Query 047613
Match_columns 224
No_of_seqs 161 out of 854
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 12:55:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047613.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047613hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13947 GUB_WAK_bind: Wall-as 100.0 8.3E-30 1.8E-34 194.7 10.6 98 21-124 1-106 (106)
2 PF08488 WAK: Wall-associated 99.6 9.4E-16 2E-20 117.2 7.5 71 151-223 2-76 (103)
3 PF08261 Carcinustatin: Carcin 50.7 7.3 0.00016 16.2 0.5 6 34-39 3-8 (8)
4 PF15240 Pro-rich: Proline-ric 39.8 20 0.00043 30.1 1.9 16 1-16 1-16 (179)
5 PF05953 Allatostatin: Allatos 27.7 30 0.00066 15.9 0.6 7 34-40 5-11 (11)
6 PF05624 LSR: Lipolysis stimul 26.6 44 0.00096 21.9 1.4 10 19-28 35-44 (49)
7 PF09044 Kp4: Kp4; InterPro: 25.9 27 0.00058 27.8 0.4 18 21-39 95-112 (128)
8 PF14353 CpXC: CpXC protein 23.8 39 0.00084 26.1 1.0 18 21-39 38-56 (128)
9 PF07213 DAP10: DAP10 membrane 23.4 43 0.00093 24.4 1.0 26 9-34 9-34 (79)
10 PF07172 GRP: Glycine rich pro 19.6 55 0.0012 24.5 1.0 7 8-14 14-20 (95)
No 1
>PF13947 GUB_WAK_bind: Wall-associated receptor kinase galacturonan-binding
Probab=99.96 E-value=8.3e-30 Score=194.72 Aligned_cols=98 Identities=49% Similarity=0.918 Sum_probs=85.0
Q ss_pred CCCCCCCCCCeeeccCCCCCCCCCCCCCCeEEeccCCCCCCceecCCCccEEEEEeeecc-ceEEEEeecccccccCCCC
Q 047613 21 QRFCPRACGNVSISYPFGIGKGCYFDKSFKVICNYSSGNYPKAYLPGINNLELLDGVSYE-GTIRVNVPIISLKNLSNAR 99 (224)
Q Consensus 21 ~~~C~~~CG~v~IpYPFGig~gC~~~~gF~l~C~~~~~~pp~l~l~~~~~~~V~~~Is~~-~~v~v~~~~~~~~~c~~~~ 99 (224)
+++||++||||+||||||||++|+++++|+|+|+++++ +|+|++.+++ +||+ +|+++ ++++|..++. ..|+...
T Consensus 1 ~~~C~~~CGnv~IpYPFgi~~~C~~~~~F~L~C~~~~~-~~~l~l~~~~-~~V~-~I~~~~~~i~v~~~~~--~~~~~~~ 75 (106)
T PF13947_consen 1 KPGCPSSCGNVSIPYPFGIGPGCGRDPGFELTCNNNTS-PPKLLLSSGN-YEVL-SISYENGTIRVSDPIS--SNCYSSS 75 (106)
T ss_pred CCCCCCccCCEeecCCCccCCCCCCCCCcEEECCCCCC-CceeEecCCc-EEEE-EEecCCCEEEEEeccc--cceecCC
Confidence 68999999999999999999999995599999999866 7889987777 9999 99999 9999999987 6665543
Q ss_pred C-------CccCCCCeEeccCCcEEEEEcccc
Q 047613 100 G-------VNLSGSPLTFSARSNRFTAIGCDD 124 (224)
Q Consensus 100 ~-------~~l~~~pf~~S~~~N~f~~vGC~~ 124 (224)
. +++.. ||.+|+++|+|+++||++
T Consensus 76 ~~~~~~~~~~~~~-~~~~s~~~N~~~~~GC~t 106 (106)
T PF13947_consen 76 SSNSSNSNLSLNG-PFFFSSSSNKFTVVGCNT 106 (106)
T ss_pred CCcccccEEeecC-CceEccCCcEEEEECCCC
Confidence 2 34444 899999999999999985
No 2
>PF08488 WAK: Wall-associated kinase; InterPro: IPR013695 This domain is found together with the eukaryotic protein kinase domain IPR000719 from INTERPRO in plant wall-associated kinases (WAKs) and related proteins. WAKs are serine-threonine kinases which might be involved in signalling to the cytoplasm and are required for cell expansion []. ; GO: 0004674 protein serine/threonine kinase activity, 0016021 integral to membrane
Probab=99.62 E-value=9.4e-16 Score=117.25 Aligned_cols=71 Identities=27% Similarity=0.510 Sum_probs=55.5
Q ss_pred CCCCCccceec--CCC-CceEEEEEEeecccCC-CccccEEEEeeeccccCccCCChhhhccCCCcccEEEEEEEcC
Q 047613 151 RVCYDFLCALA--PNI-TQVFNADLSYFYSQNI-SQKCRSVSVVEENWVGSKYLENPRVLKQQARDIPALLGWGDDK 223 (224)
Q Consensus 151 ~~CsG~GCCq~--p~~-l~~~~v~~~~~~~~~~-~~~c~~afl~e~~wf~~~~l~~~~~~~~~~~~vPvvLdW~i~~ 223 (224)
+.|+|++|||| |.+ ++.|.+++...+.... .++|.+|||+|+.||..+ ..++.. .++.++|||+|+|+|..
T Consensus 2 ~~CsG~~CCQt~iP~~~~qv~~~~i~~~~~~~~~~~~Ck~AFL~d~~~~~~n-~t~p~~-~~~~~y~pv~L~W~i~t 76 (103)
T PF08488_consen 2 SSCSGIGCCQTSIPSGLLQVFNVTIESTDGNNQTSNGCKVAFLVDEDWFSSN-ITDPED-FHAMGYVPVVLDWFIDT 76 (103)
T ss_pred CccCCcceeccCCCCCCceEEEEEeEecCCCcccCCCceEEEEecccccccc-CCChHH-hccCCeeEEEEEEEEec
Confidence 57999999999 775 5679999988665332 389999999999999643 334443 56778999999999963
No 3
>PF08261 Carcinustatin: Carcinustatin peptide
Probab=50.69 E-value=7.3 Score=16.21 Aligned_cols=6 Identities=50% Similarity=1.387 Sum_probs=4.4
Q ss_pred ccCCCC
Q 047613 34 SYPFGI 39 (224)
Q Consensus 34 pYPFGi 39 (224)
||-||+
T Consensus 3 py~fgl 8 (8)
T PF08261_consen 3 PYSFGL 8 (8)
T ss_pred cccccC
Confidence 788874
No 4
>PF15240 Pro-rich: Proline-rich
Probab=39.81 E-value=20 Score=30.10 Aligned_cols=16 Identities=25% Similarity=0.355 Sum_probs=11.3
Q ss_pred ChHHHHHHHHHHhccc
Q 047613 1 MVVLVLLQIILLLWPI 16 (224)
Q Consensus 1 m~~~~~~~~~lll~~~ 16 (224)
|++.||.++||.|.+|
T Consensus 1 MLlVLLSvALLALSSA 16 (179)
T PF15240_consen 1 MLLVLLSVALLALSSA 16 (179)
T ss_pred ChhHHHHHHHHHhhhc
Confidence 7777777777766655
No 5
>PF05953 Allatostatin: Allatostatin; InterPro: IPR010276 This family consists of allatostatins, bombystatins, helicostatins, cydiastatins and schistostatin from several insect species. Allatostatins (ASTs) of the Tyr/Phe-Xaa-Phe-Gly Leu/Ile-NH2 family are a group of insect neuropeptides that inhibit juvenile hormone biosynthesis by the corpora allata [].; GO: 0005184 neuropeptide hormone activity
Probab=27.66 E-value=30 Score=15.90 Aligned_cols=7 Identities=57% Similarity=1.417 Sum_probs=5.3
Q ss_pred ccCCCCC
Q 047613 34 SYPFGIG 40 (224)
Q Consensus 34 pYPFGig 40 (224)
+|-||+|
T Consensus 5 ~Y~FGLG 11 (11)
T PF05953_consen 5 MYSFGLG 11 (11)
T ss_pred ccccCcC
Confidence 4888886
No 6
>PF05624 LSR: Lipolysis stimulated receptor (LSR); InterPro: IPR008664 This domain consists of mammalian LISCH7 protein homologues. LISCH7 is a liver-specific BHLH-ZIP transcription factor.
Probab=26.56 E-value=44 Score=21.89 Aligned_cols=10 Identities=30% Similarity=0.813 Sum_probs=7.8
Q ss_pred ccCCCCCCCC
Q 047613 19 STQRFCPRAC 28 (224)
Q Consensus 19 ~~~~~C~~~C 28 (224)
..-|.||+||
T Consensus 35 vrcpcCp~~c 44 (49)
T PF05624_consen 35 VRCPCCPDRC 44 (49)
T ss_pred EECCCCCCcc
Confidence 6778888887
No 7
>PF09044 Kp4: Kp4; InterPro: IPR015131 Killer toxins are polypeptides secreted by some fungal species that kill sensitive cells of the same or related species, often functioning by creating pores in target cell membranes. The fungal killer toxin KP4 from the corn smut fungus, Ustilago maydis (Smut fungus), is encoded by a resident symbiotic double-stranded RNA virus, Ustilago maydis P4 virus (UmV4), within fungal cells. Unlike most killer toxins, KP4 is a single polypeptide []. KP4 inhibits voltage-gated calcium channels in mammalian cells, which in turn inhibits cell growth and division by blocking calcium import. KP4 adopts a structure consisting of a two-layer alpha/beta sandwich with a left-handed crossover []. ; PDB: 1KPT_B.
Probab=25.89 E-value=27 Score=27.79 Aligned_cols=18 Identities=33% Similarity=0.630 Sum_probs=10.3
Q ss_pred CCCCCCCCCCeeeccCCCC
Q 047613 21 QRFCPRACGNVSISYPFGI 39 (224)
Q Consensus 21 ~~~C~~~CG~v~IpYPFGi 39 (224)
.-||. +||.|.+-||++-
T Consensus 95 dHGC~-~CGSvP~~y~~~g 112 (128)
T PF09044_consen 95 DHGCK-VCGSVPYFYTQGG 112 (128)
T ss_dssp HHT-S-S-EEEE---SSTT
T ss_pred hcCCC-CCCCCCcccCCCC
Confidence 35787 8999999999975
No 8
>PF14353 CpXC: CpXC protein
Probab=23.80 E-value=39 Score=26.06 Aligned_cols=18 Identities=33% Similarity=0.908 Sum_probs=14.1
Q ss_pred CCCCCCCCC-CeeeccCCCC
Q 047613 21 QRFCPRACG-NVSISYPFGI 39 (224)
Q Consensus 21 ~~~C~~~CG-~v~IpYPFGi 39 (224)
.-.|| +|| ...+.|||=.
T Consensus 38 ~~~CP-~Cg~~~~~~~p~lY 56 (128)
T PF14353_consen 38 SFTCP-SCGHKFRLEYPLLY 56 (128)
T ss_pred EEECC-CCCCceecCCCEEE
Confidence 34588 899 5789999964
No 9
>PF07213 DAP10: DAP10 membrane protein; InterPro: IPR009861 This family consists of several mammalian DAP10 membrane proteins. In activated mouse natural killer (NK) cells, the NKG2D receptor associates with two intracellular adaptors, DAP10 and DAP12, which trigger phosphatidyl inositol 3 kinase (PI3K) and Syk family protein tyrosine kinases, respectively. It has been suggested that the DAP10-PI3K pathway is sufficient to initiate NKG2D-mediated killing of target cells [].
Probab=23.39 E-value=43 Score=24.42 Aligned_cols=26 Identities=27% Similarity=0.172 Sum_probs=13.3
Q ss_pred HHHHhcccccccCCCCCCCCCCeeec
Q 047613 9 IILLLWPIEVSTQRFCPRACGNVSIS 34 (224)
Q Consensus 9 ~~lll~~~~~~~~~~C~~~CG~v~Ip 34 (224)
++|||..++++..++=-..||-++-+
T Consensus 9 flLLL~VaAaq~~~gscs~C~~ls~g 34 (79)
T PF07213_consen 9 FLLLLPVAAAQTQPGSCSGCYPLSPG 34 (79)
T ss_pred HHHHHHHhhhcCCCCCCCCccccCHH
Confidence 33445445555555322367766543
No 10
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=19.62 E-value=55 Score=24.51 Aligned_cols=7 Identities=29% Similarity=0.443 Sum_probs=2.7
Q ss_pred HHHHHhc
Q 047613 8 QIILLLW 14 (224)
Q Consensus 8 ~~~lll~ 14 (224)
+++||+.
T Consensus 14 A~lLlis 20 (95)
T PF07172_consen 14 AALLLIS 20 (95)
T ss_pred HHHHHHH
Confidence 3334333
Done!