BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047604
(382 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q68EQ9|VMP1_XENTR Vacuole membrane protein 1 OS=Xenopus tropicalis GN=vmp1 PE=2 SV=1
Length = 406
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 219/397 (55%), Gaps = 54/397 (13%)
Query: 3 FMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAA 62
F++D + + ++E +++ L +P T++ FIL V+ LK + L + +++S ++ A
Sbjct: 29 FLSDRKSRDREERQSIVLWRKPLITLQYFILEVLITLKDWSIRLWHRR-MMVVSVLLLLA 87
Query: 63 LGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTI 122
+ ++ I+G H+++++ + + + +WV LG+ SS+GLG+GLHTF+LYLGPHIA TI
Sbjct: 88 VLSVVYYIEGTHQQYVQYVEKKCLWCAYWVGLGILSSVGLGTGLHTFLLYLGPHIASVTI 147
Query: 123 KAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEA 182
A +C V+ PY DE P +EG+ + L +I+ +V+LEA
Sbjct: 148 AAYECNSVNFPEPPYP---------------DEIICPDEEGTEGA-ISLWTIISKVRLEA 191
Query: 183 ILWGVGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD------------ 224
+WG GTA+GELPPYF++RAA +SG D + EF++ + T D
Sbjct: 192 CMWGAGTAIGELPPYFMARAARLSGVETDDEEYAEFEEMLEHAQTAQDFATRAKLAVQNL 251
Query: 225 ------------GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISV 272
+PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I
Sbjct: 252 VQKVGFLGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKLFVIIT 311
Query: 273 CNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSF 332
+ +++ +++ ++ ++P P L + + K L ++ S + + W S+
Sbjct: 312 FSKHIVE----QMVSLIGVIPSIGPSLQKPFQEYLEAQRKKLHHKEDSGAPQSENW-LSW 366
Query: 333 ASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIA 369
A + +V +M+ F + I+ AQ Y K+ Q ++++
Sbjct: 367 A--FEKLVIIMVFYFILSIINSMAQSYAKRVQQRKLS 401
>sp|Q91ZQ0|VMP1_RAT Vacuole membrane protein 1 OS=Rattus norvegicus GN=Vmp1 PE=1 SV=1
Length = 406
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 205/391 (52%), Gaps = 54/391 (13%)
Query: 6 DLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGI 65
+ + + ++E +N+ L QP T++ F L + LK L + ++ ++AAL +
Sbjct: 32 EKKRRDREERQNIVLWRQPLITLQYFSLETLVVLKEWTSKLWHRQSMVVSFFLLLAAL-V 90
Query: 66 LLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAM 125
++G H+++++ + + F +W+ LG+ SS+GLG+GLHTF+LYLGPHIA T+ A
Sbjct: 91 ATYYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAY 150
Query: 126 QCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILW 185
+C V+ PY D+ P +EG+ + L SI+ +V++EA +W
Sbjct: 151 ECNSVNFPEPPYP---------------DQIICPDEEGTEGA-ISLWSIISKVRIEACMW 194
Query: 186 GVGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD--------------- 224
G+GTA+GELPPYF++RAA +SG+ D + EF++ + T D
Sbjct: 195 GIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQDFASRAKLAVQKLVQK 254
Query: 225 ---------GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNN 275
+PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I +
Sbjct: 255 VGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIVTFSK 314
Query: 276 QLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSFASV 335
+++ +++ + VPG P L + + + L + + + + W +
Sbjct: 315 HIVE----QMVAFIGAVPGIGPSLQKPFQEYLEAQRQKLHHRSEAGTAQGENW---LSWT 367
Query: 336 WNTIVWLMLMNFFVKIVTDTAQRYLKKQQDK 366
+ +V M+ F + I+ AQ Y K+ Q +
Sbjct: 368 FEKLVVAMVCYFILSIINSMAQSYAKRIQQR 398
>sp|Q99KU0|VMP1_MOUSE Vacuole membrane protein 1 OS=Mus musculus GN=Vmp1 PE=2 SV=2
Length = 406
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 205/391 (52%), Gaps = 54/391 (13%)
Query: 6 DLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGI 65
+ + + ++E +N+ L QP T++ F L + LK L + +++S ++ A +
Sbjct: 32 EKKRRDREERQNIVLWRQPLITLQYFSLETLVVLKEWTSKLWHRQS-IVVSFLLLLAALV 90
Query: 66 LLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAM 125
++G H+++++ + + F +W+ LG+ SS+GLG+GLHTF+LYLGPHIA T+ A
Sbjct: 91 ATYYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAY 150
Query: 126 QCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILW 185
+C V+ PY D+ P +EG+ + L SI+ +V++EA +W
Sbjct: 151 ECNSVNFPEPPYP---------------DQIICPEEEGAEGA-ISLWSIISKVRIEACMW 194
Query: 186 GVGTALGELPPYFISRAASISGSRLDAMD--EFDDSSTESDGV----------------- 226
G+GTA+GELPPYF++RAA +SG+ D + EF++ ++
Sbjct: 195 GIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAEAAQDFASRAKLAVQKLVQK 254
Query: 227 -----------VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNN 275
+PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I +
Sbjct: 255 VGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIVTFSK 314
Query: 276 QLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSFASV 335
+++ +++ + VPG P L + + + L + + + + W + +
Sbjct: 315 HIVE----QMVTFIGAVPGIGPSLQKPFQEYLEAQRQKLHHRSEAGTPQGENW---LSWM 367
Query: 336 WNTIVWLMLMNFFVKIVTDTAQRYLKKQQDK 366
+ +V M+ F + I+ AQ Y K+ Q +
Sbjct: 368 FEKLVVAMVCYFVLSIINSMAQNYAKRIQQR 398
>sp|Q6INE8|VMP1_XENLA Vacuole membrane protein 1 OS=Xenopus laevis GN=vmp1 PE=2 SV=1
Length = 406
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 213/397 (53%), Gaps = 54/397 (13%)
Query: 3 FMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAA 62
FM + + + ++E +++ L +P T++ FIL V+ LK + L + +++S ++ A
Sbjct: 29 FMCNRKRRDREERQSIVLWRKPLITLQYFILEVLINLKEWSVRLWHRR-MMVVSVLLLLA 87
Query: 63 LGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTI 122
+ + I+G H++ ++ + + + +WV LG+ SS+GLG+GLHTF+LYLGPHIA TI
Sbjct: 88 VLSVAYYIEGEHQQCVQYIEKKCLWCAYWVGLGILSSVGLGTGLHTFLLYLGPHIASVTI 147
Query: 123 KAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEA 182
A +C V+ PY DE P +EG+ + L +I+ +V+LEA
Sbjct: 148 AAYECNSVNFPEPPYP---------------DEIICPDEEGTEGA-ISLWTIISKVRLEA 191
Query: 183 ILWGVGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD------------ 224
+WG GTA+GELPPYF++RAA +SG D + EF++ + T D
Sbjct: 192 CMWGAGTAIGELPPYFMARAARLSGVETDDEEYAEFEEMLEHAQTAQDFATRAKLTVQNL 251
Query: 225 ------------GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISV 272
+PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I
Sbjct: 252 VQKVGFLGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKLFVIIT 311
Query: 273 CNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSF 332
+ +++ +++ ++ ++P P L + + K L + S + + W
Sbjct: 312 FSKHIVE----QMVSLIGVIPSIGPSLQKPFQEYLEAQRKKLHHKGDSGTPQSENW---L 364
Query: 333 ASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIA 369
+ + +V +M+ F + I+ AQ Y K+ Q K+++
Sbjct: 365 SWAFEKLVIIMVFYFILSIINSMAQSYAKRVQQKKLS 401
>sp|Q6NYY9|VMP1_DANRE Vacuole membrane protein 1 OS=Danio rerio GN=vmp1 PE=2 SV=1
Length = 406
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 210/400 (52%), Gaps = 65/400 (16%)
Query: 5 ADLREKHQQELE---NLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVA 61
+ LRE+ Q + E +L L +PF T++ F L LK L + G + L+ V+
Sbjct: 28 SSLRERKQLDREERLSLVLWKRPFITLQYFFLETAITLKEWTWKLWQRRGVVFLT-VVLF 86
Query: 62 ALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFT 121
+L L +I+G H+++++ L + F + +WV LG+ SS+GLG+GLHTF+LYLGPHIA T
Sbjct: 87 SLFSLAYSIEGAHQEYVQHLEKKFLWCAYWVGLGILSSVGLGTGLHTFLLYLGPHIASVT 146
Query: 122 IKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLE 181
+ A +CG V+ PY P+ + DE + + L +I+ +V+LE
Sbjct: 147 LAAYECGSVNFPEPPY--------PAQIVCPEDE--------ALQESISLWTIMSKVRLE 190
Query: 182 AILWGVGTALGELPPYFISRAASISGS--------RLDAMDEFDDSSTE----------- 222
A +WG GTA+GELPPYF++RAA +SG+ + M E S+ +
Sbjct: 191 ACMWGAGTAIGELPPYFMARAARMSGADPDDEDYEEFEEMLEHSQSAQDFASRAKLAVQN 250
Query: 223 -----------SDGVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIIS 271
+ +PNPLFDLAGI CG F +PFW FF ATLIGKAIIK HIQ +F+I
Sbjct: 251 MVQKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAIIKMHIQKLFVII 310
Query: 272 VCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFS 331
+ +++ +++ ++ ++PG A L +YL+ Q+ H +
Sbjct: 311 TFSKHIVE----QMVSLIGVIPGVG-------ASLQKPFREYLEAQRTKLHNPAGDGAAA 359
Query: 332 FAS----VWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKE 367
S V+ +V +M+ F + I+ AQ Y K+ Q K+
Sbjct: 360 GESWLSWVFEKVVLVMVCYFILSIINSMAQSYAKRLQQKK 399
>sp|Q5R9K4|VMP1_PONAB Vacuole membrane protein 1 OS=Pongo abelii GN=VMP1 PE=2 SV=1
Length = 406
Score = 205 bits (521), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 203/385 (52%), Gaps = 62/385 (16%)
Query: 16 ENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHE 75
+N+ L QP T++ F L ++ LK L + +++S ++ A+ I ++G H+
Sbjct: 42 QNIVLWRQPLITLQYFSLEILVILKEWTSKLWHRQS-IVVSFLLLLAVLIATYYVEGAHQ 100
Query: 76 KHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSA 135
++++ + + F +W+ LG+ SS+GLG+GLHTF+LYLGPHIA T+ A +C V+
Sbjct: 101 QYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSVNFPEP 160
Query: 136 PYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGTALGELP 195
PY D+ P +EG+ + L SI+ +V++EA +WG+GTA+GELP
Sbjct: 161 PYP---------------DQIICPDEGGTEGT-ISLWSIISKVRIEACMWGIGTAIGELP 204
Query: 196 PYFISRAASISGSRLD--AMDEFDDSSTESDGV--------------------------- 226
PYF++RAA +SG+ D EF++ ++
Sbjct: 205 PYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQDFASRAKLAVQKLVQKVGFFGILACA 264
Query: 227 -VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENEL 285
+PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I + +++ ++
Sbjct: 265 SIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIITFSKHIVE----QM 320
Query: 286 IWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVK----KWDFSFASVWNTIVW 341
+ + VPG P L +YL+ Q+ H K + + + + ++ +V
Sbjct: 321 VAFIGAVPGIGP-------SLQKPFQEYLEAQRQKLHHKSEMGTPQGENWLSWMFEKLVV 373
Query: 342 LMLMNFFVKIVTDTAQRYLKKQQDK 366
+M+ F + I+ AQ Y K+ Q +
Sbjct: 374 VMVCYFILSIINSMAQSYAKRIQQR 398
>sp|Q96GC9|VMP1_HUMAN Vacuole membrane protein 1 OS=Homo sapiens GN=VMP1 PE=1 SV=1
Length = 406
Score = 204 bits (520), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 203/385 (52%), Gaps = 62/385 (16%)
Query: 16 ENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHE 75
+N+ L QP T++ F L ++ LK L + +++S ++ A+ I ++G H+
Sbjct: 42 QNIVLWRQPLITLQYFSLEILVILKEWTSKLWHRQS-IVVSFLLLLAVLIATYYVEGVHQ 100
Query: 76 KHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSA 135
++++ + + F +W+ LG+ SS+GLG+GLHTF+LYLGPHIA T+ A +C V+
Sbjct: 101 QYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSVNFPEP 160
Query: 136 PYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGTALGELP 195
PY D+ P +EG+ + L SI+ +V++EA +WG+GTA+GELP
Sbjct: 161 PYP---------------DQIICPDEEGTEGT-ISLWSIISKVRIEACMWGIGTAIGELP 204
Query: 196 PYFISRAASISGSRLD--AMDEFDDSSTESDGV--------------------------- 226
PYF++RAA +SG+ D EF++ ++
Sbjct: 205 PYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQDFASRAKLAVQKLVQKVGFFGILACA 264
Query: 227 -VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENEL 285
+PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I + +++ ++
Sbjct: 265 SIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIITFSKHIVE----QM 320
Query: 286 IWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVK----KWDFSFASVWNTIVW 341
+ + VPG P L +YL+ Q+ H K + + + + ++ +V
Sbjct: 321 VAFIGAVPGIGP-------SLQKPFQEYLEAQRQKLHHKSEMGTPQGENWLSWMFEKLVV 373
Query: 342 LMLMNFFVKIVTDTAQRYLKKQQDK 366
+M+ F + I+ AQ Y K+ Q +
Sbjct: 374 VMVCYFILSIINSMAQSYAKRIQQR 398
>sp|Q0VCK9|VMP1_BOVIN Vacuole membrane protein 1 OS=Bos taurus GN=VMP1 PE=2 SV=1
Length = 406
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 206/391 (52%), Gaps = 54/391 (13%)
Query: 6 DLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGI 65
+ + + ++E +N+ L QP T++ F L + LK L + +++S ++ A+
Sbjct: 32 EKKRRDREERQNIVLWRQPLITLQYFSLETLVILKEWTSKLWHRQS-IVVSFLLLLAVLT 90
Query: 66 LLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAM 125
++G H+++++ + + F +W+ LG+ SS+GLG+GLHTF+LYLGPHIA T+ A
Sbjct: 91 ATYYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAY 150
Query: 126 QCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILW 185
+C V+ PY D+ P +EG+ + L SI+ +V++EA +W
Sbjct: 151 ECNSVNFPEPPYP---------------DQIICPDEEGTEGT-ISLWSIISKVRIEACMW 194
Query: 186 GVGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD--------------- 224
G+GTA+GELPPYF++RAA +SG+ D + EF++ + T D
Sbjct: 195 GIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQDFASRAKLAVQNLVQK 254
Query: 225 ---------GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNN 275
+PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I +
Sbjct: 255 VGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKLFVIVAFSK 314
Query: 276 QLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSFASV 335
+++ +++ + VPG P L + + + L + + + W + +
Sbjct: 315 HIVE----QMVAFIGAVPGIGPSLQKPFQEYLEAQRQKLHHRSEMGTPQGENW---LSWM 367
Query: 336 WNTIVWLMLMNFFVKIVTDTAQRYLKKQQDK 366
+ +V +M+ F + I+ AQ Y K+ Q +
Sbjct: 368 FEKLVVVMVCYFILSIINSMAQSYAKRIQQR 398
>sp|Q54NL4|VMP1_DICDI Vacuole membrane protein 1 homolog OS=Dictyostelium discoideum
GN=vmp1 PE=3 SV=1
Length = 403
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 198/403 (49%), Gaps = 72/403 (17%)
Query: 9 EKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLV 68
E+ +++ +N+ L P KT K F+ + L + Y + +L+ + A+L + V
Sbjct: 23 EERKEKRKNVKLLFSPIKTTKYFLYILKDTLVSGIRYFQTRP-FLLFFIALFASLTFIAV 81
Query: 69 TIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCG 128
+ G H+K++ + S+ +WWV LGV SSIGLG+GLHTFVLYLGPHIA T+ A +
Sbjct: 82 YVPGEHQKYMGKYSDLISDCIWWVGLGVLSSIGLGTGLHTFVLYLGPHIAKVTLAATEWN 141
Query: 129 RVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVG 188
V+ + F P + G V IL +VQ A+ WG G
Sbjct: 142 SVNFNVY----------------GANSFIQPATAMIGG--VSFWMILQKVQWAALFWGAG 183
Query: 189 TALGELPPYFISRAASISGSRLDAMDEF--------DDSSTESDGV-------------- 226
TA+GELPPYF++R A + G +L+ + D+ G+
Sbjct: 184 TAIGELPPYFVARTARLKGLKLEQEKKLKEQQEKPIDEKDQPKKGLLERLSEKVPALIGN 243
Query: 227 -----------VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNN 275
+PNPLFDLAGI CG F VPFWKFF AT IGKA++K HIQ F+I N
Sbjct: 244 LGFFGILAFASIPNPLFDLAGITCGHFLVPFWKFFGATFIGKAVVKAHIQACFVILAFNM 303
Query: 276 QLL----DWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFS 331
+ L +IE+++ ++ + + P+L KL++ + P S + +
Sbjct: 304 ETLTMVISFIEDKIPFLKNKI---QPILEKERQKLNST----VSANSPKSLVGL------ 350
Query: 332 FASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNN 374
W+ +++LM+ F + IV + Q YL ++ +K+I L +
Sbjct: 351 ---AWDCVLFLMISYFLMSIVDSSVQEYLIEKDNKKIELLKSK 390
>sp|Q9XWU8|VMP1_CAEEL Ectopic P granules protein 3 OS=Caenorhabditis elegans GN=epg-3
PE=2 SV=2
Length = 458
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 194/404 (48%), Gaps = 76/404 (18%)
Query: 11 HQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTI 70
++ E E + +P I ++ + +LA L+L+ + L +
Sbjct: 48 NRMERETIVFWRRPHIVIPYALMEIAHLAVELFFKILAHKTVLLLTAISIG-LAVYGYHA 106
Query: 71 DGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRV 130
G H++H++ + ++ + WWV LGV SSIGLGSGLHTF++YLGPHIA T+ A +C +
Sbjct: 107 PGAHQEHVQTIEKHILWWSWWVLLGVLSSIGLGSGLHTFLIYLGPHIAAVTMAAYECQSL 166
Query: 131 DLKSAPY-DTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGT 189
D PY ++IQ C S+ V I+ +V++E++LWG GT
Sbjct: 167 DFPQPPYPESIQ-----------CP-------STKSSIAVTFWQIVAKVRVESLLWGAGT 208
Query: 190 ALGELPPYFISRAASISGSRLDAMD-----EFDDSSTESD-------------------- 224
ALGELPPYF++RAA ISG D + E ++ ESD
Sbjct: 209 ALGELPPYFMARAARISGQEPDDEEYREFLELMNADKESDADQKLSIVERAKSWVEHNIH 268
Query: 225 ----------GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCN 274
+PNPLFDLAGI CG F VPFW FF ATLIGKA++K H+Q F+I +
Sbjct: 269 RLGFPGILLFASIPNPLFDLAGITCGHFLVPFWSFFGATLIGKALVKMHVQMGFVILAFS 328
Query: 275 NQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVK----KWDF 330
+ + + +L +P P + ++ L + K L + P H + W
Sbjct: 329 DHHAE----NFVKILEKIPAVGPYIRQPISDLLEKQRKALH-KTPGEHSEQSTSYLAWGL 383
Query: 331 SFASVWNTIVWLMLMNFFVKIVTDTAQRY------LKKQQDKEI 368
S +V M++ FF+ IV A+ Y K++Q+K++
Sbjct: 384 SL------MVTFMILFFFLSIVNSLAKDYHKRLWERKRRQNKDL 421
>sp|Q8JL78|PROF_ECTVM Profilin OS=Ectromelia virus (strain Moscow) GN=EVM141 PE=1 SV=1
Length = 134
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 225 GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENE 284
+PN F A I+ G+ +A + + I+K I F I V N L+D E
Sbjct: 34 AAIPNRTF--AKIIPGEV--------IALITNRNILKPRIGQKFFI-VYTNSLMD----E 78
Query: 285 LIWVLSLVPGFAPVLPSLVAKLHT 308
+ + L+ G+APV P ++A+ HT
Sbjct: 79 NTYTMELLTGYAPVSPIVIARTHT 102
>sp|Q3KIA0|DNAK_PSEPF Chaperone protein DnaK OS=Pseudomonas fluorescens (strain Pf0-1)
GN=dnaK PE=3 SV=1
Length = 638
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 115 PHIALFTIKAMQCGR--------VDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEG 166
PH LF +K + GR D+K PY ++ G +W++ + PP S
Sbjct: 62 PHNTLFAVKRL-IGRRFEEEVVQKDIKLVPYKIVKANNGDAWVEASGKQMAPPQIS---- 116
Query: 167 SRVPLSSILPQVQLEAILWGVGTALGE----LPPYFIS--RAASISGSRLDAMD 214
+ +L +++ A + +G A+ E +P YF R A+ R+ +D
Sbjct: 117 -----AEVLKKMKKTAEDY-LGEAVTEAVITVPAYFNDSQRQATKDAGRIAGLD 164
>sp|B1J254|DNAK_PSEPW Chaperone protein DnaK OS=Pseudomonas putida (strain W619) GN=dnaK
PE=3 SV=1
Length = 642
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Query: 115 PHIALFTIKAMQCGR--------VDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSS 164
PH LF +K + GR D+K PY ++ G +W++ E PP S+
Sbjct: 62 PHNTLFAVKRL-IGRRFEEDVVQKDIKLVPYKIVKANNGDAWVEASGKEMAPPQISAE 118
>sp|A8YTR2|MSCL_LACH4 Large-conductance mechanosensitive channel OS=Lactobacillus
helveticus (strain DPC 4571) GN=mscL PE=3 SV=1
Length = 125
Score = 32.7 bits (73), Expect = 5.1, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 31/50 (62%)
Query: 323 IKVKKWDFSFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALT 372
+KV + +F + S N+I+ ++++F V ++ ++ KK++++ AA T
Sbjct: 57 LKVGEANFRYGSFLNSIINFLIISFIVFLIVKAVNKFTKKEEEETPAAPT 106
>sp|P34968|5HT2C_MOUSE 5-hydroxytryptamine receptor 2C OS=Mus musculus GN=Htr2c PE=2 SV=2
Length = 459
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 249 FFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHT 308
FF+ ++ T+I +V CN +L++ + N +W+ + G P++ +L K++
Sbjct: 318 FFVFLIMWCPFFITNILSVLCGKACNQKLMEKLLNVFVWIGYVCSGINPLVYTLFNKIYR 377
Query: 309 MR-AKYLKPQ-QPSSHIKVKKWDFSFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDK 366
+KYL+ +P V++ A+ L V I T +R ++K D
Sbjct: 378 RAFSKYLRCDYKPDKKPPVRQIPRVAATA------LSGRELNVNIYRHTNERVVRKANDT 431
Query: 367 E 367
E
Sbjct: 432 E 432
>sp|P83510|TNIK_MOUSE Traf2 and NCK-interacting protein kinase OS=Mus musculus GN=Tnik
PE=1 SV=2
Length = 1323
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 286 IWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSFAS 334
I + + G P+ +H MRA +L P+ P+ +K KKW F S
Sbjct: 221 ITAIEMAEGAPPL-----CDMHPMRALFLIPRNPAPRLKSKKWSKKFQS 264
>sp|Q9UKE5|TNIK_HUMAN TRAF2 and NCK-interacting protein kinase OS=Homo sapiens GN=TNIK
PE=1 SV=1
Length = 1360
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 286 IWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSFAS 334
I + + G P+ +H MRA +L P+ P+ +K KKW F S
Sbjct: 221 ITAIEMAEGAPPL-----CDMHPMRALFLIPRNPAPRLKSKKWSKKFQS 264
>sp|Q195N6|PDRP1_MAIZE Pyruvate, phosphate dikinase regulatory protein, chloroplastic
OS=Zea mays GN=PDRP1 PE=1 SV=1
Length = 426
Score = 31.6 bits (70), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 169 VPLSSILPQVQLEAILWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGVVP 228
VP + +L + +EAI +G A +P F SR +S +D D + + DGV+P
Sbjct: 223 VPCTDVL-RPTVEAIASHIGVAPSGIPRSFPSRNGRLSEDYFQRIDAIDFTIKQDDGVLP 281
Query: 229 NPLFDLAGIMCG 240
+ ++ G
Sbjct: 282 QNFYRADIVLAG 293
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,476,196
Number of Sequences: 539616
Number of extensions: 5985892
Number of successful extensions: 12803
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 12764
Number of HSP's gapped (non-prelim): 32
length of query: 382
length of database: 191,569,459
effective HSP length: 119
effective length of query: 263
effective length of database: 127,355,155
effective search space: 33494405765
effective search space used: 33494405765
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)