BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047620
(125 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 97/128 (75%), Gaps = 9/128 (7%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
MGEELSGL+V+ LQNLENQLE+SL+GVR+KKDQ+L +EI+ LNR+GNL+HQENL+LHKKV
Sbjct: 111 MGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKV 170
Query: 61 NLINQENRELKKKVYEGRNVNAANSISQPTYTISNGYDMHPP----LHLQLSQPQPQKNE 116
NL++Q+N EL +KV E V AN S ++NG DM +HLQLSQPQ +E
Sbjct: 171 NLMHQQNMELHEKVSEVEGVKIANKNS----LLTNGLDMRDTSNEHVHLQLSQPQ-HDHE 225
Query: 117 TPAKPMQL 124
T +K +QL
Sbjct: 226 THSKAIQL 233
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
MGE+LSGLNVK+LQ+LENQLE+SL+ VR KKD VL DEI ELNRKG+L+HQEN+EL+KK+
Sbjct: 111 MGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKI 170
Query: 61 NLINQENRELKKKVYEGRNVNAANSISQPTYTISNGYDMHPPLHLQLSQ-PQPQKNETPA 119
+LI QEN EL KK+YE + N S Y + + P+ L LS PQ E
Sbjct: 171 SLIRQENAELYKKIYETEGPSEVNRDSPTPYNFAVIEKTNVPVQLGLSTLPQHSDAEQST 230
Query: 120 KP 121
P
Sbjct: 231 AP 232
>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana
GN=AGL17 PE=2 SV=2
Length = 227
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
Query: 2 GEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKVN 61
G EL+GL+VK+LQN+E+QLEMSL+G+R+K++Q+LT+EIKEL RK NL+H ENLEL +KV
Sbjct: 112 GVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQ 171
Query: 62 LINQENRELKKKVYEGRNVNAANSISQPTYTISNGYDMHPPLHLQLSQPQPQKNETPA 119
I+QEN EL KK Y N N + Y+ H + LQLSQP+ +T +
Sbjct: 172 RIHQENVELYKKAYGTSNTNGLG----HHELVDAVYESHAQVRLQLSQPEQSHYKTSS 225
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana GN=ANR1
PE=1 SV=1
Length = 234
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 85/125 (68%), Gaps = 6/125 (4%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GEELSG+N DLQNLE+QL SLKGVRLKKDQ++T+EI+ELNRKG ++ +EN EL V
Sbjct: 112 VGEELSGMNANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIV 171
Query: 61 NLINQENRELKKKVYEGRNVNAANSISQPTYTISNGYDMHPPLHLQLSQPQPQKNETPAK 120
+++ +EN +L+KKV+ N NS P ISNG + P LQL Q QP E K
Sbjct: 172 DIMRKENIKLQKKVHGRTNAIEGNSSVDP---ISNGTTTYAPPQLQLIQLQPAPRE---K 225
Query: 121 PMQLG 125
++LG
Sbjct: 226 SIRLG 230
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 85/121 (70%), Gaps = 5/121 (4%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
MGE+L+GL+V +L +LENQ+E+SL+G+R++K+Q+LT EI+EL++K NL+HQENL+L +KV
Sbjct: 111 MGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKV 170
Query: 61 NLINQENRELKKKVYEGRNVNAANSISQPTYTISNGYDMHPPLHLQLSQPQPQKNETPAK 120
I+QEN EL KK Y + N + +++ + H + LQLSQP+ +TP +
Sbjct: 171 QRIHQENVELYKKAY----MANTNGFTHREVAVADD-ESHTQIRLQLSQPEHSDYDTPPR 225
Query: 121 P 121
Sbjct: 226 A 226
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 80/120 (66%), Gaps = 2/120 (1%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
MGEELSGL V+DLQ LEN+LE+SL+ +R++KD +L EI+EL+ KG+L+HQEN+EL + +
Sbjct: 110 MGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSL 169
Query: 61 NLINQENREL--KKKVYEGRNVNAANSISQPTYTISNGYDMHPPLHLQLSQPQPQKNETP 118
N+++Q+ EL K + E R AN S Y+ + + P L+LSQ Q ++ E
Sbjct: 170 NVMSQQKLELYNKLQACEQRGATDANESSSTPYSFRIIQNANMPPSLELSQSQQREGECS 229
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 4/116 (3%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GEE+S V+DLQ L+NQ+EMSL +R KKDQ+L +EI +LN KG+L+ +EN EL KK
Sbjct: 111 LGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKF 170
Query: 61 NLINQENRELKKKVYEGRNVNA---ANSISQPTYTISNGYDMHPPLHLQLSQPQPQ 113
N+ +Q N EL KK+ G + ++ S P + S D + L+LSQ + +
Sbjct: 171 NIAHQRNIELHKKLNSGESTSSEQVTRSSKDPGES-STPRDSRVCIDLELSQKEVE 225
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 42/45 (93%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRK 45
+G++LSGL+V+DLQNLE++LEMSLK +RL+KD V+ D+I+EL+RK
Sbjct: 111 LGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
MGE+L L++K+LQ+LE+QL+ ++K +R +K+Q + + I L +K L N L KK+
Sbjct: 113 MGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKI 172
Query: 61 NLINQENRELKKKVYEGRNVNAANSISQ--PTYTISNGYD 98
+ RE K EG+ V +NS S P Y +++ D
Sbjct: 173 -----KEREKKTGQQEGQLVQCSNSSSVLLPQYCVTSSRD 207
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 2 GEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKVN 61
GEEL GL++ +LQ LE LE L V L KDQ ++I EL RK + L +EN++L +V+
Sbjct: 112 GEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVS 171
Query: 62 LIN 64
I+
Sbjct: 172 QIS 174
>sp|Q03489|AGL9_PETHY Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida
GN=FBP2 PE=1 SV=2
Length = 241
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 23/109 (21%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L LN K+L++LE QL+MSLK +R + Q++ D++++L RK + L
Sbjct: 114 LGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHAL----------- 162
Query: 61 NLINQENRELKKKVYEGRNVNA-----ANSIS---QPTYTISNGYDMHP 101
N+ NR LK+++ EG +N A + Q T T +G+ HP
Sbjct: 163 ---NEANRTLKQRLMEGSTLNLQWQQNAQDVGYGRQATQTQGDGF-FHP 207
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8
PE=2 SV=1
Length = 241
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 13/103 (12%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
MGE+L L++K+LQ+LE+QL ++K +R +K+Q + + I L +K +L N L KK+
Sbjct: 113 MGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKI 172
Query: 61 -----NLINQENRELKKKVYEGRNVNAANSISQPTYTISNGYD 98
N ++QE + ++ + +SI QP Y +++ D
Sbjct: 173 KEREKNTVHQEVQLIQ--------CSNNSSILQPQYCLTSSRD 207
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 43/60 (71%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L +++KDLQNLE QLE +LK +R +K+Q++ + + L RK N + +EN L K++
Sbjct: 115 LGEDLEPMSLKDLQNLEQQLETALKHIRSRKNQLMYESLNHLQRKENEIQEENSMLTKQI 174
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L L +K+LQ LE+QLE SLK +R KK+Q+L + I EL +K L +N L K +
Sbjct: 113 LGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLM 172
Query: 61 NLINQENRELKKKVYEGRNVNAANSISQPTYTISNGYDMHPPLHLQLSQPQPQ-KNETPA 119
++N + E +N A S S PT + D P + SQP+ ++E
Sbjct: 173 ETEKEKNNAIINTNREEQN-GATPSTSSPTPVTAP--DPIPTTNNSQSQPRGSGESEAQP 229
Query: 120 KPMQLG 125
P Q G
Sbjct: 230 SPAQAG 235
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L L +K+LQ LE+QLE SLK +R KK+Q+L + I EL +K L +N L K +
Sbjct: 113 LGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLM 172
Query: 61 NLINQENRELKKKVYEGRNVNAANSISQPTYTISNGYDMHPPLHLQLSQPQPQ-KNETPA 119
++N + E +N A S S PT + D P + SQP+ ++E
Sbjct: 173 ETEKEKNNAIINTNREEQN-GATPSTSSPTPVTAP--DPIPTTNNSQSQPRGSGESEAQP 229
Query: 120 KPMQLG 125
P Q G
Sbjct: 230 SPAQAG 235
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1
Length = 254
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L ++ K+LQNLE QL+ +LK +R +K+Q++ D I EL RK + ++N L K++
Sbjct: 113 LGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQI 172
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L ++ K+LQNLE QL+ +LK +R +K+Q++ D I EL RK + ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQI 172
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L ++ K+LQNLE QL+ +LK +R +K+Q++ D I EL RK + ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQI 172
>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
italica GN=2AP1 PE=2 SV=1
Length = 256
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L ++ K+LQNLE QL+ +LK +R +K+Q++ D I EL RK + ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQI 172
>sp|Q69TG5|MAD55_ORYSJ MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica
GN=MADS55 PE=2 SV=2
Length = 245
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 2 GEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
GEEL GL+V++LQ +E LE L+ V KDQ EI EL RKG L +EN+ L ++
Sbjct: 135 GEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQM 193
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GEEL +++KDLQNLE QLE +LK +R +K+Q++ + + L RK + +EN L K++
Sbjct: 115 LGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQI 174
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 10/85 (11%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L LN+K+LQNLE+QL+ +LK +R +K+Q++ + I L ++ L ++N +L KKV
Sbjct: 113 VGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKV 172
Query: 61 ----------NLINQENRELKKKVY 75
N +Q+N E+ +
Sbjct: 173 KEREKEVAQQNQWDQQNHEINSSTF 197
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L ++ K+LQNLE QL+ +LK +R +K+Q++ D + EL RK + ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|Q0J466|MADS7_ORYSJ MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica
GN=MADS7 PE=1 SV=2
Length = 249
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 20/108 (18%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L L +K+L++LE QL+ SLK VR + + L D++ EL RK
Sbjct: 115 LGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKE-------------- 160
Query: 61 NLINQENRELKKKVYEGRNVNAANSISQPTYTISNGYDMHP----PLH 104
++++ NR L++K+ E +V Q I GY+ P PLH
Sbjct: 161 QMVSEANRCLRRKLEESNHVRGQQVWEQGCNLI--GYERQPEVQQPLH 206
>sp|P0C5B0|MADS7_ORYSI MADS-box transcription factor 7 OS=Oryza sativa subsp. indica
GN=MADS7 PE=2 SV=2
Length = 249
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 20/108 (18%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L L +K+L++LE QL+ SLK VR + + L D++ EL RK
Sbjct: 115 LGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKE-------------- 160
Query: 61 NLINQENRELKKKVYEGRNVNAANSISQPTYTISNGYDMHP----PLH 104
++++ NR L++K+ E +V Q I GY+ P PLH
Sbjct: 161 QMVSEANRCLRRKLEESNHVRGQQVWEQGCNLI--GYERQPEVQQPLH 206
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L ++ K+LQNLE QL+ +LK +R +K+Q++ D + EL RK + ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L ++ K+LQNLE QL+ +LK +R +K+Q++ D + EL RK + ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L ++ K+LQNLE QL+ +LK +R +K+Q++ D + EL RK + ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum
GN=TDR4 PE=2 SV=1
Length = 227
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 44/60 (73%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L L++K+LQNLE+QL+ +LK +R +K+Q++ + I L +K L ++N +L KKV
Sbjct: 113 VGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKV 172
>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii
GN=SCM1 PE=2 SV=1
Length = 250
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L LN+K+LQNLE+QL +LK +R +K+Q++ + I L ++ L ++N +L KKV
Sbjct: 113 VGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKV 172
Query: 61 ----------NLINQENRELKKKVY 75
N +Q+N E+ +
Sbjct: 173 KEREKEVEQQNQWDQQNHEINSSTF 197
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 43/60 (71%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L+ ++ K+LQNLE QL+ +LK +R +K+Q++ + I EL RK + ++N L K++
Sbjct: 113 LGEDLNAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQRKEKAIQEQNSMLSKQI 172
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L L++K+L+ LENQ+E+SLK +R +K+Q L D++ +L K L N +L KK+
Sbjct: 110 LGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKL 169
Query: 61 NLINQEN 67
+ EN
Sbjct: 170 QETSAEN 176
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L L++K+L+ LENQ+E+SLK +R +K+Q L D++ +L K L N +L KK+
Sbjct: 110 LGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKL 169
Query: 61 NLINQEN 67
+ EN
Sbjct: 170 QETSAEN 176
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L L++K+L+ LENQ+E+SL +R K+Q L D++ EL RK L N +L +K+
Sbjct: 114 LGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKI 173
Query: 61 NLINQEN 67
+ EN
Sbjct: 174 QETSGEN 180
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L L++K+L+ LENQ+E+SL +R K+Q L D++ EL RK L N +L +K+
Sbjct: 114 LGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKI 173
Query: 61 NLINQEN 67
+ EN
Sbjct: 174 QETSGEN 180
>sp|Q42464|AGL9_SOLLC Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum
GN=TDR5 PE=2 SV=1
Length = 224
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 14/85 (16%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L LN K+L++LE QL+MSLK +R + Q++ D++ + RK + L
Sbjct: 114 LGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHAL----------- 162
Query: 61 NLINQENRELKKKVYEGRNVNAANS 85
N+ NR LK+++ EG +N S
Sbjct: 163 ---NEANRTLKQRLMEGSQLNLQCS 184
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1 PE=2
SV=1
Length = 256
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L ++ K+LQNLE QL+ +LK +R +K+Q++ + I EL RK + ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYESINELQRKEKAIQEQNSMLSKQI 172
>sp|O65874|MTF1_PEA MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1
Length = 247
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
MGE+L L+ KDL+ LE QL+ SLK +R + Q + D++ +L RK +LL + N L +++
Sbjct: 116 MGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRM 175
>sp|A2IB53|AP1_CITSI Floral homeotic protein APETALA 1 OS=Citrus sinensis GN=AP1 PE=2
SV=1
Length = 256
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L ++ K+LQNLE QL+ +LK +R +K+Q++ + I EL +K + ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLFKQI 172
>sp|Q6Q9H6|MAD34_ORYSJ MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica
GN=MADS34 PE=2 SV=2
Length = 239
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L+ L +L+ LE+Q+ +LK +R +K QVL DE+ +L RK +L N L +K+
Sbjct: 113 LGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKL 172
Query: 61 NLINQE 66
+ I+ E
Sbjct: 173 DEIDVE 178
>sp|Q38694|AGL9_ARADE Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2
SV=1
Length = 250
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L L K+L+ LE QL+ SL+ +R + Q + D++ +L R+ +L + N L ++
Sbjct: 112 LGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRF 171
Query: 61 NLINQENRELKKKVYEGRNVNAANSISQPT 90
+Q N +++V++ N +A QP
Sbjct: 172 EESSQAN---QQQVWDPSNTHAVGYGRQPA 198
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var. italica
GN=CAL PE=2 SV=1
Length = 251
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L +++K+LQNLE QL+ SLK +R +K+Q++ + + L RK + +EN L K++
Sbjct: 115 LGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLAKQI 174
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp. pekinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L +++K+LQNLE QL+ SLK +R +K+Q++ + + L RK + +EN L K++
Sbjct: 115 LGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQI 174
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L +++K+LQNLE QL+ SLK +R +K+Q++ + + L RK + +EN L K++
Sbjct: 115 LGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQI 174
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2 SV=1
Length = 254
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L +++K+LQNLE QL+ SLK +R +K+Q++ + + L RK + +EN L K++
Sbjct: 115 LGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQI 174
>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
PE=1 SV=2
Length = 256
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 42/60 (70%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L ++ K+LQNLE QL+ +LK +R +K+Q++ + I EL +K + ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQI 172
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L L+VK+LQ LE QLE +L R +K Q++ ++++EL RK L + N +L K+
Sbjct: 111 LGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170
Query: 61 NL 62
+
Sbjct: 171 EV 172
>sp|Q9SAR1|MADS8_ORYSJ MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica
GN=MADS8 PE=1 SV=1
Length = 248
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE+L L +K+L+ LE QL+ SL+ +R + Q + D++ +L R+ +L + N L +K+
Sbjct: 115 LGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKL 174
Query: 61 NLINQENRELKKKVYE 76
+E+ +L +V+E
Sbjct: 175 ----EESNQLHGQVWE 186
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1 SV=1
Length = 242
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRKGNLLHQENLELHKKV 60
+GE L+ LN++DL+NLE ++E + +R KK+++L EI+ + ++ LH N L K+
Sbjct: 128 LGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKI 187
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 1 MGEELSGLNVKDLQNLENQLEMSLKGVRLKKDQVLTDEIKELNRK 45
+GE+L G+++K+LQ LE QLE +L R +K QV+ ++++EL RK
Sbjct: 110 VGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRK 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.129 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,763,217
Number of Sequences: 539616
Number of extensions: 1809793
Number of successful extensions: 8159
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 193
Number of HSP's that attempted gapping in prelim test: 7784
Number of HSP's gapped (non-prelim): 536
length of query: 125
length of database: 191,569,459
effective HSP length: 92
effective length of query: 33
effective length of database: 141,924,787
effective search space: 4683517971
effective search space used: 4683517971
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)