BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047612
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93ZE2|TGA7_ARATH Transcription factor TGA7 OS=Arabidopsis thaliana GN=TGA7 PE=1 SV=1
Length = 368
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 8/216 (3%)
Query: 14 NVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVA 73
+ASFE + WL Q + EL +A ++H D +LK LV+ L HY +Q KS A
Sbjct: 151 GIASFEMEYSHWLQEQSRRVSELRTALQSH--ISDIELKMLVESCLNHYANLFQMKSDAA 208
Query: 74 QHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVE 133
+ +VF L + W T E+ F WI GF P+ VV ++ L D+Q + +L ++
Sbjct: 209 KADVFYLISGMWRTSTERFFQWIGGFRPSELLNVVMPYLQPLTDQQILEVRNLQQSSQQA 268
Query: 134 EKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADML 193
E L+ + ++Q+S+A +++ M +E NL+A LE V AD L
Sbjct: 269 EDALSQGIDKLQQSLAESIVIDAVIESTHYPT-HMAAAIE----NLQA-LEGFVNQADHL 322
Query: 194 RTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
R T ++ +IL Q+ + A+ R+R +S
Sbjct: 323 RQQTLQQMAKILTTRQSARGLLALGEYLHRLRALSS 358
>sp|Q39163|TGA5_ARATH Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2
Length = 330
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 15/234 (6%)
Query: 2 SENPRARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAH 61
S +A D +F+ +R W + + EL SA ++H + D +L+ +V V+AH
Sbjct: 98 SSGDQAHSTAGDGAMAFDVEYRRWQEDKNRQMKELSSAIDSH--ATDSELRIIVDGVIAH 155
Query: 62 YQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQ 121
Y++ Y+ K A+ +VF L + W TP E+ F W+ GF + +++ ++ L ++Q
Sbjct: 156 YEELYRIKGNAAKSDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSL 215
Query: 122 RMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRR------GRLGEWEMTEGVEVT 175
+++L ++ E L+ + +Q+S+A +G+ M G T
Sbjct: 216 DINNLQQSSQQAEDALSQGMDNLQQSLADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGT 275
Query: 176 ESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
LE + AD LR T ++V +L Q+ + AV LR+R +S
Sbjct: 276 -------LEGFIRQADNLRLQTYQQMVRLLTTRQSARALLAVHNYTLRLRALSS 322
>sp|Q39234|TGA3_ARATH Transcription factor TGA3 OS=Arabidopsis thaliana GN=TGA3 PE=1 SV=1
Length = 384
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 7/220 (3%)
Query: 10 NNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEK 69
N + +A+FE + WL Q + E+ +A + H D +LK LV L HY ++ K
Sbjct: 162 NMNSGIAAFEMEYTHWLEEQNRRVSEIRTALQAH--IGDIELKMLVDSCLNHYANLFRMK 219
Query: 70 SKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVE 129
+ A+ +VF L + W T E+ F WI GF P+ VV V+ L D+Q + +L
Sbjct: 220 ADAAKADVFFLMSGMWRTSTERFFQWIGGFRPSELLNVVMPYVEPLTDQQLLEVRNLQQS 279
Query: 130 TRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVAN 189
++ E+ L+ L ++Q+ + +++ M +E NL+A LES V
Sbjct: 280 SQQAEEALSQGLDKLQQGLVESIAIQIKVVESVNHGAPMASAME----NLQA-LESFVNQ 334
Query: 190 ADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
AD LR T ++ +IL Q + A+ R+R +S
Sbjct: 335 ADHLRQQTLQQMSKILTTRQAARGLLALGEYFHRLRALSS 374
>sp|Q39140|TGA6_ARATH Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 PE=1 SV=2
Length = 330
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 15/234 (6%)
Query: 2 SENPRARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAH 61
S +A + +F+ WL + ++EL SA H + D +L+ +V V+AH
Sbjct: 98 SSGDQAHSTGGNGALAFDAEHSRWLEEKNRQMNELRSALNAH--AGDTELRIIVDGVMAH 155
Query: 62 YQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQ 121
Y++ ++ KS A+++VF L + W TP E+ F W+ GF + +++ ++ + + Q
Sbjct: 156 YEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQVM 215
Query: 122 RMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRR------GRLGEWEMTEGVEVT 175
++SL ++ E L+ + +Q+S+A +G+ M G T
Sbjct: 216 GINSLQQTSQQAEDALSQGMESLQQSLADTLSSGTLGSSSSDNVASYMGQMAMAMGQLGT 275
Query: 176 ESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
LE + AD LR T +++ +L Q+ + A+ R+R +S
Sbjct: 276 -------LEGFIRQADNLRLQTLQQMLRVLTTRQSARALLAIHDYSSRLRALSS 322
>sp|P23923|HBP1B_WHEAT Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1
Length = 332
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 112/237 (47%), Gaps = 37/237 (15%)
Query: 11 NDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKS 70
+ + +F+T + WL ++EL +A H + D +L+ +V+++++HY + +++K
Sbjct: 107 SGNGALAFDTEYARWLEEHNRQVNELRAAVNAH--AGDTELRSVVEKIMSHYDEIFKQKG 164
Query: 71 KVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVET 130
A+ +VF + + W TP E+ F W+ GF P+ ++++ ++ L ++Q + +L +
Sbjct: 165 NAAKADVFHVLSGMWKTPAERCFLWLGGFRPSELLKLLSTQLEPLTEQQLSGICNLQQSS 224
Query: 131 RVEEKLLNDELARIQESVA------------------GPTIMELARRRGRLGEWEMTEGV 172
+ E L+ + +Q+S+A + ++A G+LG
Sbjct: 225 QQAEDALSQGMEALQQSLAETLAGSIGSSGSGSTGNVANYMGQMAMAMGKLG-------- 276
Query: 173 EVTESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
+LE+ ++ AD LR T ++ IL Q+ + ++ R+R +S
Sbjct: 277 ---------TLENFLSQADNLRQQTLQQMQRILTTRQSARALLVISDYSSRLRALSS 324
>sp|Q39162|TGA4_ARATH Transcription factor TGA4 OS=Arabidopsis thaliana GN=TGA4 PE=1 SV=2
Length = 364
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 10 NNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEK 69
N + +FE + W+ Q + EL + H Q D +L+ LV+ + HY Q ++ K
Sbjct: 144 NMSSGIVAFEMEYGHWVEEQNRQICELRTVL--HGQVSDIELRSLVENAMKHYFQLFRMK 201
Query: 70 SKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVE 129
S A+ +VF + + W T E+ F WI GF P+ +V+ L D+Q + +L
Sbjct: 202 SAAAKIDVFYVMSGMWKTSAERFFLWIGGFRPSELLKVLLPHFDPLTDQQLLDVCNLRQS 261
Query: 130 TRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVAN 189
+ E L+ + ++Q ++A G+LGE + L A L S V
Sbjct: 262 CQQAEDALSQGMEKLQHTLAESVAA------GKLGEGSYIPQMTCAMERLEA-LVSFVNQ 314
Query: 190 ADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
AD LR T ++ IL Q + A+ R+R +S
Sbjct: 315 ADHLRHETLQQMHRILTTRQAARGLLALGEYFQRLRALSS 354
>sp|Q39237|TGA1_ARATH Transcription factor TGA1 OS=Arabidopsis thaliana GN=TGA1 PE=1 SV=2
Length = 368
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 9/218 (4%)
Query: 12 DDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSK 71
+ +A+FE + W+ Q + EL + H D +L+ LV+ + HY + ++ KS
Sbjct: 150 NPGIAAFEMEYGHWVEEQNRQICELRTVLHGH--INDIELRSLVENAMKHYFELFRMKSS 207
Query: 72 VAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETR 131
A+ +VF + + W T E+ F WI GF P+ +V+ L D+Q + +L +
Sbjct: 208 AAKADVFFVMSGMWRTSAERFFLWIGGFRPSDLLKVLLPHFDVLTDQQLLDVCNLKQSCQ 267
Query: 132 VEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANAD 191
E L + ++Q ++A G+LGE V L A L S V AD
Sbjct: 268 QAEDALTQGMEKLQHTLADCVAA------GQLGEGSYIPQVNSAMDRLEA-LVSFVNQAD 320
Query: 192 MLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
LR T ++ IL Q + A+ R+R +S
Sbjct: 321 HLRHETLQQMYRILTTRQAARGLLALGEYFQRLRALSS 358
>sp|P43273|TGA2_ARATH Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1
Length = 330
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 15/230 (6%)
Query: 6 RARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQY 65
+A + +F+ WL + ++EL SA H + D +L+ +V V+AHY++
Sbjct: 102 QAHSTGGNGALAFDAEHSRWLEEKNKQMNELRSALNAH--AGDSELRIIVDGVMAHYEEL 159
Query: 66 YQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDS 125
++ KS A+++VF L + W TP E+ F W+ GF + +++ ++ + + Q +++
Sbjct: 160 FRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQLMGINN 219
Query: 126 LSVETRVEEKLLNDELARIQESVAGPTIMELARRR------GRLGEWEMTEGVEVTESNL 179
L ++ E L+ + +Q+S+A +G+ M G T
Sbjct: 220 LQQTSQQAEDALSQGMESLQQSLADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGT---- 275
Query: 180 RASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
LE + AD LR T +++ +L Q+ + A+ R+R +S
Sbjct: 276 ---LEGFIRQADNLRLQTLQQMIRVLTTRQSARALLAIHDYFSRLRALSS 322
>sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana
tabacum GN=TGA21 PE=1 SV=1
Length = 456
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 2/213 (0%)
Query: 17 SFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHN 76
+F+ + WL ++EL +A H + D +L+ +V V AH+ + ++ K A+ +
Sbjct: 235 AFDAEYSRWLEEHNKHINELRTAVNAH--ASDPELRSIVNNVTAHFDEVFRVKGNAAKAD 292
Query: 77 VFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVEEKL 136
VF + + W TP E+ F WI GF P+ +++ ++ L ++Q + +L + E
Sbjct: 293 VFHVLSGMWKTPAERCFMWIGGFRPSELLKLLVNQLEPLTEQQLAGIYNLQQSSHQAEDA 352
Query: 137 LNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADMLRTT 196
L+ + +Q+S+A G G+ G +LE + AD LR
Sbjct: 353 LSQGMEALQQSLAETLANGSPAPEGSSGDVANYMGQMAMAMGKLGTLEGFLRQADNLRQQ 412
Query: 197 TTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
T ++ +L Q+ + A+ R+R +S
Sbjct: 413 TLQQMHRVLTTRQSARALLAINEYFSRLRALSS 445
>sp|Q41558|HBP1C_WHEAT Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum
PE=1 SV=2
Length = 476
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 107/228 (46%), Gaps = 2/228 (0%)
Query: 2 SENPRARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAH 61
S +++ + + +F+ + WL ++EL +A H + D+DL+++V +++
Sbjct: 243 SSGDQSQSASGNGAVAFDMEYARWLEEHNKHINELRAAANAH--AGDDDLRKIVDSIMSQ 300
Query: 62 YQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQ 121
Y ++++ K A+ +VF + + W TP E+ F W+ GF + +++ ++ L ++Q
Sbjct: 301 YDEFFRLKGVAAKADVFHVLSGMWKTPAERCFMWLGGFRSSELLKLLAGQLEPLTEQQLT 360
Query: 122 RMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRA 181
+ +L ++ E L+ + +Q+S+A G G G
Sbjct: 361 GICNLQQSSQQAEDALSQGMEALQQSLAETLASGSLGPAGSSGNVASYMGQMAMAMGKLG 420
Query: 182 SLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
+LE+ + AD LR T ++ IL Q+ + A++ R+R +S
Sbjct: 421 TLENFLRQADNLRLQTLQQMQRILTTRQSARALLAISDYFSRLRALSS 468
>sp|P14232|TGA1A_TOBAC TGACG-sequence-specific DNA-binding protein TGA-1A OS=Nicotiana
tabacum GN=TGA1A PE=1 SV=1
Length = 359
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 22/225 (9%)
Query: 14 NVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVA 73
A F+ + W+ Q ++L A H Q + +L+ +V L HY ++ K+ A
Sbjct: 142 GTAVFDMEYGHWVEEQTRQTNDLRIAL--HSQIGEAELRIIVDGYLNHYFDLFRMKATAA 199
Query: 74 QHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVE 133
+ +V + + W T E+ F WI GF P+ +V+ ++ L ++Q + + +L+ +
Sbjct: 200 KADVLYIMSGMWKTSAERFFMWIGGFRPSELLKVLTPHLELLTEQQLREVCNLTQSCQQA 259
Query: 134 EKLLNDELARIQESVAGPTIMELARRRGRLGEW-----EMTEGVEVTESNLRASLESLVA 188
E L+ + ++ + I+ A GRLGE +M +E E +R V
Sbjct: 260 EDALSQGMVKLHQ------ILAEAVAAGRLGEGNYTLPQMGPAIEKLEDLVR-----FVN 308
Query: 189 NADMLRTTTTAKVVEILDPLQNVKFFTAVA----RLQLRIRRWAS 229
AD LR T ++ IL+ Q + A+ RL++ +WA+
Sbjct: 309 QADHLRQETLQQMSRILNTCQAAQGLLALGEYFERLRVLSSQWAT 353
>sp|Q9SX27|PAN_ARATH Transcription factor PERIANTHIA OS=Arabidopsis thaliana GN=PAN PE=1
SV=1
Length = 452
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 18/171 (10%)
Query: 13 DNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKV 72
+ V SFE + W + ++++L S + Q D DL+ LV V++HY + ++ K
Sbjct: 231 NGVFSFELEYTRWKEEHQRMINDLRSGVNS--QLGDNDLRVLVDAVMSHYDEIFRLKGIG 288
Query: 73 AQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRV 132
+ +VF + + W TP E+ F W+ GF + +++ V L D+Q + +L ++
Sbjct: 289 TKVDVFHMLSGMWKTPAERFFMWLGGFRSSELLKILGNHVDPLTDQQLIGICNLQQSSQQ 348
Query: 133 EEKLLNDELARIQESV--------AGPT--------IMELARRRGRLGEWE 167
E L+ + +Q+S+ GP + +A G+LG E
Sbjct: 349 AEDALSQGMEALQQSLLETLSSASMGPNSSANVADYMGHMAMAMGKLGTLE 399
>sp|Q9BRR9|RHG09_HUMAN Rho GTPase-activating protein 9 OS=Homo sapiens GN=ARHGAP9 PE=1
SV=2
Length = 750
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 33 LDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQT 92
+ ELI + + L E + RV+AH +K+++ HN+ ++F PT F P ++T
Sbjct: 670 IQELIGSMPKPNHDTLRYLLEHLCRVIAH-----SDKNRMTPHNLGIVFGPTLFRPEQET 724
>sp|P18261|TRPD_BACPU Anthranilate phosphoribosyltransferase OS=Bacillus pumilus GN=trpD
PE=3 SV=1
Length = 340
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 11 NDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQE-K 69
D +++F A +VR I+ N S ++++ + H Q +E +
Sbjct: 80 GGDGLSTFNISTAAAIVRSA--AGAKIAKHGNRSVSSKSGSADVLECLGIHIQSTPEETR 137
Query: 70 SKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVE 129
++ + N+ LFAP + + +Q +A L FR V + L + + + V
Sbjct: 138 RQIQEKNMGFLFAPLYHSSMKQ----VAAVRKQLGFRTVFNLLGPLCHPMQAKKQIIGVY 193
Query: 130 TRVEEKLLNDELARIQ 145
++ + KL+ + LA ++
Sbjct: 194 SKEKAKLMAEALAPLE 209
>sp|A8GUF0|RECF_RICB8 DNA replication and repair protein RecF OS=Rickettsia bellii
(strain OSU 85-389) GN=recF PE=3 SV=1
Length = 360
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 58 VLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQ----TFFWIAGFNPTLAFRVVNESVK 113
+++ Y+ Y QE++K+ + ++ W E+ T +IA N + +++
Sbjct: 153 LVSKYEHYMQERNKILAED---MWDNNWLKTIEEKMADTSIYIAN-NRLKTLEFMQQAID 208
Query: 114 DLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGR 162
DL +E + LS++ VE+K+LN E E V G EL + R +
Sbjct: 209 DLENEFPKA--ELSIDGMVEQKILNGE-----EDVVGFIAAELHKTRDK 250
>sp|Q1RKJ9|RECF_RICBR DNA replication and repair protein RecF OS=Rickettsia bellii
(strain RML369-C) GN=recF PE=3 SV=1
Length = 360
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 58 VLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQ----TFFWIAGFNPTLAFRVVNESVK 113
+++ Y+ Y QE++K+ + ++ W E+ T +IA N + +++
Sbjct: 153 LVSKYEHYMQERNKILAED---MWDNNWLKTIEEKMADTSIYIAN-NRLKTLEFMQQAID 208
Query: 114 DLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGR 162
DL +E + LS++ VE+K+LN E E V G EL + R +
Sbjct: 209 DLENEFPKA--ELSIDGMVEQKILNGE-----EDVVGFIAAELHKTRDK 250
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,653,466
Number of Sequences: 539616
Number of extensions: 2911519
Number of successful extensions: 12058
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 12025
Number of HSP's gapped (non-prelim): 61
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)