Query 047616
Match_columns 144
No_of_seqs 22 out of 24
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 23:02:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047616.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047616hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1mbaa_ a.1.1.2 (A:) Myoglobin 48.6 5.6 0.00041 25.1 2.6 41 48-90 3-45 (146)
2 d1itha_ a.1.1.2 (A:) Hemoglobi 46.5 7 0.00051 25.6 2.9 45 46-90 1-46 (141)
3 d1lghb_ f.3.1.1 (B:) Light-har 37.1 7.6 0.00055 23.2 1.7 23 82-104 12-41 (43)
4 d1jo5a_ f.3.1.1 (A:) Light-har 35.0 6.7 0.00049 23.9 1.2 25 82-106 17-48 (48)
5 d1fsla_ a.1.1.2 (A:) Leghemogl 25.9 18 0.0013 22.4 2.1 42 47-90 3-46 (143)
6 d1c7qa_ c.80.1.2 (A:) Phosphog 25.1 7.8 0.00057 30.1 0.2 32 18-56 385-416 (442)
7 d1azsb_ d.58.29.1 (B:) Adenyly 23.8 11 0.00081 25.4 0.8 32 30-63 138-169 (199)
8 d3d1ka1 a.1.1.2 (A:1-142) Hemo 23.7 28 0.0021 22.0 2.9 41 48-90 3-45 (142)
9 d1lhta_ a.1.1.2 (A:) Myoglobin 23.6 31 0.0022 22.0 3.1 45 46-90 1-45 (153)
10 d2gdma_ a.1.1.2 (A:) Leghemogl 23.4 25 0.0018 21.9 2.5 43 46-90 2-46 (153)
11 d1it2a_ a.1.1.2 (A:) Hagfish h 22.2 25 0.0018 22.5 2.3 42 46-89 10-53 (146)
12 d1wc1a_ d.58.29.1 (A:) Adenyla 22.2 7.8 0.00057 25.2 -0.3 32 29-62 133-164 (197)
13 d1iata_ c.80.1.2 (A:) Phosphog 21.9 9.1 0.00066 31.1 0.0 20 17-36 483-502 (556)
14 d1di0a_ c.16.1.1 (A:) Lumazine 21.7 12 0.00086 25.9 0.6 15 44-58 72-86 (148)
15 d1kz1a_ c.16.1.1 (A:) Lumazine 21.2 10 0.00074 26.4 0.2 20 44-65 80-99 (150)
16 d1nqua_ c.16.1.1 (A:) Lumazine 21.0 10 0.00075 26.4 0.2 22 44-67 82-103 (154)
17 d1q50a_ c.80.1.2 (A:) Phosphog 20.4 10 0.00073 31.1 -0.0 19 17-35 491-509 (561)
18 d1c2ya_ c.16.1.1 (A:) Lumazine 20.4 11 0.00081 26.4 0.2 15 44-58 82-96 (155)
No 1
>d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]}
Probab=48.62 E-value=5.6 Score=25.12 Aligned_cols=41 Identities=22% Similarity=0.186 Sum_probs=29.8
Q ss_pred CccchhhhhhccchhhH--HHHHHHHHHHHHHHhccchhhhhhhh
Q 047616 48 TPHDQLLIQISESFSGL--LLFAIGCLLFMVAFVKDQKFQSFFAK 90 (144)
Q Consensus 48 TPhDqlLIqtSdSFsGl--LLF~IGfllfMVafVkdrefqsFfak 90 (144)
||+|+-+||.| +.-+ =.-.+|--+|---|-+++|.|.+|.+
T Consensus 3 s~~~~~~v~~s--W~~v~~~~~~~g~~if~~lF~~~P~~~~~F~~ 45 (146)
T d1mbaa_ 3 SAAEADLAGKS--WAPVFANKNANGLDFLVALFEKFPDSANFFAD 45 (146)
T ss_dssp CHHHHHHHHHH--HHHHHHTHHHHHHHHHHHHHHHCGGGGGGCTT
T ss_pred CHHHHHHHHHH--HHHHHccHHHHHHHHHHHHHHHCHHHHHHhhh
Confidence 67788888754 2221 12457888888999999999999964
No 2
>d1itha_ a.1.1.2 (A:) Hemoglobin {Innkeeper worm (Urechis caupo) [TaxId: 6431]}
Probab=46.48 E-value=7 Score=25.61 Aligned_cols=45 Identities=22% Similarity=0.011 Sum_probs=34.8
Q ss_pred CCCccchhhhhhcc-chhhHHHHHHHHHHHHHHHhccchhhhhhhh
Q 047616 46 GSTPHDQLLIQISE-SFSGLLLFAIGCLLFMVAFVKDQKFQSFFAK 90 (144)
Q Consensus 46 GSTPhDqlLIqtSd-SFsGlLLF~IGfllfMVafVkdrefqsFfak 90 (144)
|=|+.|.-+||-|= ....-=.-++|--+|+--|-+.+|.|.+|.+
T Consensus 1 GLT~~q~~~i~~sW~~~~~~~~~~~g~~~f~~lF~~~P~~~~~F~~ 46 (141)
T d1itha_ 1 GLTAAQIKAIQDHWFLNIKGCLQAAADSIFFKYLTAYPGDLAFFHK 46 (141)
T ss_dssp CCCHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHHSGGGGGGCTT
T ss_pred CcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHhhh
Confidence 56788888888773 2333335679999999999999999999963
No 3
>d1lghb_ f.3.1.1 (B:) Light-harvesting complex subunits {Rhodospirillum molischianum [TaxId: 1083]}
Probab=37.10 E-value=7.6 Score=23.15 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=15.5
Q ss_pred chhhhhhhhh-------hhhhHHHHHHHHH
Q 047616 82 QKFQSFFAKG-------CVLLHISVAVWRV 104 (144)
Q Consensus 82 refqsFfakg-------c~~Lhv~ma~WR~ 104 (144)
+||++.|-+| +++-|+..-+||=
T Consensus 12 ~EfH~~~~~g~~~F~~iAvvAHiLvw~wrP 41 (43)
T d1lghb_ 12 IAVHDQFKTTFSAFIILAAVAHVLVWVWKP 41 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4555555544 6778888888873
No 4
>d1jo5a_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=34.97 E-value=6.7 Score=23.88 Aligned_cols=25 Identities=28% Similarity=0.814 Sum_probs=17.1
Q ss_pred chhhhhhhhh-------hhhhHHHHHHHHHHH
Q 047616 82 QKFQSFFAKG-------CVLLHISVAVWRVYI 106 (144)
Q Consensus 82 refqsFfakg-------c~~Lhv~ma~WR~~f 106 (144)
+||++.|-.| +++-|+..-+||=.|
T Consensus 17 ~E~H~~~~~g~~~F~~iAvvAH~L~w~wrPWF 48 (48)
T d1jo5a_ 17 QELHSVYMSGLWLFSAVAIVAHLAVYIWRPWF 48 (48)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4566655444 678899998888543
No 5
>d1fsla_ a.1.1.2 (A:) Leghemoglobin {Soybean (Glycine max), isoform A [TaxId: 3847]}
Probab=25.87 E-value=18 Score=22.42 Aligned_cols=42 Identities=14% Similarity=0.229 Sum_probs=30.3
Q ss_pred CCccchhhhhhccchhhH--HHHHHHHHHHHHHHhccchhhhhhhh
Q 047616 47 STPHDQLLIQISESFSGL--LLFAIGCLLFMVAFVKDQKFQSFFAK 90 (144)
Q Consensus 47 STPhDqlLIqtSdSFsGl--LLF~IGfllfMVafVkdrefqsFfak 90 (144)
=|+.+..|||-| ++-+ =.=.+|--+|.--|-+++|.|+.|.+
T Consensus 3 lT~~q~~li~~S--W~~v~~~~~~~g~~~f~~lF~~~P~~~~~F~~ 46 (143)
T d1fsla_ 3 FTEKQDALVSSS--FEAFKANIPQYSVVFYTSILEKAPAAKDLFSF 46 (143)
T ss_dssp CCHHHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHCTTHHHHCGG
T ss_pred CCHHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHCHHHHHhccc
Confidence 466777777754 2221 12368888999999999999999964
No 6
>d1c7qa_ c.80.1.2 (A:) Phosphoglucose isomerase, PGI {Bacillus stearothermophilus [TaxId: 1422]}
Probab=25.15 E-value=7.8 Score=30.15 Aligned_cols=32 Identities=31% Similarity=0.538 Sum_probs=23.1
Q ss_pred HhhchhhhhhhhceeeeccchHHHhhhcCCCccchhhhh
Q 047616 18 LTCGALMMFYTKEIYVFGHGIEVATKLQGSTPHDQLLIQ 56 (144)
Q Consensus 18 lT~G~LMmFy~kei~vfgHG~e~A~KL~GSTPhDqlLIq 56 (144)
-|.|.||++|..++.+-| .|.|--|-||-=++
T Consensus 385 ~~LG~Li~~~E~~t~~~g-------~l~~INpFDQpgVE 416 (442)
T d1c7qa_ 385 YTFGEMVYFFEKACGISG-------HLLGVNPFDQPGVE 416 (442)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHHTSCTTCCTTHH
T ss_pred HHHHHHHHHHHHHHHHHH-------HhhCCCCCCChhHH
Confidence 578999999998877655 46666666664443
No 7
>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.77 E-value=11 Score=25.44 Aligned_cols=32 Identities=19% Similarity=0.395 Sum_probs=26.6
Q ss_pred ceeeeccchHHHhhhcCCCccchhhhhhccchhh
Q 047616 30 EIYVFGHGIEVATKLQGSTPHDQLLIQISESFSG 63 (144)
Q Consensus 30 ei~vfgHG~e~A~KL~GSTPhDqlLIqtSdSFsG 63 (144)
+..++|-...+|.+|...+|+++.+ +|++..-
T Consensus 138 ~y~v~Gd~VN~AaRle~~a~~g~I~--vS~~t~~ 169 (199)
T d1azsb_ 138 QYDIWGNTVNVASRMDSTGVLDKIQ--VTEETSL 169 (199)
T ss_dssp EEEEESHHHHHHHHHHHTCCTTEEE--EEHHHHH
T ss_pred cccccchHHHHHHHHHhcCCCCeEE--ECHHHHH
Confidence 5679999999999999999999965 5776544
No 8
>d3d1ka1 a.1.1.2 (A:1-142) Hemoglobin, alpha-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]}
Probab=23.71 E-value=28 Score=22.01 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=29.4
Q ss_pred CccchhhhhhccchhhH--HHHHHHHHHHHHHHhccchhhhhhhh
Q 047616 48 TPHDQLLIQISESFSGL--LLFAIGCLLFMVAFVKDQKFQSFFAK 90 (144)
Q Consensus 48 TPhDqlLIqtSdSFsGl--LLF~IGfllfMVafVkdrefqsFfak 90 (144)
|+.|.-+||.| ++-+ =...+|--+|.--|.+++|.|.+|.+
T Consensus 3 s~~e~~~I~~s--W~~v~~~~~~~g~~~~~rlF~~~P~~~~~F~~ 45 (142)
T d3d1ka1 3 SDKDKAAVRAL--WSKIGKSSDAIGNDALSRMIVVYPQTKIYFSH 45 (142)
T ss_dssp CHHHHHHHHHH--HHHHGGGHHHHHHHHHHHHHHHSGGGGGGGTT
T ss_pred CHHHHHHHHHH--HHHHHcCHHHHHHHHHHHHHHHChhHHHhhhh
Confidence 44555556543 3322 45568999999999999999999965
No 9
>d1lhta_ a.1.1.2 (A:) Myoglobin {Loggerhead sea turtle (Caretta caretta) [TaxId: 8467]}
Probab=23.62 E-value=31 Score=22.03 Aligned_cols=45 Identities=20% Similarity=0.011 Sum_probs=31.1
Q ss_pred CCCccchhhhhhccchhhHHHHHHHHHHHHHHHhccchhhhhhhh
Q 047616 46 GSTPHDQLLIQISESFSGLLLFAIGCLLFMVAFVKDQKFQSFFAK 90 (144)
Q Consensus 46 GSTPhDqlLIqtSdSFsGlLLF~IGfllfMVafVkdrefqsFfak 90 (144)
|=|+.|.-+||-|=.--.-=.-.+|--+|.--|.+++|.|++|.+
T Consensus 1 gLs~~e~~~I~~sW~~v~~~~~~~g~~~f~rlF~~~P~~~~~F~~ 45 (153)
T d1lhta_ 1 GLSDDEWNHVLGIWAKVEPDLSAHGQEVIIRLFQLHPETQERFAK 45 (153)
T ss_dssp CCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHCGGGGGGCGG
T ss_pred CcCHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHChHHHHHhhh
Confidence 345566666664422111124578999999999999999999964
No 10
>d2gdma_ a.1.1.2 (A:) Leghemoglobin {Yellow lupin (Lupinus luteus) [TaxId: 3873]}
Probab=23.42 E-value=25 Score=21.90 Aligned_cols=43 Identities=12% Similarity=0.153 Sum_probs=30.4
Q ss_pred CCCccchhhhhhccchhhH--HHHHHHHHHHHHHHhccchhhhhhhh
Q 047616 46 GSTPHDQLLIQISESFSGL--LLFAIGCLLFMVAFVKDQKFQSFFAK 90 (144)
Q Consensus 46 GSTPhDqlLIqtSdSFsGl--LLF~IGfllfMVafVkdrefqsFfak 90 (144)
|=|+.+..+||-| +.=+ =.=.+|--+|.--|-+++++|++|..
T Consensus 2 ~Lt~~q~~li~~S--W~~v~~~~~~~g~~~f~~lF~~~P~~k~~F~~ 46 (153)
T d2gdma_ 2 ALTESQAALVKSS--WEEFNANIPKHTHRFFILVLEIAPAAKDLFSF 46 (153)
T ss_dssp CCCHHHHHHHHHH--HHHHHTTHHHHHHHHHHHHHHHCGGGGGGCTT
T ss_pred CCCHHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHCHHHHHHhhh
Confidence 3466677777643 3222 13478888999999999999999953
No 11
>d1it2a_ a.1.1.2 (A:) Hagfish hemoglobin {Inshore hagfish (Eptatretus burgeri) [TaxId: 7764]}
Probab=22.22 E-value=25 Score=22.49 Aligned_cols=42 Identities=12% Similarity=-0.009 Sum_probs=32.6
Q ss_pred CCCccchhhhhhccchhhH--HHHHHHHHHHHHHHhccchhhhhhh
Q 047616 46 GSTPHDQLLIQISESFSGL--LLFAIGCLLFMVAFVKDQKFQSFFA 89 (144)
Q Consensus 46 GSTPhDqlLIqtSdSFsGl--LLF~IGfllfMVafVkdrefqsFfa 89 (144)
+=|+.|.-+||.| ..-+ =.-.+|--+|.--|-+++|.|.+|.
T Consensus 10 ~LT~~e~~lI~~s--W~~v~~~~~~~G~~~f~~lF~~~P~~~~~F~ 53 (146)
T d1it2a_ 10 TLTDGDKKAINKI--WPKIYKEYEQYSLNILLRFLKCFPQAQASFP 53 (146)
T ss_dssp CCCHHHHHHHHHH--HHHHHTTHHHHHHHHHHHHHHHCGGGGGGCT
T ss_pred CCCHHHHHHHHHH--HHHHHcCHHHHHHHHHHHHHHHCccHHHHHH
Confidence 4577888888765 3322 3557899999999999999999995
No 12
>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]}
Probab=22.20 E-value=7.8 Score=25.16 Aligned_cols=32 Identities=19% Similarity=0.454 Sum_probs=25.9
Q ss_pred hceeeeccchHHHhhhcCCCccchhhhhhccchh
Q 047616 29 KEIYVFGHGIEVATKLQGSTPHDQLLIQISESFS 62 (144)
Q Consensus 29 kei~vfgHG~e~A~KL~GSTPhDqlLIqtSdSFs 62 (144)
.|..++|....+|.+|+..++-+|++| |++..
T Consensus 133 ~~y~~~G~~Vn~AaRle~~a~~~~Ili--se~~~ 164 (197)
T d1wc1a_ 133 SDFTAIGPSVNIAARLQEATAPNSIMV--SAMVA 164 (197)
T ss_dssp EEEEEESHHHHHHHHHHHHSCTTCEEE--EHHHH
T ss_pred ccccccccHHHHHHHHHhcCCCCEEEE--eHHHH
Confidence 467899999999999999998888654 55543
No 13
>d1iata_ c.80.1.2 (A:) Phosphoglucose isomerase, PGI {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.88 E-value=9.1 Score=31.15 Aligned_cols=20 Identities=35% Similarity=0.659 Sum_probs=17.0
Q ss_pred HHhhchhhhhhhhceeeecc
Q 047616 17 ALTCGALMMFYTKEIYVFGH 36 (144)
Q Consensus 17 AlT~G~LMmFy~kei~vfgH 36 (144)
+-|.|+||++|..++.|-|-
T Consensus 483 ~~~LG~Lial~E~~t~v~g~ 502 (556)
T d1iata_ 483 PFMLGALVAMYEHKIFVQGI 502 (556)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 35799999999999988773
No 14
>d1di0a_ c.16.1.1 (A:) Lumazine synthase {Brucella abortus [TaxId: 235]}
Probab=21.71 E-value=12 Score=25.91 Aligned_cols=15 Identities=7% Similarity=0.222 Sum_probs=12.1
Q ss_pred hcCCCccchhhhhhc
Q 047616 44 LQGSTPHDQLLIQIS 58 (144)
Q Consensus 44 L~GSTPhDqlLIqtS 58 (144)
.+|.|||++.+-+.+
T Consensus 72 IkGeT~H~e~I~~~v 86 (148)
T d1di0a_ 72 IDGGIYDHDFVATAV 86 (148)
T ss_dssp CCCSSBCCHHHHHHH
T ss_pred ecCCchHHHHHHHHH
Confidence 579999999886653
No 15
>d1kz1a_ c.16.1.1 (A:) Lumazine synthase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=21.21 E-value=10 Score=26.38 Aligned_cols=20 Identities=30% Similarity=0.511 Sum_probs=14.8
Q ss_pred hcCCCccchhhhhhccchhhHH
Q 047616 44 LQGSTPHDQLLIQISESFSGLL 65 (144)
Q Consensus 44 L~GSTPhDqlLIqtSdSFsGlL 65 (144)
.+|.|||.+.+-+.+ ..||.
T Consensus 80 IkGeT~H~e~I~~~v--~~gl~ 99 (150)
T d1kz1a_ 80 IKGSTMHFEYISEAV--VHGLM 99 (150)
T ss_dssp ECCSSSHHHHHHHHH--HHHHH
T ss_pred ecCcchHHHHHHHHH--HHHHH
Confidence 579999999987753 44544
No 16
>d1nqua_ c.16.1.1 (A:) Lumazine synthase {Aquifex aeolicus [TaxId: 63363]}
Probab=20.97 E-value=10 Score=26.45 Aligned_cols=22 Identities=27% Similarity=0.436 Sum_probs=15.3
Q ss_pred hcCCCccchhhhhhccchhhHHHH
Q 047616 44 LQGSTPHDQLLIQISESFSGLLLF 67 (144)
Q Consensus 44 L~GSTPhDqlLIqtSdSFsGlLLF 67 (144)
.+|.|||++..-|. ..+||.=.
T Consensus 82 IkGeT~H~e~I~~~--v~~gl~~l 103 (154)
T d1nqua_ 82 IRGATPHFDYIASE--VSKGLANL 103 (154)
T ss_dssp ECCSSTHHHHHHHH--HHHHHHHH
T ss_pred EeCCchHHHHHHHH--HHHHHHHH
Confidence 57999999998664 34555433
No 17
>d1q50a_ c.80.1.2 (A:) Phosphoglucose isomerase, PGI {Leishmania mexicana [TaxId: 5665]}
Probab=20.43 E-value=10 Score=31.07 Aligned_cols=19 Identities=26% Similarity=0.569 Sum_probs=16.2
Q ss_pred HHhhchhhhhhhhceeeec
Q 047616 17 ALTCGALMMFYTKEIYVFG 35 (144)
Q Consensus 17 AlT~G~LMmFy~kei~vfg 35 (144)
+-|.|.||++|..++.+-|
T Consensus 491 p~~lG~Lial~E~~t~v~g 509 (561)
T d1q50a_ 491 PRALGAIIAMYEHKVLVQG 509 (561)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3589999999999988876
No 18
>d1c2ya_ c.16.1.1 (A:) Lumazine synthase {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=20.38 E-value=11 Score=26.37 Aligned_cols=15 Identities=20% Similarity=0.470 Sum_probs=12.3
Q ss_pred hcCCCccchhhhhhc
Q 047616 44 LQGSTPHDQLLIQIS 58 (144)
Q Consensus 44 L~GSTPhDqlLIqtS 58 (144)
.+|.|||++..-|.+
T Consensus 82 IkGeT~H~e~I~~~v 96 (155)
T d1c2ya_ 82 VKGDTSHYDAVVNSA 96 (155)
T ss_dssp CCCSSTHHHHHHHHH
T ss_pred EcCCchHHHHHHHHH
Confidence 579999999987653
Done!