BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047616
MGSAGFFLICILHSIIALTCGALMMFYTKEIYVFGHGIEVATKLQGSTPHDQLLIQISES
FSGLLLFAIGCLLFMVAFVKDQKFQSFFAKGCVLLHISVAVWRVYIEINLDDLAHDCLRQ
VVGDIVLALSWVFLLVYSWREKYD

High Scoring Gene Products

Symbol, full name Information P value
AT3G15358 protein from Arabidopsis thaliana 3.7e-48
AT1G53035 protein from Arabidopsis thaliana 1.2e-47

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047616
        (144 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1006230226 - symbol:AT3G15358 "AT3G15358" spec...   503  3.7e-48   1
TAIR|locus:505006180 - symbol:AT1G53035 "AT1G53035" speci...   498  1.2e-47   1


>TAIR|locus:1006230226 [details] [associations]
            symbol:AT3G15358 "AT3G15358" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP000413
            HOGENOM:HOG000005986 ProtClustDB:CLSN2688742 EMBL:BT006142
            EMBL:BT008544 EMBL:AK229695 IPI:IPI00532788 RefSeq:NP_974320.1
            UniGene:At.46974 EnsemblPlants:AT3G15358.1 GeneID:2745884
            KEGG:ath:AT3G15358 TAIR:At3g15358 eggNOG:NOG279483
            InParanoid:Q9LJR0 OMA:EDLAFEC PhylomeDB:Q9LJR0
            Genevestigator:Q9LJR0 Uniprot:Q9LJR0
        Length = 144

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 94/144 (65%), Positives = 119/144 (82%)

Query:     1 MGSAGFFLICILHSIIALTCGALMMFYTKEIYVFGHGIEVATKLQGSTPHDQLLIQISES 60
             M S  F +ICILHSIIALT G LMMFYT++  +FGHG ++A KL+GSTPHD+ LIQIS+S
Sbjct:     1 MNSYLFRVICILHSIIALTSGTLMMFYTEKASIFGHGSDIANKLKGSTPHDEQLIQISQS 60

Query:    61 FSGLLLFAIGCLLFMVAFVKDQKFQSFFAKGCVLLHISVAVWRVYIEINLDDLAHDCLRQ 120
             FSGLLLFAIG +LFMV+FVKD++F SFFA G V+L++ +A+WRV  E  ++DLA +C +Q
Sbjct:    61 FSGLLLFAIGLVLFMVSFVKDREFHSFFAAGSVILYMVMALWRVMFEWKIEDLAFECPKQ 120

Query:   121 VVGDIVLALSWVFLLVYSWREKYD 144
              +GDI LA+SWVF LVY+WREKYD
Sbjct:   121 ALGDIALAVSWVFFLVYTWREKYD 144


>TAIR|locus:505006180 [details] [associations]
            symbol:AT1G53035 "AT1G53035" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0007623 "circadian rhythm" evidence=RCA]
            EMBL:CP002684 EMBL:AF380658 EMBL:AY054158 EMBL:AK119066
            IPI:IPI00546618 RefSeq:NP_564621.1 UniGene:At.19104
            UniGene:At.74117 STRING:Q93VW7 EnsemblPlants:AT1G53035.1
            GeneID:841737 KEGG:ath:AT1G53035 TAIR:At1g53035
            HOGENOM:HOG000005986 InParanoid:Q93VW7 OMA:EDLAYEW PhylomeDB:Q93VW7
            ProtClustDB:CLSN2688742 Genevestigator:Q93VW7 Uniprot:Q93VW7
        Length = 150

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 94/144 (65%), Positives = 120/144 (83%)

Query:     1 MGSAGFFLICILHSIIALTCGALMMFYTKEIYVFGHGIEVATKLQGSTPHDQLLIQISES 60
             M  + F +ICILHSIIALT G LMMFYT++  +FG G E+A+KL+GSTPHD+LLIQIS+S
Sbjct:     7 MNPSLFRVICILHSIIALTSGTLMMFYTEKASIFGPGSEIASKLKGSTPHDELLIQISQS 66

Query:    61 FSGLLLFAIGCLLFMVAFVKDQKFQSFFAKGCVLLHISVAVWRVYIEINLDDLAHDCLRQ 120
             FSGLLLFAIG +LFMV+FVKD++F SFFA G V+L++ +A+WRV  E  ++DLA++  +Q
Sbjct:    67 FSGLLLFAIGLVLFMVSFVKDKEFHSFFAGGSVILYVLMAMWRVLFEWKIEDLAYEWPKQ 126

Query:   121 VVGDIVLALSWVFLLVYSWREKYD 144
              +GDI LA+SWVF LVYSWREKYD
Sbjct:   127 ALGDIALAISWVFFLVYSWREKYD 150


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.333   0.145   0.461    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      144       144   0.00091  102 3  11 21  0.45    30
                                                     30  0.48    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  588 (63 KB)
  Total size of DFA:  148 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.98u 0.16s 14.14t   Elapsed:  00:00:01
  Total cpu time:  13.98u 0.16s 14.14t   Elapsed:  00:00:01
  Start:  Tue May 21 02:14:33 2013   End:  Tue May 21 02:14:34 2013

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