BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047623
(340 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MBA2|MIND1_ARATH Putative septum site-determining protein minD homolog,
chloroplastic OS=Arabidopsis thaliana GN=MIND1 PE=1 SV=1
Length = 326
Score = 521 bits (1343), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/290 (92%), Positives = 284/290 (97%)
Query: 28 SSKSSIQSVLQWNRKPELAGETPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDA 87
S +S I+SVLQ+NRKPELAGETPR+VVITSGKGGVGKTTTTANVGLSLAR GFSVVAIDA
Sbjct: 36 SRRSPIRSVLQFNRKPELAGETPRIVVITSGKGGVGKTTTTANVGLSLARYGFSVVAIDA 95
Query: 88 DVGLRNLDLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGF 147
D+GLRNLDLLLGLENRVNYT VEV+NGDCRLDQALVRDKRWSNFELLCISKPRSKLP+GF
Sbjct: 96 DLGLRNLDLLLGLENRVNYTCVEVINGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGF 155
Query: 148 GGKALTWVVEALKSRQEGSPDFILIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDAD 207
GGKAL W+V+ALK+R EGSPDFI+IDCPAGIDAGFITAITPANEAVLVTTPDIT+LRDAD
Sbjct: 156 GGKALEWLVDALKTRPEGSPDFIIIDCPAGIDAGFITAITPANEAVLVTTPDITALRDAD 215
Query: 208 RVTGLLECDGIRDIKMVVNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTN 267
RVTGLLECDGIRDIKM+VNRVRTDMIKGEDMMSVLD+QEMLGL+LLGVIPEDSEVIRSTN
Sbjct: 216 RVTGLLECDGIRDIKMIVNRVRTDMIKGEDMMSVLDVQEMLGLSLLGVIPEDSEVIRSTN 275
Query: 268 RGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMKAVMVEEEPKRRGFFSFFG 317
RG+PLVLNKPPTLAGLAFEQAAWRLVEQDSMKAVMVEEEPK+RGFFSFFG
Sbjct: 276 RGFPLVLNKPPTLAGLAFEQAAWRLVEQDSMKAVMVEEEPKKRGFFSFFG 325
>sp|Q20EV4|MIND_OLTVI Putative septum site-determining protein MinD OS=Oltmannsiellopsis
viridis GN=minD PE=3 SV=1
Length = 316
Score = 303 bits (776), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/309 (55%), Positives = 221/309 (71%), Gaps = 12/309 (3%)
Query: 15 LFPSKTI--KPLKPFSSKSSIQSVLQWNRKPELA--GETPRVVVITSGKGGVGKTTTTAN 70
+F S T P +P S S + N +P+L TPR +V+TSGKGGVGKTT TAN
Sbjct: 15 IFSSNTNFETPFQPRVFHPSTSS--EINERPDLNLLEGTPRTIVVTSGKGGVGKTTATAN 72
Query: 71 VGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSN 130
+G+S+ARLG+ VV +DAD+GLRNLDLLLGLENRV YT +++L+G CRLDQAL+RDKRW N
Sbjct: 73 LGMSIARLGYRVVLVDADIGLRNLDLLLGLENRVLYTAMDILDGQCRLDQALIRDKRWKN 132
Query: 131 FELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFILIDCPAGIDAGFITAITPAN 190
LL ISK R + + K + ++E+L Q+ D+ILIDCPAGID GFI A++PA
Sbjct: 133 LSLLAISKNRQRYNVT--RKRMNMLIESL---QKQGYDYILIDCPAGIDVGFINAVSPAK 187
Query: 191 EAVLVTTPDITSLRDADRVTGLLECDGIRDIKMVVNRVRTDMIKGEDMMSVLDIQEMLGL 250
EA++VTTP+ITS+RDADRV GLLE +GI ++K++VNRVR++MI+ DMMSV D+QEMLG+
Sbjct: 188 EAIIVTTPEITSIRDADRVAGLLESNGIYNVKLLVNRVRSEMIQQNDMMSVRDVQEMLGI 247
Query: 251 ALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV-EQDSMKAVMVEEEPKR 309
LLG IPED+ VI STNRG PLVL K TL+G+AFE AA RL+ +QD +
Sbjct: 248 PLLGAIPEDNHVIISTNRGEPLVLKKKLTLSGIAFENAARRLIGKQDYFIDLQTPYRNVF 307
Query: 310 RGFFSFFGL 318
+ F F G
Sbjct: 308 QRFQQFLGF 316
>sp|Q9MUM5|MIND_MESVI Putative septum site-determining protein MinD OS=Mesostigma viride
GN=minD PE=3 SV=1
Length = 286
Score = 297 bits (760), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/277 (60%), Positives = 206/277 (74%), Gaps = 9/277 (3%)
Query: 38 QWNRKPELAGET-PRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDL 96
Q N+ E T R +VITSGKGGVGKTTTTAN+G+S+ARLG+ V IDADVGLRNLDL
Sbjct: 4 QINKDGEKKNSTDTRTIVITSGKGGVGKTTTTANLGMSIARLGYKVALIDADVGLRNLDL 63
Query: 97 LLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVV 156
LLGLENRV YT +EV G+C LDQAL+RDKRWSN LL ISK R + L + + +V
Sbjct: 64 LLGLENRVIYTAMEVFEGECCLDQALIRDKRWSNLALLAISKTRQRYHLTR--RNMEMLV 121
Query: 157 EALKSRQEGSPDFILIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECD 216
++++ R + +FILIDCPAGID GF+ A+ PA EAV+VTTP+ITS+RDADRV GLLE
Sbjct: 122 DSIRLR---NYNFILIDCPAGIDVGFVNAVAPAEEAVVVTTPEITSIRDADRVAGLLEAS 178
Query: 217 GIRDIKMVVNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNK 276
GI ++K++VNRVR DMI+ DM+SV D+QEMLG+ LLG IPED+ VI STNRG PLVLNK
Sbjct: 179 GIYEVKLLVNRVRPDMIQKNDMLSVRDVQEMLGIPLLGAIPEDTNVIVSTNRGQPLVLNK 238
Query: 277 PPTLAGLAFEQAAWRLVEQDSMKAVMVEEEPKRRGFF 313
TL+G++FE AA RLV + K +V E +G
Sbjct: 239 KLTLSGISFENAARRLVGR---KEYLVNLETGNKGLL 272
>sp|P56346|MIND_CHLVU Putative septum site-determining protein MinD OS=Chlorella vulgaris
GN=minD PE=3 SV=1
Length = 282
Score = 290 bits (741), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/247 (64%), Positives = 196/247 (79%), Gaps = 6/247 (2%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
RV+VITSGKGGVGKTTTTAN+G+S+ARLG+ V IDAD+GLRNLDLLLGLENRV YT ++
Sbjct: 17 RVIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDADIGLRNLDLLLGLENRVLYTAMD 76
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFI 170
++ G CRLDQAL+RDKRW N LL ISK R K + K + +++++K E F+
Sbjct: 77 IVEGQCRLDQALIRDKRWKNLALLAISKNRQKYNVTR--KNMQNLIDSVK---ELGFQFV 131
Query: 171 LIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMVVNRVRT 230
LIDCPAGID GFI AI A EAV+VTTP+IT++RDADRV GLLE +GI ++K++VNRVR
Sbjct: 132 LIDCPAGIDVGFINAIASAQEAVIVTTPEITAIRDADRVAGLLEANGIYNVKLLVNRVRP 191
Query: 231 DMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAW 290
DMI+ DMMSV D+QEMLG+ LLG IPED+ VI STN+G PLVLNK TL+G+AFE AA
Sbjct: 192 DMIQKNDMMSVRDVQEMLGIPLLGAIPEDTSVIISTNKGEPLVLNKKLTLSGIAFENAAR 251
Query: 291 RLV-EQD 296
RL+ +QD
Sbjct: 252 RLIGKQD 258
>sp|Q3ZIZ0|MIND_PSEAK Putative septum site-determining protein MinD OS=Pseudendoclonium
akinetum GN=minD PE=3 SV=1
Length = 306
Score = 285 bits (730), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/249 (62%), Positives = 198/249 (79%), Gaps = 6/249 (2%)
Query: 49 TPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTV 108
+ R++V+TSGKGGVGKTT TAN+G+S+ARLG+ VV IDAD+GLRNLDLLLGLENR+ YTV
Sbjct: 40 SSRIIVVTSGKGGVGKTTATANIGMSIARLGYKVVLIDADIGLRNLDLLLGLENRILYTV 99
Query: 109 VEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPD 168
++V G CRLDQAL+RDKRW N LL ISK R + + K + +V+AL + +
Sbjct: 100 MDVFEGQCRLDQALIRDKRWKNLSLLSISKNRQRYNVT--RKNMQNLVKALANL---NFR 154
Query: 169 FILIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMVVNRV 228
+ILIDCPAGID GFI AI+PA EA++VTT +I ++RDADRV GLLE +GI DIK+++NRV
Sbjct: 155 YILIDCPAGIDVGFINAISPAQEALIVTTSEIPAIRDADRVAGLLEANGIFDIKLLINRV 214
Query: 229 RTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQA 288
R+D+I+ DMMSV D+QE+LG+ LLG IPED++VI STNRG PLVL K TL+G+AFE A
Sbjct: 215 RSDLIQKNDMMSVRDVQEVLGVPLLGAIPEDNQVIVSTNRGEPLVLKKKLTLSGIAFENA 274
Query: 289 AWRLV-EQD 296
A RLV +QD
Sbjct: 275 ARRLVGKQD 283
>sp|Q9T3P6|MIND_NEPOL Putative septum site-determining protein MinD OS=Nephroselmis
olivacea GN=minD-A PE=3 SV=1
Length = 274
Score = 277 bits (709), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 150/243 (61%), Positives = 188/243 (77%), Gaps = 5/243 (2%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
RV+VITSGKGGVGKTT TAN+G+ +ARLG+ V IDAD+GLRNLDLLLGLENRV YT +E
Sbjct: 14 RVIVITSGKGGVGKTTATANLGMCIARLGYRVALIDADIGLRNLDLLLGLENRVVYTAME 73
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFI 170
V+ G CRL+QAL+RDKRW N +L +SK R + + K + +V+++K R +I
Sbjct: 74 VIEGQCRLEQALIRDKRWKNLSMLAMSKNRQRYNMTR--KNMMMIVDSIKER---GYQYI 128
Query: 171 LIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMVVNRVRT 230
LIDCPAGIDAGF+ AI PA+EA+LVTTP+IT++RDADRV GLLE + ++++V NRVR
Sbjct: 129 LIDCPAGIDAGFVNAIAPADEAILVTTPEITAIRDADRVAGLLEANDFYNVRLVANRVRP 188
Query: 231 DMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAW 290
+MI+ DMMSV D+Q M+G+ LLG IPED VI STNRG PLV K TLAG+AFE+AA
Sbjct: 189 EMIQQNDMMSVDDVQGMIGVPLLGAIPEDKNVIISTNRGEPLVCQKTITLAGVAFEEAAR 248
Query: 291 RLV 293
RLV
Sbjct: 249 RLV 251
>sp|O78436|MIND_GUITH Putative septum site-determining protein MinD OS=Guillardia theta
GN=minD PE=3 SV=1
Length = 269
Score = 254 bits (648), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/246 (58%), Positives = 186/246 (75%), Gaps = 6/246 (2%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
R+VVITSGKGGVGKTT TAN+G++LA+LG+ IDAD+GLRNLDLLLGLENRV YT +E
Sbjct: 3 RIVVITSGKGGVGKTTVTANLGMALAQLGYRTALIDADIGLRNLDLLLGLENRVIYTALE 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFI 170
VL+G+CRL+QAL++DKR N LL ++ R+K + + + ++V L + D++
Sbjct: 63 VLSGECRLEQALIKDKRQPNLVLLPAAQNRNKDSVT--EEQMKFLVNLLVN----DYDYL 116
Query: 171 LIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMVVNRVRT 230
LIDCPAGI+ GF AI PA EA++VTTP+I ++RDADRV GLLE +GI+ IK++VNR+R
Sbjct: 117 LIDCPAGIETGFHNAIGPAQEAIVVTTPEIAAVRDADRVIGLLEANGIKQIKLLVNRLRP 176
Query: 231 DMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAW 290
M+K DMMSV D++E+L + L+GVIPED VI STNRG PLVL K +L GLAFE A
Sbjct: 177 QMVKANDMMSVADVREILAIPLIGVIPEDECVIVSTNRGEPLVLEKNLSLPGLAFEHTAC 236
Query: 291 RLVEQD 296
RL Q+
Sbjct: 237 RLDGQE 242
>sp|Q4G386|MIND_EMIHU Putative septum site-determining protein MinD OS=Emiliania huxleyi
GN=minD PE=3 SV=1
Length = 272
Score = 237 bits (604), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 182/243 (74%), Gaps = 6/243 (2%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
R++VITSGKGGVGKTTTT+N+G++LA+L V+ +DADVGL+NLDLLLGLENR+ Y ++
Sbjct: 3 RIIVITSGKGGVGKTTTTSNIGIALAKLEQRVLLLDADVGLKNLDLLLGLENRIVYNGLD 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFI 170
VLNG+CRL QAL++DKR N +S + KLP+ + + +V+ LK+ DFI
Sbjct: 63 VLNGECRLTQALIQDKRQPNLTFFPLSSNQLKLPVT--KEQINDLVDQLKNNY----DFI 116
Query: 171 LIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMVVNRVRT 230
LID PAGID GF AI A EA++V TP++TS+RDAD+V GLLE GI DI +++NR+R
Sbjct: 117 LIDSPAGIDEGFQVAIHTAKEAIVVVTPEVTSIRDADKVIGLLEAKGITDISLIINRLRP 176
Query: 231 DMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAW 290
+M+K E+MMSV D++++LG+ L+GV+P+ +VI ++NRG PLVL+ ++ GLAF A
Sbjct: 177 EMVKAENMMSVTDVKDILGIPLIGVVPDSEQVITASNRGEPLVLDDKVSIPGLAFINTAR 236
Query: 291 RLV 293
R++
Sbjct: 237 RIM 239
>sp|Q55900|MIND_SYNY3 Septum site-determining protein MinD OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=minD PE=3 SV=1
Length = 266
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/246 (52%), Positives = 181/246 (73%), Gaps = 6/246 (2%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
R++V+TSGKGGVGKTTTTAN+G +LARLG VV IDAD GLRNLDLLLGLE R+ YT ++
Sbjct: 3 RIIVVTSGKGGVGKTTTTANLGAALARLGKKVVLIDADFGLRNLDLLLGLEQRIVYTAID 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFI 170
VL +C +D+ALV+DKR N LL ++ RSK + + +VE LK + D+I
Sbjct: 63 VLADECTIDKALVKDKRLPNLVLLPAAQNRSKD--AINAEQMQSLVEQLKDKF----DYI 116
Query: 171 LIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMVVNRVRT 230
+IDCPAGI+AGF A+ PA EA++VTTP+++++RDADRV GLLE + I I ++VNR+R
Sbjct: 117 IIDCPAGIEAGFRNAVAPAQEAIIVTTPEMSAVRDADRVIGLLEAEDIGKISLIVNRLRP 176
Query: 231 DMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAW 290
+M++ M+SV DI ++L + L+G++P+D ++I STN+G PLV+ + ++ GLAF+ A
Sbjct: 177 EMVQLNQMISVEDILDLLAVPLIGILPDDQKIIISTNKGEPLVMEEKLSVPGLAFQNIAR 236
Query: 291 RLVEQD 296
RL QD
Sbjct: 237 RLEGQD 242
>sp|Q01464|MIND_BACSU Septum site-determining protein MinD OS=Bacillus subtilis (strain
168) GN=minD PE=1 SV=1
Length = 268
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 181/269 (67%), Gaps = 10/269 (3%)
Query: 53 VVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVL 112
+VITSGKGGVGKTTT+AN+G +LA LG V +D D+GLRNLD+++GLENR+ Y +V+V+
Sbjct: 5 IVITSGKGGVGKTTTSANLGTALAILGKRVCLVDTDIGLRNLDVVMGLENRIIYDLVDVV 64
Query: 113 NGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFILI 172
G C++ QALV+DKR+ + L + ++ + + +V+ LK D+++I
Sbjct: 65 EGRCKMHQALVKDKRFDDL-LYLMPAAQTSDKTAVAPEQIKNMVQELKQ----EFDYVII 119
Query: 173 DCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLEC-DGIRDIKMVVNRVRTD 231
DCPAGI+ G+ A++ A++A++VTTP+I+++RDADR+ GLLE + I ++VVNR+R
Sbjct: 120 DCPAGIEQGYKNAVSGADKAIVVTTPEISAVRDADRIIGLLEQEENIEPPRLVVNRIRNH 179
Query: 232 MIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWR 291
++K D M + +I + L + LLG++ +D EVI+++N G P+ ++ P A +A+ A R
Sbjct: 180 LMKNGDTMDIDEIVQHLSIDLLGIVADDDEVIKASNHGEPIAMD-PKNRASIAYRNIARR 238
Query: 292 LVEQDSMKAVMVEEEPK--RRGFFSFFGL 318
++ + S+ ++EE+ K SFFG+
Sbjct: 239 ILGE-SVPLQVLEEQNKGMMAKIKSFFGV 266
>sp|O25098|MIND_HELPY Septum site-determining protein MinD OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=minD PE=3 SV=1
Length = 268
Score = 202 bits (514), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 175/270 (64%), Gaps = 19/270 (7%)
Query: 52 VVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEV 111
VV ITSGKGGVGK+TTTAN+ + LA G VVA+D D+GLRNLD++LGLENR+ Y VV+V
Sbjct: 4 VVTITSGKGGVGKSTTTANLAIGLAESGKKVVAVDFDIGLRNLDMILGLENRIVYDVVDV 63
Query: 112 LNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFIL 171
+ +C L QAL+ DK+ N L S+ + K L + + ++ AL++ D+IL
Sbjct: 64 MEKNCNLSQALITDKKTKNLSFLAASQSKDKNIL--DKEKVAILINALRA----DFDYIL 117
Query: 172 IDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIK-------MV 224
ID PAGI++GF AI A+ A++V TP+++SLRD+DRV G+++ R K ++
Sbjct: 118 IDSPAGIESGFEHAILHADMALVVVTPEVSSLRDSDRVVGIIDAKSNRAKKGMEVHKHLI 177
Query: 225 VNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLA 284
+NR++ +++ +M+S+ ++ ++L L L+G+IPED +I +TN+G P++ + + A
Sbjct: 178 INRLKPELVANGEMISIEEVLKILCLPLIGIIPEDHHIISATNKGEPVI--RTDCESAKA 235
Query: 285 FEQAAWRLVEQDSMKAVMVEEEPKRRGFFS 314
+++ R++ ++ V E +RGFFS
Sbjct: 236 YQRITRRILGEE----VEYVEFKAKRGFFS 261
>sp|Q9ZMA8|MIND_HELPJ Septum site-determining protein MinD OS=Helicobacter pylori (strain
J99) GN=minD PE=3 SV=1
Length = 268
Score = 201 bits (510), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 174/270 (64%), Gaps = 19/270 (7%)
Query: 52 VVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEV 111
VV ITSGKGGVGK+TTTAN+ + LA G VVA+D D+GLRNLD++LGLENR+ Y VV+V
Sbjct: 4 VVTITSGKGGVGKSTTTANLAIGLAESGKKVVAVDFDIGLRNLDMILGLENRIVYDVVDV 63
Query: 112 LNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFIL 171
+ +C L QAL+ DK+ N L S+ + K L + + ++ AL++ D+IL
Sbjct: 64 MEKNCNLSQALITDKKTKNLSFLAASQSKDKNIL--DKEKVAILINALRA----DFDYIL 117
Query: 172 IDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIR-------DIKMV 224
ID PAGI++GF AI A+ A++V TP+++SLRD+DRV G+++ R ++
Sbjct: 118 IDSPAGIESGFEHAILHADMALVVVTPEVSSLRDSDRVIGIIDAKSNRAKSGEEVHKHLI 177
Query: 225 VNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLA 284
+NR++ +++ +M+S+ ++ ++L L L+G+IPED +I +TN+G P++ + + A
Sbjct: 178 INRLKPELVANGEMISIEEVLKILCLPLIGIIPEDHHIISATNKGEPVI--RTDCESAKA 235
Query: 285 FEQAAWRLVEQDSMKAVMVEEEPKRRGFFS 314
+++ R++ ++ V E +RGFFS
Sbjct: 236 YQRITRRILGEE----VEYVEFKAKRGFFS 261
>sp|Q8K9L7|MIND_BUCAP Septum site-determining protein MinD OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=minD PE=3 SV=3
Length = 270
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 167/275 (60%), Gaps = 22/275 (8%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
R++V+TSGKGGVGKTT++A + LA+ G V ID D+GLRNLDL++G E RV Y +
Sbjct: 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFIN 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGG--KALTWVVEALKSRQEGSPD 168
V+ GD R+ QAL++DK+ N +L S+ R K L + G K L ++ D
Sbjct: 63 VIQGDARIQQALIKDKKTKNLFILPASQTRDKESLTYSGVEKVLNQLINM-------EFD 115
Query: 169 FILIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIK------ 222
FI+ D PAGI+ G I AI A+EA++ T P+++S+RD+DR+ G++ R K
Sbjct: 116 FIICDSPAGIETGAILAIYFADEAIVTTNPEVSSVRDSDRILGIISSKSKRSEKNITPIK 175
Query: 223 --MVVNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTL 280
+++ R +K +M+S+ D+ E+L + ++GVIPED+ V+R++N+G ++L++
Sbjct: 176 EYLLLTRYNPTRVKKGEMLSMKDVIEILRIPIIGVIPEDASVLRASNQGESIILDQNSN- 234
Query: 281 AGLAFEQAAWRLVEQDSMKAVMVEEEPK---RRGF 312
AG A+ RL+ ++ K +EEE K RR F
Sbjct: 235 AGSAYFDTVNRLLGENH-KFRFIEEEKKSFLRRLF 268
>sp|Q9X2I3|MIND_THEMA Septum site-determining protein MinD OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=minD PE=3
SV=1
Length = 271
Score = 186 bits (471), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 156/244 (63%), Gaps = 9/244 (3%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
V+V+TSGKGGVGKTT TAN+G +LA+LG V IDAD+GL+NLD++LGLENR+ YT+++
Sbjct: 3 NVIVVTSGKGGVGKTTITANLGCALAKLGEKVCLIDADIGLKNLDIVLGLENRIVYTMID 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFI 170
V+NG +ALV+ K N LL S+ +K + + +V+ L D+I
Sbjct: 63 VVNGKVSPQEALVKHKMLKNLYLLPASQIATKEMI--SPNDMKAIVKELIPHF----DYI 116
Query: 171 LIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRD--IKMVVNRV 228
+ID PAGI+ GF A+ PA ++VTTP++ ++ DADRV GLLE G D I +++NR
Sbjct: 117 IIDSPAGIERGFRNAVAPAERVLVVTTPELPAISDADRVIGLLENFGFSDEKINVIINRF 176
Query: 229 RTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQA 288
+ M+K +M++ DI+ L L ++ VIP+ ++I ++N G P+ LN ++ FE
Sbjct: 177 KPHMVKKGEMLTTDDIKHTLSLEIIAVIPDSEDIIVASNTGIPVSLNGNSRISK-NFENL 235
Query: 289 AWRL 292
A R+
Sbjct: 236 ARRI 239
>sp|P57411|MIND_BUCAI Septum site-determining protein MinD OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=minD PE=3 SV=2
Length = 270
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 168/275 (61%), Gaps = 22/275 (8%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
R++V+TSGKGGVGKTT++A +G LA+ G + ID D+GLRNLDL++G E RV Y +
Sbjct: 3 RIIVVTSGKGGVGKTTSSAAIGTGLAQKGKKTIVIDFDIGLRNLDLIMGCERRVVYDFIN 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGG--KALTWVVEALKSRQEGSPD 168
V+ GD L+QA+++DK+ +N +L S+ R K L G K LT +++ + D
Sbjct: 63 VIQGDATLNQAIIKDKKTNNLFILPASQTRDKDALTRIGVEKVLTELIKM-------NFD 115
Query: 169 FILIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIK------ 222
FI+ D PAGI+ G I AI A+EA++ T P+++S+RD+DR+ G++ R K
Sbjct: 116 FIICDSPAGIETGAILAIYFADEAIITTNPEVSSVRDSDRILGIISSKSKRAEKNITPIK 175
Query: 223 --MVVNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTL 280
+++ R +K +M+S+ D+ ++L + ++GVIPED V+R++N+G ++L+
Sbjct: 176 EYLLLTRYNPRRVKKGEMLSMTDVLDILQIPIIGVIPEDQSVLRASNQGESIILDINSN- 234
Query: 281 AGLAFEQAAWRLVEQDSMKAVMVEEEPK---RRGF 312
AG A+ RL+ ++ +EEE K RR F
Sbjct: 235 AGCAYSDTVNRLLGEER-HFRFIEEEKKSFLRRLF 268
>sp|P0AEZ6|MIND_SHIFL Septum site-determining protein MinD OS=Shigella flexneri GN=minD
PE=3 SV=2
Length = 270
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 170/277 (61%), Gaps = 20/277 (7%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
R++V+TSGKGGVGKTT++A + LA+ G V ID D+GLRNLDL++G E RV Y V
Sbjct: 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFVN 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFI 170
V+ GD L+QAL++DKR N +L S+ R K L G A V++ LK+ +FI
Sbjct: 63 VIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGVA--KVLDDLKAM---DFEFI 117
Query: 171 LIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLEC------DGIRDIK-- 222
+ D PAGI+ G + A+ A+EA++ T P+++S+RD+DR+ G+L +G IK
Sbjct: 118 VCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEH 177
Query: 223 MVVNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAG 282
+++ R + DM+S+ D+ E+L + L+GVIPED V+R++N+G P++L+ AG
Sbjct: 178 LLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINAD-AG 236
Query: 283 LAFEQAAWRLV-EQDSMKAVMVEEEPKRRGFFS-FFG 317
A+ RL+ E+ + +EEE K GF FG
Sbjct: 237 KAYADTVERLLGEERPFR--FIEEEKK--GFLKRLFG 269
>sp|P0AEZ3|MIND_ECOLI Septum site-determining protein MinD OS=Escherichia coli (strain
K12) GN=minD PE=1 SV=2
Length = 270
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 170/277 (61%), Gaps = 20/277 (7%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
R++V+TSGKGGVGKTT++A + LA+ G V ID D+GLRNLDL++G E RV Y V
Sbjct: 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFVN 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFI 170
V+ GD L+QAL++DKR N +L S+ R K L G A V++ LK+ +FI
Sbjct: 63 VIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGVA--KVLDDLKAM---DFEFI 117
Query: 171 LIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLEC------DGIRDIK-- 222
+ D PAGI+ G + A+ A+EA++ T P+++S+RD+DR+ G+L +G IK
Sbjct: 118 VCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEH 177
Query: 223 MVVNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAG 282
+++ R + DM+S+ D+ E+L + L+GVIPED V+R++N+G P++L+ AG
Sbjct: 178 LLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINAD-AG 236
Query: 283 LAFEQAAWRLV-EQDSMKAVMVEEEPKRRGFFS-FFG 317
A+ RL+ E+ + +EEE K GF FG
Sbjct: 237 KAYADTVERLLGEERPFR--FIEEEKK--GFLKRLFG 269
>sp|P0AEZ4|MIND_ECOL6 Septum site-determining protein MinD OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=minD PE=3 SV=2
Length = 270
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 170/277 (61%), Gaps = 20/277 (7%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
R++V+TSGKGGVGKTT++A + LA+ G V ID D+GLRNLDL++G E RV Y V
Sbjct: 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFVN 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFI 170
V+ GD L+QAL++DKR N +L S+ R K L G A V++ LK+ +FI
Sbjct: 63 VIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGVA--KVLDDLKAM---DFEFI 117
Query: 171 LIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLEC------DGIRDIK-- 222
+ D PAGI+ G + A+ A+EA++ T P+++S+RD+DR+ G+L +G IK
Sbjct: 118 VCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEH 177
Query: 223 MVVNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAG 282
+++ R + DM+S+ D+ E+L + L+GVIPED V+R++N+G P++L+ AG
Sbjct: 178 LLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINAD-AG 236
Query: 283 LAFEQAAWRLV-EQDSMKAVMVEEEPKRRGFFS-FFG 317
A+ RL+ E+ + +EEE K GF FG
Sbjct: 237 KAYADTVERLLGEERPFR--FIEEEKK--GFLKRLFG 269
>sp|P0AEZ5|MIND_ECO57 Septum site-determining protein MinD OS=Escherichia coli O157:H7
GN=minD PE=3 SV=2
Length = 270
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 170/277 (61%), Gaps = 20/277 (7%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
R++V+TSGKGGVGKTT++A + LA+ G V ID D+GLRNLDL++G E RV Y V
Sbjct: 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFVN 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFI 170
V+ GD L+QAL++DKR N +L S+ R K L G A V++ LK+ +FI
Sbjct: 63 VIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGVA--KVLDDLKAM---DFEFI 117
Query: 171 LIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLEC------DGIRDIK-- 222
+ D PAGI+ G + A+ A+EA++ T P+++S+RD+DR+ G+L +G IK
Sbjct: 118 VCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEH 177
Query: 223 MVVNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAG 282
+++ R + DM+S+ D+ E+L + L+GVIPED V+R++N+G P++L+ AG
Sbjct: 178 LLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINAD-AG 236
Query: 283 LAFEQAAWRLV-EQDSMKAVMVEEEPKRRGFFS-FFG 317
A+ RL+ E+ + +EEE K GF FG
Sbjct: 237 KAYADTVERLLGEERPFR--FIEEEKK--GFLKRLFG 269
>sp|Q7DDS7|MIND_NEIMB Septum site-determining protein MinD OS=Neisseria meningitidis
serogroup B (strain MC58) GN=minD PE=1 SV=1
Length = 271
Score = 175 bits (444), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 168/276 (60%), Gaps = 17/276 (6%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
+++V+TSGKGGVGKTTT+A++ LA G+ ID DVGLRNLDL++G E RV Y ++
Sbjct: 3 KIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLRNLDLIMGCERRVVYDLIN 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFI 170
V+ G+ L+QAL++DK N +L S+ R K L G + V++ L ++ G ++I
Sbjct: 63 VIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREG--VEKVMQELSGKKMGF-EYI 119
Query: 171 LIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLL-------ECDGIRDIKM 223
+ D PAGI+ G + A+ A+EA++ T P+++S+RD+DR+ G+L E G +
Sbjct: 120 ICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILGILQSKSHKAEQGGSVKEHL 179
Query: 224 VVNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGL 283
++ R + + +M+SV DI ++L + LLGVIPE V++++N G P V+++ A
Sbjct: 180 LITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNVLQASNSGEP-VIHQDSVAASE 238
Query: 284 AFEQAAWRLV-EQDSMKAVMVEEEPKRRGFFS-FFG 317
A++ RL+ E M+ + E +++ FF FG
Sbjct: 239 AYKDVIARLLGENREMRFL----EAEKKSFFKRLFG 270
>sp|Q89AI3|MIND_BUCBP Septum site-determining protein MinD OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=minD PE=3 SV=3
Length = 270
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 155/253 (61%), Gaps = 18/253 (7%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
R++V+TSGKGGVGKTT++A + A+ G V ID D+GLRNLDL++G E RV Y +
Sbjct: 3 RIIVVTSGKGGVGKTTSSAALATGFAKKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFIN 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGG--KALTWVVEALKSRQEGSPD 168
V+NG+ L+QAL++DKR +L S+ R+K L G + T +V + D
Sbjct: 63 VINGEAILNQALIKDKRTEGLFILPASQTRNKNALTKSGIDRVFTQLVNM-------NFD 115
Query: 169 FILIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIK------ 222
I+ D PAGI++G + AI ++EA+++T P+++S+RD+DR+ G++ R +
Sbjct: 116 IIICDSPAGIESGAVLAIYFSDEAIVITNPEVSSVRDSDRILGIIASTSQRSSQNFKPIK 175
Query: 223 --MVVNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTL 280
+++ R + DM+S D+ ++L + L+GVIPED+ V++++N+G P++LN
Sbjct: 176 EHLLLTRYNPKRVSNGDMLSTEDVLDILRIPLIGVIPEDTSVLKASNQGTPVILNYNSN- 234
Query: 281 AGLAFEQAAWRLV 293
AG A+ RL+
Sbjct: 235 AGQAYYDTVNRLL 247
>sp|Q57967|Y547_METJA Uncharacterized ATP-binding protein MJ0547 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0547 PE=4 SV=1
Length = 264
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 142/271 (52%), Gaps = 30/271 (11%)
Query: 53 VVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVL 112
+ I SGKGG GKTT +AN+ ++LA+ G V +DAD+ + NL+L++GLE + T+ +VL
Sbjct: 9 IAIASGKGGTGKTTISANLAVALAKFGKKVAVLDADIAMANLELIMGLEGK-PVTLNDVL 67
Query: 113 NGDCRLDQALVRDKRWSNFELLCI-------SKPRSKLPLGFGGKALTWVVEALKSRQEG 165
G +A ++D + E + + K R P + L V++A+ E
Sbjct: 68 AG-----KADIKDAIYEGPEGVLVIPAGVSLEKFRRAKP-----EKLEEVLKAIHDLVE- 116
Query: 166 SPDFILIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMVV 225
++IDCPAGI + AI+ A+ ++V P+I+S+ DA ++ + + G I +V
Sbjct: 117 ---ILIIDCPAGIGKETLIAISSADGLIVVVNPEISSISDALKIIAITKRLGTDIIGAIV 173
Query: 226 NRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAF 285
NRV + + + V I+ +L + ++GV+PED V ++ G PLV+ P + A A
Sbjct: 174 NRVSNESTE----LGVKAIETILEVPVIGVVPEDPHVRKAAAFGTPLVIMYPDSPAAQAI 229
Query: 286 EQAAWRLVEQDSMKAVMVEEEPKRRGFFSFF 316
+ A +L+ + + K+ F S F
Sbjct: 230 MEIAAKLIGAK----YEAQLKKKKESFISKF 256
>sp|Q57633|Y169_METJA Uncharacterized ATP-binding protein MJ0169 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0169 PE=4 SV=1
Length = 263
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 130/238 (54%), Gaps = 12/238 (5%)
Query: 52 VVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEV 111
++ I SGKGGVGKTTT+A++ ++LA+LG V+AID D+ + NL +L +E + ++ EV
Sbjct: 5 IITIASGKGGVGKTTTSASLAVALAKLGKKVLAIDGDISMANLGILFNMEKK-KPSLHEV 63
Query: 112 LNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGSPDFIL 171
L+ ++A VRD + + + + P S G+ + + + + + D+++
Sbjct: 64 LS-----EEADVRDAIYKHKTGVYVL-PTSLSLEGYKKSDIDLLPDVVNEVAD-DFDYVI 116
Query: 172 IDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMVVNRVRTD 231
ID PAG++ T + A++ +LV TP++ S+ DA R+ E G + +V+NRV D
Sbjct: 117 IDAPAGLNREMATHLAIADKLLLVVTPEMFSIIDAVRLKESAEMAGTPLMGVVLNRVGRD 176
Query: 232 MIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAA 289
GE M +I+ ++ +L +PED V + + ++ + + A A+ + A
Sbjct: 177 F--GE--MGRDEIEMLIKGKVLVEVPEDENVRSAALKKMSVIEYRKNSPASQAYMKLA 230
>sp|O25678|YLXH_HELPY Flagellum site-determining protein YlxH OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=ylxH PE=3 SV=1
Length = 294
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 22/164 (13%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
+ + ITSGKGGVGK+ +AN+ SL + G+ V DAD+GL NLD++ G++ N ++
Sbjct: 28 KFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVKTHKN--ILH 85
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKL-PLGFGGKALTWV--VEALKS--RQEG 165
L G+ +L E++C +P L P G + L ++ EAL +EG
Sbjct: 86 ALKGEAKLQ------------EIICEIEPGLCLIPGDSGEEILKYISGAEALDQFVDEEG 133
Query: 166 ---SPDFILIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDA 206
S D+I++D AGI A + ++ V+VTTPD +++ DA
Sbjct: 134 VLSSLDYIVVDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDA 177
>sp|P40742|YLXH_BACSU Flagellum site-determining protein YlxH OS=Bacillus subtilis
(strain 168) GN=ylxH PE=1 SV=1
Length = 298
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 22/267 (8%)
Query: 43 PELAGETPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLEN 102
P + + + + + SGKGGVGK+ T N+ L+L G V+ ID D+G+ N+D+L+G N
Sbjct: 24 PMVYSQKAKTLAVISGKGGVGKSNITLNMALALQDKGKKVLLIDLDIGMGNIDILIG--N 81
Query: 103 RVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALK-S 161
+ T+++VL L Q+L + L IS + L + F W A + S
Sbjct: 82 SSSATIIDVLTDRKPLLQSLSVGPKG----LRYISGG-TGLDVMFQLDQRKWTFFANELS 136
Query: 162 RQEGSPDFILIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDA-DRVTGLLECDGIRD 220
D++L D AG+ + I A + +++TTP+ T++ DA V L+ +
Sbjct: 137 HALSQFDYVLFDMGAGLSKDQLPFILSAEDILIITTPEPTAIMDAYSAVKHLVLTENKLS 196
Query: 221 IKMVVNRVRTDMIKGEDMMS--------VLDIQEMLGLALLGVIPEDSEVIRSTNRGYPL 272
+K+ VNR R D +G D + LD+Q + G + +D V ++ P
Sbjct: 197 MKVAVNRCR-DQKEGLDAFARLSRTIHMFLDVQ----VQFAGSVSDDVIVSKAVVEQVPF 251
Query: 273 VLNKPPTLAGLAFEQAAWRLVEQDSMK 299
+ P A + A L E++ +
Sbjct: 252 FIKSPQAKASRSVRILADALFEREETR 278
>sp|O24999|MRP_HELPY Protein mrp homolog OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=mrp PE=3 SV=2
Length = 368
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 43/270 (15%)
Query: 45 LAGETPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRV 104
LA VV+I+SGKGGVGK+TT+ N+ ++LA L V +DADV N+ ++GL+
Sbjct: 92 LAKNIKHVVMISSGKGGVGKSTTSVNLSIALANLNQKVGLLDADVYGPNIPRMMGLQ--- 148
Query: 105 NYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTW--------VV 156
+ D +D + K+ + +S L L G++L W +
Sbjct: 149 --------SADVIMDPS---GKKLIPLKAFGVSVMSMGL-LYDEGQSLIWRGPMLMRAIE 196
Query: 157 EALKSRQEGSPDFILIDCPAGI-DAGFITA-ITPANEAVLVTTPDITSLRDADR------ 208
+ L G D +++D P G DA A P + + VTTP I SL DA R
Sbjct: 197 QMLSDIIWGDLDVLVVDMPPGTGDAQLTLAQAVPLSAGITVTTPQIVSLDDAKRSLDMFK 256
Query: 209 -----VTGLLECDGIRDIKMVVNRVRTDM-IKGEDMMSVLDIQEMLGLALLGVIPEDSEV 262
+ G++E G V + + I G + MS ++ E +L +P + +V
Sbjct: 257 KLHIPIAGIVENMG----SFVCEHCKKESEIFGSNSMS--ELLEAYHTQILAKLPLEPKV 310
Query: 263 IRSTNRGYPLVLNKPPTLAGLAFEQAAWRL 292
+RG P+V++ P +++ FE+ A L
Sbjct: 311 RLGGDRGEPIVISHPNSVSAKIFEKMAQDL 340
>sp|Q9ZMM5|MRP_HELPJ Protein mrp homolog OS=Helicobacter pylori (strain J99) GN=mrp PE=3
SV=1
Length = 368
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 123/270 (45%), Gaps = 43/270 (15%)
Query: 45 LAGETPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRV 104
LA VV+I+SGKGGVGK+TT+ N+ ++LA L V +DADV N+ ++GL+N
Sbjct: 92 LAKNIKHVVMISSGKGGVGKSTTSVNLSIALANLNQKVGLLDADVYGPNIPRMMGLQN-- 149
Query: 105 NYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTW--------VV 156
D +D + K+ + +S L L G++L W +
Sbjct: 150 ---------ADVIMDPS---GKKLIPLKAFGVSVMSMGL-LYDEGQSLIWRGPMLMRAIE 196
Query: 157 EALKSRQEGSPDFILIDCPAGI-DAGFITA-ITPANEAVLVTTPDITSLRDADR------ 208
+ L G D +++D P G DA A P + + VTTP I SL DA R
Sbjct: 197 QMLSDIIWGDLDVLVVDMPPGTGDAQLTLAQAVPLSAGITVTTPQIVSLDDAKRSLDMFK 256
Query: 209 -----VTGLLECDGIRDIKMVVNRVRTDM-IKGEDMMSVLDIQEMLGLALLGVIPEDSEV 262
+ G++E G V + + I G + MS L E +L +P + +V
Sbjct: 257 KLHIPIAGIVENMG----SFVCEHCKKESEIFGSNSMSGL--LEAYNTQILAKLPLEPKV 310
Query: 263 IRSTNRGYPLVLNKPPTLAGLAFEQAAWRL 292
++G P+V++ P +++ FE+ A L
Sbjct: 311 RLGGDKGEPIVISHPTSVSAKIFEKMAKDL 340
>sp|Q57731|Y283_METJA Uncharacterized ATP-binding protein MJ0283 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0283 PE=3 SV=1
Length = 290
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 24/255 (9%)
Query: 53 VVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVL 112
+VI SGKGGVGK+T T N+ +L +G V +DAD+ N+ +LG+EN + +
Sbjct: 42 IVILSGKGGVGKSTVTVNLAAALNLMGKKVGVLDADIHGPNIPKMLGVEN------TQPM 95
Query: 113 NGDCRLDQALVRD--KRWSNFELLCISKPRSKLPLGFGGKALTWVV-EALKSRQEGSPDF 169
G + + +D K S LL P K P+ + G ++ + + L G D+
Sbjct: 96 AGPAGIFPIVTKDGIKTMSIGYLL----PDDKTPVIWRGPKVSGAIRQFLSDVVWGELDY 151
Query: 170 ILIDCPAGIDAGFIT---AITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMVVN 226
+LID P G +T +I + A++VTTP+ S+ D + + + I I ++ N
Sbjct: 152 LLIDTPPGTGDEQLTIMQSIPDIDGAIIVTTPEEVSVLDVKKSIMMAKMLNIPIIGIIEN 211
Query: 227 RVRTDMIKGEDMMSVL------DIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTL 280
++ + + LG+ LG IP D + ++++G P+VL
Sbjct: 212 MSGFVCPYCNKVVDIFGRGGGEKAAKELGVEFLGRIPLDIKAREASDKGIPMVLLD--CK 269
Query: 281 AGLAFEQAAWRLVEQ 295
A F++ R+VE+
Sbjct: 270 ASEEFKKIVKRIVEK 284
>sp|B1LSF9|BCHL_METRJ Light-independent protochlorophyllide reductase iron-sulfur
ATP-binding protein OS=Methylobacterium radiotolerans
(strain ATCC 27329 / DSM 1819 / JCM 2831) GN=bchL PE=3
SV=1
Length = 297
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 25/296 (8%)
Query: 34 QSVLQWNRKPELAGETPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRN 93
+ LQ P+L ET +V + GKGG+GK+TT++N+ ++ ++LG V+ I D
Sbjct: 15 EGSLQVALDPDLKIETAKVFAVY-GKGGIGKSTTSSNLSVAFSKLGKRVLQIGCD---PK 70
Query: 94 LDLLLGLENRVNYTVVEVLNG-DCRLDQALVRDKRWSNFE-LLCISKPRSKLPLGFGGKA 151
D L R+ TV++ L + ++ V D + ++C+ G GG
Sbjct: 71 HDSTFTLTKRLAPTVIDALEAVNFHSEELRVEDFVVEGYNGVMCVEAGGPPAGTGCGGYV 130
Query: 152 LTWVVEALKSRQ-EGSPDFILIDCPAG-IDAGFITAITPANEAVLVTTPDITSLRDADRV 209
+ V+ LK D ++ D + GF + + A+ A++VT D S+ +R+
Sbjct: 131 VGQTVKLLKEHHLLEDTDVVVFDVLGDVVCGGFASPLQHADRALIVTANDFDSIFAMNRI 190
Query: 210 TGLLECD----GIRDIKMVVNR-VRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIR 264
+ G+R ++ NR +TD I + +GL L P+ V R
Sbjct: 191 VAAIHAKSKNYGVRLGGVIANRSAKTDEID--------RFNDAVGLKRLAHFPDLDVVRR 242
Query: 265 STNRGYPLV-LNKPPTLAGLAFEQAAWRLVEQDSMKAVMVEEEP-KRRGFFSFFGL 318
S + L + P L + E RL E A E +P K R F F G
Sbjct: 243 SRLKKSTLFEMESSPELDAVTAEY--MRLAETLWAGAEPCEAQPMKDRDLFEFLGF 296
>sp|P53383|MRP_SYNY3 Protein mrp homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=mrp PE=3 SV=1
Length = 353
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 28/272 (10%)
Query: 47 GETPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNY 106
G+ ++ I+SGKGGVGK+T NV ++LA+ G +V +DAD+ N +LGL
Sbjct: 94 GQVKNIIAISSGKGGVGKSTVAVNVAVALAQTGAAVGLLDADIYGPNAPTMLGLSG---- 149
Query: 107 TVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVV-EALKSRQEG 165
V+V N V + + + P P+ + G L ++ + L G
Sbjct: 150 AAVQVQNSPQGEVLEPVFNHGIKMVSMGFLIDPDQ--PVIWRGPMLNGIIRQFLYQVNWG 207
Query: 166 SPDFILIDCPAGI-DAGF-ITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKM 223
+ D++++D P G DA +T P AV+VTTP SL DA R + + G+ + +
Sbjct: 208 ALDYLIVDMPPGTGDAQLTLTQSVPMAGAVIVTTPQTVSLLDARRGLKMFQQMGVNVLGI 267
Query: 224 VVNRV----------RTDMI---KGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGY 270
V N + D+ GE L++ LLG +P + + ++G
Sbjct: 268 VENMSYFIPPDLPDRQYDLFGSGGGEKASKELNV------PLLGCVPLEIGLREGGDKGV 321
Query: 271 PLVLNKPPTLAGLAFEQAAWRLVEQDSMKAVM 302
P+V+++P + + A A ++ + SM A++
Sbjct: 322 PIVVSQPESASAKALTAIAKQIAGKVSMAALV 353
>sp|Q9Y5Y2|NUBP2_HUMAN Cytosolic Fe-S cluster assembly factor NUBP2 OS=Homo sapiens
GN=NUBP2 PE=1 SV=1
Length = 271
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 24/259 (9%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
++++ SGKGGVGK+T + + L+L G V +D D+ ++ +LG + R +
Sbjct: 15 HIILVLSGKGGVGKSTISTELALALRHAGKKVGILDVDLCGPSIPRMLGAQGRAVH---- 70
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCI----SKPRSKLPLGFGGKALTWVVEALKSRQEGS 166
C A V R + L+ + KP + + G K + + + G
Sbjct: 71 ----QCDRGWAPVFLDREQSISLMSVGFLLEKPDEAV-VWRGPKKNALIKQFVSDVAWGE 125
Query: 167 PDFILIDCPAGI---DAGFITAITPANE--AVLVTTPDITSLRDADRVTGLLECDGIRDI 221
D++++D P G I A+ P A++VTTP S+ D R G+R +
Sbjct: 126 LDYLVVDTPPGTSDEHMATIEALRPYQPLGALVVTTPQAVSVGDVRRELTFCRKTGLRVM 185
Query: 222 KMVVNRVRTDMIKGEDMMSVL------DIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLN 275
+V N + SV ++ ++ G+ LG +P D ++R+ G+ +
Sbjct: 186 GIVENMSGFTCPHCTECTSVFSRGGGEELAQLAGVPFLGSVPLDPALMRTLEEGHDFIQE 245
Query: 276 KPPTLAGLAFEQAAWRLVE 294
P + A A A ++++
Sbjct: 246 FPGSPAFAALTSIAQKILD 264
>sp|A1WXI6|BCHL_HALHL Light-independent protochlorophyllide reductase iron-sulfur
ATP-binding protein OS=Halorhodospira halophila (strain
DSM 244 / SL1) GN=bchL PE=3 SV=1
Length = 301
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 53 VVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVL 112
V GKGG+GK+TT++N+ ++ ++LG V+ I D D L R+ TV++ L
Sbjct: 36 VFAVYGKGGIGKSTTSSNLAVAFSQLGKRVLQIGCD---PKHDSTFTLTKRLVPTVIDSL 92
Query: 113 NG-DCRLDQALVRDKRWSNFE-LLCISKPRSKLPLGFGGKALTWVVEALKSRQ-EGSPDF 169
D +++ D + + +LC+ G GG + V+ LK D
Sbjct: 93 EEVDFHMEELRPEDYVYEGYNGVLCVEAGGPPAGTGCGGYVVGQTVKLLKQHHLLEETDV 152
Query: 170 ILIDCPAG-IDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDG----IRDIKMV 224
++ D + GF + A++A++VT D S+ +R+ G ++ +R ++
Sbjct: 153 VIFDVLGDVVCGGFAAPLQHADQALIVTANDFDSIFAMNRIAGAIQAKAKNYKVRLGGVI 212
Query: 225 VNRV-RTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRS 265
NR RTD I I E +GL L +P V RS
Sbjct: 213 ANRSERTDQID--------RINERIGLRTLAHVPNYDVVRRS 246
>sp|Q9L8J5|BCHL_RHORU Light-independent protochlorophyllide reductase iron-sulfur
ATP-binding protein OS=Rhodospirillum rubrum GN=bchL
PE=3 SV=1
Length = 290
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 22/270 (8%)
Query: 34 QSVLQWNRKPELAGETPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRN 93
+ +Q P L ET +V I GKGG+GK+TT++N+ + ++LG VV I D
Sbjct: 8 EGSVQVEMDPALHIETAKVFAIY-GKGGIGKSTTSSNLSAAFSKLGKRVVQIGCD---PK 63
Query: 94 LDLLLGLENRVNYTVVEVLNG-DCRLDQALVRDKRWSNFE-LLCISKPRSKLPLGFGGKA 151
D L R+ TV++VL ++ V D + + ++C+ G GG
Sbjct: 64 HDSTFTLTKRLVPTVIDVLQAVHFHTEELRVEDFVYEGYNGVMCVEAGGPPAGTGCGGYV 123
Query: 152 LTWVVEALKSRQ-EGSPDFILIDCPAG-IDAGFITAITPANEAVLVTTPDITSLRDADRV 209
+ V+ LK D ++ D + GF T + A A++V D S+ A+R+
Sbjct: 124 VGQTVKLLKEHHILEDADVVVFDVLGDVVCGGFATPLQHAERALVVAANDFDSIFAANRI 183
Query: 210 TGLLECDGIR-DIKM---VVNR-VRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIR 264
++ D+++ + NR V TD I+ + S G+ L P D +VIR
Sbjct: 184 AAAIQAKAKNYDVRLGGIIANRSVATDQIERFNARS--------GMRTLAHFP-DLDVIR 234
Query: 265 STNRGYPLVLNKPPTLAGLAFEQAAWRLVE 294
+ + P+ A +Q RL E
Sbjct: 235 RSRLCKSTLFEMEPSPELAAVQQEYLRLAE 264
>sp|Q2RWS1|BCHL_RHORT Light-independent protochlorophyllide reductase iron-sulfur
ATP-binding protein OS=Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255) GN=bchL PE=3 SV=1
Length = 295
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 22/270 (8%)
Query: 34 QSVLQWNRKPELAGETPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRN 93
+ +Q P L ET +V I GKGG+GK+TT++N+ + ++LG VV I D
Sbjct: 13 EGSVQVEMDPALHIETAKVFAIY-GKGGIGKSTTSSNLSAAFSKLGKRVVQIGCD---PK 68
Query: 94 LDLLLGLENRVNYTVVEVLNG-DCRLDQALVRDKRWSNFE-LLCISKPRSKLPLGFGGKA 151
D L R+ TV++VL ++ V D + + ++C+ G GG
Sbjct: 69 HDSTFTLTKRLVPTVIDVLQAVHFHTEELRVEDFVYEGYNGVMCVEAGGPPAGTGCGGYV 128
Query: 152 LTWVVEALKSRQ-EGSPDFILIDCPAG-IDAGFITAITPANEAVLVTTPDITSLRDADRV 209
+ V+ LK D ++ D + GF T + A A++V D S+ A+R+
Sbjct: 129 VGQTVKLLKEHHILEDADVVVFDVLGDVVCGGFATPLQHAERALVVAANDFDSIFAANRI 188
Query: 210 TGLLECDGIR-DIKM---VVNR-VRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIR 264
++ D+++ + NR V TD I+ + S G+ L P D +VIR
Sbjct: 189 AAAIQAKAKNYDVRLGGIIANRSVATDQIERFNARS--------GMRTLAHFP-DLDVIR 239
Query: 265 STNRGYPLVLNKPPTLAGLAFEQAAWRLVE 294
+ + P+ A +Q RL E
Sbjct: 240 RSRLCKSTLFEMEPSPELAAVQQEYLRLAE 269
>sp|B4N4D9|NUBP2_DROWI Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
willistoni GN=GK12055 PE=3 SV=1
Length = 261
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 20/186 (10%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
V+V+ SGKGGVGK+T + + L+L G V +D D+ ++ LLGLE Y
Sbjct: 7 NVIVVLSGKGGVGKSTVSTQLALALRHTGHKVGLLDIDLCGPSVPYLLGLEGSDIY---- 62
Query: 111 VLNGDCRLDQALV-----RDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEG 165
+ D V K + + + K R+ + G K + + L+ +
Sbjct: 63 ------QCDDGWVPIYTDESKTLAVMSIGFLLKSRTDPVIWRGPKKTMMIKQFLQDVKWD 116
Query: 166 SPDFILIDCPAGIDAGFITAI-----TPANEAVLVTTPDITSLRDADRVTGLLECDGIRD 220
D+++ID P G IT + P N A++VTTP +L D + + GI+
Sbjct: 117 ELDYLIIDTPPGTSDEHITVMECLREVPCNGAIIVTTPQGVALDDVRKEITFCKKTGIKL 176
Query: 221 IKMVVN 226
+ +V N
Sbjct: 177 LGIVEN 182
>sp|B4KY56|NUBP2_DROMO Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
mojavensis GN=GI13405 PE=3 SV=1
Length = 264
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 26/228 (11%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
V+V+ SGKGGVGK+T + + L+L G V +D D+ ++ LLGLE R Y
Sbjct: 7 NVIVVLSGKGGVGKSTVSTQLALALRATGHKVGLLDIDLCGPSVPHLLGLEGRDIY---- 62
Query: 111 VLNGDCRLDQALV-----RDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEG 165
+ D V K + + + K R+ + G K + + L +
Sbjct: 63 ------QCDDGWVPIYTDESKTLAVMSIGFLLKNRNDPVIWRGPKKTMMIKQFLTDVKWE 116
Query: 166 SPDFILIDCPAGIDAGFITAI-----TPANEAVLVTTPDITSLRDADRVTGLLECDGIRD 220
D+++ID P G IT + P N A++VTTP +L D + + GI+
Sbjct: 117 DLDYLIIDTPPGTSDEHITVMECMREVPCNGAIIVTTPQGVALDDVRKELTFCKKTGIKV 176
Query: 221 IKMVVNRVRTDMIKGEDMMSVL------DIQEMLGLALLGVIPEDSEV 262
+ +V N D ++ ++ ++ + LLG +P D V
Sbjct: 177 LGIVENMSGFVCPHCSDCTNIFSSFGGAELAQLAQVPLLGTLPIDPRV 224
>sp|B4H7P4|NUBP2_DROPE Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
persimilis GN=GL12799 PE=3 SV=1
Length = 255
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 23/225 (10%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
V+++ SGKGGVGK+T + + L+L G V +D D+ ++ LLGLE Y
Sbjct: 7 NVIIVLSGKGGVGKSTVSTQLALALRHSGHKVGLLDIDLCGPSVPFLLGLEGSNIY---- 62
Query: 111 VLNGDCRLDQALV-----RDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEG 165
+ D+ V K + + + K R+ + G K + + L +
Sbjct: 63 ------QCDEGWVPIYTDASKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIRQFLTDVKWE 116
Query: 166 SPDFILIDCPAGIDAGFITAI-----TPANEAVLVTTPDITSLRDADRVTGLLECDGIRD 220
D+++ID P G IT + P N A++VTTP +L D + + GI+
Sbjct: 117 ELDYLIIDTPPGTSDEHITVMECMREVPCNGAIIVTTPQSVALDDVRKEITFCKKTGIKL 176
Query: 221 IKMVVNRVRTDMIKGEDMMSV---LDIQEMLGLALLGVIPEDSEV 262
+ +V V + ++ S +++ ++ + LG +P D V
Sbjct: 177 LGIVEIFVCPNCTNCTNIFSSNGGVELAHLVQIPHLGTLPIDPRV 221
>sp|B4S591|BCHL_PROA2 Light-independent protochlorophyllide reductase iron-sulfur
ATP-binding protein OS=Prosthecochloris aestuarii
(strain DSM 271 / SK 413) GN=bchL PE=3 SV=1
Length = 275
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 52 VVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEV 111
+++ GKGG+GK+TTTAN+ +LA G V+ I D D L + TV+E
Sbjct: 3 LILAVYGKGGIGKSTTTANISAALALQGAKVLQIGCD---PKHDSTFPLTGTLQKTVIEA 59
Query: 112 LN----GDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQE--- 164
L+ L++ + + ++ + L P P G G V EA+K QE
Sbjct: 60 LDEVDFHHEELEKEDIIETGFAGIDALEAGGP----PAGSGCGGYV-VGEAVKLLQELGL 114
Query: 165 -GSPDFILIDCPAG-IDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIR-DI 221
D IL D + GF + A+ AV++ T D S+ A+R+ ++ +R +
Sbjct: 115 YDQYDVILFDVLGDVVCGGFSAPLNYADYAVIIATNDFDSIFAANRLCMAIQQKSVRYKV 174
Query: 222 KM---VVNRVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRST 266
K+ V NRV D +KG + E +G LL +P E+IR +
Sbjct: 175 KLAGIVANRV--DYVKGGGTNMLEQFSEKVGTKLLARVPY-HELIRKS 219
>sp|Q54F15|NUBPL_DICDI Iron-sulfur protein NUBPL OS=Dictyostelium discoideum GN=nubpl PE=3
SV=1
Length = 323
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 112/257 (43%), Gaps = 23/257 (8%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
++ ++S KGGVGK+T N+ L L+ SV +D DV ++ L++ L+N E
Sbjct: 58 NIIAVSSAKGGVGKSTCAVNIALGLSSHNLSVGLLDVDVFGPSIPLMMDLKNHEKPFTNE 117
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCISKP---RSKLPLGFGGKALTWVVEALKSRQE-GS 166
L+Q + N+ + C+S P+ + G + +E L + + G
Sbjct: 118 -------LNQMI----PLQNYGIKCMSMGFLVNEDDPIIWRGPMVGSALEKLLRQTDWGH 166
Query: 167 PDFILIDCPAGIDAGFITAI--TPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMV 224
D ++ D P G +T P AV+V+TP +L D R + + + + +V
Sbjct: 167 LDVLVCDLPPGTGDAILTMCQRVPLTGAVIVSTPQDVALADVVRGVNMFKKVEVPILGLV 226
Query: 225 VNRVRTDMIKGEDMMSVL------DIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPP 278
N + + + + + +G+ LG +P ++ +++ G P+ + +P
Sbjct: 227 ENMSYFNCPHCNESTHIFGNEGAKNTAKKMGINFLGDVPIHLQIRETSDSGKPITVTQPD 286
Query: 279 TLAGLAFEQAAWRLVEQ 295
+ ++ + +++Q
Sbjct: 287 SPQAKNYKDISKEIIKQ 303
>sp|B0XDJ0|NUBP2_CULQU Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Culex
quinquefasciatus GN=CPIJ017390 PE=3 SV=1
Length = 257
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 18/185 (9%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLE----NRVNY 106
++++ SGKGGVGK+T + + L+LA G V +D D+ ++ LLGLE ++
Sbjct: 7 HIILVLSGKGGVGKSTVSTQLALTLAESGHKVGLLDIDLCGPSVPFLLGLEGHDVHQCEQ 66
Query: 107 TVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEGS 166
V V +G D+R + + + K R + + G K + + L+
Sbjct: 67 GWVPVFSG---------ADQRLAVMSIGFLLKNRDEAVIWRGPKKTAMIKQFLEDVAWDE 117
Query: 167 PDFILIDCPAGIDAGFITAI-----TPANEAVLVTTPDITSLRDADRVTGLLECDGIRDI 221
D+++ID P G IT + A+ A++VTTP +L D + + GI +
Sbjct: 118 LDYLVIDTPPGTSDEHITVMECLKGVNADGAIIVTTPQEMALEDVRKEVTFCKKTGIAIL 177
Query: 222 KMVVN 226
+V N
Sbjct: 178 GIVEN 182
>sp|Q29DB7|NUBP2_DROPS Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA18483 PE=3 SV=2
Length = 258
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 20/186 (10%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
V+++ SGKGGVGK+T + + L+L G V +D D+ ++ LLGLE Y
Sbjct: 7 NVIIVLSGKGGVGKSTVSTQLALALRHSGHKVGLLDIDLCGPSVPFLLGLEGSNIY---- 62
Query: 111 VLNGDCRLDQALV-----RDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEG 165
+ D+ V K + + + K R+ + G K + + L +
Sbjct: 63 ------QCDEGWVPIYTDASKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIRQFLTDVKWE 116
Query: 166 SPDFILIDCPAGIDAGFITAI-----TPANEAVLVTTPDITSLRDADRVTGLLECDGIRD 220
D+++ID P G IT + P N A++VTTP +L D + + GI+
Sbjct: 117 ELDYLIIDTPPGTSDEHITVMECMREVPCNGAIIVTTPQSVALDDVRKEITFCKKTGIKL 176
Query: 221 IKMVVN 226
+ +V N
Sbjct: 177 LGIVEN 182
>sp|Q6CE48|IND1_YARLI Iron-sulfur protein IND1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=IND1 PE=1 SV=1
Length = 312
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 43/271 (15%)
Query: 26 PFSSKSSIQSVLQWNRKPELAGETPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAI 85
P S S+ + + R+PE + +V++S KGGVGK+T + N LSLA+ G V +
Sbjct: 43 PKSPASAPRIPRKTTRRPEPIAGVKKTIVVSSAKGGVGKSTVSVNTALSLAKRGLRVGLL 102
Query: 86 DADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPL 145
D D+ ++ + GL +G+ R+ + S F + +S +
Sbjct: 103 DVDIFGPSIPTMFGL------------SGEPRMTHE-GKLIPMSKFGIQVMS-------M 142
Query: 146 GF---GGKALTW----VVEALKSRQE----GSPDFILIDCPAGI-DAGFITAIT-PANEA 192
GF KA+ W V +AL+ + G+ D +++D P G D A T + A
Sbjct: 143 GFLVDPNKAVAWRGLLVQKALEQLLQDVDWGTLDVLVMDLPPGTGDVQLTIAQTVKIDGA 202
Query: 193 VLVTTPDITSLRDADRVTGLLECDGIRDIKMVVNRV--------RTDMIKGEDMMSVLDI 244
++V+TP +L D R L E + + +V N I G D +
Sbjct: 203 IIVSTPQDVALVDVVRGLDLFEKTYTKVLGLVQNMSVFVCPNCNHETHIFGVD--GAVSK 260
Query: 245 QEMLGLALLGVIPEDSEVIRSTNRGYPLVLN 275
+ GL +LG +P D ++ +++G P+ ++
Sbjct: 261 AKSRGLGVLGNVPLDPQICSQSDKGVPVAVS 291
>sp|Q59YD9|CFD1_CANAL Cytosolic Fe-S cluster assembly factor CFD1 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=CFD1 PE=3 SV=1
Length = 294
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 101/252 (40%), Gaps = 39/252 (15%)
Query: 43 PELAGETPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLEN 102
P+ +++I SGKGGVGK++ T V L+L GF+V +D D+ +L + G+EN
Sbjct: 10 PKSIEHVKHIILILSGKGGVGKSSVTTQVALTLVNKGFNVGVLDIDLTGPSLPRMFGVEN 69
Query: 103 R------VNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTW-- 154
+ + V V N + D + N L+ + LG G ++ W
Sbjct: 70 KQVHQSTQGWVPVSVYNNNNNQG----TDSKRGNLSLMSLG-----FLLGDRGNSVVWRG 120
Query: 155 ------VVEALKSRQEGSP----DFILIDCPAGIDAGFITA------ITPANEAVLVTTP 198
+ + LK GS D++LID P G I P + A++VTTP
Sbjct: 121 PKKTAMIKQFLKDVVWGSTETPLDYLLIDTPPGTSDEHIAIAEELRWANPIDGAIIVTTP 180
Query: 199 DITSLRDADRVTGLLECDGIRDIKMVVNRVRTDMIKGEDMMSVLD------IQEMLGLAL 252
+ D + + + + +V N + ++ + E L L
Sbjct: 181 QQVATADVRKEINFCKKVNFQILGIVENMSGFICPHCSECTNIFSSGGGKALSEQLNLTY 240
Query: 253 LGVIPEDSEVIR 264
LG +P D + +
Sbjct: 241 LGNVPIDPQFVE 252
>sp|B0UDK8|BCHL_METS4 Light-independent protochlorophyllide reductase iron-sulfur
ATP-binding protein OS=Methylobacterium sp. (strain
4-46) GN=bchL PE=3 SV=1
Length = 301
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 123/301 (40%), Gaps = 35/301 (11%)
Query: 34 QSVLQWNRKPELAGETPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRN 93
+ LQ P+L +T +V + GKGG+GK+TT++N+ ++ ++LG V+ I D
Sbjct: 19 EGSLQVALDPDLRIDTAKVFAVY-GKGGIGKSTTSSNLSVAFSKLGKRVLQIGCDP---K 74
Query: 94 LDLLLGLENRVNYTVVEVLNG-DCRLDQALVRDKRWSNFE-LLCISKPRSKLPLGFGGKA 151
D L R+ TV++ L ++ V D + ++C+ G GG
Sbjct: 75 HDSTFTLTKRLAPTVIDALEAVKFHAEELRVEDFVVEGYNGVMCVEAGGPPAGTGCGGYV 134
Query: 152 LTWVVEALKSRQ-EGSPDFILIDCPAG-IDAGFITAITPANEAVLVTTPDITSLRDADRV 209
+ V+ LK D ++ D + GF + + A+ A++VT D S+ +R+
Sbjct: 135 VGQTVKLLKEHHLLEETDVVVFDVLGDVVCGGFASPLQHADRALIVTANDFDSIFAMNRI 194
Query: 210 TGLLECD----GIRDIKMVVNR-VRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIR 264
+ G+R ++ NR TD I +GL L + V R
Sbjct: 195 VAAIHAKAKNYGVRLGGVIANRSAATDEID--------RFNAAVGLRRLAHFQDLDVVRR 246
Query: 265 STNRGYPLV-LNKPPTLAG-----LAFEQAAWRLVEQDSMKAVMVEEEPKR-RGFFSFFG 317
S R L + P L LA +A W VE +E EP R R F F G
Sbjct: 247 SRLRKATLFEMESSPELDAVLAEYLALAEALWAGVEP-------LEAEPMRDRDLFEFLG 299
Query: 318 L 318
Sbjct: 300 F 300
>sp|P0CO88|NBP35_CRYNJ Cytosolic Fe-S cluster assembly factor NBP35 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=NBP35 PE=3 SV=1
Length = 336
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 37/266 (13%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAI-DADVGLRNLDLLLGLENRVNYTVV 109
R +++ SGKGGVGK+T TA + +LA I D D+ ++ LL+GLE+ +T
Sbjct: 81 RKILVLSGKGGVGKSTFTAGLSWALAADEECQAGIMDIDICGPSIPLLMGLESSTIHTSA 140
Query: 110 EVLNGDCRLDQALVRDKRWSNFELLCIS---KPRSKLPLGFGGKALTWVVEALKSRQEGS 166
+ LD N ++ I S + G K + + LK + G
Sbjct: 141 SGWSPAYALD----------NLAVMSIGFLLPSSSDAVIWRGPKKNGLIKQFLKDVEWGD 190
Query: 167 PDFILIDCPAGIDAGFITAITPANE-----AVLVTTPDITSLRDADRVTGLLECDGIRDI 221
D++++D P G ++ + E AVLVTTP +L+D + + GI +
Sbjct: 191 LDYMVVDTPPGTSDEHLSIVQYLKEAGIDGAVLVTTPQEVALQDVRKEIDFCKKVGIPIL 250
Query: 222 KMVVN-------------RVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNR 268
+V N ++ G + M + LG+ LLG +P D + + ++
Sbjct: 251 GLVENMSGFVCPNCKNESQIFAPTTGGAEAMG-----KELGIELLGKVPLDPRIGMTCDQ 305
Query: 269 GYPLVLNKPPTLAGLAFEQAAWRLVE 294
G + P + A +A+ R+ E
Sbjct: 306 GMSFLDEYPESPATMAYLDIVQRIRE 331
>sp|P0CO89|NBP35_CRYNB Cytosolic Fe-S cluster assembly factor NBP35 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=NBP35 PE=3 SV=1
Length = 336
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 37/266 (13%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAI-DADVGLRNLDLLLGLENRVNYTVV 109
R +++ SGKGGVGK+T TA + +LA I D D+ ++ LL+GLE+ +T
Sbjct: 81 RKILVLSGKGGVGKSTFTAGLSWALAADEECQAGIMDIDICGPSIPLLMGLESSTIHTSA 140
Query: 110 EVLNGDCRLDQALVRDKRWSNFELLCIS---KPRSKLPLGFGGKALTWVVEALKSRQEGS 166
+ LD N ++ I S + G K + + LK + G
Sbjct: 141 SGWSPAYALD----------NLAVMSIGFLLPSSSDAVIWRGPKKNGLIKQFLKDVEWGD 190
Query: 167 PDFILIDCPAGIDAGFITAITPANE-----AVLVTTPDITSLRDADRVTGLLECDGIRDI 221
D++++D P G ++ + E AVLVTTP +L+D + + GI +
Sbjct: 191 LDYMVVDTPPGTSDEHLSIVQYLKEAGIDGAVLVTTPQEVALQDVRKEIDFCKKVGIPIL 250
Query: 222 KMVVN-------------RVRTDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNR 268
+V N ++ G + M + LG+ LLG +P D + + ++
Sbjct: 251 GLVENMSGFVCPNCKNESQIFAPTTGGAEAMG-----KELGIELLGKVPLDPRIGMTCDQ 305
Query: 269 GYPLVLNKPPTLAGLAFEQAAWRLVE 294
G + P + A +A+ R+ E
Sbjct: 306 GMSFLDEYPESPATMAYLDIVQRIRE 331
>sp|B4IYG8|NUBP2_DROGR Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
grimshawi GN=GH14587 PE=3 SV=1
Length = 264
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 20/186 (10%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
V+V+ SGKGGVGK+T + + L+L G V +D D+ ++ LLGLE R +
Sbjct: 7 NVIVVLSGKGGVGKSTVSTQLALALRATGHKVGLLDIDLCGPSVPYLLGLEGRDIF---- 62
Query: 111 VLNGDCRLDQALV-----RDKRWSNFELLCISKPRSKLPLGFGGKALTWVVEALKSRQEG 165
+ D V K + + + K R+ + G K + + L +
Sbjct: 63 ------QCDDGWVPIYTDESKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIKQFLSDVKWD 116
Query: 166 SPDFILIDCPAGIDAGFITAI-----TPANEAVLVTTPDITSLRDADRVTGLLECDGIRD 220
D+++ID P G IT + P N A++VTTP +L D + + GI+
Sbjct: 117 ELDYLIIDTPPGTSDEHITVMECLREVPCNGAIIVTTPQGVALDDVRKEITFCKKTGIKL 176
Query: 221 IKMVVN 226
+ +V N
Sbjct: 177 LGIVEN 182
>sp|O66946|MRP_AQUAE Protein mrp homolog OS=Aquifex aeolicus (strain VF5) GN=mrp PE=3
SV=1
Length = 364
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 31/236 (13%)
Query: 66 TTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLDQALVRD 125
T AN+ ++L++LG+ V +DADV ++ L GL+ TV + Q ++
Sbjct: 128 TVAANLAVALSQLGYKVGLLDADVYGPSVPTLFGLKGE-RVTVDQF--------QRIIPV 178
Query: 126 KRWSNFELLCIS--KPRSKLPLGFGG----KALTWVVEALKSRQEGSPDFILIDCPAGID 179
+++ ++L I P P+ + G KALT E L S + G+ DF+++D P G
Sbjct: 179 EKYG-LKILSIGFMLPSEDTPIIWRGPMLMKALT---EFLFSTKWGNLDFLVMDLPPGTG 234
Query: 180 AGFITAITPA--NEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMVVNRV--------R 229
IT AV+VTTP +L D + + I + ++ N +
Sbjct: 235 DVQITLAQNVELTGAVVVTTPQDVALADVKKAVSMFREVNIPVLGVIENMAYFICPSDKQ 294
Query: 230 TDMIKGEDMMSVLDIQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAF 285
I G+ V + GL +LG IP D EV +++G P+V++ P + AF
Sbjct: 295 KYYIFGKG--KVAEFANAYGLKILGSIPIDPEVAEKSDKGEPIVISHPDSEVAKAF 348
>sp|B4LGB4|NUBP2_DROVI Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
virilis GN=GJ11530 PE=3 SV=1
Length = 266
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 16/184 (8%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
V+V+ SGKGGVGK+T + + L+L G V +D D+ ++ LLGLE Y
Sbjct: 7 NVIVVLSGKGGVGKSTVSTQLALALRATGHKVGLLDIDLCGPSVPYLLGLEGSDIY---- 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCIS---KPRSKLPLGFGGKALTWVVEALKSRQEGSP 167
C + ++ I K R+ + G K + + L +
Sbjct: 63 ----QCEDGWVPIYTDESKTLAVMSIGFLLKNRNDPVIWRGPKKTMMIRQFLTDVKWEDM 118
Query: 168 DFILIDCPAGIDAGFITAI-----TPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIK 222
D+++ID P G IT + P N A++VTTP +L D + + GI+ +
Sbjct: 119 DYLIIDTPPGTSDEHITVMECMREVPCNGAIIVTTPQGVALDDVRKEITFCKKTGIKLLG 178
Query: 223 MVVN 226
+V N
Sbjct: 179 IVEN 182
>sp|B4QJ46|NUBP2_DROSI Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
simulans GN=GD14899 PE=3 SV=1
Length = 260
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 16/184 (8%)
Query: 51 RVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 110
V+V+ SGKGGVGK+T + + L+L + GF V +D D+ ++ LLGLE R +
Sbjct: 7 NVIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDIF---- 62
Query: 111 VLNGDCRLDQALVRDKRWSNFELLCIS---KPRSKLPLGFGGKALTWVVEALKSRQEGSP 167
C V + ++ I K R + G K + + L +
Sbjct: 63 ----QCDEGWVPVYTDEFQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDEL 118
Query: 168 DFILIDCPAGIDAGFITAITPANE-----AVLVTTPDITSLRDADRVTGLLECDGIRDIK 222
D+++ID P G IT + E A++VTTP +L D + + GI +
Sbjct: 119 DYLIIDTPPGTSDEHITVMECLKEVGCHGAIIVTTPQEVALDDVRKEITFCKKTGINILG 178
Query: 223 MVVN 226
+V N
Sbjct: 179 IVEN 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,615,977
Number of Sequences: 539616
Number of extensions: 5234415
Number of successful extensions: 17993
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 17297
Number of HSP's gapped (non-prelim): 622
length of query: 340
length of database: 191,569,459
effective HSP length: 118
effective length of query: 222
effective length of database: 127,894,771
effective search space: 28392639162
effective search space used: 28392639162
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)