Query 047617
Match_columns 337
No_of_seqs 142 out of 1406
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 23:03:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047617.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047617hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dth_A Branched-chain amino ac 100.0 9.7E-77 3.3E-81 569.1 36.4 332 6-337 26-372 (372)
2 4dqn_A Putative branched-chain 100.0 2.4E-76 8.3E-81 563.0 38.2 331 5-337 6-344 (345)
3 3dtg_A Branched-chain amino ac 100.0 5.1E-75 1.8E-79 559.4 37.5 328 10-337 30-372 (372)
4 3uzo_A Branched-chain-amino-ac 100.0 1.5E-75 5.2E-80 559.4 33.4 330 4-336 20-358 (358)
5 2coi_A Branched chain aminotra 100.0 6.3E-72 2.2E-76 539.7 39.8 331 4-337 38-386 (386)
6 2a1h_A Branched chain aminotra 100.0 1.2E-71 4.3E-76 535.1 39.4 327 5-336 19-365 (365)
7 3u0g_A Putative branched-chain 100.0 1.6E-66 5.3E-71 492.6 35.2 292 31-336 29-328 (328)
8 2eiy_A ILVE, branched-chain am 100.0 6.7E-64 2.3E-68 472.0 35.0 292 31-337 6-306 (308)
9 1iye_A Branched-chain amino ac 100.0 5.6E-64 1.9E-68 472.7 34.2 292 31-337 7-308 (309)
10 3daa_A D-amino acid aminotrans 100.0 6E-60 2E-64 438.4 32.4 266 32-321 2-275 (277)
11 1i2k_A 4-amino-4-deoxychorisma 100.0 1.5E-57 5.1E-62 420.9 31.1 260 33-320 2-267 (269)
12 3lul_A 4-amino-4-deoxychorisma 100.0 2.2E-57 7.6E-62 420.2 31.9 262 32-324 5-269 (272)
13 2xpf_A 4-amino-4-deoxychorisma 100.0 2.7E-57 9.1E-62 423.7 30.4 262 32-322 23-290 (292)
14 3sno_A Hypothetical aminotrans 100.0 5.4E-57 1.8E-61 425.0 26.6 267 32-321 16-313 (315)
15 3csw_A BCAT, putative branched 100.0 2.5E-55 8.7E-60 409.0 23.2 264 34-334 18-284 (285)
16 2zgi_A Putative 4-amino-4-deox 100.0 1.1E-49 3.9E-54 363.5 18.3 222 33-295 2-229 (246)
17 3qqm_A MLR3007 protein; struct 100.0 1.6E-44 5.6E-49 324.2 21.7 205 56-293 14-220 (221)
18 3ceb_A D-aminoacid aminotransf 100.0 1.1E-40 3.8E-45 293.5 18.6 189 55-288 2-194 (194)
19 2lqo_A Putative glutaredoxin R 37.8 21 0.0007 26.2 2.7 62 252-320 20-81 (92)
20 2r4q_A Phosphotransferase syst 35.1 31 0.0011 26.2 3.3 80 241-325 13-102 (106)
21 2kyr_A Fructose-like phosphotr 32.9 50 0.0017 25.3 4.2 34 252-285 28-70 (111)
22 3mcb_B Transcription factor BT 26.1 99 0.0034 20.7 4.2 43 202-248 5-55 (58)
23 2lfw_B NEPR anti sigma factor; 25.8 51 0.0017 22.4 2.7 25 306-330 24-48 (62)
24 4gf0_A Glutathione S-transfera 23.8 52 0.0018 27.1 3.2 63 252-318 17-79 (215)
25 3lkx_A Transcription factor BT 22.8 91 0.0031 21.5 3.7 45 202-250 5-57 (66)
26 2r48_A Phosphotransferase syst 22.6 86 0.003 23.7 3.9 79 241-324 13-101 (106)
27 2fz5_A Flavodoxin; alpha/beta 21.8 1.6E+02 0.0056 21.8 5.6 42 245-286 10-57 (137)
28 2qho_B E3 ubiquitin-protein li 20.4 34 0.0012 22.1 0.9 22 242-263 18-39 (53)
No 1
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=9.7e-77 Score=569.11 Aligned_cols=332 Identities=36% Similarity=0.658 Sum_probs=307.3
Q ss_pred CCCCCCCCCCCCccCCceEEEEeCCCCeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHHHH
Q 047617 6 ANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMR 85 (337)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~R 85 (337)
.++||++||||.++||||+.++|..+.+|+||+++|.+++.|++.|++|+||||||||||+|++++|++++|++++|++|
T Consensus 26 ~~~~~~~l~fg~~~td~m~~~~~~~~~~W~~g~i~p~~~~~i~~~d~gl~yGdgvFEglkay~~~dG~i~lFrl~~H~~R 105 (372)
T 3dth_A 26 RESILANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAAR 105 (372)
T ss_dssp HHHHHHSCCSSSCCCSEEEEEEEETTTEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHH
T ss_pred cccchhccCCCCccCCceEEEEEcCCCeEECCcEeehHhcccCccccHhhcCcEEEEEEEEEECCCCcEeecCHHHHHHH
Confidence 35899999999999999999999987899999999999999999999999999999999999998999989999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCCCCCC-CcceEEEEEEEEecCCCCCcCCCCCcEEEEEEeecCCccC---
Q 047617 86 MQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPP-GKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHK--- 161 (337)
Q Consensus 86 L~~Sa~~l~i~~~~~~~l~~~i~~ll~~~~~~~p~~-~~~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~--- 161 (337)
|.+||++|+||.++.++|.+++.+++++|+.|+|+. ..+.+|||+++++++..+|+.|+.++.++|++.|.++++.
T Consensus 106 L~~Sa~~L~mp~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~lYiRp~~~~~~~~~G~~p~~~~~~~i~~~p~~~y~~~g~ 185 (372)
T 3dth_A 106 LQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGI 185 (372)
T ss_dssp HHHHHHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCSSCSCCSEEEEEEEEEEESCSSSCSS
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEcCCCcCCcCCCCCeEEEEEEeeCchhhccCC
Confidence 999999999996689999999999999999999986 4468999999988777788888777889999999987764
Q ss_pred CceEEEEEeeceecCCCCCCCCccccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECC----EEEeC
Q 047617 162 GALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKEN----VISTP 237 (337)
Q Consensus 162 ~~~~l~~~~~~~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~----~l~TP 237 (337)
+++++.+++++.|..|++++++|+.+||+++++|+++|+++|+||+||+|..++|+|+|++++|||+++++ +|+||
T Consensus 186 ~~v~l~v~~~~~R~~p~g~~~~K~~gNY~~~~la~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~~~g~~l~TP 265 (372)
T 3dth_A 186 KPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTP 265 (372)
T ss_dssp SCEEEEECSSCCSCCTTSSTTSCCHHHHHTTHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEEC
T ss_pred ccEEEEEccceeccCCCcccchhhHhhhHHHHHHHHHHHHcCCCEEEEEcCCCCCEEEEcCceeEEEEECCCCceEEEEC
Confidence 58999887678899999999999977999999999999999999999999644799999999999999998 99999
Q ss_pred CCCCCCCCChHHHHHHHHHHHcCCcEEEEecCHHHHhcc------ceeeeecCccceEEEEEEEeCCeEEee-CCCccHH
Q 047617 238 PTNGTILPGITRKSIIEIARVLGYQVEERAILVEELFDA------EEVFCTGTAVVVNPVNSITYQDKRTEY-KRGVGTV 310 (337)
Q Consensus 238 ~l~~giL~GitR~~vl~~a~~~Gi~v~e~~i~~~eL~~a------devfltnt~~gi~pV~~I~~~~~~i~~-~~~~g~~ 310 (337)
|++.+|||||||+.||++|+++|++|+|+.++++||.+| ||+|+|||+.+|+||.+|+..++.+.+ +|++||+
T Consensus 266 ~l~~~iL~GITR~~vl~la~~~G~~v~Er~i~~~eL~~a~~~g~~dEvf~tgTa~~i~PV~~Id~~~~~~~i~~g~~Gpv 345 (372)
T 3dth_A 266 ELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEI 345 (372)
T ss_dssp CCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCHH
T ss_pred CCCCCcCHHHHHHHHHHHHHHCCCeEEEEECCHHHHHhhhhcCCccEEEEecccceEEEEEEEccCCceEECCCCCcCHH
Confidence 999999999999999999999999999999999999999 999999999999999999865554433 4679999
Q ss_pred HHHHHHHHHhhHccCCCCCCCCeEECC
Q 047617 311 GQKLYEILTGIQSGCIEDEMGWTVELD 337 (337)
Q Consensus 311 ~~~L~~~~~~~~~~~~~~~~~w~~~~~ 337 (337)
|++|+++|.++|+|+++|+++|+++|.
T Consensus 346 t~~L~~~l~~iq~g~~~d~~~W~~~v~ 372 (372)
T 3dth_A 346 TMALRDTLTGIQRGTFADTHGWMARLN 372 (372)
T ss_dssp HHHHHHHHHHHHHTSSCCTTCCEEECC
T ss_pred HHHHHHHHHHHHcCCCCCCCCCeEECC
Confidence 999999999999999999999999984
No 2
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=100.00 E-value=2.4e-76 Score=563.05 Aligned_cols=331 Identities=38% Similarity=0.670 Sum_probs=302.5
Q ss_pred cCCCCCCCCCCCCccCCceEEEEeCCCCeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHHH
Q 047617 5 YANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAM 84 (337)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~ 84 (337)
.+++||++||||.++||||+.++|..+. |+||+++|.+++.|++.|++|+||||||||||+|++++|++++|++++|++
T Consensus 6 ~~~~~~~~l~fg~~~td~m~~~~~~~~~-w~nG~~vp~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~ 84 (345)
T 4dqn_A 6 TVDLDWKNLGFEYHKLPFRYISYYKDGK-WDDGKLTEDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAE 84 (345)
T ss_dssp CCCCCGGGCCSCCCCCSCEEEEEEETTE-ECCCEEESCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHH
T ss_pred cCCCCchhcCCCCcccCceEEEEecCCc-EECCEEeEhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHH
Confidence 4689999999999999999999998776 999999999999999999999999999999999999899988999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCc-ceEEEEEEEEecCCCCCcCCCCCcEEEEEEeecCCccC--
Q 047617 85 RMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGK-GTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHK-- 161 (337)
Q Consensus 85 RL~~Sa~~l~i~~~~~~~l~~~i~~ll~~~~~~~p~~~~-~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~-- 161 (337)
||.+||++|+|+.++.++|.++|.+++++|+.|+|+... +++|||+++++++..+|+.|+.+++++|++.|.++++.
T Consensus 85 RL~~Sa~~L~i~~~~~~~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~~ 164 (345)
T 4dqn_A 85 RLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGG 164 (345)
T ss_dssp HHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSSCEEEEEEEEEEESCCCSSCCCSEEEEEEEEEEECCSCTTS
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEeCCCccCCCCCCCeEEEEEEEECccccccC
Confidence 999999999999559999999999999999999987533 48999999888776778877667889999999877653
Q ss_pred -CceEEEEEeeceecCCCCCCCCccccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEE-ECCEEEeCCC
Q 047617 162 -GALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVV-KENVISTPPT 239 (337)
Q Consensus 162 -~~~~l~~~~~~~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v-~~~~l~TP~l 239 (337)
+|+++.+++++.|..|++++++|+..||+++++|+++|+++|+||+||+|.+++|+|+|++++|||++ ++|+|+|||
T Consensus 165 ~~gv~l~~~~~~~R~~~~~~~~~Kt~~nyl~~vla~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~g~l~TP~- 243 (345)
T 4dqn_A 165 LAPTNFLIQDDYDRAAPHGTGAAKVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPL- 243 (345)
T ss_dssp CCCEEEEECTTCCSSCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSCEEEECTTTSCBEEEETTEEEEEEETTCEEEECC-
T ss_pred CCCEEEEEccceEecCCCccccccccccCHHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEcCCceEEEEecCCEEEeCC-
Confidence 68999987657899998899999955999999999999999999999999633599999999999998 899999999
Q ss_pred CCCCCCChHHHHHHHHHHH-cCCcEEEEecCHHHHhccceeeeecCccceEEEEEEEeCCeEEee-CC-CccHHHHHHHH
Q 047617 240 NGTILPGITRKSIIEIARV-LGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEY-KR-GVGTVGQKLYE 316 (337)
Q Consensus 240 ~~giL~GitR~~vl~~a~~-~Gi~v~e~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~-~~-~~g~~~~~L~~ 316 (337)
+.++|+||||+.||++|++ +|++|+|+.++++||.+|||+|+|||+++|+||++|+..++.+.+ ++ ++||++++|++
T Consensus 244 ~~~iL~GitR~~vl~la~~~~g~~v~e~~i~~~el~~adevf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L~~ 323 (345)
T 4dqn_A 244 SPSILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDFHVFYSETEVGPVTHKLYD 323 (345)
T ss_dssp CTTSCCCHHHHHHHHHHHHTTCCEEEECCCBTTCGGGEEEEEEEETTTEEEEEEEEEETTEEEESSCSSSCCHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHhhhHHhhhcchhHEEEEEEECcccceeeeCCCCCcCHHHHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999999854444333 33 69999999999
Q ss_pred HHHhhHccCCCCCCCCeEECC
Q 047617 317 ILTGIQSGCIEDEMGWTVELD 337 (337)
Q Consensus 317 ~~~~~~~~~~~~~~~w~~~~~ 337 (337)
+|.++++|+.+|+++|+++|+
T Consensus 324 ~~~~i~~g~~~~~~~W~~~v~ 344 (345)
T 4dqn_A 324 ELTGIQFGDVKAPEGWIYKVD 344 (345)
T ss_dssp HHHHHHTTSSCCCTTCEEETT
T ss_pred HHHHHHcCCCCCCCCCceECC
Confidence 999999999999999999986
No 3
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=5.1e-75 Score=559.39 Aligned_cols=328 Identities=37% Similarity=0.668 Sum_probs=301.4
Q ss_pred CCCCCCCCccCCceEEEEeCCCCeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHHHHHHHH
Q 047617 10 WDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMG 89 (337)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~~S 89 (337)
++++|||.+|||||+.++|..+..|+||+++|.+++.|++.+++|||||||||+||+|++.||++.+||+++|++||.+|
T Consensus 30 ~~~~~fg~~~tdhm~~~~~~~~~gW~ng~ivp~~~~~i~p~~~~lhYG~gvFEgiraY~~~dG~i~~Fr~~~h~~Rl~~S 109 (372)
T 3dtg_A 30 LANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSS 109 (372)
T ss_dssp HHSCCSSSCCCSEEEEEEEETTTEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHH
T ss_pred hhccCCCCCccceeEEEEECCCCcEeCCEEEEchhceeCcchhhhhccceeeeeEEEEECCCCeEEeeCchHHHHHHhhc
Confidence 46789999999999999998888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCc-ceEEEEEEEEecCCCCCcCCCCCcEEEEEEeecCCccC---CceE
Q 047617 90 AERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGK-GTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHK---GALN 165 (337)
Q Consensus 90 a~~l~i~~~~~~~l~~~i~~ll~~~~~~~p~~~~-~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~---~~~~ 165 (337)
|++|.||.++.+.+.+++.++++.+..|+|.... +++|||++++++.+.+|+.|...+.+++.+.|..+++. ++..
T Consensus 110 a~~l~iP~~~~e~~~~~~~~l~~~~~~~v~~~~~~~~~YiRp~~~~~~~~lgv~p~~~~~~~ii~~p~~~~~~~~~~~~~ 189 (372)
T 3dtg_A 110 ARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVS 189 (372)
T ss_dssp HHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCCSCSCCSEEEEEEEEEEESCSSTTSSSCEE
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHhhhhccccCCCCceEEEEEEEeecCccCcCCCCCceeeeEecccccccccCcccce
Confidence 9999999878899999999999999999987543 58999999998887889988888888888999877664 4566
Q ss_pred EEEEeeceecCCCCCCCCccccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEE----ECCEEEeCCCCC
Q 047617 166 LVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVV----KENVISTPPTNG 241 (337)
Q Consensus 166 l~~~~~~~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v----~~~~l~TP~l~~ 241 (337)
+.+..++.|..|......|..+||+++++++++|+++||||+||+|..++|+|+|++++|||+| ++|+|+|||+++
T Consensus 190 ~~~~~~~~R~~p~~~~~~K~~gNY~~~~la~~eA~~~G~deal~Ld~~~~g~V~E~~~sNiF~V~~~~kdg~liTPpl~~ 269 (372)
T 3dtg_A 190 VWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSG 269 (372)
T ss_dssp EEECSSCCSCCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEECCCCS
T ss_pred eecccceeecCcCCcchHHhcCCcchhhhHHHHHHhcCcchhhhhccccccceeecCceEEEEEEecCCCceEEeCCccc
Confidence 6666677899998888899989999999999999999999999999655789999999999999 678999999999
Q ss_pred CCCCChHHHHHHHHHHHcCCcEEEEecCHHHHhcc------ceeeeecCccceEEEEEEEeCCeEEe-eCCCccHHHHHH
Q 047617 242 TILPGITRKSIIEIARVLGYQVEERAILVEELFDA------EEVFCTGTAVVVNPVNSITYQDKRTE-YKRGVGTVGQKL 314 (337)
Q Consensus 242 giL~GitR~~vl~~a~~~Gi~v~e~~i~~~eL~~a------devfltnt~~gi~pV~~I~~~~~~i~-~~~~~g~~~~~L 314 (337)
+||+||||+.||++|+++|++|+|++++++||.+| ||+|+|||+.+|+||.+|++.+..+. .+|++||+|++|
T Consensus 270 ~iL~GITR~sVi~LA~~~Gi~V~Er~it~~El~~A~~~~~~dEvF~tGTaa~I~PV~~Id~~~~~~~ig~G~~Gpvt~~L 349 (372)
T 3dtg_A 270 SLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMAL 349 (372)
T ss_dssp SSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCHHHHHH
T ss_pred cccccHHHHHHHHHHHHCCceEEEEeCCHHHHHHHhhcCCCcEEEECCCcceEEEEEEEecCCceEEcCCCCcCHHHHHH
Confidence 99999999999999999999999999999999998 99999999999999999987665433 367899999999
Q ss_pred HHHHHhhHccCCCCCCCCeEECC
Q 047617 315 YEILTGIQSGCIEDEMGWTVELD 337 (337)
Q Consensus 315 ~~~~~~~~~~~~~~~~~w~~~~~ 337 (337)
+++|.++|+|+.+|+++|+++|+
T Consensus 350 ~~~~~~iq~G~~~d~~~W~~~v~ 372 (372)
T 3dtg_A 350 RDTLTGIQRGTFADTHGWMARLN 372 (372)
T ss_dssp HHHHHHHHTTSSCCTTCCEEECC
T ss_pred HHHHHHHHCCCCCCCCCCcEeCC
Confidence 99999999999999999999986
No 4
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=100.00 E-value=1.5e-75 Score=559.44 Aligned_cols=330 Identities=38% Similarity=0.672 Sum_probs=297.7
Q ss_pred ccCCCCCCCCCCCCccCCceEEEEeCCCCeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHH
Q 047617 4 EYANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENA 83 (337)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl 83 (337)
+++++||++||||.++||||+.++|..+. |+||+++|.+++.|++.|++|+||||||||||+|++++|++++|++++|+
T Consensus 20 ~~~~~~~~~l~fg~~~td~m~~~~~~~~~-w~ng~i~p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~~Hl 98 (358)
T 3uzo_A 20 KLADIDWSTLGFSYIRTDLRYLAHWKDGE-WDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNA 98 (358)
T ss_dssp ----CCGGGCCSCCCCCSCEEEEEEETTE-ECCCEEESCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHHHHH
T ss_pred cccCCCcccCCCCCcccCeeEEEEEeCCc-EECCEEeEcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHHHHH
Confidence 67789999999999999999999998776 99999999999999999999999999999999999989999999999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCc-ceEEEEEEEEecCCCCCcCCCCCcEEEEEEeecCCccC-
Q 047617 84 MRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGK-GTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHK- 161 (337)
Q Consensus 84 ~RL~~Sa~~l~i~~~~~~~l~~~i~~ll~~~~~~~p~~~~-~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~- 161 (337)
+||.+||++|+||.++.++|.+++.+++++|+.|+|+.+. +++|||++++++...+|+.|+..+.+++++.|.+++++
T Consensus 99 ~RL~~Sa~~L~ip~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~G~~p~~~~~~~i~~~P~~~~~~~ 178 (358)
T 3uzo_A 99 ARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFKG 178 (358)
T ss_dssp HHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSCCEEEEEEEEEEESSCCSSSCCSEEEEEEEEEEECCSSCS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCCceEEEEEEEEecCCccccCCCCCeEEEEEEecChhhhhc
Confidence 9999999999999559999999999999999999987533 48999999998877788887767788899999887764
Q ss_pred --CceEEEEEeeceecCCCCCCCCccccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEE-CCE-EEeC
Q 047617 162 --GALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVK-ENV-ISTP 237 (337)
Q Consensus 162 --~~~~l~~~~~~~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~-~~~-l~TP 237 (337)
+++++.+++ ++|..|..++++|+.+||+++++|+++|+++|+||+||+|.+++|+|+|++++|||+++ ||+ |+||
T Consensus 179 g~~~v~l~~~~-~~R~~p~~~~~~K~~~NYl~~vla~~eA~~~G~~e~l~ld~~~~g~V~E~~~sNif~v~~dg~~l~TP 257 (358)
T 3uzo_A 179 GLTPTNFITSD-YDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAITQDGQKFVTP 257 (358)
T ss_dssp SSCCEEEECCS-CCSSCTTSSTTSCBHHHHHHHHHHHHHHHHTTCSEECCBCTTTSCBBCBCSSSEEEEEETTSCEEEEE
T ss_pred CCccEEEEEEe-eeccCCCccccccchhhhHHHHHHHHHHHHcCCCEEEEEeCCCCCeEEEcCCeeEEEEECCCeEEEEC
Confidence 568888764 88999988899997569999999999999999999999997334999999999999995 788 9999
Q ss_pred CCCCCCCCChHHHHHHHHHHH-cCCcEEEEecCHHHHhccceeeeecCccceEEEEEEEeCCeEEeeC--CCccHHHHHH
Q 047617 238 PTNGTILPGITRKSIIEIARV-LGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYK--RGVGTVGQKL 314 (337)
Q Consensus 238 ~l~~giL~GitR~~vl~~a~~-~Gi~v~e~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~--~~~g~~~~~L 314 (337)
| ++++|+||||+.||++|++ +|++|+|+.++++||.+|||+|+|||+++|+||.+|+..++.+.+. +++||++++|
T Consensus 258 ~-~~~iL~GItR~~vl~la~~~~g~~v~e~~i~~~eL~~adEvf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L 336 (358)
T 3uzo_A 258 Q-SPSILPSITKYSLLWLAEHRLGLEVEEGDIRIDELGKFSEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVTRRL 336 (358)
T ss_dssp C-CTTSCCCHHHHHHHHHHHHTTCCEEEEECCBTTCGGGEEEEEEECTTTSSEEEEEEEETTEEEESSCSSSCCHHHHHH
T ss_pred C-cCCcccCHHHHHHHHHHHhhcCCeEEEEECCHHHHHhhcceeEEcCcceEEEEEEECcccceeEeCCCCCcCHHHHHH
Confidence 9 8999999999999999999 9999999999999999999999999999999999998554433332 3599999999
Q ss_pred HHHHHhhHccCCCCCCCCeEEC
Q 047617 315 YEILTGIQSGCIEDEMGWTVEL 336 (337)
Q Consensus 315 ~~~~~~~~~~~~~~~~~w~~~~ 336 (337)
+++|.++++|+.+|+++|+++|
T Consensus 337 ~~~~~~iq~g~~~~~~~W~~~v 358 (358)
T 3uzo_A 337 YDELVGIQYGDKEAPEGWIVKV 358 (358)
T ss_dssp HHHHHHHHTTSSCCCTTCCEEC
T ss_pred HHHHHHHHcCCCCCCCCCceEC
Confidence 9999999999999999999986
No 5
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=100.00 E-value=6.3e-72 Score=539.70 Aligned_cols=331 Identities=32% Similarity=0.517 Sum_probs=299.9
Q ss_pred ccCCCCCCCCCCCCccCCceEEEEeCCCCeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHH
Q 047617 4 EYANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENA 83 (337)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl 83 (337)
+..++||++||||.++||||+.++|..+.+|+||+++|.+++.|++.|++|+||+|+|||||+|++.+|++++|++++|+
T Consensus 38 ~~~~~~~~~~~fg~~~td~m~~~~~~~~~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEg~k~y~g~dg~i~~frld~H~ 117 (386)
T 2coi_A 38 LKEKPDPNNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNM 117 (386)
T ss_dssp CCCCCCCC-CCTTCCCCSEEEEEEEETTTEECCCEEEECCCEEECTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHH
T ss_pred cccCCCccccCCccccccceEEEEeCCCcEEECCEEeecccCccCcccchhhcCceeEEEEEEEeCCCCceeecCHHHHH
Confidence 34578999999999999999999998888999999999999999999999999999999999999999998899999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCcceEEEEEEEEecCCCCCcCCCCCcEEEEEEeecCCccC--
Q 047617 84 MRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHK-- 161 (337)
Q Consensus 84 ~RL~~Sa~~l~i~~~~~~~l~~~i~~ll~~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~-- 161 (337)
+||.+||++|+||.++.++|.+++.++++.|+.|+|+...+.+|||+++++++..+++.|+.+++++|.+.|.++++.
T Consensus 118 ~RL~~Sa~~l~~p~~~~e~~~~~i~~lv~~~~~~vp~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~y~~~~ 197 (386)
T 2coi_A 118 DRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSG 197 (386)
T ss_dssp HHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCSSSSCEEEEEEEEEECCCSCSCSCCSEEEEEEEEEEECCCC---
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEEECccccccc
Confidence 999999999999955899999999999999998888644458999999988776688887778899999999987763
Q ss_pred --CceEEEEEeeceecCCCCCCCCccccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEE---CC--EE
Q 047617 162 --GALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVK---EN--VI 234 (337)
Q Consensus 162 --~~~~l~~~~~~~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~---~~--~l 234 (337)
+++++.+++.+.|..|..++++|+.+||+.+++++++|+++|+||+||+|.. +|+|+|++++|||+++ +| +|
T Consensus 198 ~~~~v~l~~~~~~~r~~p~~~g~~K~~~Ny~~~~la~~eA~~~G~de~L~ld~~-~g~V~E~~~sNiF~v~~~~~g~~~l 276 (386)
T 2coi_A 198 TFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGE-DHQITEVGTMNLFLYWINEDGEEEL 276 (386)
T ss_dssp --CCEEEEECTTCCSCCTTSSTTSCCTHHHHTTHHHHHHHHTTTCSEEEEEETT-TTEEEEETTEEEEEEEECTTSCEEE
T ss_pred ccccEEEEEcccccccCCCcccccccccChHHHHHHHHHHHHcCCCEEEEEECC-CCEEEEeCCceEEEEEEcCCCCEEE
Confidence 5799988765668788778899986699999999999999999999999932 7999999999999997 88 99
Q ss_pred EeCCCCCCCCCChHHHHHHHHHHH-cCCcEEEEecCHHHHhcc------ceeeeecCccceEEEEEEEeCCeEEee--CC
Q 047617 235 STPPTNGTILPGITRKSIIEIARV-LGYQVEERAILVEELFDA------EEVFCTGTAVVVNPVNSITYQDKRTEY--KR 305 (337)
Q Consensus 235 ~TP~l~~giL~GitR~~vl~~a~~-~Gi~v~e~~i~~~eL~~a------devfltnt~~gi~pV~~I~~~~~~i~~--~~ 305 (337)
+|||+++++|+||||+.||++|++ +|++|+|+.++++||.+| ||+|+|||+++|+||.+|++.++.+.. ++
T Consensus 277 ~TP~l~~~iL~GITR~~vl~la~~~~G~~V~Er~i~~~eL~~A~~~g~~dEvF~tgTa~~i~PV~~I~~~~~~~~~~~~g 356 (386)
T 2coi_A 277 ATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTME 356 (386)
T ss_dssp EECCCSSSSCCCHHHHHHHHHHHHHCSSEEEECCCBHHHHHHHHTTTCEEEEEEEETTTEEEEEEEEEESSSEEECGGGG
T ss_pred EECCCCCCccHHHHHHHHHHHHHhccCCcEEEEECCHHHHHHHHhcCCccEEEEecceeEEEEEEEEeeCCeEEecCCCC
Confidence 999999999999999999999999 899999999999999999 999999999999999999877887754 34
Q ss_pred CccHHHHHHHHHHHhhHccCCCCCCCCeEECC
Q 047617 306 GVGTVGQKLYEILTGIQSGCIEDEMGWTVELD 337 (337)
Q Consensus 306 ~~g~~~~~L~~~~~~~~~~~~~~~~~w~~~~~ 337 (337)
++||++++|+++|.++|.|+++ .+|+++|+
T Consensus 357 ~~g~vt~~L~~~l~~iq~g~~~--~~W~~~v~ 386 (386)
T 2coi_A 357 NGPKLASRILSKLTDIQYGREE--RDWTIVLS 386 (386)
T ss_dssp GTTHHHHHHHHHHHHHHTTSSC--CTTEEEC-
T ss_pred CcCHHHHHHHHHHHHHhCCCCC--CCCeEeCC
Confidence 6899999999999999999997 59999984
No 6
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=100.00 E-value=1.2e-71 Score=535.11 Aligned_cols=327 Identities=32% Similarity=0.549 Sum_probs=296.6
Q ss_pred cCCCCC-CCCCCCCccCCceEEEEeCCCCeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHH
Q 047617 5 YANVNW-DGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENA 83 (337)
Q Consensus 5 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl 83 (337)
...+|| ++||||.++||||+.++|.. .+|+||+++|.+++.|++.|++|+||||+|||||+|++++|++.+|++++|+
T Consensus 19 ~~~~~~~~~l~fg~~~~d~m~~~~~~~-~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEt~r~y~g~dG~i~~f~l~~Hl 97 (365)
T 2a1h_A 19 HKKPGPGEPLVFGKTFTDHMLMVEWND-KGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNM 97 (365)
T ss_dssp CCCCCTTSCCCTTCSCCSEEEEEEEET-TEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHH
T ss_pred cCCCccccccCcCCccccceeeeeccc-CeEECCEEeEcccceeCccchhhhcCceeEeEEEEEecCCCceeecCHHHHH
Confidence 346778 99999999999999999987 8999999999999999999999999999999999999889988899999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCcceEEEEEEEEecCCCCCcCCCCCcEEEEEEeecCCccC--
Q 047617 84 MRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHK-- 161 (337)
Q Consensus 84 ~RL~~Sa~~l~i~~~~~~~l~~~i~~ll~~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~-- 161 (337)
+||.+||++|+|+.++.++|.+++.++++.|+.|+|......+|||+++++++..+++.|+.+++++|.+.|+++++.
T Consensus 98 ~RL~~Sa~~l~~~~~~~~~l~~~i~~lv~~~~~~~p~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~g 177 (365)
T 2a1h_A 98 DRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGG 177 (365)
T ss_dssp HHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCCCCCCCcEEEEEEEECccccccc
Confidence 999999999999955899999999999999988887543347999999987766678877777889999999987653
Q ss_pred --CceEEEEEeeceecCCCCCCCCccccchhhhHHHHHHHHHCCCCeEEEE-ecCCCCeEEecCceeEEEEE---CCE--
Q 047617 162 --GALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFL-DAVTGKYVEEASTSNIFVVK---ENV-- 233 (337)
Q Consensus 162 --~~~~l~~~~~~~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~Lll-n~~~~g~v~E~s~sNvf~v~---~~~-- 233 (337)
+++++.+++.+.|..|+.++++|+.+||+.+++++++|+++|+||+||+ |. +|+|+|++++|||+++ +|+
T Consensus 178 ~~~~v~l~~~~~~~R~~~~~~~~~Kt~~ny~~~~la~~eA~~~G~de~L~l~d~--~G~V~E~~~sNif~v~~~~dg~~~ 255 (365)
T 2a1h_A 178 SVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGP--DHQLTEVGTMNIFVYWTHEDGVLE 255 (365)
T ss_dssp SCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETT--TTEEEEETTEEEEEEEECTTSCEE
T ss_pred cccceEEEEccccccCCCCccchhchhhccHHHHHHHHHHHHcCCCeEEEEECC--CCeEEEcCceEEEEEEecCCCcEE
Confidence 5699988765678888889999996699999999999999999999999 65 7999999999999996 675
Q ss_pred EEeCCCCCCCCCChHHHHHHHHHHHc-CCcEEEEecCHHHHhcc------ceeeeecCccceEEEEEEEeCCeEEee--C
Q 047617 234 ISTPPTNGTILPGITRKSIIEIARVL-GYQVEERAILVEELFDA------EEVFCTGTAVVVNPVNSITYQDKRTEY--K 304 (337)
Q Consensus 234 l~TP~l~~giL~GitR~~vl~~a~~~-Gi~v~e~~i~~~eL~~a------devfltnt~~gi~pV~~I~~~~~~i~~--~ 304 (337)
|+|||+++++|+||||+.||++|+++ |++|+|+.++++||.+| ||+|+|||+++|+||.+|+++++.+.+ +
T Consensus 256 l~TP~l~~~iL~GITR~~vl~la~~~~G~~v~Er~i~~~eL~~A~~~g~~dEvf~tnt~~~i~PV~~i~~~~~~~~~~~~ 335 (365)
T 2a1h_A 256 LVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTM 335 (365)
T ss_dssp EEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTG
T ss_pred EEeCCCCCCccccHHHHHHHHHHHhcCCCceEEEeCCHHHHHHHHhcCCccEEEEcCCeeEEEEEEEEEeCCeEEeeCCC
Confidence 99999999999999999999999995 99999999999999999 999999999999999999876887654 3
Q ss_pred CCccHHHHHHHHHHHhhHccCCCCCCCCeEEC
Q 047617 305 RGVGTVGQKLYEILTGIQSGCIEDEMGWTVEL 336 (337)
Q Consensus 305 ~~~g~~~~~L~~~~~~~~~~~~~~~~~w~~~~ 336 (337)
+++||++++|+++|.++++|+.+ ++|+++|
T Consensus 336 g~~g~vt~~L~~~~~~~~~g~~~--~~W~~~v 365 (365)
T 2a1h_A 336 ENGPELILRFQKELKEIQYGIRA--HEWMFPV 365 (365)
T ss_dssp GGTTHHHHHHHHHHHHHHTTSSC--CTTEEEC
T ss_pred CCcCHHHHHHHHHHHHHHcCCCC--CCCeeeC
Confidence 57899999999999999999988 8999986
No 7
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=100.00 E-value=1.6e-66 Score=492.56 Aligned_cols=292 Identities=27% Similarity=0.464 Sum_probs=263.7
Q ss_pred CCeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHHHHHHHHHHhcCCCCC-CHHHHHHHHHH
Q 047617 31 GQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSP-TIEQFVNAVKQ 109 (337)
Q Consensus 31 ~~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~~Sa~~l~i~~~-~~~~l~~~i~~ 109 (337)
+.+|+||+++|.+++.|++.|++|+||||+|||||+|++.+|++++|++++|++||.+||++|+|+.| +.++|.+++.+
T Consensus 29 ~~~w~nG~~vp~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~ 108 (328)
T 3u0g_A 29 GKIWMDGKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVPFDQETLEAAQRD 108 (328)
T ss_dssp SEEEETTEEEEGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHH
T ss_pred CEEEECCEEeehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Confidence 46899999999999999999999999999999999998777866689999999999999999999987 99999999999
Q ss_pred HHHHcCCCCCCCCcceEEEEEEEEecCCCCCcCCCC-CcEEEEEEeecCCccC-----CceEEEEEeeceecCCCC-CCC
Q 047617 110 IVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPAS-EYTFVTYASPVGNYHK-----GALNLVVEEKFRRATPGG-TGG 182 (337)
Q Consensus 110 ll~~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~~-~~~~~i~~~p~~~~~~-----~~~~l~~~~~~~r~~~~~-~~~ 182 (337)
++++|+. .++|||++++++...+++.|.. .++++|.+.|.++++. +|+++.++ ++.|..|+. +++
T Consensus 109 lv~~n~~-------~~~~iR~~vtrg~~~~g~~p~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~-~~~R~~~~~~~~~ 180 (328)
T 3u0g_A 109 VVRENKL-------ESCYLRPIIWIGSEKLGVSAKGNTIHVAIAAWPWGAYLGEEGLAKGIRVKTS-SFTRHHVNVSMVR 180 (328)
T ss_dssp HHHHTTC-------SSEEEEEEEEECSSCCSTTCCCCCEEEEEEEEECC----HHHHHHCEEEEEC-SSCCCCTTTSCTT
T ss_pred HHHhcCC-------CCeEEEEEEEecCCCCCcCCCCCCcEEEEEEEEcCCCCChhhhcCCEEEEEe-eeeecCCCCcccc
Confidence 9999873 5789999997665556776543 5788888999876542 68999886 477887776 799
Q ss_pred CccccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECCEEEeCCCCCCCCCChHHHHHHHHHHHcCCc
Q 047617 183 VKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQ 262 (337)
Q Consensus 183 ~Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~~l~TP~l~~giL~GitR~~vl~~a~~~Gi~ 262 (337)
+|++.||+++++|+++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||++. +|+||||+.|+++|+++|++
T Consensus 181 ~K~t~nyl~~vla~~eA~~~G~~e~l~ld~--~g~v~E~~~sNif~v~~g~l~TP~~~~-iL~GitR~~vl~~a~~~g~~ 257 (328)
T 3u0g_A 181 AKASGWYVNSILANQEATADGYDEALLLDV--DGYVSEGSGENFFLVNRGKLYTPDLAS-CLDGITRDTVITLAKEAGIE 257 (328)
T ss_dssp SCBGGGHHHHHHHHHHHHHTTCSEEEEECT--TSCEEEESSSEEEEEETTEEEECCSSS-SCCCHHHHHHHHHHHHTTCC
T ss_pred hhhhhhhHHHHHHHHHHHHCCCCEEEEECC--CCcEEEcCceeEEEEECCEEEeCCccc-cchHHHHHHHHHHHHHcCCe
Confidence 995469999999999999999999999997 799999999999999999999999988 99999999999999999999
Q ss_pred EEEEecCHHHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHHHHHHHHHHHhhHccCCCCCCCCeEEC
Q 047617 263 VEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTVEL 336 (337)
Q Consensus 263 v~e~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~~~~L~~~~~~~~~~~~~~~~~w~~~~ 336 (337)
|+|+.++++||.+|||+|+|||++||+||++|+ ++.++ ++++||++++|+++|.++++|+.+|+++|+++|
T Consensus 258 v~e~~i~~~eL~~adevf~tns~~~v~PV~~Id--~~~~~-~g~~g~vt~~L~~~~~~~~~g~~~~~~~W~~~v 328 (328)
T 3u0g_A 258 VIEKRITRDEVYTADEAFFTGTAAEVTPIRELD--NRTIG-GGARGPITEKLQSAFFDVVNGKSAKHADWLTKI 328 (328)
T ss_dssp EEECCCCHHHHHTCSEEEEEETTTEEEEEEEET--TEECT-TSSCCHHHHHHHHHHHHHHTTCCSTTGGGEEEC
T ss_pred EEEEeCCHHHHhhCCEEEEEcchhhEEEEEEEC--CEECC-CCCCCHHHHHHHHHHHHHHcCCCCCCCCCceeC
Confidence 999999999999999999999999999999994 88763 678999999999999999999999999999987
No 8
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=100.00 E-value=6.7e-64 Score=471.96 Aligned_cols=292 Identities=31% Similarity=0.444 Sum_probs=259.8
Q ss_pred CCeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHHHHHHHHHHhcCCCCC-CHHHHHHHHHH
Q 047617 31 GQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSP-TIEQFVNAVKQ 109 (337)
Q Consensus 31 ~~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~~Sa~~l~i~~~-~~~~l~~~i~~ 109 (337)
+.+|+||+++|.+++.|++.|+|++||||+|||||++++.+|. .+|++++|++||.+||+.|+|+.| +.+++.+.+.+
T Consensus 6 ~~~~~nG~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~ 84 (308)
T 2eiy_A 6 GLIWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGP-AIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKE 84 (308)
T ss_dssp CSEEETTEEECGGGCCCCTTCHHHHHCCEEECCEEEECCTTSC-EEETHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHH
T ss_pred CeEEECCEEeEhHHCccCccchHhhhcceEEEEEEEECCCCcc-cccCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 4689999999999999999999999999999999999766665 478999999999999999999977 89999999999
Q ss_pred HHHHcCCCCCCCCcceEEEEEEEEecCCCCCcCCC--CCcEEEEEEeecCCcc-----CCceEEEEEeeceecCCCC-CC
Q 047617 110 IVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPA--SEYTFVTYASPVGNYH-----KGALNLVVEEKFRRATPGG-TG 181 (337)
Q Consensus 110 ll~~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~--~~~~~~i~~~p~~~~~-----~~~~~l~~~~~~~r~~~~~-~~ 181 (337)
++++++. +++|||+++++++...++.|. ..+++++...|+++++ .+++++.++ +++|..++. ++
T Consensus 85 ~~~~~~~-------~~~~iR~~v~~g~~~~~~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~-~~~r~~~~~~~~ 156 (308)
T 2eiy_A 85 VVRRNGY-------RSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITS-SWARFPANVMPG 156 (308)
T ss_dssp HHHHTTC-------SSEEEEEEEECCSSCCSSCCGGGCSCEEEEEEEEC--------CCSCEEEEEC-SSCBCCTTTSCT
T ss_pred HHHhCCC-------CcEEEEEEEEecCCccCcCCCCCCCeEEEEEEEEcCccCCcccccCCeEEEEe-cceecCCCCcCc
Confidence 9998863 478999999866555666554 4678888888987643 268999886 466777664 58
Q ss_pred CCccccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECCEEEeCCCCCCCCCChHHHHHHHHHHHcCC
Q 047617 182 GVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGY 261 (337)
Q Consensus 182 ~~Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~~l~TP~l~~giL~GitR~~vl~~a~~~Gi 261 (337)
++|+++||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||+++ +|+||||+.||++|+++|+
T Consensus 157 ~~Kt~~ny~~~~la~~~A~~~G~de~l~ld~--~G~V~Egs~sNif~v~~g~l~TP~~~~-iL~GitR~~ll~~a~~~g~ 233 (308)
T 2eiy_A 157 KAKVGGNYVNSALAKMEAVAAGADEALLLDE--EGYVAEGSGENLFFVRDGVIYALEHSV-NLEGITRDSVIRIAKDLGY 233 (308)
T ss_dssp TSCBGGGHHHHHHHHHHHHHTTCSEEEEEBT--TSSEEEESSCEEEEEETTEEEEECCTT-SCCCHHHHHHHHHHHHTTC
T ss_pred ceehhhhHHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCceEEEEEECCEEEeCCcCC-CCchHHHHHHHHHHHHCCC
Confidence 9999866999999999999999999999997 799999999999999999999999988 9999999999999999999
Q ss_pred cEEEEecCHHHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHHHHHHHHHHHhhHccCCCCCCCCeEECC
Q 047617 262 QVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTVELD 337 (337)
Q Consensus 262 ~v~e~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~~~~L~~~~~~~~~~~~~~~~~w~~~~~ 337 (337)
+|+|+.++++||.+|||+|+|||++||+||++|+ ++.++ ++++||++++|+++|.+++.|+.+++++|+++|.
T Consensus 234 ~v~E~~i~~~dL~~adevfltns~~gv~pV~~id--~~~~~-~g~~g~~~~~l~~~~~~~~~~~~~~~~~w~~~v~ 306 (308)
T 2eiy_A 234 EVQVVRATRDQLYMADEVFMTGTAAEVTPVSMID--WRPIG-KGTAGPVALRLREVYLEAVTGRRPEYEGWLTYVN 306 (308)
T ss_dssp CEEEECCCHHHHHTCSEEEEEETTTEEEEEEEET--TEECT-TSSCCHHHHHHHHHHHHHHTTCCGGGGGGEEECC
T ss_pred eEEEEeCCHHHHhhCCEEEEccCcceEEEEEEEc--CEECC-CCCCCHHHHHHHHHHHHHHcCCCCCccCCCeeCC
Confidence 9999999999999999999999999999999994 77763 5678999999999999999999999999999984
No 9
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=100.00 E-value=5.6e-64 Score=472.69 Aligned_cols=292 Identities=29% Similarity=0.534 Sum_probs=262.9
Q ss_pred CCeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCC-eeeecChhhHHHHHHHHHHhcCCCCC-CHHHHHHHHH
Q 047617 31 GQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNE-RILLFRPEENAMRMQMGAERMCMSSP-TIEQFVNAVK 108 (337)
Q Consensus 31 ~~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G-~~~~f~l~~Hl~RL~~Sa~~l~i~~~-~~~~l~~~i~ 108 (337)
+.+|+||+++|.+++.|++.|+|++||||+|||||+|++.+| + +|++++|++||.+||+.|+|+.| +.+++.+.+.
T Consensus 7 ~~~~~ng~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~ 84 (309)
T 1iye_A 7 DYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPV--VFRHREHMQRLHDSAKIYRFPVSQSIDELMEACR 84 (309)
T ss_dssp SEEEETTEEEEGGGCCCCTTCHHHHHCCEEECCEEEECCTTSSE--EETHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHH
T ss_pred CeEEECCEEEEhHHcccCccchHHhccceeEEEEEEEECCCCcE--EcCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 468999999999999999999999999999999999976678 5 68899999999999999999976 8999999999
Q ss_pred HHHHHcCCCCCCCCcceEEEEEEEEecCCCCCcCCC--CCcEEEEEEeecCCccC-----CceEEEEEeeceecCCCC-C
Q 047617 109 QIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPA--SEYTFVTYASPVGNYHK-----GALNLVVEEKFRRATPGG-T 180 (337)
Q Consensus 109 ~ll~~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~--~~~~~~i~~~p~~~~~~-----~~~~l~~~~~~~r~~~~~-~ 180 (337)
+++++|+. +++|||++++++....++.|+ ..+++++...|+++++. +++++.++ ++.|..++. +
T Consensus 85 ~~~~~~~~-------~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~-~~~r~~~~~~~ 156 (309)
T 1iye_A 85 DVIRKNNL-------TSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVS-SWNRAAPNTIP 156 (309)
T ss_dssp HHHHHTTC-------SSEEEEEEEEECSSCSSSSCCTTCCEEEEEEEECCCCTTCTTHHHHCEEEEEC-SSCCCCTTTSC
T ss_pred HHHHhcCC-------CCEEEEEEEEeCCCccCCCCCCCCCcEEEEEEEEcCccCCcccccCCeEEEEe-eeeccCCCCCC
Confidence 99998863 578999998866555666644 36788888899876542 58999886 467877765 4
Q ss_pred CCCccccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECCEEEeCCCCCCCCCChHHHHHHHHHHHcC
Q 047617 181 GGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLG 260 (337)
Q Consensus 181 ~~~Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~~l~TP~l~~giL~GitR~~vl~~a~~~G 260 (337)
+++|++.||+++++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||+++++|+||||+.||++|+++|
T Consensus 157 ~~~K~~~ny~~~~la~~~A~~~G~de~l~ld~--~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~g 234 (309)
T 1iye_A 157 TAAKAGGNYLSSLLVGSEARRHGYQEGIALDV--NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELG 234 (309)
T ss_dssp TTSCBGGGHHHHHHHHHHHHHTTCSEEEEECT--TSBEEEETTBEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTT
T ss_pred ccccchhhhHHHHHHHHHHHHcCCCEEEEECC--CCcEEEcCceEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHcC
Confidence 89998669999999999999999999999997 7999999999999999999999999999999999999999999999
Q ss_pred CcEEEEecCHHHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHHHHHHHHHHHhhHccCCCCCCCCeEECC
Q 047617 261 YQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTVELD 337 (337)
Q Consensus 261 i~v~e~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~~~~L~~~~~~~~~~~~~~~~~w~~~~~ 337 (337)
++|+|+.++++||.+|||+|+|||++||+||++|+ ++.++ ++++||++++|+++|.+++.|+.+++++|+++|.
T Consensus 235 ~~v~E~~i~~~eL~~adevfltns~~gv~PV~~id--~~~~~-~g~~g~~~~~l~~~~~~~~~g~~~~~~~w~~~v~ 308 (309)
T 1iye_A 235 IEVREQVLSRESLYLADEVFMSGTAAEITPVRSVD--GIQVG-EGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN 308 (309)
T ss_dssp CCEEECCCBTTHHHHCSEEEEEETTTEEEEEEEET--TEECT-TSSCCHHHHHHHHHHHGGGTTSSCCCSCCEEECC
T ss_pred CeEEEEeCCHHHHhhCcEEEEccCCCEEEEEEEEC--CEECC-CCCCCHHHHHHHHHHHHHHcCCCCccCCCCeECC
Confidence 99999999999999999999999999999999994 77763 5679999999999999999999999999999984
No 10
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=100.00 E-value=6e-60 Score=438.41 Aligned_cols=266 Identities=24% Similarity=0.337 Sum_probs=233.6
Q ss_pred CeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHHHHHHHHHHhcCCCCC-CHHHHHHHHHHH
Q 047617 32 QKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSP-TIEQFVNAVKQI 110 (337)
Q Consensus 32 ~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~~Sa~~l~i~~~-~~~~l~~~i~~l 110 (337)
.+|+||+++|.+++.|++.||||+||||+|||||+| +|+ +|++++|++||.+||++|+|+.| +.++|.+++.++
T Consensus 2 ~~~~nG~~~~~~~~~i~~~d~g~~yGdgvFEtir~~---~g~--~f~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~l 76 (277)
T 3daa_A 2 YTLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVY---NGE--MFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHEL 76 (277)
T ss_dssp EEEETTEEEEGGGCCBCTTBHHHHTCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHH
T ss_pred EEEECCEEeEhHHCeechhhhHHhcccEEEEEEEEE---CCE--EcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 589999999999999999999999999999999998 676 68999999999999999999977 899999999999
Q ss_pred HHHcCCCCCCCCcceEEEEEEEE-ecCCCCCcC-C--CCCcEEEEEEeecCCcc---CCceEEEEEeeceecCCCCCCCC
Q 047617 111 VHSNRRWVPPPGKGTMYIRPLLM-GNGPDLGVA-P--ASEYTFVTYASPVGNYH---KGALNLVVEEKFRRATPGGTGGV 183 (337)
Q Consensus 111 l~~~~~~~p~~~~~~~~iR~~~~-g~~~~~~~~-~--~~~~~~~i~~~p~~~~~---~~~~~l~~~~~~~r~~~~~~~~~ 183 (337)
+++|+. .+.+||+.++ |.++ .+.. | ..++++++++.|++.+. .+|+++.++++. | ..++++
T Consensus 77 i~~n~~-------~~~~lri~vtrG~~~-r~~~~p~~~~~~~~~i~~~p~~~~~~~~~~gv~~~~~~~~-r---~~~~~~ 144 (277)
T 3daa_A 77 VEKNEL-------NTGHIYFQVTRGTSP-RAHQFPENTVKPVIIGYTKENPRPLENLEKGVKATFVEDI-R---WLRCDI 144 (277)
T ss_dssp HHHHTC-------CSEEEEEEEESCBCS-CCSSCCSSCCCCEEEEEEEECCCCHHHHHHCEEEEEEECC-C---CSCTTS
T ss_pred HHhcCC-------CcEEEEEEEEecCCC-cCCCCCCCCCCcEEEEEEEECCCChHHHhCCeEEEEecCc-c---ccCCCc
Confidence 999874 2445665554 4443 3332 2 34678999999987542 268999887542 2 135799
Q ss_pred ccccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECCEEEeCCCCCCCCCChHHHHHHHHHHHcCCcE
Q 047617 184 KAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQV 263 (337)
Q Consensus 184 Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~~l~TP~l~~giL~GitR~~vl~~a~~~Gi~v 263 (337)
|++ ||+++++|+++|+++|+||+||+| +|+|+|++++|||+++||+|+|||+++++|+||||+.++++|+++|++|
T Consensus 145 Kt~-nyl~~~la~~eA~~~g~~e~l~l~---~g~v~E~~~sNif~~~~~~l~TP~~~~~iL~GitR~~vl~~~~~~g~~v 220 (277)
T 3daa_A 145 KSL-NLLGAVLAKQEAHEKGCYEAILHR---NNTVTEGSSSNVFGIKDGILYTHPANNMILKGITRDVVIACANEINMPV 220 (277)
T ss_dssp CBS-CCHHHHHHHHHHHHTTCSEEEEEE---TTEEEEETTBEEEEEETTEEEECCSSTTSCCCHHHHHHHHHHHHTTCCE
T ss_pred chh-hhHHHHHHHHHHHHCCCCEEEEEc---CCEEEEcCceEEEEEECCEEECCCCcCCCCccHHHHHHHHHHHHcCCeE
Confidence 996 999999999999999999999996 5999999999999999999999999999999999999999999999999
Q ss_pred EEEecCHHHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHHHHHHHHHHHhh
Q 047617 264 EERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGI 321 (337)
Q Consensus 264 ~e~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~~~~L~~~~~~~ 321 (337)
+|+.++++||.+|||+|+|||++||+||++|+ ++.++ ++++||+|++|+++|.+.
T Consensus 221 ~e~~i~~~el~~adevf~~ns~~~i~pV~~id--~~~~~-~g~~g~~t~~L~~~~~~~ 275 (277)
T 3daa_A 221 KEIPFTTHEALKMDELFVTSTTSEITPVIEID--GKLIR-DGKVGEWTRKLQKQFETK 275 (277)
T ss_dssp ECCCCBHHHHHTCSEEEEEETTTEEEEEEEET--TEEST-TSSCCHHHHHHHHHHHTT
T ss_pred EEEeCCHHHHHhcCeeeeecChhhEEEEEEEC--CEECC-CCCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999994 88763 567999999999999874
No 11
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=100.00 E-value=1.5e-57 Score=420.94 Aligned_cols=260 Identities=18% Similarity=0.212 Sum_probs=231.1
Q ss_pred eeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Q 047617 33 KFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVH 112 (337)
Q Consensus 33 ~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~~Sa~~l~i~~~~~~~l~~~i~~ll~ 112 (337)
+|+||+ .++.|++.|+|++||||+|||||++ +|+ +|++++|++||.+||+.|+++.|+.+++.+.+.++++
T Consensus 2 ~~~nG~----~~~~i~~~d~g~~yG~gvfEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~~~ 72 (269)
T 1i2k_A 2 FLINGH----KQESLAVSDRATQFGDGCFTTARVI---DGK--VSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAA 72 (269)
T ss_dssp EEETTE----EESCCCTTCHHHHHCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEECCC----cCCccCccccccccceeEEEEEEEE---CCE--EecHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 699999 3578999999999999999999998 776 6889999999999999999998788999999999998
Q ss_pred HcCCCCCCCCcceEEEEEEEEecCCCCCcCCC--CCcEEEEEEeecCCcc----CCceEEEEEeeceecCCCCCCCCccc
Q 047617 113 SNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPA--SEYTFVTYASPVGNYH----KGALNLVVEEKFRRATPGGTGGVKAI 186 (337)
Q Consensus 113 ~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~--~~~~~~i~~~p~~~~~----~~~~~l~~~~~~~r~~~~~~~~~Kt~ 186 (337)
.+. ++|||+.+.++....++.|+ .++++++.+.|+++++ .+++++.++ +.+|..++.++++|++
T Consensus 73 ~~~---------~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~g~~l~~~-~~~~~~~~~~~~~Kt~ 142 (269)
T 1i2k_A 73 EQQ---------NGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALS-PVRLGRNPHLAGIKHL 142 (269)
T ss_dssp HHC---------SEEEEEEEECCSCCSTTCCTTCCCCEEEEEEECCCSHHHHHHHHCEEEEEC-SCCBCCCTTTTBCCBS
T ss_pred hCC---------CeEEEEEEEcCCCCCCCCCccCCCcEEEEEEEECCCcchhhhcCCeEEEEe-ceecCCCCcccCcchh
Confidence 642 46899888765445566554 4678999999998643 268999886 4667666678999996
Q ss_pred cchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECCEEEeCCCCCCCCCChHHHHHHHHHHHcCCcEEEE
Q 047617 187 TNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEER 266 (337)
Q Consensus 187 ~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~~l~TP~l~~giL~GitR~~vl~~a~~~Gi~v~e~ 266 (337)
||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||+++++|+||||+.|+++|+++|++|+|+
T Consensus 143 -n~~~~~~a~~~A~~~G~de~l~ld~--~G~v~E~s~sNif~v~~g~l~TP~~~~~iL~GitR~~ll~~a~~~g~~v~e~ 219 (269)
T 1i2k_A 143 -NRLEQVLIRSHLEQTNADEALVLDS--EGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEV 219 (269)
T ss_dssp -CCHHHHHHHHHHTTSSCSEEEEEBT--TSBEEECSSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHSSSEEEEE
T ss_pred -hhHHHHHHHHHHHHCCCCEEEEECC--CCcEEEcCceEEEEEECCEEECCCCccCccCCHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 7999999999999999999999999999999999999999999999999999
Q ss_pred ecCHHHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHHHHHHHHHHHh
Q 047617 267 AILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTG 320 (337)
Q Consensus 267 ~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~~~~L~~~~~~ 320 (337)
.++++||.+|||+|+|||++||+||++|+ ++.++ .||++++|+++|..
T Consensus 220 ~i~~~eL~~adevfltns~~gv~pV~~id--~~~~~----~g~~~~~l~~~~~~ 267 (269)
T 1i2k_A 220 QASLEESLQADEMVICNALMPVMPVCACG--DVSFS----SATLYEYLAPLCER 267 (269)
T ss_dssp CCBHHHHHTCSEEEEECSSSCEEEEEEET--TEECC----CCHHHHHHHHHHHT
T ss_pred ECCHHHHhhCCEEEEcCChhheEEEEEEC--CEEec----CcHHHHHHHHHHhc
Confidence 99999999999999999999999999994 77752 48999999999874
No 12
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=100.00 E-value=2.2e-57 Score=420.20 Aligned_cols=262 Identities=19% Similarity=0.241 Sum_probs=228.4
Q ss_pred CeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHHHHHHHHHHhcCCCCC-CHHHHHHHHHHH
Q 047617 32 QKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSP-TIEQFVNAVKQI 110 (337)
Q Consensus 32 ~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~~Sa~~l~i~~~-~~~~l~~~i~~l 110 (337)
.+|+|| .+++.|++.|+|++||||+|||||+| +|+ +|++++|++||.+||+.|+|+.| +.+++.+.+.++
T Consensus 5 ~~~~nG----~~~a~i~~~d~g~~yG~gvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l 75 (272)
T 3lul_A 5 RVIEDK----GDMTPSFGIDDRIFLGEGLFETIRVN---SSK--PSFAYMHWERLGNSARQLGIPFEISFDDWFEHLIQK 75 (272)
T ss_dssp EECCCC----C--CCCCCTTBGGGGTCEEEEEEEEE---TTE--ESSHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHH
T ss_pred EEEECC----ccccccCCccchhhcceEeEEEEEEE---CCE--eCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 589999 78899999999999999999999998 676 68899999999999999999998 999999999999
Q ss_pred HHHcCCCCCCCCcceEEEEEEEEecCCCCCcCCCC--CcEEEEEEeecCCccCCceEEEEEeeceecCCCCCCCCccccc
Q 047617 111 VHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPAS--EYTFVTYASPVGNYHKGALNLVVEEKFRRATPGGTGGVKAITN 188 (337)
Q Consensus 111 l~~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~~--~~~~~i~~~p~~~~~~~~~~l~~~~~~~r~~~~~~~~~Kt~~~ 188 (337)
+++|+. .+++||+.++++....++.++. .++++++ .|+++.. .++++.++ +++|..++.++++|++ |
T Consensus 76 ~~~~~~-------~~~~irl~v~rg~~~~g~~~~~~~~~~~~~~-~p~~~~~-~~v~l~~~-~~~r~~~~~~~~~Kt~-n 144 (272)
T 3lul_A 76 IQKDNL-------YHGGIKAILSGGPASRGLAERGQVSQLIFQT-FNYSIQK-HPVRLISI-NWLRDKANPLYQLKSV-N 144 (272)
T ss_dssp HHHTTC-------SSEEEEEEEECCBCCSSTTCCCSSEEEEEEE-ECCCCCC-SCEEEEEE-EEEECTTCGGGGSCBS-C
T ss_pred HHhcCC-------CCEEEEEEEEecCCccCcCCCCCCCcEEEEE-ECCCCcc-ccEEEEEE-eEEecCCCcccchhhh-c
Confidence 998863 4678998887554456665543 3566665 6654322 45888776 5788877788999996 9
Q ss_pred hhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECCEEEeCCCCCCCCCChHHHHHHHHHHHcCCcEEEEec
Q 047617 189 YAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEERAI 268 (337)
Q Consensus 189 y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~~l~TP~l~~giL~GitR~~vl~~a~~~Gi~v~e~~i 268 (337)
|+++++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||+++++|+||||+.++++|+++|++|+|+.+
T Consensus 145 yl~~~la~~~A~~~G~de~L~ld~--~g~v~E~~~sNif~~~~g~l~TP~l~~~iL~GitR~~ll~la~~~g~~v~e~~i 222 (272)
T 3lul_A 145 YLEAIIAQRQAIAVGADDALFFNT--ENHVTETTCANLFLIENNILYTPRVEDGILPGITRARLISHCQQHKMSVQEISL 222 (272)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEEET--TSBEEEESSCEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECCC
T ss_pred cHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCCeEEEEEECCEEECCCCccCcCcCHHHHHHHHHHHHcCCeEEEEEC
Confidence 999999999999999999999997 799999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHHHHHHHHHHHhhHcc
Q 047617 269 LVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQSG 324 (337)
Q Consensus 269 ~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~~~~L~~~~~~~~~~ 324 (337)
+++||.+|||+|+|||++||+||++|+ ++.++ . +++|+++|.+..+.
T Consensus 223 ~~~el~~adevf~~ns~~~v~PV~~id--~~~~~----~---t~~l~~~y~~~~~~ 269 (272)
T 3lul_A 223 TKKRIEDADAVFLTNSLQGIRRVLSLD--NIIFE----V---NHPIIDKLIFLLNQ 269 (272)
T ss_dssp BHHHHHTCSEEEEEETTTEEEEEEEET--TEECC----C---CCHHHHHHHHHHHH
T ss_pred CHHHHhhCCEEEEEcCchhEEEEEEEC--CEEcc----h---HHHHHHHHHHHHhh
Confidence 999999999999999999999999994 78752 1 88999999886554
No 13
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=100.00 E-value=2.7e-57 Score=423.73 Aligned_cols=262 Identities=21% Similarity=0.254 Sum_probs=231.8
Q ss_pred CeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 047617 32 QKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIV 111 (337)
Q Consensus 32 ~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~~Sa~~l~i~~~~~~~l~~~i~~ll 111 (337)
.+|+||+++ +.|++.|+|++||||+|||||++ +|+ +|++++|++||.+||+.|+++.| .+++.+.+.+++
T Consensus 23 ~~~~nG~~~----~~i~~~d~g~~yGdgvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~-~~~l~~~i~~~v 92 (292)
T 2xpf_A 23 LDWVDGRPA----AELSVRDRGLAYGDGLFETLAVR---AGT--PRLLERHLARLEEGCRRLAIPLD-TAALRQELLAFC 92 (292)
T ss_dssp CEEETTEEC----SEEETTBHHHHHCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHH
T ss_pred EEEECCEEE----EEEcccchhhhcCcEeEEEEEEE---CCE--ECCHHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHH
Confidence 589999998 78999999999999999999997 787 67899999999999999999987 888999999999
Q ss_pred HHcCCCCCCCCcceEEEEEEEEecCCCCCcCCC--CCcEEEEEEeecCCcc----CCceEEEEEeeceecCCCCCCCCcc
Q 047617 112 HSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPA--SEYTFVTYASPVGNYH----KGALNLVVEEKFRRATPGGTGGVKA 185 (337)
Q Consensus 112 ~~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~--~~~~~~i~~~p~~~~~----~~~~~l~~~~~~~r~~~~~~~~~Kt 185 (337)
+... +.|||+.+..+....++.|+ .++++++.+.|+++++ .+++++.+++ .+|..+..++++|+
T Consensus 93 ~~~~---------~~~iR~~v~rg~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~-~~~~~~~~~~~~Kt 162 (292)
T 2xpf_A 93 AALG---------DGVAKLIVTRGEGLRGYAPPAEASPRRILSGSPRPAYPERHWQQGVRLFACR-TRLAEQPLLAGLKH 162 (292)
T ss_dssp HHHC---------SEEEEEEEECCBCCSSSSCCTTCCCEEEEEEECCCCCCHHHHHTCEEEEECC-CCBCCCTTTTBCCB
T ss_pred HhCC---------CcEEEEEEEecCCCCCCCCCCCCCcEEEEEEEECCccchhhccCCeEEEEee-eeccCCCCCCCcch
Confidence 8742 45899888744335666554 3678899999998654 3789998875 45555556789999
Q ss_pred ccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECCEEEeCCCCCCCCCChHHHHHHHHHHHcCCcEEE
Q 047617 186 ITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEE 265 (337)
Q Consensus 186 ~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~~l~TP~l~~giL~GitR~~vl~~a~~~Gi~v~e 265 (337)
+ ||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||++.++|+||||+.||++|+++|++|+|
T Consensus 163 ~-ny~~~~la~~~A~~~G~de~L~ld~--~G~V~Egs~sNif~v~~g~l~TPpl~~~iL~GitR~~vl~~a~~~G~~v~E 239 (292)
T 2xpf_A 163 L-NRLEQVLARAEWSDAGHAEGLMLDV--HERVVEGVFSNLLLVLDGTLVAPDLRRCGVAGVMRAELLERAEGIGVPLAI 239 (292)
T ss_dssp S-CCHHHHHHHTTCCCTTCSEEEEEBT--TCCEEEESSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHTTCCEEE
T ss_pred h-hhHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCCeEEEEEECCEEEeCCCCCccCCCHHHHHHHHHHHHcCCeEEE
Confidence 6 9999999999999999999999997 799999999999999999999999999999999999999999999999999
Q ss_pred EecCHHHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHHHHHHHHHHHhhH
Q 047617 266 RAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQ 322 (337)
Q Consensus 266 ~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~~~~L~~~~~~~~ 322 (337)
+.++++||.+|||+|+|||++||+||++|+ ++.+ .+||++++|+++|.+.+
T Consensus 240 ~~i~~~eL~~adevfltns~~gv~PV~~id--~~~~----~~g~~t~~l~~~~~~~~ 290 (292)
T 2xpf_A 240 RDVSMAELATADEVFLCNSQFGIWPVRALD--EHVW----PVGELTRKLQDQLRDDL 290 (292)
T ss_dssp ECBCHHHHHTCSEEEEEETTTEEEEEEEET--TEEC----CCCHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHhCCEEEEEcCcccEEEEEEEC--CEEe----CCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999994 7765 27899999999998744
No 14
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.4e-57 Score=425.02 Aligned_cols=267 Identities=21% Similarity=0.302 Sum_probs=201.6
Q ss_pred CeeeC---Cee--eeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHHHHHHHHHHhcCCCCCCHHHHHHH
Q 047617 32 QKFSQ---GTL--TRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNA 106 (337)
Q Consensus 32 ~~~~n---g~~--~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~~Sa~~l~i~~~~~~~l~~~ 106 (337)
.+|+| |++ +|.+++.|+++||||+||||+|||||+| +|+ +|++++|++||.+||+.|+|+.|+.+++.++
T Consensus 16 ~v~~n~~~G~~~~~~~~~a~i~~~Drg~~yGdgvFEtirv~---~G~--~~~l~~Hl~RL~~Sa~~L~i~~p~~~~l~~~ 90 (315)
T 3sno_A 16 ILIVEPYGGSIRQQNPNLPMVFWDDAALTRGDGIFETLLIR---DGH--ACNVRRHGERFKASAALLGLPEPILEDWEKA 90 (315)
T ss_dssp EEEECSTTCCEEEECTTSCCCCTTBTTTTTCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHHTCCCCCHHHHHHH
T ss_pred EEEEECCCCeEEEeeHHHCcccccchHhhcCCEeEEEEEEE---CCE--ECCHHHHHHHHHHHHHHhCCCCcCHHHHHHH
Confidence 68999 999 9999999999999999999999999998 677 6889999999999999999998888999999
Q ss_pred HHHHHHHcCCCCCCCCcceEEEEEEEEecCCCCCcCCCCCcEEEEEEeecCCcc----CCceEEEEEeec----------
Q 047617 107 VKQIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYH----KGALNLVVEEKF---------- 172 (337)
Q Consensus 107 i~~ll~~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~----~~~~~l~~~~~~---------- 172 (337)
+.++++++.. ..+.+++|||++++++....+ .+++++++.|++.++ .+|+++.+++..
T Consensus 91 i~~~v~~~~~---~n~~~~~~iRl~vtrG~~~~g-----~p~~~v~~~p~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ 162 (315)
T 3sno_A 91 TQMGIESWYS---HPNAGEASCTWTLSRGRSSTG-----LASGWLTITPVSSDKLAQREHGVSVMTSSRGYSIDTGLPGI 162 (315)
T ss_dssp HHHHHHHHHT---C--CCCEEEEEEEECCBTTTC-----CCEEEEEEEECCHHHHHHHHHCEEEEEEEC-----------
T ss_pred HHHHHHhhcc---cCCCCCEEEEEEEEeCCCCCC-----CCEEEEEEEECCCcchhhhcCCEEEEEeccccccccccccc
Confidence 9999997310 001257899999875433232 357888889987543 268998876421
Q ss_pred ------------eecCCCCCCCCccccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECCEEEeCCCC
Q 047617 173 ------------RRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTN 240 (337)
Q Consensus 173 ------------~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~~l~TP~l~ 240 (337)
.+..|..++++||+ ||+++++|+++|+++|+||+||+|. +| |+|++++|||+++||+|+|||++
T Consensus 163 ~~~~r~~~s~~~~~~~p~~l~~~Kt~-nyl~~vla~~~A~~~G~de~l~l~~--~G-v~E~s~sN~f~~~~g~l~TPp~~ 238 (315)
T 3sno_A 163 GKATRGELSKVERTPAPWLTVGAKTL-AYAANMAALRYAKSNGFDDVIFTDG--DR-VLEGATSTVVSFKGDKIRTPSPG 238 (315)
T ss_dssp -------------------------------------------CEEEEEEET--TE-EEEESSSEEEEEETTEEEEECCC
T ss_pred cccccccccccccccCcccccCcchh-ccHHHHHHHHHHHHcCCCEEEEEeC--CC-cEEcCCeeEEEEECCEEEcCCCC
Confidence 01223236899997 9999999999999999999999997 79 99999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHcCCcEEEEecCHHHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHHHHHHHHHHHh
Q 047617 241 GTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTG 320 (337)
Q Consensus 241 ~giL~GitR~~vl~~a~~~Gi~v~e~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~~~~L~~~~~~ 320 (337)
.++|+||||+.++++|+++|++|+|+.++++||.+|||+|+|||++||+||++|+ ++.+ ..++++++|+++|.+
T Consensus 239 ~~iL~GitR~~ll~~a~~~g~~v~e~~i~~~eL~~adevfl~ns~~gv~pV~~id--~~~~----~~~~~~~~l~~~~~~ 312 (315)
T 3sno_A 239 GDILPGTTQAALFAHATEKGWRCKEKDLSIDDLFGADSVWLVSSVRGPVRVTRLD--GHKL----RKPDNEKEIKALITK 312 (315)
T ss_dssp ------HHHHHHHHHHHHTTCEEEEECCBHHHHHHSSEEEEEETTTEEEEEEEES--SSCC----CCCTTHHHHHHHHHH
T ss_pred CCcChhHHHHHHHHHHHHcCCEEEEEECCHHHHHhCCeeEEEcCcccEEEEEEEC--CEEC----CCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999994 7775 378999999999987
Q ss_pred h
Q 047617 321 I 321 (337)
Q Consensus 321 ~ 321 (337)
.
T Consensus 313 ~ 313 (315)
T 3sno_A 313 A 313 (315)
T ss_dssp H
T ss_pred h
Confidence 4
No 15
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=100.00 E-value=2.5e-55 Score=409.00 Aligned_cols=264 Identities=23% Similarity=0.283 Sum_probs=233.0
Q ss_pred eeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHH
Q 047617 34 FSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSP-TIEQFVNAVKQIVH 112 (337)
Q Consensus 34 ~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~~Sa~~l~i~~~-~~~~l~~~i~~ll~ 112 (337)
|.+|++++..++.|++.|+|+ |||+|||||++ +|+ +|++++|++||.+||+.|+++.| +.+++.+.+.++++
T Consensus 18 ~~~~~~~~~~~~~i~~~d~g~--G~gvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~l~~~i~~~~~ 90 (285)
T 3csw_A 18 RGKFRRADEISLDFSLFEKSL--QGAVYETLRTY---SRA--PFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGAD 90 (285)
T ss_dssp TTEEEESSEEEEEHHHHHHHT--TCCEEEEEEEE---TTE--ETTHHHHHHHHHHHHHTTTCCCSSCHHHHHHHHHHHHT
T ss_pred ccCceEcccccCEeCCccccc--ceeeEEEEEEE---CCE--ECCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 899999999999999999999 99999999998 676 68899999999999999999977 89999999999998
Q ss_pred HcCCCCCCCCcceEEEEEEEEecCCCCCcCCCCCcEEEEEEeecCCcc-CCceEEEEEeeceecCCC-CCCCCccccchh
Q 047617 113 SNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYH-KGALNLVVEEKFRRATPG-GTGGVKAITNYA 190 (337)
Q Consensus 113 ~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~-~~~~~l~~~~~~~r~~~~-~~~~~Kt~~~y~ 190 (337)
.++ +++|||+++...+ .++++.+.|+++++ .+++++.++ ++++..+. .++++|++ +|+
T Consensus 91 ~~~--------~~~~iR~~v~~~~----------~~~~i~~~p~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~Kt~-~~l 150 (285)
T 3csw_A 91 EFK--------QEVRIKVYLFPDS----------GEVLFVFSPLNIPDLETGVEVKIS-NVRRIPDLSTPPALKIT-GRT 150 (285)
T ss_dssp TCS--------SCEEEEEEECTTT----------CCEEEEEEECCCCCCTTCEEEEEC-SSCCCCTTTSCTTCCBT-TCH
T ss_pred hhC--------CCeEEEEEEEcCC----------CEEEEEEEeCCCccccCCeEEEEE-eEEecCCCCCCCccchh-ccH
Confidence 763 3579998873111 15778889987654 478999876 35553333 34799997 699
Q ss_pred hhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECCEEEeCCCCCCCCCChHHHHHHHHHHHcCCcEEEEecCH
Q 047617 191 IIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEERAILV 270 (337)
Q Consensus 191 ~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~~l~TP~l~~giL~GitR~~vl~~a~~~Gi~v~e~~i~~ 270 (337)
++++++++|++ +||+||+|. +|+|+|++++|||+++||+|+|||++.++|+||||+.++++|+++|++|+|+.+++
T Consensus 151 ~~~la~~~A~~--~de~L~ld~--~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~g~~v~E~~i~~ 226 (285)
T 3csw_A 151 DIVLARREIVD--CYDVILLGL--NGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWV 226 (285)
T ss_dssp HHHHHHTTCSS--SSEEEEECT--TSBEEEESSSEEEEEETTEEEEECGGGTCCCCHHHHHHHHHHHHTTCCEEEECCBH
T ss_pred HHHHHHHHHHh--CCeEEEECC--CCcEEEcCceEEEEEECCEEEeCCCCCCccCCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 99999988877 999999997 79999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHHHHHHHHHHHhhHccCCCCCCCCeE
Q 047617 271 EELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTV 334 (337)
Q Consensus 271 ~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~~~~L~~~~~~~~~~~~~~~~~w~~ 334 (337)
+||.+|||+|+|||++||+||++|+ ++.++ +|++||++++|+++|.++++|+. .+|+.
T Consensus 227 ~dL~~adevfltns~~gv~PV~~id--~~~~~-~g~~g~~t~~L~~~~~~~~~~~~---~~w~~ 284 (285)
T 3csw_A 227 WELFEADEMFLTHTSAGVVPVRRLN--EHSFF-EEEPGPVTATLMENFEPFVLNLE---ENWVG 284 (285)
T ss_dssp HHHHTCSEEEEEETTTEEEEEEEET--TEESC-SSSCCHHHHHHHHHHHHHHHTCG---GGTTT
T ss_pred HHHhhCCEEEEecCcceEEEEEEEC--CEECC-CCCCCHHHHHHHHHHHHHHhCcC---CCCCC
Confidence 9999999999999999999999994 88763 56799999999999999999977 68874
No 16
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-49 Score=363.53 Aligned_cols=222 Identities=23% Similarity=0.273 Sum_probs=193.3
Q ss_pred eeeCCeeeeCCCcccCcCCccccc-cceeeeeeEEEeecCCeeeecChhhHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 047617 33 KFSQGTLTRFGKTEMNPSSGILNY-GQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIV 111 (337)
Q Consensus 33 ~~~ng~~~~~~~~~i~~~d~~l~y-G~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~~Sa~~l~i~~~~~~~l~~~i~~ll 111 (337)
+|+||+.. +++.|+|++| |||+|||||++ +|+ +|++++|++||.+||+.|+++.|..+++.+.+.+++
T Consensus 2 ~~~nG~~~------~~~~d~g~~y~G~gvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~~~~l~~~i~~~~ 70 (246)
T 2zgi_A 2 RLLNGTPL------ALALPEAFLYHGASVFTTLRAE---GGR--PLWLEEHLARLRRHALALGLSYPGDEAFLEDLEALL 70 (246)
T ss_dssp EEETTEEC------CCSSCHHHHHSCCCEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred EEECCccc------CCCccCcccccCeeEEEEEEEE---CCE--eCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 68999955 3899999999 99999999998 676 688999999999999999999873388999999998
Q ss_pred HHc-CCCCCCCCcceEEEEEEEEecCCCCCcCCCCCcEEEEEEeecCCcc----CCceEEEEEeeceecCCCCCCCCccc
Q 047617 112 HSN-RRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYH----KGALNLVVEEKFRRATPGGTGGVKAI 186 (337)
Q Consensus 112 ~~~-~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~----~~~~~l~~~~~~~r~~~~~~~~~Kt~ 186 (337)
+.| + .+++|||+++++++...+ ..|.+... .+++++.+++ . |..|+ ++++|++
T Consensus 71 ~~~~~-------~~~~~vR~~v~~g~~~~~------------~~p~~~~~~~~~~~g~~l~~~~-~-r~~~~-~~~~Kt~ 128 (246)
T 2zgi_A 71 RAFPK-------APCLRLRFTVGEGVRLSE------------ARPYAPLPLSLYREGVRVRLTG-Y-RVHPD-LARYKTG 128 (246)
T ss_dssp TSCTT-------CSEEEEEEEEETTEEEEE------------EEECCCCCTHHHHHCBCEEEEE-E-ECCTT-TTTSCBS
T ss_pred HhcCC-------CCCEEEEEEEECCCCccC------------cCcCCCCchhHhhcCeEEEEec-c-cCCCC-Cccchhh
Confidence 876 3 257899999875432222 23433221 2589998875 4 77776 8899997
Q ss_pred cchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECCEEEeCCCCCCCCCChHHHHHHHHHHHcCCcEEEE
Q 047617 187 TNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEER 266 (337)
Q Consensus 187 ~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~~l~TP~l~~giL~GitR~~vl~~a~~~Gi~v~e~ 266 (337)
||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|| .++|+||||+.++++|+++|++|+|+
T Consensus 129 -n~~~~~~a~~~A~~~g~de~l~ld~--~G~v~Egs~sNif~v~~g~l~TP---~~iL~GitR~~ll~~a~~~g~~v~E~ 202 (246)
T 2zgi_A 129 -NYLPYRLALEEARKEGAFEGLLLDA--FGHVVDGSRTSPLLFREGTLYLL---EGGLEGITREKVAEAARGLGLRVERG 202 (246)
T ss_dssp -CCHHHHHHHHHHHTTTCSEEEEECT--TSCEEEESSSEEEEEETTEEEEE---CSSCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred -hhHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCCeEEEEEECCEEECC---CCccCcHHHHHHHHHHHHCCCeEEEE
Confidence 8999999999999999999999997 79999999999999999999999 89999999999999999999999999
Q ss_pred ecCHHHHhccceeeeecCccceEEEEEEE
Q 047617 267 AILVEELFDAEEVFCTGTAVVVNPVNSIT 295 (337)
Q Consensus 267 ~i~~~eL~~adevfltnt~~gi~pV~~I~ 295 (337)
.++++||.+ |+|+|||++||+||++|+
T Consensus 203 ~i~~~dL~~--evfltns~~gi~pV~~id 229 (246)
T 2zgi_A 203 LFRPEGLRG--HLLLAGSGVGLLPVRPPP 229 (246)
T ss_dssp CCCGGGCCS--EEEEEETTTEEEEBSSCC
T ss_pred eCCHHHHHh--hHeeecChhheEEEEEEC
Confidence 999999998 999999999999999994
No 17
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=100.00 E-value=1.6e-44 Score=324.24 Aligned_cols=205 Identities=18% Similarity=0.212 Sum_probs=181.2
Q ss_pred ccceeeeeeEEEeecCCeeeecChhhHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCcceEEEEEEEEec
Q 047617 56 YGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRPLLMGN 135 (337)
Q Consensus 56 yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~~Sa~~l~i~~~~~~~l~~~i~~ll~~~~~~~p~~~~~~~~iR~~~~g~ 135 (337)
-|+|+|||||++ .+|+ +|++++|++||.+||+.|+++. +.+++.+.+.++++ ++ .+++|||+++.++
T Consensus 14 ~g~glFEtir~~--~~G~--~~~l~~Hl~RL~~Sa~~l~~~~-~~~~l~~~i~~~~~-~~-------~~~~~iR~~~~~~ 80 (221)
T 3qqm_A 14 ADFELIETMRWQ--PGTS--FLRFDRHLARLYGSAAELGFAC-DPQRIAEVLSDALD-GA-------RTAMRTRLALARN 80 (221)
T ss_dssp SCCEEEEEEEEE--TTTE--ETTHHHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHHT-TC-------CSCEEEEEEEETT
T ss_pred CCCEEEEEEEEe--cCCc--CcCHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHh-cC-------CCCEEEEEEEEcC
Confidence 489999999997 3676 6889999999999999999996 68899999999987 43 3578999988754
Q ss_pred CCCCCcCCCCCcEEEEEEeecCCccC-CceEEEEEeeceecCCCCCCCCccccchhhhHHHHHHHHHCCCCeEEEEecCC
Q 047617 136 GPDLGVAPASEYTFVTYASPVGNYHK-GALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVT 214 (337)
Q Consensus 136 ~~~~~~~~~~~~~~~i~~~p~~~~~~-~~~~l~~~~~~~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~ 214 (337)
+ .+.+...|+++++. +++++.+++ ++|..++.++++|++ ||+.+.+++++|+++|+||+||+|.
T Consensus 81 g-----------~~~i~~~p~~~~~~~~~~~l~~~~-~~~~~~~~~~~~Kt~-nr~~~~~a~~~a~~~g~~e~l~l~~-- 145 (221)
T 3qqm_A 81 G-----------DATASAQPYEPLAADKVWILRLAR-TRLDSQNTLLRHKTS-RRQLYTHARSEYLVTQADEVLLANE-- 145 (221)
T ss_dssp S-----------CEEEEEEECCCCCTTCCEEEEECS-CCBCTTCGGGGSCBS-CCHHHHHHHHTSCTTTCSEEEEEBT--
T ss_pred C-----------CEEEEEEcCCCCCCCCCEEEEEee-eEecCCCcchhchhc-chHHHHHHHHHHHhcCCcEEEEECC--
Confidence 3 26677888876553 689998874 667666678999996 9999999999999999999999997
Q ss_pred CCeEEecCceeEEEEEC-CEEEeCCCCCCCCCChHHHHHHHHHHHcCCcEEEEecCHHHHhccceeeeecCccceEEEEE
Q 047617 215 GKYVEEASTSNIFVVKE-NVISTPPTNGTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNS 293 (337)
Q Consensus 215 ~g~v~E~s~sNvf~v~~-~~l~TP~l~~giL~GitR~~vl~~a~~~Gi~v~e~~i~~~eL~~adevfltnt~~gi~pV~~ 293 (337)
+|+|+|++++|||++++ |+|+|||++.++|+||||+.+++++ +|+|+.++++||.+|||+|+|||++||+||+-
T Consensus 146 ~g~v~E~s~sNif~~~~~~~l~TP~~~~~~L~GitR~~ll~~~-----~v~e~~i~~~~L~~adevf~~ns~~gi~pV~l 220 (221)
T 3qqm_A 146 RGEICEGTITNVFADFGDGVLATPRLDCGLLPGVLRAELLDEG-----RAEEAIYSYDDLKSAKALFVGNSLRGLIPAKL 220 (221)
T ss_dssp TSCEEEESSCEEEEECSSSCEEEECGGGTCCCCHHHHHHHHTT-----SEEEECCCHHHHTTCSEEEEEETTTEEEEEEE
T ss_pred CCeEEEcCceeEEEEeCCCEEECCCCccCcchHHHHHHHHhhC-----cEEEEeCCHHHHHhCCEEEEEecceeEEEEEE
Confidence 79999999999999998 9999999999999999999999953 89999999999999999999999999999974
No 18
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=100.00 E-value=1.1e-40 Score=293.55 Aligned_cols=189 Identities=14% Similarity=0.120 Sum_probs=156.3
Q ss_pred cccceeeeeeEEEeecCCeeeecChhhHHHHHHHHH-HhcCCC--CC-CHHHHHHHHHHHHHHcCCCCCCCCcceEEEEE
Q 047617 55 NYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGA-ERMCMS--SP-TIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRP 130 (337)
Q Consensus 55 ~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~~Sa-~~l~i~--~~-~~~~l~~~i~~ll~~~~~~~p~~~~~~~~iR~ 130 (337)
+||+|+|||||++ +|+ +|++++|++||.+|| +.|+++ .| +.+++.+.+. ++++++ .+++|||+
T Consensus 2 ~~g~~vfEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~~l~~~~~~~~~~~~~~~~i~-~~~~~~-------~~~~~iR~ 68 (194)
T 3ceb_A 2 MWQFPLFETILIE---QGQ--AKNISYHQQRYEKSLLKFYPKMKLQPFDLAKIIAKHT-ALFTHR-------EGLIRCRI 68 (194)
T ss_dssp CTTCCEEEEEEEE---TTE--ECSHHHHHHHHHHHHHHHSTTCCCCCCCHHHHHHTCG-GGGSCS-------SSEEEEEE
T ss_pred CCCCeEEEEEEEE---CCE--ecCHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhhCC-------CCCEEEEE
Confidence 6999999999998 777 688999999999999 999999 55 8899998888 877665 36899998
Q ss_pred EEEecCCCCCcCCCCCcEEEEEEeecCCccCCceEEEEEeeceecCCCCCCCCccccchhhhHHHHHHHHHCCCCeEEEE
Q 047617 131 LLMGNGPDLGVAPASEYTFVTYASPVGNYHKGALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFL 210 (337)
Q Consensus 131 ~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~l~~~~~~~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~Lll 210 (337)
++.++. ..+...|+++ .++ +.. .+...+..++++|++ ||+ ++++.+|+++|+||+||+
T Consensus 69 ~~~~g~------------~~~~~~p~~~---~~~-~~~---~~~~~~~~~~~~Kt~-n~~--~~~~~~A~~~g~de~l~l 126 (194)
T 3ceb_A 69 DYNHHD------------YVLQCFPYQQ---KVY-RTF---KPVFCDHIDYSLKFS-DRT--LLNNLLKQKEECDEIMII 126 (194)
T ss_dssp EECSSC------------EEEEEEEECC---CCC-CCE---EEEECSSCCCSSCBS-CCH--HHHHHHGGGTTSSEEEEE
T ss_pred EEeCCc------------cEEEEecCCC---CcE-EEE---EEecCCCcchhhccc-CHH--HHHHHHHhhCCCCEEEEE
Confidence 876431 1233344432 222 111 122234567899996 887 568889999999999999
Q ss_pred ecCCCCeEEecCceeEEEEECCEEEeCCCCCCCCCChHHHHHHHHHHHcCCcEEEEecCHHHHhccceeeeecCccce
Q 047617 211 DAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVV 288 (337)
Q Consensus 211 n~~~~g~v~E~s~sNvf~v~~~~l~TP~l~~giL~GitR~~vl~~a~~~Gi~v~e~~i~~~eL~~adevfltnt~~gi 288 (337)
. +|+|+|++++|||+++||+|+||| +++|+||||+.+++ +++|+|+.++++||.+|||+|+|||++|+
T Consensus 127 -~--~G~v~E~s~sNif~~~~g~l~TP~--~~~L~GitR~~ll~-----~~~v~e~~i~~~eL~~adevfl~ns~~gi 194 (194)
T 3ceb_A 127 -R--QGKVTDCSIGNLIFRQNNQWITPD--KPLLEGTQRAKLLE-----QKKIIAREIFFEDLAQYEEIRLINAMNGL 194 (194)
T ss_dssp -E--TTEECCCSSSEEEEEETTEEEEES--SCSSCCHHHHHHHH-----TTSSEEECCBGGGGGGCSCEEEEBTTBCC
T ss_pred -e--CCEEEEeccEEEEEEECCEEECCC--CCCcChHHHHHHHc-----CCCEEEecCCHHHHhhccEEEEEecccCC
Confidence 6 799999999999999999999999 79999999999998 57999999999999999999999999986
No 19
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=37.80 E-value=21 Score=26.17 Aligned_cols=62 Identities=11% Similarity=-0.003 Sum_probs=34.2
Q ss_pred HHHHHHHcCCcEEEEecCHHHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHHHHHHHHHHHh
Q 047617 252 IIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTG 320 (337)
Q Consensus 252 vl~~a~~~Gi~v~e~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~~~~L~~~~~~ 320 (337)
+.+++++.|++++|.+|.-+.- ..+++.-.+....-+|+.-|. ||+.+. +.+. ..|.+++.+
T Consensus 20 aK~~L~~~gi~y~~idi~~d~~-~~~~~~~~~~G~~tVP~I~i~-Dg~~l~-~~~~----~el~~~L~e 81 (92)
T 2lqo_A 20 LKTALTANRIAYDEVDIEHNRA-AAEFVGSVNGGNRTVPTVKFA-DGSTLT-NPSA----DEVKAKLVK 81 (92)
T ss_dssp HHHHHHHTTCCCEEEETTTCHH-HHHHHHHHSSSSSCSCEEEET-TSCEEE-SCCH----HHHHHHHHH
T ss_pred HHHHHHhcCCceEEEEcCCCHH-HHHHHHHHcCCCCEeCEEEEe-CCEEEe-CCCH----HHHHHHHHH
Confidence 3456677899999999974322 122222223334457888774 455542 2223 345555554
No 20
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=35.11 E-value=31 Score=26.20 Aligned_cols=80 Identities=16% Similarity=0.201 Sum_probs=46.4
Q ss_pred CCCCCChHHHHHH-HHHHHcCCcEEE---------EecCHHHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHH
Q 047617 241 GTILPGITRKSII-EIARVLGYQVEE---------RAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTV 310 (337)
Q Consensus 241 ~giL~GitR~~vl-~~a~~~Gi~v~e---------~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~ 310 (337)
.|+=...|-...| +.|+++|+.+.. -.++.+|+.+||-+++.+.. .+- -.++ .|+++ +..+....
T Consensus 13 tGiAhTymAaeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~-~v~-~~RF--~GK~v-~~~~v~~a 87 (106)
T 2r4q_A 13 TGIAHTFMAADALKEKAKELGVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADK-QVE-MERF--KGKRV-LQVPVTAG 87 (106)
T ss_dssp CC--CHHHHHHHHHHHHHHHTCCEEEEEEETTEEESCCCHHHHHHCSCEEEEESS-CCC-CGGG--TTSBE-EEECHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCccCCCCHHHHHhCCEEEEEeCC-ccC-HhHc--CCCeE-EEeCHHHH
Confidence 4566666655555 467788987654 25999999999999998874 322 2333 46654 33333333
Q ss_pred HHHHHHHHHhhHccC
Q 047617 311 GQKLYEILTGIQSGC 325 (337)
Q Consensus 311 ~~~L~~~~~~~~~~~ 325 (337)
.+.=.+.+.+...+.
T Consensus 88 i~~p~~~l~~a~~~~ 102 (106)
T 2r4q_A 88 IRRPQELIEKAMNQD 102 (106)
T ss_dssp HHCHHHHHHHHHTTC
T ss_pred HHCHHHHHHHHHhcc
Confidence 333344455555443
No 21
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=32.86 E-value=50 Score=25.26 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=27.1
Q ss_pred HHHHHHHcCCcEEE---------EecCHHHHhccceeeeecCc
Q 047617 252 IIEIARVLGYQVEE---------RAILVEELFDAEEVFCTGTA 285 (337)
Q Consensus 252 vl~~a~~~Gi~v~e---------~~i~~~eL~~adevfltnt~ 285 (337)
+-+.|+++|+.+.. -.++.+|+.+||-+++.+..
T Consensus 28 L~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~ 70 (111)
T 2kyr_A 28 LEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAV 70 (111)
T ss_dssp HHHHHHHTSSEEEEEEEETTEEESCCCHHHHHHCSEEEEEESS
T ss_pred HHHHHHHCCCeEEEEecCCCCcCCCCCHHHHHhCCEEEEEeCC
Confidence 34567889987654 36999999999999998874
No 22
>3mcb_B Transcription factor BTF3; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens}
Probab=26.07 E-value=99 Score=20.70 Aligned_cols=43 Identities=19% Similarity=0.305 Sum_probs=27.4
Q ss_pred CCCCeEEEEecCCCCeEEe--------cCceeEEEEECCEEEeCCCCCCCCCChH
Q 047617 202 KGFTDVLFLDAVTGKYVEE--------ASTSNIFVVKENVISTPPTNGTILPGIT 248 (337)
Q Consensus 202 ~g~de~Llln~~~~g~v~E--------~s~sNvf~v~~~~l~TP~l~~giL~Git 248 (337)
.|.+|+-|.-+ ||.|.. +..+|-|++.|.-=-- ++ ..+||||.
T Consensus 5 ~gIeEVnmfk~--dg~vihF~nPkVqaS~~aNTfvv~G~~e~K-~l-~e~lP~Il 55 (58)
T 3mcb_B 5 SGIEEVNMFTN--QGTVIHFNNPKVQASLAANTFTITGHAETK-QL-TEMLPSIL 55 (58)
T ss_dssp CCCCEEEEEET--TSEEEEEESCEEEEETTTTEEEEESCEEEE-EG-GGGTTGGG
T ss_pred CCeeEEEEEec--CCEEEEecCcceEEeeccceEEEecCCeee-EH-HHHChhhh
Confidence 46677766654 566555 4568999998753222 33 35778775
No 23
>2lfw_B NEPR anti sigma factor; signal transduction, response regulator, sigma factor mimicr sigma factor, general stress response, signaling protein; NMR {Sphingomonas SP}
Probab=25.82 E-value=51 Score=22.42 Aligned_cols=25 Identities=20% Similarity=0.173 Sum_probs=21.7
Q ss_pred CccHHHHHHHHHHHhhHccCCCCCC
Q 047617 306 GVGTVGQKLYEILTGIQSGCIEDEM 330 (337)
Q Consensus 306 ~~g~~~~~L~~~~~~~~~~~~~~~~ 330 (337)
..+.|..+|++.|.+++...++|.+
T Consensus 24 ~~~~Ig~~LR~~Yd~vv~E~VPDrF 48 (62)
T 2lfw_B 24 KDRDMGAALRSAYQKTIEEQVPDEM 48 (62)
T ss_dssp SSTTHHHHHHHHHHTTTSSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhccCCCHHH
Confidence 4778999999999999999988743
No 24
>4gf0_A Glutathione S-transferase; GST, enzyme function initiative, EFI, structural genomics; HET: GSH; 1.75A {Sulfitobacter}
Probab=23.81 E-value=52 Score=27.09 Aligned_cols=63 Identities=6% Similarity=-0.041 Sum_probs=41.8
Q ss_pred HHHHHHHcCCcEEEEecCHHHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHHHHHHHHHH
Q 047617 252 IIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEIL 318 (337)
Q Consensus 252 vl~~a~~~Gi~v~e~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~~~~L~~~~ 318 (337)
|.=++++.|++.+...+.+..-....+-|+.-+-.|-+||-.++ +|..+. ..+.|++.|-+.|
T Consensus 17 vr~~L~e~gl~ye~~~v~~~~~~~~~~~~l~~nP~g~vP~L~~d-~g~~l~---ES~aI~~YL~~~~ 79 (215)
T 4gf0_A 17 VAIAIEEAALPYQPVRVDFATAEQTKPDYLAINPKGRVPALRLE-DDTILT---ETGALLDYVAAIA 79 (215)
T ss_dssp HHHHHHHTTCCEEEEECCGGGTGGGSHHHHTTCTTCCSCEEECT-TSCEEE---CHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCEEEEECCCCCccCCHHHHHhCCCCCcceEEec-CCcEEe---chHHHHHHHHHhC
Confidence 33356678999999998776544444445555567999998875 455542 3666777776655
No 25
>3lkx_A Transcription factor BTF3; beta-barrel, chaperone; 2.50A {Homo sapiens}
Probab=22.83 E-value=91 Score=21.46 Aligned_cols=45 Identities=18% Similarity=0.304 Sum_probs=26.9
Q ss_pred CCCCeEEEEecCCCCeEEe--------cCceeEEEEECCEEEeCCCCCCCCCChHHH
Q 047617 202 KGFTDVLFLDAVTGKYVEE--------ASTSNIFVVKENVISTPPTNGTILPGITRK 250 (337)
Q Consensus 202 ~g~de~Llln~~~~g~v~E--------~s~sNvf~v~~~~l~TP~l~~giL~GitR~ 250 (337)
.|.+|+-|.-+ ||.|.. +..+|-|++.|.-=-- ++ ..+||||.-|
T Consensus 5 ~gIeEVnmfk~--dg~vihF~nPkVqaS~~aNT~vv~G~~e~K-~l-~ellP~Il~q 57 (66)
T 3lkx_A 5 SGIEEVNMFTN--QGTVIHFNNPKVQASLAANTFTITGHAETK-QL-TEMLPSILNQ 57 (66)
T ss_dssp CCEEEEEEEET--TSEEEEEESCEEEEECC-CEEEEESCEEEE-EG-GGGTTGGGGG
T ss_pred CCeeEEEEEec--CCEEEEecCcceEEeeccCeeEecCCCEEe-EH-HHHChhhhhc
Confidence 35566666654 566555 4669999998853333 33 4578887543
No 26
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=22.55 E-value=86 Score=23.68 Aligned_cols=79 Identities=19% Similarity=0.215 Sum_probs=44.6
Q ss_pred CCCCCChHHHHHH-HHHHHcCCcEEE---------EecCHHHHhccceeeeecCccceEEEEEEEeCCeEEeeCCCccHH
Q 047617 241 GTILPGITRKSII-EIARVLGYQVEE---------RAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTV 310 (337)
Q Consensus 241 ~giL~GitR~~vl-~~a~~~Gi~v~e---------~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~~~~~g~~ 310 (337)
.|+=...|-...| +.|+++|+.+.. -.++.+|+.+||-+++.+.. .+- -.++ .|+++ +..+....
T Consensus 13 tGiAhTymAaeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~-~v~-~~RF--~GK~v-~~~~v~~a 87 (106)
T 2r48_A 13 NGIAHTYMAAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADR-SVN-KDRF--IGKKL-LSVGVQDG 87 (106)
T ss_dssp SCSHHHHHHHHHHHHHHHHHTCEEEEEEEETTEEESCCCHHHHHHCSEEEEEESS-CCC-CGGG--TTSBE-EEECHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCccCCCCHHHHHhCCEEEEEeCC-ccC-HhHc--CCCeE-EEeCHHHH
Confidence 3444444444444 467778987654 25999999999999998874 322 2333 45554 33233333
Q ss_pred HHHHHHHHHhhHcc
Q 047617 311 GQKLYEILTGIQSG 324 (337)
Q Consensus 311 ~~~L~~~~~~~~~~ 324 (337)
.+.=.+.+.+...+
T Consensus 88 i~~p~~~l~~a~~~ 101 (106)
T 2r48_A 88 IRKPEELIQKALNG 101 (106)
T ss_dssp HHCHHHHHHHHHHC
T ss_pred HHCHHHHHHHHHhc
Confidence 33333344554443
No 27
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=21.82 E-value=1.6e+02 Score=21.82 Aligned_cols=42 Identities=21% Similarity=0.234 Sum_probs=31.1
Q ss_pred CChHHHHHHHHHHH---cCCcEEEEecC---HHHHhccceeeeecCcc
Q 047617 245 PGITRKSIIEIARV---LGYQVEERAIL---VEELFDAEEVFCTGTAV 286 (337)
Q Consensus 245 ~GitR~~vl~~a~~---~Gi~v~e~~i~---~~eL~~adevfltnt~~ 286 (337)
-|-|++..-.+++. .|.+++.-++. .+++.++|-+++.+.+.
T Consensus 10 tGnT~~~a~~i~~~l~~~g~~v~~~~~~~~~~~~l~~~d~vi~g~p~y 57 (137)
T 2fz5_A 10 TGNTEAMANEIEAAVKAAGADVESVRFEDTNVDDVASKDVILLGCPAM 57 (137)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCEEEEETTSCCHHHHHTCSEEEEECCCB
T ss_pred CChHHHHHHHHHHHHHhCCCeEEEEEcccCCHHHHhcCCEEEEEcccc
Confidence 48888777665554 47777766654 67899999999888775
No 28
>2qho_B E3 ubiquitin-protein ligase EDD1; protein-protein complex, protein binding/ligase complex; 1.85A {Homo sapiens}
Probab=20.39 E-value=34 Score=22.13 Aligned_cols=22 Identities=27% Similarity=0.366 Sum_probs=18.5
Q ss_pred CCCCChHHHHHHHHHHHcCCcE
Q 047617 242 TILPGITRKSIIEIARVLGYQV 263 (337)
Q Consensus 242 giL~GitR~~vl~~a~~~Gi~v 263 (337)
.+|+|-+|+.|+..++.-++.|
T Consensus 18 ~VLqgksR~vIirELqrTnLdV 39 (53)
T 2qho_B 18 VVLQGKSRSVIIRELQRTNLDV 39 (53)
T ss_dssp HHSTTCCHHHHHHHHHHTTTCH
T ss_pred HHhcCCcHHHHHHHHHHhCccH
Confidence 4799999999999888877654
Done!