BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047619
(430 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 106/167 (63%), Gaps = 2/167 (1%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLK-ELK 322
+L F L + A+DNFS N LG GGFG VYKG L DG +AVKRL + QG + + +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 323 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQ-ERCKILDWSKRFH 381
EV + S HRNL++L G C+ E+LL+Y ++ N S+ S + ++ E LDW KR
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
I G+ARG+ YLH +IIHRD+KA+N+LLD++ + DFGLA+
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 190
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 105/167 (62%), Gaps = 2/167 (1%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLK-ELK 322
+L F L + A+DNF N LG GGFG VYKG L DG +AVKRL + QG + + +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 323 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQ-ERCKILDWSKRFH 381
EV + S HRNL++L G C+ E+LL+Y ++ N S+ S + ++ E LDW KR
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
I G+ARG+ YLH +IIHRD+KA+N+LLD++ + DFGLA+
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 101/170 (59%), Gaps = 11/170 (6%)
Query: 267 LFELATIANATDNFSIN---NKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKN 323
+EL + N D I+ NK+GEGGFG VYKG V+ +AVK+L+ + + +ELK
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQ 75
Query: 324 ----EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR 379
E+ + +K QH NLV+LLG G++ L+Y ++PN SL + + L W R
Sbjct: 76 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 135
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
I G A G+ +LH++ IHRD+K++N+LLD+ KISDFGLARA
Sbjct: 136 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 101/170 (59%), Gaps = 11/170 (6%)
Query: 267 LFELATIANATDNFSIN---NKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKN 323
+EL + N D I+ NK+GEGGFG VYKG V+ +AVK+L+ + + +ELK
Sbjct: 11 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQ 69
Query: 324 ----EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR 379
E+ + +K QH NLV+LLG G++ L+Y ++PN SL + + L W R
Sbjct: 70 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 129
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
I G A G+ +LH++ IHRD+K++N+LLD+ KISDFGLARA
Sbjct: 130 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 176
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 101/170 (59%), Gaps = 11/170 (6%)
Query: 267 LFELATIANATDNFSIN---NKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKN 323
+EL + N D I+ NK+GEGGFG VYKG V+ +AVK+L+ + + +ELK
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQ 75
Query: 324 ----EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR 379
E+ + +K QH NLV+LLG G++ L+Y ++PN SL + + L W R
Sbjct: 76 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 135
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
I G A G+ +LH++ IHRD+K++N+LLD+ KISDFGLARA
Sbjct: 136 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 99/170 (58%), Gaps = 11/170 (6%)
Query: 267 LFELATIANATDNFSIN---NKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKN 323
+EL + N D I+ NK GEGGFG VYKG V+ +AVK+L+ + + +ELK
Sbjct: 8 FYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQ 66
Query: 324 ----EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR 379
E+ + +K QH NLV+LLG G++ L+Y + PN SL + + L W R
Sbjct: 67 QFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXR 126
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
I G A G+ +LH++ IHRD+K++N+LLD+ KISDFGLARA
Sbjct: 127 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 173
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 100/160 (62%), Gaps = 4/160 (2%)
Query: 270 LATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFS 329
L + AT+NF +G G FG VYKG L DG ++A+KR + S QG++E + E+ S
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKI-LDWSKRFHIICGTAR 388
+H +LV L+G C + E +LIY+++ N +L ++ + + + W +R I G AR
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
G+ YLH + IIHRD+K+ N+LLD++ PKI+DFG+++
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK 187
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 100/160 (62%), Gaps = 4/160 (2%)
Query: 270 LATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFS 329
L + AT+NF +G G FG VYKG L DG ++A+KR + S QG++E + E+ S
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKI-LDWSKRFHIICGTAR 388
+H +LV L+G C + E +LIY+++ N +L ++ + + + W +R I G AR
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
G+ YLH + IIHRD+K+ N+LLD++ PKI+DFG+++
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK 187
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 88/164 (53%), Gaps = 23/164 (14%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISE----QGLKELKNEVILFSKLQHRN 335
++ +G GGFG VY+ + G E+AVK + Q ++ ++ E LF+ L+H N
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCK---ILDWSKRFHIICGTARGVMY 392
++ L G C++ L+ EF L+ + +R +++W+ + ARG+ Y
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNR-VLSGKRIPPDILVNWAVQI------ARGMNY 120
Query: 393 LHQDSRLRIIHRDLKASNVLLDQDMNP--------KISDFGLAR 428
LH ++ + IIHRDLK+SN+L+ Q + KI+DFGLAR
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 14/190 (7%)
Query: 241 MSASELEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLV 300
MS ++ TEN + D+++P +L +I K+G G FG V++
Sbjct: 10 MSDYDIPTTENLYFQGAMDGDDMDIPWCDL----------NIKEKIGAGSFGTVHRAEW- 58
Query: 301 DGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPN 358
G ++AVK L + + + E EV + +L+H N+V +G Q ++ E++
Sbjct: 59 HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118
Query: 359 KSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMN 418
SL + + LD +R + A+G+ YLH + I+HRDLK+ N+L+D+
Sbjct: 119 GSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYT 177
Query: 419 PKISDFGLAR 428
K+ DFGL+R
Sbjct: 178 VKVCDFGLSR 187
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG G FG V+ G + ++AVK L K ++ E L LQH LV
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 70
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E +I EF+ SL F+ E K+L K A G+ Y+
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE--- 126
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL+A+NVL+ + + KI+DFGLAR
Sbjct: 127 RKNYIHRDLRAANVLVSESLMCKIADFGLARVI 159
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKELKNEVILFSKLQ 332
N + +LGEG FG V+ D +AVK L S+ K+ E L + LQ
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKI----------LDWSKRFHI 382
H ++VK G C++G+ ++++E++ + L+ F+ + L S+ HI
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G++YL + +HRDL N L+ +++ KI DFG++R
Sbjct: 134 AQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 14/190 (7%)
Query: 241 MSASELEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLV 300
MS ++ TEN + D+++P +L +I K+G G FG V++
Sbjct: 10 MSDYDIPTTENLYFQGAMDGDDMDIPWCDL----------NIKEKIGAGSFGTVHRAEW- 58
Query: 301 DGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPN 358
G ++AVK L + + + E EV + +L+H N+V +G Q ++ E++
Sbjct: 59 HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118
Query: 359 KSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMN 418
SL + + LD +R + A+G+ YLH + I+HR+LK+ N+L+D+
Sbjct: 119 GSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYT 177
Query: 419 PKISDFGLAR 428
K+ DFGL+R
Sbjct: 178 VKVCDFGLSR 187
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 272 TIANATD------NFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELK 322
+I +ATD N+ + +G+G F V ++ G+E+AVK + K ++ L++L
Sbjct: 3 SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 323 NEVILFSKLQHRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFH 381
EV + L H N+VKL I+ E+ L L+ E+ + ++ R K + +F
Sbjct: 63 REVRIMKILNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 121
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
I V Y HQ I+HRDLKA N+LLD DMN KI+DFG + F
Sbjct: 122 QIVS---AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEF 164
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 91/163 (55%), Gaps = 10/163 (6%)
Query: 270 LAT-IANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK--ISEQGL-KELKNE 324
LAT I ++F + N LG+G F VY+ ++ G E+A+K + K + + G+ + ++NE
Sbjct: 2 LATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 325 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
V + +L+H ++++L L+ E N ++ ++ + R K ++ H +
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMH 119
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
G++YLH I+HRDL SN+LL ++MN KI+DFGLA
Sbjct: 120 QIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 167
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 20/178 (11%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQG----- 317
E P L T+A+ + ++G+GGFG V+KG LV D +A+K L +G
Sbjct: 7 EFPKSRLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 318 --LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILD 375
+E + EV + S L H N+VKL G + ++ EFVP L + D + +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIK 120
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLL-----DQDMNPKISDFGLAR 428
WS + ++ A G+ Y+ Q+ I+HRDL++ N+ L + + K++DFGL++
Sbjct: 121 WSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 168
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 83/156 (53%), Gaps = 11/156 (7%)
Query: 279 NFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 335
N+ + +G+G F V ++ G+E+A+K + K ++ L++L EV + L H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 336 LVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
+VKL I+ E+ L LI E+ + ++ R K + +F I V Y H
Sbjct: 76 IVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS---AVQYCH 131
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
Q RI+HRDLKA N+LLD DMN KI+DFG + F
Sbjct: 132 QK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 164
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 271 ATIANATDNFSINNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEV 325
I ++ N +G G FG VY GTL+D G++I AVK L++I++ G + + E
Sbjct: 20 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEG 79
Query: 326 ILFSKLQHRNLVKLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
I+ H N++ LLG C++ E L++ ++ + L +FI ++ + F +
Sbjct: 80 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-- 137
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A+G+ YL + + +HRDL A N +LD+ K++DFGLAR
Sbjct: 138 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 83/156 (53%), Gaps = 11/156 (7%)
Query: 279 NFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 335
N+ + +G+G F V ++ G+E+A+K + K ++ L++L EV + L H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 336 LVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
+VKL I+ E+ L LI E+ + ++ R K + +F I V Y H
Sbjct: 73 IVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS---AVQYCH 128
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
Q RI+HRDLKA N+LLD DMN KI+DFG + F
Sbjct: 129 QK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 161
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 148
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 149
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 271 ATIANATDNFSINNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEV 325
I ++ N +G G FG VY GTL+D G++I AVK L++I++ G + + E
Sbjct: 18 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEG 77
Query: 326 ILFSKLQHRNLVKLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
I+ H N++ LLG C++ E L++ ++ + L +FI ++ + F +
Sbjct: 78 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-- 135
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A+G+ YL + + +HRDL A N +LD+ K++DFGLAR
Sbjct: 136 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 149
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 148
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 271 ATIANATDNFSINNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEV 325
I ++ N +G G FG VY GTL+D G++I AVK L++I++ G + + E
Sbjct: 15 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEG 74
Query: 326 ILFSKLQHRNLVKLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
I+ H N++ LLG C++ E L++ ++ + L +FI ++ + F +
Sbjct: 75 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-- 132
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A+G+ YL + + +HRDL A N +LD+ K++DFGLAR
Sbjct: 133 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 271 ATIANATDNFSINNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEV 325
I ++ N +G G FG VY GTL+D G++I AVK L++I++ G + + E
Sbjct: 21 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEG 80
Query: 326 ILFSKLQHRNLVKLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
I+ H N++ LLG C++ E L++ ++ + L +FI ++ + F +
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-- 138
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A+G+ YL + + +HRDL A N +LD+ K++DFGLAR
Sbjct: 139 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + +LG G FG V+ G + ++AVK L K ++ E L LQH LV
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 71
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E +I E++ SL F+ E K+L K A G+ Y+
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE--- 127
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL+A+NVL+ + + KI+DFGLAR
Sbjct: 128 RKNYIHRDLRAANVLVSESLMCKIADFGLARVI 160
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ +L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 208
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 150
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 149
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ +L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 147
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 149
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ +L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 154
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 337
N +G G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 338 KLLGCCIQGE-EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
LLG C++ E L++ ++ + L +FI ++ + F + A+G+ +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 150
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N +LD+ K++DFGLAR
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 279 NFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 335
N+ + +G+G F V ++ G+E+AVK + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 336 LVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
+VKL I+ E+ L L+ E+ + ++ R K + +F I V Y H
Sbjct: 75 IVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCH 130
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
Q I+HRDLKA N+LLD DMN KI+DFG + F
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 20/178 (11%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQG----- 317
E P L T+A+ + ++G+GGFG V+KG LV D +A+K L +G
Sbjct: 7 EFPKSRLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 318 --LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILD 375
+E + EV + S L H N+VKL G + ++ EFVP L + D + +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIK 120
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLL-----DQDMNPKISDFGLAR 428
WS + ++ A G+ Y+ Q+ I+HRDL++ N+ L + + K++DFG ++
Sbjct: 121 WSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 279 NFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 335
N+ + +G+G F V ++ G+E+AVK + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 336 LVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
+VKL I+ E+ L L+ E+ + ++ R K + +F I V Y H
Sbjct: 75 IVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCH 130
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
Q I+HRDLKA N+LLD DMN KI+DFG + F
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 279 NFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 335
N+ + +G+G F V ++ G+E+AVK + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 336 LVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
+VKL I+ E+ L L+ E+ + ++ R K + +F I V Y H
Sbjct: 75 IVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCH 130
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
Q I+HRDLKA N+LLD DMN KI+DFG + F
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 8/148 (5%)
Query: 285 KLGEGGFGPVYKGTLVDGQEIAVKRLSKISE-QGLKELK-NEVILFSKLQHRNLVKLLGC 342
K+GEG +G VYK G+ +A+KR+ +E +G+ E+ L +L H N+V L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 343 CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRII 402
L++EF+ K L + D+ + + D + ++ RGV + HQ RI+
Sbjct: 88 IHSERCLTLVFEFM-EKDLKK-VLDENKTGLQDSQIKIYLY-QLLRGVAHCHQH---RIL 141
Query: 403 HRDLKASNVLLDQDMNPKISDFGLARAF 430
HRDLK N+L++ D K++DFGLARAF
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAF 169
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 20/155 (12%)
Query: 286 LGEGGFGPVYKGTLVDGQE-----IAVKRLSKIS-EQGLKELKNEVILFSKLQHRNLVKL 339
LG G FG VYKG V E +A+K L++ + + E +E ++ + + H +LV+L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 340 LGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKILDWSKRFHIICGTARGVMYLHQ 395
LG C+ +L + + +P+ L ++ + + +L+W + A+G+MYL +
Sbjct: 106 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLEE 158
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R++HRDL A NVL+ + KI+DFGLAR
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 190
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 8/148 (5%)
Query: 285 KLGEGGFGPVYKGTLVDGQEIAVKRLSKISE-QGLKELK-NEVILFSKLQHRNLVKLLGC 342
K+GEG +G VYK G+ +A+KR+ +E +G+ E+ L +L H N+V L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 343 CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRII 402
L++EF+ K L + D+ + + D + ++ RGV + HQ RI+
Sbjct: 88 IHSERCLTLVFEFM-EKDLKK-VLDENKTGLQDSQIKIYLY-QLLRGVAHCHQH---RIL 141
Query: 403 HRDLKASNVLLDQDMNPKISDFGLARAF 430
HRDLK N+L++ D K++DFGLARAF
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAF 169
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 20/178 (11%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQG----- 317
E P L T+A+ + ++G+GGFG V+KG LV D +A+K L +G
Sbjct: 7 EFPKSRLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 318 --LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILD 375
+E + EV + S L H N+VKL G + ++ EFVP L + D + +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIK 120
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLL-----DQDMNPKISDFGLAR 428
WS + ++ A G+ Y+ Q+ I+HRDL++ N+ L + + K++DF L++
Sbjct: 121 WSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 20/153 (13%)
Query: 286 LGEGGFGPVYKGTLVDGQE-----IAVKRLSKIS-EQGLKELKNEVILFSKLQHRNLVKL 339
LG G FG VYKG V E +A+K L++ + + E +E ++ + + H +LV+L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 340 LGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKILDWSKRFHIICGTARGVMYLHQ 395
LG C+ +L + + +P+ L ++ + + +L+W + A+G+MYL +
Sbjct: 83 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLEE 135
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R++HRDL A NVL+ + KI+DFGLAR
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLAR 165
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 398
+G + ++ ++ SL + E + K I TARG+ YLH S
Sbjct: 85 FMGYST-APQLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS- 140
Query: 399 LRIIHRDLKASNVLLDQDMNPKISDFGLA 427
IIHRDLK++N+ L +D KI DFGLA
Sbjct: 141 --IIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 14 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 73
Query: 340 LGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRL 399
+G + + ++ ++ SL + E + K I TARG+ YLH S
Sbjct: 74 MGYSTK-PQLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS-- 128
Query: 400 RIIHRDLKASNVLLDQDMNPKISDFGLA 427
IIHRDLK++N+ L +D KI DFGLA
Sbjct: 129 -IIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 279 NFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 335
N+ + +G+G F V ++ G+E+AV+ + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 336 LVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
+VKL I+ E+ L L+ E+ + ++ R K + +F I V Y H
Sbjct: 75 IVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCH 130
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
Q I+HRDLKA N+LLD DMN KI+DFG + F
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 398
+G + + ++ ++ SL + E + K I TARG+ YLH S
Sbjct: 85 FMGYSTK-PQLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS- 140
Query: 399 LRIIHRDLKASNVLLDQDMNPKISDFGLA 427
IIHRDLK++N+ L +D KI DFGLA
Sbjct: 141 --IIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 279 NFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 335
N+ + +G+G F V ++ G+E+AV+ + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 336 LVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
+VKL I+ E+ L L+ E+ + ++ R K + +F I V Y H
Sbjct: 75 IVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCH 130
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
Q I+HRDLKA N+LLD DMN KI+DFG + F
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQE-----IAVKRLSKISEQGLKE-LKNEVILFSK 330
+N LG G FG V + T G+E +AVK L + KE L +E+ + S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 331 L-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-------FDQERCKILDWSKRFHI 382
L QH N+V LLG C G L+I E+ L +F+ D+E + L+ H
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A+G+ +L + IHRD+ A NVLL KI DFGLAR
Sbjct: 158 SSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR 200
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQE-----IAVKRLSKISEQGLKE-LKNEVILFSK 330
+N LG G FG V + T G+E +AVK L + KE L +E+ + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 331 L-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-------FDQERCKILDWSKRFHI 382
L QH N+V LLG C G L+I E+ L +F+ D+E + L+ H
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A+G+ +L + IHRD+ A NVLL KI DFGLAR
Sbjct: 166 SSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR 208
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI EF+P SL ++ Q+ + +D K +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK- 136
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 285 KLGEGGFGPVYKG---TLVDGQE---IAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
+LGEG FG V+ L+ Q+ +AVK L + SE ++ + E L + LQH+++V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQ-ERCKI-----------LDWSKRFHIICGT 386
G C +G L+++E++ + L+ F+ K+ L + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G++YL + L +HRDL N L+ Q + KI DFG++R
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 285 KLGEGGFGPVYKG---TLVDGQE---IAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
+LGEG FG V+ L+ Q+ +AVK L + SE ++ + E L + LQH+++V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQ-ERCKI-----------LDWSKRFHIICGT 386
G C +G L+++E++ + L+ F+ K+ L + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G++YL + L +HRDL N L+ Q + KI DFG++R
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQE-----IAVKRLSKISEQGLKE-LKNEVILFSK 330
+N LG G FG V + T G+E +AVK L + KE L +E+ + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 331 L-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
L QH N+V LLG C G L+I E+ L +F+ + + ++L+ F I TA
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTAST 163
Query: 390 VMYLHQDSRL----------RIIHRDLKASNVLLDQDMNPKISDFGLAR 428
LH S++ IHRD+ A NVLL KI DFGLAR
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E++ N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 149
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGLAR
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVL 197
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 31/192 (16%)
Query: 263 LELPLF------ELATIANATDNFSINNKLGEGGFGPVYKGTLV------DGQEIAVKRL 310
+E+PL +L I+ + F +LGE FG VYKG L Q +A+K L
Sbjct: 7 MEMPLINQHKQAKLKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL 64
Query: 311 SKISEQGLKE-LKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF--- 366
+E L+E ++E +L ++LQH N+V LLG + + +I+ + + L F+
Sbjct: 65 KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRS 124
Query: 367 ----------DQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD 416
D+ L+ H++ A G+ YL S ++H+DL NVL+
Sbjct: 125 PHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDK 181
Query: 417 MNPKISDFGLAR 428
+N KISD GL R
Sbjct: 182 LNVKISDLGLFR 193
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 285 KLGEGGFGPVYKG---TLVDGQE---IAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
+LGEG FG V+ L+ Q+ +AVK L + SE ++ + E L + LQH+++V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQ-ERCKI-----------LDWSKRFHIICGT 386
G C +G L+++E++ + L+ F+ K+ L + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G++YL + L +HRDL N L+ Q + KI DFG++R
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q + +D K +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYL---G 134
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 23/164 (14%)
Query: 285 KLGEGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLV 337
+LGE FG VYKG L Q +A+K L +E L+E ++E +L ++LQH N+V
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIF-------------DQERCKILDWSKRFHIIC 384
LLG + + +I+ + + L F+ D+ L+ H++
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G+ YL S ++H+DL NVL+ +N KISD GL R
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 176
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLH 394
+G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 74 FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 126
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
S IIHRDLK++N+ L +D+ KI DFGLA
Sbjct: 127 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLH 394
+G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 74 FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 126
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
S IIHRDLK++N+ L +D+ KI DFGLA
Sbjct: 127 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLH 394
+G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 97 FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 149
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
S IIHRDLK++N+ L +D+ KI DFGLA
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 36 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 95
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLH 394
+G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 96 FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 148
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
S IIHRDLK++N+ L +D+ KI DFGLA
Sbjct: 149 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLH 394
+G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 97 FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 149
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
S IIHRDLK++N+ L +D+ KI DFGLA
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 29 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 88
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLH 394
+G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 89 FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 141
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
S IIHRDLK++N+ L +D+ KI DFGLA
Sbjct: 142 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLH 394
+G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 69 FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
S IIHRDLK++N+ L +D+ KI DFGLA
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLH 394
+G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 69 FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
S IIHRDLK++N+ L +D+ KI DFGLA
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 14/153 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLH 394
+G + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 69 FMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
S IIHRDLK++N+ L +D+ KI DFGLA
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++ ++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 11 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 70
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLH 394
+G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 71 FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 123
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
S IIHRDLK++N+ L +D+ KI DFGLA
Sbjct: 124 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK- 164
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 165 --RYIHRDLATRNILVENENRVKIGDFGLTKVL 195
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 134
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E++ N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 149
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 150 VGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 136
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 169
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 137
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 170
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK- 132
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 133 --RYIHRDLATRNILVENENRVKIGDFGLTKVL 163
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 138
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 171
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK- 137
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 138 --RYIHRDLATRNILVENENRVKIGDFGLTKVL 168
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 88/162 (54%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L +F+ I L S F ++ G A
Sbjct: 64 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA- 120
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 121 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 156
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 6 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E++ N SLDSF+ D + I +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 120
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 121 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 168
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 129
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 162
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 33 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E++ N SLDSF+ D + I +
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 147
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 148 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 195
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E++ N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 149
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK- 151
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 152 --RYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK- 151
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHRDL N+L++ + KI DFGL +
Sbjct: 152 --RYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E++ N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 149
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E++ N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 149
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E++ N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 149
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 23 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E++ N SLDSF+ D + I +
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 137
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 138 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 185
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 275 NATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKI----SEQGLKELKNEVILFSK 330
N D + I +LG+G FG VYK +E +V +K+ SE+ L++ E+ + +
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 90
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICG-TARG 389
H N+VKLL ++ EF ++D+ + + ER + ++C T
Sbjct: 91 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDA 147
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ YLH + +IIHRDLKA N+L D + K++DFG++
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 275 NATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKI----SEQGLKELKNEVILFSK 330
N D + I +LG+G FG VYK +E +V +K+ SE+ L++ E+ + +
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 90
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICG-TARG 389
H N+VKLL ++ EF ++D+ + + ER + ++C T
Sbjct: 91 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDA 147
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ YLH + +IIHRDLKA N+L D + K++DFG++
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 279 NFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 335
N+ + +G+G F V ++ G+E+AVK + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 336 LVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
+VKL I+ E+ L L+ E+ + ++ R K + +F I V Y H
Sbjct: 75 IVKLFEV-IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS---AVQYCH 130
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
Q I+HRDLKA N+LLD D N KI+DFG + F
Sbjct: 131 QKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF 163
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 275 NATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKI----SEQGLKELKNEVILFSK 330
N D + I +LG+G FG VYK +E +V +K+ SE+ L++ E+ + +
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 90
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICG-TARG 389
H N+VKLL ++ EF ++D+ + + ER + ++C T
Sbjct: 91 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDA 147
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ YLH + +IIHRDLKA N+L D + K++DFG++
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E++ N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 149
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL R
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 70 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 124
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 125 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 160
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 118 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 153
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 280 FSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
F + KLGEG +G VYK + GQ +A+K++ E L+E+ E+ + + ++VK
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVK 88
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 398
G + + ++ E+ S+ I + R K L + I+ T +G+ YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLH---F 143
Query: 399 LRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+R IHRD+KA N+LL+ + + K++DFG+A
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 279 NFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 335
N+ + +G+G F V ++ G+E+AVK + K ++ L++L EV + L H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+VKL + L+ E+ + ++ K + +F I V Y HQ
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS---AVQYCHQ 124
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
I+HRDLKA N+LLD DMN KI+DFG + F
Sbjct: 125 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 156
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 118 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 153
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 64 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 120
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 121 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 156
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 62 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 118
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 119 ---FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF 154
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 119
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 120 ---FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF 155
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 118 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 153
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 64 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 120
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 121 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 156
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 119
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 120 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 155
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 65 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 121
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 122 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 157
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 119
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 120 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 155
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 62 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 118
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 119 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 154
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 118 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 153
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 62 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 118
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 119 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 154
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 117 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 152
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 67 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 121
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 122 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 157
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 70 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 124
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 125 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 160
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 118 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 153
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 117 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 152
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 117 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 152
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 118 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 153
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 118 ---FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF 153
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 117 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 152
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 64 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 118
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 119 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 154
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 118 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 153
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQE-----IAVKRLSKISEQGLKE-LKNEVILFSK 330
+N LG G FG V + T G+E +AVK L + KE L +E+ + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 331 L-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
L QH N+V LLG C G L+I E+ L +F+ + + ++L+ F I T
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTLST 163
Query: 390 VMYLHQDSRL----------RIIHRDLKASNVLLDQDMNPKISDFGLAR 428
LH S++ IHRD+ A NVLL KI DFGLAR
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 285 KLGEGGFGPVYK---GTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 340 LGCCIQ-GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
G C G L LI E++P SL ++ Q+ + +D K +G+ YL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK- 134
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R IHR+L N+L++ + KI DFGL +
Sbjct: 135 --RYIHRNLATRNILVENENRVKIGDFGLTKVL 165
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++E V ++ L +F+ I L S F ++ G A
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 117 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 152
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ +G+
Sbjct: 63 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGL 116
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 117 SFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 153
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 243 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 297
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLAR 328
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E + N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI----QL 149
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 150 VGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E + N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI----QL 149
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 243 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 297
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLAR 328
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ + L F+ I L S F ++ G A
Sbjct: 62 HPNIVKLLDV-IHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 118
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 119 ---FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF 154
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 321
+ E A +AT N SI+ +G G FG V G L +EI A+K L +E+ ++
Sbjct: 6 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWSKR 379
E + + H N+++L G + + +++ E + N SLDSF+ D + I +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI----QL 120
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 121 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 168
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ + L F+ I L S F ++ G A
Sbjct: 64 HPNIVKLLDV-IHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 120
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 121 ---FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF 156
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ + L F+ I L S F ++ G A
Sbjct: 63 HPNIVKLLDV-IHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA- 119
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 120 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 155
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 325
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 326 QLY-AVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 380
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 381 RMNYVHRDLRAANILVGENLVCKVADFGLAR 411
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 16/162 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 388
H N+VKLL I E KL L++EF+ + L F+ I L S F ++ G A
Sbjct: 64 HPNIVKLLDV-IHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA- 120
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 121 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 156
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 282 INNKLGEGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 336
I +G G G V G L V GQ +A+K L + +E+ ++ +E + + H N+
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE-RCKILDWSKRFHIICGTARGVMYLHQ 395
++L G +G +++ E++ N SLD+F+ + + I+ + ++ G G+ YL
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM---QLVGMLRGVGAGMRYL-- 167
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
S L +HRDL A NVL+D ++ K+SDFGL+R
Sbjct: 168 -SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 26/167 (15%)
Query: 276 ATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 332
+ +NF K+GEG +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHI--------I 383
H N+VKLL I E KL L++E V DQ+ K +D S I +
Sbjct: 64 HPNIVKLLDV-IHTENKLYLVFEHV----------DQDLKKFMDASALTGIPLPLIKSYL 112
Query: 384 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+G+ + H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 156
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 282 INNKLGEGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 336
I +G G G V G L V GQ +A+K L + +E+ ++ +E + + H N+
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE-RCKILDWSKRFHIICGTARGVMYLHQ 395
++L G +G +++ E++ N SLD+F+ + + I+ + ++ G G+ YL
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM---QLVGMLRGVGAGMRYL-- 167
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
S L +HRDL A NVL+D ++ K+SDFGL+R
Sbjct: 168 -SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 66 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 120
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 121 RMNYVHRDLRAANILVGENLVCKVADFGLAR 151
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 286 LGEGGFGPVYKGTLVDGQ-----EIAVKRL-SKISEQGLKELKNEVILFSKLQHRNLVKL 339
+G G FG VYKG L +A+K L + +E+ + E + + H N+++L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 340 LGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRL 399
G + + ++I E++ N +LD F+ +E+ + ++ G A G+ YL + +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 400 RIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 243 QLYAV-VSEEPIYIVGEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 297
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLAR 328
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 68 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 122
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 123 RMNYVHRDLRAANILVGENLVCKVADFGLAR 153
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 70 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 124
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 125 RMNYVHRDLRAANILVGENLVCKVADFGLAR 155
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 67 QLYAV-VSEEPIXIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 121
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 122 RMNYVHRDLRAANILVGENLVCKVADFGLAR 152
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 77
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 78 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 135
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 136 ---YIHRDLRAANILVSDTLSCKIADFGLAR 163
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 275 NATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELK-NEVILFSKLQ 332
+++ F KLG G + VYKG G +A+K + SE+G E+ L +L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPN---KSLDS-FIFDQERCKILDWSKRFHIICGTA 387
H N+V+L I E KL L++EF+ N K +DS + + R L+ K F
Sbjct: 62 HENIVRLYDV-IHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQ--WQLL 118
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+G+ + H++ +I+HRDLK N+L+++ K+ DFGLARAF
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 81
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 82 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 139
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 140 ---YIHRDLRAANILVSDTLSCKIADFGLAR 167
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 73
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 74 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 132 ---YIHRDLRAANILVSDTLSCKIADFGLAR 159
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 72
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 73 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 130
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 131 ---YIHRDLRAANILVSDTLSCKIADFGLAR 158
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 81/157 (51%), Gaps = 25/157 (15%)
Query: 286 LGEGGFG--------PVYKGTLVDGQEIAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 336
LGEG FG P GT G+ +AVK L + Q K E+ + L H ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 337 VKLLGCCI-QGEEKL-LIYEFVPNKSLDSFIFDQE--RCKILDWSKRFHIICGTARGVMY 392
+K GCC QGE+ L L+ E+VP SL ++ ++L ++++ IC G+ Y
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---IC---EGMAY 132
Query: 393 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
LH IHR+L A NVLLD D KI DFGLA+A
Sbjct: 133 LHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKA 166
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 79
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 80 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 137
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 138 ---YIHRDLRAANILVSDTLSCKIADFGLAR 165
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 76
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 77 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 134
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 135 ---YIHRDLRAANILVSDTLSCKIADFGLAR 162
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 77
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 78 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 135
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 136 ---YIHRDLRAANILVSDTLSCKIADFGLAR 163
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 80
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 81 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 138
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 139 ---YIHRDLRAANILVSDTLSCKIADFGLAR 166
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 81/157 (51%), Gaps = 25/157 (15%)
Query: 286 LGEGGFG--------PVYKGTLVDGQEIAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 336
LGEG FG P GT G+ +AVK L + Q K E+ + L H ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 337 VKLLGCCI-QGEEKL-LIYEFVPNKSLDSFIFDQE--RCKILDWSKRFHIICGTARGVMY 392
+K GCC QGE+ L L+ E+VP SL ++ ++L ++++ IC G+ Y
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---IC---EGMAY 132
Query: 393 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
LH IHR+L A NVLLD D KI DFGLA+A
Sbjct: 133 LHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKA 166
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKELKNEVILFSKLQ 332
+ + +LGEG FG V+ D +AVK L + K+ + E L + LQ
Sbjct: 16 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ 75
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF-------------DQERCKILDWSKR 379
H ++VK G C G+ ++++E++ + L+ F+ ++ L S+
Sbjct: 76 HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 135
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
HI A G++YL + +HRDL N L+ ++ KI DFG++R
Sbjct: 136 LHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 66
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 67 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 124
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 125 ---YIHRDLRAANILVSDTLSCKIADFGLAR 152
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 85/153 (55%), Gaps = 12/153 (7%)
Query: 282 INNKLGEGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 336
I +G G FG V +G L G++ +A+K L +E+ +E +E + + +H N+
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFI-FDQERCKILDWSKRFHIICGTARGVMYLHQ 395
++L G +++ EF+ N +LDSF+ + + ++ + ++ G A G+ YL +
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAE 134
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 135 ---MSYVHRDLAARNILVNSNLVCKVSDFGLSR 164
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 85/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+ RL +E E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 118 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 153
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 85/160 (53%), Gaps = 16/160 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHR 334
+NF K+GEG +G VYK + G+ +A+ RL +E E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGV 390
N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H R++HRDLK N+L++ + K++DFGLARAF
Sbjct: 117 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 152
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVCEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 276 ATDNFSINNKLGEGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 328
A + +++ +LG+G FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKIL---DWSKRFH 381
+ ++V+LLG QG+ L+I E + L S++ + E +L SK
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 142
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R
Sbjct: 143 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 276 ATDNFSINNKLGEGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 328
A + +++ +LG+G FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKIL---DWSKRFH 381
+ ++V+LLG QG+ L+I E + L S++ + E +L SK
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 133
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R
Sbjct: 134 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 276 ATDNFSINNKLGEGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 328
A + +++ +LG+G FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKIL---DWSKRFH 381
+ ++V+LLG QG+ L+I E + L S++ + E +L SK
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R
Sbjct: 136 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 276 ATDNFSINNKLGEGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 328
A + +++ +LG+G FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKIL---DWSKRFH 381
+ ++V+LLG QG+ L+I E + L S++ + E +L SK
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R
Sbjct: 136 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 276 ATDNFSINNKLGEGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 328
A + +++ +LG+G FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKIL---DWSKRFH 381
+ ++V+LLG QG+ L+I E + L S++ + E +L SK
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQE-----IAVKRLSKISEQGLKE-LKNEVILFSK 330
+N LG G FG V + T G+E +AVK L + KE L +E+ + S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 331 L-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--------------------FDQE 369
L QH N+V LLG C G L+I E+ L +F+ D+E
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 370 RCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L+ H A+G+ +L + IHRD+ A NVLL KI DFGLAR
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR 206
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 276 ATDNFSINNKLGEGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 328
A + +++ +LG+G FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKIL---DWSKRFH 381
+ ++V+LLG QG+ L+I E + L S++ + E +L SK
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Query: 271 ATIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELK-NEVIL 327
A A + D + KLGEG +G VYK V + +A+KR+ + E+G+ EV L
Sbjct: 27 APSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSL 86
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
+LQHRN+++L LI+E+ N L ++ D+ + K F +
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM-DKNPDVSMRVIKSF--LYQLI 142
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLL---DQDMNP--KISDFGLARAF 430
GV + H SR R +HRDLK N+LL D P KI DFGLARAF
Sbjct: 143 NGVNFCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 276 ATDNFSINNKLGEGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 328
A + +++ +LG+G FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKIL---DWSKRFH 381
+ ++V+LLG QG+ L+I E + L S++ + E +L SK
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 32 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
L H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 91 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 85/153 (55%), Gaps = 12/153 (7%)
Query: 282 INNKLGEGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 336
I +G G FG V +G L G++ +A+K L +E+ +E +E + + +H N+
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFI-FDQERCKILDWSKRFHIICGTARGVMYLHQ 395
++L G +++ EF+ N +LDSF+ + + ++ + ++ G A G+ YL +
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAE 136
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 137 ---MSYVHRDLAARNILVNSNLVCKVSDFGLSR 166
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 276 ATDNFSINNKLGEGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 328
A + +++ +LG+G FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKIL---DWSKRFH 381
+ ++V+LLG QG+ L+I E + L S++ + E +L SK
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R
Sbjct: 128 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + K++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLV 76
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 276 ATDNFSINNKLGEGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 328
A + +++ +LG+G FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKIL---DWSKRFH 381
+ ++V+LLG QG+ L+I E + L S++ + E +L SK
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 164
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R
Sbjct: 165 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 46 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
L H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 105 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 74 QLYAV-VSEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVE--- 128
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLAR 159
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL A+N+L+ +++ K++DFGLAR
Sbjct: 132 RMNYVHRDLAAANILVGENLVCKVADFGLAR 162
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG G FG V+ T ++AVK + K ++ E + LQH LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCK-----ILDWSKRFHIICGTARGVMY 392
KL + E +I EF+ SL F+ E K ++D+S + A G+ +
Sbjct: 247 KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAF 299
Query: 393 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ Q + IHRDL+A+N+L+ + KI+DFGLAR
Sbjct: 300 IEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI 334
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 26/157 (16%)
Query: 285 KLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC 342
K+GEG +G VYK G+ A+K RL K E E+ + +L+H N+VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 343 CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDW---------SKRFHIICGTARGVMYL 393
+ +L++E + DQ+ K+LD +K F + G+ Y
Sbjct: 69 IHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYC 116
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
H R++HRDLK N+L++++ KI+DFGLARAF
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAF 150
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 19/157 (12%)
Query: 279 NFSINNKLGEGGFGPV---YKGTLVDGQEIAVK-----RLSKISEQGLKELKNEVILFSK 330
N+ I LGEG FG V Y T GQ++A+K L+K QG ++ E+
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 70
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
L+H +++KL +E +++ E+ N+ D +I +++ + + F I V
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS---AV 126
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
Y H R +I+HRDLK N+LLD+ +N KI+DFGL+
Sbjct: 127 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLS 160
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 19/157 (12%)
Query: 279 NFSINNKLGEGGFGPV---YKGTLVDGQEIAVK-----RLSKISEQGLKELKNEVILFSK 330
N+ I LGEG FG V Y T GQ++A+K L+K QG ++ E+
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 69
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
L+H +++KL +E +++ E+ N+ D +I +++ + + F I V
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS---AV 125
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
Y H R +I+HRDLK N+LLD+ +N KI+DFGL+
Sbjct: 126 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLS 159
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 74 QLYAV-VSEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVE--- 128
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLAR 159
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 26/157 (16%)
Query: 285 KLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC 342
K+GEG +G VYK G+ A+K RL K E E+ + +L+H N+VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 343 CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDW---------SKRFHIICGTARGVMYL 393
+ +L++E + DQ+ K+LD +K F + G+ Y
Sbjct: 69 IHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYC 116
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
H R++HRDLK N+L++++ KI+DFGLARAF
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAF 150
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 16/157 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG G FG V+ T ++AVK + K ++ E + LQH LV
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 240
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCK-----ILDWSKRFHIICGTARGVMY 392
KL + E +I EF+ SL F+ E K ++D+S + A G+ +
Sbjct: 241 KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAF 293
Query: 393 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
+ Q + IHRDL+A+N+L+ + KI+DFGLAR
Sbjct: 294 IEQRN---YIHRDLRAANILVSASLVCKIADFGLARV 327
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 19/157 (12%)
Query: 279 NFSINNKLGEGGFGPV---YKGTLVDGQEIAVK-----RLSKISEQGLKELKNEVILFSK 330
N+ I LGEG FG V Y T GQ++A+K L+K QG ++ E+
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 60
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
L+H +++KL +E +++ E+ N+ D +I +++ + + F I V
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS---AV 116
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
Y H R +I+HRDLK N+LLD+ +N KI+DFGL+
Sbjct: 117 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLS 150
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 26/157 (16%)
Query: 285 KLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC 342
K+GEG +G VYK G+ A+K RL K E E+ + +L+H N+VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 343 CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDW---------SKRFHIICGTARGVMYL 393
+ +L++E + DQ+ K+LD +K F + G+ Y
Sbjct: 69 IHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYC 116
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
H R++HRDLK N+L++++ KI+DFGLARAF
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAF 150
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 25/165 (15%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
DN + +G G +G VYKG+L D + +AVK S + Q KN + ++H N+
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIA 70
Query: 338 KLLGCCIQGEEK---------LLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTAR 388
+ I G+E+ LL+ E+ PN SL ++ DW + R
Sbjct: 71 RF----IVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTR 122
Query: 389 GVMYLHQD------SRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
G+ YLH + + I HRDL + NVL+ D ISDFGL+
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG G FG V+ T ++AVK + K ++ E + LQH LV
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 73
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTARGVMY 392
KL + E +I EF+ SL F+ Q K++D+S + A G+ +
Sbjct: 74 KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAF 126
Query: 393 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ Q + IHRDL+A+N+L+ + KI+DFGLAR
Sbjct: 127 IEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI 161
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLV 243
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ E K L + + A G+ Y+
Sbjct: 244 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 298
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGL R
Sbjct: 299 RMNYVHRDLRAANILVGENLVCKVADFGLGR 329
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 19/157 (12%)
Query: 279 NFSINNKLGEGGFGPV---YKGTLVDGQEIAVK-----RLSKISEQGLKELKNEVILFSK 330
N+ I LGEG FG V Y T GQ++A+K L+K QG ++ E+
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 64
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
L+H +++KL +E +++ E+ N+ D +I +++ + + F I V
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS---AV 120
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
Y H R +I+HRDLK N+LLD+ +N KI+DFGL+
Sbjct: 121 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLS 154
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 282 INNKLGEGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 336
I +G G FG V G L + G+ +A+K L S +E+ ++ +E + + H N+
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
+ L G + ++I EF+ N SLDSF+ ++ + ++ G A G+ YL
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYL--- 151
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 152 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSR 183
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 280 FSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
+ I +LG+G FG VYK + G A K + SE+ L++ E+ + + H +VK
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC-GTARGVMYLHQDS 397
LLG + ++ EF P ++D+ + + +R + ++C + +LH
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHSK- 136
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
RIIHRDLKA NVL+ + + +++DFG++
Sbjct: 137 --RIIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 280 FSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
+ I +LG+G FG VYK + G A K + SE+ L++ E+ + + H +VK
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC-GTARGVMYLHQDS 397
LLG + ++ EF P ++D+ + + +R + ++C + +LH
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHSK- 128
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
RIIHRDLKA NVL+ + + +++DFG++
Sbjct: 129 --RIIHRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAV-KRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 344
LG+G FG K T + E+ V K L + E+ + EV + L+H N++K +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 345 QGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHR 404
+ + I E++ +L I + WS+R A G+ YLH + IIHR
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHS---MNIIHR 132
Query: 405 DLKASNVLLDQDMNPKISDFGLAR 428
DL + N L+ ++ N ++DFGLAR
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLAR 156
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ L F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVMEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 21/170 (12%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV-DG--QEIAVKRLSK-ISEQGLKELKNEVILFSKL-Q 332
++ + +GEG FG V K + DG + A+KR+ + S+ ++ E+ + KL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSL-------------DSFIFDQERCKILDWSKR 379
H N++ LLG C L E+ P+ +L +F L +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
H ARG+ YL Q + IHRDL A N+L+ ++ KI+DFGL+R
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRG 181
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + KLG+G FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ L F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ +HRDL+A+N+L+ +++ K++DFGLAR
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 21/170 (12%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV-DG--QEIAVKRLSK-ISEQGLKELKNEVILFSKL-Q 332
++ + +GEG FG V K + DG + A+KR+ + S+ ++ E+ + KL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSL-------------DSFIFDQERCKILDWSKR 379
H N++ LLG C L E+ P+ +L +F L +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
H ARG+ YL Q + IHRDL A N+L+ ++ KI+DFGL+R
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRG 191
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G FG V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 67
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 68 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 125
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHR+L+A+N+L+ ++ KI+DFGLAR
Sbjct: 126 ---YIHRNLRAANILVSDTLSCKIADFGLAR 153
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 276 ATDNFSINNKLGEGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 328
A + +++ +LG+G FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF----DQERCKIL---DWSKRFH 381
+ ++V+LLG QG+ L+I E + L S++ + E +L SK
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A G+ YL+ + + +HRDL A N + +D KI DFG+ R
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 32 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 48 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 166
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 167 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 46 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 49 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 167
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 168 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 72 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 191 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 38 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 97 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 156
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 157 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQE-----IAVKRLSKISEQGLKE-LKNEVILFSK 330
+N LG G FG V + T G+E +AVK L + KE L +E+ + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 331 L-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR---------- 379
L QH N+V LLG C G L+I E+ L +F+ ++R L++S
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-RRKRPPGLEYSYNPSHNPEEQLS 164
Query: 380 ----FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H A+G+ +L + IHRD+ A NVLL KI DFGLAR
Sbjct: 165 SRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR 214
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 46 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISK 104
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 31 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 31 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
Query: 276 ATDNFSINNKLGEGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 328
A + +++ +LG+G FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-------FDQERCKILDWSKRFH 381
+ ++V+LLG QG+ L+I E + L S++ + SK
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R
Sbjct: 143 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 23 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 82 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 141
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 142 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 58 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 117 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 176
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+AR
Sbjct: 177 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
Query: 276 ATDNFSINNKLGEGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 328
A + +++ +LG+G FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-------FDQERCKILDWSKRFH 381
+ ++V+LLG QG+ L+I E + L S++ + SK
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R
Sbjct: 133 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ I +G+G FG VY G I + + + +E LK K EV+ + + +H N+V
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+G C+ +I ++L S + D + +LD +K I +G+ YLH
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGL 426
I+H+DLK+ NV D + I+DFGL
Sbjct: 151 ---ILHKDLKSKNVFYD-NGKVVITDFGL 175
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 78/157 (49%), Gaps = 25/157 (15%)
Query: 286 LGEGGFG--------PVYKGTLVDGQEIAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 336
LGEG FG P GT G+ +AVK L + Q K E+ + L H ++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 337 VKLLGCCI-QGEEKL-LIYEFVPNKSLDSFIFDQE--RCKILDWSKRFHIICGTARGVMY 392
+K GCC G L L+ E+VP SL ++ ++L ++++ IC G+ Y
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---IC---EGMAY 149
Query: 393 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
LH IHRDL A NVLLD D KI DFGLA+A
Sbjct: 150 LHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 31/178 (17%)
Query: 279 NFSINNKLGEGGFGPVYKGTL--VDGQE----IAVKRLSK-ISEQGLKELKNEVILFSKL 331
N + LGEG FG V K T + G+ +AVK L + S L++L +E + ++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERC-------------KILDWSK 378
H +++KL G C Q LLI E+ SL F+ + + LD
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 379 RFHIICG--------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ G ++G+ YL + ++++HRDL A N+L+ + KISDFGL+R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG G G V+ G ++AVK L + S E L +LQH+ LV
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L Q E +I E++ N SL F+ K L +K + A G+ ++ + +
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL+A+N+L+ ++ KI+DFGLAR
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 284 NKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
++G G FG V+ G ++ ++A+K R +SE+ E + EV++ KL H LV+L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 69
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
C++ L++EF+ + L ++ Q + + G+ YL + S +
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAS---V 124
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K+SDFG+ R
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTR 151
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 31/178 (17%)
Query: 279 NFSINNKLGEGGFGPVYKGTL--VDGQE----IAVKRLSK-ISEQGLKELKNEVILFSKL 331
N + LGEG FG V K T + G+ +AVK L + S L++L +E + ++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERC-------------KILDWSK 378
H +++KL G C Q LLI E+ SL F+ + + LD
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 379 RFHIICG--------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ G ++G+ YL + ++++HRDL A N+L+ + KISDFGL+R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 77/156 (49%), Gaps = 23/156 (14%)
Query: 286 LGEGGFG--------PVYKGTLVDGQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNL 336
LGEG FG P GT G+ +AVK L + L+ + E+ + L H ++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 337 VKLLGCCI-QGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRF-HIICGTARGVMYL 393
VK GCC QGE+ + L+ E+VP SL ++ C L F IC G+ YL
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQIC---EGMAYL 128
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
H IHR L A NVLLD D KI DFGLA+A
Sbjct: 129 HAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKA 161
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 77/156 (49%), Gaps = 23/156 (14%)
Query: 286 LGEGGFG--------PVYKGTLVDGQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNL 336
LGEG FG P GT G+ +AVK L + L+ + E+ + L H ++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 337 VKLLGCCI-QGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRF-HIICGTARGVMYL 393
VK GCC QGE+ + L+ E+VP SL ++ C L F IC G+ YL
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQIC---EGMAYL 127
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
H IHR L A NVLLD D KI DFGLA+A
Sbjct: 128 HAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKA 160
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 286 LGEGGFGPVYKGTLVDGQE----IAVKRLSKISE-QGLKELKNEVILFSKLQHRNLVKLL 340
+G+G FG VY G +D + A+K LS+I+E Q ++ E +L L H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 341 GCCIQGEE-KLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRL 399
G + E ++ ++ + L FI +R + F + ARG+ YL +
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGMEYLAEQ--- 143
Query: 400 RIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ +HRDL A N +LD+ K++DFGLAR
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I E+ +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I E+ +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I E+ +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I E+ +L ++ +D R
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I E+ +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I E+ +L ++ +D R
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 21/170 (12%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV-DG--QEIAVKRLSK-ISEQGLKELKNEVILFSKL-Q 332
++ + +GEG FG V K + DG + A+KR+ + S+ ++ E+ + KL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSL-------------DSFIFDQERCKILDWSKR 379
H N++ LLG C L E+ P+ +L +F L +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
H ARG+ YL Q + IHR+L A N+L+ ++ KI+DFGL+R
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRG 188
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
++ + +LG G FG V+ GT ++A+K L K + E + KL+H LV
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLV 67
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + E ++ E++ SL F+ D E + L + A G+ Y+
Sbjct: 68 QLY-AVVSEEPIYIVTEYMNKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIE--- 122
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
R+ IHRDL+++N+L+ + KI+DFGLAR
Sbjct: 123 RMNYIHRDLRSANILVGNGLICKIADFGLAR 153
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEI-AVKRLS---KISEQGLKELKNEVILFSKLQHRN 335
FS ++G G FG VY V E+ A+K++S K S + +++ EV KL+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
++ GC ++ L+ E+ + D ++ + ++ + H G +G+ YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH---GALQGLAYLHS 172
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ +IHRD+KA N+LL + K+ DFG A
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSA 201
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 330
N ++ LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 32 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD----QERCKILDWSKRFHIICGT 386
H+N+V+ +G +Q + ++ E + L SF+ + + L H+
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLAR 428
A G YL ++ IHRD+ A N LL KI DFG+A+
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 80/150 (53%), Gaps = 14/150 (9%)
Query: 282 INNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
++ ++G G FG VYKG + + ++ + + + +NEV + K +H N++ +G
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQER----CKILDWSKRFHIICGTARGVMYLHQDS 397
+ + ++ ++ SL + QE +++D +++ TA+G+ YLH +
Sbjct: 100 YMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ------TAQGMDYLHAKN 152
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
IIHRD+K++N+ L + + KI DFGLA
Sbjct: 153 ---IIHRDMKSNNIFLHEGLTVKIGDFGLA 179
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 31/178 (17%)
Query: 279 NFSINNKLGEGGFGPVYKGTL--VDGQE----IAVKRLSK-ISEQGLKELKNEVILFSKL 331
N + LGEG FG V K T + G+ +AVK L + S L++L +E + ++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERC-------------KILDWSK 378
H +++KL G C Q LLI E+ SL F+ + + LD
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 379 RFHIICG--------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ G ++G+ YL + + ++HRDL A N+L+ + KISDFGL+R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 19/156 (12%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKE------LKNEVILFSKLQH 333
+ I LGEG FG V T Q+ L IS Q LK+ ++ E+ L+H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVA--LKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRF--HIICGTARGVM 391
+++KL + +++ E+ + D +I +++R D +RF IIC +
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYAGGELFD-YIVEKKRMT-EDEGRRFFQQIICA----IE 122
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
Y H R +I+HRDLK N+LLD ++N KI+DFGL+
Sbjct: 123 YCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEI-AVKRLS---KISEQGLKELKNEVILFSKLQHRN 335
FS ++G G FG VY V E+ A+K++S K S + +++ EV KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
++ GC ++ L+ E+ + D ++ + ++ + H G +G+ YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH---GALQGLAYLHS 133
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ +IHRD+KA N+LL + K+ DFG A
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSA 162
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD--------GQEIAVKRL-SKISEQGLKELKNEVILF 328
D + LGEG FG V + ++AVK L S +E+ L +L +E+ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I E+ +L ++ F+
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
S + + C ARG+ YL + + IHRDL A NVL+ +D KI+DFGLAR
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 280 FSINNKLGEGGFGPVYKGTL-VDGQE---IAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
I +G G FG V G L + G+ +A+K L +E+ ++ E + + H
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHP 104
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+V L G +G+ +++ EF+ N +LD+F+ + + ++ G A G+ YL
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD--GQFTVIQLVGMLRGIAAGMRYL- 161
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 162 --ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI 195
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Query: 282 INNKLGEGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 336
I +G G FG V G L + G+ +A+K L S +E+ ++ +E + + H N+
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
+ L G + ++I EF+ N SLDSF+ ++ + ++ G A G+ YL
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYL--- 125
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + +HR L A N+L++ ++ K+SDFGL+R
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSR 157
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 286 LGEGGFGPVY------KGTLVDGQEIAVKRLSKISE-QGLKELKNEVILFSKLQHRNLVK 338
LGEG FG V +G G+++AVK L S + +LK E+ + L H N+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNT-GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 339 LLGCCIQ--GEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
G C + G LI EF+P+ SL ++ + + KI + ++ +G+ YL
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKI-NLKQQLKYAVQICKGMDYL--G 143
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
SR + +HRDL A NVL++ + KI DFGL +A
Sbjct: 144 SR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I E+ +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + + IHRDL A NVL+ ++ +I+DFGLAR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 28/175 (16%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD--------GQEIAVKRL-SKISEQGLKELKNEVILF 328
D + LGEG FG V + ++AVK L S +E+ L +L +E+ +
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWS---------- 377
+ +H+N++ LLG C Q +I E+ +L ++ R L++S
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQ 187
Query: 378 --KRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + C ARG+ YL + + IHRDL A NVL+ +D KI+DFGLAR
Sbjct: 188 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 28/175 (16%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD--------GQEIAVKRL-SKISEQGLKELKNEVILF 328
D + LGEG FG V + ++AVK L S +E+ L +L +E+ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDW----------- 376
+ +H+N++ LLG C Q +I E+ +L ++ R L++
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYCYNPSHNPEEQ 146
Query: 377 -SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
S + + C ARG+ YL + + IHRDL A NVL+ +D KI+DFGLAR
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G FG VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ ++ + + YL + +
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKN 129
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 130 ---FIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 286 LGEGGFGPVY------KGTLVDGQEIAVKRLSKISE-QGLKELKNEVILFSKLQHRNLVK 338
LGEG FG V +G G+++AVK L S + +LK E+ + L H N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNT-GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 339 LLGCCIQ--GEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
G C + G LI EF+P+ SL ++ + + KI + ++ +G+ YL
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKI-NLKQQLKYAVQICKGMDYL--G 131
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
SR + +HRDL A NVL++ + KI DFGL +A
Sbjct: 132 SR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 164
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD--------GQEIAVKRL-SKISEQGLKELKNEVILF 328
D + LGEG FG V + ++AVK L S +E+ L +L +E+ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKIL-----------DW 376
+ +H+N++ LLG C Q +I E+ +L ++ +E +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
S + + C ARG+ YL + + IHRDL A NVL+ +D KI+DFGLAR
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 136
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 28/175 (16%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD--------GQEIAVKRL-SKISEQGLKELKNEVILF 328
D + LGEG FG V + ++AVK L S +E+ L +L +E+ +
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWS---------- 377
+ +H+N++ LLG C Q +I E+ +L ++ R L++S
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQ 138
Query: 378 --KRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + C ARG+ YL + + IHRDL A NVL+ +D KI+DFGLAR
Sbjct: 139 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 28/175 (16%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD--------GQEIAVKRL-SKISEQGLKELKNEVILF 328
D + LGEG FG V + ++AVK L S +E+ L +L +E+ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWS---------- 377
+ +H+N++ LLG C Q +I E+ +L ++ R L++S
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQ 146
Query: 378 --KRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + C ARG+ YL + + IHRDL A NVL+ +D KI+DFGLAR
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 28/175 (16%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD--------GQEIAVKRL-SKISEQGLKELKNEVILF 328
D + LGEG FG V + ++AVK L S +E+ L +L +E+ +
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWS---------- 377
+ +H+N++ LLG C Q +I E+ +L ++ R L++S
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQ 139
Query: 378 --KRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + C ARG+ YL + + IHRDL A NVL+ +D KI+DFGLAR
Sbjct: 140 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 284 NKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
++G G FG V+ G ++ ++A+K R +SE+ E + EV++ KL H LV+L G
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 72
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
C++ L++EF+ + L ++ Q + + G+ YL + +
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---V 127
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K+SDFG+ R
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTR 154
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 3 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 62 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYL 120
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 121 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I E+ +L ++ +D R
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR
Sbjct: 147 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 136
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 28/175 (16%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD--------GQEIAVKRL-SKISEQGLKELKNEVILF 328
D + LGEG FG V + ++AVK L S +E+ L +L +E+ +
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWS---------- 377
+ +H+N++ LLG C Q +I E+ +L ++ R L++S
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQ 135
Query: 378 --KRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + C ARG+ YL + + IHRDL A NVL+ +D KI+DFGLAR
Sbjct: 136 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 136
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I E+ +L ++ +D R
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + IHRDL A NVL+ ++ KI+DFGLAR
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 76
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 135
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 136 ---FIHRDLAARNCLVGENHLVKVADFGLSR 163
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 28/175 (16%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD--------GQEIAVKRL-SKISEQGLKELKNEVILF 328
D + LGEG FG V + ++AVK L S +E+ L +L +E+ +
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDW----------- 376
+ +H+N++ LLG C Q +I E+ +L ++ R L++
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYCYNPSHNPEEQ 131
Query: 377 -SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
S + + C ARG+ YL + + IHRDL A NVL+ +D KI+DFGLAR
Sbjct: 132 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 284 NKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
++G G FG V+ G ++ ++A+K R +SE+ E + EV++ KL H LV+L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 69
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
C++ L++EF+ + L ++ Q + + G+ YL + +
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---V 124
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K+SDFG+ R
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTR 151
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 279 NFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLK---ELKNEVILFSKLQHR 334
++ + + LG G FG V G + G ++AVK L++ + L ++K E+ +H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
+++KL + ++ E+V L +I R + ++ + F I V Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS---AVDYCH 128
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
R ++HRDLK NVLLD MN KI+DFGL+
Sbjct: 129 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I E+ +L ++ +D R
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR
Sbjct: 142 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I E+ +L ++ +D R
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR
Sbjct: 144 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 279 NFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLK---ELKNEVILFSKLQHR 334
++ + + LG G FG V G + G ++AVK L++ + L ++K E+ +H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
+++KL + ++ E+V L +I R + ++ + F I V Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA---VDYCH 128
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
R ++HRDLK NVLLD MN KI+DFGL+
Sbjct: 129 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 284 NKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
++G G FG V+ G ++ ++A+K R +SE+ E + EV++ KL H LV+L G
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 67
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
C++ L++EF+ + L ++ Q + + G+ YL + +
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---V 122
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K+SDFG+ R
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTR 149
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYL 119
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 120 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 287 GEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQG 346
G FG V+K L++ + +AVK +Q + + EV ++H N+++ +G +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRG 90
Query: 347 E----EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD------ 396
+ LI F SL F+ + ++ W++ HI ARG+ YLH+D
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 397 -SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K+ NVLL ++ I+DFGLA F
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 132
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 133 ---FIHRDLAARNCLVGENHLVKVADFGLSR 160
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 6 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 64
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 65 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 123
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 124 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 169
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 132
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 133 ---FIHRDLAARNCLVGENHLVKVADFGLSR 160
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 120 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 122 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 3 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 62 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 120
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 121 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 136
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 133
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 134 ---FIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 133
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 134 ---FIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 8 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 66
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 67 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 125
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 126 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 171
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 5 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 122
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 123 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 122 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 85
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 144
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 145 ---FIHRDLAARNCLVGENHLVKVADFGLSR 172
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK-NE 324
L + ++ + ++ K+G+G G VY + GQE+A+++++ + +Q KEL NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 67
Query: 325 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
+++ + ++ N+V L + G+E ++ E++ SL + E C +D + +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCR 123
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+ + +LH + ++IHRD+K+ N+LL D + K++DFG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG 161
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY G +AVK L + + + ++E E + +++H NLV
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 91
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C ++ E++P +L ++ + R ++ ++ + + YL + +
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA-VVLLYMATQISSAMEYLEKKN 150
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 151 ---FIHRDLAARNCLVGENHVVKVADFGLSR 178
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 133
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 134 ---FIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK-NE 324
L + ++ + ++ K+G+G G VY + GQE+A+++++ + +Q KEL NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 67
Query: 325 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
+++ + ++ N+V L + G+E ++ E++ SL + E C +D + +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCR 123
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+ + +LH + ++IHRD+K+ N+LL D + K++DFG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG 161
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 5 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 122
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 123 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 5 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 122
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 123 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 5 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 122
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 123 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 12 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 70
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 71 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 129
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 130 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 175
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 9 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 126
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 127 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 120 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 27 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 85
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 86 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 144
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 145 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 190
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 20/153 (13%)
Query: 286 LGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 339
LG G FG VYKG + E +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 340 LGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKILDWSKRFHIICGTARGVMYLHQ 395
LG C+ +L I + +P L ++ + + +L+W + A+G+ YL +
Sbjct: 77 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL-E 128
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 129 DRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 159
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ ++ + + YL + +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKN 136
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK-NE 324
L + ++ + ++ K+G+G G VY + GQE+A+++++ + +Q KEL NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 67
Query: 325 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
+++ + ++ N+V L + G+E ++ E++ SL + E C +D + +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCR 123
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+ + +LH + ++IHRD+K+ N+LL D + K++DFG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG 161
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ ++ + + YL + +
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKN 129
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 130 ---FIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 120 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 279 NFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLK---ELKNEVILFSKLQHR 334
++ + + LG G FG V G + G ++AVK L++ + L +++ E+ +H
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
+++KL + ++ E+V L +I R LD + + GV Y H
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCH 133
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
R ++HRDLK NVLLD MN KI+DFGL+
Sbjct: 134 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLS 163
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ ++ + + YL + +
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKN 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 84/157 (53%), Gaps = 12/157 (7%)
Query: 280 FSINNKLGEGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHR 334
I +G G FG V G L V G+ +A+K L + +++ ++ +E + + H
Sbjct: 31 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 90
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE-RCKILDWSKRFHIICGTARGVMYL 393
N++ L G + + ++I E++ N SLD+F+ + R ++ + ++ G G+ YL
Sbjct: 91 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYL 147
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
S + +HRDL A N+L++ ++ K+SDFG++R
Sbjct: 148 ---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL 181
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK-NE 324
L + ++ + ++ K+G+G G VY + GQE+A+++++ + +Q KEL NE
Sbjct: 10 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 68
Query: 325 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
+++ + ++ N+V L + G+E ++ E++ SL + E C +D + +
Sbjct: 69 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCR 124
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+ + +LH + ++IHRD+K+ N+LL D + K++DFG
Sbjct: 125 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG 162
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ ++ + + YL + +
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKN 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ ++ + + YL + +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKN 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 259 QNMDLELP-LFELATIANATDNFSINNKLGEGGFGPVYK-GTLVDGQEIAVKRLSK--IS 314
+N+ + P +F + A +D + LG+G FG V + GQE AVK +SK +
Sbjct: 12 ENLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK 71
Query: 315 EQGLKE-LKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKI 373
++ KE L EV L +L H N++KL L+ E L I ++R
Sbjct: 72 QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 131
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF 430
+D ++ II G+ Y+H++ +I+HRDLK N+LL+ +D N +I DFGL+ F
Sbjct: 132 VDAAR---IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 185
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKI----SEQGLKELKNEVILFSK 330
N D + I +LG+ FG VYK +E +V +K+ SE+ L++ E+ + +
Sbjct: 9 NPEDFWEIIGELGD--FGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 63
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICG-TARG 389
H N+VKLL ++ EF ++D+ + + ER + ++C T
Sbjct: 64 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDA 120
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ YLH + +IIHRDLKA N+L D + K++DFG++
Sbjct: 121 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ ++ + + YL + +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKN 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I + +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 280 FSINNKLGEGGFGPVYKGTL-VDGQE---IAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+I +G G FG V G L + G+ +A+K L +E+ ++ E + + H
Sbjct: 24 ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 83
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N++ L G + + +++ E++ N SLD+F+ ++ + ++ G + G+ YL
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQLVGMLRGISAGMKYL- 140
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
S + +HRDL A N+L++ ++ K+SDFGL+R
Sbjct: 141 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 174
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ ++ + + YL + +
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKN 129
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K++DFGL+R
Sbjct: 130 ---FIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 84/157 (53%), Gaps = 12/157 (7%)
Query: 280 FSINNKLGEGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHR 334
I +G G FG V G L V G+ +A+K L + +++ ++ +E + + H
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE-RCKILDWSKRFHIICGTARGVMYL 393
N++ L G + + ++I E++ N SLD+F+ + R ++ + ++ G G+ YL
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYL 132
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
S + +HRDL A N+L++ ++ K+SDFG++R
Sbjct: 133 ---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL 166
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 84/157 (53%), Gaps = 12/157 (7%)
Query: 280 FSINNKLGEGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHR 334
I +G G FG V G L V G+ +A+K L + +++ ++ +E + + H
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE-RCKILDWSKRFHIICGTARGVMYL 393
N++ L G + + ++I E++ N SLD+F+ + R ++ + ++ G G+ YL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYL 126
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
S + +HRDL A N+L++ ++ K+SDFG++R
Sbjct: 127 ---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL 160
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 278 DNFSINNKLGEGGFGPVY--KGTLVDGQEIAVKRL---SKISEQGLKELKNEVILFSKLQ 332
+ + I +KLG GG VY + T+++ + +A+K + + E+ LK + EV S+L
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 392
H+N+V ++ + + L+ E++ +L +I E L + G+ +
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKH 126
Query: 393 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
H +RI+HRD+K N+L+D + KI DFG+A+A
Sbjct: 127 AHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 274 ANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 331
A +++ + LGEG +G V V + +AVK + K + + +K E+ + L
Sbjct: 1 APFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
H N+VK G +G + L E+ L I D + FH + GV+
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 117
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
YLH + I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 118 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 153
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 12/150 (8%)
Query: 284 NKLGEGGFGPVYKGT--LVDGQEIAVKRLSKISEQGLK-ELKNEVILFSKLQHRNLVKLL 340
+KLGEG + VYKG L D +A+K + E+G EV L L+H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERC-KILDWSKRFHIICGTARGVMYLHQDSRL 399
+ L++E++ +K L ++ D C I++ + RG+ Y H R
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCH---RQ 119
Query: 400 RIIHRDLKASNVLLDQDMNPKISDFGLARA 429
+++HRDLK N+L+++ K++DFGLARA
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARA 149
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 13/171 (7%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYK-GTLVDGQEIAVKRLSK--ISEQGLKE-LK 322
+F + A +D + LG+G FG V + GQE AVK +SK + ++ KE L
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 323 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHI 382
EV L +L H N++KL L+ E L I ++R +D ++ I
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---I 131
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF 430
I G+ Y+H++ +I+HRDLK N+LL+ +D N +I DFGL+ F
Sbjct: 132 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 20/155 (12%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLS---------KISEQGLKELKNEVILFSKLQHRN 335
LGEG F VYK + Q +A+K++ I+ L+E+K L +L H N
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK----LLQELSHPN 73
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
++ LL L+++F+ L+ I D K + ++ T +G+ YLHQ
Sbjct: 74 IIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQ 130
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
I+HRDLK +N+LLD++ K++DFGLA++F
Sbjct: 131 HW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF 162
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 13/171 (7%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYK-GTLVDGQEIAVKRLSK--ISEQGLKE-LK 322
+F + A +D + LG+G FG V + GQE AVK +SK + ++ KE L
Sbjct: 38 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 323 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHI 382
EV L +L H N++KL L+ E L I ++R +D ++ I
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---I 154
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF 430
I G+ Y+H++ +I+HRDLK N+LL+ +D N +I DFGL+ F
Sbjct: 155 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 202
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV--------DGQEIAVKRLSK-ISEQGLKELKNEVILF 328
D ++ LGEG FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----------FDQERCKILDW 376
+ +H+N++ LLG C Q +I + +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 377 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 13/171 (7%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYK-GTLVDGQEIAVKRLSK--ISEQGLKE-LK 322
+F + A +D + LG+G FG V + GQE AVK +SK + ++ KE L
Sbjct: 39 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 323 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHI 382
EV L +L H N++KL L+ E L I ++R +D ++ I
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---I 155
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF 430
I G+ Y+H++ +I+HRDLK N+LL+ +D N +I DFGL+ F
Sbjct: 156 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 20/153 (13%)
Query: 286 LGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 339
LG G FG VYKG + E +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 340 LGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKILDWSKRFHIICGTARGVMYLHQ 395
LG C+ +L I + +P L ++ + + +L+W + A G+ YL +
Sbjct: 80 LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEGMNYL-E 131
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 132 DRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 162
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG +G V V + +AVK + K + + +K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 284 NKLGEGGFGPVYKGTLVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRNLVKLLG 341
++G G FG V+ G ++ ++A+K + + +SE E + EV++ KL H LV+L G
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE-EAEVMM--KLSHPKLVQLYG 89
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
C++ L++EF+ + L ++ Q + + G+ YL + +
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ ++ K+SDFG+ R
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTR 171
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNL 336
+ ++G G FG V+ G ++ ++A+K R +SE+ E + EV++ KL H L
Sbjct: 9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKL 65
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
V+L G C++ L+ EF+ + L ++ Q + + G+ YL +
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+IHRDL A N L+ ++ K+SDFG+ R
Sbjct: 124 C---VIHRDLAARNCLVGENQVIKVSDFGMTR 152
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +LG G FG V G ++AVK + + S E E KL H LV
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLV 66
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
K G C + ++ E++ N L +++ + K L+ S+ + G+ +L
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLESH- 123
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ IHRDL A N L+D+D+ K+SDFG+ R
Sbjct: 124 --QFIHRDLAARNCLVDRDLCVKVSDFGMTR 152
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 268 FELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVIL 327
+L+ + + F + +G G +G VYKG V ++A ++ ++ +E+K E+ +
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINM 73
Query: 328 FSKL-QHRNLVKLLGCCIQG------EEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
K HRN+ G I+ ++ L+ EF S+ I + + L
Sbjct: 74 LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIA 132
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+I RG+ +LHQ ++IHRD+K NVLL ++ K+ DFG++
Sbjct: 133 YICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 176
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 157
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 18/152 (11%)
Query: 286 LGEGGFGPVYKGTLV-DGQEIAVKRLSKI-----SEQGLKELKNEVILFSKLQHRNLVKL 339
LG G FG VYKG + DG+ + + K+ S + KE+ +E + + + + +L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 340 LGCCIQGEEKLLIYEFVPNKSLDSFIFDQERC---KILDWSKRFHIICGTARGVMYLHQD 396
LG C+ +L+ LD ++ R +L+W + A+G+ YL
Sbjct: 85 LGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYLED- 137
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+R++HRDL A NVL+ + KI+DFGLAR
Sbjct: 138 --VRLVHRDLAARNVLVKSPNHVKITDFGLAR 167
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 170
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 278 DNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 335
++ + ++G G FG V+ G L D +AVK + LK + E + + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+V+L+G C Q + ++ E V + D F + L ++ A G+ YL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ + KISDFG++R
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 278 DNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 335
++ + ++G G FG V+ G L D +AVK + LK + E + + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+V+L+G C Q + ++ E V + D F + L ++ A G+ YL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHRDL A N L+ + KISDFG++R
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 152
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 13/159 (8%)
Query: 278 DNFSINN-KLGEGGFGPVYKGTLVDGQ---EIAVKRLSKISEQG-LKELKNEVILFSKLQ 332
DN I + +LG G FG V +G + ++A+K L + +E+ +E+ E + +L
Sbjct: 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD 68
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF-DQERCKILDWSKRFHIICGTARGVM 391
+ +V+L+G C Q E +L+ E L F+ +E + + ++ H + + G+
Sbjct: 69 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV---SMGMK 124
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
YL + + +HRDL A NVLL KISDFGL++A
Sbjct: 125 YLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 31/179 (17%)
Query: 278 DNFSINNKLGEGGFGPVYKGT---LVDGQE---IAVKRLSKISEQGLK-ELKNEVILFSK 330
+N +GEG FG V++ L+ + +AVK L + + ++ + + E L ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE--------------RCKI--- 373
+ N+VKLLG C G+ L++E++ L+ F+ R ++
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 374 ----LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +++ I A G+ YL S + +HRDL N L+ ++M KI+DFGL+R
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 276
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 335
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHR+L A N L+ ++ K++DFGL+R
Sbjct: 336 ---FIHRNLAARNCLVGENHLVKVADFGLSR 363
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F L G FG VYKG + E +A+K L + S +
Sbjct: 9 EAPNQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 126
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 127 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 279
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ ++ + + YL + +
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKN 338
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHR+L A N L+ ++ K++DFGL+R
Sbjct: 339 ---FIHRNLAARNCLVGENHLVKVADFGLSR 366
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 275 NATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS---KISEQGLKELKNEVILFSK 330
N NF I K+G G F VY+ L+DG +A+K++ + + + E+ L +
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI--FDQERCKILDWS--KRFHIICGT 386
L H N++K I+ E ++ E L I F +++ I + + K F +C
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
H SR R++HRD+K +NV + K+ D GL R F
Sbjct: 149 LE-----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 21/193 (10%)
Query: 246 LEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE- 304
L + RE + E P L I T+ F LG G FG VYKG + E
Sbjct: 18 LRRLLQERELVEPLTPSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEK 76
Query: 305 ----IAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNK 359
+A+ L + S + KE+ +E + + + + ++ +LLG C+ +L I + +P
Sbjct: 77 VKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFG 135
Query: 360 SLDSFIFDQE----RCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ 415
L ++ + + +L+W + A+G+ YL +D RL +HRDL A NVL+
Sbjct: 136 CLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKT 186
Query: 416 DMNPKISDFGLAR 428
+ KI+DFGLA+
Sbjct: 187 PQHVKITDFGLAK 199
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ ++ +KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 318
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+LLG C + +I EF+ +L ++ + R ++ + ++ + + YL + +
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 377
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IHR+L A N L+ ++ K++DFGL+R
Sbjct: 378 ---FIHRNLAARNCLVGENHLVKVADFGLSR 405
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F L G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 120 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFG A+
Sbjct: 122 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFG A+
Sbjct: 122 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 88/158 (55%), Gaps = 10/158 (6%)
Query: 270 LATIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK-NEVIL 327
+ ++ + ++ K+G+G G VY + GQE+A+++++ + +Q KEL NE+++
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINEILV 71
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
+ ++ N+V L + G+E ++ E++ SL + E C +D + +
Sbjct: 72 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCRECL 127
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+ + +LH + ++IHR++K+ N+LL D + K++DFG
Sbjct: 128 QALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFG 162
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F L G FG VYKG + E +A+K L + S +
Sbjct: 9 EAPNQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 126
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+
Sbjct: 127 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFG A+
Sbjct: 122 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 9 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 126
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFG A+
Sbjct: 127 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAK 172
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 20/153 (13%)
Query: 286 LGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 339
LG G FG VYKG + E +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 340 LGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKILDWSKRFHIICGTARGVMYLHQ 395
LG C+ +L I + +P L ++ + + +L+W + A+G+ YL +
Sbjct: 87 LGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL-E 138
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
D RL +HRDL A NVL+ + KI+DFG A+
Sbjct: 139 DRRL--VHRDLAARNVLVKTPQHVKITDFGRAK 169
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 150
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 21/175 (12%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 317
E P L I T+ F LG G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQE----RCKI 373
KE+ +E + + + + ++ +LLG C+ +L I + +P L ++ + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 374 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFG A+
Sbjct: 120 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAK 165
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKLQH 333
++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
N+++L G LI E+ P L + + ++ D + I A + Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
H R+IHRD+K N+LL + KI+DFG
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 277 TDNFSINNKLGEGGFGPVYK-GTLVDGQEIAVKRLSKISEQG--LKELKNEVILFSKLQH 333
+ ++I LG+G FG V K + QE AVK ++K S + + EV L KL H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
N++KL ++ E L I ++R D ++ II G+ Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYM 137
Query: 394 HQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAF 430
H+ + I+HRDLK N+LL ++D + KI DFGL+ F
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 76/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL C Q +EKL + N L +I FD E C RF+
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 147
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 148 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 187
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 277 TDNFSINNKLGEGGFGPVYK-GTLVDGQEIAVKRLSKISEQG--LKELKNEVILFSKLQH 333
+ ++I LG+G FG V K + QE AVK ++K S + + EV L KL H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
N++KL ++ E L I ++R D ++ II G+ Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYM 137
Query: 394 HQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAF 430
H+ + I+HRDLK N+LL ++D + KI DFGL+ F
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKLQH 333
++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
N+++L G LI E+ P L + + ++ D + I A + Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
H R+IHRD+K N+LL + KI+DFG
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 277 TDNFSINNKLGEGGFGPVYK-GTLVDGQEIAVKRLSKISEQG--LKELKNEVILFSKLQH 333
+ ++I LG+G FG V K + QE AVK ++K S + + EV L KL H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
N++KL ++ E L I ++R D ++ II G+ Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYM 137
Query: 394 HQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAF 430
H+ + I+HRDLK N+LL ++D + KI DFGL+ F
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 286 LGEGGFGPVYKG-TLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 342
+G G G V V G +AVK+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 343 CIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTARGV 390
F P K+L+ F + D C++ LD + +++ G+
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGI 139
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
+LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H ++IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHR 334
+++ + LGEG G V V + +AVK + K + + +K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
N+VK G +G + L E+ L I D + FH + GV+YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD+K N+LLD+ N KISDFGLA F
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 13/159 (8%)
Query: 278 DNFSINN-KLGEGGFGPVYKGTLVDGQ---EIAVKRLSKISEQG-LKELKNEVILFSKLQ 332
DN I + +LG G FG V +G + ++A+K L + +E+ +E+ E + +L
Sbjct: 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD 394
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF-DQERCKILDWSKRFHIICGTARGVM 391
+ +V+L+G C Q E +L+ E L F+ +E + + ++ H + + G+
Sbjct: 395 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV---SMGMK 450
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
YL + + +HR+L A NVLL KISDFGL++A
Sbjct: 451 YLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKAL 486
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI++FG
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG 155
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D C++ LD + +++
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART 175
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 30/158 (18%)
Query: 286 LGEGGFGPVYKG-TLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 342
+G G G V V G +AVK+LS+ ++ K E++L + H+N++ LL
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 343 CIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTARGV 390
F P K+L+ F + D C++ LD + +++ G+
Sbjct: 90 ------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGI 137
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P + + ++ D + I A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYK---ELQKLSKFDEQRTATYITELANALS 127
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 25/161 (15%)
Query: 285 KLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQ------GLKELKNEVILFSKLQHRNLV 337
K+G+G FG V+K GQ++A+K++ +E+ L+E+K + L+H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 338 KLLGCCIQGEEKL--------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
L+ C L+++F + L + + L KR ++ G
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNG 137
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ Y+H++ +I+HRD+KA+NVL+ +D K++DFGLARAF
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 286 LGEGGFGPVYKGTLV-DGQEIAVKRLSKISE-----QGLKELKNEVILFSKLQHRNLVKL 339
LG G FG V+KG + +G+ I + K+ E Q + + + ++ L H ++V+L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 340 LGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKI-----LDWSKRFHIICGTARGVMYLH 394
LG C G L+ +++P SL + Q R + L+W + A+G+ YL
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQI------AKGMYYLE 132
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ ++HR+L A NVLL +++DFG+A
Sbjct: 133 EHG---MVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P L + + ++ D + I A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI++FG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG 156
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 336
DNF K+GEG G V T+ G+ +AVK++ +Q + L NEV++ QH N+
Sbjct: 27 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
V++ + G+E ++ EF+ +L + ++ + + + + LH
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 139
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+IHRD+K+ ++LL D K+SDFG
Sbjct: 140 G---VIHRDIKSDSILLTHDGRVKLSDFG 165
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 336
DNF K+GEG G V T+ G+ +AVK++ +Q + L NEV++ QH N+
Sbjct: 34 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
V++ + G+E ++ EF+ +L + ++ + + + + LH
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 146
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+IHRD+K+ ++LL D K+SDFG
Sbjct: 147 G---VIHRDIKSDSILLTHDGRVKLSDFG 172
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 336
DNF K+GEG G V T+ G+ +AVK++ +Q + L NEV++ QH N+
Sbjct: 23 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
V++ + G+E ++ EF+ +L + ++ + + + + LH
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 135
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+IHRD+K+ ++LL D K+SDFG
Sbjct: 136 G---VIHRDIKSDSILLTHDGRVKLSDFG 161
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 331
A ++F I LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+++L G LI E+ P + + ++ D + I A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYK---ELQKLSKFDEQRTATYITELANALS 127
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISE-----QGLKELKNEVILFSKLQHRNLVKL 339
LG G FG V+KG + +G+ I + K+ E Q + + + ++ L H ++V+L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 340 LGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKI-----LDWSKRFHIICGTARGVMYLH 394
LG C G L+ +++P SL + Q R + L+W + A+G+ YL
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQI------AKGMYYLE 150
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ ++HR+L A NVLL +++DFG+A
Sbjct: 151 EHG---MVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 336
DNF K+GEG G V T+ G+ +AVK++ +Q + L NEV++ QH N+
Sbjct: 32 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
V++ + G+E ++ EF+ +L + ++ + + + + LH
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 144
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+IHRD+K+ ++LL D K+SDFG
Sbjct: 145 G---VIHRDIKSDSILLTHDGRVKLSDFG 170
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 286 LGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQH----------- 333
LG+G FG V K +D + A+K++ + +E+ L + +EV+L + L H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 334 --RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
RN VK + + + E+ N++L I + + D + + + +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD--EYWRLFRQILEALS 130
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
Y+H IIHRDLK N+ +D+ N KI DFGLA+
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 11/149 (7%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKR-LSKISEQGLKELK-NEVILFSKLQHRNLVKLLGC 342
+GEG +G V K D G+ +A+K+ L ++ +K++ E+ L +L+H NLV LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 343 CIQGEEKLLIYEFVPNKSLDSF-IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
C + + L++EFV + LD +F LD+ + G+ + H + I
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNG----LDYQVVQKYLFQIINGIGFCHSHN---I 145
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLARAF 430
IHRD+K N+L+ Q K+ DFG AR
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTL 174
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 25/161 (15%)
Query: 285 KLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQ------GLKELKNEVILFSKLQHRNLV 337
K+G+G FG V+K GQ++A+K++ +E+ L+E+K + L+H N+V
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 79
Query: 338 KLLGCCIQGEEKL--------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
L+ C L+++F + L + + L KR ++ G
Sbjct: 80 NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNG 136
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ Y+H++ +I+HRD+KA+NVL+ +D K++DFGLARAF
Sbjct: 137 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 174
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 336
DNF K+GEG G V T+ G+ +AVK++ +Q + L NEV++ QH N+
Sbjct: 77 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
V++ + G+E ++ EF+ +L + ++ + + + + LH
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 189
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+IHRD+K+ ++LL D K+SDFG
Sbjct: 190 G---VIHRDIKSDSILLTHDGRVKLSDFG 215
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 336
DNF K+GEG G V T+ G+ +AVK++ +Q + L NEV++ QH N+
Sbjct: 154 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
V++ + G+E ++ EF+ +L + ++ + + + + LH
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 266
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+IHRD+K+ ++LL D K+SDFG
Sbjct: 267 G---VIHRDIKSDSILLTHDGRVKLSDFG 292
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 25/161 (15%)
Query: 285 KLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQ------GLKELKNEVILFSKLQHRNLV 337
K+G+G FG V+K GQ++A+K++ +E+ L+E+K + L+H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 338 KLLGCCIQGEEKL--------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
L+ C L+++F + L + + L KR ++ G
Sbjct: 81 NLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNG 137
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ Y+H++ +I+HRD+KA+NVL+ +D K++DFGLARAF
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 25/161 (15%)
Query: 285 KLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQ------GLKELKNEVILFSKLQHRNLV 337
K+G+G FG V+K GQ++A+K++ +E+ L+E+K + L+H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 338 KLLGCCIQGEEKL--------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
L+ C L+++F + L + + L KR ++ G
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNG 137
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ Y+H++ +I+HRD+KA+NVL+ +D K++DFGLARAF
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 13/170 (7%)
Query: 268 FELATIANATDNFSINNKLGEGGFGPVYK-GTLVDGQEIAVKRLSK--ISEQGLKE-LKN 323
F + A +D + LG+G FG V + GQE AVK +SK + ++ KE L
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 324 EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHII 383
EV L +L H N+ KL L+ E L I ++R +D ++ II
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---II 132
Query: 384 CGTARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF 430
G+ Y H++ +I+HRDLK N+LL+ +D N +I DFGL+ F
Sbjct: 133 RQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 285 KLGEGGFGPV-YKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 343
K+GEG G V G+++AVK + +Q + L NEV++ QH N+V++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC-GTARGVMYLHQDSRLRII 402
+ GEE ++ EF+ +L I Q R ++ +C + + YLH +I
Sbjct: 112 LVGEELWVLMEFLQGGALTD-IVSQVRLN----EEQIATVCEAVLQALAYLHAQG---VI 163
Query: 403 HRDLKASNVLLDQDMNPKISDFG 425
HRD+K+ ++LL D K+SDFG
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFG 186
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 285 KLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 343
K+GEG G V T G+++AVK++ +Q + L NEV++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ G+E ++ EF+ +L + ++ + + R + YLH +IH
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 404 RDLKASNVLLDQDMNPKISDFG 425
RD+K+ ++LL D K+SDFG
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFG 186
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D ++ LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFIFDQ--ERCKILDWSKRF----HI 382
H N+V LLG C + G ++I EF +L +++ + E D K F H+
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 383 IC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IC A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 147 ICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 87/159 (54%), Gaps = 18/159 (11%)
Query: 280 FSINNKLGEGGFGPVYKGTLVD---GQEIAVKRLSKISEQGLKELKN--EVILFSKLQ-H 333
+ + KLG+G +G V+K +D G+ +AVK++ + + E+++ ++L H
Sbjct: 11 YELVKKLGKGAYGIVWKS--IDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH 68
Query: 334 RNLVKLLGCCIQGEEK--LLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
N+V LL ++ L+++++ L + I R IL+ + +++ + +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVI----RANILEPVHKQYVVYQLIKVIK 123
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
YLH ++HRD+K SN+LL+ + + K++DFGL+R+F
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSF 159
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V V G +IAVK+LS+ + + K E+ L
Sbjct: 45 TIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLL 104
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P SL+ F + + +C+ L
Sbjct: 105 KHMKHENVIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLT 152
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 153 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+ +G G FG V K +++A+K++ SE+ K E+ S++ H N+VKL
Sbjct: 10 IEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKL 66
Query: 340 LGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRL 399
G C+ L+ E+ SL + + E + ++GV YLH
Sbjct: 67 YGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 400 RIIHRDLKASNVLLDQDMNP-KISDFGLA 427
+IHRDLK N+LL KI DFG A
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
+ +G G FG V K +++A+K++ SE+ K E+ S++ H N+VKL
Sbjct: 11 IEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKL 67
Query: 340 LGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRL 399
G C+ L+ E+ SL + + E + ++GV YLH
Sbjct: 68 YGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 400 RIIHRDLKASNVLLDQDMNP-KISDFGLA 427
+IHRDLK N+LL KI DFG A
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D C++ LD + +++
Sbjct: 128 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 175
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 213
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 286 LGEGGFGPVYKGTLVDGQEI----AVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
LG+GGF Y+ T +D +E+ V + + +++ E+ + L + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
+ ++ E +SL +R K + + + + T +GV YLH + R+
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 147
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLA 427
IHRDLK N+ L+ DM+ KI DFGLA
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 286 LGEGGFGPVYKGTLVDGQEI----AVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
LG+GGF Y+ T +D +E+ V + + +++ E+ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
+ ++ E +SL +R K + + + + T +GV YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLA 427
IHRDLK N+ L+ DM+ KI DFGLA
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 286 LGEGGFGPVYKGTLV--DGQ--EIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKL 339
LGEG FG V +G L DG ++AVK +L S++ ++E +E H N+++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 340 LGCCI----QGEEK-LLIYEFVPNKSLDSFIFD---QERCKILDWSKRFHIICGTARGVM 391
LG CI QG K ++I F+ L +++ + K + + A G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
YL S +HRDL A N +L DM ++DFGL++
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 286 LGEGGFGPVYKGTLVDGQEI----AVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
LG+GGF Y+ T +D +E+ V + + +++ E+ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
+ ++ E +SL +R K + + + + T +GV YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLA 427
IHRDLK N+ L+ DM+ KI DFGLA
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 286 LGEGGFGPVYKGTLVDGQEI----AVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
LG+GGF Y+ T +D +E+ V + + +++ E+ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
+ ++ E +SL +R K + + + + T +GV YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLA 427
IHRDLK N+ L+ DM+ KI DFGLA
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D C++ LD + +++
Sbjct: 128 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 175
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D C++ LD + +++
Sbjct: 91 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 138
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 176
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D C++ LD + +++
Sbjct: 84 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 169
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D C++ LD + +++
Sbjct: 89 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 136
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 174
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D C++ LD + +++
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D C++ LD + +++
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D C++ LD + +++
Sbjct: 84 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 169
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D C++ LD + +++
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D C++ LD + +++
Sbjct: 91 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 138
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 176
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D C++ LD + +++
Sbjct: 83 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 130
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 168
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 282 INNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKNEVILFSKLQ-HRNLVKL 339
+ L EGGF VY+ V G+E A+KRL E+ + + EV KL H N+V+
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 340 LGCCIQGEEK--------LLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
G+E+ LL+ E + L F+ E L I T R V
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQ-LVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
++H+ + IIHRDLK N+LL K+ DFG A
Sbjct: 151 HMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D C++ LD + +++
Sbjct: 84 NV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 169
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 287 GEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQG 346
G FG V+K L++ +AVK +Q + + E+ ++H NL++ + +G
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRG 81
Query: 347 E----EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD------ 396
E LI F SL ++ + I+ W++ H+ +RG+ YLH+D
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 397 --SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ I HRD K+ NVLL D+ ++DFGLA F
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRF 173
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 286 LGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQH----------- 333
LG+G FG V K +D + A+K++ + +E+ L + +EV+L + L H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 334 --RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
RN VK + + + E+ N +L I + + D + + + +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD--EYWRLFRQILEALS 130
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
Y+H IIHRDLK N+ +D+ N KI DFGLA+
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D C++ LD + +++
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D C++ LD + +++
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 37 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D C++ LD + +++
Sbjct: 95 NV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 142
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 180
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D C++ LD + +++
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D C++ LD + +++
Sbjct: 91 NV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 138
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 176
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGT--LVDGQ--EIAVKRLSK---ISEQ 316
E PL L + D + KLG+G FG V +G G+ +AVK L +
Sbjct: 5 EGPLQSLTCLIGEKD-LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE 63
Query: 317 GLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDW 376
+ + EV L HRNL++L G + K+ + E P SL + + +L
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 377 SKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R+ + A G+ YL R IHRDL A N+LL KI DFGL RA
Sbjct: 123 LSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 21/155 (13%)
Query: 285 KLGEGGFGPVYKGTLVDGQEI-AVKR--LSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
K+GEG +G V+K + EI A+KR L E E+ L +L+H+N+V+L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFI------FDQERCKILDWSKRFHIICGTARGVMYLHQ 395
++ L++EF ++ L + D E K S F ++ +G+ + H
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVK----SFLFQLL----KGLGFCHS 119
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ ++HRDLK N+L++++ K++DFGLARAF
Sbjct: 120 RN---VLHRDLKPQNLLINRNGELKLADFGLARAF 151
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Query: 264 ELPLFELATIANATDNFSINNKLGEGGFGPVYKGT--LVDGQ--EIAVKRLSK---ISEQ 316
E PL L + D + KLG+G FG V +G G+ +AVK L +
Sbjct: 5 EGPLQSLTCLIGEKD-LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE 63
Query: 317 GLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDW 376
+ + EV L HRNL++L G + K+ + E P SL + + +L
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 377 SKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
R+ + A G+ YL R IHRDL A N+LL KI DFGL RA
Sbjct: 123 LSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D C++ LD + +++
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 34 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D C++ LD + +++
Sbjct: 92 NV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 139
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 177
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQ----EIAVKRLSKISEQGLKE-LKNEVILFSK 330
A ++ +N LGEG FG VY+G + + +AVK K KE +E ++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-FDQERCKILDWSKRFHIICGTARG 389
L H ++VKL+G I+ E +I E P L ++ ++ K+L IC +
Sbjct: 70 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC---KA 125
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ YL + +HRD+ N+L+ K+ DFGL+R
Sbjct: 126 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 21/166 (12%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD----GQ----EIAVKRLSKISEQGLKELKNEVILFS 329
++ N LG+G F ++KG + GQ E+ +K L K + + S
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
KL H++LV G C+ G+E +L+ EFV SLD+++ + C + W + + A
Sbjct: 68 KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAA 125
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDM-----NP---KISDFGLA 427
+ +L +++ +IH ++ A N+LL ++ NP K+SD G++
Sbjct: 126 MHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI------FDQERCKILDWSKRF-- 380
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 381 --HIIC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+IC A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQ----EIAVKRLSKISEQGLKE-LKNEVILFSK 330
A ++ +N LGEG FG VY+G + + +AVK K KE +E ++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-FDQERCKILDWSKRFHIICGTARG 389
L H ++VKL+G I+ E +I E P L ++ ++ K+L IC +
Sbjct: 82 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC---KA 137
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ YL + +HRD+ N+L+ K+ DFGL+R
Sbjct: 138 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI------FDQERCKILDWSKRF-- 380
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 381 --HIIC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+IC A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D ++ LD + +++
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART 175
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI------FDQERCKILDWSKRF-- 380
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 381 --HIIC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+IC A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 286 LGEGGFGPVYK-GTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 344
LG G FG V+K G ++A K + + +E+KNE+ + ++L H NL++L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 345 QGEEKLLIYEFVPNKSL-DSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ +L+ E+V L D I + LD IC G+ ++HQ + I+H
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC---EGIRHMHQ---MYILH 210
Query: 404 RDLKASNVL-LDQDMNP-KISDFGLARAF 430
DLK N+L +++D KI DFGLAR +
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRY 239
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQ----EIAVKRLSKISEQGLKE-LKNEVILFSK 330
A ++ +N LGEG FG VY+G + + +AVK K KE +E ++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-FDQERCKILDWSKRFHIICGTARG 389
L H ++VKL+G I+ E +I E P L ++ ++ K+L IC +
Sbjct: 66 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC---KA 121
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ YL + +HRD+ N+L+ K+ DFGL+R
Sbjct: 122 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI------FDQERCKILDWSKRF-- 380
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 381 --HIIC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+IC A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 140
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 140
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL--KNEVILFSK 330
IA+ + F+ ++G+G FG V+KG Q++ ++ + E + + E+ + S+
Sbjct: 18 IADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ 77
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ K G ++G + +I E++ S D R D + ++ +G+
Sbjct: 78 CDSSYVTKYYGSYLKGSKLWIIMEYLGGGS----ALDLLRAGPFDEFQIATMLKEILKGL 133
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
YLH + + IHRD+KA+NVLL + + K++DFG+A
Sbjct: 134 DYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI------FDQERCKILDWSKRF-- 380
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 381 --HIIC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+IC A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 139
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 179
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 140
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 142
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 139
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 179
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 142
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 67 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 117
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 118 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 157
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 142
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI------FDQERCKILDWSKRF-- 380
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 381 --HIIC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+IC A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 184 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 143
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 144 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 183
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI------FDQERCKILDWSKRF-- 380
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 381 --HIIC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+IC A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI------FDQERCKILDWSKRF-- 380
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 381 --HIIC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+IC A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 142
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 143
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 144 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 183
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 70 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 120
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 121 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 160
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 95 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 145
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 146 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 185
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 277 TDNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLS--KISEQGLKELKNEVILFSKLQH 333
+DN+ + +LG+G F V + G E A K ++ K+S + ++L+ E + KLQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
N+V+L + L+++ V L I +E D S H I + Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 120
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLA 427
H + I+HR+LK N+LL K++DFGLA
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 277 TDNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLS--KISEQGLKELKNEVILFSKLQH 333
+DN+ + +LG+G F V + G E A K ++ K+S + ++L+ E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
N+V+L + L+++ V L I +E D S H I + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 121
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLA 427
H + I+HR+LK N+LL K++DFGLA
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 68 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 118
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 119 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 158
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 277 TDNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLS--KISEQGLKELKNEVILFSKLQH 333
+DN+ + +LG+G F V + G E A K ++ K+S + ++L+ E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
N+V+L + L+++ V L I +E D S H I + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 121
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLA 427
H + I+HR+LK N+LL K++DFGLA
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 69 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 119
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 120 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 159
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 260 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKIS 314
+M E P F EL TI + + + +G G +G V G +AVK+LS+
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF 79
Query: 315 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------- 364
+ + K E+ L ++H N++ LL F P +SL+ F
Sbjct: 80 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 127
Query: 365 -----IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
+ + +C+ L +I RG+ Y+H IIHRDLK SN+ +++D
Sbjct: 128 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 184
Query: 420 KISDFGLAR 428
KI DFGLAR
Sbjct: 185 KILDFGLAR 193
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 260 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKIS 314
+M E P F EL TI + + + +G G +G V G +AVK+LS+
Sbjct: 19 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF 78
Query: 315 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------- 364
+ + K E+ L ++H N++ LL F P +SL+ F
Sbjct: 79 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 126
Query: 365 -----IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
+ + +C+ L +I RG+ Y+H IIHRDLK SN+ +++D
Sbjct: 127 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 183
Query: 420 KISDFGLAR 428
KI DFGLAR
Sbjct: 184 KILDFGLAR 192
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGP-VYKGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 140
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 142
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 125 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 164
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 277 TDNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLS--KISEQGLKELKNEVILFSKLQH 333
+DN+ + +LG+G F V + G E A K ++ K+S + ++L+ E + KLQH
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
N+V+L + L+++ V L I +E D S H I + Y
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 144
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLA 427
H + I+HR+LK N+LL K++DFGLA
Sbjct: 145 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 30/159 (18%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 342
+G G G V + + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 343 CIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTARGV 390
F P KSL+ F + D ++ LD + +++ G+
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
+LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 260 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKIS 314
+M E P F EL TI + + + +G G +G V G +AVK+LS+
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF 79
Query: 315 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------- 364
+ + K E+ L ++H N++ LL F P +SL+ F
Sbjct: 80 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 127
Query: 365 -----IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
+ + +C+ L +I RG+ Y+H IIHRDLK SN+ +++D
Sbjct: 128 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 184
Query: 420 KISDFGLAR 428
KI DFGLAR
Sbjct: 185 KILDFGLAR 193
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D ++ LD + +++
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 34/178 (19%)
Query: 269 ELA-TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNE 324
ELA TI + + + +G G +G V G +AVK+LS+ + + K E
Sbjct: 8 ELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 325 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERC 371
+ L ++H N++ LL F P +SL+ F + + +C
Sbjct: 68 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 115
Query: 372 -KILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
K+ D +F +I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 116 AKLTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 260 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKIS 314
+M E P F EL TI + + + +G G +G V G +AVK+LSK
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPF 71
Query: 315 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------- 364
+ + K E+ L ++H N++ LL F P +SL+ F
Sbjct: 72 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 119
Query: 365 -----IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
+ + +C+ L +I RG+ Y+H IIHRDLK SN+ +++D
Sbjct: 120 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 176
Query: 420 KISDFGLAR 428
KI DFGLAR
Sbjct: 177 KILDFGLAR 185
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D ++ LD + +++
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 25/162 (15%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC-- 342
+G GGFG V+K +DG+ +KR+ +E+ +E+K +KL H N+V GC
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVK----ALAKLDHVNIVHYNGCWD 74
Query: 343 ------------CIQGEEKLLI--YEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTAR 388
+ + K L EF +L+ +I ++ R + LD + +
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALELFEQITK 133
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
GV Y+H ++I+RDLK SN+ L KI DFGL +
Sbjct: 134 GVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 333
++F LGEG F V L +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 334 RNLVKLLGCCIQGEEKLLI-YEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 387
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD-ETCT------RFYT-AEIV 142
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 279 NFSINNKLGEGGFGPVYKGT--LVDGQ--EIAVKRLSK---ISEQGLKELKNEVILFSKL 331
+ + KLG+G FG V +G G+ +AVK L + + + EV L
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
HRNL++L G + K+ + E P SL + + +L R+ + A G+
Sbjct: 69 DHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMG 125
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
YL R IHRDL A N+LL KI DFGL RA
Sbjct: 126 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 279 NFSINNKLGEGGFGPVYKGT--LVDGQ--EIAVKRLSK---ISEQGLKELKNEVILFSKL 331
+ + KLG+G FG V +G G+ +AVK L + + + EV L
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
HRNL++L G + K+ + E P SL + + +L R+ + A G+
Sbjct: 73 DHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMG 129
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
YL R IHRDL A N+LL KI DFGL RA
Sbjct: 130 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD------GQEIAVKRLSKISEQGLKE-LKNEVILFSK 330
+ S LG G FG V + T +AVK L + +E L +E+ + S
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 331 L-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSL--------DSFIFDQERCKILDWSKRFH 381
L H N+V LLG C G L+I E+ L DSFI + I++ +
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 382 IICG-------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A+G+ +L + IHRDL A N+LL KI DFGLAR
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR 193
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 72 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 120 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 11/158 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHR 334
D + I + +G G +G V + ++ + +A+K++ ++ E + K + E+ + ++L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHI---ICGTARGVM 391
++VK+L I + + +V + DS R + + HI + GV
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVK 170
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
Y+H I+HRDLK +N L++QD + K+ DFGLAR
Sbjct: 171 YVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLART 205
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 21 TIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 81 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 129 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 72 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 120 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 279 NFSINNKLGEGGFGPVYKGT--LVDGQ--EIAVKRLSK---ISEQGLKELKNEVILFSKL 331
+ + KLG+G FG V +G G+ +AVK L + + + EV L
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
HRNL++L G + K+ + E P SL + + +L R+ + A G+
Sbjct: 69 DHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMG 125
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
YL R IHRDL A N+LL KI DFGL RA
Sbjct: 126 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 279 NFSINNKLGEGGFGPVYKGT--LVDGQ--EIAVKRLSK---ISEQGLKELKNEVILFSKL 331
+ + KLG+G FG V +G G+ +AVK L + + + EV L
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
HRNL++L G + K+ + E P SL + + +L R+ + A G+
Sbjct: 73 DHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMG 129
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
YL R IHRDL A N+LL KI DFGL RA
Sbjct: 130 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 82 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 130 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 279 NFSINNKLGEGGFGPVYKGT--LVDGQ--EIAVKRLSK---ISEQGLKELKNEVILFSKL 331
+ + KLG+G FG V +G G+ +AVK L + + + EV L
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
HRNL++L G + K+ + E P SL + + +L R+ + A G+
Sbjct: 69 DHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMG 125
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
YL R IHRDL A N+LL KI DFGL RA
Sbjct: 126 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D ++ LD + +++
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLC 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART 175
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 81 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 129 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD------GQEIAVKRLSKISEQGLKE-LKNEVILFSK 330
+ S LG G FG V + T +AVK L + +E L +E+ + S
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 331 L-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSL--------DSFIFDQERCKILDWSKRFH 381
L H N+V LLG C G L+I E+ L DSFI + I++ +
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 382 IICG-------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A+G+ +L + IHRDL A N+LL KI DFGLAR
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR 209
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD------GQEIAVKRLSKISEQGLKE-LKNEVILFSK 330
+ S LG G FG V + T +AVK L + +E L +E+ + S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 331 L-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSL--------DSFIFDQERCKILDWSKRFH 381
L H N+V LLG C G L+I E+ L DSFI + I++ +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 382 IICG-------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A+G+ +L + IHRDL A N+LL KI DFGLAR
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 284 NKLGEGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++LG+G FG V L D G +AVK+L ++ + E+ + L +VK
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 339 LLGCCI-QGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
G G + L L+ E++P+ L F+ Q LD S+ +G+ YL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 131
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
SR R +HRDL A N+L++ + + KI+DFGLA+
Sbjct: 132 SR-RCVHRDLAARNILVESEAHVKIADFGLAK 162
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 286 LGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQH----------- 333
LG+G FG V K +D + A+K++ + +E+ L + +EV L + L H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 334 --RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
RN VK + + E+ N++L I + + D + + + +
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD--EYWRLFRQILEALS 130
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
Y+H IIHR+LK N+ +D+ N KI DFGLA+
Sbjct: 131 YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI------FDQERCKILDWSKRF-- 380
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 381 --HIIC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+IC A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 149 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 284 NKLGEGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++LG+G FG V L D G +AVK+L ++ + E+ + L +VK
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 339 LLGCCI-QGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
G G + L L+ E++P+ L F+ Q LD S+ +G+ YL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 144
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
SR R +HRDL A N+L++ + + KI+DFGLA+
Sbjct: 145 SR-RCVHRDLAARNILVESEAHVKIADFGLAK 175
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D ++ LD + +++
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART 175
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD------GQEIAVKRLSKISEQGLKE-LKNEVILFSK 330
+ S LG G FG V + T +AVK L + +E L +E+ + S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 331 L-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSL--------DSFIFDQERCKILDWSKRFH 381
L H N+V LLG C G L+I E+ L DSFI + I++ +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 382 IICG-------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A+G+ +L + IHRDL A N+LL KI DFGLAR
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQE-IAVKRLS-KISEQGLKELKNEVILFSKLQHRN 335
D++ + +G G V +E +A+KR++ + + + EL E+ S+ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD-----QERCKILDWSKRFHIICGTARGV 390
+V + +E L+ + + S+ I + + +LD S I+ G+
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
YLH++ + IHRD+KA N+LL +D + +I+DFG++
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 21/155 (13%)
Query: 285 KLGEGGFGPVYKGTLVDGQEI-AVKR--LSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
K+GEG +G V+K + EI A+KR L E E+ L +L+H+N+V+L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFI------FDQERCKILDWSKRFHIICGTARGVMYLHQ 395
++ L++EF ++ L + D E K S F ++ +G+ + H
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVK----SFLFQLL----KGLGFCHS 119
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ ++HRDLK N+L++++ K+++FGLARAF
Sbjct: 120 RN---VLHRDLKPQNLLINRNGELKLANFGLARAF 151
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQE-IAVKRLS-KISEQGLKELKNEVILFSKLQHRN 335
D++ + +G G V +E +A+KR++ + + + EL E+ S+ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFD-----QERCKILDWSKRFHIICGTARGV 390
+V + +E L+ + + S+ I + + +LD S I+ G+
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
YLH++ + IHRD+KA N+LL +D + +I+DFG++
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 45/212 (21%)
Query: 233 GGQDFYIRMSASELEKTENNRETDQVQNMDLELPLFELATIANATDNFSINNKLGEGGFG 292
G ++ Y + +AS+ T +E ++ TI + + + +G G +G
Sbjct: 14 GTENLYFQSNASQERPTFYRQELNK--------------TIWEVPERYQNLSPVGSGAYG 59
Query: 293 PVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEK 349
V G +AVK+LS+ + + K E+ L ++H N++ LL
Sbjct: 60 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------- 112
Query: 350 LLIYEFVPNKSLDSF-------------IFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
F P +SL+ F + + +C+ L +I RG+ Y+H
Sbjct: 113 -----FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 167
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 168 D---IIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD------GQEIAVKRLSKISEQGLKE-LKNEVILFSK 330
+ S LG G FG V + T +AVK L + +E L +E+ + S
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 331 L-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSL--------DSFIFDQERCKILDWSKRFH 381
L H N+V LLG C G L+I E+ L DSFI + I++ +
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 382 IICG-------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ A+G+ +L + IHRDL A N+LL KI DFGLAR
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR 211
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
Query: 286 LGEGGFGPVYKGTLVDGQ-EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 344
LG+G +G VY G + Q IA+K + + + + L E+ L L+H+N+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 345 QGEEKLLIYEFVPNKSLDSFIF-------DQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+ + E VP SL + + D E+ I ++K+ G+ YLH +
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT-IGFYTKQI------LEGLKYLHDN- 141
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
+I+HRD+K NVL++ KISDFG ++
Sbjct: 142 --QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P K+L+ F + D ++ LD + +++
Sbjct: 83 NV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX 130
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART 168
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 87 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 134
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 135 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR 184
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV--DGQ--EIAVKRLSK--ISEQGLKELKNEVILFSKLQ 332
F++ LG+G FG V + L DG ++AVK L I+ ++E E +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 333 HRNLVKLLGCCIQGEEK------LLIYEFVPNKSLDSFIFDQ---ERCKILDWSKRFHII 383
H ++ KL+G ++ K ++I F+ + L +F+ E L +
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 384 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G+ YL S IHRDL A N +L +DM ++DFGL+R
Sbjct: 144 VDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 284 NKLGEGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++LG+G FG V L D G +AVK+L ++ + E+ + L +VK
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 339 LLGCCI-QGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
G G + L L+ E++P+ L F+ Q LD S+ +G+ YL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 132
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
SR R +HRDL A N+L++ + + KI+DFGLA+
Sbjct: 133 SR-RCVHRDLAARNILVESEAHVKIADFGLAK 163
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
Query: 286 LGEGGFGPVYKGTLVDGQ-EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 344
LG+G +G VY G + Q IA+K + + + + L E+ L L+H+N+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 345 QGEEKLLIYEFVPNKSLDSFIF-------DQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+ + E VP SL + + D E+ I ++K+ G+ YLH +
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT-IGFYTKQI------LEGLKYLHDN- 127
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
+I+HRD+K NVL++ KISDFG ++
Sbjct: 128 --QIVHRDIKGDNVLINTYSGVLKISDFGTSK 157
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSK---ISEQGLKELKNEVILFSKL 331
DNF LG+G FG V + + G AVK L K + + ++ E + S
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 332 QHRNLVKLLGCCIQGEEKLL-IYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
++ + L CC Q ++L + EFV L +F ++ + D ++ +
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEIISAL 137
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
M+LH II+RDLK NVLLD + + K++DFG+ +
Sbjct: 138 MFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 26 TIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 86 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 133
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 134 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 183
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 260 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKIS 314
+M E P F EL TI + + + +G G +G V G +AVK+LS+
Sbjct: 19 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 78
Query: 315 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------- 364
+ + K E+ L ++H N++ LL F P +SL+ F
Sbjct: 79 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 126
Query: 365 -----IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
+ + +C+ L +I RG+ Y+H IIHRDLK SN+ +++D
Sbjct: 127 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 183
Query: 420 KISDFGLAR 428
KI DFGLAR
Sbjct: 184 KILDFGLAR 192
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D ++ LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFIFDQERCKIL-----DWSKRF--- 380
H N+V LLG C + G ++I EF +L +++ + + D K F
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 381 -HIIC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+IC A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 260 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKIS 314
+M E P F EL TI + + + +G G +G V G +AVK+LS+
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 71
Query: 315 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------- 364
+ + K E+ L ++H N++ LL F P +SL+ F
Sbjct: 72 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 119
Query: 365 -----IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
+ + +C+ L +I RG+ Y+H IIHRDLK SN+ +++D
Sbjct: 120 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 176
Query: 420 KISDFGLAR 428
KI DFGLAR
Sbjct: 177 KILDFGLAR 185
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 260 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKIS 314
+M E P F EL TI + + + +G G +G V G +AVK+LS+
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 71
Query: 315 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------- 364
+ + K E+ L ++H N++ LL F P +SL+ F
Sbjct: 72 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 119
Query: 365 -----IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
+ + +C+ L +I RG+ Y+H IIHRDLK SN+ +++D
Sbjct: 120 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 176
Query: 420 KISDFGLAR 428
KI DFGLAR
Sbjct: 177 KILDFGLAR 185
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 34/160 (21%)
Query: 286 LGEGGFGPVYKGTLVD---GQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G +G V + +D G+++A+K+LS+ SE K E++L +QH N++ LL
Sbjct: 50 VGSGAYGSV--CSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFI----------FDQERCKILDWS--KRFHIICGTAR 388
F P SL +F D ++ +++S K +++ +
Sbjct: 108 DV------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLK 155
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
G+ Y+H ++HRDLK N+ +++D KI DFGLAR
Sbjct: 156 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 260 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKIS 314
+M E P F EL TI + + + +G G +G V G +AVK+LS+
Sbjct: 2 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 61
Query: 315 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------- 364
+ + K E+ L ++H N++ LL F P +SL+ F
Sbjct: 62 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 109
Query: 365 -----IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
+ + +C+ L +I RG+ Y+H IIHRDLK SN+ +++D
Sbjct: 110 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSEL 166
Query: 420 KISDFGLAR 428
KI DFGLAR
Sbjct: 167 KILDFGLAR 175
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 260 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKIS 314
+M E P F EL TI + + + +G G +G V G +AVK+LS+
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 79
Query: 315 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------- 364
+ + K E+ L ++H N++ LL F P +SL+ F
Sbjct: 80 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 127
Query: 365 -----IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
+ + +C+ L +I RG+ Y+H IIHRDLK SN+ +++D
Sbjct: 128 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 184
Query: 420 KISDFGLAR 428
KI DFGLAR
Sbjct: 185 KILDFGLAR 193
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 19/153 (12%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKISEQGLKELKN--EVILFSKLQHRNLVKLL 340
+G G +G V Y L Q++AVK+LS+ + + + E+ L L+H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 341 -----GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
I+ ++ + + L++ + +C+ L ++ RG+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IIHRDLK SNV +++D +I DFGLAR
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D ++ LD + +++
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 82 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 130 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR 179
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 83 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 131 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 260 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKIS 314
+M E P F EL TI + + + +G G +G V G +AVK+LS+
Sbjct: 2 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 61
Query: 315 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------- 364
+ + K E+ L ++H N++ LL F P +SL+ F
Sbjct: 62 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 109
Query: 365 -----IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
+ + +C+ L +I RG+ Y+H IIHRDLK SN+ +++D
Sbjct: 110 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 166
Query: 420 KISDFGLAR 428
KI DFGLAR
Sbjct: 167 KILDFGLAR 175
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 26/156 (16%)
Query: 286 LGEGGFGPVYKGTLVD---GQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G +G V + +D G+++A+K+LS+ SE K E++L +QH N++ LL
Sbjct: 32 VGSGAYGSV--CSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 341 GCCIQGEEKLLIYEF---VPNKSLD-----SFIFDQERCKILDWSKRFHIICGTARGVMY 392
Y+F +P D F +E+ + +++ +G+ Y
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQ--------YLVYQMLKGLKY 141
Query: 393 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+H ++HRDLK N+ +++D KI DFGLAR
Sbjct: 142 IHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 78 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 126 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 83 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 131 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 83 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 131 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 21/166 (12%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD----GQ----EIAVKRLSKISEQGLKELKNEVILFS 329
++ N LG+G F ++KG + GQ E+ +K L K + + S
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
KL H++LV G C G+E +L+ EFV SLD+++ + C + W + + A
Sbjct: 68 KLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWA 125
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDM-----NP---KISDFGLA 427
+ +L +++ +IH ++ A N+LL ++ NP K+SD G++
Sbjct: 126 MHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 78 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 126 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSK 330
+ ++ +LG+G FG VY+G ++ G+ +AVK +++ S + E NE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR--------FHI 382
++V+LLG +G+ L++ E + + L S++ R + + R +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 135
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G+ YL+ + +HRDL A N ++ D KI DFG+ R
Sbjct: 136 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 19/153 (12%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKISEQGLKELKN--EVILFSKLQHRNLVKLL 340
+G G +G V Y L Q++AVK+LS+ + + + E+ L L+H N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 341 -----GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
I+ ++ + + L++ + +C+ L ++ RG+ Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IIHRDLK SNV +++D +I DFGLAR
Sbjct: 142 AG---IIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSK 330
+ ++ +LG+G FG VY+G ++ G+ +AVK +++ S + E NE +
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 73
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR--------FHI 382
++V+LLG +G+ L++ E + + L S++ R + + R +
Sbjct: 74 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 132
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G+ YL+ + +HRDL A N ++ D KI DFG+ R
Sbjct: 133 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSK 330
+ ++ +LG+G FG VY+G ++ G+ +AVK +++ S + E NE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR--------FHI 382
++V+LLG +G+ L++ E + + L S++ R + + R +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 135
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G+ YL+ + +HRDL A N ++ D KI DFG+ R
Sbjct: 136 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSK 330
+ ++ +LG+G FG VY+G ++ G+ +AVK +++ S + E NE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR--------FHI 382
++V+LLG +G+ L++ E + + L S++ R + + R +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 135
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G+ YL+ + +HRDL A N ++ D KI DFG+ R
Sbjct: 136 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 81 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 129 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 15 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 75 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 122
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 123 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 87 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 134
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 135 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 184
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 83 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 131 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSK 330
+ ++ +LG+G FG VY+G ++ G+ +AVK +++ S + E NE +
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 75
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR--------FHI 382
++V+LLG +G+ L++ E + + L S++ R + + R +
Sbjct: 76 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 134
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G+ YL+ + +HRDL A N ++ D KI DFG+ R
Sbjct: 135 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 82 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 130 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 81 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 129 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 72 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 120 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 14 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 73
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 74 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 121
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 122 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 171
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 73 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 121 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSK 330
+ ++ +LG+G FG VY+G ++ G+ +AVK +++ S + E NE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR--------FHI 382
++V+LLG +G+ L++ E + + L S++ R + + R +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 135
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G+ YL+ + +HRDL A N ++ D KI DFG+ R
Sbjct: 136 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 73 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 121 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 99 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 146
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 147 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D ++ LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFIFDQ--ERCKILDWSKRF----HI 382
H N+V LLG C + G ++I EF +L +++ + E D K F H+
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 383 IC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
I A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 147 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 82 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 130 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQE-IAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 335
D + + LG G F V Q+ +A+K ++K + +G + ++NE+ + K++H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 77
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+V L G LI + V L I ++ D S+ +I V YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD 134
Query: 396 DSRLRIIHRDLKASNVL---LDQDMNPKISDFGLAR 428
L I+HRDLK N+L LD+D ISDFGL++
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQ--GLKELKNEVILFS 329
+ N + +F + + LGEG +G V T G+ +A+K++ + L+ L+ E+ +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 330 KLQHRNLVKLLGC----CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICG 385
+H N++ + + ++ I + + L I Q +L + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ----MLSDDHIQYFIYQ 120
Query: 386 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
T R V LH + +IHRDLK SN+L++ + + K+ DFGLAR
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLAR 160
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQ--GLKELKNEVILFS 329
+ N + +F + + LGEG +G V T G+ +A+K++ + L+ L+ E+ +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 330 KLQHRNLVKLLGC----CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICG 385
+H N++ + + ++ I + + L I Q +L + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ----MLSDDHIQYFIYQ 120
Query: 386 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
T R V LH + +IHRDLK SN+L++ + + K+ DFGLAR
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLAR 160
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKISEQ--GLKELKNEVILFS 329
+ N + +F + + LGEG +G V T G+ +A+K++ + L+ L+ E+ +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 330 KLQHRNLVKLLGC----CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICG 385
+H N++ + + ++ I + + L I Q +L + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ----MLSDDHIQYFIYQ 120
Query: 386 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
T R V LH + +IHRDLK SN+L++ + + K+ DFGLAR
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLAR 160
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 33/178 (18%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVD--GQEIAVKRLS-KISEQG--LKELKNEVIL 327
+ A + ++GEG +G V+K + G+ +A+KR+ + E+G L ++ +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 328 --FSKLQHRNLVKLLGCCIQG----EEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
+H N+V+L C E KL L++E V DQ+ LD
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEP 115
Query: 381 HIICGTA--------RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ T RG+ +LH R++HRDLK N+L+ K++DFGLAR +
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 284 NKLGEGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
++LG+G FG V L D G +AVK+L ++ + E+ + L +VK
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 339 LLGCCI-QGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
G G +L L+ E++P+ L F+ Q LD S+ +G+ YL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 128
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
SR R +HRDL A N+L++ + + KI+DFGLA+
Sbjct: 129 SR-RCVHRDLAARNILVESEAHVKIADFGLAK 159
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 33/178 (18%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVD--GQEIAVKRLS-KISEQG--LKELKNEVIL 327
+ A + ++GEG +G V+K + G+ +A+KR+ + E+G L ++ +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 328 --FSKLQHRNLVKLLGCCIQG----EEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
+H N+V+L C E KL L++E V DQ+ LD
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEP 115
Query: 381 HIICGTA--------RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ T RG+ +LH R++HRDLK N+L+ K++DFGLAR +
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 13/171 (7%)
Query: 268 FELATIANA--TDNFSINNKLGEGGFGPVYKGTLVDG-QEIAVKRLSKISEQGL--KELK 322
F+ A I N DN+ I + +G G +G VY + + +A+K+++++ E + K +
Sbjct: 16 FQGAIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRIL 75
Query: 323 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYE--FVPNKSLDSFIFDQERCKILDWSKRF 380
E+ + ++L+ +++L I E LL ++ ++ + DS + + I +
Sbjct: 76 REITILNRLKSDYIIRLHDLII--PEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHV 133
Query: 381 H-IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
I+ G ++H+ IIHRDLK +N LL+QD + KI DFGLAR
Sbjct: 134 KTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 33/178 (18%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVD--GQEIAVKRLS-KISEQG--LKELKNEVIL 327
+ A + ++GEG +G V+K + G+ +A+KR+ + E+G L ++ +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 328 --FSKLQHRNLVKLLGCCIQG----EEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
+H N+V+L C E KL L++E V DQ+ LD
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEP 115
Query: 381 HIICGTA--------RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ T RG+ +LH R++HRDLK N+L+ K++DFGLAR +
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQE-IAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 335
D + + LG G F V Q+ +A+K ++K + +G + ++NE+ + K++H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+V L G LI + V L I ++ D S+ +I V YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD 134
Query: 396 DSRLRIIHRDLKASNVL---LDQDMNPKISDFGLAR 428
L I+HRDLK N+L LD+D ISDFGL++
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D ++ LD + +++
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQE-IAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 335
D + + LG G F V Q+ +A+K ++K + +G + ++NE+ + K++H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+V L G LI + V L I ++ D S+ +I V YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD 134
Query: 396 DSRLRIIHRDLKASNVL---LDQDMNPKISDFGLAR 428
L I+HRDLK N+L LD+D ISDFGL++
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQE-IAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 335
D + + LG G F V Q+ +A+K ++K + +G + ++NE+ + K++H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+V L G LI + V L I ++ D S+ +I V YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD 134
Query: 396 DSRLRIIHRDLKASNVL---LDQDMNPKISDFGLAR 428
L I+HRDLK N+L LD+D ISDFGL++
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 280 FSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS--KISEQGLKELKNEVILFSKLQHRNL 336
+ + +LG+G F V + ++ GQE A K ++ K+S + ++L+ E + L+H N+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
V+L + LI++ V L I +E D S H I V++ HQ
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAVLHCHQ- 139
Query: 397 SRLRIIHRDLKASNVLLDQDMN---PKISDFGLA 427
+ ++HRDLK N+LL + K++DFGLA
Sbjct: 140 --MGVVHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI D+GLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQ 345
+G+G FG V G G ++AVK + ++ + E + ++L+H NLV+LLG ++
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 346 GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHR 404
+ L ++ E++ SL ++ + R +L + YL ++ +HR
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 313
Query: 405 DLKASNVLLDQDMNPKISDFGLAR 428
DL A NVL+ +D K+SDFGL +
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 34/161 (21%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G G V Y L + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 388
F P KSL+ F + D ++ LD + +++
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
G+ +LH IIHRDLK SN+++ D KI DFGLAR
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 270 LATIANATDNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLS--KISEQGLKELKNEVI 326
+AT TD++ + +LG+G F V + QE A K ++ K+S + ++L+ E
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 327 LFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGT 386
+ L+H N+V+L + L+++ V L I +E D S H I
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIHQI 139
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLA 427
V ++HQ I+HRDLK N+LL + K++DFGLA
Sbjct: 140 LESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 38/175 (21%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC-- 342
+G GGFG V+K +DG+ ++R+ +E+ +E+K +KL H N+V GC
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVK----ALAKLDHVNIVHYNGCWD 75
Query: 343 -------------------------CIQGEEKLLI--YEFVPNKSLDSFIFDQERCKILD 375
+ + K L EF +L+ +I ++ R + LD
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLD 134
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ +GV Y+H ++IHRDLK SN+ L KI DFGL +
Sbjct: 135 KVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQ 345
+G+G FG V G G ++AVK + ++ + E + ++L+H NLV+LLG ++
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 346 GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHR 404
+ L ++ E++ SL ++ + R +L + YL ++ +HR
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 405 DLKASNVLLDQDMNPKISDFGLAR 428
DL A NVL+ +D K+SDFGL +
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRL---SKISEQGLK-ELKNEVILFSKLQH 333
D+F I LG+G FG VY I ++ S+I ++G++ +L+ E+ + + L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSL-----DSFIFDQERCKILDWSKRFHIICGTAR 388
N+++L LI E+ P L S FD++R I+ A
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT--------IMEELAD 134
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+MY H ++IHRD+K N+LL KI+DFG
Sbjct: 135 ALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELK 322
L E+ D+F I LG+G FG VY + I A+K L S++ ++G++ +L+
Sbjct: 3 LAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 62
Query: 323 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHI 382
E+ + S L+H N++++ + L+ EF P L + R D +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATF 119
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+ A + Y H+ ++IHRD+K N+L+ KI+DFG
Sbjct: 120 MEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSK 330
+ ++ +LG+G FG VY+G ++ G+ +AVK +++ S + E NE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR--------FHI 382
++V+LLG +G+ L++ E + + L S++ R + + R +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 135
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G+ YL+ + +HR+L A N ++ D KI DFG+ R
Sbjct: 136 AAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSK 330
+ ++ +LG+G FG VY+G ++ G+ +AVK +++ S + E NE +
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 77
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR--------FHI 382
++V+LLG +G+ L++ E + + L S++ R + + R +
Sbjct: 78 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 136
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
A G+ YL+ + +HR+L A N ++ D KI DFG+ R
Sbjct: 137 AAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELK 322
L E+ D+F I LG+G FG VY + I A+K L S++ ++G++ +L+
Sbjct: 4 LAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 63
Query: 323 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHI 382
E+ + S L+H N++++ + L+ EF P L + R D +
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATF 120
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+ A + Y H+ ++IHRD+K N+L+ KI+DFG
Sbjct: 121 MEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 23/157 (14%)
Query: 285 KLGEGGFGPVYKGTLV----DGQEIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 338
K+GEG FG K LV DG++ +K + S++S + +E + EV + + ++H N+V+
Sbjct: 31 KIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQ 87
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERC-----KILDWSKRFHIICGTARGVMYL 393
+ ++ ++ L I Q+ +ILDW F IC +
Sbjct: 88 YRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW---FVQICLALK----- 139
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
H R +I+HRD+K+ N+ L +D ++ DFG+AR
Sbjct: 140 HVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKIS-EQGLK-ELKNEVILFSKLQ 332
AT + ++G G +G VYK G +A+K + + E+GL EV L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 333 ---HRNLVKLLGCCIQGE-----EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
H N+V+L+ C + L++E V ++ L +++ D+ L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
RG+ +LH + I+HRDLK N+L+ K++DFGLAR +
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 162
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQ 345
+G+G FG V G G ++AVK + ++ + E + ++L+H NLV+LLG ++
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 346 GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHR 404
+ L ++ E++ SL ++ + R +L + YL ++ +HR
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 132
Query: 405 DLKASNVLLDQDMNPKISDFGLAR 428
DL A NVL+ +D K+SDFGL +
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKIS-EQGLK-ELKNEVILFSKLQ 332
AT + ++G G +G VYK G +A+K + + E+GL EV L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 333 ---HRNLVKLLGCCIQGE-----EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
H N+V+L+ C + L++E V ++ L +++ D+ L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
RG+ +LH + I+HRDLK N+L+ K++DFGLAR +
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 162
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 285 KLGEGGFGPVYKGTLVDGQ-EIAVKRLSKIS-------------EQGLKELKNEVILFSK 330
KLG G +G V +G E A+K + K E+ +E+ NE+ L
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
L H N++KL + L+ EF L I ++ + D +I+ G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSGI 159
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQD---MNPKISDFGLARAF 430
YLH+ + I+HRD+K N+LL+ +N KI DFGL+ F
Sbjct: 160 CYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKIS-EQGLK-ELKNEVILFSKLQ 332
AT + ++G G +G VYK G +A+K + + E+GL EV L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 333 ---HRNLVKLLGCCIQGE-----EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
H N+V+L+ C + L++E V ++ L +++ D+ L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
RG+ +LH + I+HRDLK N+L+ K++DFGLAR +
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 162
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS--KISEQGLKELKNEVILF 328
T T+ + + +LG+G F V + ++ GQE A ++ K+S + ++L+ E +
Sbjct: 5 TCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARIC 64
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTAR 388
L+H N+V+L + LI++ V L I +E D S H I
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILE 121
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLA 427
V++ HQ + ++HR+LK N+LL + K++DFGLA
Sbjct: 122 AVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 19/153 (12%)
Query: 286 LGEGGFGPV---YKGTLVDGQEIAVKRLSKISEQGLKELKN--EVILFSKLQHRNLVKLL 340
+G G +G V Y L Q++AVK+LS+ + + + E+ L L+H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 341 -----GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
I+ ++ + + L++ + Q + D +F ++ RG+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ---ALSDEHVQF-LVYQLLRGLKYIHS 149
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
IIHRDLK SNV +++D +I DFGLAR
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQ 345
+G+G FG V G G ++AVK + ++ + E + ++L+H NLV+LLG ++
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 346 GEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHR 404
+ L ++ E++ SL ++ + R +L + YL ++ +HR
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 405 DLKASNVLLDQDMNPKISDFGLAR 428
DL A NVL+ +D K+SDFGL +
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLS--KISEQGLKELKNEVILFSKLQH 333
TD + + +G+G F V + L G E A K ++ K+S + ++L+ E + L+H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
N+V+L + L+++ V L I +E D S H I V++
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAVLHC 119
Query: 394 HQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLA 427
HQ + ++HRDLK N+LL + K++DFGLA
Sbjct: 120 HQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSK----ISEQGLKELKNEVILFSKLQHRNLVKLLG 341
LG+GGF ++ + D +E+ ++ + +++ E+ + L H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
+ ++ E +SL +R K L + + + G YLH++ R+
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 142
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLA 427
IHRDLK N+ L++D+ KI DFGLA
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSK----ISEQGLKELKNEVILFSKLQHRNLVKLLG 341
LG+GGF ++ + D +E+ ++ + +++ E+ + L H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
+ ++ E +SL +R K L + + + G YLH++ R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 162
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLA 427
IHRDLK N+ L++D+ KI DFGLA
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 31/179 (17%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD------GQEIAVKRLSKISEQGLKE-LKNEVILFSK 330
+N LG G FG V T ++AVK L + ++ +E L +E+ + ++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 331 L-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIF--------------------DQE 369
L H N+V LLG C LI+E+ L +++ ++E
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 370 RCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+L + A+G+ +L S +HRDL A NVL+ KI DFGLAR
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSK----ISEQGLKELKNEVILFSKLQHRNLVKLLG 341
LG+GGF ++ + D +E+ ++ + +++ E+ + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
+ ++ E +SL +R K L + + + G YLH++ R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLA 427
IHRDLK N+ L++D+ KI DFGLA
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSK----ISEQGLKELKNEVILFSKLQHRNLVKLLG 341
LG+GGF ++ + D +E+ ++ + +++ E+ + L H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
+ ++ E +SL +R K L + + + G YLH++ R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 160
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLA 427
IHRDLK N+ L++D+ KI DFGLA
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSK----ISEQGLKELKNEVILFSKLQHRNLVKLLG 341
LG+GGF ++ + D +E+ ++ + +++ E+ + L H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
+ ++ E +SL +R K L + + + G YLH++ R+
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 136
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLA 427
IHRDLK N+ L++D+ KI DFGLA
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 280 FSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKIS-EQGLKELKNEVILFSKLQHRNLV 337
+ ++ +G GGF V ++ G+ +A+K + K + L +K E+ L+H+++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+L + ++ E+ P L +I Q+R + F I V Y+H
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVS---AVAYVHSQG 128
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGL 426
HRDLK N+L D+ K+ DFGL
Sbjct: 129 ---YAHRDLKPENLLFDEYHKLKLIDFGL 154
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSK----ISEQGLKELKNEVILFSKLQHRNLVKLLG 341
LG+GGF ++ + D +E+ ++ + +++ E+ + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 401
+ ++ E +SL +R K L + + + G YLH++ R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 402 IHRDLKASNVLLDQDMNPKISDFGLA 427
IHRDLK N+ L++D+ KI DFGLA
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 279 NFSINNKLGEGGFGPVYK-GTLVDGQEIAVKRLSKISEQGLKELKN---EVILFSKLQHR 334
+F I LG G FG V+ + +G+ A+K L K LK++++ E ++ S + H
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 335 NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
++++ G ++ +I +++ L S + +R + +F+ + YLH
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP--NPVAKFYA-AEVCLALEYLH 123
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
II+RDLK N+LLD++ + KI+DFG A+
Sbjct: 124 SKD---IIYRDLKPENILLDKNGHIKITDFGFAK 154
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 33/174 (18%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF--IFDQERC------------KIL 374
++H N++ LL F P +SL+ F ++ K+
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLT 123
Query: 375 DWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
D +F +I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI DF LAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR 173
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFIFDQER----CKILDWSKRF---- 380
H N+V LLG C + G ++I EF +L +++ + K D K F
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 381 HIIC---GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+I A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 149 HLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 267 LFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELK 322
L E+ D+F I LG+G FG VY + I A+K L S++ ++G++ +L+
Sbjct: 3 LAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 62
Query: 323 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHI 382
E+ + S L+H N++++ + L+ EF P L + R D +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATF 119
Query: 383 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
+ A + Y H+ ++IHRD+K N+L+ KI+DFG
Sbjct: 120 MEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL--KNEVILFSKLQHRNLV 337
F+ +++G+G FG VYKG +E+ ++ + E + + E+ + S+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+ G ++ + +I E++ S D + L+ + I+ +G+ YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGS----ALDLLKPGPLEETYIATILREILKGLDYLHSE- 135
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
R IHRD+KA+NVLL + + K++DFG+A
Sbjct: 136 --RKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 336
D++ I+ +LG G FG V++ T G A K + E + ++ E+ S L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRF-HIICGTARGVMYLHQ 395
V L E ++IYEF+ L + D+ D + + +C +G+ ++H+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC---KGLCHMHE 273
Query: 396 DSRLRIIHRDLKASNVLLDQDMNP--KISDFGLA 427
++ +H DLK N++ + K+ DFGL
Sbjct: 274 NN---YVHLDLKPENIMFTTKRSNELKLIDFGLT 304
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 37/176 (21%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF----------------IFDQERCK 372
++H N++ LL F P +SL+ F I + K
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQ--K 121
Query: 373 ILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ D +F +I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR
Sbjct: 122 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Query: 278 DNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 336
D++ I+ +LG G FG V++ T G A K + E + ++ E+ S L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 396
V L E ++IYEF+ L + D+ D + + + +G+ ++H++
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--MRQVCKGLCHMHEN 168
Query: 397 SRLRIIHRDLKASNVLLDQDMNP--KISDFGLA 427
+ +H DLK N++ + K+ DFGL
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLT 198
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI FGLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR 173
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKI-----SEQGLKELKNEVILFSKLQ 332
D F KLG G FG V+ LV+ + ++R+ K S+ +++++ E+ + L
Sbjct: 22 DLFIFKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD 78
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVP-NKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
H N++K+ ++ E + L+ + Q R K L ++ +
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNP----KISDFGLARAF 430
Y H ++H+DLK N+L QD +P KI DFGLA F
Sbjct: 139 YFHSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELF 177
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 274 ANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL--KNEVILFSKL 331
A+ + F+ K+G+G FG V+KG Q++ ++ + E + + E+ + S+
Sbjct: 18 ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+ K G ++ + +I E++ S D LD ++ I+ +G+
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLD 133
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
YLH + + IHRD+KA+NVLL + K++DFG+A
Sbjct: 134 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI D GLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR 173
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 8 NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLAR 428
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 123
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLAR 428
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 124 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 23/169 (13%)
Query: 274 ANATDNFSINNKLGEGGFGPVYKGTLVDGQE-IAVKRLSKISEQGL--KELKNEVILFSK 330
+ DN+ I + +G G +G VY + ++ +A+K+++++ E + K + E+ + ++
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNR 81
Query: 331 LQHRNLVKLLGCCI-----QGEEKLLIYEFVPN---KSLDSFIF-DQERCKILDWSKRFH 381
L+ +++L I + +E ++ E + K + IF +E K
Sbjct: 82 LKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKT-------- 133
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
I+ G ++H+ IIHRDLK +N LL+QD + K+ DFGLAR
Sbjct: 134 ILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTI 179
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLAR 428
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 123
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLAR 428
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 124 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLA 427
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLA 427
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLAR 428
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI D GLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR 173
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLAR 428
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLAR 428
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDM-NP--KISDFGLA 427
GV YLH L+I H DLK N+ LLD+++ P KI DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLAR 428
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLAR 428
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 8 NVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLAR 428
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-------------IFDQERCKILD 375
++H N++ LL F P +SL+ F + + +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+I RG+ Y+H IIHRDLK SN+ +++D KI D GLAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR 173
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 25/168 (14%)
Query: 275 NATDNFSINNKLGEGGFGPV----YKGTLVDGQEIAVK-----RLSKISEQGL--KELKN 323
+ D++ + +LG G F V KGT G+E A K RLS S +G+ +E++
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSS-SRRGVSREEIER 64
Query: 324 EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHII 383
EV + +++H N++ L + +LI E V L F+ ++E L + +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFL 121
Query: 384 CGTARGVMYLHQDSRLRIIHRDLKASNV-LLDQDM-NPKIS--DFGLA 427
GV YLH RI H DLK N+ LLD+++ NP+I DFG+A
Sbjct: 122 KQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 25/165 (15%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVK-----RLSKISEQGL--KELKNEVI 326
D++ + +LG G F V KGT G+E A K RLS S +G+ +E++ EV
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSS-SRRGVSREEIEREVN 60
Query: 327 LFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGT 386
+ +++H N++ L + +LI E V L F+ ++E D + +F +
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESL-TEDEATQF--LKQI 117
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNV-LLDQDM-NPKIS--DFGLA 427
GV YLH RI H DLK N+ LLD+++ NP+I DFG+A
Sbjct: 118 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 34/171 (19%)
Query: 278 DNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKI------SEQGLKELKNEVILFSK 330
D + I +G G +G V + GQ++A+K++ +++ L+ELK +
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK----ILKH 110
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-----IFDQERCKILDWSKRF----- 380
+H N++ + K ++ VP S + + + +I+ S+
Sbjct: 111 FKHDNIIAI---------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV 161
Query: 381 -HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ + RG+ Y+H ++IHRDLK SN+L++++ KI DFG+AR
Sbjct: 162 RYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
+ + +LG G FG V G ++A+K + + S E E + L H LV+
Sbjct: 16 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 398
L G C + +I E++ N L +++ +E + + + YL
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 130
Query: 399 LRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ +HRDL A N L++ K+SDFGL+R
Sbjct: 131 -QFLHRDLAARNCLVNDQGVVKVSDFGLSR 159
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
+ + +LG G FG V G ++A+K + + S E E + L H LV+
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 398
L G C + +I E++ N L +++ +E + + + YL
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 139
Query: 399 LRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ +HRDL A N L++ K+SDFGL+R
Sbjct: 140 -QFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
+ + +LG G FG V G ++A+K + + S E E + L H LV+
Sbjct: 9 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 398
L G C + +I E++ N L +++ +E + + + YL
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 123
Query: 399 LRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ +HRDL A N L++ K+SDFGL+R
Sbjct: 124 -QFLHRDLAARNCLVNDQGVVKVSDFGLSR 152
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 286 LGEGGFGPVYKGTLVDGQ----EIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLL 340
+GEG FG V++G + + +A+K + ++E E + + H ++VKL+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G I +I E L SF+ Q R LD + + + YL R
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 401 IIHRDLKASNVLLDQDMNPKISDFGLAR 428
+HRD+ A NVL+ + K+ DFGL+R
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSR 187
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 277 TDNFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLS--KISEQGLKELKNEVILFSKLQH 333
TD + + +LG+G F V + + GQE A K ++ K+S + ++L+ E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
N+V+L + L+++ V L I +E D S H I V +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESVNHC 119
Query: 394 HQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLA 427
H + I+HRDLK N+LL + K++DFGLA
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 23/164 (14%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVKRLSK----ISEQGL--KELKNEVIL 327
D++ + +LG G F V KGT G+E A K + K S +G+ +E++ EV +
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
+++H N++ L + +LI E V L F+ ++E L + +
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQIL 139
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDM-NPKIS--DFGLA 427
GV YLH RI H DLK N+ LLD+++ NP+I DFG+A
Sbjct: 140 DGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL--KNEVILFSKLQHRNLV 337
F+ K+G+G FG V+KG Q++ ++ + E + + E+ + S+ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
K G ++ + +I E++ S D LD ++ I+ +G+ YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ IHRD+KA+NVLL + K++DFG+A
Sbjct: 145 K---IHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL--KNEVILFSKLQHRNLV 337
F+ K+G+G FG V+KG Q++ ++ + E + + E+ + S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
K G ++ + +I E++ S D LD ++ I+ +G+ YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ IHRD+KA+NVLL + K++DFG+A
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 275 NATDNFSINNKLGEGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVIL 327
N D + +LG G F V K L + KR +K S +G+ ++++ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 328 FSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
++QH N++ L + +LI E V L F+ ++E L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES---LTEEEATEFLKQIL 124
Query: 388 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLAR 428
GV YLH L+I H DLK N+ LLD+++ KI DFGLA
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
+ + +LG G FG V G ++A+K + + S E E + L H LV+
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 398
L G C + +I E++ N L +++ +E + + + YL
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 124
Query: 399 LRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ +HRDL A N L++ K+SDFGL+R
Sbjct: 125 -QFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL--KNEVILFSKLQHRNLV 337
F+ K+G+G FG V+KG Q++ ++ + E + + E+ + S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
K G ++ + +I E++ S D LD ++ I+ +G+ YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ IHRD+KA+NVLL + K++DFG+A
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
+ + +LG G FG V G ++A+K + + S E E + L H LV+
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 398
L G C + +I E++ N L +++ +E + + + YL
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 139
Query: 399 LRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ +HRDL A N L++ K+SDFGL+R
Sbjct: 140 -QFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 277 TDNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLS--KISEQGLKELKNEVILFSKLQH 333
TD + + +LG+G F V + + GQE A K ++ K+S + ++L+ E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
N+V+L + L+++ V L I +E D S H I V +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESVNHC 119
Query: 394 HQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLA 427
H + I+HRDLK N+LL + K++DFGLA
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
+ + +LG G FG V G ++A+K + + S E E + L H LV+
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 398
L G C + +I E++ N L +++ +E + + + YL
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 124
Query: 399 LRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ +HRDL A N L++ K+SDFGL+R
Sbjct: 125 -QFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 286 LGEGGFGPVYKGTLVDGQ----EIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLL 340
+GEG FG V++G + + +A+K + ++E E + + H ++VKL+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G I +I E L SF+ Q R LD + + + YL R
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 401 IIHRDLKASNVLLDQDMNPKISDFGLAR 428
+HRD+ A NVL+ + K+ DFGL+R
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSR 164
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 23/162 (14%)
Query: 286 LGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLLGCC 343
LG GGFG V++ VD A+KR+ + + +E + EV +KL+H +V+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCK---ILDW------------SKRFHIICGTAR 388
+ EK + P+ + C+ + DW S HI A
Sbjct: 73 L---EKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
V +LH ++HRDLK SN+ D K+ DFGL A
Sbjct: 130 AVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 35/161 (21%)
Query: 286 LGEGGFGPVYKGTLVDGQ---EIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 340
+G G +G V VDG+ ++A+K+L + SE K E+ L ++H N++ LL
Sbjct: 33 VGSGAYGAVCSA--VDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSF--------IFDQERCKILDWSK----RFH-IICGTA 387
F P+++LD F + K++ K R ++
Sbjct: 91 DV------------FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML 138
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+G+ Y+H IIHRDLK N+ +++D KI DFGLAR
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 18/175 (10%)
Query: 265 LPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 324
LPL TIA + ++G+G +G V+ G G+++AVK E + E
Sbjct: 27 LPLLVQRTIAK---QIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFR-ETE 81
Query: 325 VILFSKLQHRNLVKLLGCCIQGE----EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
+ ++H N++ + I+G + LI ++ N SL +D + LD
Sbjct: 82 IYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSML 137
Query: 381 HIICGTARGVMYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ + G+ +LH + + I HRDLK+ N+L+ ++ I+D GLA F
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 338
+ + +LG G FG V G ++A+K + + S E E + L H LV+
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 339 LLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 398
L G C + +I E++ N L +++ +E + + + YL
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 119
Query: 399 LRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ +HRDL A N L++ K+SDFGL+R
Sbjct: 120 -QFLHRDLAARNCLVNDQGVVKVSDFGLSR 148
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 276 ATDNFSINNKLGEGGFGPVYK------GTLVDGQEIAVKRLSKISEQGLKELKNEVILFS 329
AT + ++G G +G VYK G V + + V EV L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 330 KLQ---HRNLVKLLGCCIQGE-----EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFH 381
+L+ H N+V+L+ C + L++E V ++ L +++ D+ L
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKD 124
Query: 382 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
++ RG+ +LH + I+HRDLK N+L+ K++DFGLAR +
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 170
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 286 LGEGGFGPVYKGTLVD----GQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLL 340
+GEG FG V++G + +A+K + ++E E + + H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G I +I E L SF+ Q R LD + + + YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 401 IIHRDLKASNVLLDQDMNPKISDFGLAR 428
+HRD+ A NVL+ + K+ DFGL+R
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 286 LGEGGFGPVYKGTLVDGQ----EIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLL 340
+GEG FG V++G + + +A+K + ++E E + + H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G I +I E L SF+ Q R LD + + + YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 401 IIHRDLKASNVLLDQDMNPKISDFGLAR 428
+HRD+ A NVL+ + K+ DFGL+R
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 34/171 (19%)
Query: 278 DNFSINNKLGEGGFGPVYKGTL-VDGQEIAVKRLSKI------SEQGLKELKNEVILFSK 330
D + I +G G +G V + GQ++A+K++ +++ L+ELK +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK----ILKH 109
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-----IFDQERCKILDWSKRF----- 380
+H N++ + K ++ VP S + + + +I+ S+
Sbjct: 110 FKHDNIIAI---------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV 160
Query: 381 -HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ + RG+ Y+H ++IHRDLK SN+L++++ KI DFG+AR
Sbjct: 161 RYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 286 LGEGGFGPVYKGTLVDGQ----EIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLL 340
+GEG FG V++G + + +A+K + ++E E + + H ++VKL+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G I +I E L SF+ Q R LD + + + YL R
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 401 IIHRDLKASNVLLDQDMNPKISDFGLAR 428
+HRD+ A NVL+ + K+ DFGL+R
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSR 156
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 286 LGEGGFGPVYKGTLVDGQ----EIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLL 340
+GEG FG V++G + + +A+K + ++E E + + H ++VKL+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G I +I E L SF+ Q R LD + + + YL R
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 401 IIHRDLKASNVLLDQDMNPKISDFGLAR 428
+HRD+ A NVL+ + K+ DFGL+R
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSR 162
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 286 LGEGGFGPVYKGTLVDGQ----EIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLL 340
+GEG FG V++G + + +A+K + ++E E + + H ++VKL+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G I +I E L SF+ Q R LD + + + YL R
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 401 IIHRDLKASNVLLDQDMNPKISDFGLAR 428
+HRD+ A NVL+ + K+ DFGL+R
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSR 161
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 37/176 (21%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 328
TI + + + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF----------------IFDQERCK 372
++H N++ LL F P +SL+ F I + K
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQ--K 121
Query: 373 ILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ D +F +I RG+ Y+H IIHRDLK SN+ +++D KI DFGL R
Sbjct: 122 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR 173
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 337
+ +LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+++G C + E +L+ E L+ ++ K + + H + + G+ YL + +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 147
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+HRDL A NVLL KISDFGL++A
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 337
+ +LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+++G C + E +L+ E L+ ++ K + + H + + G+ YL + +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 147
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+HRDL A NVLL KISDFGL++A
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 277 TDNFSINNKLGEGGFGPVYKGTLVD---GQEIAVKRLSK--------ISEQGLKELKNEV 325
+ +S + LG G FG V+ T VD +E+ VK + K I + L ++ E+
Sbjct: 23 SQKYSTMSPLGSGAFGFVW--TAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 326 ILFSKLQHRNLVKLLGCCI-QGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
+ S+++H N++K+L QG +L++ + LD F F +R LD +I
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKH--GSGLDLFAF-IDRHPRLDEPLASYIFR 137
Query: 385 GTARGVMYLHQDSRLR-IIHRDLKASNVLLDQDMNPKISDFGLA 427
V YL RL+ IIHRD+K N+++ +D K+ DFG A
Sbjct: 138 QLVSAVGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 285 KLGEGGFGPVY----KGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 340
KLG G +G V K T V+ + I + R + +S +L EV + L H N++KL
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVE-RAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
L+ E L I + + +D + II GV YLH+ +
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLHKHN--- 156
Query: 401 IIHRDLKASNVLL---DQDMNPKISDFGLARAF 430
I+HRDLK N+LL ++D KI DFGL+ F
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 280 FSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLV 337
F LG G F V G+ AVK + K + +G + ++NE+ + K++H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
L L+ + V L I ++ D S +I V YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST---LIRQVLDAVYYLH--- 137
Query: 398 RLRIIHRDLKASNVLL---DQDMNPKISDFGLAR 428
R+ I+HRDLK N+L D++ ISDFGL++
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 286 LGEGGFGPVYKGTLVD----GQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLL 340
+GEG FG V++G + +A+K + ++E E + + H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G I +I E L SF+ Q R LD + + + YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 401 IIHRDLKASNVLLDQDMNPKISDFGLAR 428
+HRD+ A NVL+ + K+ DFGL+R
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ +C+ L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 337
+ +LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+++G C + E +L+ E L+ ++ K + + H + + G+ YL + +
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 145
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+HRDL A NVLL KISDFGL++A
Sbjct: 146 ---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 175
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 337
+ +LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+++G C + E +L+ E L+ ++ K + + H + + G+ YL + +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+HRDL A NVLL KISDFGL++A
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 337
+ +LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+++G C + E +L+ E L+ ++ K + + H + + G+ YL + +
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 125
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+HRDL A NVLL KISDFGL++A
Sbjct: 126 ---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 155
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 280 FSINNKLGEGGFGPVYKGTLVD-GQEIAVKRL-SKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG GGFG V + D G+++A+K+ ++S + + E+ + KL H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 338 KL------LGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
L + LL E+ L ++ E C L ++ + +
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 392 YLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF 430
YLH++ RIIHRDLK N++L Q + KI D G A+
Sbjct: 136 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL 174
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 337
+ +LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+++G C + E +L+ E L+ ++ K + + H + + G+ YL + +
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 127
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+HRDL A NVLL KISDFGL++A
Sbjct: 128 ---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 157
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 337
+ +LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+++G C + E +L+ E L+ ++ K + + H + + G+ YL + +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 131
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+HRDL A NVLL KISDFGL++A
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 283 NNKLGEGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 337
+ +LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+++G C + E +L+ E L+ ++ K + + H + + G+ YL + +
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 137
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+HRDL A NVLL KISDFGL++A
Sbjct: 138 ---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 167
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 280 FSINNKLGEGGFGPVYKGTLVD-GQEIAVKRL-SKISEQGLKELKNEVILFSKLQHRNLV 337
+ + +LG GGFG V + D G+++A+K+ ++S + + E+ + KL H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 338 KL------LGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
L + LL E+ L ++ E C L ++ + +
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 392 YLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF 430
YLH++ RIIHRDLK N++L Q + KI D G A+
Sbjct: 137 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL 175
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 286 LGEGGFGPVYKGTLVD----GQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLL 340
+GEG FG V++G + +A+K + ++E E + + H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G I +I E L SF+ Q R LD + + + YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 401 IIHRDLKASNVLLDQDMNPKISDFGLAR 428
+HRD+ A NVL+ K+ DFGL+R
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSR 159
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 286 LGEGGFGPVYKGTLVDGQE----IAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLL 340
+GEG FG V++G + + +A+K + ++E E + + H ++VKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G I +I E L SF+ Q R LD + + + YL R
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 401 IIHRDLKASNVLLDQDMNPKISDFGLAR 428
+HRD+ A NVL+ + K+ DFGL+R
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSR 539
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSK---ISEQGLKELKNEVILF 328
I ++F ++ LG+G FG V+ Q A+K L K + + ++ E +
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 329 SKLQHRNLVKLLGCCIQGEEKLL-IYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
S + + C Q +E L + E++ L ++ + C D S+
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEII 129
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
G+ +LH I++RDLK N+LLD+D + KI+DFG+ +
Sbjct: 130 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 283 NNKLGEGGFGPVYKG--TLVDGQEIAVKRLSK--ISEQGLK-ELKNEVILFSKLQHRNLV 337
+ +LG G FG V KG + + ++ K ++ LK EL E + +L + +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+++G C + E +L+ E L+ ++ K + + H + + G+ YL + +
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 490
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+HRDL A NVLL KISDFGL++A
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 520
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 283 NNKLGEGGFGPVYKG--TLVDGQEIAVKRLSK--ISEQGLK-ELKNEVILFSKLQHRNLV 337
+ +LG G FG V KG + + ++ K ++ LK EL E + +L + +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
+++G C + E +L+ E L+ ++ K + + H + + G+ YL + +
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 489
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+HRDL A NVLL KISDFGL++A
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 519
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 277 TDNFSINNKLGEGGFGPVY----KGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ 332
+D F + ++LG G VY KGT + A+K L K ++ K ++ E+ + +L
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGT---QKPYALKVLKKTVDK--KIVRTEIGVLLRLS 106
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 392
H N++KL E L+ E V L I ++ D + I V Y
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL---EAVAY 163
Query: 393 LHQDSRLRIIHRDLKASNVLLDQ---DMNPKISDFGLAR 428
LH++ I+HRDLK N+L D KI+DFGL++
Sbjct: 164 LHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSK 199
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 285 KLGEGGFGPVYKGTLVD-GQEIAVKR-LSKISEQGLKELK-NEVILFSKLQHRNLVKLLG 341
K+GEG +G V+K D GQ +A+K+ L + +K++ E+ + +L+H NLV LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTARGVMYLHQD 396
+ L++E+ + L + K + W T + V + H+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCHKH 121
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ IHRD+K N+L+ + K+ DFG AR
Sbjct: 122 N---CIHRDVKPENILITKHSVIKLCDFGFAR 150
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 284 NKLGEGGFGPV-YKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC 342
KLGEGGF V L DG A+KR+ +Q +E + E + H N+++L+
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 343 CIQ----GEEKLLIYEFVPNKSLDSFIFDQERCK----ILDWSKRFHIICGTARGVMYLH 394
C++ E L+ F +L + I ER K L + ++ G RG+ +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEI---ERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
HRDLK +N+LL + P + D G
Sbjct: 152 AKG---YAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 21/121 (17%)
Query: 318 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLL--IYEFVPN------KSLDSFIFDQE 369
++++ E+ + KL H N+VKL+ E L ++E V +L DQ
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 370 RCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 429
R D K G+ YLH +IIHRD+K SN+L+ +D + KI+DFG++
Sbjct: 140 RFYFQDLIK----------GIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 430 F 430
F
Sbjct: 187 F 187
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 265 LPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGL---KEL 321
LP T+A ++ +G+G +G V++G+ G+ +AVK S E+ EL
Sbjct: 27 LPFLVQRTVAR---QITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETEL 82
Query: 322 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFH 381
N V+L +H N++ + + + + ++D + LD
Sbjct: 83 YNTVML----RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR 138
Query: 382 IICGTARGVMYLH-----QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
I+ A G+ +LH + I HRDLK+ N+L+ ++ I+D GLA
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSK---ISEQGLKELKNEVILF 328
I ++F ++ LG+G FG V+ Q A+K L K + + ++ E +
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 329 SKLQHRNLVKLLGCCIQGEEKLL-IYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
S + + C Q +E L + E++ L ++ + C D S+
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEII 128
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
G+ +LH I++RDLK N+LLD+D + KI+DFG+ +
Sbjct: 129 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 286 LGEGGFGPVYKGTLVDGQE----IAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLL 340
+GEG FG V++G + + +A+K + ++E E + + H ++VKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G I +I E L SF+ Q R LD + + + YL R
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 401 IIHRDLKASNVLLDQDMNPKISDFGLAR 428
+HRD+ A NVL+ K+ DFGL+R
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSR 539
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARV 173
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 277 TDNFSINNKLGEGGFGP----VYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ 332
+D + + +G G + V+K T E AVK + K +E++ IL Q
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEIE---ILLRYGQ 79
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 392
H N++ L G+ L+ E + L I Q+ + S H I + V Y
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTI---GKTVEY 136
Query: 393 LHQDSRLRIIHRDLKASNVL-LDQDMNP---KISDFGLARAF 430
LH ++HRDLK SN+L +D+ NP +I DFG A+
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 277 TDNFSINNKLGEGGFGPVY--KGTLVDGQEIAVKRLSKISEQGLKE---LKNEVILFSKL 331
+D + KLG G +G V K L G E A+K + K S L +EV + +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSL-DSFIFDQERCKILDWSKRFHIICGTARGV 390
H N++KL L+ E L D I Q+ ++ ++ GT
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT--- 118
Query: 391 MYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF 430
YLH+ + I+HRDLK N+LL+ +D KI DFGL+ F
Sbjct: 119 -YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 157
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGL---KELKNEVILFSKLQHRNLVKLLGC 342
+G+G +G V++G+ G+ +AVK S E+ EL N V+L +H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 343 CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD-----S 397
+ + + ++D + LD I+ A G+ +LH +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ I HRDLK+ N+L+ ++ I+D GLA
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 12/168 (7%)
Query: 268 FELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEI--AVKRLSKISEQGLKELKNEV 325
F+ +T + +++ N +G G +G V K + G I A K++ K + + K E+
Sbjct: 16 FQGSTKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI 74
Query: 326 ILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICG 385
+ L H N+++L + L+ E L + + ++ S I+
Sbjct: 75 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK---RVFRESDAARIMKD 131
Query: 386 TARGVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAF 430
V Y H +L + HRDLK N L D K+ DFGLA F
Sbjct: 132 VLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 176
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGL---KELKNEVILFSKLQHRNLVKLLGC 342
+G+G +G V++G+ G+ +AVK S E+ EL N V+L +H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 343 CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD-----S 397
+ + + ++D + LD I+ A G+ +LH +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ I HRDLK+ N+L+ ++ I+D GLA
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 277 TDNFSINNKLGEGGFGPVY--KGTLVDGQEIAVKRLSKISEQGLK---ELKNEVILFSKL 331
+D + KLG G +G V K L G E A+K + K S L +EV + +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSL-DSFIFDQERCKILDWSKRFHIICGTARGV 390
H N++KL L+ E L D I Q+ ++ ++ GT
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT--- 135
Query: 391 MYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF 430
YLH+ + I+HRDLK N+LL+ +D KI DFGL+ F
Sbjct: 136 -YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 174
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 277 TDNFSINNKLGEGGFGP----VYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ 332
+D + + +G G + V+K T E AVK + K +E++ IL Q
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEIE---ILLRYGQ 79
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 392
H N++ L G+ L+ E + L I Q+ + S H I T V Y
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT---VEY 136
Query: 393 LHQDSRLRIIHRDLKASNVL-LDQDMNP---KISDFGLARAF 430
LH ++HRDLK SN+L +D+ NP +I DFG A+
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 24/159 (15%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL----- 339
LG GG G V+ D + +A+K++ Q +K E+ + +L H N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 340 ---------LGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+G + ++ E++ + E+ +L+ R + RG+
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL----EQGPLLEEHARL-FMYQLLRGL 133
Query: 391 MYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLAR 428
Y+H + ++HRDLK +N+ ++ +D+ KI DFGLAR
Sbjct: 134 KYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLAR 169
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 14/157 (8%)
Query: 279 NFSINNKLGEGGFGPVY---KGTLVD-GQEIAVKRLSKISEQGLKEL--KNEVILFSKLQ 332
+F + LG+G FG V+ K T D G A+K L K + + + K E + + +
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
H +VKL Q E KL LI +F+ + D F + + +F++ A G+
Sbjct: 89 HPFVVKL-HYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYL-AELALGLD 144
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+LH L II+RDLK N+LLD++ + K++DFGL++
Sbjct: 145 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 178
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 155
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLARV 181
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 265 LPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 324
LPL TIA + +G+G FG V++G G+E+AVK S E+ + E
Sbjct: 19 LPLLVQRTIAR---TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAE 73
Query: 325 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
+ L+H N++ + + V + +FD + +
Sbjct: 74 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 133
Query: 385 GTARGVMYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
TA G+ +LH + + I HRDLK+ N+L+ ++ I+D GLA
Sbjct: 134 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 265 LPLFELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 324
LPL TIA + +G+G FG V++G G+E+AVK S E+ + E
Sbjct: 32 LPLLVQRTIAR---TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAE 86
Query: 325 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
+ L+H N++ + + V + +FD + +
Sbjct: 87 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 146
Query: 385 GTARGVMYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
TA G+ +LH + + I HRDLK+ N+L+ ++ I+D GLA
Sbjct: 147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 274 ANATDNFSINNKLGEGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ 332
N F LG G F V+ + G+ A+K + K L+NE+ + K++
Sbjct: 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK 64
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 392
H N+V L L+ + V L I ++ D S +I V Y
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVKY 121
Query: 393 LHQDSRLRIIHRDLKASNVL-LDQDMNPK--ISDFGLAR 428
LH++ I+HRDLK N+L L + N K I+DFGL++
Sbjct: 122 LHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK 157
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 149
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 167
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLARV 193
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V V +A+K++S Q + E+ + + +H N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN---VLH 167
Query: 404 RDLKASNVLLDQDMNPKISDFGLAR 428
RDLK SN+L++ + KI DFGLAR
Sbjct: 168 RDLKPSNLLINTTCDLKICDFGLAR 192
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEI----AVKRLSKIS----EQGLKELKNEVILFS 329
+NF + LG G +G V+ + G + A+K L K + + + + E +
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 330 KLQHRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTAR 388
++ + L Q E KL LI +++ L + + +ER I G
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT----EHEVQIYVGEI- 168
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
V+ L +L II+RD+K N+LLD + + ++DFGL++ F
Sbjct: 169 -VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKLLGCC 343
+GEG +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V V+ +A+K++S Q + E+ + +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 149
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLARV 175
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V V+ +A+K++S Q + E+ + +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 149
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRLSK---ISEQGLKELKNEVILFSKLQH 333
D+F I +G+G FG V D +++ A+K ++K + ++ + E+ + L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI-----FDQERCKILDWSKRFHIICGTAR 388
LV L E+ ++ + + L + F +E K+ IC
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF--------ICELVM 126
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ YL RIIHRD+K N+LLD+ + I+DF +A
Sbjct: 127 ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIA 162
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 12/165 (7%)
Query: 271 ATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEI--AVKRLSKISEQGLKELKNEVILF 328
+T + +++ N +G G +G V K + G I A K++ K + + K E+ +
Sbjct: 2 STKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM 60
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTAR 388
L H N+++L + L+ E L + + ++ S I+
Sbjct: 61 KSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK---RVFRESDAARIMKDVLS 117
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAF 430
V Y H +L + HRDLK N L D K+ DFGLA F
Sbjct: 118 AVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 277 TDNFSINNKLGEGGFGP----VYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ 332
TD + + +G G + ++K T E AVK + K +E++ IL Q
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKAT---NMEFAVKIIDKSKRDPTEEIE---ILLRYGQ 74
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 392
H N++ L G+ ++ E + L I Q K + ++ + V Y
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEY 131
Query: 393 LHQDSRLRIIHRDLKASNVL-LDQDMNP---KISDFGLAR 428
LH ++HRDLK SN+L +D+ NP +I DFG A+
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 145
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ + + ++ + + L + + RG+ Y+H + ++H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 167
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARV 193
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 152
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 153
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARV 179
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 144
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARV 170
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 145
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 152
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVDGQE---IAVKRLSKISEQGLKELKNEVILFS 329
I + +D + + +G G FG + D Q +AVK + + E+ + +K E+I
Sbjct: 14 IMHDSDRYELVKDIGAGNFG--VARLMRDKQANELVAVKYIER-GEKIDENVKREIINHR 70
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
L+H N+V+ + ++ E+ L I + R + RF G
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS--EDEARF-FFQQLISG 127
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARA 429
V Y H +++ HRDLK N LLD P KI+DFG ++A
Sbjct: 128 VSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA 166
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 277 TDNFSINNKLGEGGFGP----VYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ 332
TD + + +G G + ++K T E AVK + K +E++ IL Q
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKAT---NXEFAVKIIDKSKRDPTEEIE---ILLRYGQ 74
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 392
H N++ L G+ ++ E L I Q K + ++ + V Y
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ---KFFSEREASAVLFTITKTVEY 131
Query: 393 LHQDSRLRIIHRDLKASNVL-LDQDMNP---KISDFGLAR 428
LH ++HRDLK SN+L +D+ NP +I DFG A+
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 69/176 (39%), Gaps = 24/176 (13%)
Query: 270 LATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQG-----------L 318
+A + +++ + G +G V G +G +A+KR+ G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 319 KELKNEVILFSKLQHRNLVKLLGCCIQGEE----KLLIYEFVPNKSLDSFIFDQERCKIL 374
K + E+ L + H N++ L + EE KL + + L I DQ
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 375 DWSKRF--HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ F HI+ G LH ++HRDL N+LL + + I DF LAR
Sbjct: 134 QHIQYFMYHILLG-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 69/176 (39%), Gaps = 24/176 (13%)
Query: 270 LATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQG-----------L 318
+A + +++ + G +G V G +G +A+KR+ G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 319 KELKNEVILFSKLQHRNLVKLLGCCIQGEE----KLLIYEFVPNKSLDSFIFDQERCKIL 374
K + E+ L + H N++ L + EE KL + + L I DQ
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 375 DWSKRF--HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ F HI+ G LH ++HRDL N+LL + + I DF LAR
Sbjct: 134 QHIQYFMYHILLG-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 273 IANATDNFSINNKLGEGGFGPVYK-GTLVDGQEIAVKRL--SKISEQGLKELKNEVILFS 329
+ + +++ + +G G +G K DG+ + K L ++E + L +EV L
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 330 KLQHRNLVKLLGCCIQGEEKLL--IYEFVPNKSLDSFIFD--QERCKILDWSKRFHIICG 385
+L+H N+V+ I L + E+ L S I +ER + LD ++
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQ 119
Query: 386 TARGVMYLHQ--DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H+ D ++HRDLK +NV LD N K+ DFGLAR
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 273 IANATDNFSINNKLGEGGFGPVYK-GTLVDGQEIAVKRL--SKISEQGLKELKNEVILFS 329
+ + +++ + +G G +G K DG+ + K L ++E + L +EV L
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 330 KLQHRNLVKLLGCCIQGEEKLL--IYEFVPNKSLDSFIFD--QERCKILDWSKRFHIICG 385
+L+H N+V+ I L + E+ L S I +ER + LD ++
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQ 119
Query: 386 TARGVMYLHQ--DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H+ D ++HRDLK +NV LD N K+ DFGLAR
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDG----QEIAVKRLSKISEQGLKEL--KNEVILFSKLQ 332
F + LG+G FG V+ + G Q A+K L K + + + K E + ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
H +VKL Q E KL LI +F+ + D F + + +F++ A +
Sbjct: 85 HPFIVKL-HYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYL-AELALALD 140
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+LH L II+RDLK N+LLD++ + K++DFGL++
Sbjct: 141 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 273 IANATDNFSINNKLGEGGFGPVYK-GTLVDGQEIAVKRL--SKISEQGLKELKNEVILFS 329
+ + +++ + +G G +G K DG+ + K L ++E + L +EV L
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 330 KLQHRNLVKLLGCCIQGEEKLL--IYEFVPNKSLDSFIFD--QERCKILDWSKRFHIICG 385
+L+H N+V+ I L + E+ L S I +ER + LD ++
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQ 119
Query: 386 TARGVMYLHQ--DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+ H+ D ++HRDLK +NV LD N K+ DFGLAR
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 286 LGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 343
+GEG +G V ++ +A++++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 404 RDLKASNVLLDQDMNPKISDFGLARA 429
RDLK SN+LL+ + KI DFGLAR
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 336
D + I +LG G FG V++ G+ K ++ +KNE+ + ++L H L
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 337 VKLLGCCIQGEEKLLIYEFVPNKSLDSFI----FDQERCKILDWSKRFHIICGTARGVMY 392
+ L E +LI EF+ L I + +++++ ++ G+ +
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ------ACEGLKH 164
Query: 393 LHQDSRLRIIHRDLKASNVLLD--QDMNPKISDFGLA 427
+H+ S I+H D+K N++ + + + KI DFGLA
Sbjct: 165 MHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 33/194 (17%)
Query: 250 ENNRETDQVQNMDLELPLFELATIANATDN--FSINNKLGEGGFGPVYKG----TLVDGQ 303
E N++ D ++ + E + + D + ++G G F VYKG T V+
Sbjct: 3 ERNQQQDDIEEL-------ETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVA 55
Query: 304 --EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC---CIQGEE-KLLIYEFVP 357
E+ ++L+K Q KE E LQH N+V+ ++G++ +L+ E
Sbjct: 56 WCELQDRKLTKSERQRFKE---EAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXT 112
Query: 358 NKSLDSFI--FDQERCKIL-DWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD 414
+ +L +++ F + K+L W ++ +G+ +LH + IIHRDLK N+ +
Sbjct: 113 SGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHTRTP-PIIHRDLKCDNIFIT 165
Query: 415 QDMNP-KISDFGLA 427
KI D GLA
Sbjct: 166 GPTGSVKIGDLGLA 179
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQE----IAVKRLSKI----SEQGLKELKNEVILFSKL 331
F + LG+GG+G V++ V G A+K L K + + K E + ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H +V L+ G + LI E++ L ER I + + +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALG 135
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+LHQ II+RDLK N++L+ + K++DFGL +
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQE----IAVKRLSKI----SEQGLKELKNEVILFSKL 331
F + LG+GG+G V++ V G A+K L K + + K E + ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H +V L+ G + LI E++ L ER I + + +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALG 135
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+LHQ II+RDLK N++L+ + K++DFGL +
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LKE++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+ P + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+++DQ K++DFGLA+
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 302 GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSL 361
G + + + ++ E LKE+ IL H N+++L L+++ + L
Sbjct: 42 GGSFSAEEVQELREATLKEVD---ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 98
Query: 362 DSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKI 421
F + E+ + + R I+ + LH +L I+HRDLK N+LLD DMN K+
Sbjct: 99 --FDYLTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKL 152
Query: 422 SDFGLA 427
+DFG +
Sbjct: 153 TDFGFS 158
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 302 GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSL 361
G + + + ++ E LKE+ IL H N+++L L+++ + L
Sbjct: 55 GGSFSAEEVQELREATLKEVD---ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 362 DSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKI 421
F + E+ + + R I+ + LH +L I+HRDLK N+LLD DMN K+
Sbjct: 112 --FDYLTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKL 165
Query: 422 SDFGLA 427
+DFG +
Sbjct: 166 TDFGFS 171
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 302 GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSL 361
G + + + ++ E LKE+ IL H N+++L L+++ + L
Sbjct: 55 GGSFSAEEVQELREATLKEVD---ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 362 DSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKI 421
F + E+ + + R I+ + LH +L I+HRDLK N+LLD DMN K+
Sbjct: 112 --FDYLTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKL 165
Query: 422 SDFGLA 427
+DFG +
Sbjct: 166 TDFGFS 171
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDG----QEIAVKRLSKISEQGLKEL--KNEVILFSKLQ 332
F + LG+G FG V+ + G Q A+K L K + + + K E + ++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
H +VKL Q E KL LI +F+ + D F + + +F++ A +
Sbjct: 86 HPFIVKL-HYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYL-AELALALD 141
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+LH L II+RDLK N+LLD++ + K++DFGL++
Sbjct: 142 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 175
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDG----QEIAVKRLSKISEQGLKEL--KNEVILFSKLQ 332
F + LG+G FG V+ + G Q A+K L K + + + K E + ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 333 HRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
H +VKL Q E KL LI +F+ + D F + + +F++ A +
Sbjct: 85 HPFIVKL-HYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYL-AELALALD 140
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+LH L II+RDLK N+LLD++ + K++DFGL++
Sbjct: 141 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 294 VYKGTLVDGQEIAVKRLS----KISEQGLKELKNEV-----ILFSKLQHRNLVKLLGCCI 344
V++ T G E AVK + ++S + L+E++ IL H +++ L+
Sbjct: 114 VHRAT---GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170
Query: 345 QGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHR 404
L+++ + L F + E+ + + R I+ V +LH ++ I+HR
Sbjct: 171 SSSFMFLVFDLMRKGEL--FDYLTEKVALSEKETR-SIMRSLLEAVSFLHANN---IVHR 224
Query: 405 DLKASNVLLDQDMNPKISDFGLA 427
DLK N+LLD +M ++SDFG +
Sbjct: 225 DLKPENILLDDNMQIRLSDFGFS 247
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 274 ANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKIS-------EQGLKELKNEVI 326
A + + + LGEG +G V + ++D + + + + + G +K E+
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKVKE--VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQ 58
Query: 327 LFSKLQHRNLVKLLGCCIQGEEKLLIYEFVP------NKSLDSFIFDQERCKILDWSKRF 380
L +L+H+N+++L+ + EEK +Y + + LDS ++R + F
Sbjct: 59 LLRRLRHKNVIQLVDV-LYNEEKQKMYMVMEYCVCGMQEMLDSV--PEKRFPVCQAHGYF 115
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
C G+ YLH I+H+D+K N+LL KIS G+A A
Sbjct: 116 ---CQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 282 INNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKL 339
+++ LG+G V++G G A+K + IS +++ E + KL H+N+VKL
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 340 LGCCIQGE----EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
I+ E K+LI EF P SL + + + L S+ ++ G+ +L +
Sbjct: 73 F--AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 396 DSRLRIIHRDLKASNVLL----DQDMNPKISDFGLAR 428
+ I+HR++K N++ D K++DFG AR
Sbjct: 131 NG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 122
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 123 VRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGL---KELKNEVILFSKLQHRNLVKLLGC 342
+G+G +G V++G L G+ +AVK S EQ E+ N V+L +H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLL----RHDNILGFIAS 70
Query: 343 CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD-----S 397
+ + + ++D + + L+ + A G+ +LH +
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQG 130
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ I HRD K+ NVL+ ++ I+D GLA
Sbjct: 131 KPAIAHRDFKSRNVLVKSNLQCCIADLGLA 160
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+VP + S + + + + RF+ A+ V+
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFY----AAQIVLTF 155
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+VP + S + + + + RF+ A+ V
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFY----AAQIV 144
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVDGQE---IAVKRLSKISEQGLKELKNEVILFS 329
I + +D + + +G G FG + D Q +AVK + + E+ +K E+I
Sbjct: 14 IMHDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER-GEKIAANVKREIINHR 70
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
L+H N+V+ + ++ E+ L I + R + RF G
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS--EDEARF-FFQQLISG 127
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARA 429
V Y H +++ HRDLK N LLD P KI DFG +++
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS 166
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+VP + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 16/152 (10%)
Query: 285 KLGEGGFGPVYKGTL-VDGQEIAVKRL-SKISEQGLKELKNEV-ILFSKLQHRNLVKLLG 341
++G G +G V K GQ +AVKR+ S + E+ K+L ++ ++ +V+ G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 342 CCIQGEEKLLIYEFVPNKSLDSF------IFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+ + + E + + S D F + D ++ I T + + +L +
Sbjct: 89 ALFREGDCWICMELM-STSFDKFYKYVYSVLDD----VIPEEILGKITLATVKALNHLKE 143
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ L+IIHRD+K SN+LLD+ N K+ DFG++
Sbjct: 144 N--LKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+VP + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 33/172 (19%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKIS---EQGLKELKNEVILF 328
I ++FS++ +G GGFG VY D G+ A+K L K +QG NE I+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 329 SKLQHRNLVKLLGC----CIQGEEKLLIYEF-VPNKSLDSFIFDQERCKILDWSKRFHII 383
S LV C C+ Y F P+K SFI D L + H +
Sbjct: 244 S------LVSTGDCPFIVCMS-------YAFHTPDKL--SFILDLMNGGDLHYHLSQHGV 288
Query: 384 CGTARGVMYL--------HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
A Y H +R +++RDLK +N+LLD+ + +ISD GLA
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LKE++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+ P + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+++DQ +++DFGLA+
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK 189
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 33/172 (19%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKIS---EQGLKELKNEVILF 328
I ++FS++ +G GGFG VY D G+ A+K L K +QG NE I+
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 329 SKLQHRNLVKLLGC----CIQGEEKLLIYEF-VPNKSLDSFIFDQERCKILDWSKRFHII 383
S LV C C+ Y F P+K SFI D L + H +
Sbjct: 243 S------LVSTGDCPFIVCMS-------YAFHTPDKL--SFILDLMNGGDLHYHLSQHGV 287
Query: 384 CGTARGVMYL--------HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
A Y H +R +++RDLK +N+LLD+ + +ISD GLA
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 33/172 (19%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKIS---EQGLKELKNEVILF 328
I ++FS++ +G GGFG VY D G+ A+K L K +QG NE I+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 329 SKLQHRNLVKLLGC----CIQGEEKLLIYEF-VPNKSLDSFIFDQERCKILDWSKRFHII 383
S LV C C+ Y F P+K SFI D L + H +
Sbjct: 244 S------LVSTGDCPFIVCMS-------YAFHTPDKL--SFILDLMNGGDLHYHLSQHGV 288
Query: 384 CGTARGVMYL--------HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
A Y H +R +++RDLK +N+LLD+ + +ISD GLA
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 33/172 (19%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKIS---EQGLKELKNEVILF 328
I ++FS++ +G GGFG VY D G+ A+K L K +QG NE I+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 329 SKLQHRNLVKLLGC----CIQGEEKLLIYEF-VPNKSLDSFIFDQERCKILDWSKRFHII 383
S LV C C+ Y F P+K SFI D L + H +
Sbjct: 244 S------LVSTGDCPFIVCMS-------YAFHTPDKL--SFILDLMNGGDLHYHLSQHGV 288
Query: 384 CGTARGVMYL--------HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
A Y H +R +++RDLK +N+LLD+ + +ISD GLA
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+VP + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+VP + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F +G G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+VP + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ K++DFG A+
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+VP + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+VP + S + + + + RF+ A+ V+
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 140
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 141 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 175
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+VP + S + + + + RF+ A+ V+
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 155
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 282 INNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
+ +G+G FG V++G G+E+AVK S E+ + E+ L+H N++ +
Sbjct: 8 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIA 65
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD----- 396
+ V + +FD + + TA G+ +LH +
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ I HRDLK+ N+L+ ++ I+D GLA
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 282 INNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKL 339
+++ LG+G V++G G A+K + IS +++ E + KL H+N+VKL
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 340 LGCCIQGE----EKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
I+ E K+LI EF P SL + + + L S+ ++ G+ +L +
Sbjct: 73 F--AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 396 DSRLRIIHRDLKASNVLL----DQDMNPKISDFGLAR 428
+ I+HR++K N++ D K++DFG AR
Sbjct: 131 NG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+VP + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEI--AVKRLSKISEQGLKELKNEV----ILFSKLQ 332
+F +G+G FG V +E+ AVK L K + KE K+ + +L ++
Sbjct: 39 DFHFLKVIGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 333 HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 392
H LV L ++ + +++ L + +ERC L+ RF+ A + Y
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGEL-FYHLQRERC-FLEPRARFYA-AEIASALGY 154
Query: 393 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
LH L I++RDLK N+LLD + ++DFGL +
Sbjct: 155 LHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK 187
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+VP + S + + + + RF+ A+ V
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 144
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+VP + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ QG K KN E+ + KL H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 282 INNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
+ +G+G FG V++G G+E+AVK S E+ + E+ L+H N++ +
Sbjct: 10 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIA 67
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD----- 396
+ V + +FD + + TA G+ +LH +
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ I HRDLK+ N+L+ ++ I+D GLA
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+VP + S + + + + RF+ A+ V+
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 155
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 282 INNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
+ +G+G FG V++G G+E+AVK S E+ + E+ L+H N++ +
Sbjct: 13 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIA 70
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD----- 396
+ V + +FD + + TA G+ +LH +
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ I HRDLK+ N+L+ ++ I+D GLA
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Query: 269 ELATIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLK---ELKNE 324
+ T ++ +D + + LG GG V+ L D +++AVK L + + E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 325 VILFSKLQHRNLVKLLGC----CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
+ L H +V + G ++ E+V +L + + + +
Sbjct: 63 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAI 119
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+I + + + HQ+ IIHRD+K +N+L+ K+ DFG+ARA
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAI 166
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ QG K KN E+ + KL H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+VP + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+VP + S + + + + RF+ A+ V
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 152
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 282 INNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 341
+ +G+G FG V++G G+E+AVK S E+ + E+ L+H N++ +
Sbjct: 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIA 64
Query: 342 CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD----- 396
+ V + +FD + + TA G+ +LH +
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 397 SRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ I HRDLK+ N+L+ ++ I+D GLA
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+VP + S + + + + RF+ A+ V
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 152
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+VP + S + + + + RF+ A+ V
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 152
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 122
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 123 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 14/162 (8%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVDGQE---IAVKRLSKISEQGLKELKNEVILFS 329
I + +D + + +G G FG + D Q +AVK + + E+ + +K E+I
Sbjct: 13 IMHDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHR 69
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
L+H N+V+ + ++ E+ L I + R + RF G
Sbjct: 70 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS--EDEARF-FFQQLISG 126
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARA 429
V Y H +++ HRDLK N LLD P KI DFG +++
Sbjct: 127 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS 165
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ QG K KN E+ + KL H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 122
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 123 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 110
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 168
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 169 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 199
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+VP + S + + + + RF+ A+ V
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 172
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 174
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 175 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 127
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 128 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 141
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 142 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 126
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 127 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 127
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 128 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 127
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 128 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 141
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 142 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+ P + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+++DQ K++DFG A+
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 125
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 126 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 159
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 142
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 143 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 142
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 143 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 142
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 143 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 118
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 176
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 177 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 320 ELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF-----IFDQERCKIL 374
+ KNE+ + + +++ + G +E +IYE++ N S+ F + D+ +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 375 DWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 425
II Y+H + I HRD+K SN+L+D++ K+SDFG
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFG 197
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 174
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 175 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 161
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 219
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 220 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 250
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 120
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 178
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 179 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 155
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 156 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 154
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 155 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 161
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 162 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 195
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN------EVILFS 329
+ + LG GGFG VY G V D +A+K + K IS+ G EL N EV+L
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPNGTRVPMEVVLLK 109
Query: 330 KLQH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
K+ +++LL + + +LI E P D F F ER + + R
Sbjct: 110 KVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVL 167
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 168 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 155
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 156 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 87
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 145
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 146 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 176
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 155
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 156 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 154
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 155 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Query: 269 ELATIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLK---ELKNE 324
+ T ++ +D + + LG GG V+ L D +++AVK L + + E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 325 VILFSKLQHRNLVKLLGC----CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
+ L H +V + G ++ E+V +L + + + +
Sbjct: 63 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAI 119
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+I + + + HQ+ IIHRD+K +N+++ K+ DFG+ARA
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 155
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 156 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 169
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 170 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 344 I-QGEEKLLIY-----EFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
GE+K ++Y ++VP + L + R + Y+H
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 154
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 155 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 154
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 155 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E P D F F ER + + R
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 149
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 150 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 183
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Query: 269 ELATIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLK---ELKNE 324
+ T ++ +D + + LG GG V+ L D +++AVK L + + E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 325 VILFSKLQHRNLVKLLGC----CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
+ L H +V + G ++ E+V +L + + + +
Sbjct: 63 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAI 119
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+I + + + HQ+ IIHRD+K +N+++ K+ DFG+ARA
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 153
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 154 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 184
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK-----ISEQ-GLKELKNEVILFS 329
T F K+G G FG V+K +DG A+KR K + EQ L+E+ +L
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 68
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFH---IICGT 386
QH ++V+ + + L+ E+ SL I E +I+ + K ++
Sbjct: 69 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQV 124
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
RG+ Y+H + ++H D+K SN+ + + P
Sbjct: 125 GRGLRYIHS---MSLVHMDIKPSNIFISRTSIP 154
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 90
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 148
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 149 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 179
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 152
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 153 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN------EVILFS 329
+ + LG GGFG VY G V D +A+K + K IS+ G EL N EV+L
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPNGTRVPMEVVLLK 114
Query: 330 KLQH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
K+ +++LL + + +LI E P D F F ER + + R
Sbjct: 115 KVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVL 172
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 173 EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 208
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK-----ISEQ-GLKELKNEVILFS 329
T F K+G G FG V+K +DG A+KR K + EQ L+E+ +L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 66
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFH---IICGT 386
QH ++V+ + + L+ E+ SL I E +I+ + K ++
Sbjct: 67 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQV 122
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
RG+ Y+H + ++H D+K SN+ + + P
Sbjct: 123 GRGLRYIHS---MSLVHMDIKPSNIFISRTSIP 152
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK-----ISEQ-GLKELKNEVILFS 329
T F K+G G FG V+K +DG A+KR K + EQ L+E+ +L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 66
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFH---IICGT 386
QH ++V+ + + L+ E+ SL I E +I+ + K ++
Sbjct: 67 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQV 122
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
RG+ Y+H + ++H D+K SN+ + + P
Sbjct: 123 GRGLRYIHS---MSLVHMDIKPSNIFISRTSIP 152
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 159
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 160 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 190
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F +G G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E++P D F + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ K++DFG A+
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F +G G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E++P D F + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ K++DFG A+
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+ P + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+++DQ K++DFG A+
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 277 TDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSK-----ISEQ-GLKELKNEVILFS 329
T F K+G G FG V+K +DG A+KR K + EQ L+E+ +L
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 64
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFH---IICGT 386
QH ++V+ + + L+ E+ SL I E +I+ + K ++
Sbjct: 65 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQV 120
Query: 387 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 419
RG+ Y+H + ++H D+K SN+ + + P
Sbjct: 121 GRGLRYIHS---MSLVHMDIKPSNIFISRTSIP 150
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 152
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 153 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 144
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 145 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 175
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 225 IDMRSFPDGGQDFYIRMSASELEKTENNRETDQVQNMDLELPLFELATIANATDNFSINN 284
I++ S DG + + L K N+ D N E + ++ + +++ +
Sbjct: 26 INVESLLDGLNSLVLDLDFPALRK---NKNIDNFLNR-YEKIVKKIRGLQMKAEDYDVVK 81
Query: 285 KLGEGGFGPVYKGTLVDGQEI-AVKRLSKI-----SEQGLKELKNEVILFSKLQHRNLVK 338
+G G FG V Q++ A+K LSK S+ + +++ F+ + V
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA---NSPWVV 138
Query: 339 LLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
L C Q ++ L ++ E++P L + + + + + W+K + TA V+ L
Sbjct: 139 QLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE--KWAKFY-----TAEVVLALDAIH 191
Query: 398 RLRIIHRDLKASNVLLDQDMNPKISDFG 425
+ +IHRD+K N+LLD+ + K++DFG
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFG 219
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 286 LGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCC 343
+G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+V+L
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 344 IQGEEKL------LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 397
EK L+ ++VP + L + R + Y+H
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 141
Query: 398 RLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
I HRD+K N+LLD D K+ DFG A+
Sbjct: 142 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 172
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+ P + S + + + + RF+ A+ V
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 152
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+++DQ K++DFG A+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
+ + I LG G FG V++ ++ + + K+ +K E+ + + +HRN++
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 338 KLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKR-----FHIICGTARGVMY 392
L EE ++I+EF+ LD IF++ + ++R H +C + +
Sbjct: 65 HLHESFESMEELVMIFEFISG--LD--IFERINTSAFELNEREIVSYVHQVC---EALQF 117
Query: 393 LHQDSRLRIIHRDLKASNVLLD--QDMNPKISDFGLAR 428
LH + I H D++ N++ + KI +FG AR
Sbjct: 118 LHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
G+ +LHQ + II+RDLK NVLLD D N +ISD GLA
Sbjct: 301 GLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 271 ATIANATDNFSINN-------KLGEGGFGPVYKGTLV-DGQEIAVKRL-SKISEQGLKEL 321
A I+ NF + +LG G +G V K V GQ +AVKR+ + ++ Q K L
Sbjct: 37 ACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL 96
Query: 322 KNEV-ILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF---IFDQERCKILDWS 377
++ I + V G + + + E + + SLD F + D+ + D
Sbjct: 97 LMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDIL 155
Query: 378 KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ I + + +LH S+L +IHRD+K SNVL++ K+ DFG++
Sbjct: 156 GK--IAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
G+ +LHQ + II+RDLK NVLLD D N +ISD GLA
Sbjct: 301 GLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
G+ +LHQ + II+RDLK NVLLD D N +ISD GLA
Sbjct: 301 GLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
L KL ++ E+ P + S + + + + RF+ A+ V+
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFY----AAQIVLTF 155
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+++DQ K++DFG A+
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
G+ +LHQ + II+RDLK NVLLD D N +ISD GLA
Sbjct: 301 GLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 271 ATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKIS----EQGLKELKNEVI 326
A+ + +F + +G G + V L I R+ K ++ + ++ E
Sbjct: 45 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 327 LFSKLQHRNLVKLLGCCIQGEEKLL-IYEFVPNKSLDSFIFDQERCKILDWSKRFHIICG 385
+F + + + L C Q E +L + E+V L +F +R + L
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE 161
Query: 386 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + YLH+ II+RDLK NVLLD + + K++D+G+ +
Sbjct: 162 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 201
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+ P + S + + + + RF+ A+ V
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 152
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ K++DFG A+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 190
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 277 TDNFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRL-SKISEQGLKELKNEV-ILFSKLQH 333
D+ +LG G +G V K V GQ +AVKR+ + ++ Q K L ++ I +
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 65
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF---IFDQERCKILDWSKRFHIICGTARGV 390
V G + + + E + + SLD F + D+ + D + I + +
Sbjct: 66 PFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKAL 122
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+LH S+L +IHRD+K SNVL++ K+ DFG++
Sbjct: 123 EHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+ P + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+++DQ +++DFG A+
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK 189
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 24/155 (15%)
Query: 286 LGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGCCI 344
+G G FG V++ LV+ E+A+K++ + K KN E+ + ++H N+V L
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 345 QGEEKL------LIYEFVPN----KSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 394
+K L+ E+VP S Q +L + ++ R + Y+H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL----RSLAYIH 158
Query: 395 QDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
+ I HRD+K N+LLD K+ DFG A+
Sbjct: 159 S---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
L KL ++ E+ P + S + + + + RF+ A+ V+
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 155
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+++DQ K++DFG A+
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
L KL ++ E+ P + S + + + + RF+ A+ V+
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 155
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+++DQ K++DFG A+
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Query: 265 LPLFELATIANATDNFSIN-------NKLGEGGFGPVYKGTLV-DGQEIAVKRL-SKISE 315
+P E A +NF + +LG G +G V K V GQ AVKR+ + ++
Sbjct: 14 IPTTENLYFQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNS 73
Query: 316 QGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSF---IFDQERCK 372
Q K L ++ + + + E + I + + SLD F + D+ +
Sbjct: 74 QEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTI 133
Query: 373 ILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
D + I + + +LH S+L +IHRD+K SNVL++ K DFG++
Sbjct: 134 PEDILGK--IAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEI-AVKRLSK---ISEQGLKELKNEVILFSKLQHR 334
+F+ LG+G FG V +E+ A+K L K I + ++ E + + L
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 335 NLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
+ L C Q ++L + E+V L I Q+ K + F+ + G+ +L
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYA-AEISIGLFFL 136
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+ II+RDLK NV+LD + + KI+DFG+ +
Sbjct: 137 HKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVDGQE---IAVKRLSKISEQGLKELKNEVILFS 329
I + +D + + +G G FG + D Q +AVK + + E+ + +K E+I
Sbjct: 14 IMHDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHR 70
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
L+H N+V+ + ++ E+ L I + R + RF G
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS--EDEARF-FFQQLISG 127
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARA 429
V Y H +++ HRDLK N LLD P KI FG +++
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS 166
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 273 IANATDNFSINNKLGEGGFGPVYKGTLVDGQE---IAVKRLSKISEQGLKELKNEVILFS 329
I + +D + + +G G FG + D Q +AVK + + E+ + +K E+I
Sbjct: 14 IMHDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHR 70
Query: 330 KLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
L+H N+V+ + ++ E+ L I + R + RF G
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS--EDEARF-FFQQLISG 127
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARA 429
V Y H +++ HRDLK N LLD P KI FG +++
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS 166
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 279 NFSINNKLGEGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG GGFG VY G V D +A+K + K EL N EV+L K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 332 QH--RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+++LL + + +LI E + D F F ER + + R
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERM-EPVQDLFDFITERGALQEELAR-SFFWQVLEA 126
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFG 425
V + H ++HRD+K N+L+D + K+ DFG
Sbjct: 127 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 333
D F LG G FG V ++ G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 334 RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
LVKL ++ E+V + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 336
D++ + KLG G + V++ + + +++ VK L + + ++K E+ + L+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKN---KIKREIKILENLRGGPN 93
Query: 337 VKLLGCCIQ---GEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
+ L ++ L++E V N F Q + D+ RF++ + + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD-----FKQLYQTLTDYDIRFYM-YEILKALDYC 147
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAF 430
H + I+HRD+K NV++D + ++ D+GLA +
Sbjct: 148 HS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 182
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 279 NFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKN------EVILFSKL 331
+ + LG+GGFG V+ G L D ++A+K + + G L + EV L K+
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 332 Q----HRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
H +++LL E +L+ E P + D F + E+ + + R C
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYITEKGPLGEGPSR----CFFG 146
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMN-PKISDFG 425
+ V + ++HRD+K N+L+D K+ DFG
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFY----AAQIV 172
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 14/170 (8%)
Query: 269 ELATIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLK---ELKNE 324
+ T ++ +D + + LG GG V+ L +++AVK L + + E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 325 VILFSKLQHRNLVKLLGC----CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
+ L H +V + G ++ E+V +L + + + +
Sbjct: 63 AQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAI 119
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+I + + + HQ+ IIHRD+K +N+++ K+ DFG+ARA
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFAEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 36 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFY----AAQIV 146
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 147 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 271 ATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKIS----EQGLKELKNEVI 326
A+ + +F + +G G + V L I ++ K ++ + ++ E
Sbjct: 13 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 72
Query: 327 LFSKLQHRNLVKLLGCCIQGEEKLL-IYEFVPNKSLDSFIFDQERCKILDWSKRFHIICG 385
+F + + + L C Q E +L + E+V L +F +R + L
Sbjct: 73 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE 129
Query: 386 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + YLH+ II+RDLK NVLLD + + K++D+G+ +
Sbjct: 130 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKIS----EQGLKELKNEVILFSKLQHR 334
+F + +G G + V L I ++ K ++ + ++ E +F + +
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 335 NLVKLLGCCIQGEEKLL-IYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
+ L C Q E +L + E+V L +F +R + L + + YL
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYL 126
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+ II+RDLK NVLLD + + K++D+G+ +
Sbjct: 127 HERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 279 NFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKIS----EQGLKELKNEVILFSKLQHR 334
+F + +G G + V L I ++ K ++ + ++ E +F + +
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 335 NLVKLLGCCIQGEEKLL-IYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
+ L C Q E +L + E+V L +F +R + L + + YL
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYL 122
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
H+ II+RDLK NVLLD + + K++D+G+ +
Sbjct: 123 HERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 19/148 (12%)
Query: 285 KLGEGGFGPVYKGTLVDGQ---EIAVKRLSKISEQGLKELKNEVILF-SKLQHRNLVKLL 340
+LG G FG V++ + D Q + AVK++ L+ + E ++ + L +V L
Sbjct: 100 RLGRGSFGEVHR--MEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLY 151
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G +G + E + SL + +Q L + + + G+ YLH R
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQ---GCLPEDRALYYLGQALEGLEYLHSR---R 205
Query: 401 IIHRDLKASNVLLDQD-MNPKISDFGLA 427
I+H D+KA NVLL D + + DFG A
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHA 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 42 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 152
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 19/148 (12%)
Query: 285 KLGEGGFGPVYKGTLVDGQ---EIAVKRLSKISEQGLKELKNEVILF-SKLQHRNLVKLL 340
+LG G FG V++ + D Q + AVK++ L+ + E ++ + L +V L
Sbjct: 81 RLGRGSFGEVHR--MEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLY 132
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G +G + E + SL + +Q L + + + G+ YLH SR R
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQ---GCLPEDRALYYLGQALEGLEYLH--SR-R 186
Query: 401 IIHRDLKASNVLLDQD-MNPKISDFGLA 427
I+H D+KA NVLL D + + DFG A
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHA 214
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 172
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 273 IANATDNFSINNKLGEGGFGPV-YKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKL 331
I + +D + +G G FG + + +AVK + + + + ++ E+I L
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID-ENVQREIINHRSL 73
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+H N+V+ + +I E+ L I + R + RF GV
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFS--EDEARF-FFQQLLSGVS 130
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARA 429
Y H ++I HRDLK N LLD P KI DFG +++
Sbjct: 131 YCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVD-GQEIAVKRLSK---ISEQGL--KELKNEVILFSKL 331
D + + +G+G F V + + GQ+ AVK + S GL ++LK E + L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCK-ILDWSKRFHIICGTARGV 390
+H ++V+LL +++EF+ L I + + + H + +
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNP---KISDFGLA 427
Y H ++ IIHRD+K NVLL N K+ DFG+A
Sbjct: 144 RYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 286 LGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ-HRNLVKLLGCC 343
LGEG V L+ QE AVK + K + EV + + Q HRN+++L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + L++E + S+ S I + L+ S ++ A + +LH I H
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG---IAH 134
Query: 404 RDLKASNVLLDQ--DMNP-KISDFGLA 427
RDLK N+L + ++P KI DFGL
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLG 161
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 278 DNFSI--NNKLGEGGFGPVYKG-TLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQ 332
+NF I + +LG G F V + + GQE A K L K + E+ +E+ + +
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK 86
Query: 333 H-RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
++ L E +LI E+ + S E +++ + +I GV
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLP-ELAEMVSENDVIRLIKQILEGVY 145
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNP----KISDFGLAR 428
YLHQ++ I+H DLK N+LL + P KI DFG++R
Sbjct: 146 YLHQNN---IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSR 182
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 14/170 (8%)
Query: 269 ELATIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLK---ELKNE 324
+ T ++ +D + + LG GG V+ L +++AVK L + + E
Sbjct: 20 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 79
Query: 325 VILFSKLQHRNLVKLLGC----CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
+ L H +V + G ++ E+V +L + + + +
Sbjct: 80 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAI 136
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+I + + + HQ+ IIHRD+K +N+++ K+ DFG+ARA
Sbjct: 137 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI 183
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 14/170 (8%)
Query: 269 ELATIANATDNFSINNKLGEGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLK---ELKNE 324
+ T ++ +D + + LG GG V+ L +++AVK L + + E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 325 VILFSKLQHRNLVKLLGC----CIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
+ L H +V + G ++ E+V +L + + + +
Sbjct: 63 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAI 119
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
+I + + + HQ+ IIHRD+K +N+++ K+ DFG+ARA
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 355 FVPNKSLDSFIFDQERCKIL--DWSKRFHIIC---GTARGVMYLHQDSRLRIIHRDLKAS 409
FV KSL S + ++E + L D+ H+IC A+G+ +L + + IHRDL A
Sbjct: 174 FVEEKSL-SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 229
Query: 410 NVLLDQDMNPKISDFGLAR 428
N+LL + KI DFGLAR
Sbjct: 230 NILLSEKNVVKICDFGLAR 248
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI 365
H N+V LLG C + G ++I EF +L +++
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+++DQ +++DFG A+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK 189
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 29/181 (16%)
Query: 270 LATIAN---ATDNFSINNK-LGEGGFGPVYKGTLVDGQEIAVKR-LSKISEQGLKELKNE 324
+A I N + N ++ K LG G G V G+ +AVKR L + L E+K
Sbjct: 3 IANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK-- 60
Query: 325 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI----FDQERCKILDWSKRF 380
+L H N+++ C + L I + N +L + E K+
Sbjct: 61 -LLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI 118
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD-------------QDMNPKISDFGLA 427
++ A GV +LH L+IIHRDLK N+L+ +++ ISDFGL
Sbjct: 119 SLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 428 R 428
+
Sbjct: 176 K 176
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 355 FVPNKSLDSFIFDQERCKIL--DWSKRFHIIC---GTARGVMYLHQDSRLRIIHRDLKAS 409
FV KSL S + ++E + L D+ H+IC A+G+ +L + + IHRDL A
Sbjct: 172 FVEEKSL-SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 227
Query: 410 NVLLDQDMNPKISDFGLAR 428
N+LL + KI DFGLAR
Sbjct: 228 NILLSEKNVVKICDFGLAR 246
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI 365
H N+V LLG C + G ++I EF +L +++
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 386 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
ARG+ +L S + IHRDL A N+LL ++ KI DFGLAR
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLAR 247
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 276 ATDNFSINNKLGEGGFGPVYKGTLVDGQE------IAVKRLSK-ISEQGLKELKNEVILF 328
A + + LG G FG V + + ++ +AVK L + + K L E+ +
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKIL 84
Query: 329 SKL-QHRNLVKLLGCCI-QGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHI 382
+ + H N+V LLG C QG ++I E+ +L +++ + L+ H+
Sbjct: 85 THIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHM 140
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 19/148 (12%)
Query: 285 KLGEGGFGPVYKGTLVDGQ---EIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKLL 340
+LG G FG V++ + D Q + AVK++ L+ + E++ + L +V L
Sbjct: 79 RLGRGSFGEVHR--MKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLY 130
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G +G + E + SL I Q C L + + + G+ YLH R
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLI-KQMGC--LPEDRALYYLGQALEGLEYLHTR---R 184
Query: 401 IIHRDLKASNVLLDQDMN-PKISDFGLA 427
I+H D+KA NVLL D + + DFG A
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHA 212
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 355 FVPNKSLDSFIFDQERCKIL--DWSKRFHIIC---GTARGVMYLHQDSRLRIIHRDLKAS 409
FV KSL S + ++E + L D+ H+IC A+G+ +L + + IHRDL A
Sbjct: 167 FVEEKSL-SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 222
Query: 410 NVLLDQDMNPKISDFGLAR 428
N+LL + KI DFGLAR
Sbjct: 223 NILLSEKNVVKICDFGLAR 241
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI 365
H N+V LLG C + G ++I EF +L +++
Sbjct: 82 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 355 FVPNKSLDSFIFDQERCKIL--DWSKRFHIIC---GTARGVMYLHQDSRLRIIHRDLKAS 409
FV KSL S + ++E + L D+ H+IC A+G+ +L + + IHRDL A
Sbjct: 165 FVEEKSL-SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 220
Query: 410 NVLLDQDMNPKISDFGLAR 428
N+LL + KI DFGLAR
Sbjct: 221 NILLSEKNVVKICDFGLAR 239
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 278 DNFSINNKLGEGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 329
D + LG G FG V + + +AVK L + + + L +E+ IL
Sbjct: 20 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 79
Query: 330 KLQHRNLVKLLGCCIQ-GEEKLLIYEFVPNKSLDSFI 365
H N+V LLG C + G ++I EF +L +++
Sbjct: 80 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 272 TIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKL 331
+ ++ F I +K+GEG F VY T ++ V KI+ + L + + + ++L
Sbjct: 15 AVPQLSNVFKIEDKIGEGTFSSVYLAT----AQLQVGPEEKIALKHLIPTSHPIRIAAEL 70
Query: 332 Q-------HRNLVKLLGCCIQGEEKLLIYEFVPNKS----LDSFIFDQERCKILDWSKRF 380
Q N++ + C + + ++ ++ ++S L+S F + R +L+ K
Sbjct: 71 QCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFK-- 128
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 428
+ +HQ I+HRD+K SN L ++ + + DFGLA+
Sbjct: 129 --------ALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 29/183 (15%)
Query: 270 LATIAN---ATDNFSINNK-LGEGGFGPVYKGTLVDGQEIAVKR-LSKISEQGLKELKNE 324
+A I N + N ++ K LG G G V G+ +AVKR L + L E+K
Sbjct: 3 IANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK-- 60
Query: 325 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI----FDQERCKILDWSKRF 380
+L H N+++ C + L I + N +L + E K+
Sbjct: 61 -LLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI 118
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD-------------QDMNPKISDFGLA 427
++ A GV +LH L+IIHRDLK N+L+ +++ ISDFGL
Sbjct: 119 SLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 428 RAF 430
+
Sbjct: 176 KKL 178
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 321 LKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
++ E+ + KL H ++K+ E+ ++ E + L + +R K F
Sbjct: 187 VETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 245
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLAR 428
+ + V YLH++ IIHRDLK NVLL ++D KI+DFG ++
Sbjct: 246 YQML---LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 29/183 (15%)
Query: 270 LATIAN---ATDNFSINNK-LGEGGFGPVYKGTLVDGQEIAVKR-LSKISEQGLKELKNE 324
+A I N + N ++ K LG G G V G+ +AVKR L + L E+K
Sbjct: 21 IANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK-- 78
Query: 325 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI----FDQERCKILDWSKRF 380
+L H N+++ C + L I + N +L + E K+
Sbjct: 79 -LLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI 136
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD-------------QDMNPKISDFGLA 427
++ A GV +LH L+IIHRDLK N+L+ +++ ISDFGL
Sbjct: 137 SLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 428 RAF 430
+
Sbjct: 194 KKL 196
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 330
D F LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 28 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 331 LQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 390
+ LVKL ++ E+V + S + + + + RF+ A+ V
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 138
Query: 391 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ L +I+RDLK N+L+D+ +++DFG A+
Sbjct: 139 LTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 29/183 (15%)
Query: 270 LATIAN---ATDNFSINNK-LGEGGFGPVYKGTLVDGQEIAVKR-LSKISEQGLKELKNE 324
+A I N + N ++ K LG G G V G+ +AVKR L + L E+K
Sbjct: 21 IANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK-- 78
Query: 325 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFI----FDQERCKILDWSKRF 380
+L H N+++ C + L I + N +L + E K+
Sbjct: 79 -LLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI 136
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLD-------------QDMNPKISDFGLA 427
++ A GV +LH L+IIHRDLK N+L+ +++ ISDFGL
Sbjct: 137 SLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 428 RAF 430
+
Sbjct: 194 KKL 196
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 321 LKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRF 380
++ E+ + KL H ++K+ E+ ++ E + L + +R K F
Sbjct: 201 VETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 259
Query: 381 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLAR 428
+ + V YLH++ IIHRDLK NVLL ++D KI+DFG ++
Sbjct: 260 YQML---LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK--ISEQGLKE------LKNEVILF 328
D + ++ LG G G V +++A+K +SK + +E ++ E+ +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTAR 388
KL H ++K+ E+ ++ E + L + +R K F+ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---L 125
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLAR 428
V YLH++ IIHRDLK NVLL ++D KI+DFG ++
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK--ISEQGLKE------LKNEVILF 328
D + ++ LG G G V +++A+K +SK + +E ++ E+ +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTAR 388
KL H ++K+ E+ ++ E + L + +R K F+ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---L 125
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLAR 428
V YLH++ IIHRDLK NVLL ++D KI+DFG ++
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK--ISEQGLKE------LKNEVILF 328
D + ++ LG G G V +++A+K +SK + +E ++ E+ +
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTAR 388
KL H ++K+ E+ ++ E + L + +R K F+ +
Sbjct: 76 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---L 131
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLAR 428
V YLH++ IIHRDLK NVLL ++D KI+DFG ++
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 171
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK--ISEQGLKE------LKNEVILF 328
D + ++ LG G G V +++A+K +SK + +E ++ E+ +
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTAR 388
KL H ++K+ E+ ++ E + L + +R K F+ +
Sbjct: 69 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---L 124
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLAR 428
V YLH++ IIHRDLK NVLL ++D KI+DFG ++
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 164
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 380 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 430
HI A V +LH ++HRDLK SN+ D K+ DFGL A
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 278 DNFSINNKLGEGGFGPVYKG-TLVDGQEIAVKRLSK--ISEQGLKE------LKNEVILF 328
D + ++ LG G G V +++A+K +SK + +E ++ E+ +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 329 SKLQHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTAR 388
KL H ++K+ E+ ++ E + L + +R K F+ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---L 125
Query: 389 GVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLAR 428
V YLH++ IIHRDLK NVLL ++D KI+DFG ++
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 30/173 (17%)
Query: 271 ATIANATDN-FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFS 329
+A T N F LG+G FG V I VK + +K LK EVI+
Sbjct: 1 GAMARVTMNEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAK 50
Query: 330 -KLQH------------RNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILD 375
++ H + L Q ++L + E+ L F R ++
Sbjct: 51 DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS 107
Query: 376 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ + YLH S +++RDLK N++LD+D + KI+DFGL +
Sbjct: 108 EDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 19/148 (12%)
Query: 285 KLGEGGFGPVYKGTLVDGQ---EIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKLL 340
++G G FG V++ + D Q + AVK++ L+ + E++ + L +V L
Sbjct: 65 RVGRGSFGEVHR--MKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLY 116
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G +G + E + SL I Q C L + + + G+ YLH R
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLI-KQMGC--LPEDRALYYLGQALEGLEYLHTR---R 170
Query: 401 IIHRDLKASNVLLDQDMN-PKISDFGLA 427
I+H D+KA NVLL D + + DFG A
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHA 198
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 286 LGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ-HRNLVKLLGCC 343
LGEG + V +L +G+E AVK + K + + EV + Q ++N+++L+
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
L++E + S+ + I Q+ + S+ ++ A + +LH I H
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR---VVRDVAAALDFLHTKG---IAH 134
Query: 404 RDLKASNVLLD--QDMNP-KISDFGLA 427
RDLK N+L + + ++P KI DF L
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLG 161
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 278 DNFSINNKLGEGGFGPVYK------GTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKL 331
D+F ++LG G G V K G ++ + I ++ I Q ++EL+ + +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQ----VLHEC 71
Query: 332 QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 391
+V G E + E + SLD + + +R K + RG+
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK---VSIAVLRGLA 128
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
YL + + +I+HRD+K SN+L++ K+ DFG++
Sbjct: 129 YLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 19/148 (12%)
Query: 285 KLGEGGFGPVYKGTLVDGQ---EIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKLL 340
++G G FG V++ + D Q + AVK++ L+ + E++ + L +V L
Sbjct: 81 RVGRGSFGEVHR--MKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLY 132
Query: 341 GCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 400
G +G + E + SL I Q C L + + + G+ YLH R
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLI-KQMGC--LPEDRALYYLGQALEGLEYLHTR---R 186
Query: 401 IIHRDLKASNVLLDQDMN-PKISDFGLA 427
I+H D+KA NVLL D + + DFG A
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHA 214
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 335
+SI ++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+++L I + ++ E N L+S++ ++ K +D +R V +HQ
Sbjct: 90 IIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
I+H DLK +N L+ M K+ DFG+A
Sbjct: 146 HG---IVHSDLKPANFLIVDGM-LKLIDFGIA 173
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 29/165 (17%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFS-KLQH--- 333
+ F LG+G FG V I VK + +K LK EVI+ ++ H
Sbjct: 10 NEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 59
Query: 334 ---------RNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHII 383
+ L Q ++L + E+ L F R ++ +
Sbjct: 60 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYG 116
Query: 384 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ YLH S +++RDLK N++LD+D + KI+DFGL +
Sbjct: 117 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 29/165 (17%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFS-KLQH--- 333
+ F LG+G FG V I VK + +K LK EVI+ ++ H
Sbjct: 8 NEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 57
Query: 334 ---------RNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHII 383
+ L Q ++L + E+ L F R ++ +
Sbjct: 58 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYG 114
Query: 384 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ YLH S +++RDLK N++LD+D + KI+DFGL +
Sbjct: 115 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 335
+SI ++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+++L I + ++ E N L+S++ ++ K +D +R V +HQ
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
I+H DLK +N L+ M K+ DFG+A
Sbjct: 174 HG---IVHSDLKPANFLIVDGM-LKLIDFGIA 201
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 335
+SI ++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+++L I + ++ E N L+S++ ++ K +D +R V +HQ
Sbjct: 90 IIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
I+H DLK +N L+ M K+ DFG+A
Sbjct: 146 HG---IVHSDLKPANFLIVDGM-LKLIDFGIA 173
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 12/179 (6%)
Query: 254 ETDQVQNMDLELPLFELATIANATDN-FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSK 312
E D+ Q LE L + + D+ F ++LG G G V+K + + ++L
Sbjct: 8 ELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH 67
Query: 313 ISEQGLKELKNEVILFSKLQHR----NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQ 368
+ + ++N++I ++ H +V G E + E + SLD +
Sbjct: 68 LEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA 125
Query: 369 ERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
R K + +G+ YL + + +I+HRD+K SN+L++ K+ DFG++
Sbjct: 126 GRIPEQILGK---VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 278 DNFSINNKLGEGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 330
++F LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 331 LQHRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+H L L Q ++L + E+ L F R ++ +
Sbjct: 67 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 122
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ YLH +++RD+K N++LD+D + KI+DFGL +
Sbjct: 123 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFS-KLQH--- 333
+ F LG+G FG V I VK + +K LK EVI+ ++ H
Sbjct: 148 NEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 197
Query: 334 ---------RNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIIC 384
+ L Q ++L N F +ER D ++ +
Sbjct: 198 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 257
Query: 385 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+A + YLH + +++RDLK N++LD+D + KI+DFGL +
Sbjct: 258 VSA--LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Query: 387 ARGVMY-------LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
AR V Y L R RI++RDLK N+LLD + +ISD GLA
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Query: 387 ARGVMY-------LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
AR V Y L R RI++RDLK N+LLD + +ISD GLA
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHR--- 334
D+F ++LG G G V+K + + ++L + + ++N++I ++ H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 63
Query: 335 -NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
+V G E + E + SLD + R K + +G+ YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ + +I+HRD+K SN+L++ K+ DFG++
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 392 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
YLH S +++RDLK N++LD+D + KI+DFGL +
Sbjct: 266 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 278 DNFSINNKLGEGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 330
++F LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 331 LQHRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+H L L Q ++L + E+ L F R ++ +
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ YLH +++RD+K N++LD+D + KI+DFGL +
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 278 DNFSINNKLGEGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 330
++F LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 331 LQHRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+H L L Q ++L + E+ L F R ++ +
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ YLH +++RD+K N++LD+D + KI+DFGL +
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 278 DNFSINNKLGEGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 330
++F LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 331 LQHRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+H L L Q ++L + E+ L F R ++ +
Sbjct: 65 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 120
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ YLH +++RD+K N++LD+D + KI+DFGL +
Sbjct: 121 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHR--- 334
D+F ++LG G G V+K + + ++L + + ++N++I ++ H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 63
Query: 335 -NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
+V G E + E + SLD + R K + +G+ YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ + +I+HRD+K SN+L++ K+ DFG++
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 278 DNFSINNKLGEGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 330
++F LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 331 LQHRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+H L L Q ++L + E+ L F R ++ +
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ YLH +++RD+K N++LD+D + KI+DFGL +
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 269 ELATIANATDNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILF 328
E + + +F + LG G G + + D +++AVKR I + EV L
Sbjct: 15 ETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKR---ILPECFSFADREVQLL 71
Query: 329 SKL-QHRNLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWS----KRFHII 383
+ +H N+++ C + + + ++++ + + + QE + D++ + ++
Sbjct: 72 RESDEHPNVIRYF--CTEKDRQ---FQYIAIELCAATL--QEYVEQKDFAHLGLEPITLL 124
Query: 384 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-----DMNPKISDFGLAR 428
T G+ +LH L I+HRDLK N+L+ + ISDFGL +
Sbjct: 125 QQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHR--- 334
D+F ++LG G G V+K + + ++L + + ++N++I ++ H
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 125
Query: 335 -NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
+V G E + E + SLD + R K + +G+ YL
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 182
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ + +I+HRD+K SN+L++ K+ DFG++
Sbjct: 183 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
D++ + K+G G + V++G V+ E + K + IL + + N+V
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-KCIIKILKPVKKKKIKREIKILQNLMGGPNIV 89
Query: 338 KLLGCCIQGEEKL--LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
KLL K LI+E+V N F + D+ R++I + + Y H
Sbjct: 90 KLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDYCHS 143
Query: 396 DSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAF 430
I+HRD+K NV++D ++ ++ D+GLA +
Sbjct: 144 QG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 278 DNFSINNKLGEGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 330
++F LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 331 LQHRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+H L L Q ++L + E+ L F R ++ +
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ YLH +++RD+K N++LD+D + KI+DFGL +
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 335
+SI ++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+++L I + ++ E N L+S++ ++ K +D +R V +HQ
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
I+H DLK +N L+ M K+ DFG+A
Sbjct: 174 HG---IVHSDLKPANFLIVDGM-LKLIDFGIA 201
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 278 DNFSINNKLGEGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 330
++F LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 331 LQHRNLVKLLGCCIQGEEKL-LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARG 389
+H L L Q ++L + E+ L F R ++ +
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 390 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 428
+ YLH +++RD+K N++LD+D + KI+DFGL +
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHR--- 334
D+F ++LG G G V+K + + ++L + + ++N++I ++ H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 63
Query: 335 -NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
+V G E + E + SLD + R K + +G+ YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ + +I+HRD+K SN+L++ K+ DFG++
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHR--- 334
D+F ++LG G G V+K + + ++L + + ++N++I ++ H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 63
Query: 335 -NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
+V G E + E + SLD + R K + +G+ YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ + +I+HRD+K SN+L++ K+ DFG++
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHR--- 334
D+F ++LG G G V+K + + ++L + + ++N++I ++ H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 63
Query: 335 -NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
+V G E + E + SLD + R K + +G+ YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ + +I+HRD+K SN+L++ K+ DFG++
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 335
+SI ++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+++L I + ++ E N L+S++ ++ K +D +R V +HQ
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
I+H DLK +N L+ M K+ DFG+A
Sbjct: 174 HG---IVHSDLKPANFLIVDGM-LKLIDFGIA 201
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHR--- 334
D+F ++LG G G V+K + + ++L + + ++N++I ++ H
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 66
Query: 335 -NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
+V G E + E + SLD + R K + +G+ YL
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 123
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ + +I+HRD+K SN+L++ K+ DFG++
Sbjct: 124 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 335
+SI ++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+++L I + ++ E N L+S++ ++ K +D +R V +HQ
Sbjct: 71 IIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 126
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
I+H DLK +N L+ M K+ DFG+A
Sbjct: 127 HG---IVHSDLKPANFLIVDGM-LKLIDFGIA 154
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 335
+SI ++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+++L I + ++ E N L+S++ ++ K +D +R V +HQ
Sbjct: 70 IIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 125
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
I+H DLK +N L+ M K+ DFG+A
Sbjct: 126 HG---IVHSDLKPANFLIVDGM-LKLIDFGIA 153
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 286 LGEGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ-HRNLVKLLGCC 343
LGEG V L+ QE AVK + K + EV + + Q HRN+++L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 344 IQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 403
+ + L++E + S+ S I + L+ S ++ A + +LH I H
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG---IAH 134
Query: 404 RDLKASNVLLDQ--DMNP-KISDFGLA 427
RDLK N+L + ++P KI DF L
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLG 161
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 335
+SI ++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 336 LVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
+++L I + ++ E N L+S++ ++ K +D +R V +HQ
Sbjct: 74 IIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 129
Query: 396 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
I+H DLK +N L+ M K+ DFG+A
Sbjct: 130 HG---IVHSDLKPANFLIVDGM-LKLIDFGIA 157
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHR--- 334
D+F ++LG G G V+K + + ++L + + ++N++I ++ H
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 82
Query: 335 -NLVKLLGCCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 393
+V G E + E + SLD + R K + +G+ YL
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 139
Query: 394 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 427
+ + +I+HRD+K SN+L++ K+ DFG++
Sbjct: 140 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
D++ + K+G G + V++G V+ E + K + IL + N+V
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-KCIIKILKPVKKKKIKREIKILQNLXGGPNIV 89
Query: 338 KLLGCCIQGEEKL--LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
KLL K LI+E+V N F + D+ R++I + + Y H
Sbjct: 90 KLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDYCHS 143
Query: 396 DSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAF 430
I+HRD+K NV++D ++ ++ D+GLA +
Sbjct: 144 QG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRN---- 335
+ + KLG G F V+ + G++ ++ K +E + +E+ L +++ +
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 82
Query: 336 ----LVKLLG----CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
+V+LL + G +++E + + L I + L K+ II
Sbjct: 83 NREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKK--IIQQVL 140
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLL 413
+G+ YLH ++ RIIH D+K N+LL
Sbjct: 141 QGLDYLH--TKCRIIHTDIKPENILL 164
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 278 DNFSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 337
D++ + K+G G + V++G V+ E + K + IL + N+V
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-KCIIKILKPVKKKKIKREIKILQNLXGGPNIV 90
Query: 338 KLLGCCIQGEEKL--LIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 395
KLL K LI+E+V N F + D+ R++I + + Y H
Sbjct: 91 KLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDYCHS 144
Query: 396 DSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAF 430
I+HRD+K NV++D ++ ++ D+GLA +
Sbjct: 145 QG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 177
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 280 FSINNKLGEGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRN---- 335
+ + KLG G F V+ + G++ ++ K +E + +E+ L +++ +
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 98
Query: 336 ----LVKLLG----CCIQGEEKLLIYEFVPNKSLDSFIFDQERCKILDWSKRFHIICGTA 387
+V+LL + G +++E + + L I + L K+ II
Sbjct: 99 NREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKK--IIQQVL 156
Query: 388 RGVMYLHQDSRLRIIHRDLKASNVLL 413
+G+ YLH ++ RIIH D+K N+LL
Sbjct: 157 QGLDYLH--TKCRIIHTDIKPENILL 180
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,060,831
Number of Sequences: 62578
Number of extensions: 633862
Number of successful extensions: 3269
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 210
Number of HSP's that attempted gapping in prelim test: 1515
Number of HSP's gapped (non-prelim): 1121
length of query: 430
length of database: 14,973,337
effective HSP length: 102
effective length of query: 328
effective length of database: 8,590,381
effective search space: 2817644968
effective search space used: 2817644968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)