BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047599
(165 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6H9K0|PGLR2_PLAAC Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2
PE=1 SV=1
Length = 377
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 71/121 (58%), Gaps = 11/121 (9%)
Query: 2 HGSITYITSRDSKNFHFN-------TFK-INIQAPENSPHTDGIHIANSNNIQILNSEIS 53
H + ITS +SK FH N TF+ + + AP S +TDGIH+ S + I N++I+
Sbjct: 138 HAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIA 197
Query: 54 TGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSN 113
TGDDC S+ PGSQNV I + V P ISI SLG NEKE R ITV+ C GT N
Sbjct: 198 TGDDCISIGPGSQNVTI-TQVNCGPG--HGISIGSLGRYNNEKEVRGITVKGCTFSGTMN 254
Query: 114 G 114
G
Sbjct: 255 G 255
>sp|P35339|PGLR3_MAIZE Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1
Length = 410
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 75/121 (61%), Gaps = 11/121 (9%)
Query: 2 HGSITYITSRDSKNFHFNTFK--------INIQAPENSPHTDGIHIANSNNIQILNSEIS 53
+G ++ IT +SK FH N +K +N+ AP +SP+TDGIH+ +S+ + I N+ I
Sbjct: 171 NGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIG 230
Query: 54 TGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSN 113
GDDC S+ PG+ VNI+ V P + ISI SLG +EK+ +I V++C LK T+N
Sbjct: 231 VGDDCISIGPGTSKVNITG-VTCGPGH--GISIGSLGRYKDEKDVTDINVKDCTLKKTAN 287
Query: 114 G 114
G
Sbjct: 288 G 288
>sp|P35337|PGLR_BRANA Polygalacturonase OS=Brassica napus PE=2 SV=1
Length = 397
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 73/118 (61%), Gaps = 11/118 (9%)
Query: 5 ITYITSRDSKNFHFN-------TFK-INIQAPENSPHTDGIHIANSNNIQILNSEISTGD 56
I +TS D+KNFHFN TF I I AP SP+TDGIH+ ++ILN++I+TGD
Sbjct: 151 IKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGD 210
Query: 57 DCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
DC S+ G +N+ I K+ IS+ SLG E++ +ITV+NC L+GTSNG
Sbjct: 211 DCISVGDGMKNLLIE---KVVCGPGHGISVGSLGRYGWEQDVTDITVKNCTLEGTSNG 265
>sp|P24548|PGLR_OENOR Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1
Length = 362
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 11/115 (9%)
Query: 8 ITSRDSKNFHFN-------TF-KINIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCA 59
+T+ DSKNFH N TF + I A E S +TDGIHI S+ + I+N+EI TGDDC
Sbjct: 123 VTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCI 182
Query: 60 SMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
S+ GS+N+NI +N+ P + IS+ SLG NE+ I V+NC + G+ NG
Sbjct: 183 SLGDGSKNINI-TNITCGPGH--GISVGSLGRYKNEESVVGIYVKNCTITGSQNG 234
>sp|Q40312|PGLR_MEDSA Polygalacturonase OS=Medicago sativa PE=2 SV=1
Length = 421
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 8 ITSRDSKNFHFNTFK--------INIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCA 59
+TS+DSKNFH F I AP +SP+TDGIH+ S +++ILN+ I TGDDC
Sbjct: 163 VTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCV 222
Query: 60 SMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
S+ GS+ + + V P + +S+ SLG E+ ITV+NC L T NG
Sbjct: 223 SIGDGSKQITV-QGVNCGPGH--GLSVGSLGKFTTEENVEGITVKNCTLTATDNG 274
>sp|P49063|PGLR2_ARATH Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana
GN=At3g07850 PE=1 SV=2
Length = 444
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 69/118 (58%), Gaps = 11/118 (9%)
Query: 5 ITYITSRDSKNFHFNTF--------KINIQAPENSPHTDGIHIANSNNIQILNSEISTGD 56
I ITS +SK FH N I I AP S +TDGIHI SN + ++ ++I TGD
Sbjct: 202 INSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGD 261
Query: 57 DCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
DC S+ G++N+ I NV+ P + ISI SLG PNE+ + +TV+ C +K T NG
Sbjct: 262 DCVSIGDGTENL-IVENVECGPGH--GISIGSLGRYPNEQPVKGVTVRKCLIKNTDNG 316
>sp|Q39786|PGLR_GOSHI Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1
Length = 407
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 5 ITYITSRDSKNFHFNTF--------KINIQAPENSPHTDGIHIANSNNIQILNSEISTGD 56
I ITS+DSK FH N F ++ I+AP+ SP+TDGIH+ S + I+ S+I TGD
Sbjct: 162 IQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGD 221
Query: 57 DCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSNGGT 116
DC S+ G++N+ I + P + ISI SLG NE+ I + NC + TSNG
Sbjct: 222 DCISIGDGTKNMVI-KEITCGPGH--GISIGSLGKFQNEEPVEGIKISNCTITNTSNGAR 278
Query: 117 SST 119
T
Sbjct: 279 IKT 281
>sp|P26216|PGLR1_MAIZE Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1
Length = 410
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 72/121 (59%), Gaps = 11/121 (9%)
Query: 2 HGSITYITSRDSKNFHFNTFK--------INIQAPENSPHTDGIHIANSNNIQILNSEIS 53
+G ++ +T +SK FH N ++ + + AP +SP+TDGIH+ +S+ I I N+ I
Sbjct: 171 NGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIG 230
Query: 54 TGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSN 113
GDDC S+ PG+ VNI+ V P + ISI SLG +EK+ +I V++C LK T
Sbjct: 231 VGDDCISIGPGTSKVNITG-VTCGPGH--GISIGSLGRYKDEKDVTDINVKDCTLKKTMF 287
Query: 114 G 114
G
Sbjct: 288 G 288
>sp|Q39766|PGLR_GOSBA Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1
Length = 407
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 5 ITYITSRDSKNFHFNTF--------KINIQAPENSPHTDGIHIANSNNIQILNSEISTGD 56
I ITS+DSK FH N F ++ I+AP+ SP+TDGIH+ S + I+ S+I TGD
Sbjct: 162 IQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGD 221
Query: 57 DCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSNGGT 116
DC S+ G++N+ I + P + ISI SLG NE+ I + NC + TSNG
Sbjct: 222 DCISIGDGTKNMVIKE-ITCGPGH--GISIGSLGKFQNEEPVEGIKISNCTITNTSNGAR 278
Query: 117 SST 119
T
Sbjct: 279 IKT 281
>sp|P35338|PGLR2_MAIZE Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1
Length = 410
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 72/121 (59%), Gaps = 11/121 (9%)
Query: 2 HGSITYITSRDSKNFHFNTFK--------INIQAPENSPHTDGIHIANSNNIQILNSEIS 53
+G ++ +T +SK FH N ++ + + AP +SP+TDGIH+ +S+ I I N+ I
Sbjct: 171 NGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIG 230
Query: 54 TGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSN 113
GDDC S+ PG+ VNI+ V P + ISI SLG +EK+ +I V++C LK T
Sbjct: 231 VGDDCISIGPGTSKVNITG-VTCGPGH--GISIGSLGRYKDEKDVTDINVKDCTLKKTMF 287
Query: 114 G 114
G
Sbjct: 288 G 288
>sp|Q05967|PGLR_TOBAC Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1
Length = 396
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 11/119 (9%)
Query: 4 SITYITSRDSKNFHFN-------TF-KINIQAPENSPHTDGIHIANSNNIQILNSEISTG 55
+I IT+ DSK+FH N TF + N+ AP NSP+TDGIH++ S+++ I +S STG
Sbjct: 153 TIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTG 212
Query: 56 DDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
DDC S+ ++ + I + V P + IS+ SLGG P+EK + V+NC T NG
Sbjct: 213 DDCISVGDETEQLYI-TRVTCGPGH--GISVGSLGGNPDEKPVVGVFVRNCTFTNTDNG 268
>sp|P49062|PGLR1_ARATH Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3
PE=2 SV=1
Length = 422
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 94/177 (53%), Gaps = 22/177 (12%)
Query: 5 ITYITSRDSKNFHFNTFK---INIQ-----APENSPHTDGIHIANSNNIQILNSEISTGD 56
I I+S ++K FH K +NIQ AP SP+TDGIH++N++N+ IL+S I+TGD
Sbjct: 182 INGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGD 241
Query: 57 DCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSNG-- 114
DC S+ GS NV + V P +S+ SLG NE++ I V NC + T NG
Sbjct: 242 DCVSVGRGSNNVTV-ERVICGPG--HGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLR 298
Query: 115 ----GTSSTKVAVDLQCSKVKPRDKIELRDIDMACHGAGGG--QAAVSN--YSNVHG 163
G S AVD++ + + ID +G+ GG Q A+S+ + N+ G
Sbjct: 299 IKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQN-YGSRGGDSQVAISDILFKNIRG 354
>sp|O22818|PGLR6_ARATH Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana
GN=At2g43860 PE=2 SV=1
Length = 405
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 11/118 (9%)
Query: 5 ITYITSRDSKNFHF--------NTFKINIQAPENSPHTDGIHIANSNNIQILNSEISTGD 56
I+ +TS +S+ FH N + + A ENSP+TDGIH+ +S+++ I NS I TGD
Sbjct: 166 ISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGD 225
Query: 57 DCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
DC S+ PGS NV I + ++ P + ISI SLG E+ +TV N + GT+NG
Sbjct: 226 DCISIGPGSTNVFIQT-IRCGPGH--GISIGSLGRAEEEQGVDNVTVSNVDFMGTNNG 280
>sp|P48979|PGLR_PRUPE Polygalacturonase OS=Prunus persica PE=2 SV=1
Length = 393
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 5 ITYITSRDSKNFHF--NTFK------INIQAPENSPHTDGIHIANSNNIQILNSEISTGD 56
++ + S +S+ FH N F+ + + NSP+TDGIH+ S+ + ILNS+I+TGD
Sbjct: 160 VSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGD 219
Query: 57 DCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
DC S+ PG+ N+ I V P + ISI SLG E + +TV+ GT NG
Sbjct: 220 DCVSIGPGTSNLWI-EGVACGPGH--GISIGSLGKEQEEAGVQNVTVKTVTFSGTQNG 274
>sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana
GN=At3g15720 PE=1 SV=1
Length = 456
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 23 INIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVE 82
+ I APE+SP+TDGI + S+N+ I + I+TGDDC +++ G+ N++I S + P +
Sbjct: 177 LRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHI-SGIDCGPGH-- 233
Query: 83 SISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
ISI SLG + VQNCN +GT NG
Sbjct: 234 GISIGSLGKDGETATVENVCVQNCNFRGTMNG 265
>sp|Q02096|PGLR_PERAE Polygalacturonase OS=Persea americana PE=2 SV=1
Length = 462
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 68/118 (57%), Gaps = 11/118 (9%)
Query: 5 ITYITSRDSKNFHFNTFK--------INIQAPENSPHTDGIHIANSNNIQILNSEISTGD 56
++ ++ +DS+ H + K + + APE+SP+TDGIHI + I ++NS I TGD
Sbjct: 219 VSDLSIKDSQKMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGD 278
Query: 57 DCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
DC S++ GS+ V I++N+ P + ISI SLG +E + V NL T+NG
Sbjct: 279 DCISIESGSKMV-IATNITCGPGH--GISIGSLGDRNSEAHVSGVLVDGGNLFDTTNG 333
>sp|Q8RY29|ADPG2_ARATH Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2
Length = 433
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 13/115 (11%)
Query: 27 APENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVESISI 86
AP +SP+TDGIHI N+ NI++ S I TGDDC S++ GSQNV I +++ P ISI
Sbjct: 235 APADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQI-NDITCGPG--HGISI 291
Query: 87 RSLGGTPNEKEAREITVQNCNLKGTSNG----------GTSSTKVAVDLQCSKVK 131
SLG ++ +TV L GT NG GT+S + ++Q VK
Sbjct: 292 GSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVK 346
>sp|P48978|PGLR_MALDO Polygalacturonase OS=Malus domestica PE=2 SV=1
Length = 460
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 23 INIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVE 82
+ + APE+SP+TDGIH+ N+ NI I +S I TGDDC S+ GSQ V ++++ P +
Sbjct: 259 LTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQ-ATDITCGPGH-- 315
Query: 83 SISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
ISI SLG +E + V L GTSNG
Sbjct: 316 GISIGSLGEDGSEDHVSGVFVNGAKLSGTSNG 347
>sp|P35336|PGLR_ACTDE Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1
Length = 467
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 23 INIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVE 82
+ + APENSP+TDGIH+ + NI I + I TGDDC S+ GS+ V + +++ P +
Sbjct: 250 LMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNGSRKVRV-NDITCGPGH-- 306
Query: 83 SISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
ISI SLG +E ++ V L GT+NG
Sbjct: 307 GISIGSLGYGNSEAHVSDVVVNGAKLCGTTNG 338
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 93 PNEKEAREITVQNCNLKGTSNGGTSSTKVAVDLQCSKVKPRDKIELRDIDMACHGAGGGQ 152
P ++++ + V+N + GT ++ VA+ CSK P I L D+D+ G +
Sbjct: 380 PCQEQSSAVQVKNVVYQNIK--GTCASNVAITFDCSKRFPCQGIVLEDVDLEIEGGAAAK 437
Query: 153 AAVSN 157
A +N
Sbjct: 438 ALCNN 442
>sp|O23147|ADPG1_ARATH Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1
Length = 431
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 23 INIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVE 82
+ I AP +SP+TDGIHI N+ NI++ NS+I TGDDC S++ G+QN+ I ++ P +
Sbjct: 231 VEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQI-FDLTCGPGH-- 287
Query: 83 SISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
ISI SLG ++ I V + NG
Sbjct: 288 GISIGSLGDDNSKAYVSGINVDGAKFSESDNG 319
>sp|Q94AJ5|PGLR5_ARATH Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana
GN=At1g80170 PE=1 SV=1
Length = 444
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 23 INIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVE 82
+ + AP SP+TDGIHI+ S I I N+ +STGDDC S+ S ++I SN+ P +
Sbjct: 216 LKVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISI-SNIICGPGH-- 272
Query: 83 SISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
ISI SLG + + +E R+ITV + T+NG
Sbjct: 273 GISIGSLGKSKSWEEVRDITVDTAIISDTANG 304
>sp|Q9SFB7|QRT2_ARATH Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2
Length = 439
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 7 YITSRDSKNFHFNTFKINIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQ 66
++T +D KN + + +P +SP+TDGIH++ + NI I +S + TGDDC S+ GS+
Sbjct: 218 HLTFQDCKNV--KALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSE 275
Query: 67 NVNISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
NV ++ + P + ISI SLG +E + V L GT+NG
Sbjct: 276 NVR-ATGITCGPGH--GISIGSLGEDNSEAYVSNVVVNKATLIGTTNG 320
>sp|P05117|PGLR_SOLLC Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1
Length = 457
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 25 IQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVESI 84
I A SP+TDG+H++N+ IQI ++ I TGDDC S+ GSQNV ++N+ P + I
Sbjct: 239 INASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSGSQNVQ-ATNITCGPGH--GI 295
Query: 85 SIRSLGGTPNEKEAREITVQNCNLKGTSNGGTSSTKVAVDLQCSKVKPRDKIELRDI 141
SI SLG +E +TV + G NG T Q S +K + +E++D+
Sbjct: 296 SIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTWQGGSGQASNIKFLN-VEMQDV 351
>sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100
PE=2 SV=1
Length = 475
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 22 KINIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNV 81
+I I +P+ SP+TDGIH+ N+ ++ I NS +S GDDC S+ G +V+I V PS+
Sbjct: 248 EIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDI-QGVTCGPSH- 305
Query: 82 ESISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
ISI SLG ++ ITV+N ++ + NG
Sbjct: 306 -GISIGSLGVHNSQACVSNITVRNTVIRDSDNG 337
>sp|P43212|PGLR2_CRYJA Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1
Length = 514
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 23 INIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVE 82
I+I AP +SP+TDGI I S N + + I TGDDC ++ GS N+ I ++ P +
Sbjct: 222 ISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVI-EDLICGPGH-- 278
Query: 83 SISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
ISI SLG + E + V T NG
Sbjct: 279 GISIGSLGRENSRAEVSYVHVNGAKFIDTQNG 310
>sp|Q9FY19|PGLR2_JUNAS Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1
Length = 507
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 23 INIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVE 82
I I+AP +SP+TDGI I S +I I TGDDC ++ GS N+ I ++ P +
Sbjct: 223 IKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTGSSNITI-KDLTCGPGH-- 279
Query: 83 SISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
+SI SLG + E + + T NG
Sbjct: 280 GMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNG 311
>sp|Q7M1E7|PGLR2_CHAOB Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1
Length = 514
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 23 INIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVE 82
+ I+AP +SP+TDGI I S I I TGDDC ++ GS N+ I ++ P +
Sbjct: 222 LKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTGSSNITI-KDLICGPGH-- 278
Query: 83 SISIRSLGGTPNEKEAREITVQNCNLKGTSNG 114
ISI SLG + E + V T NG
Sbjct: 279 GISIGSLGRDNSRAEVSHVHVNRAKFIDTQNG 310
>sp|Q873X6|PGXB_EMENI Probable exopolygalacturonase B OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgxB
PE=2 SV=1
Length = 440
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 15 NFHFNTFKINIQA-PENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSN 73
N N + N A P+N TDG N N + + N+ + GDDC S P + N+ + +
Sbjct: 221 NVFINAYSTNASAEPKN---TDGFDSLNVNGLSVTNTRVDIGDDCFSPKPNTTNIFVQN- 276
Query: 74 VKIWPSNVESISIRSLGGTPNEKEARE-ITVQNCNLKGTSNGGTSSTKVAVDLQCSKV 130
+W +N +S+ S+G P + E ++N L NG D+ ++
Sbjct: 277 --LWCNNTHGVSMGSIGQYPGVLDIIEHAYIENVTLLNGENGARLKAWAGEDVGYGRI 332
>sp|Q27UB1|PGXB_ASPNG Exopolygalacturonase B OS=Aspergillus niger GN=pgxB PE=3 SV=1
Length = 438
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 15 NFHFNTFKINIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNV 74
N + + F N A + +TDG+ + + + N I GDDC S P + N+ + +
Sbjct: 216 NVYIHAFSTN--ASSDPANTDGMDSLDVDGVSFTNMRIDVGDDCFSPKPNTTNIFVQN-- 271
Query: 75 KIWPSNVESISIRSLGGTPNEKEARE-ITVQNCNLKGTSNGGTSSTKVAVDLQCSKV 130
+W +N +S+ S+G E + E + ++N L NG D+ ++
Sbjct: 272 -MWCNNTHGVSMGSIGQYAGEMDIIENVYIENVTLLNGQNGARLKAWAGQDVGYGRI 327
>sp|A2QHG0|PGXB_ASPNC Probable exopolygalacturonase B OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgxB PE=3 SV=1
Length = 438
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 15 NFHFNTFKINIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNV 74
N + + F N A + +TDG+ + + + N I GDDC S P + N+ + +
Sbjct: 216 NVYIHAFSTN--ASSDPANTDGMDSLDVDGVSFTNMRIDVGDDCFSPKPNTTNIFVQN-- 271
Query: 75 KIWPSNVESISIRSLGGTPNEKEARE-ITVQNCNLKGTSNGGTSSTKVAVDLQCSKV 130
+W +N +S+ S+G E + E + ++N L NG D+ ++
Sbjct: 272 -MWCNNTHGVSMGSIGQYAGEMDIIENVYIENVTLLNGQNGARLKAWAGQDVGYGRI 327
>sp|Q2UP32|RGXA_ASPOR Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=rgxA PE=3 SV=1
Length = 437
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 15 NFHFNTFKINIQAPENS---PHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNIS 71
NF+ N + A E++ +TDGI S+++ I N GDD + P S N+++
Sbjct: 192 NFYVNATNSDPNATEDTVWIQNTDGIDTYRSDHVTITNWVYEGGDDAVAFKPNSTNIHV- 250
Query: 72 SNVKIWPSNVESISIRSLGGTPNEKEARE-ITVQNCNLKGTSNGGTSS 118
NV ++ I+ SLG P+ + E ITV+N N + +S +S
Sbjct: 251 ENVTVYGG--PGIAFGSLGQYPDRYDIVENITVKNANFQPSSQRAMNS 296
>sp|B8NJB0|RGXA_ASPFN Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus
flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 /
JCM 12722 / SRRC 167) GN=rgxA PE=3 SV=2
Length = 437
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 15 NFHFNTFKINIQAPENS---PHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNIS 71
NF+ N + A E++ +TDGI S+++ I N GDD + P S N+++
Sbjct: 192 NFYVNATNSDPNATEDTVWIQNTDGIDTYRSDHVTITNWVYEGGDDAVAFKPNSTNIHV- 250
Query: 72 SNVKIWPSNVESISIRSLGGTPNEKEARE-ITVQNCNLKGTSNGGTSS 118
NV ++ I+ SLG P+ + E ITV+N N + +S +S
Sbjct: 251 ENVTVYGG--PGIAFGSLGQYPDRYDIVENITVKNANFQPSSQRAMNS 296
>sp|P18192|PGLR1_PECCC Endo-polygalacturonase OS=Pectobacterium carotovorum subsp.
carotovorum GN=peh PE=3 SV=1
Length = 402
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Query: 12 DSKNFH--------FNTFKINIQAPENSPHTDGIHIANSNNIQILNSEISTGDD 57
+S NFH F +K I+ P + +TDGI +S NI I +S ISTGDD
Sbjct: 197 NSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDD 250
>sp|Q4WBK6|PGXB_ASPFU Probable exopolygalacturonase B OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgxB
PE=3 SV=2
Length = 453
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 34 TDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTP 93
TDG N + + + N+ + GDDC S P + NV + + +W + S+ S+G P
Sbjct: 233 TDGFDTLNVDGLTVTNTRVDIGDDCLSPKPNTTNVFVKN---LWCNGTHGASMGSIGQYP 289
Query: 94 NEKEARE-ITVQNCNLKGTSNGGTSSTKVAVDLQCSKV 130
+ E + ++N L NG D+ ++
Sbjct: 290 GVLDIIENVWIENVTLLNGENGARLKAWAGPDVGYGRI 327
>sp|B0YAA4|PGXB_ASPFC Probable exopolygalacturonase B OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=pgxB PE=3 SV=2
Length = 453
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 28 PENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVESISIR 87
P+N TDG N + + + N+ + GDDC S P + NV + + +W + S+
Sbjct: 230 PKN---TDGFDTLNVDGLTVTNTRVDIGDDCLSPKPNTTNVFVKN---LWCNGTHGASMG 283
Query: 88 SLGGTPNEKEARE-ITVQNCNLKGTSNGGTSSTKVAVDLQCSKV 130
S+G P + E + ++N L NG D+ ++
Sbjct: 284 SIGQYPGVLDIIENVWIENVTLLNGENGARLKAWAGPDVGYGRI 327
>sp|P26509|PGLR2_PECSS Endo-polygalacturonase OS=Pectobacterium sp. (strain SCC3193)
GN=pehA PE=1 SV=1
Length = 402
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 12 DSKNFH--------FNTFKINIQAPENSPHTDGIHIANSNNIQILNSEISTGDD 57
+S NFH F +K I+ P + +TDGI +S NI I S I+TGDD
Sbjct: 197 NSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDD 250
>sp|A1DLC1|PGLRX_NEOFI Probable exopolygalacturonase X OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaX
PE=3 SV=2
Length = 432
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 34 TDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTP 93
TDG S+NI I NS I+ GDDC S P S N+ I N+ + IS+ SLG
Sbjct: 223 TDGWDTYRSDNIVIQNSVINNGDDCVSFKPNSTNI-IVQNLHC--NGSHGISVGSLGQYK 279
Query: 94 NEKE-AREITVQNCNLKGTSNG 114
E + + + V N ++ S+G
Sbjct: 280 GEVDIVQNVLVYNISMYNASDG 301
>sp|A1DAX2|PGXB_NEOFI Probable exopolygalacturonase B OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgxB
PE=3 SV=1
Length = 453
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 34 TDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTP 93
TDG N + + + N+ + GDDC S P + NV + + +W + S+ S+G P
Sbjct: 233 TDGFDTLNVDGLTVTNTRVDIGDDCLSPKPNTTNVFVQN---LWCNGTHGTSMGSIGQYP 289
Query: 94 NEKEARE-ITVQNCNLKGTSNGG 115
+ E + ++N L NG
Sbjct: 290 GVLDIIENVWIENVTLLNGENGA 312
>sp|Q4WCZ8|PGLRX_ASPFU Probable exopolygalacturonase X OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgaX
PE=3 SV=2
Length = 432
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 34 TDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTP 93
TDG S+NI I NS I+ GDDC S P S N+ + + + + IS+ SLG
Sbjct: 223 TDGWDTYRSDNIVIQNSVINNGDDCVSFKPNSTNILVQN---LHCNGSHGISVGSLGQYK 279
Query: 94 NEKE-AREITVQNCNLKGTSNG 114
E + + + V N ++ S+G
Sbjct: 280 GEVDIVQNVLVYNISMYNASDG 301
>sp|B0YDE8|PGLRX_ASPFC Probable exopolygalacturonase X OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=pgaX PE=3 SV=2
Length = 432
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 34 TDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTP 93
TDG S+NI I NS I+ GDDC S P S N+ + + + + IS+ SLG
Sbjct: 223 TDGWDTYRSDNIVIQNSVINNGDDCVSFKPNSTNILVQN---LHCNGSHGISVGSLGQYK 279
Query: 94 NEKE-AREITVQNCNLKGTSNG 114
E + + + V N ++ S+G
Sbjct: 280 GEVDIVQNVLVYNISMYNASDG 301
>sp|Q27UB3|PGLRX_ASPNG Exopolygalacturonase X OS=Aspergillus niger GN=pgaX PE=3 SV=1
Length = 435
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 34 TDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTP 93
TDG SNNI I NS I+ GDDC S P S N+ + + + + IS+ SLG
Sbjct: 222 TDGWDTYRSNNIVIQNSVINNGDDCVSFKPNSTNILVQN---LHCNGSHGISVGSLGQYK 278
Query: 94 NEKEARE-ITVQNCNLKGTSN 113
+E + E + V N ++ S+
Sbjct: 279 DEVDIVENVYVYNISMFNASD 299
>sp|A2R060|PGLRX_ASPNC Probable exopolygalacturonase X OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgaX PE=3 SV=1
Length = 435
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 34 TDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTP 93
TDG SNNI I NS I+ GDDC S P S N+ + + + + IS+ SLG
Sbjct: 222 TDGWDTYRSNNIVIQNSVINNGDDCVSFKPNSTNILVQN---LHCNGSHGISVGSLGQYK 278
Query: 94 NEKEARE-ITVQNCNLKGTSN 113
+E + E + V N ++ S+
Sbjct: 279 DEVDIVENVYVYNISMFNASD 299
>sp|Q00293|PGLRX_ASPTU Exopolygalacturonase X OS=Aspergillus tubingensis GN=pgaX PE=1 SV=1
Length = 435
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 34 TDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTP 93
TDG SNNI I NS I+ GDDC S P S N+ + + + + IS+ SLG
Sbjct: 222 TDGWDTYRSNNIVIQNSVINNGDDCVSFKPNSTNILVQN---LHCNGSHGISVGSLGQYK 278
Query: 94 NEKEARE-ITVQNCNLKGTSN 113
+E + E + V N ++ S+
Sbjct: 279 DEVDIVENVYVYNISMFNASD 299
>sp|A7PZL3|PGLR_VITVI Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001
PE=1 SV=1
Length = 491
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 23 INIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNIS 71
I I AP SP+TDGI+ + N +I + I +GDDC ++ G I+
Sbjct: 238 ITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIA 286
>sp|A1DBT5|XGHA_NEOFI Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=xghA PE=3 SV=1
Length = 406
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 12 DSKNFHFNTFKINIQAPENSP--HTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVN 69
D+K+ F +++ + ++P +TDG I +S ++ I + +S DDC ++ PG V
Sbjct: 182 DAKDVTFTNLRMDATSRSDNPPKNTDGFDIGSSTHVTISSVSVSNDDDCVALKPGCNYVT 241
Query: 70 ISSNVKIWPSNVESISIRSLG 90
+ NV S IS+ SLG
Sbjct: 242 V-ENVTCTGS--HGISVGSLG 259
>sp|P27644|PGLR_RHIRD Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1
Length = 312
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 24 NIQAPENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVES 83
I AP +SP+TDG + + N+ I S GDDC ++ G + + + +
Sbjct: 62 TIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHL---AETRG 118
Query: 84 ISIRS----------LGGTPNEKEAREITVQNCNLKGTSNG 114
I++R + G+ ++TV++C++ GT G
Sbjct: 119 ITVRHCLMQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRG 159
>sp|Q0C7H7|PGXB_ASPTN Probable exopolygalacturonase B OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=pgxB PE=3 SV=1
Length = 435
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 15 NFHFNTFKINIQA-PENSPHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSN 73
N + F N A P+N TDG N + + N+ ++ GDDC S P + ++ + +
Sbjct: 215 NVYIEAFSTNASALPKN---TDGFDSYNVKGLSVTNTRVNVGDDCFSPKPNTTDIFVQN- 270
Query: 74 VKIWPSNVESISIRSLGGTPNEKEARE-ITVQNCNLKGTSNGG 115
+W + +S+ S+G P + E ++N L NG
Sbjct: 271 --LWCNGTHGVSMGSIGQYPGVMDIIEHAYIENVTLLNGQNGA 311
>sp|A2RAY7|RGXC_ASPNC Putative galacturan 1,4-alpha-galacturonidase C OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=rgxC PE=2 SV=1
Length = 423
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 15 NFHFNTFKIN---IQAPENS---PHTDGIHIANSNNIQILNSEISTGDDCASMDPGSQNV 68
N FN N + AP +TDG ++ NIQ+ N GDDC ++ P S N+
Sbjct: 182 NMRFNNIYCNATAVDAPWGDNWVQNTDGFDTMDATNIQLTNFVYQGGDDCIAIKPRSYNI 241
Query: 69 NISSNVKIWPSNVESISIRSLGGTPNEKEAREITVQNCNL 108
+I NV N I+I SLG + I V N+
Sbjct: 242 DI-QNVTCRGGN--GIAIGSLGQYLEDSSVANIRVDKVNI 278
>sp|Q0CGP0|PGLRX_ASPTN Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=pgaX PE=3 SV=1
Length = 434
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 34 TDGIHIANSNNIQILNSEISTGDDCASMDPGSQNVNISSNVKIWPSNVESISIRSLGGTP 93
TDG S+NI I NS ++ GDDC S P S ++ + + + + IS+ SLG
Sbjct: 223 TDGWDTYRSSNIVIQNSVVNNGDDCVSFKPNSTDILVQN---MHCNGSHGISVGSLGQYK 279
Query: 94 NEKE-AREITVQNCNLKGTSNGGTSSTKVAVDLQCSKVKPRDKIELRDIDMACHGAGGGQ 152
E + + I V N ++ S D+ KV P L + D+ GGG
Sbjct: 280 GEIDIVKNILVYNISMYNAS-----------DMARIKVWPGVDSALSE-DLQ---GGGGS 324
Query: 153 AAVSN 157
AVSN
Sbjct: 325 GAVSN 329
>sp|B8NX60|PGXB_ASPFN Probable exopolygalacturonase B OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=pgxB PE=3 SV=1
Length = 435
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 7 YITSRD--SKNFHFNTFKINIQA-PENSPHTDGIHIANSNNIQILNSEISTGDDCASMDP 63
+I S+D + + + F N A P+NS DG N + + + N+ + GDDC S P
Sbjct: 205 FIQSKDVSFDDVYIHAFSTNKSALPKNS---DGFDSLNVDGLTVTNTRVDVGDDCFSPKP 261
Query: 64 GSQNVNISSNVKIWPSNVESISIRSLGGTPNEKEARE-ITVQNCNLKGTSNGGTSSTKVA 122
+ N+ + + + +N +S+ S+G P + E ++N L NG
Sbjct: 262 NTTNIFVQN---LLCNNTHGVSMGSIGQYPGVMDIIEHAYIENVTLLNGQNGARLKAWAG 318
Query: 123 VDLQCSKV 130
D+ ++
Sbjct: 319 QDVGYGRI 326
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,498,203
Number of Sequences: 539616
Number of extensions: 2498428
Number of successful extensions: 4676
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 4498
Number of HSP's gapped (non-prelim): 230
length of query: 165
length of database: 191,569,459
effective HSP length: 109
effective length of query: 56
effective length of database: 132,751,315
effective search space: 7434073640
effective search space used: 7434073640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)