss_pred HHccCcHHHHHHHHHHHHc--------CCCCeEEEECCCCCChHHHHHHHHHHHcCC--cccccchhheeccccccchHH
Confidence 4588999999999999854 223347799999999999999998764211 011122233444444444333
Q ss_pred HHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCCChhhHHHHHhcccCCCCCcEEEEEcCCh-hhhhhc-
Q 047598 258 SKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNEDYSLWVDLKAPLLAAAPNSKMIITTRHS-HVASTM- 335 (1112)
Q Consensus 258 ~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTTR~~-~v~~~~- 335 (1112)
...+-....... ..... ..+......+.-++|+|++.......+..+...+......+++|+|+... .+....
T Consensus 82 ~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 156 (237)
T d1sxjd2 82 REKVKNFARLTV-SKPSK----HDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLA 156 (237)
T ss_dssp TTHHHHHHHSCC-CCCCT----THHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHH
T ss_pred HHHHHHHhhhhh-hhhhH----HHHhhccccCceEEEEecccccCHHHHHHHhhcccccccccccccccccccccccccc
Confidence 322222111111 11111 11222334455579999998776666666655555555566777776543 222211
Q ss_pred CCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCch-HHHHH
Q 047598 336 GPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLP-LAAKS 391 (1112)
Q Consensus 336 ~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glP-lai~~ 391 (1112)
.....+.+.+++.++..+++.+.+....-.-+ .++.+.|++.++|-+ -|+..
T Consensus 157 sr~~~i~f~~~~~~~~~~~L~~i~~~e~i~i~----~~~l~~ia~~s~gd~R~ai~~ 209 (237)
T d1sxjd2 157 SQCSKFRFKALDASNAIDRLRFISEQENVKCD----DGVLERILDISAGDLRRGITL 209 (237)
T ss_dssp HHSEEEECCCCCHHHHHHHHHHHHHTTTCCCC----HHHHHHHHHHTSSCHHHHHHH
T ss_pred chhhhhccccccccccchhhhhhhhhhcCcCC----HHHHHHHHHHcCCCHHHHHHH
Confidence 22367899999999999999887654332222 245678888987754 44443
No 41
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.38 E-value=7.7e-07 Score=89.94 Aligned_cols=179 Identities=16% Similarity=0.097 Sum_probs=108.0
Q ss_pred CcceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCce-eEEEEeCCCCCHH
Q 047598 177 ERAVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDI-KAWVCISDVFDVL 255 (1112)
Q Consensus 177 ~~~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~-~~wv~~~~~~~~~ 255 (1112)
-.+++|.+..++.+..|+.. ....-+.++|++|+||||+|+.+.+..... .+.. .+-+..+...+..
T Consensus 23 ~~diig~~~~~~~l~~~i~~--------~~~~~lll~Gp~G~GKTtla~~iak~l~~~----~~~~~~~e~n~s~~~~~~ 90 (231)
T d1iqpa2 23 LDDIVGQEHIVKRLKHYVKT--------GSMPHLLFAGPPGVGKTTAALALARELFGE----NWRHNFLELNASDERGIN 90 (231)
T ss_dssp TTTCCSCHHHHHHHHHHHHH--------TCCCEEEEESCTTSSHHHHHHHHHHHHHGG----GHHHHEEEEETTCHHHHH
T ss_pred HHHccCcHHHHHHHHHHHHc--------CCCCeEEEECCCCCcHHHHHHHHHHHHHhc----ccCCCeeEEecCcccchh
Confidence 35689999999999999976 233457799999999999999998754211 1211 1222333221111
Q ss_pred HHHHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCCChhhHHHHHhcccCCCCCcEEEEEcCCh-hhhhh
Q 047598 256 SISKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNEDYSLWVDLKAPLLAAAPNSKMIITTRHS-HVAST 334 (1112)
Q Consensus 256 ~~~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTTR~~-~v~~~ 334 (1112)
.+...+...... ......++.++++|++.......+..+...+........+|.||... .+...
T Consensus 91 ~~~~~~~~~~~~---------------~~~~~~~~~iilide~d~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~~~i~~~ 155 (231)
T d1iqpa2 91 VIREKVKEFART---------------KPIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEP 155 (231)
T ss_dssp TTHHHHHHHHHS---------------CCGGGCSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHH
T ss_pred HHHHHHHHHHhh---------------hhccCCCceEEeehhhhhcchhHHHHHhhhcccCCcceEEEeccCChhhchHh
Confidence 111111111000 01123467889999998776666666666555444455666666543 33222
Q ss_pred c-CCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCch
Q 047598 335 M-GPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLP 386 (1112)
Q Consensus 335 ~-~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glP 386 (1112)
. .....+.+.+.+.++....+.+.+....-.- ..+..+.|++.|+|..
T Consensus 156 l~sR~~~i~~~~~~~~~~~~~l~~~~~~e~i~i----~~~~l~~I~~~~~gdi 204 (231)
T d1iqpa2 156 IQSRCAIFRFRPLRDEDIAKRLRYIAENEGLEL----TEEGLQAILYIAEGDM 204 (231)
T ss_dssp HHHTEEEEECCCCCHHHHHHHHHHHHHTTTCEE----CHHHHHHHHHHHTTCH
T ss_pred HhCccccccccccchhhHHHHHHHHHHHhCCCC----CHHHHHHHHHHcCCCH
Confidence 1 2346789999999999998888775433211 2335678889998864
No 42
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.36 E-value=1e-05 Score=81.62 Aligned_cols=186 Identities=16% Similarity=0.127 Sum_probs=110.8
Q ss_pred cceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcccccccc-----------------CCCC
Q 047598 178 RAVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAK-----------------DFKF 240 (1112)
Q Consensus 178 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~-----------------~~~F 240 (1112)
..++|.++.++.+..++.. + .-.+.+.|+|.+|+||||+|+.+++....... ..+|
T Consensus 12 ~dlig~~~~~~~L~~~i~~------~-~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 84 (239)
T d1njfa_ 12 ADVVGQEHVLTALANGLSL------G-RIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFV 84 (239)
T ss_dssp GGSCSCHHHHHHHHHHHHT------T-CCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHTCCT
T ss_pred HHccChHHHHHHHHHHHHc------C-CCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchHHHHHHcCCCC
Confidence 4789999999999999865 1 22345779999999999999988765321100 0001
Q ss_pred ceeEEEEeCCCCCHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCCChhhHHHHHhcccCCCCCc
Q 047598 241 DIKAWVCISDVFDVLSISKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNEDYSLWVDLKAPLLAAAPNS 320 (1112)
Q Consensus 241 ~~~~wv~~~~~~~~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs 320 (1112)
+ ++.+..+....+.. .+.+++.+... ...+++-++|+|+++......-..+...+.....++
T Consensus 85 ~-~~~~~~~~~~~i~~-ir~~~~~~~~~----------------~~~~~~kviiIde~d~l~~~~q~~Llk~lE~~~~~~ 146 (239)
T d1njfa_ 85 D-LIEIDAASRTKVED-TRDLLDNVQYA----------------PARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHV 146 (239)
T ss_dssp T-EEEEETTCSSSHHH-HHHHHHSCCCS----------------CSSSSSEEEEEETGGGSCHHHHHHHHHHHHSCCTTE
T ss_pred e-EEEecchhcCCHHH-HHHHHHHHHhc----------------cccCCCEEEEEECcccCCHHHHHHHHHHHhcCCCCe
Confidence 1 12222222222111 12222222111 012456689999998766555455666665555677
Q ss_pred EEEEEcCChh-hhhhc-CCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCchH-HHHHH
Q 047598 321 KMIITTRHSH-VASTM-GPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLPL-AAKSL 392 (1112)
Q Consensus 321 ~iivTTR~~~-v~~~~-~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glPl-ai~~~ 392 (1112)
++|+||.+.. +.... .....+.+.+++.++-.+.+.+.+-.....-+ ++....|++.++|.+- |+..+
T Consensus 147 ~~il~tn~~~~i~~~i~SRc~~i~~~~~~~~~i~~~l~~i~~~e~~~~~----~~~l~~i~~~s~Gd~R~ain~l 217 (239)
T d1njfa_ 147 KFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHE----PRALQLLARAAEGSLRDALSLT 217 (239)
T ss_dssp EEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBC----HHHHHHHHHHTTTCHHHHHHHH
T ss_pred EEEEEcCCccccChhHhhhhcccccccCcHHHhhhHHHHHHhhhccCCC----HHHHHHHHHHcCCCHHHHHHHH
Confidence 8877776543 22221 23467899999999988888776643322112 3356789999999884 55444
No 43
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.30 E-value=1.7e-06 Score=88.67 Aligned_cols=195 Identities=11% Similarity=0.093 Sum_probs=101.2
Q ss_pred CcceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcccccc-ccCCCCceeEEEEeCCC----
Q 047598 177 ERAVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLN-AKDFKFDIKAWVCISDV---- 251 (1112)
Q Consensus 177 ~~~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~-~~~~~F~~~~wv~~~~~---- 251 (1112)
-..++|.++..+.+.+++.. .....-+.|+|++|+||||+|+.+++..... .....++...|...+..
T Consensus 10 ~~diig~~~~~~~L~~~~~~-------~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (252)
T d1sxje2 10 LNALSHNEELTNFLKSLSDQ-------PRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLEL 82 (252)
T ss_dssp GGGCCSCHHHHHHHHTTTTC-------TTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC------------------
T ss_pred HHHccCcHHHHHHHHHHHHc-------CCCCCeEEEECCCCCCHHHHHHHHHHhhcCccccccccccccccccccchhhh
Confidence 34689998888888777654 1122336799999999999999998863211 00011222222211110
Q ss_pred -----------------CCHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCCChhhHHHHHhccc
Q 047598 252 -----------------FDVLSISKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNEDYSLWVDLKAPLL 314 (1112)
Q Consensus 252 -----------------~~~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~ 314 (1112)
................... ... ..-.....++.-++|+|+++......+..+...+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~iiiide~d~l~~~~~~~l~~~~e 156 (252)
T d1sxje2 83 NVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQ----VDF--QDSKDGLAHRYKCVIINEANSLTKDAQAALRRTME 156 (252)
T ss_dssp CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------------CCEEEEEECTTSSCHHHHHHHHHHHH
T ss_pred hhccCCccceeeecccccCCcceeeehhhhhhhhhh----hhh--hhcccccCCCceEEEeccccccccccchhhhcccc
Confidence 0001111111111110000 000 00001112345589999998766666666666665
Q ss_pred CCCCCcEEEEEcCChh-hhhh-cCCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCchH
Q 047598 315 AAAPNSKMIITTRHSH-VAST-MGPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLPL 387 (1112)
Q Consensus 315 ~~~~gs~iivTTR~~~-v~~~-~~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glPl 387 (1112)
.....+++|+||.+.+ +... .+....+++.+++.++..+++...+-..+..... +++.+.|++.+.|.+-
T Consensus 157 ~~~~~~~~Il~tn~~~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~---~~~l~~i~~~s~Gd~R 228 (252)
T d1sxje2 157 KYSKNIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLET---KDILKRIAQASNGNLR 228 (252)
T ss_dssp HSTTTEEEEEEESCSCSSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCEECC---SHHHHHHHHHHTTCHH
T ss_pred cccccccceeeeccccchhhhhhcchheeeecccchhhHHHHHHHHHHHcCCCCCc---HHHHHHHHHHcCCcHH
Confidence 5556778777776543 2111 1223578899999999999887655322211111 2345778999988764
No 44
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.30 E-value=3.2e-06 Score=85.11 Aligned_cols=158 Identities=16% Similarity=0.185 Sum_probs=97.3
Q ss_pred ceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccc-cCCCCceeEEE-EeCCCCCHHH
Q 047598 179 AVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNA-KDFKFDIKAWV-CISDVFDVLS 256 (1112)
Q Consensus 179 ~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~-~~~~F~~~~wv-~~~~~~~~~~ 256 (1112)
.++||++++++++..|.. ....-+.+||.+|+|||+++..+++...... +....+..+|. +++.-
T Consensus 19 ~~igRd~Ei~~l~~iL~r--------~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~l----- 85 (268)
T d1r6bx2 19 PLIGREKELERAIQVLCR--------RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL----- 85 (268)
T ss_dssp CCCSCHHHHHHHHHHHTS--------SSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC-------
T ss_pred cccChHHHHHHHHHHHhc--------CccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeechH-----
Confidence 478999999999999975 1223456999999999999988877542110 00122344443 22211
Q ss_pred HHHHHHHHhcCCCCCCCChHHHHHHHHHHh-CCCcEEEEEeCCCCC--------ChhhHHHHHhcccCCCCCcEEEEEcC
Q 047598 257 ISKALLESITRKPCHLNTLNEVQVDLKTAV-DGKRFLLVLDDVWNE--------DYSLWVDLKAPLLAAAPNSKMIITTR 327 (1112)
Q Consensus 257 ~~~~il~~l~~~~~~~~~~~~~~~~l~~~l-~~kr~LlVlDdv~~~--------~~~~~~~l~~~l~~~~~gs~iivTTR 327 (1112)
+ .........++....+...+ +.+..++++|++..- .......+..|.... ..-++|.||.
T Consensus 86 --------i-ag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~r-g~i~vIgatT 155 (268)
T d1r6bx2 86 --------L-AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS-GKIRVIGSTT 155 (268)
T ss_dssp ----------CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSS-CCCEEEEEEC
T ss_pred --------h-ccCccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCCCCccccHHHHhhHHHhC-CCCeEEEeCC
Confidence 0 01112345555555554444 456799999998542 112344455544432 3458888888
Q ss_pred ChhhhhhcC-------CCceeeCCCCChHhHHHHHHHhH
Q 047598 328 HSHVASTMG-------PIKHYNLKRLLDEDCWSIFIKHA 359 (1112)
Q Consensus 328 ~~~v~~~~~-------~~~~~~l~~L~~~~~~~Lf~~~~ 359 (1112)
..+...... -...+.+++++.+++.+++...+
T Consensus 156 ~eey~~~~e~d~al~rrF~~I~V~Eps~e~t~~IL~~~~ 194 (268)
T d1r6bx2 156 YQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 194 (268)
T ss_dssp HHHHHCCCCCTTSSGGGEEEEECCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcHHHHhhhcccccCCCCHHHHHHHHHHhh
Confidence 776654432 23578999999999999987644
No 45
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.23 E-value=2.3e-08 Score=108.64 Aligned_cols=85 Identities=18% Similarity=0.166 Sum_probs=55.6
Q ss_pred cccCCcccEEEeccccccc-----ccccccCCCcCcEEEcccccccc-----------ccccccCCCCCcEEeecCCCCC
Q 047598 588 LPKFKRLRVLSLQRYYIGE-----LLVSFEDLKLLRYLNLADTMIRT-----------LPESTNSLLNLEILILRNCSRL 651 (1112)
Q Consensus 588 ~~~~~~L~~L~L~~~~~~~-----lp~~~~~l~~Lr~L~Ls~n~i~~-----------lp~~i~~L~~L~~L~L~~~~~l 651 (1112)
+.....|+.|+|++|.++. +-..+...++|+.|+++++.... +...+...++|+.|+|++| .+
T Consensus 27 L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n-~i 105 (344)
T d2ca6a1 27 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN-AF 105 (344)
T ss_dssp HHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC-CC
T ss_pred HhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccc-cc
Confidence 4556778888888887632 33456777888888887654332 2233456778888888887 33
Q ss_pred cc-----cCccccCCccccEEeecCCC
Q 047598 652 KK-----LPSKMRNLINLHHLDIKGAN 673 (1112)
Q Consensus 652 ~~-----lp~~i~~L~~L~~L~L~~~~ 673 (1112)
+. +...+...++|++|++++|.
T Consensus 106 ~~~~~~~l~~~l~~~~~L~~L~l~~n~ 132 (344)
T d2ca6a1 106 GPTAQEPLIDFLSKHTPLEHLYLHNNG 132 (344)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSC
T ss_pred ccccccchhhhhcccccchheeccccc
Confidence 32 33344566778888887776
No 46
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.20 E-value=5.3e-09 Score=113.92 Aligned_cols=92 Identities=15% Similarity=0.105 Sum_probs=64.9
Q ss_pred ccccccccCCCcCcEEEccccccc-----cccccccCCCCCcEEeecCCCCCcc-----------cCccccCCccccEEe
Q 047598 605 GELLVSFEDLKLLRYLNLADTMIR-----TLPESTNSLLNLEILILRNCSRLKK-----------LPSKMRNLINLHHLD 668 (1112)
Q Consensus 605 ~~lp~~~~~l~~Lr~L~Ls~n~i~-----~lp~~i~~L~~L~~L~L~~~~~l~~-----------lp~~i~~L~~L~~L~ 668 (1112)
..+...+.....|++|+|++|.|. .+-..+...++|+.|++++|. ... +...+..+++|++|+
T Consensus 21 ~~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~L~~L~ 99 (344)
T d2ca6a1 21 KSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIF-TGRVKDEIPEALRLLLQALLKCPKLHTVR 99 (344)
T ss_dssp HTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCC-TTSCGGGSHHHHHHHHHHHTTCTTCCEEE
T ss_pred HHHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCc-ccccccccchHHHHHHHHHhhCCCccccc
Confidence 445566777889999999999875 355667889999999999873 222 223356788999999
Q ss_pred ecCCCcccc----CCCCCCCCCCCCccCeeeec
Q 047598 669 IKGANLLRE----MPLGMKELKNLRTLSNFIVG 697 (1112)
Q Consensus 669 L~~~~~l~~----lp~~i~~l~~L~~L~~~~~~ 697 (1112)
|++|.+... +...+...++|+.|++.++.
T Consensus 100 L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~ 132 (344)
T d2ca6a1 100 LSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNG 132 (344)
T ss_dssp CCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSC
T ss_pred ccccccccccccchhhhhcccccchheeccccc
Confidence 999874221 22334566788888776654
No 47
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=98.11 E-value=5.2e-05 Score=78.90 Aligned_cols=183 Identities=12% Similarity=0.084 Sum_probs=106.0
Q ss_pred CcceecchhhHHHHHHHHhcCCCCCC-CCCCeEEEEEEccCCCcHHHHHHHHhcccccccc-CCCCceeEEEEeCCCCCH
Q 047598 177 ERAVYGRDKDKARILKMVLSTDEKTD-DDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAK-DFKFDIKAWVCISDVFDV 254 (1112)
Q Consensus 177 ~~~~vGr~~~~~~l~~~L~~~~~~~~-~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~-~~~F~~~~wv~~~~~~~~ 254 (1112)
+..++||+.+.++|.+.+...-.... ......++.|+|++|+|||++|+.+++....... ........++.+......
T Consensus 15 P~~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 94 (287)
T d1w5sa2 15 PPELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNL 94 (287)
T ss_dssp CSSCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeeccccccch
Confidence 45788999999999887632110000 1122345677899999999999999987531100 012245667777777788
Q ss_pred HHHHHHHHHHhcCCCC-CCCChHHHHHHHHHHh--CCCcEEEEEeCCCC------CChhhHHH---HHhcccCC--CCCc
Q 047598 255 LSISKALLESITRKPC-HLNTLNEVQVDLKTAV--DGKRFLLVLDDVWN------EDYSLWVD---LKAPLLAA--APNS 320 (1112)
Q Consensus 255 ~~~~~~il~~l~~~~~-~~~~~~~~~~~l~~~l--~~kr~LlVlDdv~~------~~~~~~~~---l~~~l~~~--~~gs 320 (1112)
...........+.... ...........+.... .+...++++|.+.. ...+.... +...+... ....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~ 174 (287)
T d1w5sa2 95 YTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPSRDGVNRI 174 (287)
T ss_dssp HHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHHHHSCCTTSCCBE
T ss_pred hhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccccchhHHHHHHHHHHhcchhhcccce
Confidence 8888888887776543 2334444444444433 35567788887742 11111211 22222221 1222
Q ss_pred E-EEEEcCChhhhh--------hcCCCceeeCCCCChHhHHHHHHHhH
Q 047598 321 K-MIITTRHSHVAS--------TMGPIKHYNLKRLLDEDCWSIFIKHA 359 (1112)
Q Consensus 321 ~-iivTTR~~~v~~--------~~~~~~~~~l~~L~~~~~~~Lf~~~~ 359 (1112)
. |++++....... .......+.+++++.++..+++..++
T Consensus 175 ~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~ 222 (287)
T d1w5sa2 175 GFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRA 222 (287)
T ss_dssp EEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHH
T ss_pred eEEeecccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhH
Confidence 3 444443332211 11124578899999999999998776
No 48
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.09 E-value=1.8e-05 Score=80.92 Aligned_cols=198 Identities=14% Similarity=0.110 Sum_probs=108.3
Q ss_pred CcceecchhhHHHHHHHHhcC---------CCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEE
Q 047598 177 ERAVYGRDKDKARILKMVLST---------DEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVC 247 (1112)
Q Consensus 177 ~~~~vGr~~~~~~l~~~L~~~---------~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~ 247 (1112)
-..++|.+..+++|.+++... .....+....+.+.++|++|+||||+|+.+++... + ..+++.
T Consensus 13 ~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~-------~-~~~~~~ 84 (253)
T d1sxja2 13 LQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELG-------Y-DILEQN 84 (253)
T ss_dssp GGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTT-------C-EEEEEC
T ss_pred HHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHH-------h-hhhccc
Confidence 357899999999999988530 00011233456889999999999999999998642 2 244566
Q ss_pred eCCCCCHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCCC---hhhHHHHHhcccCCCCCcEEEE
Q 047598 248 ISDVFDVLSISKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNED---YSLWVDLKAPLLAAAPNSKMII 324 (1112)
Q Consensus 248 ~~~~~~~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~---~~~~~~l~~~l~~~~~gs~iiv 324 (1112)
.+...+...+ .................. .........++..++++|++.... ...+..+....... ...+++
T Consensus 85 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vi~ide~~~~~~~~~~~~~~~~~~~~~~--~~~ii~ 159 (253)
T d1sxja2 85 ASDVRSKTLL-NAGVKNALDNMSVVGYFK--HNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKT--STPLIL 159 (253)
T ss_dssp TTSCCCHHHH-HHTGGGGTTBCCSTTTTT--C----CCSSTTSEEEEECSGGGCCTTSTTHHHHHHHHHHHC--SSCEEE
T ss_pred cccchhhHHH-HHHHHHHhhcchhhhhhh--hhhhcccccccceEEEeeeccccccchhhhhHHHhhhhccc--cccccc
Confidence 6655544333 222222211111000000 001112345678899999986432 22343443322222 223444
Q ss_pred EcC--Chh-hhhhcCCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCch-HHHHH
Q 047598 325 TTR--HSH-VASTMGPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLP-LAAKS 391 (1112)
Q Consensus 325 TTR--~~~-v~~~~~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glP-lai~~ 391 (1112)
|+. ... +.........+.+.+++.++-...+...+-..+..-++. ...+|++.++|-. -||..
T Consensus 160 i~~~~~~~~~~~l~~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~~----~l~~i~~~s~GDiR~ai~~ 226 (253)
T d1sxja2 160 ICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPN----VIDRLIQTTRGDIRQVINL 226 (253)
T ss_dssp EESCTTSSTTGGGTTTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCTT----HHHHHHHHTTTCHHHHHHH
T ss_pred ccccccccccccccceeeeeeccccchhHHHHHHHHHHHHhCCCCCHH----HHHHHHHhCCCcHHHHHHH
Confidence 433 222 222223446889999999998888877553222111222 3577889999966 44433
No 49
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.06 E-value=7.1e-06 Score=77.46 Aligned_cols=154 Identities=14% Similarity=0.121 Sum_probs=86.2
Q ss_pred ceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccc-cCCCCceeEEEEeCCCCCHHHH
Q 047598 179 AVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNA-KDFKFDIKAWVCISDVFDVLSI 257 (1112)
Q Consensus 179 ~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~-~~~~F~~~~wv~~~~~~~~~~~ 257 (1112)
.++||+++++++...|.. ....-+.++|.+|+|||+++..++++..... +....+..+|.- +...+
T Consensus 23 ~~igRd~Ei~~l~~iL~r--------~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~l-----d~~~L 89 (195)
T d1jbka_ 23 PVIGRDEEIRRTIQVLQR--------RTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL-----DMGAL 89 (195)
T ss_dssp CCCSCHHHHHHHHHHHTS--------SSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEE-----CHHHH
T ss_pred CCcCcHHHHHHHHHHHhc--------cCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEe-----eHHHH
Confidence 478999999999999975 1223467999999999999988877542110 002223444432 11111
Q ss_pred HHHHHHHhcCCCCCCCChHHHHHHHHHHh--CCCcEEEEEeCCCCCC-------hhhHHHHHhcccCCCCCcEEEEEcCC
Q 047598 258 SKALLESITRKPCHLNTLNEVQVDLKTAV--DGKRFLLVLDDVWNED-------YSLWVDLKAPLLAAAPNSKMIITTRH 328 (1112)
Q Consensus 258 ~~~il~~l~~~~~~~~~~~~~~~~l~~~l--~~kr~LlVlDdv~~~~-------~~~~~~l~~~l~~~~~gs~iivTTR~ 328 (1112)
+. +. ....+.++....+.+.+ ...+.++++|++...- ..+..++..|.... ..-++|.||..
T Consensus 90 ----iA---g~-~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~r-g~l~~IgatT~ 160 (195)
T d1jbka_ 90 ----VA---GA-KYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR-GELHCVGATTL 160 (195)
T ss_dssp ----HT---TT-CSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCHHHHHHHHHT-TSCCEEEEECH
T ss_pred ----hc---cC-CccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCCCCcccHHHHHHHHHhC-CCceEEecCCH
Confidence 10 00 01112333333333333 3458999999985420 01122333333332 34578888876
Q ss_pred hhhhhhcC-------CCceeeCCCCChHhHHHH
Q 047598 329 SHVASTMG-------PIKHYNLKRLLDEDCWSI 354 (1112)
Q Consensus 329 ~~v~~~~~-------~~~~~~l~~L~~~~~~~L 354 (1112)
.+...... ....+.+++.+.+++..+
T Consensus 161 eey~~~~e~d~aL~rrF~~I~V~Ep~~e~t~~I 193 (195)
T d1jbka_ 161 DEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 193 (195)
T ss_dssp HHHHHHTTTCHHHHTTEEEEECCCCCHHHHHTT
T ss_pred HHHHHHHHcCHHHHhcCCEeecCCCCHHHHHHH
Confidence 65544322 235788888888887654
No 50
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.01 E-value=5.1e-05 Score=74.05 Aligned_cols=180 Identities=10% Similarity=0.052 Sum_probs=104.8
Q ss_pred chhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHHHHHHH
Q 047598 183 RDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSISKALL 262 (1112)
Q Consensus 183 r~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~~~~il 262 (1112)
.+...+++.+.+.. +.-...+.++|+.|+||||+|+.+++..--... .... ......+ .+.+.
T Consensus 7 ~~~~~~~l~~~~~~-------~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~-~~~~-----~~~~~~~----~~~i~ 69 (207)
T d1a5ta2 7 LRPDFEKLVASYQA-------GRGHHALLIQALPGMGDDALIYALSRYLLCQQP-QGHK-----SCGHCRG----CQLMQ 69 (207)
T ss_dssp GHHHHHHHHHHHHT-------TCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSC-BTTB-----CCSCSHH----HHHHH
T ss_pred cHHHHHHHHHHHHc-------CCcCeEEEEECCCCCcHHHHHHHHHHhcccccc-cccc-----cccccch----hhhhh
Confidence 34567778887765 122446889999999999999988764311100 0000 0000000 01111
Q ss_pred HHhcCC-------C-CCCCChHHHHHHHHHHh-----CCCcEEEEEeCCCCCChhhHHHHHhcccCCCCCcEEEEEcCCh
Q 047598 263 ESITRK-------P-CHLNTLNEVQVDLKTAV-----DGKRFLLVLDDVWNEDYSLWVDLKAPLLAAAPNSKMIITTRHS 329 (1112)
Q Consensus 263 ~~l~~~-------~-~~~~~~~~~~~~l~~~l-----~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTTR~~ 329 (1112)
...... . ...-..++.. .+.+.+ .+++-++|+||++.........+...+-....++.+|+||++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~i~~~~ir-~l~~~~~~~~~~~~~kviIide~d~l~~~a~n~Llk~lEep~~~~~fIl~t~~~ 148 (207)
T d1a5ta2 70 AGTHPDYYTLAPEKGKNTLGVDAVR-EVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREP 148 (207)
T ss_dssp HTCCTTEEEECCCTTCSSBCHHHHH-HHHHHTTSCCTTSSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEEESCG
T ss_pred hccccccchhhhhhcccccccchhh-HHhhhhhhccccCccceEEechhhhhhhhhhHHHHHHHHhhcccceeeeeecCh
Confidence 111000 0 0111222222 222222 3567799999998877777777877777666788888888775
Q ss_pred h-hhhhc-CCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCchHHH
Q 047598 330 H-VASTM-GPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLPLAA 389 (1112)
Q Consensus 330 ~-v~~~~-~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glPlai 389 (1112)
. +.... +....+.+.+++.++....+....- .+ ++.+..|++.++|.|-.+
T Consensus 149 ~~ll~tI~SRc~~i~~~~~~~~~~~~~L~~~~~-----~~----~~~~~~i~~~s~Gs~r~a 201 (207)
T d1a5ta2 149 ERLLATLRSRCRLHYLAPPPEQYAVTWLSREVT-----MS----QDALLAALRLSAGSPGAA 201 (207)
T ss_dssp GGSCHHHHTTSEEEECCCCCHHHHHHHHHHHCC-----CC----HHHHHHHHHHTTTCHHHH
T ss_pred hhhhhhhcceeEEEecCCCCHHHHHHHHHHcCC-----CC----HHHHHHHHHHcCCCHHHH
Confidence 3 33322 3346889999999999888865431 11 235677889999988543
No 51
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=97.91 E-value=0.00011 Score=73.78 Aligned_cols=176 Identities=15% Similarity=0.116 Sum_probs=98.6
Q ss_pred cceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHH
Q 047598 178 RAVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSI 257 (1112)
Q Consensus 178 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~ 257 (1112)
..+||.+..++++..++..... .....+-+.++|++|+||||+|+.+++..... ..+++.+....
T Consensus 9 ddivGq~~~~~~L~~~i~~~~~---~~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~--------~~~~~~~~~~~---- 73 (239)
T d1ixsb2 9 DEYIGQERLKQKLRVYLEAAKA---RKEPLEHLLLFGPPGLGKTTLAHVIAHELGVN--------LRVTSGPAIEK---- 73 (239)
T ss_dssp GGSCSCHHHHHHHHHHHHHHTT---SSSCCCCEEEECCTTSCHHHHHHHHHHHHTCC--------EEEEETTTCCS----
T ss_pred HHhCCHHHHHHHHHHHHHHHHh---cCCCCCeEEEECCCCCCHHHHHHHHHHHhCCC--------eEeccCCcccc----
Confidence 4689999999988888753111 12234556799999999999999999865322 23333332222
Q ss_pred HHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCCChhhHHHHHhccc------------------CCCCC
Q 047598 258 SKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNEDYSLWVDLKAPLL------------------AAAPN 319 (1112)
Q Consensus 258 ~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~------------------~~~~g 319 (1112)
.......+...+.. +.++++|++.......-+.+..... ...+.
T Consensus 74 -----------------~~~~~~~~~~~~~~-~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 135 (239)
T d1ixsb2 74 -----------------PGDLAAILANSLEE-GDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPR 135 (239)
T ss_dssp -----------------HHHHHHHHHTTCCT-TCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCC
T ss_pred -----------------chhhHHHHHhhccC-CCeeeeecccccchhHHHhhhhhhhhhhhhhhhccchhhhhcccCCCC
Confidence 12222223333333 3456678886543222122211110 01123
Q ss_pred cEEEEEc-CChhh--hhhcCCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCchHHHH
Q 047598 320 SKMIITT-RHSHV--ASTMGPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLPLAAK 390 (1112)
Q Consensus 320 s~iivTT-R~~~v--~~~~~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glPlai~ 390 (1112)
..++.+| +.... +........+.+...+.++..++....+...... ...+....|++.++|.+-.+.
T Consensus 136 ~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~----~~~~~l~~ia~~s~gd~R~a~ 205 (239)
T d1ixsb2 136 FTLIGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVR----ITEEAALEIGRRSRGTMRVAK 205 (239)
T ss_dssp CEEEEEESCCSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCC----BCHHHHHHHHHHTTSSHHHHH
T ss_pred EEEEeeccCcccccchhhcccceeeEeeccChhhhhHHHHHHHHHhCCc----cchHHHHHHHHHcCCCHHHHH
Confidence 3444444 33222 2222345678889999999988887766443321 223467889999999775443
No 52
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=97.82 E-value=0.00022 Score=71.54 Aligned_cols=181 Identities=13% Similarity=0.075 Sum_probs=99.5
Q ss_pred cceecchhhHHHHHHH---HhcCCC-CCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCC
Q 047598 178 RAVYGRDKDKARILKM---VLSTDE-KTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFD 253 (1112)
Q Consensus 178 ~~~vGr~~~~~~l~~~---L~~~~~-~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~ 253 (1112)
.+++|.++.+++|.+. +..+.. ...+....+-+.++|++|+|||++|+.+++..... .+-+..+.-.+
T Consensus 12 ~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~--------~~~i~~~~l~~ 83 (256)
T d1lv7a_ 12 ADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVP--------FFTISGSDFVE 83 (256)
T ss_dssp GGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCC--------EEEECSCSSTT
T ss_pred HHHhchHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCC--------EEEEEhHHhhh
Confidence 5788999888877554 332110 00012234567899999999999999999865322 12223222211
Q ss_pred HHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCC----------Chhh----HHHHHhcccC--CC
Q 047598 254 VLSISKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNE----------DYSL----WVDLKAPLLA--AA 317 (1112)
Q Consensus 254 ~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~----------~~~~----~~~l~~~l~~--~~ 317 (1112)
. ........+...+...-+..+++|++||++.. .... ...+...+.. ..
T Consensus 84 ~---------------~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~ 148 (256)
T d1lv7a_ 84 M---------------FVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGN 148 (256)
T ss_dssp S---------------CCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSS
T ss_pred c---------------chhHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCC
Confidence 0 01122233333444444677899999999530 0011 2223332321 22
Q ss_pred CCcEEEEEcCChhhhh-hc----CCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCch
Q 047598 318 PNSKMIITTRHSHVAS-TM----GPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLP 386 (1112)
Q Consensus 318 ~gs~iivTTR~~~v~~-~~----~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glP 386 (1112)
.+--||.||..++... .+ .-.+.+.+...+.++-.++|..+..+... ..+.. ...+++.+.|..
T Consensus 149 ~~v~vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~-~~~~~----~~~la~~t~G~s 217 (256)
T d1lv7a_ 149 EGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPL-APDID----AAIIARGTPGFS 217 (256)
T ss_dssp SCEEEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCB-CTTCC----HHHHHHTCTTCC
T ss_pred CCEEEEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCc-CcccC----HHHHHHhCCCCC
Confidence 3445565777654432 11 13468899999999999999877643322 22222 255777887754
No 53
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=97.81 E-value=0.00015 Score=72.83 Aligned_cols=175 Identities=14% Similarity=0.075 Sum_probs=97.7
Q ss_pred cceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHH
Q 047598 178 RAVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSI 257 (1112)
Q Consensus 178 ~~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~ 257 (1112)
..++|.+..++++..++..... .+...+-+.++|++|+||||+|+.+++.... + .+.++.+......++
T Consensus 9 ~divGqe~~~~~l~~~i~~~~~---~~~~~~~~L~~GPpGtGKT~lA~~la~~~~~-------~-~~~~~~~~~~~~~~~ 77 (238)
T d1in4a2 9 DEFIGQENVKKKLSLALEAAKM---RGEVLDHVLLAGPPGLGKTTLAHIIASELQT-------N-IHVTSGPVLVKQGDM 77 (238)
T ss_dssp GGCCSCHHHHHHHHHHHHHHHH---HTCCCCCEEEESSTTSSHHHHHHHHHHHHTC-------C-EEEEETTTCCSHHHH
T ss_pred HHcCChHHHHHHHHHHHHHHHh---cCCCCCeEEEECCCCCcHHHHHHHHHhccCC-------C-cccccCcccccHHHH
Confidence 5689999999999888753100 1122334679999999999999999986532 1 223333333322221
Q ss_pred HHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCCChhhHHHHHhcccC------------------CCCC
Q 047598 258 SKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNEDYSLWVDLKAPLLA------------------AAPN 319 (1112)
Q Consensus 258 ~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~------------------~~~g 319 (1112)
...+. ..+++..+++|.+.......-+.+...... ..+.
T Consensus 78 ---------------------~~~~~--~~~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (238)
T d1in4a2 78 ---------------------AAILT--SLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQP 134 (238)
T ss_dssp ---------------------HHHHH--HCCTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC---------------CC
T ss_pred ---------------------HHHHH--hhccCCchHHHHHHHhhhHHHhhcccceeeeeeeeeecCcccccccccCCCC
Confidence 11111 124456677777755432111111111100 1123
Q ss_pred cEEEEEcCCh-hhhh--hcCCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCchHHHH
Q 047598 320 SKMIITTRHS-HVAS--TMGPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLPLAAK 390 (1112)
Q Consensus 320 s~iivTTR~~-~v~~--~~~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glPlai~ 390 (1112)
..+|.+|... .+.. .......+.++..+.++...++...+...... ..++....|++.++|.+-.+.
T Consensus 135 ~~~I~at~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~l~~i~~~s~gd~R~ai 204 (238)
T d1in4a2 135 FTLVGATTRSGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVE----IEDAAAEMIAKRSRGTPRIAI 204 (238)
T ss_dssp CEEEEEESCGGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCC----BCHHHHHHHHHTSTTCHHHHH
T ss_pred eEEEEecCCCccccccceeeeeEEEEecCCCHHHHHHHHHHhhhhccch----hhHHHHHHHHHhCCCCHHHHH
Confidence 4455555544 3322 12233567899999999999988776543322 223357888999999765443
No 54
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=97.75 E-value=8.6e-05 Score=72.52 Aligned_cols=150 Identities=17% Similarity=0.095 Sum_probs=86.2
Q ss_pred EEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhC
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSISKALLESITRKPCHLNTLNEVQVDLKTAVD 287 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~l~ 287 (1112)
..+.|+|..|+|||.|++++++..... ...+++++. .++...+.+.+... ...+... .++
T Consensus 37 n~l~l~G~~G~GKTHLl~A~~~~~~~~-----~~~~~~~~~------~~~~~~~~~~~~~~-----~~~~~~~----~~~ 96 (213)
T d1l8qa2 37 NPIFIYGSVGTGKTHLLQAAGNEAKKR-----GYRVIYSSA------DDFAQAMVEHLKKG-----TINEFRN----MYK 96 (213)
T ss_dssp SSEEEECSSSSSHHHHHHHHHHHHHHT-----TCCEEEEEH------HHHHHHHHHHHHHT-----CHHHHHH----HHH
T ss_pred CcEEEECCCCCcHHHHHHHHHHHhccC-----ccceEEech------HHHHHHHHHHHHcc-----chhhHHH----HHh
Confidence 447899999999999999999986532 334455543 34444444444321 1222222 222
Q ss_pred CCcEEEEEeCCCCCC-hhhHHHHHhcccC--CCCCcEEEEEcCChh---------hhhhcCCCceeeCCCCChHhHHHHH
Q 047598 288 GKRFLLVLDDVWNED-YSLWVDLKAPLLA--AAPNSKMIITTRHSH---------VASTMGPIKHYNLKRLLDEDCWSIF 355 (1112)
Q Consensus 288 ~kr~LlVlDdv~~~~-~~~~~~l~~~l~~--~~~gs~iivTTR~~~---------v~~~~~~~~~~~l~~L~~~~~~~Lf 355 (1112)
.--+|++||+.... ...|+.....+.+ ...|.+||+|++... +..++.....+.++ +++++-.+++
T Consensus 97 -~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~l~~~~~dL~SRL~~g~~~~i~-p~d~~~~~iL 174 (213)
T d1l8qa2 97 -SVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKII 174 (213)
T ss_dssp -TCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGCTTSCHHHHHHHHTSEEEECC-CCHHHHHHHH
T ss_pred -hccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcchhccccchHHHHHhhCceEEEEC-CCcHHHHHHH
Confidence 24589999997542 2455543222221 235778999998542 23334455677886 5777777788
Q ss_pred HHhHhCCCCCCCchhHHHHHHHHHhhcC
Q 047598 356 IKHAYESRSLKAHQISELFRKKVVGKCG 383 (1112)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~i~~~c~ 383 (1112)
.+++-..+-.-+ +++..-|++++.
T Consensus 175 ~~~a~~rgl~l~----~~v~~yl~~~~~ 198 (213)
T d1l8qa2 175 KEKLKEFNLELR----KEVIDYLLENTK 198 (213)
T ss_dssp HHHHHHTTCCCC----HHHHHHHHHHCS
T ss_pred HHHHHHcCCCCC----HHHHHHHHHhcC
Confidence 777744332222 234455555553
No 55
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=97.70 E-value=8.6e-05 Score=79.10 Aligned_cols=158 Identities=15% Similarity=0.139 Sum_probs=85.0
Q ss_pred ceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcccccc-ccCCCCceeEEE-EeCCCCCHHH
Q 047598 179 AVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLN-AKDFKFDIKAWV-CISDVFDVLS 256 (1112)
Q Consensus 179 ~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~-~~~~~F~~~~wv-~~~~~~~~~~ 256 (1112)
.++||+.++++++..|.. . .-.-+.+||.+|+|||+++..++++.... .+..-.+.++|. +++.-..
T Consensus 23 ~~~gr~~ei~~~~~~L~r-~-------~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l~a--- 91 (387)
T d1qvra2 23 PVIGRDEEIRRVIQILLR-R-------TKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLA--- 91 (387)
T ss_dssp CCCSCHHHHHHHHHHHHC-S-------SCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC--------
T ss_pred CCcCcHHHHHHHHHHHhc-C-------CCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHhhhhc---
Confidence 378999999999999976 1 11234678999999999886665542111 011334455554 3322110
Q ss_pred HHHHHHHHhcCCCCCCCChHHHHHHHHHHh-C-CCcEEEEEeCCCCCC-------hhhHHHHHhcccCCCCCcEEEEEcC
Q 047598 257 ISKALLESITRKPCHLNTLNEVQVDLKTAV-D-GKRFLLVLDDVWNED-------YSLWVDLKAPLLAAAPNSKMIITTR 327 (1112)
Q Consensus 257 ~~~~il~~l~~~~~~~~~~~~~~~~l~~~l-~-~kr~LlVlDdv~~~~-------~~~~~~l~~~l~~~~~gs~iivTTR 327 (1112)
.. ......++....+...+ . ..+++|++|++...- ..+...+..|.... ..-++|.+|.
T Consensus 92 -------g~----~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~r-g~~~~I~~tT 159 (387)
T d1qvra2 92 -------GA----KYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALAR-GELRLIGATT 159 (387)
T ss_dssp -----------------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHHT-TCCCEEEEEC
T ss_pred -------cc----CcchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCCCcccHHHHHHHHHhC-CCcceeeecC
Confidence 00 01124444444444433 3 347999999995420 01222233333322 2346777776
Q ss_pred Chhhhhh------cCCCceeeCCCCChHhHHHHHHHhH
Q 047598 328 HSHVAST------MGPIKHYNLKRLLDEDCWSIFIKHA 359 (1112)
Q Consensus 328 ~~~v~~~------~~~~~~~~l~~L~~~~~~~Lf~~~~ 359 (1112)
..+.... ......+.+++.+.+++..++....
T Consensus 160 ~~ey~~~e~d~al~rrF~~v~v~ep~~~~~~~il~~~~ 197 (387)
T d1qvra2 160 LDEYREIEKDPALERRFQPVYVDEPTVEETISILRGLK 197 (387)
T ss_dssp HHHHHHHTTCTTTCSCCCCEEECCCCHHHHHHHHHHHH
T ss_pred HHHHHHhcccHHHHHhcccccCCCCcHHHHHHHHHHHH
Confidence 5544321 1134678999999999999987654
No 56
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=97.67 E-value=0.00015 Score=72.54 Aligned_cols=180 Identities=16% Similarity=0.103 Sum_probs=94.4
Q ss_pred cceecchhhHHHHHHHH---hcCCC-CCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCC
Q 047598 178 RAVYGRDKDKARILKMV---LSTDE-KTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFD 253 (1112)
Q Consensus 178 ~~~vGr~~~~~~l~~~L---~~~~~-~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~ 253 (1112)
..++|.++.+++|.+.+ ..+.. ...+....+-|.++|++|+|||++|+.+++..... | +.+..+
T Consensus 9 ~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~-----~---~~i~~~---- 76 (247)
T d1ixza_ 9 KDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVP-----F---ITASGS---- 76 (247)
T ss_dssp GGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCC-----E---EEEEHH----
T ss_pred HHHccHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCC-----E---EEEEhH----
Confidence 46889998877765533 21000 00012233467899999999999999999865322 1 222221
Q ss_pred HHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCC-------C---hh----hHHHHHhcccCCC--
Q 047598 254 VLSISKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNE-------D---YS----LWVDLKAPLLAAA-- 317 (1112)
Q Consensus 254 ~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~-------~---~~----~~~~l~~~l~~~~-- 317 (1112)
++ +.. . .......+...+...-+..+++|++||++.. . .. ....+...+....
T Consensus 77 --~l----~~~----~-~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~ 145 (247)
T d1ixza_ 77 --DF----VEM----F-VGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKD 145 (247)
T ss_dssp --HH----HHS----C-TTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTT
T ss_pred --Hh----hhc----c-ccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCC
Confidence 11 110 0 0011122222233333567899999998521 0 00 1122222222222
Q ss_pred CCcEEEEEcCChhhhh-hc----CCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCc
Q 047598 318 PNSKMIITTRHSHVAS-TM----GPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGL 385 (1112)
Q Consensus 318 ~gs~iivTTR~~~v~~-~~----~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~gl 385 (1112)
.+.-||-||...+... .+ .-.+.+.+.+.+.++-.++|+........ ..+.. ...+++.|.|.
T Consensus 146 ~~vivi~tTn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~-~~~~~----~~~la~~t~g~ 213 (247)
T d1ixza_ 146 TAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPL-AEDVD----LALLAKRTPGF 213 (247)
T ss_dssp CCEEEEEEESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCB-CTTCC----HHHHHHTCTTC
T ss_pred CCEEEEEeCCCccccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCC-ccccC----HHHHHHHCCCC
Confidence 2323334676544322 12 13358899999999999999887754332 22222 25577778775
No 57
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.57 E-value=1.6e-06 Score=81.44 Aligned_cols=43 Identities=19% Similarity=0.179 Sum_probs=19.7
Q ss_pred ccCCcccEEEeccccccccc---ccccCCCcCcEEEcccccccccc
Q 047598 589 PKFKRLRVLSLQRYYIGELL---VSFEDLKLLRYLNLADTMIRTLP 631 (1112)
Q Consensus 589 ~~~~~L~~L~L~~~~~~~lp---~~~~~l~~Lr~L~Ls~n~i~~lp 631 (1112)
..++.|++|+|++|.++.++ ..+..+++|++|+|++|.|+.++
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~ 107 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSER 107 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGG
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccch
Confidence 34445555555555544332 22344445555555555444443
No 58
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.57 E-value=0.00046 Score=69.67 Aligned_cols=179 Identities=17% Similarity=0.119 Sum_probs=98.3
Q ss_pred ceecchhhHHHHHHHHh----cCCC-CCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCC
Q 047598 179 AVYGRDKDKARILKMVL----STDE-KTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFD 253 (1112)
Q Consensus 179 ~~vGr~~~~~~l~~~L~----~~~~-~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~ 253 (1112)
.++|.+..+++|.+.+. .++. ...+-...+-+-++|++|+|||++|+++++..... | +.++.+.
T Consensus 5 dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~-----~---~~i~~~~--- 73 (258)
T d1e32a2 5 DVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF-----F---FLINGPE--- 73 (258)
T ss_dssp GCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCE-----E---EEECHHH---
T ss_pred hhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCCe-----E---EEEEchh---
Confidence 57899999888887642 1000 00011234557899999999999999999865321 2 1222111
Q ss_pred HHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCCC-------hhhHH----HHHhccc--CCCCCc
Q 047598 254 VLSISKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNED-------YSLWV----DLKAPLL--AAAPNS 320 (1112)
Q Consensus 254 ~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~-------~~~~~----~l~~~l~--~~~~gs 320 (1112)
+.... .......+...+...-..++++|++||++... ..... .+..... ....+.
T Consensus 74 -----------l~~~~-~g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~v 141 (258)
T d1e32a2 74 -----------IMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHV 141 (258)
T ss_dssp -----------HTTSC-TTHHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCE
T ss_pred -----------hcccc-cccHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccccCCc
Confidence 10000 11112222223333345678999999997521 01111 1111112 222344
Q ss_pred EEEEEcCChhhhhh-c----CCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCc
Q 047598 321 KMIITTRHSHVAST-M----GPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGL 385 (1112)
Q Consensus 321 ~iivTTR~~~v~~~-~----~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~gl 385 (1112)
-||.||........ + .-.+.+.+...+.++-.++|.....+.. ...+.. ..+|++.+.|.
T Consensus 142 lvi~tTn~~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~-~~~~~~----~~~la~~t~G~ 206 (258)
T d1e32a2 142 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMK-LADDVD----LEQVANETHGH 206 (258)
T ss_dssp EEEEEESCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSC-BCTTCC----HHHHHHHCTTC
T ss_pred cEEEeCCCccccchhhhhcccccceeECCCCCHHHHHHHhhhhccCcc-cccccc----hhhhhhcccCC
Confidence 55668877644321 1 2346889999999999999987663322 122222 25688888875
No 59
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.45 E-value=6.2e-06 Score=77.35 Aligned_cols=99 Identities=21% Similarity=0.178 Sum_probs=70.9
Q ss_pred EEecccccccccccccCCCcCcEEEcccccccccc---ccccCCCCCcEEeecCCCCCcccCc-cccCCccccEEeecCC
Q 047598 597 LSLQRYYIGELLVSFEDLKLLRYLNLADTMIRTLP---ESTNSLLNLEILILRNCSRLKKLPS-KMRNLINLHHLDIKGA 672 (1112)
Q Consensus 597 L~L~~~~~~~lp~~~~~l~~Lr~L~Ls~n~i~~lp---~~i~~L~~L~~L~L~~~~~l~~lp~-~i~~L~~L~~L~L~~~ 672 (1112)
++...+....++..+..+++|++|+|++|+|+.++ ..+..+++|++|+|++| .+..++. ...+..+|+.|++++|
T Consensus 47 l~~~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N-~i~~l~~l~~l~~~~L~~L~L~~N 125 (162)
T d1koha1 47 LNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGN-ELKSERELDKIKGLKLEELWLDGN 125 (162)
T ss_dssp TTSHHHHHHHHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTS-CCCCGGGHHHHTTCCCSSCCCTTS
T ss_pred cchhhhHhhhhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccC-ccccchhhhhhhccccceeecCCC
Confidence 33333333444444567899999999999998764 44678999999999998 7887776 2334567999999999
Q ss_pred CccccCCC-------CCCCCCCCCccCeeee
Q 047598 673 NLLREMPL-------GMKELKNLRTLSNFIV 696 (1112)
Q Consensus 673 ~~l~~lp~-------~i~~l~~L~~L~~~~~ 696 (1112)
.+...... .+..+++|+.|+...+
T Consensus 126 pl~~~~~~~~~y~~~i~~~~P~L~~LDg~~v 156 (162)
T d1koha1 126 SLSDTFRDQSTYISAIRERFPKLLRLDGHEL 156 (162)
T ss_dssp TTSSSSSSHHHHHHHHHTTSTTCCEETTEEC
T ss_pred CcCcCcccchhHHHHHHHHCCCCCEECcCCC
Confidence 85433221 1567899999986543
No 60
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.28 E-value=0.00096 Score=67.42 Aligned_cols=180 Identities=14% Similarity=0.110 Sum_probs=93.6
Q ss_pred ceecchhhHHHHHHHHh----cCCC-CCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCC
Q 047598 179 AVYGRDKDKARILKMVL----STDE-KTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFD 253 (1112)
Q Consensus 179 ~~vGr~~~~~~l~~~L~----~~~~-~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~ 253 (1112)
+++|.++.+++|.+.+. .++. ...+-...+-|-++|++|.|||++|+++++..... | +.++
T Consensus 8 di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~-----~-----~~~~---- 73 (265)
T d1r7ra3 8 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN-----F-----ISIK---- 73 (265)
T ss_dssp SCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCE-----E-----EEEC----
T ss_pred HhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHhCCc-----E-----EEEE----
Confidence 46677776666665442 1000 00022334567799999999999999999875422 2 2222
Q ss_pred HHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhCCCcEEEEEeCCCCCCh----------hh----HHHHHhcccC--CC
Q 047598 254 VLSISKALLESITRKPCHLNTLNEVQVDLKTAVDGKRFLLVLDDVWNEDY----------SL----WVDLKAPLLA--AA 317 (1112)
Q Consensus 254 ~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~----------~~----~~~l~~~l~~--~~ 317 (1112)
...+ . ... .......+...+...-...+++|++||++..-. .. ...+...+.. ..
T Consensus 74 ~~~l----~----~~~-~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~ 144 (265)
T d1r7ra3 74 GPEL----L----TMW-FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK 144 (265)
T ss_dssp HHHH----H----TSC-TTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC-----
T ss_pred HHHh----h----hcc-ccchHHHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCC
Confidence 1111 0 111 111222233333334446789999999963210 01 1122222321 12
Q ss_pred CCcEEEEEcCChhhhh-hc----CCCceeeCCCCChHhHHHHHHHhHhCCCCCCCchhHHHHHHHHHhhcCCch
Q 047598 318 PNSKMIITTRHSHVAS-TM----GPIKHYNLKRLLDEDCWSIFIKHAYESRSLKAHQISELFRKKVVGKCGGLP 386 (1112)
Q Consensus 318 ~gs~iivTTR~~~v~~-~~----~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~~i~~~c~glP 386 (1112)
.+--||.||...+... .+ .-...+++...+.++-.++|..+.... ....+..+ .+|++++.|.-
T Consensus 145 ~~v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~-~~~~~~~l----~~la~~t~g~s 213 (265)
T d1r7ra3 145 KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKS-PVAKDVDL----EFLAKMTNGFS 213 (265)
T ss_dssp -CCEEEECCBSCTTTSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC-----CCCC----HHHHHHHCSSC
T ss_pred CCEEEEEeCCCchhCCHHHhCCCCccEEEEecchHHHHHHHHHHHHhccC-CchhhhhH----HHHHhcCCCCC
Confidence 3445677777654321 11 234678999999999999998765322 11122222 55677777754
No 61
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=97.06 E-value=0.00083 Score=66.96 Aligned_cols=55 Identities=18% Similarity=0.199 Sum_probs=35.8
Q ss_pred cceecchhhHHHHHHHHhcCC--CCCCCCCCeEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 178 RAVYGRDKDKARILKMVLSTD--EKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 178 ~~~vGr~~~~~~l~~~L~~~~--~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
..++|....++.+++.....- .......+.+-|-++|++|+|||++|+++++...
T Consensus 9 ~~~i~~~~~i~~i~~~~~~~~~~~~~~~~~p~~~vLL~GppGtGKT~la~alA~~~~ 65 (246)
T d1d2na_ 9 NGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESN 65 (246)
T ss_dssp TCCCCCSHHHHHHHHHHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHHT
T ss_pred cCCcCcCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEECcCCCCHHHHHHHHhhccc
Confidence 357787776666655443100 0000123466788999999999999999998653
No 62
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.87 E-value=0.0032 Score=60.08 Aligned_cols=122 Identities=11% Similarity=0.009 Sum_probs=73.0
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeC-CCCCHHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCIS-DVFDVLSISKALLESITRKPCHLNTLNEVQVDLKT 284 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~-~~~~~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~ 284 (1112)
...-+.++|.+|+||||+|..+.+..... ...|.|. +++... ....+.++ +++.+.+....
T Consensus 14 ~~~~~l~~G~~g~gk~~~a~~l~~~i~~~-~~~h~D~-~~i~~~~~~I~Id~I-R~i~~~~~~~~--------------- 75 (198)
T d2gnoa2 14 EGISILINGEDLSYPREVSLELPEYVEKF-PPKASDV-LEIDPEGENIGIDDI-RTIKDFLNYSP--------------- 75 (198)
T ss_dssp SSEEEEEECSSSSHHHHHHHHHHHHHHTS-CCCTTTE-EEECCSSSCBCHHHH-HHHHHHHTSCC---------------
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHHhcc-ccCCCCE-EEEeCCcCCCCHHHH-HHHHHHHhhCc---------------
Confidence 46789999999999999999888754322 1133333 333221 12223322 33444333221
Q ss_pred HhCCCcEEEEEeCCCCCChhhHHHHHhcccCCCCCcEEEEEcCChh-hhhhc-CCCceeeCCCC
Q 047598 285 AVDGKRFLLVLDDVWNEDYSLWVDLKAPLLAAAPNSKMIITTRHSH-VASTM-GPIKHYNLKRL 346 (1112)
Q Consensus 285 ~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivTTR~~~-v~~~~-~~~~~~~l~~L 346 (1112)
..+++=++|+|+++......+..+...+-....++.+|++|.+.. +.... +....+.+.+.
T Consensus 76 -~~~~~KviIId~ad~l~~~aqNaLLK~LEEPp~~t~fiLit~~~~~ll~TI~SRC~~i~~~~p 138 (198)
T d2gnoa2 76 -ELYTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNVP 138 (198)
T ss_dssp -SSSSSEEEEETTGGGBCHHHHHHTHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCC
T ss_pred -ccCCCEEEEEeCccccchhhhhHHHHHHhCCCCCceeeeccCChhhCHHHHhcceEEEeCCCc
Confidence 124556899999998888888888877766666778777776643 33322 22345666544
No 63
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=96.46 E-value=0.0017 Score=67.28 Aligned_cols=120 Identities=13% Similarity=0.151 Sum_probs=66.6
Q ss_pred ceecchhhHHHHHHHHhcCCC-CCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHH
Q 047598 179 AVYGRDKDKARILKMVLSTDE-KTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSI 257 (1112)
Q Consensus 179 ~~vGr~~~~~~l~~~L~~~~~-~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~ 257 (1112)
.++|.+..++.+...+..... -...+....++.++|+.|+|||.||+.+.+-. +...+-++++.-.+...
T Consensus 23 ~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l--------~~~~i~~d~s~~~~~~~- 93 (315)
T d1r6bx3 23 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL--------GIELLRFDMSEYMERHT- 93 (315)
T ss_dssp TSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHH--------TCEEEEEEGGGCSSSSC-
T ss_pred eecChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHHHHHHHhhc--------cCCeeEeccccccchhh-
Confidence 577888888888776631000 00123456788999999999999999998743 22233344332211000
Q ss_pred HHHHHHHhcCCCCCCCChH---HHHHHHHHHhCCCcEEEEEeCCCCCChhhHHHHHhccc
Q 047598 258 SKALLESITRKPCHLNTLN---EVQVDLKTAVDGKRFLLVLDDVWNEDYSLWVDLKAPLL 314 (1112)
Q Consensus 258 ~~~il~~l~~~~~~~~~~~---~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~ 314 (1112)
...+-+........+ .+...+ -+....+++||+++..+.+.|..+...+.
T Consensus 94 ----~~~l~g~~~gy~g~~~~~~l~~~~---~~~~~~vvl~DeieKa~~~V~~~lLqild 146 (315)
T d1r6bx3 94 ----VSRLIGAPPGYVGFDQGGLLTDAV---IKHPHAVLLLDEIEKAHPDVFNILLQVMD 146 (315)
T ss_dssp ----CSSSCCCCSCSHHHHHTTHHHHHH---HHCSSEEEEEETGGGSCHHHHHHHHHHHH
T ss_pred ----hhhhcccCCCccccccCChhhHHH---HhCccchhhhcccccccchHhhhhHHhhc
Confidence 001111111100001 112222 23557799999999888888887776653
No 64
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=96.29 E-value=0.0019 Score=66.69 Aligned_cols=124 Identities=15% Similarity=0.179 Sum_probs=63.6
Q ss_pred ceecchhhHHHHHHHHhcCCC-CCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHH
Q 047598 179 AVYGRDKDKARILKMVLSTDE-KTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSI 257 (1112)
Q Consensus 179 ~~vGr~~~~~~l~~~L~~~~~-~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~ 257 (1112)
.++|.+..++.|...+..... -........++.++|+.|+|||.+|+.+.+..- +.-...+-+..+.-.+...+
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~-----~~~~~~~~~~~~~~~~~~~~ 98 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLF-----DTEEAMIRIDMTEYMEKHAV 98 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHH-----SSGGGEEEECTTTCCSSGGG
T ss_pred eEeCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEECCCcchHHHHHHHHHHHhc-----CCCcceEEEeccccccchhh
Confidence 466778777777665532100 001233456888999999999999998887531 11112222333322221110
Q ss_pred HHHHHHHhcCCCC--CCCChHHHHHHHHHHhCCCcEEEEEeCCCCCChhhHHHHHhccc
Q 047598 258 SKALLESITRKPC--HLNTLNEVQVDLKTAVDGKRFLLVLDDVWNEDYSLWVDLKAPLL 314 (1112)
Q Consensus 258 ~~~il~~l~~~~~--~~~~~~~~~~~l~~~l~~kr~LlVlDdv~~~~~~~~~~l~~~l~ 314 (1112)
..+ ++.... .......+...++ +....+++||+++..+...+..+...+.
T Consensus 99 -~~L---~g~~~gyvG~~~~~~l~~~~~---~~p~~Vvl~DEieK~~~~v~~~ll~~l~ 150 (315)
T d1qvra3 99 -SRL---IGAPPGYVGYEEGGQLTEAVR---RRPYSVILFDEIEKAHPDVFNILLQILD 150 (315)
T ss_dssp -GGC-----------------CHHHHHH---HCSSEEEEESSGGGSCHHHHHHHHHHHT
T ss_pred -hhh---cCCCCCCcCcccCChHHHHHH---hCCCcEEEEehHhhcCHHHHHHHHHHhc
Confidence 000 011100 0011112333333 2457899999999888777777666553
No 65
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=95.82 E-value=0.0019 Score=59.02 Aligned_cols=23 Identities=39% Similarity=0.653 Sum_probs=20.5
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
++|.|+|++|+||||+|+++...
T Consensus 3 klIii~G~pGsGKTTla~~L~~~ 25 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAK 25 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHh
Confidence 58899999999999999998654
No 66
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=95.70 E-value=0.0023 Score=60.99 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=23.2
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-.+.|+|.|++|+||||||+.+.+..
T Consensus 6 ~~K~I~i~G~~GsGKTTla~~La~~~ 31 (192)
T d1lw7a2 6 FAKTVAILGGESSGKSVLVNKLAAVF 31 (192)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHHHT
T ss_pred cceEEEEECCCCCCHHHHHHHHHHHh
Confidence 36899999999999999999998754
No 67
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=95.63 E-value=0.0025 Score=59.72 Aligned_cols=24 Identities=33% Similarity=0.501 Sum_probs=21.7
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
++|.|.|++|+||||+|+++....
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~ 26 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQL 26 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHc
Confidence 689999999999999999998653
No 68
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=95.62 E-value=0.0019 Score=60.12 Aligned_cols=24 Identities=38% Similarity=0.580 Sum_probs=21.3
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
+.|.|+|++|+||||+|+.+.+..
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L 26 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQL 26 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHh
Confidence 368888999999999999999864
No 69
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=95.52 E-value=0.0036 Score=59.07 Aligned_cols=27 Identities=22% Similarity=0.217 Sum_probs=23.6
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
.-.+|.|+|++|+||||+|+++.+...
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~~L~ 31 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQVTLN 31 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHh
Confidence 457899999999999999999987754
No 70
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=95.49 E-value=0.0027 Score=59.27 Aligned_cols=26 Identities=23% Similarity=0.420 Sum_probs=22.5
Q ss_pred eEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
..|++|+|..|+|||||++++.+...
T Consensus 2 ~Pvi~itG~~GSGKTTL~~~L~~~l~ 27 (170)
T d1np6a_ 2 IPLLAFAAWSGTGKTTLLKKLIPALC 27 (170)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 35899999999999999999987543
No 71
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.40 E-value=0.015 Score=53.95 Aligned_cols=26 Identities=35% Similarity=0.508 Sum_probs=22.5
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
+...+|.++|++|+||||+|+++...
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~~ 37 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLVS 37 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGG
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 45679999999999999999998754
No 72
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.37 E-value=0.0031 Score=58.50 Aligned_cols=61 Identities=18% Similarity=0.126 Sum_probs=26.4
Q ss_pred ccCCCcCcEEEccccccc-----cccccccCCCCCcEEeecCCCCCcc-----cCccccCCccccEEeecCC
Q 047598 611 FEDLKLLRYLNLADTMIR-----TLPESTNSLLNLEILILRNCSRLKK-----LPSKMRNLINLHHLDIKGA 672 (1112)
Q Consensus 611 ~~~l~~Lr~L~Ls~n~i~-----~lp~~i~~L~~L~~L~L~~~~~l~~-----lp~~i~~L~~L~~L~L~~~ 672 (1112)
+...++|++|+|++|.+. .+...+...+.|++|+|++| .++. +-..+...+.|++|++++|
T Consensus 40 L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n-~i~~~g~~~l~~aL~~n~sL~~L~l~~n 110 (167)
T d1pgva_ 40 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESN-FLTPELLARLLRSTLVTQSIVEFKADNQ 110 (167)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSS-BCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehh-hcchHHHHHHHHHHHhCCcCCEEECCCC
Confidence 344444555555555443 12222333445555555554 2221 1222334445555555544
No 73
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.36 E-value=0.0071 Score=57.85 Aligned_cols=42 Identities=29% Similarity=0.313 Sum_probs=30.1
Q ss_pred hHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 186 DKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 186 ~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
.++.|.+..... ...+.-+|+|.|.+|+||||||+.+.....
T Consensus 6 ~~~~~~~~~~~~-----~~~~~~iIgI~G~~GSGKSTla~~L~~~l~ 47 (198)
T d1rz3a_ 6 RIDFLCKTILAI-----KTAGRLVLGIDGLSRSGKTTLANQLSQTLR 47 (198)
T ss_dssp HHHHHHHHHHTS-----CCSSSEEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-----cCCCCEEEEEECCCCCCHHHHHHHHHHHhc
Confidence 345555555431 234567899999999999999999987543
No 74
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.25 E-value=0.02 Score=56.80 Aligned_cols=86 Identities=20% Similarity=0.143 Sum_probs=59.6
Q ss_pred CCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHHHHHHHHHhcCCCC-----CCCChHHH
Q 047598 204 DANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSISKALLESITRKPC-----HLNTLNEV 278 (1112)
Q Consensus 204 ~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~~~~il~~l~~~~~-----~~~~~~~~ 278 (1112)
-+.-+++-|+|.+|+||||+|.+++...... -..++|+.....++... +++++.... .....++.
T Consensus 57 ~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~-----g~~~vyIDtE~~~~~e~-----a~~~GvD~d~il~~~~~~~E~~ 126 (269)
T d1mo6a1 57 LPRGRVIEIYGPESSGKTTVALHAVANAQAA-----GGVAAFIDAEHALDPDY-----AKKLGVDTDSLLVSQPDTGEQA 126 (269)
T ss_dssp BCSSSEEEEECSSSSSHHHHHHHHHHHHHHT-----TCEEEEEESSCCCCHHH-----HHHHTCCGGGCEEECCSSHHHH
T ss_pred cccceeEEEecCCCcHHHHHHHHHHHHHhcC-----CCEEEEEECCccCCHHH-----HHHhCCCHHHeEEecCCCHHHH
Confidence 3456799999999999999998887765433 34689999999988653 556665432 23455665
Q ss_pred HHHHHHHh-CCCcEEEEEeCCC
Q 047598 279 QVDLKTAV-DGKRFLLVLDDVW 299 (1112)
Q Consensus 279 ~~~l~~~l-~~kr~LlVlDdv~ 299 (1112)
.+.+.... +++.-|||+|.+-
T Consensus 127 ~~~~~~l~~~~~~~liIiDSi~ 148 (269)
T d1mo6a1 127 LEIADMLIRSGALDIVVIDSVA 148 (269)
T ss_dssp HHHHHHHHHTTCEEEEEEECST
T ss_pred HHHHHHHHhcCCCCEEEEeccc
Confidence 55554444 3456788999883
No 75
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=95.22 E-value=0.022 Score=53.96 Aligned_cols=59 Identities=20% Similarity=0.174 Sum_probs=39.2
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCH--HHHHHHHHHHhcCCC
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDV--LSISKALLESITRKP 269 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~--~~~~~~il~~l~~~~ 269 (1112)
....||.++|+.|+||||.+.+++.....+ ...+.+-..+.+.. .+-++...+.++...
T Consensus 7 ~~p~vi~lvGptGvGKTTTiAKLA~~~~~~------g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~ 67 (211)
T d2qy9a2 7 KAPFVILMVGVNGVGKTTTIGKLARQFEQQ------GKSVMLAAGDTFRAAAVEQLQVWGQRNNIPV 67 (211)
T ss_dssp CTTEEEEEECCTTSCHHHHHHHHHHHHHTT------TCCEEEECCCTTCHHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHC------CCcEEEEecccccccchhhhhhhhhhcCCcc
Confidence 457899999999999998877777654321 23455555566655 455566666666543
No 76
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=95.15 E-value=0.0038 Score=58.32 Aligned_cols=23 Identities=43% Similarity=0.657 Sum_probs=20.3
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.|.|.|++|+||||+|+.+.+..
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l 28 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKS 28 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 46799999999999999998764
No 77
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.13 E-value=0.005 Score=57.03 Aligned_cols=111 Identities=18% Similarity=0.103 Sum_probs=58.8
Q ss_pred cCCCcceeccccccCCcccccccccccccccccCCcccEEEeccccccc-----ccccccCCCcCcEEEcccccccc---
Q 047598 558 QTENLRTFLPIRIRGGTICSYITGIVLSDLLPKFKRLRVLSLQRYYIGE-----LLVSFEDLKLLRYLNLADTMIRT--- 629 (1112)
Q Consensus 558 ~~~~lr~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~-----lp~~~~~l~~Lr~L~Ls~n~i~~--- 629 (1112)
+.++|+.|.+.+....... ........+...+.|+.|+|++|.++. +...+...+.|++|+|++|.+..
T Consensus 13 n~~~L~~L~L~~~~~i~~~---~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~ 89 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKE---RIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 89 (167)
T ss_dssp TCSSCCEEECTTCCSSCHH---HHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred CCCCCcEEEeCCCCCCCHH---HHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHH
Confidence 3466777776543211000 001122335556677777777776632 22344556677777777776652
Q ss_pred --ccccccCCCCCcEEeecCCCCCcc--------cCccccCCccccEEeecCC
Q 047598 630 --LPESTNSLLNLEILILRNCSRLKK--------LPSKMRNLINLHHLDIKGA 672 (1112)
Q Consensus 630 --lp~~i~~L~~L~~L~L~~~~~l~~--------lp~~i~~L~~L~~L~L~~~ 672 (1112)
+-..+...+.|++|++++| .... +...+..-+.|+.|+++.+
T Consensus 90 ~~l~~aL~~n~sL~~L~l~~n-~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 90 ARLLRSTLVTQSIVEFKADNQ-RQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHHHHHTTTTCCCSEEECCCC-SSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHHHHHhCCcCCEEECCCC-cCCCccHHHHHHHHHHHHhCCCccEeeCcCC
Confidence 3344566677777777765 2222 2222334455666655443
No 78
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.13 E-value=0.0055 Score=58.68 Aligned_cols=28 Identities=29% Similarity=0.406 Sum_probs=24.9
Q ss_pred CCCeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 204 DANFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 204 ~~~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+...||.|.|++|+||||+|+.+++..
T Consensus 5 ~~~~~iI~i~GppGSGKsT~a~~La~~~ 32 (196)
T d1ukza_ 5 PDQVSVIFVLGGPGAGKGTQCEKLVKDY 32 (196)
T ss_dssp TTTCEEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCCcEEEEECCCCCCHHHHHHHHHHHh
Confidence 3568899999999999999999998865
No 79
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=95.02 E-value=0.0062 Score=58.18 Aligned_cols=27 Identities=26% Similarity=0.361 Sum_probs=23.9
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
+...+|.|+|++|+||||+|+.+++..
T Consensus 4 ~kp~iI~i~G~pGSGKsT~a~~La~~~ 30 (194)
T d1qf9a_ 4 SKPNVVFVLGGPGSGKGTQCANIVRDF 30 (194)
T ss_dssp CCCEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 456899999999999999999998754
No 80
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=94.99 E-value=0.0064 Score=56.63 Aligned_cols=27 Identities=26% Similarity=0.525 Sum_probs=23.9
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
...+++.|.|++|+||||+|+.+....
T Consensus 4 ~~~~iivl~G~~GsGKsT~a~~La~~l 30 (171)
T d1knqa_ 4 HDHHIYVLMGVSGSGKSAVASEVAHQL 30 (171)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 457899999999999999999998764
No 81
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=94.98 E-value=0.0047 Score=56.90 Aligned_cols=23 Identities=43% Similarity=0.693 Sum_probs=20.4
Q ss_pred EEEEccCCCcHHHHHHHHhcccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
|.|+||+|+||||+|+.+++...
T Consensus 3 I~liG~~GsGKsTi~k~La~~l~ 25 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKDLD 25 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 67789999999999999998754
No 82
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=94.90 E-value=0.018 Score=54.58 Aligned_cols=58 Identities=17% Similarity=0.020 Sum_probs=40.1
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCC-CCCHHHHHHHHHHHhcCC
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISD-VFDVLSISKALLESITRK 268 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~-~~~~~~~~~~il~~l~~~ 268 (1112)
+.+|+.++|+.|+||||.+.+++.....+ + ..+..+++.. .....+-++...+.++..
T Consensus 5 ~~~vi~lvGptGvGKTTTiaKLA~~~~~~---g--~kV~lit~Dt~R~gA~eQL~~~a~~l~i~ 63 (207)
T d1okkd2 5 KGRVVLVVGVNGVGKTTTIAKLGRYYQNL---G--KKVMFCAGDTFRAAGGTQLSEWGKRLSIP 63 (207)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHHTT---T--CCEEEECCCCSSTTHHHHHHHHHHHHTCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHC---C--CcEEEEEeccccccchhhHhhcccccCce
Confidence 45799999999999998877777655422 2 3566777653 345566667777776654
No 83
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=94.90 E-value=0.0071 Score=56.57 Aligned_cols=25 Identities=28% Similarity=0.400 Sum_probs=22.4
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-++|.|.|++|+||||+|+.+.+..
T Consensus 4 g~iI~l~G~~GsGKSTia~~La~~l 28 (176)
T d1zp6a1 4 GNILLLSGHPGSGKSTIAEALANLP 28 (176)
T ss_dssp TEEEEEEECTTSCHHHHHHHHHTCS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 4799999999999999999998754
No 84
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=94.90 E-value=0.016 Score=57.43 Aligned_cols=83 Identities=19% Similarity=0.159 Sum_probs=54.2
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHHHHHHHHHhcCCCC-----CCCChHHHHH
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSISKALLESITRKPC-----HLNTLNEVQV 280 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~~~~il~~l~~~~~-----~~~~~~~~~~ 280 (1112)
.-+++-|+|.+|+||||+|.+++...... -..++|++....++.. .++.++.... .....++..+
T Consensus 53 ~g~itei~G~~gsGKTtl~l~~~~~~q~~-----g~~~vyidtE~~~~~~-----~a~~~Gvd~d~v~~~~~~~~E~~~~ 122 (263)
T d1u94a1 53 MGRIVEIYGPESSGKTTLTLQVIAAAQRE-----GKTCAFIDAEHALDPI-----YARKLGVDIDNLLCSQPDTGEQALE 122 (263)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHHHHHT-----TCCEEEEESSCCCCHH-----HHHHTTCCGGGCEEECCSSHHHHHH
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHHHcC-----CCEEEEEccccccCHH-----HHHHhCCCHHHEEEecCCCHHHHHH
Confidence 44699999999999999998888776533 2457899999888764 3566665431 2234444444
Q ss_pred HHHHHhC-CCcEEEEEeCC
Q 047598 281 DLKTAVD-GKRFLLVLDDV 298 (1112)
Q Consensus 281 ~l~~~l~-~kr~LlVlDdv 298 (1112)
.+....+ ++.-|||+|-+
T Consensus 123 ~i~~l~~~~~~~liViDSi 141 (263)
T d1u94a1 123 ICDALARSGAVDVIVVDSV 141 (263)
T ss_dssp HHHHHHHHTCCSEEEEECG
T ss_pred HHHHHHhcCCCCEEEEECc
Confidence 4433332 23346777776
No 85
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=94.89 E-value=0.024 Score=56.28 Aligned_cols=84 Identities=18% Similarity=0.140 Sum_probs=58.5
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHHHHHHHHHhcCCCC-----CCCChHHHH
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSISKALLESITRKPC-----HLNTLNEVQ 279 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~~~~il~~l~~~~~-----~~~~~~~~~ 279 (1112)
+.-+++-|+|.+|+||||+|.+++....-. + ..++|+.....++.. +++.++.... ...+.++..
T Consensus 55 p~g~itei~G~~~sGKT~l~l~~~~~aqk~---g--~~v~yiDtE~~~~~~-----~a~~~Gvd~d~i~~~~~~~~E~~~ 124 (268)
T d1xp8a1 55 PRGRITEIYGPESGGKTTLALAIVAQAQKA---G--GTCAFIDAEHALDPV-----YARALGVNTDELLVSQPDNGEQAL 124 (268)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHHHHHHT---T--CCEEEEESSCCCCHH-----HHHHTTCCGGGCEEECCSSHHHHH
T ss_pred cCceEEEEecCCccchHHHHHHHHHHHHhC---C--CEEEEEECCccCCHH-----HHHHhCCCchhEEEEcCCCHHHHH
Confidence 345699999999999999998888765422 2 458899999988874 5677766542 234555555
Q ss_pred HHHHHHhCC-CcEEEEEeCC
Q 047598 280 VDLKTAVDG-KRFLLVLDDV 298 (1112)
Q Consensus 280 ~~l~~~l~~-kr~LlVlDdv 298 (1112)
+.+....+. +.-|||+|-+
T Consensus 125 ~~~~~l~~~~~~~liIiDSi 144 (268)
T d1xp8a1 125 EIMELLVRSGAIDVVVVDSV 144 (268)
T ss_dssp HHHHHHHTTTCCSEEEEECT
T ss_pred HHHHHHHhcCCCcEEEEecc
Confidence 555554433 3557888887
No 86
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=94.86 E-value=0.0056 Score=57.39 Aligned_cols=25 Identities=24% Similarity=0.290 Sum_probs=22.5
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.++|.|.|.+|+||||+|+.+.+..
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l 27 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVL 27 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHc
Confidence 4699999999999999999998864
No 87
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.80 E-value=0.0047 Score=58.54 Aligned_cols=25 Identities=36% Similarity=0.445 Sum_probs=21.9
Q ss_pred EEEEEEccCCCcHHHHHHHHhcccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
+.|.|+|++|+|||||++++.....
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~ 26 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLK 26 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHH
Confidence 4689999999999999999987653
No 88
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.79 E-value=0.0058 Score=56.54 Aligned_cols=25 Identities=32% Similarity=0.345 Sum_probs=22.4
Q ss_pred EEEEEEccCCCcHHHHHHHHhcccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
+|++|+|..|+|||||+.++....+
T Consensus 2 kii~I~G~~gSGKTTli~~l~~~L~ 26 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVAAAV 26 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 5899999999999999999987654
No 89
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.74 E-value=0.0063 Score=56.29 Aligned_cols=23 Identities=30% Similarity=0.573 Sum_probs=19.6
Q ss_pred EEEEccCCCcHHHHHHHHhcccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
|.++||+|+||||+|+.+++...
T Consensus 4 IvliG~~G~GKSTig~~La~~l~ 26 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKALG 26 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 44669999999999999998754
No 90
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=94.65 E-value=0.0064 Score=57.65 Aligned_cols=25 Identities=28% Similarity=0.539 Sum_probs=22.3
Q ss_pred EEEEEEccCCCcHHHHHHHHhcccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
++|+|.|++|+||||+++.+.+...
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~ 26 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLR 26 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 5899999999999999999987653
No 91
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.65 E-value=0.0058 Score=58.37 Aligned_cols=27 Identities=22% Similarity=0.262 Sum_probs=23.1
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
...+|.++|++|+||||+|+.+.....
T Consensus 18 ~g~vI~L~G~pGSGKTTiAk~La~~l~ 44 (195)
T d1x6va3 18 RGCTVWLTGLSGAGKTTVSMALEEYLV 44 (195)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 456888999999999999999987653
No 92
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=94.63 E-value=0.025 Score=55.72 Aligned_cols=46 Identities=22% Similarity=0.198 Sum_probs=35.0
Q ss_pred ceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 179 AVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 179 ~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.|||....+.++.+.+.... ....-|.|.|..|+|||++|+.++..
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a------~~~~pvlI~Ge~GtGK~~~A~~ih~~ 46 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKIS------CAECPVLITGESGVGKEVVARLIHKL 46 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHT------TCCSCEEEECSTTSSHHHHHHHHHHH
T ss_pred CeEecCHHHHHHHHHHHHHh------CCCCCEEEECCCCcCHHHHHHHHHHh
Confidence 37888888888888876521 11224688999999999999999864
No 93
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=94.52 E-value=0.0061 Score=56.71 Aligned_cols=24 Identities=38% Similarity=0.486 Sum_probs=20.7
Q ss_pred EEEEEccCCCcHHHHHHHHhcccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
.|.++|++|+||||+|+.+++...
T Consensus 4 ~Iil~G~~GsGKSTia~~LA~~Lg 27 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVGRELARALG 27 (170)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHHT
T ss_pred CEEEECCCCCCHHHHHHHHHHHhC
Confidence 466889999999999999998653
No 94
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=94.51 E-value=0.0083 Score=55.97 Aligned_cols=25 Identities=32% Similarity=0.367 Sum_probs=21.7
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.-.|.|.|++|+||||+|+.+.+..
T Consensus 5 ~~~I~i~G~~GsGKTT~~~~La~~l 29 (174)
T d1y63a_ 5 GINILITGTPGTGKTSMAEMIAAEL 29 (174)
T ss_dssp SCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHh
Confidence 4468899999999999999998764
No 95
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.47 E-value=0.0092 Score=57.84 Aligned_cols=26 Identities=23% Similarity=0.367 Sum_probs=22.5
Q ss_pred eEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
..+|.++|.+|+||||+|+++++...
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~l~ 27 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRYLN 27 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 35899999999999999999987543
No 96
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=94.45 E-value=0.024 Score=53.83 Aligned_cols=60 Identities=23% Similarity=0.075 Sum_probs=33.6
Q ss_pred CCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCC-CCHHHHHHHHHHHhcCC
Q 047598 204 DANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDV-FDVLSISKALLESITRK 268 (1112)
Q Consensus 204 ~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~-~~~~~~~~~il~~l~~~ 268 (1112)
.....||.++|+.|+||||.+.+++.....+ . ..+..|++... ....+-++...+.++..
T Consensus 9 ~k~p~vi~lvGptGvGKTTTiAKLA~~~~~~----g-~kV~lit~Dt~R~ga~eQL~~~a~~l~v~ 69 (211)
T d1j8yf2 9 DKIPYVIMLVGVQGTGKATTAGKLAYFYKKK----G-FKVGLVGADVYRPAALEQLQQLGQQIGVP 69 (211)
T ss_dssp SSSSEEEEEECSCCC----HHHHHHHHHHHT----T-CCEEEEECCCSSHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHC----C-CceEEEEeeccccchhHHHHHhccccCcc
Confidence 3467899999999999998876666554322 2 24566666432 22334445555666544
No 97
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=94.37 E-value=0.12 Score=49.98 Aligned_cols=24 Identities=42% Similarity=0.537 Sum_probs=21.4
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
..++|+|..|+|||||++.+..-.
T Consensus 30 e~vaIvG~sGsGKSTLl~ll~gl~ 53 (241)
T d2pmka1 30 EVIGIVGRSGSGKSTLTKLIQRFY 53 (241)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHHhcC
Confidence 489999999999999999987654
No 98
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=94.37 E-value=0.017 Score=58.44 Aligned_cols=44 Identities=16% Similarity=0.270 Sum_probs=30.3
Q ss_pred hHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 186 DKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 186 ~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
...+.++.+..... +....+.|.++|++|+||||||+.+++...
T Consensus 14 ~~~~~~~~~~~~~~---~~~~P~~ilL~GpPGtGKT~la~~la~~~~ 57 (273)
T d1gvnb_ 14 RLNDNLEELIQGKK---AVESPTAFLLGGQPGSGKTSLRSAIFEETQ 57 (273)
T ss_dssp HHHHHHHHHHTTCC---CCSSCEEEEEECCTTSCTHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccc---CCCCCEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 34444444543121 334567788999999999999999998653
No 99
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=94.14 E-value=0.006 Score=62.95 Aligned_cols=54 Identities=22% Similarity=0.337 Sum_probs=35.3
Q ss_pred cceecchhhHHHHHHHHh----cCC--CCCCCCCCeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 178 RAVYGRDKDKARILKMVL----STD--EKTDDDANFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 178 ~~~vGr~~~~~~l~~~L~----~~~--~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
..++|.++.++.+...+. ... .........+-+.++|++|+|||.||+++++..
T Consensus 14 ~~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~ 73 (309)
T d1ofha_ 14 QHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA 73 (309)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHH
T ss_pred CcccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhcc
Confidence 357888888888766541 100 000001134566789999999999999999864
No 100
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.11 E-value=0.049 Score=52.40 Aligned_cols=24 Identities=17% Similarity=0.260 Sum_probs=21.6
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-||+|.|..|+||||+|+.+.+..
T Consensus 3 ~iIgI~G~~gSGKSTla~~L~~~l 26 (213)
T d1uj2a_ 3 FLIGVSGGTASGKSSVCAKIVQLL 26 (213)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHh
Confidence 589999999999999999987764
No 101
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=94.01 E-value=0.035 Score=56.10 Aligned_cols=82 Identities=15% Similarity=0.059 Sum_probs=46.8
Q ss_pred CCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHHHHHHHHHhcC--CCCCCCChHHHHHH
Q 047598 204 DANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSISKALLESITR--KPCHLNTLNEVQVD 281 (1112)
Q Consensus 204 ~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~~~~il~~l~~--~~~~~~~~~~~~~~ 281 (1112)
....-+|+|.|..|+||||+|+.+....... ..-..+.-++...-+-..+.+.. +.+.. ..+..-+.+.+...
T Consensus 77 ~k~P~iIGIaG~sgSGKSTla~~L~~lL~~~---~~~~~v~~Is~D~F~~~~~~l~~--~~~~~~~g~Pes~D~~~L~~~ 151 (308)
T d1sq5a_ 77 QRIPYIISIAGSVAVGKSTTARVLQALLSRW---PEHRRVELITTDGFLHPNQVLKE--RGLMKKKGFPESYDMHRLVKF 151 (308)
T ss_dssp CCCCEEEEEEECTTSSHHHHHHHHHHHHTTS---TTCCCEEEEEGGGGBCCHHHHHH--HTCTTCTTSGGGBCHHHHHHH
T ss_pred CCCCEEEEEeCCCCCCCcHHHHHHHHHHhhh---cCCCceEEEeeeeeECCchHHHH--hcCCccCCchHhhhHHHHHHH
Confidence 3557899999999999999999987654311 11122344454444332222221 11111 11234677777777
Q ss_pred HHHHhCCCc
Q 047598 282 LKTAVDGKR 290 (1112)
Q Consensus 282 l~~~l~~kr 290 (1112)
+.....+++
T Consensus 152 L~~lk~g~~ 160 (308)
T d1sq5a_ 152 VSDLKSGVP 160 (308)
T ss_dssp HHHHTTTCS
T ss_pred HHHHHcCCC
Confidence 777766654
No 102
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=93.86 E-value=0.029 Score=53.30 Aligned_cols=59 Identities=19% Similarity=0.069 Sum_probs=38.7
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCC-CCHHHHHHHHHHHhcCC
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDV-FDVLSISKALLESITRK 268 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~-~~~~~~~~~il~~l~~~ 268 (1112)
....||.++|+.|+||||.+.+++.....+ -..+..+++... ....+-++...+.++..
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~~-----~~kV~lit~Dt~R~gA~eQL~~~a~~l~i~ 68 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDE-----GKSVVLAAADTFRAAAIEQLKIWGERVGAT 68 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHHT-----TCCEEEEEECTTCHHHHHHHHHHHHHHTCE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHC-----CCceEEEeecccccchhHHHHHHhhhcCcc
Confidence 457899999999999998877776655322 235666666532 23345566666666543
No 103
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=93.84 E-value=0.014 Score=55.48 Aligned_cols=25 Identities=28% Similarity=0.441 Sum_probs=22.3
Q ss_pred EEEEEEccCCCcHHHHHHHHhcccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
++|.|.|++|+||||+|+.+.....
T Consensus 2 kiivi~G~~GsGKTT~~~~La~~L~ 26 (194)
T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKVKEILD 26 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHH
Confidence 6899999999999999999987653
No 104
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=93.76 E-value=0.0037 Score=57.99 Aligned_cols=82 Identities=15% Similarity=0.078 Sum_probs=44.2
Q ss_pred ccCCcccEEEeccc-cccc-----ccccccCCCcCcEEEccccccc-----cccccccCCCCCcEEeecCCCCC----cc
Q 047598 589 PKFKRLRVLSLQRY-YIGE-----LLVSFEDLKLLRYLNLADTMIR-----TLPESTNSLLNLEILILRNCSRL----KK 653 (1112)
Q Consensus 589 ~~~~~L~~L~L~~~-~~~~-----lp~~~~~l~~Lr~L~Ls~n~i~-----~lp~~i~~L~~L~~L~L~~~~~l----~~ 653 (1112)
...+.|+.|+|+++ .++. +-..+...++|++|+|++|.+. .+-..+...+.|+.|++++|... ..
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~ 93 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 93 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHH
Confidence 34466666777653 3421 2234556667777777777654 23334455667777777766221 11
Q ss_pred cCccccCCccccEEeec
Q 047598 654 LPSKMRNLINLHHLDIK 670 (1112)
Q Consensus 654 lp~~i~~L~~L~~L~L~ 670 (1112)
+...+...++|+.++|+
T Consensus 94 l~~~l~~~~~L~~l~L~ 110 (166)
T d1io0a_ 94 LVEALQSNTSLIELRID 110 (166)
T ss_dssp HHHGGGGCSSCCEEECC
T ss_pred HHHHHHhCccccEEeec
Confidence 23345555666665554
No 105
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=93.71 E-value=0.077 Score=50.16 Aligned_cols=57 Identities=21% Similarity=0.108 Sum_probs=36.1
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCC--HHHHHHHHHHHhcCC
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFD--VLSISKALLESITRK 268 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~--~~~~~~~il~~l~~~ 268 (1112)
+.+|+.++|+.|+||||.+.+++.....+ . ..+..+++ +.+. ..+-++...+.++..
T Consensus 9 ~~~vi~lvGp~GvGKTTTiaKLA~~~~~~----g-~kV~lit~-Dt~R~gA~eQL~~~a~~l~v~ 67 (207)
T d1ls1a2 9 DRNLWFLVGLQGSGKTTTAAKLALYYKGK----G-RRPLLVAA-DTQRPAAREQLRLLGEKVGVP 67 (207)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHHHHT----T-CCEEEEEC-CSSCHHHHHHHHHHHHHHTCC
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHHC----C-CcEEEEec-ccccchHHHHHHHHHHhcCCc
Confidence 45799999999999998877776655422 2 23555554 3333 334555566666553
No 106
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=93.69 E-value=0.014 Score=54.64 Aligned_cols=23 Identities=43% Similarity=0.638 Sum_probs=20.5
Q ss_pred EEEEccCCCcHHHHHHHHhcccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
|+|+|..|+|||||++.+.....
T Consensus 3 i~I~G~~G~GKSTLl~~i~~~l~ 25 (178)
T d1ye8a1 3 IIITGEPGVGKTTLVKKIVERLG 25 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHG
T ss_pred EEEECCCCcHHHHHHHHHHhcCC
Confidence 78999999999999999987553
No 107
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=93.46 E-value=0.12 Score=50.85 Aligned_cols=52 Identities=25% Similarity=0.303 Sum_probs=37.8
Q ss_pred EEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCC-CHHHHHHHHHHH
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVF-DVLSISKALLES 264 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~-~~~~~~~~il~~ 264 (1112)
-++|.|..|+|||+|+..+.++... .+=+.++++-+++.. .+.++.+++.+.
T Consensus 70 r~~If~~~g~GKt~l~~~i~~~~~~----~~~~v~V~~~iGer~~ev~~~~~~~~~~ 122 (276)
T d2jdid3 70 KIGLFGGAGVGKTVLIMELINNVAK----AHGGYSVFAGVGERTREGNDLYHEMIES 122 (276)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHTT----TCSSEEEEEEESCCHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCCCHHHHHHHHHHHHHh----hCCCeEEEEEeccChHHHHHHHHHHHhc
Confidence 4899999999999999998876321 234567888888765 345666666653
No 108
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=93.36 E-value=0.021 Score=54.03 Aligned_cols=25 Identities=28% Similarity=0.478 Sum_probs=21.2
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
+.++| |+|++|+||||+|+.+++..
T Consensus 3 ~~rii-l~G~pGSGKsT~a~~La~~~ 27 (190)
T d1ak2a1 3 GVRAV-LLGPPGAGKGTQAPKLAKNF 27 (190)
T ss_dssp CCEEE-EECCTTSSHHHHHHHHHHHH
T ss_pred ccEEE-EECCCCCCHHHHHHHHHHHh
Confidence 46677 78999999999999998754
No 109
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.27 E-value=0.02 Score=54.32 Aligned_cols=24 Identities=25% Similarity=0.372 Sum_probs=21.7
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+|.|.|++|+||||+|+.+++..
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~ 25 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKY 25 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh
Confidence 488999999999999999999754
No 110
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=93.23 E-value=0.04 Score=53.51 Aligned_cols=44 Identities=25% Similarity=0.319 Sum_probs=31.5
Q ss_pred EEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHHHHHHHHHhcCC
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSISKALLESITRK 268 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~~~~il~~l~~~ 268 (1112)
+|+|-|++|+||||+|+.+....... + .+.-++++.++......
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~~lg~~----------~------istGdl~R~~a~~~~~~ 48 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAKDFGFT----------Y------LDTGAMYRAATYMALKN 48 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHCCE----------E------EEHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCc----------E------ECHHHHHHHHHHHHHHc
Confidence 68899999999999999999875322 1 24456777766554433
No 111
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=93.18 E-value=0.024 Score=54.22 Aligned_cols=27 Identities=30% Similarity=0.315 Sum_probs=23.1
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
....||-+.|++|+||||+|+++.+..
T Consensus 22 ~kg~vIwltGlsGsGKTTia~~L~~~l 48 (208)
T d1m7ga_ 22 QRGLTIWLTGLSASGKSTLAVELEHQL 48 (208)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 345799999999999999999987653
No 112
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=93.09 E-value=0.019 Score=54.18 Aligned_cols=23 Identities=26% Similarity=0.411 Sum_probs=19.5
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.|.|.|++|+||||+|+.+....
T Consensus 8 rIiliG~PGSGKtT~a~~La~~~ 30 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVSSRITKHF 30 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHB
T ss_pred eEEEECCCCCCHHHHHHHHHHHH
Confidence 44577999999999999999764
No 113
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=93.06 E-value=0.018 Score=56.23 Aligned_cols=25 Identities=36% Similarity=0.484 Sum_probs=22.7
Q ss_pred EEEEEEccCCCcHHHHHHHHhcccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
.||+|.|++|+||||+|+.+.++..
T Consensus 4 piI~I~GppGSGKgT~ak~La~~~g 28 (225)
T d1ckea_ 4 PVITIDGPSGAGKGTLCKAMAEALQ 28 (225)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3999999999999999999998754
No 114
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=92.94 E-value=0.041 Score=56.34 Aligned_cols=40 Identities=23% Similarity=0.279 Sum_probs=30.2
Q ss_pred hHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 186 DKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 186 ~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
...++++.+.. ..++..+|+|.|++|+|||||..++....
T Consensus 36 ~~~~~~~~~~~------~~~~~~~igitG~pGaGKSTli~~l~~~~ 75 (323)
T d2qm8a1 36 AVRDLIDAVLP------QTGRAIRVGITGVPGVGKSTTIDALGSLL 75 (323)
T ss_dssp HHHHHHHHHGG------GCCCSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhh------ccCCceEEeeeCCCCCCHHHHHHHHHHHH
Confidence 34455555544 34568899999999999999998887654
No 115
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=92.93 E-value=0.044 Score=56.20 Aligned_cols=40 Identities=18% Similarity=0.213 Sum_probs=29.9
Q ss_pred HHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 187 KARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 187 ~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
..++++.+.. ..++..+|+|+|.+|+|||||...+.....
T Consensus 40 ~~~ll~~~~~------~~~~~~~IgitG~pGaGKSTLi~~l~~~~~ 79 (327)
T d2p67a1 40 STQLLDAIMP------YCGNTLRLGVTGTPGAGKSTFLEAFGMLLI 79 (327)
T ss_dssp HHHHHHHHGG------GCSCSEEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhh------ccCCceEEEeeCCCCCCHHHHHHHHHHHHH
Confidence 3455555544 235688999999999999999988876544
No 116
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=92.91 E-value=0.019 Score=52.89 Aligned_cols=113 Identities=17% Similarity=0.106 Sum_probs=72.7
Q ss_pred cCCCcceeccccccCCcccccccccccccccccCCcccEEEeccccccc-----ccccccCCCcCcEEEccccccc----
Q 047598 558 QTENLRTFLPIRIRGGTICSYITGIVLSDLLPKFKRLRVLSLQRYYIGE-----LLVSFEDLKLLRYLNLADTMIR---- 628 (1112)
Q Consensus 558 ~~~~lr~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~-----lp~~~~~l~~Lr~L~Ls~n~i~---- 628 (1112)
..+.|+.+.+.+...... .....+...+...+.|+.|+|++|.++. +-..+...+.|++|++++|.+.
T Consensus 15 ~~~~L~~L~L~~~~~i~~---~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~ 91 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPV---PTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 91 (166)
T ss_dssp TCTTCCEEECTTCTTCCH---HHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred cCCCCcEEEcCCCCCCCH---HHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhH
Confidence 456777776654221100 0011233446678899999999998743 3345667789999999998765
Q ss_pred -cccccccCCCCCcEEeecCCC-CCc-----ccCccccCCccccEEeecCCC
Q 047598 629 -TLPESTNSLLNLEILILRNCS-RLK-----KLPSKMRNLINLHHLDIKGAN 673 (1112)
Q Consensus 629 -~lp~~i~~L~~L~~L~L~~~~-~l~-----~lp~~i~~L~~L~~L~L~~~~ 673 (1112)
.+-..+...++|+.++|+.+. .++ .+...+.+.++|++|+++.+.
T Consensus 92 ~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 92 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 355667788999987776432 332 244456677888888887654
No 117
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=92.84 E-value=0.022 Score=53.34 Aligned_cols=22 Identities=27% Similarity=0.527 Sum_probs=19.9
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|.|.|++|+||||+|+.+++..
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVAAY 24 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 6799999999999999998764
No 118
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=92.76 E-value=0.13 Score=50.29 Aligned_cols=23 Identities=35% Similarity=0.491 Sum_probs=20.2
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
..++|+|..|+|||||++.+..-
T Consensus 45 e~vaivG~sGsGKSTLl~ll~gl 67 (255)
T d2hyda1 45 ETVAFVGMSGGGKSTLINLIPRF 67 (255)
T ss_dssp CEEEEECSTTSSHHHHHTTTTTS
T ss_pred CEEEEECCCCCcHHHHHHHHHhc
Confidence 48999999999999999887643
No 119
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.74 E-value=0.12 Score=51.23 Aligned_cols=82 Identities=17% Similarity=0.134 Sum_probs=48.8
Q ss_pred CCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCC-ceeEEEEeCCCCCHHHHHHHHHHHhcC-------CCCCCCCh
Q 047598 204 DANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKF-DIKAWVCISDVFDVLSISKALLESITR-------KPCHLNTL 275 (1112)
Q Consensus 204 ~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F-~~~~wv~~~~~~~~~~~~~~il~~l~~-------~~~~~~~~ 275 (1112)
....-+|+|.|..|+||||||..+....... ..+ ..++-++...-+-..+-...+.+.... ..+.+-+.
T Consensus 24 ~~~P~iIGi~G~qGSGKSTl~~~l~~~L~~~---~~~~~~v~~iS~DdfY~t~~~r~~L~~~~~~~pl~~~RG~PgThD~ 100 (286)
T d1odfa_ 24 NKCPLFIFFSGPQGSGKSFTSIQIYNHLMEK---YGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDM 100 (286)
T ss_dssp CCSCEEEEEECCTTSSHHHHHHHHHHHHHHH---HGGGSCEEEEEGGGGBCCHHHHHHHHHHTTTCGGGSSSCSTTSBCH
T ss_pred CCCCEEEEeECCCCCCHHHHHHHHHHHHHHH---hCCCcceEeeccCCCCCCHHHHHHHhhhccccccceecCCCcchhH
Confidence 3456799999999999999998876553221 112 234555666555444444455554422 22455667
Q ss_pred HHHHHHHHHHhCC
Q 047598 276 NEVQVDLKTAVDG 288 (1112)
Q Consensus 276 ~~~~~~l~~~l~~ 288 (1112)
+-+.+.+....++
T Consensus 101 ~ll~~~l~~l~~~ 113 (286)
T d1odfa_ 101 KLLQEVLNTIFNN 113 (286)
T ss_dssp HHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHhh
Confidence 6666666665544
No 120
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=92.68 E-value=0.022 Score=54.13 Aligned_cols=25 Identities=28% Similarity=0.421 Sum_probs=22.6
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.++|.|.|++|+||||+|+.+.+..
T Consensus 8 ~~iI~l~G~pGSGKsT~a~~La~~~ 32 (194)
T d3adka_ 8 SKIIFVVGGPGSGKGTQCEKIVQKY 32 (194)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHT
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHh
Confidence 4699999999999999999998764
No 121
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=92.67 E-value=0.025 Score=53.55 Aligned_cols=22 Identities=36% Similarity=0.412 Sum_probs=19.6
Q ss_pred eEEEEEEccCCCcHHHHHHHHh
Q 047598 207 FRVIPIVGMAGVGKTTLAREVY 228 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~ 228 (1112)
.-+|||+|+.|+||||+|..+-
T Consensus 3 p~IIgitG~~gSGKstva~~l~ 24 (191)
T d1uf9a_ 3 PIIIGITGNIGSGKSTVAALLR 24 (191)
T ss_dssp CEEEEEEECTTSCHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHH
Confidence 4589999999999999999874
No 122
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.60 E-value=0.024 Score=53.31 Aligned_cols=23 Identities=35% Similarity=0.624 Sum_probs=20.6
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.|.|+|++|+|||||++.+.++.
T Consensus 3 pIvl~GpsG~GK~tl~~~L~~~~ 25 (186)
T d1gkya_ 3 PIVISGPSGTGKSTLLKKLFAEY 25 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHC
T ss_pred eEEEECCCCCCHHHHHHHHHHhC
Confidence 47899999999999999998764
No 123
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.53 E-value=0.024 Score=53.09 Aligned_cols=24 Identities=33% Similarity=0.505 Sum_probs=21.4
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
++|.|+|++|+|||||++.+.++.
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~ 26 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERI 26 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHhhC
Confidence 488999999999999999998654
No 124
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=92.45 E-value=0.025 Score=52.98 Aligned_cols=22 Identities=32% Similarity=0.552 Sum_probs=20.0
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|.|.|++|+||||+|+.+++..
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQADRIVEKY 24 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 6789999999999999999865
No 125
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.39 E-value=0.028 Score=52.61 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=19.8
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|.|.|++|+||||+|+.+++..
T Consensus 3 I~i~G~pGsGKsT~a~~La~~~ 24 (181)
T d2cdna1 3 VLLLGPPGAGKGTQAVKLAEKL 24 (181)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 6788999999999999999764
No 126
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.29 E-value=0.022 Score=53.79 Aligned_cols=23 Identities=26% Similarity=0.648 Sum_probs=20.2
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.|+|+|++|+|||||++++....
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~ 24 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEH 24 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHhC
Confidence 47799999999999999998754
No 127
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=92.21 E-value=0.029 Score=52.98 Aligned_cols=23 Identities=22% Similarity=0.224 Sum_probs=20.3
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.|.|.|++|+||||+|+.+.+..
T Consensus 5 ~I~i~GppGsGKsT~a~~La~~~ 27 (189)
T d1zaka1 5 KVMISGAPASGKGTQCELIKTKY 27 (189)
T ss_dssp CEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 46799999999999999998765
No 128
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=92.18 E-value=0.12 Score=51.18 Aligned_cols=37 Identities=22% Similarity=0.218 Sum_probs=28.4
Q ss_pred HHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 189 RILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 189 ~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
++++.+... ..-+-++|.|..|+|||+|+.++.+...
T Consensus 32 r~ID~l~Pi-------grGQr~~I~g~~g~GKT~l~~~i~~~~~ 68 (289)
T d1xpua3 32 RVLDLASPI-------GRGQRGLIVAPPKAGKTMLLQNIAQSIA 68 (289)
T ss_dssp HHHHHHSCC-------BTTCEEEEEECSSSSHHHHHHHHHHHHH
T ss_pred eeeeecccc-------cCCCeeeEeCCCCCCHHHHHHHHHHHHh
Confidence 678877652 2334788999999999999999887543
No 129
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=92.08 E-value=0.1 Score=52.81 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=21.5
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-.++.++|++|+|||.||+.++...
T Consensus 123 ~g~~l~~G~pG~GKT~la~ala~~~ 147 (321)
T d1w44a_ 123 SGMVIVTGKGNSGKTPLVHALGEAL 147 (321)
T ss_dssp SEEEEEECSSSSCHHHHHHHHHHHH
T ss_pred CceEEEECCCCccHHHHHHHHHHHh
Confidence 3467779999999999999999874
No 130
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=91.85 E-value=0.038 Score=55.60 Aligned_cols=37 Identities=22% Similarity=0.236 Sum_probs=26.5
Q ss_pred EEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeC
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCIS 249 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~ 249 (1112)
+.|+|+|-||+||||+|-.+....... .+ .++-|.+.
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~----G~-rVllID~D 38 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAM----GK-TIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTT----TC-CEEEEEEC
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHhC----CC-cEEEEecC
Confidence 689999999999999998877655422 22 45555554
No 131
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.84 E-value=0.036 Score=51.78 Aligned_cols=24 Identities=29% Similarity=0.513 Sum_probs=20.0
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.++| |.|++|+||||+|+.+.+..
T Consensus 3 mrIv-l~G~pGSGKtT~a~~La~~~ 26 (180)
T d1akya1 3 IRMV-LIGPPGAGKGTQAPNLQERF 26 (180)
T ss_dssp CEEE-EECCTTSSHHHHHHHHHHHH
T ss_pred eEEE-EECCCCCCHHHHHHHHHHHh
Confidence 4555 77999999999999998764
No 132
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=91.84 E-value=0.062 Score=54.28 Aligned_cols=37 Identities=24% Similarity=0.393 Sum_probs=28.4
Q ss_pred hHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 186 DKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 186 ~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
++..+.+.+.. ...+||.+.|-||+||||+|-.+...
T Consensus 7 ~~~~~~~~~~~--------~~~~iii~sGKGGVGKTT~a~nLA~~ 43 (279)
T d1ihua2 7 SLSALVDDIAR--------NEHGLIMLMGKGGVGKTTMAAAIAVR 43 (279)
T ss_dssp CHHHHHHHHHT--------TSCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred cHHHHHHHhhc--------CCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 35566666644 56789999999999999998777653
No 133
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=91.75 E-value=0.042 Score=52.11 Aligned_cols=27 Identities=30% Similarity=0.240 Sum_probs=23.1
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
...-+|+|-|..|+||||+|+.+.+..
T Consensus 7 ~kp~~I~ieG~~GsGKTTl~~~L~~~l 33 (197)
T d2vp4a1 7 TQPFTVLIEGNIGSGKTTYLNHFEKYK 33 (197)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGGT
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHh
Confidence 445699999999999999999987653
No 134
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.67 E-value=0.036 Score=51.50 Aligned_cols=24 Identities=17% Similarity=0.522 Sum_probs=21.4
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
+.|.|+|++|+|||||++++..+.
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~ 27 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKH 27 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHC
T ss_pred CcEEEECCCCCCHHHHHHHHHHhC
Confidence 579999999999999999998654
No 135
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=91.49 E-value=0.039 Score=51.46 Aligned_cols=22 Identities=27% Similarity=0.317 Sum_probs=19.6
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|.|.|++|+||||+|+.+++..
T Consensus 3 I~i~G~pGSGKsT~~~~La~~~ 24 (179)
T d1e4va1 3 IILLGAPVAGKGTQAQFIMEKY 24 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 5689999999999999998764
No 136
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=90.23 E-value=0.083 Score=53.79 Aligned_cols=45 Identities=18% Similarity=0.037 Sum_probs=31.8
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHH
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVL 255 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~ 255 (1112)
..++|.+.|-||+||||+|..+......+ -..+.-|+.....+..
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~-----G~rVLlvD~Dp~~~l~ 51 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQ-----GKRVLLVSTDPASNVG 51 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHT-----TCCEEEEECCTTCCHH
T ss_pred CCeEEEEECCCcChHHHHHHHHHHHHHHC-----CCCEEEEeCCCCCCHH
Confidence 45788899999999999887776655322 2356677777555543
No 137
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=90.19 E-value=0.095 Score=54.49 Aligned_cols=29 Identities=28% Similarity=0.142 Sum_probs=24.8
Q ss_pred CCCeEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 204 DANFRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 204 ~~~~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
.+..+.+.++|++|+|||++|..+++...
T Consensus 151 ~~~~~~~~~~g~~~~gk~~~~~~~~~~~~ 179 (362)
T d1svma_ 151 IPKKRYWLFKGPIDSGKTTLAAALLELCG 179 (362)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHC
T ss_pred CCCcCeEEEECCCCCCHHHHHHHHHHHcC
Confidence 34567899999999999999999998654
No 138
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=90.09 E-value=0.067 Score=52.66 Aligned_cols=22 Identities=45% Similarity=0.582 Sum_probs=19.9
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
||+|.|+.|+|||||...+.+.
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~ 23 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRY 23 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHHHHHH
Confidence 7999999999999999988754
No 139
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=90.07 E-value=0.074 Score=51.36 Aligned_cols=24 Identities=29% Similarity=0.423 Sum_probs=21.2
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+++|+|..|+|||||++.++--.
T Consensus 30 e~~~liG~sGaGKSTll~~i~gl~ 53 (240)
T d1g2912 30 EFMILLGPSGCGKTTTLRMIAGLE 53 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHhcCC
Confidence 499999999999999999997643
No 140
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=89.93 E-value=0.073 Score=50.85 Aligned_cols=21 Identities=29% Similarity=0.502 Sum_probs=18.7
Q ss_pred EEEEEEccCCCcHHHHHHHHh
Q 047598 208 RVIPIVGMAGVGKTTLAREVY 228 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~ 228 (1112)
-+|+|+|+.|+||||+|+.+-
T Consensus 4 ~iIgitG~igSGKStv~~~l~ 24 (208)
T d1vhta_ 4 YIVALTGGIGSGKSTVANAFA 24 (208)
T ss_dssp EEEEEECCTTSCHHHHHHHHH
T ss_pred EEEEEECCCcCCHHHHHHHHH
Confidence 389999999999999998763
No 141
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=89.90 E-value=0.068 Score=50.77 Aligned_cols=24 Identities=17% Similarity=0.389 Sum_probs=21.3
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
+++.|+|++|+|||||++.+....
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~ 26 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQ 26 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHhhC
Confidence 488999999999999999998753
No 142
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=89.86 E-value=0.075 Score=50.98 Aligned_cols=23 Identities=26% Similarity=0.390 Sum_probs=20.7
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.+++|+|..|+|||||.+.+.--
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~gl 54 (230)
T d1l2ta_ 32 EFVSIMGPSGSGKSTMLNIIGCL 54 (230)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCcchhhHhccCC
Confidence 49999999999999999988764
No 143
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=89.85 E-value=0.27 Score=50.92 Aligned_cols=133 Identities=17% Similarity=0.128 Sum_probs=63.2
Q ss_pred hhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHHHHHHHH
Q 047598 184 DKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSISKALLE 263 (1112)
Q Consensus 184 ~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~~~~il~ 263 (1112)
+..+..+...+.. +++.|.|.+|.||||++..+........ ..-...+.+..........+.+.+..
T Consensus 151 ~~Q~~A~~~al~~-----------~~~vI~G~pGTGKTt~i~~~l~~l~~~~--~~~~~~I~l~ApTgkAA~~L~e~~~~ 217 (359)
T d1w36d1 151 NWQKVAAAVALTR-----------RISVISGGPGTGKTTTVAKLLAALIQMA--DGERCRIRLAAPTGKAAARLTESLGK 217 (359)
T ss_dssp CHHHHHHHHHHTB-----------SEEEEECCTTSTHHHHHHHHHHHHHHTC--SSCCCCEEEEBSSHHHHHHHHHHHTH
T ss_pred cHHHHHHHHHHcC-----------CeEEEEcCCCCCceehHHHHHHHHHHHH--hccCCeEEEecCcHHHHHHHHHHHHH
Confidence 4556666665532 4899999999999998855433221110 11234566666554433333333332
Q ss_pred Hh---cCCC-------CCCCChH------HHHHHHHHH-hCC-CcEEEEEeCCCCCChhhHHHHHhcccCCCCCcEEEEE
Q 047598 264 SI---TRKP-------CHLNTLN------EVQVDLKTA-VDG-KRFLLVLDDVWNEDYSLWVDLKAPLLAAAPNSKMIIT 325 (1112)
Q Consensus 264 ~l---~~~~-------~~~~~~~------~~~~~l~~~-l~~-kr~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~iivT 325 (1112)
.. .... ....+.. .....+... -.. .--++|+|.....+......+...+ ..+++||+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~t~~~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~~~l~~~ll~~~---~~~~~lILv 294 (359)
T d1w36d1 218 ALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDAL---PDHARVIFL 294 (359)
T ss_dssp HHHHSSCCSCCCCSCSCCCBTTTSCC-----------CTTSCCSCSEEEECSGGGCBHHHHHHHHHTC---CTTCEEEEE
T ss_pred HHhhcCchhhhhhhhhhhhhHHHHHHhhhhcchHHHHhhhcccccceeeehhhhccCHHHHHHHHHHh---cCCCEEEEE
Confidence 21 1100 0011110 001111110 001 1238999998655433333444433 457788887
Q ss_pred cCChhhh
Q 047598 326 TRHSHVA 332 (1112)
Q Consensus 326 TR~~~v~ 332 (1112)
=-..+..
T Consensus 295 GD~~QLp 301 (359)
T d1w36d1 295 GDRDQLA 301 (359)
T ss_dssp ECTTSGG
T ss_pred CChhhcc
Confidence 6655554
No 144
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=89.83 E-value=0.063 Score=50.67 Aligned_cols=24 Identities=33% Similarity=0.494 Sum_probs=21.7
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+++|+|+.|+|||||.+.++.-.
T Consensus 28 ei~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 28 NVVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp CCEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCChHHHHHHHHhccc
Confidence 489999999999999999998754
No 145
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=89.81 E-value=0.075 Score=53.92 Aligned_cols=39 Identities=21% Similarity=0.153 Sum_probs=26.2
Q ss_pred EEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCC
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDV 251 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~ 251 (1112)
+.|+|.|-||+||||+|..+..-.... -..++-|.....
T Consensus 3 r~IaisgKGGVGKTT~a~NLA~~LA~~-----G~rVLlID~DpQ 41 (289)
T d2afhe1 3 RQCAIYGKGGIGKSTTTQNLVAALAEM-----GKKVMIVGCDPK 41 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHT-----TCCEEEEEECSS
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHC-----CCCEEEEecCCC
Confidence 678899999999999887766544321 123555666543
No 146
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=89.79 E-value=0.072 Score=51.44 Aligned_cols=24 Identities=33% Similarity=0.516 Sum_probs=21.5
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+++|+|..|+|||||++.++--.
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHcCCc
Confidence 599999999999999999997644
No 147
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=89.53 E-value=0.08 Score=51.99 Aligned_cols=23 Identities=39% Similarity=0.543 Sum_probs=20.9
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.+++|+|..|+|||||++.+.--
T Consensus 29 Ei~~iiG~sGsGKSTLl~~i~Gl 51 (258)
T d1b0ua_ 29 DVISIIGSSGSGKSTFLRCINFL 51 (258)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCcHHHHHHHHHcC
Confidence 49999999999999999999753
No 148
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=89.50 E-value=0.087 Score=50.53 Aligned_cols=24 Identities=33% Similarity=0.499 Sum_probs=21.2
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+++|+|+.|+|||||.+.++--.
T Consensus 27 ei~~liGpsGsGKSTLl~~i~Gl~ 50 (232)
T d2awna2 27 EFVVFVGPSGCGKSTLLRMIAGLE 50 (232)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHhcCC
Confidence 499999999999999999987643
No 149
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=89.38 E-value=0.11 Score=50.93 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=32.9
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCC
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDV 251 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~ 251 (1112)
+.-.++.|+|.+|+|||++|.++..+.. .....++|++....
T Consensus 24 ~~gsl~li~G~pGsGKT~l~~qia~~~~-----~~~~~~~~is~e~~ 65 (242)
T d1tf7a2 24 FKDSIILATGATGTGKTLLVSRFVENAC-----ANKERAILFAYEES 65 (242)
T ss_dssp ESSCEEEEEECTTSSHHHHHHHHHHHHH-----TTTCCEEEEESSSC
T ss_pred cCCeEEEEEeCCCCCHHHHHHHHHHHHH-----HhccccceeeccCC
Confidence 3456999999999999999999888753 34566788887644
No 150
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.31 E-value=0.068 Score=52.53 Aligned_cols=25 Identities=24% Similarity=0.266 Sum_probs=22.5
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+.|+|-|+.|+||||+|+.+.+..
T Consensus 2 ~k~I~ieG~dGsGKST~~~~L~~~l 26 (241)
T d1p5zb_ 2 IKKISIEGNIAAGKSTFVNILKQLC 26 (241)
T ss_dssp CEEEEEECSTTSSHHHHHTTTGGGC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 4789999999999999999998764
No 151
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=89.22 E-value=0.38 Score=47.26 Aligned_cols=39 Identities=23% Similarity=0.197 Sum_probs=28.5
Q ss_pred EEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCC
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVF 252 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~ 252 (1112)
-++|+|..|+|||+|+........ ..-+.++++-+.+..
T Consensus 69 r~~Ifg~~g~GKt~l~~~~~~~~~-----~~~~v~V~~~iGer~ 107 (276)
T d1fx0a3 69 RELIIGDRQTGKTAVATDTILNQQ-----GQNVICVYVAIGQKA 107 (276)
T ss_dssp BCBEEESSSSSHHHHHHHHHHTCC-----TTTCEEEEEEESCCH
T ss_pred eEeeccCCCCChHHHHHHHHhhhc-----ccCceeeeeeecchh
Confidence 478999999999999987554432 334567788777664
No 152
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=89.19 E-value=0.083 Score=51.79 Aligned_cols=23 Identities=30% Similarity=0.536 Sum_probs=20.7
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.+++|+|..|+|||||++.+..-
T Consensus 42 e~iaivG~sGsGKSTLl~ll~gl 64 (253)
T d3b60a1 42 KTVALVGRSGSGKSTIASLITRF 64 (253)
T ss_dssp CEEEEEECTTSSHHHHHHHHTTT
T ss_pred CEEEEECCCCChHHHHHHHHhcc
Confidence 48999999999999999999654
No 153
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=89.19 E-value=0.095 Score=50.48 Aligned_cols=24 Identities=29% Similarity=0.439 Sum_probs=21.3
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+++|+|+.|.|||||.+.+.--.
T Consensus 33 e~~~liGpsGaGKSTLl~~i~Gl~ 56 (239)
T d1v43a3 33 EFLVLLGPSGCGKTTTLRMIAGLE 56 (239)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHHcCC
Confidence 489999999999999999987643
No 154
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=89.18 E-value=0.1 Score=50.80 Aligned_cols=25 Identities=24% Similarity=0.240 Sum_probs=21.7
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-.+++|+|..|+|||||++.+..-.
T Consensus 28 Ge~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 28 NSIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp TEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhh
Confidence 4699999999999999999986543
No 155
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.13 E-value=0.094 Score=51.46 Aligned_cols=25 Identities=28% Similarity=0.349 Sum_probs=22.6
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+.|+|-|.-|+||||+++.+.+..
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l 26 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTY 26 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHC
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHH
Confidence 5799999999999999999998764
No 156
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.11 E-value=0.19 Score=49.21 Aligned_cols=51 Identities=10% Similarity=0.037 Sum_probs=35.0
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccccccc-cCCCCceeEEEEeCCCCCHH
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDKSLNA-KDFKFDIKAWVCISDVFDVL 255 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~-~~~~F~~~~wv~~~~~~~~~ 255 (1112)
..-+++-|+|.+|+||||+|.++........ ....-..++|+.....++..
T Consensus 32 ~~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 83 (251)
T d1szpa2 32 ETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPV 83 (251)
T ss_dssp ESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGG
T ss_pred cCCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecchHHHH
Confidence 3456999999999999999998876543220 01223467888877766543
No 157
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=89.09 E-value=0.093 Score=49.96 Aligned_cols=21 Identities=33% Similarity=0.464 Sum_probs=18.9
Q ss_pred EEEEEEccCCCcHHHHHHHHh
Q 047598 208 RVIPIVGMAGVGKTTLAREVY 228 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~ 228 (1112)
-+|||+|..|+||||+|+.+-
T Consensus 3 ~iIgITG~igSGKStv~~~l~ 23 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTTIANLFT 23 (205)
T ss_dssp EEEEEECSTTSCHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHH
Confidence 489999999999999998774
No 158
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.87 E-value=0.096 Score=51.26 Aligned_cols=25 Identities=36% Similarity=0.353 Sum_probs=21.8
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-.+++|+|..|+|||||++.+..-.
T Consensus 40 Ge~vaivG~sGsGKSTLl~li~gl~ 64 (251)
T d1jj7a_ 40 GEVTALVGPNGSGKSTVAALLQNLY 64 (251)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCEEEEECCCCCcHHHHHHHHhccc
Confidence 3589999999999999999987644
No 159
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=88.84 E-value=0.1 Score=50.10 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=20.8
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
+++|+|+.|+|||||.+.++.-.
T Consensus 26 ~~~liGpnGaGKSTll~~i~Gl~ 48 (240)
T d2onka1 26 YCVLLGPTGAGKSVFLELIAGIV 48 (240)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSS
T ss_pred EEEEECCCCChHHHHHHHHHcCC
Confidence 78899999999999999998754
No 160
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=88.74 E-value=0.089 Score=47.55 Aligned_cols=22 Identities=32% Similarity=0.472 Sum_probs=19.1
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|.|+|.+|+|||||...+..+.
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 5699999999999999987653
No 161
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.44 E-value=0.47 Score=46.49 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=37.2
Q ss_pred CCCeEEEEEEccCCCcHHHHHHHHhccccccc-cCCCCceeEEEEeCCCCCHH
Q 047598 204 DANFRVIPIVGMAGVGKTTLAREVYNDKSLNA-KDFKFDIKAWVCISDVFDVL 255 (1112)
Q Consensus 204 ~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~-~~~~F~~~~wv~~~~~~~~~ 255 (1112)
-..-+++.|+|.+|+|||++|.++........ ....+..+.|+.....+...
T Consensus 34 ip~G~~~~i~G~~GsGKT~lalq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (258)
T d1v5wa_ 34 IESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPD 86 (258)
T ss_dssp BCSSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCHH
T ss_pred CcCCEEEEEECCCCCCHHHHHHHHHHHHHhhhhcccccceEEEechHHHHHHH
Confidence 34568999999999999999998876432211 12455678888887776644
No 162
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=88.41 E-value=0.11 Score=47.47 Aligned_cols=22 Identities=36% Similarity=0.569 Sum_probs=19.6
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|+|+|.+|+|||||..++.++.
T Consensus 8 I~ivG~~~vGKSSLi~~~~~~~ 29 (169)
T d1upta_ 8 ILILGLDGAGKTTILYRLQVGE 29 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6799999999999999987764
No 163
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=88.35 E-value=0.44 Score=46.66 Aligned_cols=52 Identities=19% Similarity=0.197 Sum_probs=36.3
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccccccc-cCCCCceeEEEEeCCCCCHHH
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDKSLNA-KDFKFDIKAWVCISDVFDVLS 256 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~-~~~~F~~~~wv~~~~~~~~~~ 256 (1112)
+.-+++.|+|.+|+||||+|.++........ ........+|+......+...
T Consensus 34 p~G~~~li~G~pGsGKT~~~lq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (254)
T d1pzna2 34 ETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPER 86 (254)
T ss_dssp ESSEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESSSCCCHHH
T ss_pred cCCEEEEEEcCCCCCHHHHHHHHHHHhhchHHhcCCCceEEEEeccchhHHHH
Confidence 4567999999999999999988876543211 112345678888877766543
No 164
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=88.31 E-value=0.13 Score=48.95 Aligned_cols=24 Identities=33% Similarity=0.516 Sum_probs=20.8
Q ss_pred EEEEEccCCCcHHHHHHHHhcccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
.|+|-|..|+||||+++.+.+...
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~l~ 25 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGAFR 25 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 588999999999999999887643
No 165
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=88.26 E-value=0.095 Score=50.09 Aligned_cols=24 Identities=25% Similarity=0.315 Sum_probs=21.4
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+++|+|+.|+|||||.+.+.--.
T Consensus 27 e~~~liGpsGaGKSTll~~l~Gl~ 50 (229)
T d3d31a2 27 EYFVILGPTGAGKTLFLELIAGFH 50 (229)
T ss_dssp CEEEEECCCTHHHHHHHHHHHTSS
T ss_pred CEEEEECCCCCcHHHHHHHHhcCc
Confidence 499999999999999999997643
No 166
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=88.21 E-value=0.41 Score=45.41 Aligned_cols=25 Identities=36% Similarity=0.464 Sum_probs=21.6
Q ss_pred EEEEEEccCCCcHHHHHHHHhcccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
+.|+|-|..|+||||+++.+.+...
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L~ 27 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETLE 27 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4789999999999999999887653
No 167
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=88.21 E-value=0.083 Score=54.87 Aligned_cols=45 Identities=22% Similarity=0.329 Sum_probs=32.2
Q ss_pred CcceecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhc
Q 047598 177 ERAVYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 177 ~~~~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~ 229 (1112)
-+.++|.+..+..+.-.... .+..=|-|+|.+|+||||+|+.+..
T Consensus 6 f~~I~Gq~~~kral~laa~~--------~~~h~vLl~G~pG~GKT~lar~~~~ 50 (333)
T d1g8pa_ 6 FSAIVGQEDMKLALLLTAVD--------PGIGGVLVFGDRGTGKSTAVRALAA 50 (333)
T ss_dssp GGGSCSCHHHHHHHHHHHHC--------GGGCCEEEECCGGGCTTHHHHHHHH
T ss_pred hhhccCcHHHHHHHHHHHhc--------cCCCeEEEECCCCccHHHHHHHHHH
Confidence 45789999877765544332 0112478999999999999998863
No 168
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=88.19 E-value=0.12 Score=48.55 Aligned_cols=27 Identities=22% Similarity=0.481 Sum_probs=22.9
Q ss_pred CCCeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 204 DANFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 204 ~~~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
..+...|+|+|.+|+|||||...+.+.
T Consensus 20 ~~~~~~I~lvG~~n~GKSTLin~L~g~ 46 (195)
T d1svia_ 20 EGGLPEIALAGRSNVGKSSFINSLINR 46 (195)
T ss_dssp CSCCCEEEEEEBTTSSHHHHHHHHHTC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHhcCC
Confidence 345667999999999999999999864
No 169
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.16 E-value=0.11 Score=51.75 Aligned_cols=26 Identities=27% Similarity=0.408 Sum_probs=22.4
Q ss_pred eEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
-.+++|+|..|+|||||++.+..-..
T Consensus 62 Ge~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 62 GEMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp TCEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred CCEEEEECCCCChHHHHHHHHhCCCc
Confidence 35899999999999999999976543
No 170
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=88.12 E-value=0.17 Score=46.88 Aligned_cols=23 Identities=30% Similarity=0.486 Sum_probs=19.5
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.-|+|+|.+|+|||||..++...
T Consensus 14 ~kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 14 GKLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp EEEEEEEETTSSHHHHHHHHSCC
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 34669999999999999988654
No 171
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.07 E-value=0.11 Score=49.45 Aligned_cols=25 Identities=24% Similarity=0.399 Sum_probs=22.0
Q ss_pred EEEEEEccCCCcHHHHHHHHhcccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
..|+|-|+.|+||||+|+.+.+...
T Consensus 4 ~lI~ieG~dGsGKsT~~~~L~~~L~ 28 (209)
T d1nn5a_ 4 ALIVLEGVDRAGKSTQSRKLVEALC 28 (209)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHH
Confidence 5789999999999999999988654
No 172
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=88.03 E-value=0.18 Score=48.84 Aligned_cols=38 Identities=24% Similarity=0.152 Sum_probs=28.6
Q ss_pred EEEEEE-ccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCC
Q 047598 208 RVIPIV-GMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISD 250 (1112)
Q Consensus 208 ~vv~I~-G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~ 250 (1112)
|||+|+ |-||+||||+|..++...... -..++.|.+..
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~~la~~-----g~~VlliD~D~ 40 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGVALAQL-----GHDVTIVDADI 40 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHT-----TCCEEEEECCC
T ss_pred EEEEEECCCCCChHHHHHHHHHHHHHhC-----CCCEEEEeCCC
Confidence 688888 899999999998887665422 23577787753
No 173
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=88.00 E-value=0.87 Score=45.15 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=36.0
Q ss_pred EEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHHHHHHHHHhcC
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSISKALLESITR 267 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~~~~il~~l~~ 267 (1112)
.++.|.|.+|+||||+|.++..+.... ..+ .+++++.. .+..++...++.....
T Consensus 36 ~l~vi~G~~G~GKT~~~~~la~~~a~~---~g~-~v~~~s~E--~~~~~~~~r~~~~~~~ 89 (277)
T d1cr2a_ 36 EVIMVTSGSGMGKSTFVRQQALQWGTA---MGK-KVGLAMLE--ESVEETAEDLIGLHNR 89 (277)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHHT---SCC-CEEEEESS--SCHHHHHHHHHHHHTT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhhhhh---ccc-ceeEeeec--cchhhHHhHHHHHhhc
Confidence 488899999999999998887654222 222 45555554 4466666676665544
No 174
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.80 E-value=0.12 Score=46.98 Aligned_cols=22 Identities=32% Similarity=0.437 Sum_probs=19.3
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.++|.+|+|||||+..+.++
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3679999999999999988765
No 175
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.61 E-value=0.13 Score=47.33 Aligned_cols=21 Identities=33% Similarity=0.509 Sum_probs=18.7
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|.|+|.+|+|||||+..+.++
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 678999999999999987765
No 176
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.57 E-value=0.13 Score=46.90 Aligned_cols=22 Identities=32% Similarity=0.463 Sum_probs=19.0
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.|+|.+|+|||+|+..+.++
T Consensus 6 KivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3678999999999999888764
No 177
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=87.53 E-value=0.066 Score=53.12 Aligned_cols=25 Identities=20% Similarity=0.349 Sum_probs=18.3
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
..||+|.|.+|+||||+|+.+.+-.
T Consensus 4 ~pIIgIaG~SGSGKTTva~~l~~i~ 28 (288)
T d1a7ja_ 4 HPIISVTGSSGAGTSTVKHTFDQIF 28 (288)
T ss_dssp SCEEEEESCC---CCTHHHHHHHHH
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHH
Confidence 3499999999999999999876643
No 178
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.53 E-value=0.13 Score=46.75 Aligned_cols=21 Identities=24% Similarity=0.509 Sum_probs=18.4
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|.++|.+|+|||||+..+.+.
T Consensus 5 v~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 669999999999999887754
No 179
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=87.13 E-value=0.14 Score=49.55 Aligned_cols=24 Identities=25% Similarity=0.469 Sum_probs=21.6
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+++|+|+.|.|||||.+.+.--.
T Consensus 33 ei~~liGpnGaGKSTl~~~i~Gl~ 56 (240)
T d1ji0a_ 33 QIVTLIGANGAGKTTTLSAIAGLV 56 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCcHHHHHHHHhCCC
Confidence 499999999999999999998654
No 180
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.05 E-value=0.15 Score=46.70 Aligned_cols=22 Identities=27% Similarity=0.578 Sum_probs=18.9
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|+++|.+|+|||||...+.++.
T Consensus 5 i~viG~~~vGKTsLi~r~~~~~ 26 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKGT 26 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTCC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 5789999999999999887653
No 181
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=86.96 E-value=0.15 Score=46.34 Aligned_cols=21 Identities=24% Similarity=0.580 Sum_probs=18.8
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|.|+|.+|+|||||...+..+
T Consensus 5 i~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 5 LLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEECSTTSSHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHcCC
Confidence 669999999999999998764
No 182
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=86.67 E-value=0.16 Score=49.86 Aligned_cols=24 Identities=33% Similarity=0.379 Sum_probs=21.7
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+++|+|+.|.|||||++.+.--.
T Consensus 31 ei~~liG~nGaGKSTLl~~i~Gl~ 54 (254)
T d1g6ha_ 31 DVTLIIGPNGSGKSTLINVITGFL 54 (254)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCcHHHHHHHHHCCC
Confidence 489999999999999999998754
No 183
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=86.67 E-value=0.16 Score=46.49 Aligned_cols=22 Identities=36% Similarity=0.483 Sum_probs=19.1
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.++|.+|+|||||...+.++
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHcC
Confidence 3789999999999999988654
No 184
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.61 E-value=0.16 Score=46.34 Aligned_cols=22 Identities=27% Similarity=0.430 Sum_probs=19.0
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.|+|.+|+|||+|+..+.++
T Consensus 5 KivlvG~~~vGKTsLi~r~~~~ 26 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCEN 26 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3679999999999999988754
No 185
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=86.59 E-value=0.16 Score=49.09 Aligned_cols=24 Identities=29% Similarity=0.408 Sum_probs=21.6
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.+++|+|+.|+|||||.+.+..-.
T Consensus 29 ei~glvG~nGaGKSTLl~~l~G~~ 52 (238)
T d1vpla_ 29 EIFGLIGPNGAGKTTTLRIISTLI 52 (238)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHhcCC
Confidence 499999999999999999997654
No 186
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=86.51 E-value=0.16 Score=48.73 Aligned_cols=25 Identities=40% Similarity=0.651 Sum_probs=22.6
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
++.|..|.|+-|+|||||.+.+.+.
T Consensus 2 ~iPv~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 2 PIAVTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp CEEEEEEEESSSSSCHHHHHHHHHS
T ss_pred CCCEEEEeeCCCCCHHHHHHHHHhc
Confidence 4789999999999999999998875
No 187
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.49 E-value=0.17 Score=46.19 Aligned_cols=21 Identities=38% Similarity=0.564 Sum_probs=18.7
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|.++|.+|+|||||++.+.+.
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 678999999999999988764
No 188
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=86.46 E-value=0.11 Score=50.02 Aligned_cols=23 Identities=35% Similarity=0.450 Sum_probs=20.9
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.+++|+|..|+|||||.+.+..-
T Consensus 32 e~~~iiG~sGsGKSTll~~i~gl 54 (242)
T d1oxxk2 32 ERFGILGPSGAGKTTFMRIIAGL 54 (242)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTS
T ss_pred CEEEEECCCCCcHHHHHHHHHcC
Confidence 49999999999999999998764
No 189
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.44 E-value=0.16 Score=46.24 Aligned_cols=22 Identities=27% Similarity=0.564 Sum_probs=19.1
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|+|+|.+|+|||||...+.++.
T Consensus 7 i~lvG~~~vGKTsli~rl~~~~ 28 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVEDS 28 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6688999999999999987653
No 190
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=86.43 E-value=0.21 Score=45.99 Aligned_cols=25 Identities=36% Similarity=0.490 Sum_probs=22.1
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
...|+|+|.+|+|||||...+....
T Consensus 5 ~~~I~lvG~~~~GKSSLin~l~~~~ 29 (178)
T d1wf3a1 5 SGFVAIVGKPNVGKSTLLNNLLGVK 29 (178)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHTSC
T ss_pred CcEEEEECCCCCCHHHHHHHHhCCC
Confidence 4689999999999999999998653
No 191
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.43 E-value=0.16 Score=46.21 Aligned_cols=22 Identities=32% Similarity=0.493 Sum_probs=19.0
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|.|+|.+|+|||||+..+.++.
T Consensus 3 v~vvG~~~vGKTsLi~r~~~~~ 24 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMYDS 24 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6789999999999999887543
No 192
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.41 E-value=0.16 Score=46.62 Aligned_cols=22 Identities=45% Similarity=0.655 Sum_probs=19.4
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.|+|.+|+|||||.+.+.++
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4779999999999999988764
No 193
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.35 E-value=0.17 Score=46.18 Aligned_cols=23 Identities=26% Similarity=0.524 Sum_probs=19.7
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-|.++|.+|+|||||...+.++.
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTGT 27 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 47789999999999999887653
No 194
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=86.30 E-value=0.18 Score=46.08 Aligned_cols=22 Identities=36% Similarity=0.549 Sum_probs=19.3
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.|+|+|.+|+|||||..++...
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC-
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5899999999999999998753
No 195
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.27 E-value=0.17 Score=47.03 Aligned_cols=21 Identities=33% Similarity=0.506 Sum_probs=18.8
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|.|+|.+|+|||||+..+.+.
T Consensus 8 i~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHCS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 678999999999999998764
No 196
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=86.08 E-value=0.22 Score=45.93 Aligned_cols=25 Identities=36% Similarity=0.518 Sum_probs=22.2
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-...|+|+|.+|+|||||..++.+.
T Consensus 4 ~~~~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 4 YCGFIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEEEEECSSSSSHHHHHHHHHTC
T ss_pred cccEEEEECCCCCCHHHHHHHHhCC
Confidence 3568999999999999999999864
No 197
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.07 E-value=0.16 Score=48.45 Aligned_cols=26 Identities=31% Similarity=0.405 Sum_probs=22.8
Q ss_pred eEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
-+.|+|-|+-|+||||+++.+.+..+
T Consensus 3 Gk~I~iEG~DGsGKST~~~~L~~~L~ 28 (214)
T d1tmka_ 3 GKLILIEGLDRTGKTTQCNILYKKLQ 28 (214)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHH
Confidence 35899999999999999999987654
No 198
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.04 E-value=0.17 Score=46.12 Aligned_cols=21 Identities=38% Similarity=0.618 Sum_probs=19.0
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|.++|.+|+|||||+.++.+.
T Consensus 5 i~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999998765
No 199
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=86.00 E-value=0.24 Score=45.44 Aligned_cols=22 Identities=32% Similarity=0.593 Sum_probs=19.3
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.++|.+|+|||||...+...
T Consensus 18 kI~vvG~~~vGKSsLi~~l~~~ 39 (176)
T d1fzqa_ 18 RILLLGLDNAGKTTLLKQLASE 39 (176)
T ss_dssp EEEEEESTTSSHHHHHHHHCCS
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4679999999999999998664
No 200
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.94 E-value=0.18 Score=46.11 Aligned_cols=23 Identities=22% Similarity=0.436 Sum_probs=19.6
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-|.|+|.+|+|||||+..+.++.
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~~ 30 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKGQ 30 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 47899999999999999887543
No 201
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=85.89 E-value=0.18 Score=49.22 Aligned_cols=23 Identities=26% Similarity=0.400 Sum_probs=21.0
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
++|+|+|..|+||||+|+.+.+.
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e~ 24 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMSN 24 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHh
Confidence 68999999999999999998764
No 202
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.86 E-value=0.18 Score=45.97 Aligned_cols=22 Identities=36% Similarity=0.647 Sum_probs=19.1
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|.++|.+|+|||+|...+.++.
T Consensus 5 i~lvG~~~vGKTsli~r~~~~~ 26 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTKR 26 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 5689999999999999988754
No 203
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.82 E-value=0.17 Score=46.41 Aligned_cols=24 Identities=29% Similarity=0.477 Sum_probs=19.8
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
--|.|+|.+|+|||+|+..+.++.
T Consensus 7 ~Kv~lvG~~~vGKTsLi~r~~~~~ 30 (173)
T d2fn4a1 7 HKLVVVGGGGVGKSALTIQFIQSY 30 (173)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEEEECCCCcCHHHHHHHHHhCC
Confidence 346799999999999999877643
No 204
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.61 E-value=0.65 Score=44.29 Aligned_cols=49 Identities=12% Similarity=0.068 Sum_probs=31.1
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccccccccC-CCCceeEEEEeCCCCCH
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDKSLNAKD-FKFDIKAWVCISDVFDV 254 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~-~~F~~~~wv~~~~~~~~ 254 (1112)
.-+++.|.|.+|+|||++|.++..+....... ..+....++........
T Consensus 22 ~G~v~~i~G~~GsGKT~l~l~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (242)
T d1n0wa_ 22 TGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRP 71 (242)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSSCCCH
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHHHHHhhccccccceehhhhhhhhhHH
Confidence 34699999999999999998887654322111 22334455555544443
No 205
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.56 E-value=0.19 Score=46.17 Aligned_cols=22 Identities=45% Similarity=0.662 Sum_probs=19.1
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|+|+|.+|+|||||...+.++
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHcC
Confidence 3789999999999999987754
No 206
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=85.55 E-value=0.22 Score=44.20 Aligned_cols=28 Identities=29% Similarity=0.352 Sum_probs=24.1
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccccc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDKSL 233 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~~~ 233 (1112)
..-+|.+.|.=|+||||+++.+++...+
T Consensus 32 ~g~ii~L~G~LGaGKTtfvr~~~~~lg~ 59 (158)
T d1htwa_ 32 KAIMVYLNGDLGAGKTTLTRGMLQGIGH 59 (158)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHTTC
T ss_pred CCeEEEEecCCCccHHHHHHHHHhhccc
Confidence 3469999999999999999999987643
No 207
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.32 E-value=0.19 Score=46.01 Aligned_cols=22 Identities=32% Similarity=0.539 Sum_probs=19.1
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.|+|.+|+|||+|...+.++
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4778999999999999987764
No 208
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.30 E-value=0.2 Score=45.59 Aligned_cols=22 Identities=27% Similarity=0.539 Sum_probs=19.0
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|.++|.+|+|||+|...+..+.
T Consensus 6 ivvvG~~~vGKTsli~r~~~~~ 27 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQGI 27 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6789999999999999887653
No 209
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.24 E-value=0.19 Score=46.12 Aligned_cols=22 Identities=27% Similarity=0.505 Sum_probs=18.9
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.++|.+|+|||||+..+..+
T Consensus 7 KI~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3789999999999999987654
No 210
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.99 E-value=0.21 Score=45.86 Aligned_cols=22 Identities=27% Similarity=0.542 Sum_probs=19.2
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.|+|..|+|||||+..+.++
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3789999999999999987664
No 211
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=84.93 E-value=0.32 Score=46.05 Aligned_cols=36 Identities=17% Similarity=0.392 Sum_probs=27.8
Q ss_pred hHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 186 DKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 186 ~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
.++.+.++|.. +..+++|.+|+|||||..++..+..
T Consensus 85 g~~~L~~~l~~-----------kt~~~~G~SGVGKSTLiN~L~~~~~ 120 (225)
T d1u0la2 85 GIEELKEYLKG-----------KISTMAGLSGVGKSSLLNAINPGLK 120 (225)
T ss_dssp THHHHHHHHSS-----------SEEEEECSTTSSHHHHHHHHSTTCC
T ss_pred hHhhHHHHhcC-----------CeEEEECCCCCCHHHHHHhhcchhh
Confidence 36677777732 3678999999999999999976543
No 212
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.85 E-value=0.25 Score=44.95 Aligned_cols=23 Identities=35% Similarity=0.572 Sum_probs=19.7
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.-|+|+|..|+|||||...+.++
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 45778999999999999987654
No 213
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=84.84 E-value=0.28 Score=50.92 Aligned_cols=25 Identities=28% Similarity=0.422 Sum_probs=20.9
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
...-+-.+|+.|+|||.||+.++..
T Consensus 67 p~~niLfiGPTGvGKTElAk~LA~~ 91 (364)
T d1um8a_ 67 SKSNILLIGPTGSGKTLMAQTLAKH 91 (364)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHH
T ss_pred CCcceeeeCCCCccHHHHHHHHHhh
Confidence 3455788899999999999998764
No 214
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=84.76 E-value=0.24 Score=48.08 Aligned_cols=37 Identities=30% Similarity=0.213 Sum_probs=26.7
Q ss_pred EEEEEE-ccCCCcHHHHHHHHhccccccccCCCCceeEEEEeC
Q 047598 208 RVIPIV-GMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCIS 249 (1112)
Q Consensus 208 ~vv~I~-G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~ 249 (1112)
+||+|+ +-||+||||+|..+....... -..++-+...
T Consensus 3 ~vIav~~~kGGvGKTtia~nLA~~la~~-----g~~VlliD~D 40 (237)
T d1g3qa_ 3 RIISIVSGKGGTGKTTVTANLSVALGDR-----GRKVLAVDGD 40 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHT-----TCCEEEEECC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhC-----CCCEEEEeCC
Confidence 689999 779999999998887655422 2345566654
No 215
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.73 E-value=0.21 Score=45.41 Aligned_cols=21 Identities=33% Similarity=0.694 Sum_probs=18.9
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|.++|.+|+|||||...+.++
T Consensus 6 i~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 778999999999999988765
No 216
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=84.68 E-value=0.16 Score=47.06 Aligned_cols=21 Identities=24% Similarity=0.471 Sum_probs=19.1
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|+|+|.+|+|||||...+.+.
T Consensus 4 VaivG~~nvGKSTLin~L~~~ 24 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTRA 24 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCSS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 899999999999999998754
No 217
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=84.67 E-value=0.18 Score=48.62 Aligned_cols=22 Identities=32% Similarity=0.579 Sum_probs=20.3
Q ss_pred EEEEEEccCCCcHHHHHHHHhc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~ 229 (1112)
.+++|+|..|.|||||.+.+..
T Consensus 26 ei~~iiG~nGaGKSTLl~~l~G 47 (231)
T d1l7vc_ 26 EILHLVGPNGAGKSTLLARMAG 47 (231)
T ss_dssp CEEECBCCTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCcHHHHHHHHhC
Confidence 4999999999999999999876
No 218
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=84.56 E-value=0.25 Score=45.73 Aligned_cols=25 Identities=36% Similarity=0.573 Sum_probs=19.9
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
...+ |.++|.+|+|||||...+...
T Consensus 16 k~~K-I~lvG~~~vGKTsLi~~l~~~ 40 (182)
T d1moza_ 16 KELR-ILILGLDGAGKTTILYRLQIG 40 (182)
T ss_dssp SCEE-EEEEEETTSSHHHHHHHTCCS
T ss_pred ceEE-EEEECCCCCCHHHHHHHHhcC
Confidence 3455 559999999999999987554
No 219
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.42 E-value=0.22 Score=45.86 Aligned_cols=23 Identities=35% Similarity=0.356 Sum_probs=19.4
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-|.|+|.+|+|||+|...+.++.
T Consensus 4 KivvvG~~~vGKTsLi~~~~~~~ 26 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNSKDQ 26 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 46788999999999998877653
No 220
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.41 E-value=0.23 Score=45.28 Aligned_cols=21 Identities=24% Similarity=0.517 Sum_probs=18.3
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|+|+|..|+|||+|...+..+
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 568999999999999987765
No 221
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=84.19 E-value=0.52 Score=46.01 Aligned_cols=59 Identities=14% Similarity=0.115 Sum_probs=36.9
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhcccccccc-----------CCCCceeEEEEeCCCCCHHHHHHHHHHHh
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDKSLNAK-----------DFKFDIKAWVCISDVFDVLSISKALLESI 265 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~-----------~~~F~~~~wv~~~~~~~~~~~~~~il~~l 265 (1112)
.-.++.|.|.+|+|||++|.+++.+...... ......++|++.....+.. ..+.+.+.+
T Consensus 33 ~G~l~~i~G~~G~GKT~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~~~~~-~~~~~~~~~ 102 (258)
T d2i1qa2 33 SQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPE-RIMQMAEHA 102 (258)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHTTCGGGEECCTTTSCTTTTSSEEEEEEESSSCCCHH-HHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHhcCCCceEEeecccchhcCceEEEEEecCCcCHH-HHHHHHhhc
Confidence 4579999999999999999998765432200 0112356788776555533 333444444
No 222
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=83.92 E-value=0.25 Score=45.40 Aligned_cols=22 Identities=32% Similarity=0.460 Sum_probs=18.9
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.|+|.+|+|||||..++...
T Consensus 17 kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 17 KVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4669999999999999987664
No 223
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.88 E-value=0.25 Score=44.48 Aligned_cols=23 Identities=35% Similarity=0.556 Sum_probs=19.8
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-|+++|.+|+|||||...+.+..
T Consensus 2 KI~liG~~nvGKSSLln~l~~~~ 24 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKNDR 24 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 37899999999999999887653
No 224
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.87 E-value=0.24 Score=46.47 Aligned_cols=23 Identities=30% Similarity=0.540 Sum_probs=19.7
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-|+|+|.+|+|||||+..+.++.
T Consensus 8 KivvvG~~~vGKTsli~~l~~~~ 30 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFSDDT 30 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCcCHHHHHHHHhhCC
Confidence 37799999999999999887653
No 225
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.84 E-value=0.26 Score=45.00 Aligned_cols=22 Identities=36% Similarity=0.504 Sum_probs=19.2
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|+|+|.+|+|||+|+..+.+.
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4889999999999999987664
No 226
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.79 E-value=0.24 Score=45.98 Aligned_cols=23 Identities=39% Similarity=0.404 Sum_probs=19.7
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-|.|+|.+|+|||+|...+.++.
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~~~~ 33 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYANDA 33 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHhhCC
Confidence 37899999999999999877653
No 227
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=83.56 E-value=0.26 Score=45.63 Aligned_cols=22 Identities=32% Similarity=0.436 Sum_probs=19.8
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|+|+|.+|+|||||...+.+.
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999864
No 228
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.53 E-value=0.28 Score=44.83 Aligned_cols=22 Identities=36% Similarity=0.498 Sum_probs=18.9
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.++|.+|+|||+|+..+...
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~~ 26 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAGV 26 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHCC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4679999999999999988653
No 229
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.41 E-value=0.34 Score=44.79 Aligned_cols=23 Identities=30% Similarity=0.315 Sum_probs=19.8
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-|.|+|.+|+|||+|..++.++.
T Consensus 7 KivviG~~~vGKTsli~~~~~~~ 29 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTNA 29 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHhCC
Confidence 47899999999999998887653
No 230
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=83.31 E-value=0.28 Score=44.65 Aligned_cols=24 Identities=33% Similarity=0.587 Sum_probs=20.3
Q ss_pred eEEEEEEccCCCcHHHHHHHHhcc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
..-|.|+|.+|+|||||+..+.++
T Consensus 4 ~~KivlvG~~~vGKTsli~~~~~~ 27 (168)
T d1u8za_ 4 LHKVIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHS
T ss_pred eeEEEEECCCCcCHHHHHHHHHhC
Confidence 446789999999999999987654
No 231
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=83.12 E-value=0.29 Score=44.32 Aligned_cols=22 Identities=27% Similarity=0.486 Sum_probs=18.5
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|.++|.+|+|||||...+....
T Consensus 5 i~i~G~~~~GKTsLl~~l~~~~ 26 (164)
T d1zd9a1 5 LTLVGLQYSGKTTFVNVIASGQ 26 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 5688999999999999886643
No 232
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.10 E-value=0.3 Score=46.31 Aligned_cols=22 Identities=36% Similarity=0.404 Sum_probs=20.1
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.|+|+|.+|+|||||...+.+.
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 7899999999999999998765
No 233
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=83.04 E-value=1.6 Score=37.46 Aligned_cols=53 Identities=21% Similarity=0.235 Sum_probs=33.8
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCCHHHHHHHHHHHhc
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFDVLSISKALLESIT 266 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~~~~~~~~il~~l~ 266 (1112)
+..++..|+++.|.|||+++-.++.. ...++.+.+....-..+..+.+.+.+.
T Consensus 6 ~~~~~~ll~apTGsGKT~~~~~~~~~---------~~~~vli~~P~~~l~~q~~~~~~~~~~ 58 (136)
T d1a1va1 6 QSFQVAHLHAPTGSGKSTKVPAAYAA---------QGYKVLVLNPSVAATLGFGAYMSKAHG 58 (136)
T ss_dssp SSCEEEEEECCTTSCTTTHHHHHHHT---------TTCCEEEEESCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEEeCCCCCHHHHHHHHHHH---------cCCcEEEEcChHHHHHHHHHHHHHHhh
Confidence 34678899999999999998776643 223466666554444444444444443
No 234
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=82.92 E-value=0.29 Score=45.33 Aligned_cols=21 Identities=43% Similarity=0.670 Sum_probs=18.7
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|.++|.+|+|||||+..+.+.
T Consensus 5 v~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999988764
No 235
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=82.89 E-value=0.99 Score=44.36 Aligned_cols=101 Identities=17% Similarity=0.172 Sum_probs=51.6
Q ss_pred HHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcccccccc---CCCCceeEEEEeCCCCCH-HHHHHHHHHH
Q 047598 189 RILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDKSLNAK---DFKFDIKAWVCISDVFDV-LSISKALLES 264 (1112)
Q Consensus 189 ~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~---~~~F~~~~wv~~~~~~~~-~~~~~~il~~ 264 (1112)
+.++.+..- ..-+-++|.|.+|+|||+|+..+......... ...=..++++-+++.... .++.+.+.+.
T Consensus 57 raID~l~pi-------g~GQr~~If~~~g~GKt~ll~~~~~~~~~~~~~~~~~~~~~~v~~~IGer~~E~~e~~~~~~~~ 129 (285)
T d2jdia3 57 KAVDSLVPI-------GRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDA 129 (285)
T ss_dssp HHHHHHSCC-------BTTCBCEEEESTTSSHHHHHHHHHHHTHHHHTSSCTTTCCEEEEEEESCCHHHHHHHHHHHHHT
T ss_pred eEEecccCc-------cCCCEEEeecCCCCChHHHHHHHHHhHHhhccccccccceEEEEeeeCccHHHHHHHHHHhccc
Confidence 456666541 12235789999999999998776654321100 011124566667666533 3344443332
Q ss_pred hcCC-------CCCCCChH---------HHHHHHHHHhCCCcEEEEEeCC
Q 047598 265 ITRK-------PCHLNTLN---------EVQVDLKTAVDGKRFLLVLDDV 298 (1112)
Q Consensus 265 l~~~-------~~~~~~~~---------~~~~~l~~~l~~kr~LlVlDdv 298 (1112)
-... ..+..... ...+.+++ ++|.+|+++||+
T Consensus 130 ~~~~~tvvv~~ts~~~~~~r~~~~~~a~tiAEyfrd--~G~~VLll~Dsl 177 (285)
T d2jdia3 130 DAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRD--NGKHALIIYDDL 177 (285)
T ss_dssp TCGGGEEEEEECTTSCHHHHHHHHHHHHHHHHHHHH--TTCEEEEEEETH
T ss_pred ccccceEEEEECCCCCHHHHHHHHHHHHHHHHHHHH--cCCcEEEEEcCh
Confidence 1110 00111111 11222332 689999999998
No 236
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.87 E-value=0.28 Score=46.51 Aligned_cols=23 Identities=26% Similarity=0.426 Sum_probs=20.1
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-|+|+|.+|+|||||..++....
T Consensus 2 ~V~ivG~~~~GKTsLl~~l~~~~ 24 (207)
T d2fh5b1 2 AVLFVGLCDSGKTLLFVRLLTGQ 24 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 58999999999999999887643
No 237
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=82.85 E-value=0.28 Score=45.82 Aligned_cols=21 Identities=19% Similarity=0.378 Sum_probs=18.2
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|.++|-+|+|||+|.+.+..+
T Consensus 5 ivllG~~~vGKTsl~~r~~~~ 25 (195)
T d1svsa1 5 LLLLGAGESGKSTIVKQMKII 25 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhhC
Confidence 679999999999999887544
No 238
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.83 E-value=0.3 Score=44.92 Aligned_cols=21 Identities=43% Similarity=0.689 Sum_probs=18.6
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|.++|.+|+|||||...+.++
T Consensus 10 i~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 779999999999999987654
No 239
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=82.83 E-value=0.21 Score=46.38 Aligned_cols=22 Identities=36% Similarity=0.511 Sum_probs=19.4
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|+|+|.+|+|||||..++.+.
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~~ 24 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSSA 24 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEEE
T ss_pred eEEEECCCCCCHHHHHHHHhCC
Confidence 3899999999999999998654
No 240
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.81 E-value=0.3 Score=44.76 Aligned_cols=22 Identities=27% Similarity=0.528 Sum_probs=19.0
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.++|.+|+|||||+..+.++
T Consensus 8 KI~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4789999999999999887654
No 241
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.60 E-value=0.31 Score=44.39 Aligned_cols=22 Identities=32% Similarity=0.632 Sum_probs=18.9
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|.++|..|+|||||...+.++.
T Consensus 7 i~lvG~~~vGKTsll~~~~~~~ 28 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQKI 28 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 5678999999999999988653
No 242
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.50 E-value=0.29 Score=45.06 Aligned_cols=22 Identities=36% Similarity=0.416 Sum_probs=19.0
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|.++|..|+|||+|++.+.+..
T Consensus 5 ivliG~~~vGKTsli~r~~~~~ 26 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKDC 26 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 5689999999999999887753
No 243
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.48 E-value=0.19 Score=45.93 Aligned_cols=22 Identities=32% Similarity=0.528 Sum_probs=17.5
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.++|.+|+|||+|...+.++
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC--
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3678899999999999887654
No 244
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.45 E-value=0.29 Score=45.93 Aligned_cols=19 Identities=26% Similarity=0.524 Sum_probs=17.0
Q ss_pred EEEEEccCCCcHHHHHHHH
Q 047598 209 VIPIVGMAGVGKTTLAREV 227 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v 227 (1112)
-|.|+|.+|+|||||...+
T Consensus 4 KivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 3679999999999999887
No 245
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=82.00 E-value=0.25 Score=45.19 Aligned_cols=26 Identities=27% Similarity=0.470 Sum_probs=21.2
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
...+ |.++|.+|+|||||...+.+..
T Consensus 11 k~~k-IvlvG~~~vGKTSli~rl~~~~ 36 (173)
T d1e0sa_ 11 KEMR-ILMLGLDAAGKTTILYKLKLGQ 36 (173)
T ss_dssp CCEE-EEEEEETTSSHHHHHHHTTCCC
T ss_pred CeEE-EEEECCCCCCHHHHHHHHhcCC
Confidence 4566 5589999999999999987654
No 246
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.99 E-value=0.34 Score=44.38 Aligned_cols=24 Identities=21% Similarity=0.331 Sum_probs=20.0
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
--|+++|.+|+|||||...+.+..
T Consensus 6 ~ki~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 6 LRLGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHhCC
Confidence 356799999999999999887653
No 247
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=81.86 E-value=0.34 Score=43.58 Aligned_cols=21 Identities=24% Similarity=0.425 Sum_probs=18.7
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|+|+|.+|+|||||..++...
T Consensus 4 I~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 4 VVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEESTTSSHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 679999999999999998754
No 248
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=81.84 E-value=0.35 Score=44.77 Aligned_cols=25 Identities=36% Similarity=0.635 Sum_probs=20.7
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
..+ |+|+|..|+|||||..++.+..
T Consensus 8 ~~k-V~iiG~~~~GKSTLin~l~~~~ 32 (186)
T d1mkya2 8 AIK-VAIVGRPNVGKSTLFNAILNKE 32 (186)
T ss_dssp CEE-EEEECSTTSSHHHHHHHHHTST
T ss_pred CCE-EEEECCCCCCHHHHHHHHHCCC
Confidence 355 7899999999999999887643
No 249
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.66 E-value=0.32 Score=45.31 Aligned_cols=22 Identities=36% Similarity=0.409 Sum_probs=18.6
Q ss_pred EEEEccCCCcHHHHHHHHhccc
Q 047598 210 IPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
|+++|.+|+|||+|+..+.++.
T Consensus 6 vvllG~~~vGKTSli~r~~~~~ 27 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTNK 27 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6688999999999998877643
No 250
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=80.87 E-value=5 Score=37.93 Aligned_cols=111 Identities=14% Similarity=0.059 Sum_probs=55.2
Q ss_pred eEEEEEEccCCCcHHHHHHHHhcccccc----------ccCCCCceeEEEEeCCCCCHHHHHHHHHHHhcCCCCCCCChH
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDKSLN----------AKDFKFDIKAWVCISDVFDVLSISKALLESITRKPCHLNTLN 276 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~~~~----------~~~~~F~~~~wv~~~~~~~~~~~~~~il~~l~~~~~~~~~~~ 276 (1112)
.+++.|.|+.+.||||+.+.+.--.-.. ..-..|+ .++..+....++..- .....
T Consensus 41 ~~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d-~I~~~~~~~d~~~~~--------------~S~F~ 105 (234)
T d1wb9a2 41 RRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPID-RIFTRVGAADDLASG--------------RSTFM 105 (234)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCC-EEEEEEC-------------------------CH
T ss_pred ceEEEEeccCchhhHHHHHHHHHHHHHHHcCCeEecCceecccch-hheeEEccCcccccc--------------hhHHH
Confidence 4689999999999999998876532110 0001222 233334333222111 01111
Q ss_pred HHHHHHHHHh--CCCcEEEEEeCCCCCC-hhhHH----HHHhcccCCCCCcEEEEEcCChhhhh
Q 047598 277 EVQVDLKTAV--DGKRFLLVLDDVWNED-YSLWV----DLKAPLLAAAPNSKMIITTRHSHVAS 333 (1112)
Q Consensus 277 ~~~~~l~~~l--~~kr~LlVlDdv~~~~-~~~~~----~l~~~l~~~~~gs~iivTTR~~~v~~ 333 (1112)
.-..++.+.+ .+++.|+++|.+-... ..+=. .+...+.. ..++.+++||-...+..
T Consensus 106 ~E~~~~~~il~~~~~~sLvliDE~~~gT~~~eg~~l~~a~l~~l~~-~~~~~~i~tTH~~~l~~ 168 (234)
T d1wb9a2 106 VEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLAN-KIKALTLFATHYFELTQ 168 (234)
T ss_dssp HHHHHHHHHHHHCCTTEEEEEESCCCCSSSSHHHHHHHHHHHHHHH-TTCCEEEEECSCGGGGG
T ss_pred HHHHHHHHHHHhcccccEEeecccccCCChhhhhHHHHHhhhhhhc-cccceEEEecchHHHhh
Confidence 1122222222 4678999999996522 11111 12222322 34678999998876654
No 251
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=80.75 E-value=0.41 Score=43.31 Aligned_cols=23 Identities=35% Similarity=0.419 Sum_probs=19.9
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
+-|.|.|.+|+||||+|..+..+
T Consensus 15 ~gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 15 LGVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 45789999999999999987764
No 252
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=79.79 E-value=0.45 Score=43.05 Aligned_cols=23 Identities=26% Similarity=0.465 Sum_probs=19.7
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
+-|.|.|.+|+||||+|..+..+
T Consensus 16 ~gvli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 16 VGVLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp EEEEEEESSSSSHHHHHHHHHTT
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc
Confidence 45789999999999999888764
No 253
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.78 E-value=0.36 Score=45.18 Aligned_cols=22 Identities=18% Similarity=0.315 Sum_probs=18.7
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.++|.+|+|||+|...+..+
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~ 25 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRII 25 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3678999999999999988554
No 254
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.74 E-value=0.28 Score=44.85 Aligned_cols=22 Identities=32% Similarity=0.498 Sum_probs=8.6
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.|+|-+|+|||||...+..+
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~ 29 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFSED 29 (173)
T ss_dssp EEEEECCCCC------------
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3678999999999999877653
No 255
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=78.86 E-value=1 Score=44.00 Aligned_cols=41 Identities=22% Similarity=0.406 Sum_probs=28.7
Q ss_pred hhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 185 KDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 185 ~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
..+.++...+.. .....--|+++|..|+|||||...++.+.
T Consensus 16 ~~l~e~~~~l~~------~~~~~l~I~LvG~tg~GKSSliN~ilg~~ 56 (257)
T d1h65a_ 16 TKLLELLGNLKQ------EDVNSLTILVMGKGGVGKSSTVNSIIGER 56 (257)
T ss_dssp HHHHHHHHHHHH------TTCCEEEEEEEESTTSSHHHHHHHHHTSC
T ss_pred HHHHHHHHHHhh------cCCCCcEEEEECCCCCcHHHHHHHHhCCC
Confidence 344555555554 12234457799999999999999998764
No 256
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=78.51 E-value=0.48 Score=45.31 Aligned_cols=22 Identities=18% Similarity=0.401 Sum_probs=18.8
Q ss_pred EEEEEEccCCCcHHHHHHHHhc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~ 229 (1112)
.-|.++|.+|+|||||.+.+..
T Consensus 7 ~KilllG~~~vGKTsll~~~~~ 28 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRI 28 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhc
Confidence 3568999999999999988754
No 257
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=78.48 E-value=0.37 Score=44.54 Aligned_cols=26 Identities=15% Similarity=0.219 Sum_probs=21.6
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
....-|+|+|.+++|||||..++...
T Consensus 14 ~~~~~I~lvG~~NvGKSSL~n~L~~~ 39 (188)
T d1puia_ 14 DTGIEVAFAGRSNAGKSSALNTLTNQ 39 (188)
T ss_dssp SCSEEEEEEECTTSSHHHHHTTTCCC
T ss_pred ccCCEEEEECCCCCCHHHHHHHHhCC
Confidence 34567899999999999999887654
No 258
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=78.37 E-value=0.51 Score=42.40 Aligned_cols=23 Identities=30% Similarity=0.424 Sum_probs=19.8
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
+-|.|.|.+|+||||+|..+..+
T Consensus 16 ~gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 16 VGVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 46789999999999999887765
No 259
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=76.74 E-value=0.58 Score=46.42 Aligned_cols=23 Identities=30% Similarity=0.395 Sum_probs=19.3
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.+..|+|.+|+||||+|.+++-.
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~~ 52 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAAQ 52 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHH
Confidence 37789999999999999777654
No 260
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=76.34 E-value=0.64 Score=45.67 Aligned_cols=26 Identities=27% Similarity=0.300 Sum_probs=22.3
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.++|-|+|+|-+|.|||||+.++...
T Consensus 4 ~~iRni~i~gh~~~GKTtL~e~ll~~ 29 (276)
T d2bv3a2 4 KRLRNIGIAAHIDAGKTTTTERILYY 29 (276)
T ss_dssp GGEEEEEEEECTTSCHHHHHHHHHHH
T ss_pred hhceEEEEEeCCCCCHHHHHHHHHHh
Confidence 45788999999999999999887543
No 261
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=76.30 E-value=0.56 Score=49.87 Aligned_cols=24 Identities=38% Similarity=0.546 Sum_probs=20.6
Q ss_pred EEEEEccCCCcHHHHHHHHhcccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
=|-++|+.|+|||.||+.+++...
T Consensus 51 NILliGPTGvGKTlLAr~LAk~l~ 74 (443)
T d1g41a_ 51 NILMIGPTGVGKTEIARRLAKLAN 74 (443)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHTT
T ss_pred cEEEECCCCCCHHHHHHHHHHHhC
Confidence 367899999999999999998543
No 262
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=75.91 E-value=0.77 Score=46.50 Aligned_cols=26 Identities=31% Similarity=0.400 Sum_probs=22.9
Q ss_pred eEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
+-.|+|-|.-|+||||+++.+.+...
T Consensus 6 ~~rI~iEG~iGsGKSTl~~~L~~~l~ 31 (333)
T d1p6xa_ 6 IVRIYLDGVYGIGKSTTGRVMASAAS 31 (333)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHSGGG
T ss_pred eEEEEEECCccCCHHHHHHHHHHHhc
Confidence 56789999999999999999998754
No 263
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=75.80 E-value=0.65 Score=44.80 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=27.1
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCC
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDV 251 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~ 251 (1112)
.-.++.|.|.+|+|||++|.++....... .-..++|++....
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~~~~~~----~~~~~~~~s~e~~ 66 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLYNGIIE----FDEPGVFVTFEET 66 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHH----HCCCEEEEESSSC
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHh----cCCCcccccccCC
Confidence 34689999999999999997754332111 1124566665543
No 264
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=75.68 E-value=0.68 Score=44.04 Aligned_cols=24 Identities=21% Similarity=0.271 Sum_probs=19.7
Q ss_pred EEEEEEccC-CCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMA-GVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~g-GiGKTtLa~~v~~~~ 231 (1112)
+.+.|.|-| |+||||++-.+..-.
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aL 26 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAA 26 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHH
T ss_pred ceEEEEECCCCccHHHHHHHHHHHH
Confidence 567899998 999999987776543
No 265
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=75.33 E-value=5.1 Score=36.03 Aligned_cols=22 Identities=32% Similarity=0.356 Sum_probs=19.7
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|+|+|..++|||||..++...
T Consensus 7 nIaiiG~~naGKSTL~n~L~~~ 28 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTEI 28 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHTT
T ss_pred EEEEEeCCCCcHHHHHHHHHHh
Confidence 5899999999999999998753
No 266
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=75.20 E-value=0.65 Score=46.83 Aligned_cols=25 Identities=28% Similarity=0.250 Sum_probs=20.8
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
+..|+|-|.-|+||||+++.+.+..
T Consensus 4 ~lrI~IEG~iGsGKTTl~~~La~~l 28 (329)
T d1e2ka_ 4 LLRVYIDGPHGMGKTTTTQLLVALG 28 (329)
T ss_dssp EEEEEECSCTTSSHHHHHHHHTC--
T ss_pred ceEEEEECCcCCCHHHHHHHHHHHh
Confidence 4569999999999999999997653
No 267
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=74.07 E-value=0.85 Score=44.57 Aligned_cols=22 Identities=45% Similarity=0.761 Sum_probs=19.7
Q ss_pred eEEEEEEccCCCcHHHHHHHHh
Q 047598 207 FRVIPIVGMAGVGKTTLAREVY 228 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~ 228 (1112)
+|-|+|+|-.|.|||||+.++.
T Consensus 2 iRNv~iiGh~~~GKTtL~e~ll 23 (267)
T d2dy1a2 2 IRTVALVGHAGSGKTTLTEALL 23 (267)
T ss_dssp EEEEEEEESTTSSHHHHHHHHH
T ss_pred eeEEEEEcCCCCcHHHHHHHHH
Confidence 5789999999999999998874
No 268
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=72.92 E-value=0.28 Score=44.08 Aligned_cols=21 Identities=43% Similarity=0.683 Sum_probs=19.0
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|+++|.+|+|||||..++...
T Consensus 3 I~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999998754
No 269
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=72.03 E-value=1 Score=44.82 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=18.6
Q ss_pred EEEEEEccCCCcHHHHHHHHh
Q 047598 208 RVIPIVGMAGVGKTTLAREVY 228 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~ 228 (1112)
++.+|+|..|+||||+..+++
T Consensus 24 ~ln~IvG~NGsGKStiL~Ai~ 44 (292)
T g1f2t.1 24 GINLIIGQNGSGKSSLLDAIL 44 (292)
T ss_dssp EEEEEECCTTSSHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHH
Confidence 577899999999999998875
No 270
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.21 E-value=1.7 Score=42.59 Aligned_cols=27 Identities=30% Similarity=0.455 Sum_probs=24.2
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.++.||+|+|.-+.|||||+..++...
T Consensus 30 ~~v~vvsi~G~~~sGKS~llN~l~~~~ 56 (277)
T d1f5na2 30 QPMVVVAIVGLYRTGKSYLMNKLAGKK 56 (277)
T ss_dssp SBEEEEEEEEBTTSSHHHHHHHHTTCS
T ss_pred CCEEEEEEECCCCCCHHHHHHHHcCCC
Confidence 469999999999999999999998753
No 271
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=70.75 E-value=0.96 Score=45.73 Aligned_cols=23 Identities=26% Similarity=0.361 Sum_probs=20.1
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
-|.|.|..|+||||+.+++....
T Consensus 168 nili~G~tgSGKTT~l~al~~~i 190 (323)
T d1g6oa_ 168 NVIVCGGTGSGKTTYIKSIMEFI 190 (323)
T ss_dssp CEEEEESTTSSHHHHHHHHGGGS
T ss_pred CEEEEeeccccchHHHHHHhhhc
Confidence 37889999999999999998754
No 272
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=70.38 E-value=1.3 Score=40.59 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=28.3
Q ss_pred HHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 187 KARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 187 ~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
+..+..+|.. .+....+.|+|+++.|||++|..+.+-
T Consensus 40 l~~l~~~l~~-------~PKkn~i~~~GP~~TGKS~f~~sl~~~ 76 (205)
T d1tuea_ 40 LGALKSFLKG-------TPKKNCLVFCGPANTGKSYFGMSFIHF 76 (205)
T ss_dssp HHHHHHHHHT-------CTTCSEEEEESCGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHcC-------CCCceEEEEECCCCccHHHHHHHHHHH
Confidence 4555666643 456679999999999999999887664
No 273
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=68.42 E-value=2.1 Score=41.69 Aligned_cols=27 Identities=26% Similarity=0.271 Sum_probs=23.0
Q ss_pred CCCeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 204 DANFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 204 ~~~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.+....+.++|.|+.|||+++..+.+-
T Consensus 101 ~~k~n~~~l~G~~~tGKS~f~~~i~~~ 127 (267)
T d1u0ja_ 101 FGKRNTIWLFGPATTGKTNIAEAIAHT 127 (267)
T ss_dssp STTCCEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCccEEEEEEcCCCCCHHHHHHHHHHH
Confidence 355678999999999999999988764
No 274
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=67.46 E-value=0.99 Score=45.61 Aligned_cols=26 Identities=35% Similarity=0.381 Sum_probs=22.2
Q ss_pred eEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
+-.|+|-|.-|+||||+++.+.+...
T Consensus 5 ~lrI~IEG~iGsGKSTl~~~L~~~l~ 30 (331)
T d1osna_ 5 VLRIYLDGAYGIGKTTAAEEFLHHFA 30 (331)
T ss_dssp EEEEEEEESSSSCTTHHHHHHHHTTT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHh
Confidence 34589999999999999999988654
No 275
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=67.33 E-value=0.54 Score=44.59 Aligned_cols=23 Identities=26% Similarity=0.468 Sum_probs=18.6
Q ss_pred EEEEEccCCCcHHHHHHHHhccc
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
...++|.+|+|||||..++..+.
T Consensus 99 ~~vl~G~SGVGKSSLiN~L~~~~ 121 (231)
T d1t9ha2 99 TTVFAGQSGVGKSSLLNAISPEL 121 (231)
T ss_dssp EEEEEESHHHHHHHHHHHHCC--
T ss_pred eEEEECCCCccHHHHHHhhccHh
Confidence 45688999999999999997654
No 276
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=66.96 E-value=1.4 Score=41.96 Aligned_cols=23 Identities=26% Similarity=0.494 Sum_probs=19.9
Q ss_pred EEEEEEccCCCcHHHHHHHHhcc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.+|+|+|-.+.|||||+..+...
T Consensus 6 p~IaIiGh~d~GKSTL~~~L~~~ 28 (227)
T d1g7sa4 6 PIVSVLGHVDHGKTTLLDHIRGS 28 (227)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEEeCCCccHHHHHHHHHhh
Confidence 36999999999999999887653
No 277
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=66.51 E-value=10 Score=35.30 Aligned_cols=107 Identities=18% Similarity=0.121 Sum_probs=56.1
Q ss_pred EEEEEccCCCcHHHHHHHHhccccc----------cccCCCCceeEEEEeCCCCCHHHHHHHHHHHhcCCCCCCCChHHH
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDKSL----------NAKDFKFDIKAWVCISDVFDVLSISKALLESITRKPCHLNTLNEV 278 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~~~----------~~~~~~F~~~~wv~~~~~~~~~~~~~~il~~l~~~~~~~~~~~~~ 278 (1112)
++.|.|+...||||+.+.+.--.-. ...-..|+. ++..+....++.. +......-
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA~~~~i~~~d~-I~~~~~~~d~~~~--------------~~StF~~e 101 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDG-IYTRIGASDDLAG--------------GKSTFMVE 101 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCSE-EEEECCC--------------------CCSHHHHH
T ss_pred EEEEECCCccccchhhhhhHHHHHHHhccceeecCceEEeecce-EEEEECCCccccC--------------CccHHHHh
Confidence 7889999999999999887543210 000022332 3334433322211 11122222
Q ss_pred HHHHHHHh--CCCcEEEEEeCCCCCCh-h-----hHHHHHhcccCCCCCcEEEEEcCChhhhh
Q 047598 279 QVDLKTAV--DGKRFLLVLDDVWNEDY-S-----LWVDLKAPLLAAAPNSKMIITTRHSHVAS 333 (1112)
Q Consensus 279 ~~~l~~~l--~~kr~LlVlDdv~~~~~-~-----~~~~l~~~l~~~~~gs~iivTTR~~~v~~ 333 (1112)
..++...+ .+++.|+++|.+-.... . .| .+...+.. .++.+++||-..++..
T Consensus 102 l~~~~~il~~~~~~sLvliDE~~~gT~~~eg~ala~-aile~L~~--~~~~~i~tTH~~eL~~ 161 (224)
T d1ewqa2 102 MEEVALILKEATENSLVLLDEVGRGTSSLDGVAIAT-AVAEALHE--RRAYTLFATHYFELTA 161 (224)
T ss_dssp HHHHHHHHHHCCTTEEEEEESTTTTSCHHHHHHHHH-HHHHHHHH--HTCEEEEECCCHHHHT
T ss_pred HHHHHHHhccCCCCcEEeecccccCcchhhhcchHH-HHHHHHhh--cCcceEEeeechhhhh
Confidence 22333333 36789999999975331 1 12 22333332 4778999999877764
No 278
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=62.44 E-value=4 Score=42.45 Aligned_cols=26 Identities=23% Similarity=0.307 Sum_probs=22.1
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
...+|.|.|+.|+||||....+.+..
T Consensus 157 ~~GliLvtGpTGSGKSTTl~~~l~~~ 182 (401)
T d1p9ra_ 157 PHGIILVTGPTGSGKSTTLYAGLQEL 182 (401)
T ss_dssp SSEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred hhceEEEEcCCCCCccHHHHHHhhhh
Confidence 45799999999999999988877653
No 279
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=61.84 E-value=2 Score=43.86 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=18.6
Q ss_pred EEEEEEccCCCcHHHHHHHHh
Q 047598 208 RVIPIVGMAGVGKTTLAREVY 228 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~ 228 (1112)
.+..|+|..|+||||+..+++
T Consensus 24 ~~~vi~G~NgsGKTtileAI~ 44 (369)
T g1ii8.1 24 GINLIIGQNGSGKSSLLDAIL 44 (369)
T ss_dssp EEEEEECCTTSSHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHH
Confidence 477899999999999998884
No 280
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=59.24 E-value=2.3 Score=39.58 Aligned_cols=20 Identities=30% Similarity=0.414 Sum_probs=17.7
Q ss_pred EEEEccCCCcHHHHHHHHhc
Q 047598 210 IPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~ 229 (1112)
|+|+|-++.|||||+.++..
T Consensus 6 i~iiGhvd~GKSTL~~~Ll~ 25 (204)
T d2c78a3 6 VGTIGHVDHGKTTLTAALTY 25 (204)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHHH
Confidence 78999999999999988753
No 281
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=58.93 E-value=2.2 Score=42.03 Aligned_cols=22 Identities=36% Similarity=0.496 Sum_probs=19.5
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|||+|++.+|||||-.++-+.
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHCC
Confidence 5899999999999999888754
No 282
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.87 E-value=2.9 Score=42.21 Aligned_cols=25 Identities=24% Similarity=0.444 Sum_probs=22.0
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHhc
Q 047598 205 ANFRVIPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 205 ~~~~vv~I~G~gGiGKTtLa~~v~~ 229 (1112)
.++|=|+|+|-.|.|||||+..+..
T Consensus 15 ~~IRNI~iiGhvd~GKTTL~d~Ll~ 39 (341)
T d1n0ua2 15 TNVRNMSVIAHVDHGKSTLTDSLVQ 39 (341)
T ss_dssp GGEEEEEEECCGGGTHHHHHHHHHH
T ss_pred ccCcEEEEEeCCCCcHHHHHHHHHH
Confidence 4688899999999999999987753
No 283
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=57.71 E-value=2.1 Score=43.19 Aligned_cols=16 Identities=38% Similarity=0.493 Sum_probs=13.2
Q ss_pred EEEEccCCCcHHHHHH
Q 047598 210 IPIVGMAGVGKTTLAR 225 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~ 225 (1112)
+.|.|.+|+||||.+-
T Consensus 27 ~lV~g~aGSGKTt~l~ 42 (318)
T d1pjra1 27 LLIMAGAGSGKTRVLT 42 (318)
T ss_dssp EEEEECTTSCHHHHHH
T ss_pred EEEEecCCccHHHHHH
Confidence 5678999999997753
No 284
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=57.07 E-value=2 Score=42.93 Aligned_cols=16 Identities=31% Similarity=0.372 Sum_probs=13.2
Q ss_pred EEEEEccCCCcHHHHH
Q 047598 209 VIPIVGMAGVGKTTLA 224 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa 224 (1112)
.+.|.|.+|+||||++
T Consensus 16 ~~lI~g~aGTGKTt~l 31 (306)
T d1uaaa1 16 PCLVLAGAGSGKTRVI 31 (306)
T ss_dssp EEEECCCTTSCHHHHH
T ss_pred CEEEEeeCCccHHHHH
Confidence 3568899999999764
No 285
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=56.93 E-value=1.1 Score=42.02 Aligned_cols=21 Identities=29% Similarity=0.396 Sum_probs=17.8
Q ss_pred EEEEEccCCCcHHHHHHHHhc
Q 047598 209 VIPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~ 229 (1112)
+.+|+|..|+||||+..++.-
T Consensus 26 ~tvi~G~NGsGKStil~Ai~~ 46 (222)
T d1qhla_ 26 VTTLSGGNGAGKSTTMAAFVT 46 (222)
T ss_dssp HHHHHSCCSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHH
Confidence 556889999999999988863
No 286
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=56.30 E-value=2.9 Score=40.96 Aligned_cols=27 Identities=26% Similarity=0.352 Sum_probs=22.6
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhcccc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDKS 232 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~~ 232 (1112)
..-.|+|+|++.+||+||+..+.....
T Consensus 111 ~~~~v~vvG~PNvGKSsliN~L~~~~~ 137 (273)
T d1puja_ 111 RAIRALIIGIPNVGKSTLINRLAKKNI 137 (273)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTSCC
T ss_pred CceEEEEEecCccchhhhhhhhhccce
Confidence 345689999999999999999987543
No 287
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=55.35 E-value=3.5 Score=40.87 Aligned_cols=22 Identities=41% Similarity=0.594 Sum_probs=19.9
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|||+|.+.+|||||-.++-+.
T Consensus 12 kiGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 12 KTGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp EEEEEECSSSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 4999999999999999999864
No 288
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=54.82 E-value=2.4 Score=43.00 Aligned_cols=21 Identities=29% Similarity=0.561 Sum_probs=18.5
Q ss_pred EEEEEEccCCCcHHHHHHHHh
Q 047598 208 RVIPIVGMAGVGKTTLAREVY 228 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~ 228 (1112)
.+-+|+|..|+||||+..++.
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~ 47 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAIL 47 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHH
Confidence 477899999999999988875
No 289
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=50.43 E-value=3.8 Score=42.60 Aligned_cols=21 Identities=19% Similarity=0.472 Sum_probs=19.0
Q ss_pred EEEEEccCCCcHHHHHHHHhc
Q 047598 209 VIPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~ 229 (1112)
-|+|+|.+|+|||||...+..
T Consensus 58 ~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 58 NVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 479999999999999999874
No 290
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=49.18 E-value=3.7 Score=41.31 Aligned_cols=21 Identities=33% Similarity=0.379 Sum_probs=18.7
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|+|+|.+.+|||||-.++-+.
T Consensus 3 v~lvG~pn~GKStlfn~lt~~ 23 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLV 23 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC-
T ss_pred EeEECCCCCCHHHHHHHHHCC
Confidence 899999999999999998764
No 291
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.86 E-value=5.3 Score=32.85 Aligned_cols=24 Identities=13% Similarity=0.040 Sum_probs=20.5
Q ss_pred EEEEEEccCCCcHHHHHHHHhccc
Q 047598 208 RVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
=.|.+.|..|+||+|+|.++....
T Consensus 7 f~i~~tg~~~~gk~~ia~al~~~l 30 (122)
T d1g8fa3 7 FSIVLGNSLTVSREQLSIALLSTF 30 (122)
T ss_dssp EEEEECTTCCSCHHHHHHHHHHHH
T ss_pred eEEEEeCCCCCCHHHHHHHHHHHH
Confidence 478899999999999999986543
No 292
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=44.51 E-value=6.8 Score=30.88 Aligned_cols=25 Identities=24% Similarity=0.541 Sum_probs=21.5
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
..+-+-++|.||+|.+.||+.+.+.
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~ 31 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNE 31 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHH
T ss_pred hCCEEEEEEECHHHHHHHHHHHHhC
Confidence 4567889999999999999998764
No 293
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=43.54 E-value=5.8 Score=36.29 Aligned_cols=19 Identities=32% Similarity=0.483 Sum_probs=17.2
Q ss_pred EEEEccCCCcHHHHHHHHh
Q 047598 210 IPIVGMAGVGKTTLAREVY 228 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~ 228 (1112)
|+|+|-.+.|||||+.++.
T Consensus 6 i~iiGHvd~GKSTL~~~l~ 24 (196)
T d1d2ea3 6 VGTIGHVDHGKTTLTAAIT 24 (196)
T ss_dssp EEEESSTTSSHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHH
Confidence 7899999999999998774
No 294
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=42.67 E-value=5.5 Score=38.97 Aligned_cols=18 Identities=44% Similarity=0.711 Sum_probs=15.4
Q ss_pred EEEEEEccCCCcHHHHHH
Q 047598 208 RVIPIVGMAGVGKTTLAR 225 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~ 225 (1112)
.|-.+.|.+|.|||||..
T Consensus 15 ~~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 15 DVAVFFGLSGTGKTTLST 32 (313)
T ss_dssp CEEEEECSTTSSHHHHHC
T ss_pred CEEEEEccCCCCccccee
Confidence 366799999999999984
No 295
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=39.92 E-value=5.1 Score=39.78 Aligned_cols=21 Identities=38% Similarity=0.623 Sum_probs=18.2
Q ss_pred EEEEEEccCCCcHHHHHHHHh
Q 047598 208 RVIPIVGMAGVGKTTLAREVY 228 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~~v~ 228 (1112)
++-+|+|.-|+||||+..++.
T Consensus 25 ~lnvlvG~NgsGKS~iL~Ai~ 45 (308)
T d1e69a_ 25 RVTAIVGPNGSGKSNIIDAIK 45 (308)
T ss_dssp SEEEEECCTTTCSTHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHH
Confidence 377899999999999988774
No 296
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=38.90 E-value=6.1 Score=38.82 Aligned_cols=18 Identities=44% Similarity=0.711 Sum_probs=15.7
Q ss_pred EEEEEEccCCCcHHHHHH
Q 047598 208 RVIPIVGMAGVGKTTLAR 225 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~ 225 (1112)
.|..+.|.+|.|||||..
T Consensus 15 ~valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLST 32 (318)
T ss_dssp CEEEEEECTTSCHHHHTC
T ss_pred CEEEEEccCCCCcccccc
Confidence 467889999999999974
No 297
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=38.19 E-value=7.1 Score=38.35 Aligned_cols=16 Identities=50% Similarity=0.814 Sum_probs=14.6
Q ss_pred EEEEEccCCCcHHHHH
Q 047598 209 VIPIVGMAGVGKTTLA 224 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa 224 (1112)
+..+.|.+|.|||||.
T Consensus 16 ~alfFGLSGTGKTTLs 31 (323)
T d1ii2a1 16 VTVFFGLSGTGKTTLS 31 (323)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEEccCCCCcccce
Confidence 5569999999999998
No 298
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=38.18 E-value=7.8 Score=35.32 Aligned_cols=21 Identities=38% Similarity=0.509 Sum_probs=18.3
Q ss_pred EEEEEccCCCcHHHHHHHHhc
Q 047598 209 VIPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~ 229 (1112)
-|+|+|-.+.|||||+.++..
T Consensus 7 nIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEEeccCCcHHHHHHHHHh
Confidence 478999999999999998853
No 299
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.27 E-value=8.1 Score=40.31 Aligned_cols=20 Identities=25% Similarity=0.522 Sum_probs=17.9
Q ss_pred EEEEEccCCCcHHHHHHHHh
Q 047598 209 VIPIVGMAGVGKTTLAREVY 228 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~ 228 (1112)
+-+|+|.-|+|||++..++.
T Consensus 27 l~~i~G~NGsGKS~ileAi~ 46 (427)
T d1w1wa_ 27 FTSIIGPNGSGKSNMMDAIS 46 (427)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 66799999999999998875
No 300
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=37.04 E-value=7.7 Score=36.32 Aligned_cols=20 Identities=25% Similarity=0.448 Sum_probs=17.6
Q ss_pred EEEEccCCCcHHHHHHHHhc
Q 047598 210 IPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~ 229 (1112)
|+|+|-.+.|||||+.++..
T Consensus 6 i~viGHVd~GKTTL~~~Ll~ 25 (224)
T d1jnya3 6 LIVIGHVDHGKSTLVGRLLM 25 (224)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHHH
Confidence 78899999999999987754
No 301
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=35.09 E-value=57 Score=30.05 Aligned_cols=40 Identities=18% Similarity=0.077 Sum_probs=28.2
Q ss_pred chhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhcc
Q 047598 183 RDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 183 r~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
.....++|.+.+.. +.....-++|-.|+|||-+|-.....
T Consensus 60 Q~~~~~~i~~~~~~--------~~~~~~LL~GdvGsGKT~V~~~a~~~ 99 (233)
T d2eyqa3 60 QAQAINAVLSDMCQ--------PLAMDRLVCGDVGFGKTEVAMRAAFL 99 (233)
T ss_dssp HHHHHHHHHHHHHS--------SSCCEEEEECCCCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc--------cCccCeEEEcCCCCCcHHHHHHHHHH
Confidence 34566677777755 23346678899999999998665543
No 302
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=34.24 E-value=7.8 Score=40.66 Aligned_cols=22 Identities=32% Similarity=0.502 Sum_probs=18.0
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-+.|+|..|+|||++++.+..+
T Consensus 52 H~~I~G~tGsGKT~~l~~li~~ 73 (433)
T d1e9ra_ 52 HLLVNGATGTGKSVLLRELAYT 73 (433)
T ss_dssp CEEEEECTTSSHHHHHHHHHHH
T ss_pred eEEEEeCCCCcHHHHHHHHHHH
Confidence 4789999999999998766544
No 303
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=34.00 E-value=9.9 Score=34.91 Aligned_cols=21 Identities=38% Similarity=0.512 Sum_probs=18.8
Q ss_pred EEEEEccCCCcHHHHHHHHhc
Q 047598 209 VIPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~ 229 (1112)
-|+|+|-...|||||+..+..
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHS
T ss_pred EEEEEEccCCcHHHHHHHHHh
Confidence 589999999999999988864
No 304
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=33.86 E-value=10 Score=35.41 Aligned_cols=25 Identities=24% Similarity=0.287 Sum_probs=20.1
Q ss_pred eEEEEEEccCCCcHHHHHHHHhccc
Q 047598 207 FRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 207 ~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
.--|+|+|-.+.|||||+.++....
T Consensus 9 ~~~i~viGHVd~GKSTL~~~Ll~~~ 33 (222)
T d1zunb3 9 MLRFLTCGNVDDGKSTLIGRLLHDS 33 (222)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHHHT
T ss_pred cceEEEEcCCCCCHHHHHHHHHHHc
Confidence 3347888999999999998886543
No 305
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=30.76 E-value=11 Score=29.03 Aligned_cols=21 Identities=29% Similarity=0.676 Sum_probs=18.3
Q ss_pred EEEEccCCCcHHHHHHHHhcc
Q 047598 210 IPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~~ 230 (1112)
|-++|.||+|-+.||+.+.+.
T Consensus 4 ihfiGIgG~GMs~LA~~L~~~ 24 (89)
T d1j6ua1 4 IHFVGIGGIGMSAVALHEFSN 24 (89)
T ss_dssp EEEETTTSHHHHHHHHHHHHT
T ss_pred EEEEeECHHHHHHHHHHHHhC
Confidence 567899999999999998764
No 306
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.26 E-value=14 Score=34.75 Aligned_cols=21 Identities=19% Similarity=0.351 Sum_probs=18.1
Q ss_pred EEEEEccCCCcHHHHHHHHhc
Q 047598 209 VIPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~ 229 (1112)
=|+|+|-.+.|||||+.++..
T Consensus 8 Ni~iiGHvD~GKsTl~~~ll~ 28 (239)
T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIY 28 (239)
T ss_dssp EEEEEECTTSCHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHH
Confidence 578899999999999977754
No 307
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=27.03 E-value=7.3 Score=32.78 Aligned_cols=18 Identities=22% Similarity=0.034 Sum_probs=14.6
Q ss_pred EEEEEEccCCCcHHHHHH
Q 047598 208 RVIPIVGMAGVGKTTLAR 225 (1112)
Q Consensus 208 ~vv~I~G~gGiGKTtLa~ 225 (1112)
+.+.|++..|.|||..|-
T Consensus 8 ~~~il~~~tGsGKT~~~~ 25 (140)
T d1yksa1 8 MTTVLDFHPGAGKTRRFL 25 (140)
T ss_dssp CEEEECCCTTSSTTTTHH
T ss_pred CcEEEEcCCCCChhHHHH
Confidence 456788999999997764
No 308
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=26.47 E-value=13 Score=41.16 Aligned_cols=16 Identities=38% Similarity=0.493 Sum_probs=12.5
Q ss_pred EEEEccCCCcHHHHHH
Q 047598 210 IPIVGMAGVGKTTLAR 225 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~ 225 (1112)
+.|+|.+|+||||.+-
T Consensus 27 ~lV~A~AGSGKT~~lv 42 (623)
T g1qhh.1 27 LLIMAGAGSGKTRVLT 42 (623)
T ss_dssp EEEEECTTSCHHHHHH
T ss_pred EEEEEeCchHHHHHHH
Confidence 4555999999998763
No 309
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=25.46 E-value=22 Score=33.89 Aligned_cols=38 Identities=21% Similarity=0.182 Sum_probs=25.9
Q ss_pred hhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhc
Q 047598 184 DKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 184 ~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~ 229 (1112)
....++|.+.+.. +....--+.|.-|+|||-+|-....
T Consensus 89 ~~ai~ei~~d~~~--------~~~m~rLL~GdvGSGKT~Va~~a~~ 126 (264)
T d1gm5a3 89 KRAHQEIRNDMIS--------EKPMNRLLQGDVGSGKTVVAQLAIL 126 (264)
T ss_dssp HHHHHHHHHHHHS--------SSCCCCEEECCSSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc--------cCcceeeeeccccccccHHHHHHHH
Confidence 4456677776755 1222446889999999999866554
No 310
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=25.05 E-value=12 Score=35.34 Aligned_cols=20 Identities=30% Similarity=0.503 Sum_probs=17.7
Q ss_pred EEEEccCCCcHHHHHHHHhc
Q 047598 210 IPIVGMAGVGKTTLAREVYN 229 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~~ 229 (1112)
|+|.|-.+.|||||+.++..
T Consensus 27 i~iiGHVD~GKSTL~~~Ll~ 46 (245)
T d1r5ba3 27 IVFIGHVDAGKSTLGGNILF 46 (245)
T ss_dssp EEEEECGGGTHHHHHHHHHH
T ss_pred EEEEeeCCCCHHHHHHHHHH
Confidence 88899999999999988754
No 311
>d2dtge5 c.10.2.5 (E:312-467) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.01 E-value=40 Score=28.89 Aligned_cols=33 Identities=12% Similarity=0.113 Sum_probs=20.7
Q ss_pred eEEeecCCCCCcCC--CCCCCCCcc-EEEEccCcch
Q 047598 1041 YLWIKNCPNLASFP--ELGLPSSLT-QLYIDHCPLV 1073 (1112)
Q Consensus 1041 ~L~ls~c~~l~~lp--~~~~~~~L~-~L~l~~c~~l 1073 (1112)
.|.+.+|+.++.+- .+..+.... .+.|.+||.|
T Consensus 88 ~l~i~~N~~L~~L~l~~L~~l~i~~G~v~i~~N~~L 123 (156)
T d2dtge5 88 SFYALDNQNLRQLWDWSKHNLTITQGKLFFHYNPKL 123 (156)
T ss_dssp EEEEESCTTCCBSCCTTSCCCBCSSCEEEEESBTTS
T ss_pred EEEEEeCCCcCcccCCCCCCeEEecCEEEEEcCCCc
Confidence 46788888887763 332222111 5788889987
No 312
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=23.61 E-value=34 Score=30.21 Aligned_cols=36 Identities=25% Similarity=0.374 Sum_probs=25.4
Q ss_pred EEEEEccCCCcHHHHHHHHhccccccccCCCCceeEEEEeCCCCC
Q 047598 209 VIPIVGMAGVGKTTLAREVYNDKSLNAKDFKFDIKAWVCISDVFD 253 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~~~~~~~~~~F~~~~wv~~~~~~~ 253 (1112)
++-|.|..++|||..|.++... +..+.+|--++.+|
T Consensus 1 iiLVtGGarSGKS~~AE~l~~~---------~~~~~YiAT~~~~D 36 (180)
T d1c9ka_ 1 MILVTGGARSGKSRHAEALIGD---------APQVLYIATSQILD 36 (180)
T ss_dssp CEEEEECTTSSHHHHHHHHHCS---------CSSEEEEECCCC--
T ss_pred CEEEECCCCccHHHHHHHHHhc---------CCCcEEEEccCCCC
Confidence 3679999999999999988642 33456666666655
No 313
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=23.56 E-value=39 Score=30.55 Aligned_cols=41 Identities=27% Similarity=0.288 Sum_probs=26.6
Q ss_pred eecchhhHHHHHHHHhcCCCCCCCCCCeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 180 VYGRDKDKARILKMVLSTDEKTDDDANFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 180 ~vGr~~~~~~l~~~L~~~~~~~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
+-=|+-+.+.+..++.. + +. .|++..|.|||.+|..+....
T Consensus 69 ~~Lr~yQ~eav~~~~~~---------~-~~-ll~~~tG~GKT~~a~~~~~~~ 109 (206)
T d2fz4a1 69 ISLRDYQEKALERWLVD---------K-RG-CIVLPTGSGKTHVAMAAINEL 109 (206)
T ss_dssp CCCCHHHHHHHHHHTTT---------S-EE-EEEESSSTTHHHHHHHHHHHS
T ss_pred CCcCHHHHHHHHHHHhC---------C-Cc-EEEeCCCCCceehHHhHHHHh
Confidence 33466666666555422 1 22 367789999999988877543
No 314
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.14 E-value=38 Score=32.75 Aligned_cols=26 Identities=19% Similarity=0.390 Sum_probs=21.8
Q ss_pred CeEEEEEEccCCCcHHHHHHHHhccc
Q 047598 206 NFRVIPIVGMAGVGKTTLAREVYNDK 231 (1112)
Q Consensus 206 ~~~vv~I~G~gGiGKTtLa~~v~~~~ 231 (1112)
...-|+|+|--+.|||||..++....
T Consensus 25 ~~P~ivvvG~~SsGKSsliNaLlg~~ 50 (299)
T d2akab1 25 DLPQIAVVGGQSAGKSSVLENFVGRD 50 (299)
T ss_dssp CCCEEEEEEBTTSCHHHHHHHHHTSC
T ss_pred CCCeEEEEcCCCCCHHHHHHHHhCCC
Confidence 34468899999999999999998754
No 315
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=23.04 E-value=19 Score=27.77 Aligned_cols=21 Identities=14% Similarity=0.202 Sum_probs=16.3
Q ss_pred EEEEEccCCCcHHHHHHHHhcc
Q 047598 209 VIPIVGMAGVGKTTLAREVYND 230 (1112)
Q Consensus 209 vv~I~G~gGiGKTtLa~~v~~~ 230 (1112)
-|.|+|+|++|.++ |+.+.+.
T Consensus 7 ~v~ViGlG~sG~s~-a~~L~~~ 27 (93)
T d2jfga1 7 NVVIIGLGLTGLSC-VDFFLAR 27 (93)
T ss_dssp CEEEECCSHHHHHH-HHHHHHT
T ss_pred EEEEEeECHHHHHH-HHHHHHC
Confidence 47889999999976 7776654
No 316
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=22.61 E-value=22 Score=32.07 Aligned_cols=18 Identities=39% Similarity=0.385 Sum_probs=13.7
Q ss_pred EEEccCCCcHHHHHHHHh
Q 047598 211 PIVGMAGVGKTTLAREVY 228 (1112)
Q Consensus 211 ~I~G~gGiGKTtLa~~v~ 228 (1112)
.|+++.|.|||..|..+.
T Consensus 27 lv~~pTGsGKT~i~~~~~ 44 (200)
T d1wp9a1 27 LIVLPTGLGKTLIAMMIA 44 (200)
T ss_dssp EEECCTTSCHHHHHHHHH
T ss_pred EEEeCCCCcHHHHHHHHH
Confidence 477999999998665443
No 317
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=22.42 E-value=14 Score=33.68 Aligned_cols=17 Identities=29% Similarity=0.286 Sum_probs=14.1
Q ss_pred EEEEccCCCcHHHHHHH
Q 047598 210 IPIVGMAGVGKTTLARE 226 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~ 226 (1112)
+.|.++.|.|||+.|..
T Consensus 43 ~il~apTGsGKT~~a~l 59 (202)
T d2p6ra3 43 LLLAMPTAAGKTLLAEM 59 (202)
T ss_dssp EEEECSSHHHHHHHHHH
T ss_pred EEEEcCCCCchhHHHHH
Confidence 56899999999998743
No 318
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=20.12 E-value=1.6e+02 Score=26.13 Aligned_cols=19 Identities=26% Similarity=0.148 Sum_probs=14.3
Q ss_pred EEEEccCCCcHHHHHHHHh
Q 047598 210 IPIVGMAGVGKTTLAREVY 228 (1112)
Q Consensus 210 v~I~G~gGiGKTtLa~~v~ 228 (1112)
+.+....|.|||..+....
T Consensus 45 ~iv~a~TGsGKT~~~~l~~ 63 (208)
T d1hv8a1 45 IVAQARTGSGKTASFAIPL 63 (208)
T ss_dssp EEEECCSSSSHHHHHHHHH
T ss_pred eeeechhcccccceeeccc
Confidence 4577899999998774443
Done!