BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047627
(422 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255544718|ref|XP_002513420.1| conserved hypothetical protein [Ricinus communis]
gi|223547328|gb|EEF48823.1| conserved hypothetical protein [Ricinus communis]
Length = 483
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 244/471 (51%), Gaps = 66/471 (14%)
Query: 2 ETSRTHPVSETQLNNLSLSFENLQ-VNDPSYSS--------FN----------------- 35
ET +++ ++ +++LS S ENL +N YSS FN
Sbjct: 13 ETPKSNLFVDSAIDSLSFSVENLSLINGDGYSSIGSNNSLAFNGEFSASRTQETTPDIQE 72
Query: 36 ---EIHPSPPV-PLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQT-------P 84
E+ +P + PLYP WAV STV +G + NFQ+ P
Sbjct: 73 TGLEMSRTPVLTPLYPDGIWAV----NYSTVN--AGIHLSSFHGYHDMNFQSNNYDGASP 126
Query: 85 LGFQANPFQHCANS-----------GILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVS 133
Q + C S ++ A +QGS++LQ+ L +S F K+ V+
Sbjct: 127 SAIQESNENSCMVSQDFIPSMQNQESFIMFASTQQGSKHLQDLLAYSNSDFASKLLETVT 186
Query: 134 EFTFQI------ICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSS 187
+I + +QY V K I++CN+ QL I +IT D+ FVQ + GS
Sbjct: 187 ASVVEIPVINYLMVDQYGCHVCSKLIDSCNDKQLALILERITRNDEQFVQICCNINGSKM 246
Query: 188 IRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAA 247
I+KL+K V R L+ + +L + F L + + GS VV+ C++ + ++ +Y+AA
Sbjct: 247 IKKLIKKV-KRSCLICYMTVSLYKGFCQLAINQIGSYVVVFCMDCL--DVKQSALLYEAA 303
Query: 248 LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELE 307
+ HCL LA GC+++NNFID ++G R+ +L LIS NA LS++ SGN+VVQ VLELE
Sbjct: 304 ISHCLILATDATGCVSINNFIDRIQGSHRQTLLELISDNAVFLSQDPSGNHVVQKVLELE 363
Query: 308 DPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLL-NSDQIFRVACD 366
+P + I L+GHY LS K GS VV+ CL + V Y+V++ L S Q+ ++A D
Sbjct: 364 NPIINAKIGAQLKGHYARLSFQKWGSHVVEKCLVSQPIV-YVVQDLLTCGSSQLSQIARD 422
Query: 367 KYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIKD 417
++GNYVIQ AL T + N + LH L+ L+ NL++L+ GYGK VY I D
Sbjct: 423 QFGNYVIQKALKVTKKKN-ITLHLILLNSLKPNLNALQNGYGKKVYRLIMD 472
>gi|255553119|ref|XP_002517602.1| RNA binding protein, putative [Ricinus communis]
gi|223543234|gb|EEF44766.1| RNA binding protein, putative [Ricinus communis]
Length = 471
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 241/461 (52%), Gaps = 53/461 (11%)
Query: 2 ETSRTHPVSETQLNNLSLSFENLQV----------NDPSYSSFNEIHPS----------P 41
ET +++ ++ ++ LS S ENL + + S S E P+
Sbjct: 12 ETPKSNLSVDSAIDILSFSVENLSLINGDCSLPFNGEFSASRTQETTPAIQETGLEMSRT 71
Query: 42 PV--PLYPQSTWAVPSLSGRSTVP---------------NLSGTSNPQYETITSSNFQTP 84
PV PLYP S WAV + + +P + G S E S+
Sbjct: 72 PVLTPLYPDSIWAVNYSTVNAGMPLGSFHGYNGMNFQSNSYGGASTSAVEERNESS--CT 129
Query: 85 LGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDS-----RFLDKVFNVVSEFTF-- 137
+G + P +S ++ A +QGS+YLQ+ L + DS + LDKV V
Sbjct: 130 VGQDSIPGMQNQDS-FIMFASTQQGSEYLQDLLATSDSYLTTSKILDKVTASVVGIPVIN 188
Query: 138 QIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVAN 197
++ +Q+ V K I++CN+ QL I +IT + FV+ GS I+KL+K V
Sbjct: 189 YLMVDQHGYHVCSKLIDSCNDIQLTLILERITKNTEQFVRICCAINGSKMIKKLIKKV-K 247
Query: 198 RPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACH 257
R L+ + +L + F L + + GS VV+ C++ + +N +Y+AA+ HCL LA
Sbjct: 248 RSCLISYLTVSLYKGFYQLAINQIGSYVVVFCMDCL--DIQQNALLYEAAISHCLILATD 305
Query: 258 EQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICF 317
GC++ N FID ++G RR+ +L LIS NA LS++ SGN+VVQ VL LE+P + I
Sbjct: 306 AIGCVSANKFIDRIQGSRRQTLLELISDNAVFLSQDPSGNHVVQKVLGLENPIINAKIGA 365
Query: 318 SLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLL-NSDQIFRVACDKYGNYVIQTA 376
L+GHY+ LS K GS VV+ CL + V Y V++ L S Q+ ++A D++GNYVIQ A
Sbjct: 366 QLKGHYVRLSFQKWGSHVVEKCLVSQAMV-YAVQDLLTCGSSQLLQIARDQFGNYVIQKA 424
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIKD 417
L T + N + LH+ L+ L+ NL++LR G+GK VY+ I D
Sbjct: 425 LKVTKKKN-IALHRILLNSLEPNLNALRNGFGKKVYSLIMD 464
>gi|224117628|ref|XP_002317626.1| predicted protein [Populus trichocarpa]
gi|222860691|gb|EEE98238.1| predicted protein [Populus trichocarpa]
Length = 502
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 213/408 (52%), Gaps = 39/408 (9%)
Query: 41 PPVPLYPQSTWAVPSLS-------------GRSTVPNLSGTSNPQYETITSSNFQTPLGF 87
PP+ L+ +S W SLS RS VPN + S + T G
Sbjct: 93 PPL-LFSESVWGSNSLSNGGSFQGSILQPRARSLVPNFNFLSGSALDLGTGRAGSGLGGV 151
Query: 88 QANPFQH-------------CANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSE 134
+ Q+ I+ D+ GS+ +Q L + +++N V
Sbjct: 152 DNSMVQNQEELKKVRIFLGLLQGDSIVNYCSDQHGSRTIQGLLRLRNPEITREIYNKVLA 211
Query: 135 FT-------FQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSS 187
+ +++ +Q+ VFG+ I+ N QL IT +IT FV ++D GS+S
Sbjct: 212 LSSRGIAVVLELMLDQHGWHVFGELIDALNYQQLKLITYEITKNLDNFVSLTLDTHGSNS 271
Query: 188 IRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAA 247
IRK+++ + R PL+ LVM L+ F +M + GS V +C Q+ +N+ +Y+AA
Sbjct: 272 IRKVIRLL-RRSPLVTLVMNNLRAAFFTIMTNRIGSYAVSECFNQLSAEDNR--LLYEAA 328
Query: 248 LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELE 307
+E CL LA +G + + I+ ++G +R ++L ++S A LS++ GNYVVQ V+ L
Sbjct: 329 IECCLDLAIDHEGSLALIRVINTIQGLQRYRLLDILSTYVAFLSQDPKGNYVVQKVISLN 388
Query: 308 DPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDK 367
+P + IC LRG+Y +SL K GS + + CL ++++E+FL N++ + +VA D+
Sbjct: 389 NPLFTQKICHHLRGYYGTISLQKGGSHIAEKCLDTEWK-SWVIEDFLSNTNTLLQVAKDE 447
Query: 368 YGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFI 415
+GNYVIQ AL T + S L+Q+L+ +LQ +L L+ GYG++V+N I
Sbjct: 448 FGNYVIQKALKVTKKSGS-PLYQKLLLRLQPHLSILQSGYGRNVFNLI 494
>gi|224056741|ref|XP_002299000.1| predicted protein [Populus trichocarpa]
gi|222846258|gb|EEE83805.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 139/443 (31%), Positives = 223/443 (50%), Gaps = 54/443 (12%)
Query: 9 VSETQLNNLSLSFENLQVNDPSY-SSFNEIHPSPPVPLYPQSTWAVPSLS---------- 57
+ ET++N L P Y + F + PP PL+P + W S+
Sbjct: 64 IQETRINGL-----------PQYQAGFAKSTLVPP-PLFPGTIWGSNSMGDGWDFQGSRL 111
Query: 58 ---GRSTVPNL----SGTSNPQYETITSSNFQ----TPLGFQANPFQHCANSGILLLAQ- 105
+S VPNL SG+ + +I SN + + Q P + N LL
Sbjct: 112 QSGAKSFVPNLNYSPSGSVVDEGASIVGSNTGLSDYSVVKNQEKP-NNVRNFICLLQGDR 170
Query: 106 ------DEQGSQYLQEKLTSGDS----RFLDKVFNVVSE---FTFQIICNQYARFVFGKF 152
D+ GS+ L L+ D + KV ++ S F+++ NQ+ VF +
Sbjct: 171 FVNYCLDKDGSRTLHGLLSLRDPEITCQICKKVLDLSSRGIPIFFELMLNQHGWQVFSEL 230
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL 212
I++ N QL IT IT +F+ + GS+ I+K+++ + R L+ V L
Sbjct: 231 IDSLNHQQLKLITYVITKDLSIFIALTFHTHGSNLIKKVIR-ILRRSHLISFVTNNLCAA 289
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
F L+M + GS VV +CL + +NK +Y+AA+ CL LA +G I + I+ ++
Sbjct: 290 FLLIMTNRIGSYVVSECLNHLRAEDNKA--LYEAAITWCLDLAIDHEGSIALIRVINTIQ 347
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
G +R ++L ++S NA LS++ GNYV+Q V+ L +P + +C L GHY +SL K G
Sbjct: 348 GLQRYRLLNILSRNAVFLSQDPEGNYVIQKVISLNNPLFTQNVCHLLIGHYETISLQKGG 407
Query: 333 SFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
S +V+ CL +I+E FL N++ + VA D +GNYVIQ AL T + S L+ +L
Sbjct: 408 SHIVEKCLDTEWK-GWIIENFLSNTNTLLHVAKDAFGNYVIQKALKVTKKSGS-PLYHKL 465
Query: 393 VTKLQQNLDSLRFGYGKHVYNFI 415
+++L+ +L L+ GYG++V+N I
Sbjct: 466 LSRLKPHLSILQSGYGRNVFNLI 488
>gi|147798084|emb|CAN67257.1| hypothetical protein VITISV_039435 [Vitis vinifera]
Length = 507
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 178/309 (57%), Gaps = 12/309 (3%)
Query: 110 SQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQIT 169
S ++K S + F + ++V+ CN VF + E C+ +QL +I ++
Sbjct: 206 SALAEKKPESKSTIFEGLIAHIVTLAVHPSGCN-----VFIRLTEACDANQLSQILSKLI 260
Query: 170 SQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQC 229
++ S D GS SI++L++ V R PL+ V+ AL F LM + G+ V+ +C
Sbjct: 261 LPPSTIIRVSHDPIGSKSIQRLIQ-VLRRSPLVVPVVTALAAGFYELMKDQQGAMVISRC 319
Query: 230 LEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAAS 289
L + + +N+ +Y+AA+ C+ LA H +GCI +N+FI+ + GP R +L+ I+ N
Sbjct: 320 LALL--SSEQNEELYRAAILPCVALATHAKGCIALNSFINNVIGPYRDLLLHKITDNTVF 377
Query: 290 LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYI 349
LS++ GN+VVQH+LEL P IC L+G+Y+ LS+ K GS +V+ CLK +++
Sbjct: 378 LSQDPRGNFVVQHILELHHPVFTSKICHLLQGYYVRLSVQKSGSHIVEKCLKSHW-MSFA 436
Query: 350 VEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFG-YG 408
V+E L S ++ ++A D++GNYVIQTAL T N + L++ L+ L+ L SL +G
Sbjct: 437 VKE-LTTSGRLPQLAHDQFGNYVIQTALRVTKDAN-IQLYRSLLEALEPYLPSLASHLHG 494
Query: 409 KHVYNFIKD 417
K+++ I +
Sbjct: 495 KNLFRLINN 503
>gi|22327888|ref|NP_200462.2| pumilio 12 [Arabidopsis thaliana]
gi|313471423|sp|Q9LVC3.2|PUM12_ARATH RecName: Full=Pumilio homolog 12; Short=APUM-12; Short=AtPUM12
gi|332009392|gb|AED96775.1| pumilio 12 [Arabidopsis thaliana]
Length = 596
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 179/319 (56%), Gaps = 11/319 (3%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I LA+D+ G ++LQ + D ++ +FN + ++ +++ + + ++ K +E
Sbjct: 278 ARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKLLEV 337
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
CNEDQ ++I IT + L ++ S D G+ +++K+++ A R + +++ ALK
Sbjct: 338 CNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVE-TAKREEEISIIISALKHGIVH 396
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ VV +CL+ + + K F+++AA+ HC+ LA GC + + +G +
Sbjct: 397 LIKNVNGNHVVQRCLQYLLPYCGK--FLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQ 454
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++ ++ I+ NA LS++ GNYV+Q+V EL+ + I L G+Y +LS+ KC S V
Sbjct: 455 KQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNV 514
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
V+ CLK + I+ E L+N ++ +V D YGNYVIQ AL + + ++H LV
Sbjct: 515 VEKCLKLADDKHRARIIRE-LINYGRLDQVMLDPYGNYVIQAAL----KQSKGNVHALLV 569
Query: 394 TKLQQNLDSLRFG-YGKHV 411
++ N+ SLR YGK V
Sbjct: 570 DAIKLNISSLRTNPYGKKV 588
>gi|297793151|ref|XP_002864460.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
gi|297310295|gb|EFH40719.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
Length = 598
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 178/319 (55%), Gaps = 11/319 (3%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I LA+D+ G ++LQ D ++ +F+ + ++ +++ + + ++ K +E
Sbjct: 280 ARGKIYYLAKDQHGCRFLQRIFAEKDGNDIEMIFDEIIDYISELMIDPFGNYLVQKLLEV 339
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
CNEDQ ++I IT + L ++ S D G+ +++K+++ A R + +++ ALK
Sbjct: 340 CNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVE-TAKREEEISIIISALKHGIVN 398
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ VV +CL+ + H K F+++AA+ HC+ LA GC + + +G +
Sbjct: 399 LIKNVNGNHVVQRCLQYLLPHCGK--FLFEAAITHCVDLATDRHGCCVLQKCLGYSEGEQ 456
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++ ++ I+ NA LS++ GNYV+Q+V EL+ + I L G+Y +LS+ KC S V
Sbjct: 457 KQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNV 516
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
V+ CLK + I+ E L+N ++ +V D YGNYVIQ AL R + ++H LV
Sbjct: 517 VEKCLKLADDKHRARIIRE-LINYGRLDQVMLDPYGNYVIQAAL----RQSKGNVHALLV 571
Query: 394 TKLQQNLDSLRFG-YGKHV 411
++ ++ SLR YGK V
Sbjct: 572 DAIKLHISSLRTNPYGKKV 590
>gi|255564824|ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
gi|223537356|gb|EEF38985.1| RNA binding protein, putative [Ricinus communis]
Length = 771
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 178/324 (54%), Gaps = 17/324 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ L+A+D+ G ++LQ K + G + ++K+F V + +++ + + ++ K +E CNED
Sbjct: 427 VYLMAKDQHGCRFLQRKFSEGTPQDIEKIFLEVIDHIAELMTDPFGNYLVQKLLEVCNED 486
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++I IT + V+ S D G+ +++K+++ + P +V+ +LK L+
Sbjct: 487 QRMQILCAITRKAGELVRISCDMHGTRAVQKVIETLKT-PQQFSMVVSSLKPGIVTLIKN 545
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V +CL+ Y ++F+++AA +C+ LA GC + + +G +R+ +
Sbjct: 546 MNGNHVAQRCLQ--YLTPEHSEFLFEAATTNCVELATDRHGCCVLQKCLSHSEGEQRRCL 603
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA LS++ GNYVVQ V EL P+ I L G+Y DLS+ K S V++ C
Sbjct: 604 ISEITSNALILSQDPFGNYVVQFVFELRLPWATANILDQLEGNYGDLSMQKYSSNVIEKC 663
Query: 340 LKYRITVN--YIVEEFLLNS--DQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
LKY + +I+ + + N+ DQ+ + D YGNYVIQ AL ++ LH LV
Sbjct: 664 LKYASEEHRAHIIRQLISNTHLDQVMQ---DPYGNYVIQAALHQSKGA----LHAALVEA 716
Query: 396 LQQNLDSLRFG-YGKHVY--NFIK 416
++ ++ LR YGK V NF+K
Sbjct: 717 IRPHVPVLRTSPYGKKVLSSNFLK 740
>gi|255545698|ref|XP_002513909.1| conserved hypothetical protein [Ricinus communis]
gi|223546995|gb|EEF48492.1| conserved hypothetical protein [Ricinus communis]
Length = 1204
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 163/285 (57%), Gaps = 5/285 (1%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L+AQD+ G ++LQ G S+ + +FN + + +++ + +V KF++ CNE+
Sbjct: 892 IYLMAQDQNGCRWLQRIFDEGTSQDIQIIFNEIIDHVVELMLKPFGNYVIQKFLDVCNEE 951
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L+I +T + ++ ++ +G+ +++KL++ + R + +VM AL+ F L+
Sbjct: 952 QRLQIVFMVTEEPGQLLRICLNTYGTRAVQKLIETLKTRQQISFVVM-ALRPGFLDLVKD 1010
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ +CL+ + HN+ N FI+ AA + + +A H GC M I G R+++
Sbjct: 1011 QNGNHVIQRCLQCL--HNDDNKFIFDAAAKFSVQIATHRHGCCVMQRCITHSTGKHREKL 1068
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS NA L+++ GNYVVQ+++EL++P + R HY+ LS+ K S VV+ C
Sbjct: 1069 ITEISKNALLLAQDPFGNYVVQYIVELKNPSAAVNLLSQFRRHYVHLSMQKFSSHVVEKC 1128
Query: 340 LKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRP 383
LK+ + IV E L++ + ++ D + NYVIQ+AL T P
Sbjct: 1129 LKHLEESREQIVHE-LISVSRFEQLLQDPFANYVIQSALAVTKGP 1172
>gi|8809626|dbj|BAA97177.1| unnamed protein product [Arabidopsis thaliana]
Length = 604
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 179/327 (54%), Gaps = 19/327 (5%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I LA+D+ G ++LQ + D ++ +FN + ++ +++ + + ++ K +E
Sbjct: 278 ARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKLLEV 337
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
CNEDQ ++I IT + L ++ S D G+ +++K+++ A R + +++ ALK
Sbjct: 338 CNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVE-TAKREEEISIIISALKHGIVH 396
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ VV +CL+ + + K F+++AA+ HC+ LA GC + + +G +
Sbjct: 397 LIKNVNGNHVVQRCLQYLLPYCGK--FLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQ 454
Query: 276 RKQILYLISVNAASLSRN--------FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
++ ++ I+ NA LS++ F NYV+Q+V EL+ + I L G+Y +LS
Sbjct: 455 KQHLVSEIASNALLLSQDPFGIDANFFCRNYVLQYVFELQLQWATFEILEQLEGNYTELS 514
Query: 328 LTKCGSFVVQNCLKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNS 385
+ KC S VV+ CLK + I+ E L+N ++ +V D YGNYVIQ AL + +
Sbjct: 515 MQKCSSNVVEKCLKLADDKHRARIIRE-LINYGRLDQVMLDPYGNYVIQAAL----KQSK 569
Query: 386 LHLHQRLVTKLQQNLDSLRFG-YGKHV 411
++H LV ++ N+ SLR YGK V
Sbjct: 570 GNVHALLVDAIKLNISSLRTNPYGKKV 596
>gi|218186872|gb|EEC69299.1| hypothetical protein OsI_38363 [Oryza sativa Indica Group]
Length = 770
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 152/283 (53%), Gaps = 8/283 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I LLA+D+ G ++LQ T G S + KVF+ + E +++ + + ++ K +E CN D
Sbjct: 452 IHLLAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGNYLVQKLLEECNHD 511
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + I +IT + ++ S D G+ ++K+++ + N P + +V+ AL LMM
Sbjct: 512 QKMHIVYEITKRPGQLIKFSCDMHGTRVVQKVIETI-NSPDEVSMVVCALSSGAITLMMD 570
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G V L+CL++ H + F+ A+E+ LA QGC + I ++ Q+
Sbjct: 571 ANGCHVALRCLQKFSHEHKA--FLLNVAMEYYFELAQDRQGCCIIQKCILHANKEQKNQL 628
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
LY I+ A LS + GNYVVQ++L+L + + I L GH+ LS+ K S VV+ C
Sbjct: 629 LYNITSRALELSEHQYGNYVVQYILDLHISWATDEILDKLEGHFGSLSMQKSSSNVVEKC 688
Query: 340 LK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIE 379
LK + V I E L+N ++ + D YGNYVIQTAL E
Sbjct: 689 LKEASWPKRVKIIHE--LINDPKLLHILIDPYGNYVIQTALKE 729
>gi|168003728|ref|XP_001754564.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694185|gb|EDQ80534.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 361
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 179/315 (56%), Gaps = 12/315 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L+A+D+ G ++LQ+K G + K+F+ + +++ + + ++ K +E C+E
Sbjct: 48 IYLIAKDQHGCRFLQKKFDEGGHEDVQKIFHEIIGHITELMKDPFGNYLVQKLLEVCDES 107
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + I L++ + D V+ S++ G+ +++KL++ + + P + +V+ AL L+
Sbjct: 108 QRMEI-LRVVTMDGELVKISLNMHGTRAVQKLIETLKS-PEQVTMVITALTEGVVELIKD 165
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL+++ H +++ FI+ AA HC+ +A H GC M +D P+++++
Sbjct: 166 LNGNHVVQRCLQKLCHEDSQ--FIFDAAAAHCVEIATHRHGCCVMQRCVDFASAPQKQRL 223
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ +I+ NA +LS++ GNYVVQ++L+L+ + + L G Y L++ K S VV+ C
Sbjct: 224 VAVIAANALALSQDPYGNYVVQYILDLKQGWATSEVMVRLEGSYAFLAMQKFSSNVVEKC 283
Query: 340 LKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
LK + N +V E L S ++ ++ D+Y NYVIQ+AL P LH LV ++
Sbjct: 284 LKLGMEENRGRLVRE-LTASSRLGQLLQDQYANYVIQSALSVCKGP----LHAGLVDAIR 338
Query: 398 QNLDSLRFG-YGKHV 411
L +LR YGK +
Sbjct: 339 PYLPALRNSPYGKRI 353
>gi|168015525|ref|XP_001760301.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688681|gb|EDQ75057.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 347
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 178/315 (56%), Gaps = 12/315 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L+A+D+ G ++LQ+K G + K+F + +++ + + ++ K +E C+E
Sbjct: 34 IYLIAKDQHGCRFLQKKFDEGGPEDVQKIFYEIIGHITELMKDPFGNYLVQKLLEVCDES 93
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + I L++ + D V+ S++ G+ +++KL++ + + P + +V+ AL L+
Sbjct: 94 QRMEI-LRVVTTDGELVKISLNMHGTRAVQKLIETLKS-PDQVTMVITALTEGVVELIKD 151
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL+++ H +++ FI+ AA HC+ +A H GC M +D P+++++
Sbjct: 152 LNGNHVVQRCLQKLSHEDSQ--FIFDAAAAHCVEIATHRHGCCVMQRCVDFASAPQKQRL 209
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ +I+ NA +LS++ GNYVVQ++L+L+ + + L G Y L++ K S VV+ C
Sbjct: 210 VAVIAANALTLSQDPYGNYVVQYILDLKQGWATSEVMLRLEGSYAFLAMQKFSSNVVEKC 269
Query: 340 LKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
LK + + +V E L S ++ ++ D+Y NYVIQ+AL P LH LV ++
Sbjct: 270 LKLGVEEHRGRLVRE-LTASSRLGQLLQDQYANYVIQSALSVCKGP----LHAGLVDAIR 324
Query: 398 QNLDSLRFG-YGKHV 411
L +LR YGK +
Sbjct: 325 PYLPALRNSPYGKRI 339
>gi|115488610|ref|NP_001066792.1| Os12g0488900 [Oryza sativa Japonica Group]
gi|108862690|gb|ABA98278.2| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649299|dbj|BAF29811.1| Os12g0488900 [Oryza sativa Japonica Group]
gi|215697156|dbj|BAG91150.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617094|gb|EEE53226.1| hypothetical protein OsJ_36125 [Oryza sativa Japonica Group]
Length = 769
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 151/283 (53%), Gaps = 8/283 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I LLA+D+ G ++LQ T G S + KVF+ + E +++ + + ++ K +E CN D
Sbjct: 451 IHLLAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGNYLVQKLLEECNHD 510
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + I +IT + ++ S D G+ ++K+++ + N P + +V+ AL LMM
Sbjct: 511 QKMHIVYEITKRPGQLIKFSCDMHGTRVVQKVIETI-NSPDEVSMVVCALSSGAITLMMD 569
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G V L+CL++ H + F+ A+E+ LA QGC + I ++ Q+
Sbjct: 570 ANGCHVALRCLQKFSHEHKA--FLLNVAMEYYFELAQDRQGCCIIQKCILHANKEQKNQL 627
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
LY I+ A LS + GNYVVQ++L+L + + I L H+ LS+ K S VV+ C
Sbjct: 628 LYNITSRALELSEHQYGNYVVQYILDLHISWATDEILDKLEDHFGSLSMQKSSSNVVEKC 687
Query: 340 LK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIE 379
LK + V I E L+N ++ + D YGNYVIQTAL E
Sbjct: 688 LKEASWPKRVKIIHE--LINDPKLLHILIDPYGNYVIQTALKE 728
>gi|224052863|ref|XP_002297618.1| predicted protein [Populus trichocarpa]
gi|222844876|gb|EEE82423.1| predicted protein [Populus trichocarpa]
Length = 620
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 174/322 (54%), Gaps = 18/322 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L+A+D+ G ++LQ + G + ++K+F + + +++ + + ++ K +E CNED
Sbjct: 299 IYLMAKDQHGCRFLQRTFSEGTPQDVEKIFLEIIDHIVELMTDPFGNYLVQKLLEVCNED 358
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++I IT + V+ S D G+ +++K+++ + P +V+ ALK L+
Sbjct: 359 QRMQILRTITRKAGELVRISCDMHGTRAVQKVIETLKT-PEQFSMVVSALKPCIVTLIKN 417
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V +CL+ Y ++F+++A +C+ LA GC + + + KG +R+ +
Sbjct: 418 MNGNHVAQRCLQ--YLMPEYSEFLFEATTANCVELATDRHGCCVLQKCLSQSKGEQRRCL 475
Query: 280 LYLISVNAASLSRNFSG-------NYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+ I+ NA LS++ G NYVVQ V EL P+ I L G+Y DLS+ K
Sbjct: 476 VSEITSNALILSQDPFGYCIFLFSNYVVQFVFELRLPWAATDILDQLEGNYGDLSVQKYS 535
Query: 333 SFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
S VV+ CLKY + I+ E L+N+ ++ +V D +GNYVIQ AL ++ LH
Sbjct: 536 SNVVEKCLKYAGEVRRTRIIRE-LINNSRLDQVMQDPFGNYVIQAALQQSKGA----LHA 590
Query: 391 RLVTKLQQNLDSLRFG-YGKHV 411
LV ++ ++ +L+ YGK V
Sbjct: 591 ALVEAIRPHVPTLQTSPYGKKV 612
>gi|356557551|ref|XP_003547079.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 770
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 166/300 (55%), Gaps = 10/300 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L+A+D+ G ++LQ G + +FN + + +++ N + ++ K ++ C+E+
Sbjct: 456 IYLIAKDQHGCRFLQRIFDEGTPEDVQVIFNEIIDHVVELMMNPFGNYLMQKLLDVCDEN 515
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +++ L +T + V+ S++ G+ ++K+++ + R + LV+ AL+ F L+
Sbjct: 516 QRMQMILMVTEEPGQLVRISLNTHGTRVVQKVIETLKTRQQI-SLVVAALEPGFLALIKD 574
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV CL+ + + +NK FI+ AA ++C+ +A H+ GC + I +G R+++
Sbjct: 575 LNGNHVVQHCLQCLSNEDNK--FIFVAAAKYCVDIATHQHGCCVLQRCIGHSRGEHREKL 632
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS NA L+++ GNYVVQ +L+L P T+ G Y+ LS+ K GS VV+ C
Sbjct: 633 VEEISANALLLAQDQFGNYVVQFILDLRIPSATATLSLQFEGKYVHLSMQKFGSHVVEKC 692
Query: 340 LKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L N ++ E LL++ ++ D + NYVIQ+A+ R + H+H LV ++
Sbjct: 693 LAVFNDENRSRVIHE-LLSAPHFEQLLQDPHANYVIQSAV----RHSEGHVHNLLVEAIE 747
>gi|147861285|emb|CAN81897.1| hypothetical protein VITISV_009053 [Vitis vinifera]
Length = 815
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 173/325 (53%), Gaps = 14/325 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L+A+D+ G ++LQ K+T G++ ++K+F + +++ + + ++ K +E C+ED
Sbjct: 501 IYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQKLLEVCSED 560
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I IT++ + S++ G+ S++K+++ + + P +V+ +LK L+
Sbjct: 561 QRTQIVFAITAKAGDLLTVSINMHGTRSVQKVIETIKS-PEQFLMVVASLKPGIVNLIKD 619
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G V CL+ + +F+++A HC+ LA GC + + G R ++
Sbjct: 620 LNGYHVAECCLQHLM--PGYIEFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLRL 677
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I NA LS++ GNYVVQ+V ELE + + L G+Y LS+ K S VV+ C
Sbjct: 678 LSAIIANALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSSNVVEKC 737
Query: 340 LKYRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
LKY + I++EF ++ Q+ ++ D Y NYVIQTAL + LH L+ ++
Sbjct: 738 LKYAGEERFARIIQEF-MDHPQLDQMMLDPYANYVIQTALNHSKGA----LHAALLEAIR 792
Query: 398 QNLDSLRFG-YGKHVYNFIKDCDLQ 421
++ +LR YGK V + C L+
Sbjct: 793 PHIPALRTNPYGKKV---LSSCGLK 814
>gi|356528751|ref|XP_003532961.1| PREDICTED: uncharacterized protein LOC100780898 [Glycine max]
Length = 763
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 165/304 (54%), Gaps = 10/304 (3%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I L+A+D+ G ++LQ G + +FN + + +++ N + ++ K ++
Sbjct: 445 ARGLIYLIAKDQHGCRFLQRIFDEGTPEDVQVIFNEIIDHVAELMMNPFGNYLMQKLLDV 504
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
C+E Q ++I L +T + V+ S++ G+ ++KL++ + R + LV+ AL+ F
Sbjct: 505 CDEKQRMQIILMVTEEPGQLVRISLNIHGTRVVQKLIETLKTRQQI-SLVVAALEPGFLA 563
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ VV CL+ + + +NK FI+ AA ++C+ +A H+ GC + I +G
Sbjct: 564 LIKDLNGNHVVQHCLQCLSNEDNK--FIFVAAAKYCVDIATHQHGCCVLQRCIGHSRGEH 621
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
R++++ IS NA L+++ GNYVVQ +L+L P T+ Y+ LS+ K GS V
Sbjct: 622 REKLVEEISANALLLAQDQFGNYVVQFILDLRIPSATATLSLQFERKYVHLSMQKFGSHV 681
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
V+ CL N ++ E LL++ ++ D + NYVIQ+AL R + H+H LV
Sbjct: 682 VEKCLAVFNDENQSRVIHE-LLSAPHFEQLLQDPHANYVIQSAL----RHSEGHVHNLLV 736
Query: 394 TKLQ 397
++
Sbjct: 737 EAIE 740
>gi|225441625|ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250413 [Vitis vinifera]
Length = 815
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 173/325 (53%), Gaps = 14/325 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L+A+D+ G ++LQ K+T G++ ++K+F + +++ + + ++ K +E C+ED
Sbjct: 501 IYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQKLLEVCSED 560
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I IT++ + S++ G+ S++K+++ + + P +V+ +LK L+
Sbjct: 561 QRTQIVFAITAKAGDLLTVSINMHGTRSVQKVIETIKS-PEQFLMVVASLKPGIVNLIKD 619
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G V CL+ + +F+++A HC+ LA GC + + G R ++
Sbjct: 620 LNGYHVAECCLQHLM--PGYIEFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLRL 677
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I NA LS++ GNYVVQ+V ELE + + L G+Y LS+ K S VV+ C
Sbjct: 678 LSAIIANALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSSNVVEKC 737
Query: 340 LKYRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
LKY + I++EF ++ Q+ ++ D Y NYVIQTAL + LH L+ ++
Sbjct: 738 LKYAGEERFARIIQEF-MDHPQLDQMMLDPYANYVIQTALNHSKGA----LHAALLEAIR 792
Query: 398 QNLDSLRFG-YGKHVYNFIKDCDLQ 421
++ +LR YGK V + C L+
Sbjct: 793 PHIPALRTNPYGKKV---LSSCGLK 814
>gi|302775508|ref|XP_002971171.1| hypothetical protein SELMODRAFT_94948 [Selaginella moellendorffii]
gi|300161153|gb|EFJ27769.1| hypothetical protein SELMODRAFT_94948 [Selaginella moellendorffii]
Length = 321
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 173/312 (55%), Gaps = 13/312 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A+D+ G ++LQ + G + L K+F + + ++ + + ++ K +E C EDQ L
Sbjct: 11 IAKDQYGCRFLQRRFDEGVAEDLQKIFEEIIDHIVDLMTDPFGNYLVQKLLEVCTEDQRL 70
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
I + S D+L + S++ G+ +++KL++ + + P + ++ +L++ +L+ G
Sbjct: 71 EILRVVCSGDEL-ISISLNMHGTRAVQKLIETLKS-PEQVSMITSSLEQGIVILIKDLNG 128
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV +CL+++ N +N FI+ AA +HC+ + H GC + +D KG ++++++
Sbjct: 129 NHVVQRCLQRL--GNEENQFIFDAAAQHCVEVGTHRHGCCVLQRCVDFSKGVQKERLVGE 186
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ NA LS++ GNYVVQ++L+ E P++ + L GH+ L++ K S VV+ CLK
Sbjct: 187 IAANALVLSQDQYGNYVVQYILD-EAPWIAPEVMAQLEGHHAHLAMQKFSSNVVEKCLKQ 245
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNL 400
I+ E L S + ++ D + NYVIQ AL T LH LV ++ +L
Sbjct: 246 GADDKRARIIHE-LTKSAFLGQLLQDPFANYVIQCALTVTKGA----LHASLVEAIRPHL 300
Query: 401 DSLRFG-YGKHV 411
+LR YGK +
Sbjct: 301 PALRSSPYGKRI 312
>gi|297739756|emb|CBI29938.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 173/325 (53%), Gaps = 14/325 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L+A+D+ G ++LQ K+T G++ ++K+F + +++ + + ++ K +E C+ED
Sbjct: 400 IYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQKLLEVCSED 459
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I IT++ + S++ G+ S++K+++ + + P +V+ +LK L+
Sbjct: 460 QRTQIVFAITAKAGDLLTVSINMHGTRSVQKVIETIKS-PEQFLMVVASLKPGIVNLIKD 518
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G V CL+ + +F+++A HC+ LA GC + + G R ++
Sbjct: 519 LNGYHVAECCLQHLM--PGYIEFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLRL 576
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I NA LS++ GNYVVQ+V ELE + + L G+Y LS+ K S VV+ C
Sbjct: 577 LSAIIANALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSSNVVEKC 636
Query: 340 LKYRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
LKY + I++EF ++ Q+ ++ D Y NYVIQTAL + LH L+ ++
Sbjct: 637 LKYAGEERFARIIQEF-MDHPQLDQMMLDPYANYVIQTALNHSKGA----LHAALLEAIR 691
Query: 398 QNLDSLRFG-YGKHVYNFIKDCDLQ 421
++ +LR YGK V + C L+
Sbjct: 692 PHIPALRTNPYGKKV---LSSCGLK 713
>gi|302756987|ref|XP_002961917.1| hypothetical protein SELMODRAFT_75995 [Selaginella moellendorffii]
gi|300170576|gb|EFJ37177.1| hypothetical protein SELMODRAFT_75995 [Selaginella moellendorffii]
Length = 322
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 173/312 (55%), Gaps = 13/312 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A+D+ G ++LQ + G + L K+F + + ++ + + ++ K +E C EDQ L
Sbjct: 12 IAKDQYGCRFLQRRFDEGVAEDLQKIFEEIIDHIVDLMTDPFGNYLVQKLLEVCTEDQRL 71
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
I + S D+L + S++ G+ +++KL++ + + P + ++ +L++ +L+ G
Sbjct: 72 EILRVVCSGDEL-ISISLNMHGTRAVQKLIETLKS-PEQVSMITSSLEQGIVILIKDLNG 129
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV +CL+++ N +N FI+ AA +HC+ + H GC + +D KG ++++++
Sbjct: 130 NHVVQRCLQRL--GNEENQFIFDAAAQHCVEVGTHRHGCCVLQRCVDFSKGVQKERLVGE 187
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ NA LS++ GNYVVQ++L+ E P++ + L GH+ L++ K S VV+ CLK
Sbjct: 188 IAANALVLSQDQYGNYVVQYILD-EAPWIAPEVMAQLEGHHAHLAMQKFSSNVVEKCLKQ 246
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNL 400
I+ E L S + ++ D + NYVIQ AL T LH LV ++ +L
Sbjct: 247 GADDKRARIIHE-LTKSAFLGQLLQDPFANYVIQCALTVTKGA----LHASLVEAIRPHL 301
Query: 401 DSLRFG-YGKHV 411
+LR YGK +
Sbjct: 302 PALRSSPYGKRI 313
>gi|357151863|ref|XP_003575930.1| PREDICTED: pumilio homolog 12-like [Brachypodium distachyon]
Length = 767
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 162/309 (52%), Gaps = 17/309 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +LA+D+ G ++LQ+ G ++KVF + + ++ + + ++ K +E C+ED
Sbjct: 445 IYMLAKDQNGCRFLQKVFAQGSQEDVEKVFGEIIDHIGDLMVDPFGNYLVQKLLEGCSED 504
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +RI ++T + S + G+ +++K+++ + N P + V+ AL LM+
Sbjct: 505 QRMRILCEVTKMPGQLIAVSCNMHGTRAVQKIIETI-NSPDQVSKVVSALSPGAMHLMLD 563
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
GS V +CL+++ + F+ AA H L LA H+QGC + I+ ++ +
Sbjct: 564 PNGSHVANRCLQKLLPESKV--FLLDAATLHYLELATHQQGCCIIQKCIEHSNDEQKYSL 621
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I +A +LS + GNYV+Q +L + I L GH+ LS+ KCGS VV+NC
Sbjct: 622 LSNIISSALTLSDDQFGNYVIQSILNHNIGWATCKIVDELEGHFGYLSMQKCGSHVVENC 681
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL-----------IETMRPNSL 386
L+ + + I+ E L+N ++ + D++GN+VIQTAL +E +RP++
Sbjct: 682 LRQAPQHKRDRIIGE-LMNDPKLPHIMVDQFGNFVIQTALEHCKGTLHTAFVEAIRPHAA 740
Query: 387 HLHQRLVTK 395
+ + K
Sbjct: 741 AMQSHMYGK 749
>gi|115451267|ref|NP_001049234.1| Os03g0191700 [Oryza sativa Japonica Group]
gi|108706609|gb|ABF94404.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113547705|dbj|BAF11148.1| Os03g0191700 [Oryza sativa Japonica Group]
Length = 708
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 170/311 (54%), Gaps = 11/311 (3%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I +A+D+ G ++LQ+K G + D +F + + +++ N +A ++ K ++
Sbjct: 392 AKGYIYFMAKDQNGCRFLQQKFEEGKDQ-ADLIFEGIIDHIPELMANSFANYLVQKLLDV 450
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
C+E+Q LRI +T ++ S++ G+ SI+KL++ V R ++ L++ AL+ F
Sbjct: 451 CDEEQRLRIIAVLTEDPVKLLRVSLNSHGTRSIQKLIETVKTRKQIM-LIISALQPGFIH 509
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ V+ +CL+ NK FI++AA HC+ +A + GC + + I G
Sbjct: 510 LVNDPNGNHVIQKCLKNFDAEENK--FIFEAAATHCVEMAINRHGCCVLQSCISNAYGEY 567
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + L+++ GNYV+Q+VL+L+ P+ + +G+Y+ LS K GS V
Sbjct: 568 QIKLIMQICADGLYLAQDQFGNYVIQYVLDLKIPFANAQLASLFQGNYVYLSKQKVGSNV 627
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
V+ CLK + I+ E L+++ ++ D Y NYVI TAL++T HL LV
Sbjct: 628 VEKCLKVFPDDDKAAIIWE-LISASHFEQLLQDPYANYVIHTALVQTRG----HLRSALV 682
Query: 394 TKLQQNLDSLR 404
+ + +++R
Sbjct: 683 NAILPHEEAIR 693
>gi|449452779|ref|XP_004144136.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 698
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 164/318 (51%), Gaps = 10/318 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L+A+D+ G ++LQ K G ++K+F + + +++ + + ++ K +E CN++
Sbjct: 385 IFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDN 444
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++I +IT V S D G+ +I+K+++ + + + +++ ALK LM
Sbjct: 445 QRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQV-HMIVSALKSGIVTLMKN 503
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V CL+ Y + + ++ AA C+ LA GC + + R +
Sbjct: 504 INGNHVAQHCLD--YLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNL 561
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA +S++ GNYVVQ +L+L + E I L G+Y DLS+ K S VV+ C
Sbjct: 562 INEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKC 621
Query: 340 LKYRIT-VNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
L++ + IV E L+N + ++ D YGNY IQTAL T LH +LV ++
Sbjct: 622 LQFAGGQITKIVLE-LINDPRFDKIMQDPYGNYAIQTALNNTEGT----LHTKLVEAIRP 676
Query: 399 NLDSLRFG-YGKHVYNFI 415
++ LR YGK V +
Sbjct: 677 HVPVLRMSPYGKKVLAIV 694
>gi|449493598|ref|XP_004159368.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 731
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 164/318 (51%), Gaps = 10/318 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L+A+D+ G ++LQ K G ++K+F + + +++ + + ++ K +E CN++
Sbjct: 418 IFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDN 477
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++I +IT V S D G+ +I+K+++ + + + +++ ALK LM
Sbjct: 478 QRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQV-HMIVSALKSGIVTLMKN 536
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V CL+ Y + + ++ AA C+ LA GC + + R +
Sbjct: 537 INGNHVAQHCLD--YLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNL 594
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA +S++ GNYVVQ +L+L + E I L G+Y DLS+ K S VV+ C
Sbjct: 595 INEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKC 654
Query: 340 LKYRIT-VNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
L++ + IV E L+N + ++ D YGNY IQTAL T LH +LV ++
Sbjct: 655 LQFAGGQITKIVLE-LINDPRFDKIMQDPYGNYAIQTALNNTEGT----LHTKLVEAIRP 709
Query: 399 NLDSLRFG-YGKHVYNFI 415
++ LR YGK V +
Sbjct: 710 HVPVLRMSPYGKKVLAIV 727
>gi|384252508|gb|EIE25984.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 380
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 174/321 (54%), Gaps = 13/321 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +A+D+ G ++LQ K G + V V E +++ + + ++ K ++ C+ED
Sbjct: 64 VMAVAKDQNGCRFLQRKFDEGGPAAIQAVLPEVLEHLIELMMDPFGNYLIQKLLDRCSED 123
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + L+ ++ + VQ +++ G+ +++KL++ + +R + LV AL+ L+
Sbjct: 124 QRLAV-LKKAAERKELVQVALNTHGTRAVQKLIETLTSREQVA-LVTDALRGGVVSLIRD 181
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+++ +++ F+Y AA H + +A H GC + ID P+++++
Sbjct: 182 LNGNHVIQRCLQRLGPEDSQ--FVYDAAAAHTMDIATHRHGCCVLQRCIDFATPPQKRRL 239
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ +A LS++ GNYVVQ+VLEL E+I L GHY +L+ K S VV+ C
Sbjct: 240 VDQITSHALPLSQDPFGNYVVQYVLELGHSEATESIMRQLCGHYPELAQQKFSSNVVEKC 299
Query: 340 LKYR----ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
LK + V LLNS + R+ D Y NYV+Q+AL +S LH LV
Sbjct: 300 LKLGGQSLAEMRERVIRELLNSPLMPRLLQDPYANYVLQSAL----SVSSAQLHNDLVDA 355
Query: 396 LQQNLDSLRFG-YGKHVYNFI 415
++ L SLR +GK + + I
Sbjct: 356 MRPYLPSLRGTPHGKRILSKI 376
>gi|15242461|ref|NP_196523.1| pumilio 21 [Arabidopsis thaliana]
gi|75264321|sp|Q9LXC5.1|PUM21_ARATH RecName: Full=Putative pumilio homolog 21; Short=APUM-21;
Short=AtPUM21
gi|7671428|emb|CAB89369.1| putative protein [Arabidopsis thaliana]
gi|9758989|dbj|BAB09516.1| unnamed protein product [Arabidopsis thaliana]
gi|332004034|gb|AED91417.1| pumilio 21 [Arabidopsis thaliana]
Length = 517
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 175/348 (50%), Gaps = 34/348 (9%)
Query: 87 FQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFL----DKVFNVVSEFTFQIICN 142
F A PF + L D+ S+Y + F+ DK N +S + C
Sbjct: 170 FNAPPFTPSS-----LTQPDDSSSRYSGKPFPPPPLSFVSPGVDKDRNWLSSLLDMMTCA 224
Query: 143 QYARFV-FGKFIETCN-------EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKA 194
Q RF F K+++ + E L +I +T+ ++F+ + +++GS ++R L +
Sbjct: 225 Q--RFTEFQKYLQDLDTYPTAERESHLFKIGSALTTTKRIFLHLATNQYGSQALRILFR- 281
Query: 195 VANRPPLLD-LVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLY 253
R P LD L+ A+ F LLM K G +++ + + K + +Y+ E+ L+
Sbjct: 282 ---RSPSLDHLLFCAVDTNFFLLMSDKYGRGLIIPAIRAV--DKTKKESLYKLTYEYTLH 336
Query: 254 LACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIE 313
LA E GC+ +NN + E++G R I ++ NA LS + G +VVQ++L L++P
Sbjct: 337 LARLETGCLALNNVLQEIRGIYRDLIFECVANNADWLSFDPYGTHVVQNILILQNPVATT 396
Query: 314 TICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVI 373
I LRG + L++ + GS+VV+ CLK + ++EEF N+ + R+ DK+GN+V+
Sbjct: 397 AIAERLRGSFFRLAMERQGSYVVEKCLKSDFARDQVLEEFRGNAKEWVRMTTDKFGNFVV 456
Query: 374 QTALI----ETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIKD 417
Q+AL + MRP L + V KL+ + + G G++ I++
Sbjct: 457 QSALRVMKEKEMRP----LLREFVEKLRPHFGKMEIGRGRNTLRVIQE 500
>gi|242071465|ref|XP_002451009.1| hypothetical protein SORBIDRAFT_05g022550 [Sorghum bicolor]
gi|241936852|gb|EES09997.1| hypothetical protein SORBIDRAFT_05g022550 [Sorghum bicolor]
Length = 734
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 158/308 (51%), Gaps = 16/308 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ +L++D+ ++LQ+ LT G +DK+F+ + E +++ + A ++ K +E C D
Sbjct: 413 VCILSKDQDACRFLQKVLTEGTQEDIDKIFSEIIENVGELMVDPTAHYLVQKILEVCTND 472
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +IT +AS + G+ ++K+++ + N + +V+ L LM
Sbjct: 473 QRTYLIREITKAPISLHKASCNMHGTRVVQKVIETM-NTSDQVSMVVSTLNTGIMRLMTD 531
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V L CLE++ + F+ + A L LA GC + I+ +R +
Sbjct: 532 SYGNHVALHCLEKLLPEHKA--FLLETATSRYLQLARDRHGCCVLQKCIENSSDEQRNNL 589
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I+ +A LS + GNYV+Q +L L + I L GH+ +LS+ KCGS VV++C
Sbjct: 590 LCKITSSALVLSEDQYGNYVIQFILTLNIEWATTRIVDELAGHFGNLSMQKCGSHVVEHC 649
Query: 340 LKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL-----------IETMRPNSLH 387
LK R + I+ E L++ ++ + D+YGN+VIQTAL +ET+RP++
Sbjct: 650 LKLPRPICDRIINE-LMHDPKLLHIILDQYGNFVIQTALKQCQGEQHAAFVETIRPHTAV 708
Query: 388 LHQRLVTK 395
L + K
Sbjct: 709 LQSNMYGK 716
>gi|293333240|ref|NP_001169187.1| hypothetical protein [Zea mays]
gi|223975405|gb|ACN31890.1| unknown [Zea mays]
gi|413925374|gb|AFW65306.1| hypothetical protein ZEAMMB73_251972 [Zea mays]
Length = 754
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 161/309 (52%), Gaps = 17/309 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ +L++D+ ++LQ+ L+ G +DK+F + + ++ + A ++ K +E C D
Sbjct: 432 VCMLSKDQDACRFLQKLLSEGTQEDIDKIFGEIIDNVGDLMVDPTAHYLVQKILEECTND 491
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +IT +AS + G+ ++K++ + N P + +++ AL LM
Sbjct: 492 QRTHMIREITKAPIKLHKASCNVHGTRVVQKVIDTM-NTPDQVSMLVSALNTGMMCLMTD 550
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV CL+++ + FI +AA L LA GC + I +R +
Sbjct: 551 SYGNHVVDHCLQKLLPEHKA--FILEAAASCYLQLARDRHGCCVLQKCIGHSSDEQRNNL 608
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I+ +A +LS + GNYV+Q +L+L ++ + L GH+ +LS+ KCGS VV++C
Sbjct: 609 LCKITSSALTLSEDPYGNYVIQFILDLNIEWITVRVVDELAGHFGNLSMQKCGSHVVEHC 668
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL-----------IETMRPNSL 386
LK R+ + I+ E L++ ++ + D+YGN+VIQTAL +ET++P++
Sbjct: 669 LKLAPRLICDRIINE-LMHDPKLLDIILDQYGNFVIQTALKQCQGEHHAAFVETIKPHTA 727
Query: 387 HLHQRLVTK 395
+ + K
Sbjct: 728 VMQSNMYGK 736
>gi|356512063|ref|XP_003524740.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 451
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 164/305 (53%), Gaps = 12/305 (3%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I L+A+D+ G ++LQ+ G + +FN + + +++ N + ++ K ++
Sbjct: 133 AQGYIYLMAKDQHGCRFLQKMFDEGTPEDVLMIFNEIIDHVVELMMNPFGNYLMQKLLDV 192
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
CNE+Q ++I L IT + V+ S++ G+ ++KL++ + R + L + AL+ F
Sbjct: 193 CNEEQRMQILLIITEEPGQLVRISLNTHGTRVVQKLVETLKTRQQI-SLAVSALEPGFLA 251
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ VV +CL + + +NK FI+ AA ++C+ +A H+ GC + I G
Sbjct: 252 LIKDLNGNHVVQRCLLCLSNEDNK--FIFVAAAKYCVDIATHQHGCCVLQRCIGHSSGEY 309
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
R++++ I NA L+++ GNYVVQ +L+L+ + I G+Y+ LS K GS V
Sbjct: 310 REKLIAEICANALLLAQDQFGNYVVQFILDLKISSVTTCIRLQFEGNYVHLSRQKFGSHV 369
Query: 336 VQNCLKYRITVN---YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
V+ CL N I+E LL++ + D + NYV+Q+AL R + HLH L
Sbjct: 370 VEKCLAAFNDENRSRVILE--LLSTPHFEHLLQDPHANYVVQSAL----RHSEGHLHNLL 423
Query: 393 VTKLQ 397
V ++
Sbjct: 424 VEAIE 428
>gi|357120480|ref|XP_003561955.1| PREDICTED: uncharacterized protein LOC100842718 [Brachypodium
distachyon]
Length = 685
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 162/306 (52%), Gaps = 9/306 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +A+D+ G ++LQ+K G + +D +F + +++ N +A ++ K ++ C+E+
Sbjct: 373 IYFMAKDQNGCRFLQQKFEEG-KQHVDAIFEGIINHIAELMTNSFANYLVQKLLDVCDEE 431
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q LRI +T ++ S++ G+ +++KL++ V R ++ L++ A++ F L+
Sbjct: 432 QRLRIIAVLTEDPVKLLRISLNTHGTRAVQKLIETVKIRKQIV-LIISAIQPGFMHLVND 490
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL NK FI++AA HC +A H GC + I +G + ++
Sbjct: 491 LNGNHVIQKCLTNFGVEENK--FIFEAAAAHCFEMAIHRHGCCVLQKCITSARGEYQAKL 548
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ + +A L+++ GNYVVQ+VL+ + P + G+Y+ LS K S VV+ C
Sbjct: 549 IVEVCAHAFQLAQDPFGNYVVQYVLDQKIPSANAHLAAQFEGNYVYLSKQKVSSNVVEKC 608
Query: 340 LKYRITVNYIVEEF-LLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
LK + F L++ ++ D + NYVI TAL+ + HLH LV ++
Sbjct: 609 LKVFSDEDKAAIVFDLISVTHFEQLLQDPFANYVIHTALVNSRG----HLHNALVEAIRP 664
Query: 399 NLDSLR 404
+ ++LR
Sbjct: 665 HEEALR 670
>gi|296422247|ref|XP_002840673.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636894|emb|CAZ84864.1| unnamed protein product [Tuber melanosporum]
Length = 971
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 167/320 (52%), Gaps = 11/320 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + +++ +F +++ + + ++ K +E N++
Sbjct: 599 IYELCKDQHGCRYLQKKLEERNPQYVQMIFLETHAHVVELMTDPFGNYLCQKLLEYANDE 658
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R L T+ QL V+ ++++ G+ +++K+++ + P + V+ AL+ L+
Sbjct: 659 Q--RTVLVNTAAPQL-VKIALNQHGTRALQKMIEYITT-PEQICTVIHALQSKVVELIQD 714
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + NK FI+ A E C+ + H GC + ID G ++ ++
Sbjct: 715 LNGNHVIQKCLNRWKKEENKLQFIFDAVGEDCVAVGTHRHGCCVLQRCIDHAAGAQKVKL 774
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ +A L + GNYVVQ++L+L DP L E + RG +LS K S V++ C
Sbjct: 775 IQKITAHAIELVVDPFGNYVVQYILDLADPMLSEPLILKFRGRVCELSKQKFSSNVIEKC 834
Query: 340 LKYR--ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
++ T ++EE L N ++ + D Y NYVIQTA+ S Q+LV ++
Sbjct: 835 IRVAEPPTKKILIEEMLPNQAELEALLRDSYANYVIQTAMDYA----SPETKQQLVDSIR 890
Query: 398 QNLDSLRF-GYGKHVYNFIK 416
L ++R YG+ + + I+
Sbjct: 891 PILPAIRMTPYGRRIQSKIQ 910
>gi|297845242|ref|XP_002890502.1| hypothetical protein ARALYDRAFT_335467 [Arabidopsis lyrata subsp.
lyrata]
gi|297336344|gb|EFH66761.1| hypothetical protein ARALYDRAFT_335467 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 159/298 (53%), Gaps = 14/298 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ L+A+D+ G ++LQ G + +FN V +++ + + ++ K ++ CNE+
Sbjct: 213 VYLMAKDQHGCRFLQRIFEDGSALDAMVIFNEVIPHVVELMMDPFGNYLMQKLLDVCNEE 272
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I L +TS+ ++ S++ +G+ +++L++++ R + LV AL+ F L+
Sbjct: 273 QRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQI-SLVKLALRPGFLNLIRD 331
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+ + N+FI++ A + C+ +A H GC + I G +R+++
Sbjct: 332 LNGNHVIQRCLKCL--STKDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKL 389
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS N+ L+++ GNY VQ VLEL D I + L+GHY++LS+ K S +V+ C
Sbjct: 390 VTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERC 449
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRPNSL 386
L + + L++ + D Y N+VIQ A L+E +RP+S+
Sbjct: 450 LTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHATLVEVIRPHSI 507
>gi|242085540|ref|XP_002443195.1| hypothetical protein SORBIDRAFT_08g015000 [Sorghum bicolor]
gi|241943888|gb|EES17033.1| hypothetical protein SORBIDRAFT_08g015000 [Sorghum bicolor]
Length = 678
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 162/313 (51%), Gaps = 12/313 (3%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
LA+D+ G ++LQ T G KVF+ V E +++ + + ++ K +E CN++Q +
Sbjct: 363 LAKDQNGCRFLQRIFTEGSQEDAQKVFDGVIEHIDELMIDPFGNYLIQKLLEQCNDNQKM 422
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
I +IT V+ + + G+ ++K+++ V+ + +V+ AL LMM G
Sbjct: 423 HILYEITKIPGQLVKVACNMHGTRVVQKVIETVSTSDEV-SMVVSALSHGAITLMMDANG 481
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
S V +CL+++ F+ AA ++C+ LA QGC + I ++ ++LY
Sbjct: 482 SHVAHRCLQKLSPKCKA--FLLNAATKYCVELAKDRQGCCIIQKCIIHANKEQKNKLLYS 539
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ A +L+ + GNYV+Q +L+L+ + + I L G Y LS+ KC S VV+ CLK
Sbjct: 540 ITGRALNLAEHQYGNYVIQFILDLKVTWAMNEILDKLEGSYGYLSMQKCSSNVVEKCLKE 599
Query: 343 R---ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQN 399
I+E L+N ++ + D+YGNYVIQTA E + LV ++ +
Sbjct: 600 ARGPKRAKIILE--LINDPKLQNILLDQYGNYVIQTAFREC---GDAAVEAALVRAIKPH 654
Query: 400 LDSLRFG-YGKHV 411
+ +LR +GK +
Sbjct: 655 ISALRNNMFGKRI 667
>gi|225435792|ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
Length = 711
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 168/315 (53%), Gaps = 13/315 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +++D+ G ++LQ K T G + K+F + + +++ + + ++ K +E C ED
Sbjct: 399 IYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTED 458
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++I IT + V+ S + G+ +++K+++ + +++ +LK L+
Sbjct: 459 QQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETLRTSEQ-FSMIVSSLKPGIVTLIKD 517
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V CL+ + +F+++AA+ +C+ LA GC + + +R +I
Sbjct: 518 MNGNHVAQCCLQNLM--PEYREFLFEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRI 575
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+Y I+ NA LS++ GNYVVQ+V E P+ I I L G+Y DLSL K S VV+ C
Sbjct: 576 IYEITSNALILSQDPFGNYVVQYVFEF--PWAIVDILDQLEGNYGDLSLQKYSSNVVEKC 633
Query: 340 LKYRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L++ + I++E L+N+ +I ++ D YGNYVIQ AL + +H L+ ++
Sbjct: 634 LQHAGDEHRHCIIQE-LINNPRIDQIMQDPYGNYVIQAALNNSKGA----IHAALIEVIR 688
Query: 398 QNLDSLRFG-YGKHV 411
++ LR YGK V
Sbjct: 689 SHVHVLRTSPYGKKV 703
>gi|297746500|emb|CBI16556.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 168/315 (53%), Gaps = 13/315 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +++D+ G ++LQ K T G + K+F + + +++ + + ++ K +E C ED
Sbjct: 410 IYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTED 469
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++I IT + V+ S + G+ +++K+++ + +++ +LK L+
Sbjct: 470 QQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETLRTSEQ-FSMIVSSLKPGIVTLIKD 528
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V CL+ + +F+++AA+ +C+ LA GC + + +R +I
Sbjct: 529 MNGNHVAQCCLQNLM--PEYREFLFEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRI 586
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+Y I+ NA LS++ GNYVVQ+V E P+ I I L G+Y DLSL K S VV+ C
Sbjct: 587 IYEITSNALILSQDPFGNYVVQYVFEF--PWAIVDILDQLEGNYGDLSLQKYSSNVVEKC 644
Query: 340 LKYRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L++ + I++E L+N+ +I ++ D YGNYVIQ AL + +H L+ ++
Sbjct: 645 LQHAGDEHRHCIIQE-LINNPRIDQIMQDPYGNYVIQAALNNSKGA----IHAALIEVIR 699
Query: 398 QNLDSLRFG-YGKHV 411
++ LR YGK V
Sbjct: 700 SHVHVLRTSPYGKKV 714
>gi|147789082|emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
Length = 1051
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 170/322 (52%), Gaps = 17/322 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +++D+ G ++LQ K T G + K+F + + +++ + + ++ K +E C ED
Sbjct: 440 IYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTED 499
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++I IT + V+ S + G+ +++K+++ + +++ +LK L+
Sbjct: 500 QQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETLRTSEQ-FSMIVSSLKPGIVTLIKD 558
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V CL+ + +F+ +AA+ +C+ LA GC + + +R +I
Sbjct: 559 MNGNHVAQCCLQNLMPE--YREFLXEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRI 616
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+Y I+ NA LS++ GNYVVQ+V E P+ I I L G+Y DLSL K S VV+ C
Sbjct: 617 IYEITSNALILSQDPFGNYVVQYVFEF--PWAIVDILDQLEGNYGDLSLQKYSSNVVEKC 674
Query: 340 LKYRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L++ + I++E L+N+ +I ++ D YGNYVIQ AL + +H L+ ++
Sbjct: 675 LQHAGDEHRHCIIQE-LINNPRIDQIMQDPYGNYVIQAALNNSKGA----IHAALIEVIR 729
Query: 398 QNLDSLRFG-YGKHVYNFIKDC 418
++ LR YGK V KDC
Sbjct: 730 SHVHVLRTSPYGKKV----KDC 747
>gi|412986524|emb|CCO14950.1| predicted protein [Bathycoccus prasinos]
Length = 699
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 187/369 (50%), Gaps = 30/369 (8%)
Query: 60 STVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTS 119
S VP +G+ + S F + + C I +LA+D+ G ++LQ K
Sbjct: 341 SAVPGANGSPTAEELAEMDSRFGS--------IEECVGQ-ISILARDQYGCRFLQRKFDE 391
Query: 120 GDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQ------ 173
S +D F+ + E ++ + + ++ K +E C++ Q + ++ ++
Sbjct: 392 DGSAAIDACFDEIIEEAVDLMMDPFGNYLLQKLLECCSDKQRADVVRAVSVVNENANTGL 451
Query: 174 -LFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQ 232
V +++ G+ +++KL++ +++ + +L KAL+ L+ G+ VV +CL++
Sbjct: 452 PELVSIALNAHGTRAVQKLIETLSSDEEI-ELTTKALRPGVVTLIKDLNGNHVVQRCLQR 510
Query: 233 IYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSR 292
+ +N+ FIY+AA +H + +A H GC + ID +++ ++ I+ A +LSR
Sbjct: 511 LSAEDNQ--FIYEAAKKHSVEIATHRHGCCVLQRCIDHATEEQKRPLVQEIADQALTLSR 568
Query: 293 NFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT-----VN 347
+ GNYVVQ++L+L + + L G+Y +LS+ K S VV+ CLK N
Sbjct: 569 DPFGNYVVQYILDLGLSWANAEVMMRLVGNYAELSMQKFSSNVVEKCLKLADQQLEEHRN 628
Query: 348 YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFG- 406
+V E +++S + R+ D YGNYV+Q+ L+ T P LH LV +++ +L ++
Sbjct: 629 VVVRE-IMSSPLLDRLLMDPYGNYVVQSTLMVTKGP----LHADLVERIRPHLPLIKNSP 683
Query: 407 YGKHVYNFI 415
+GK + +
Sbjct: 684 FGKRILRLL 692
>gi|219887147|gb|ACL53948.1| unknown [Zea mays]
gi|413916364|gb|AFW56296.1| hypothetical protein ZEAMMB73_526143 [Zea mays]
Length = 685
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 156/313 (49%), Gaps = 12/313 (3%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
LA+D+ G ++LQ G KVF+ V E +++ + + ++ K E CN++Q +
Sbjct: 370 LAKDQNGCRFLQRIFIEGSREDARKVFDGVIEHIDELMVDPFGNYLIQKIFEKCNDNQKM 429
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
I +IT ++ + + G+ ++K++++++ + +V+ AL LMM G
Sbjct: 430 HILYEITKIPGQLIEVACNMHGTRVVQKVIESISTSDEV-SMVVSALSHGAITLMMDSNG 488
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
V +CL ++ F+ AA ++C+ LA QGC + I +R ++LY
Sbjct: 489 CHVAERCLLKLSPEGKA--FLVNAATKYCVELAKDRQGCCIIQKCIAHASKEQRNRLLYS 546
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK- 341
I+ A L+ + GNYV+Q VL L + + L G Y LS KC S VV+ CL+
Sbjct: 547 ITTRALELAEDEYGNYVIQFVLGLGVAWATNEVLDKLEGSYGYLSTQKCSSNVVEKCLRE 606
Query: 342 --YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQN 399
R I+E L++ ++ V DKYGNYVIQTAL E+ + L+ ++ +
Sbjct: 607 APERERARIILE--LIHDPRLLNVLVDKYGNYVIQTALRES---EGTAVEAALIRAIKPH 661
Query: 400 LDSLRFG-YGKHV 411
+LR YGK V
Sbjct: 662 AGALRNNMYGKRV 674
>gi|225459320|ref|XP_002284170.1| PREDICTED: uncharacterized protein LOC100257510 [Vitis vinifera]
Length = 724
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 158/306 (51%), Gaps = 9/306 (2%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I LA+D G ++LQ + VFN + +++ N + ++ K +
Sbjct: 408 AQGCIYSLAKDHNGCRFLQRMFDGATVEDVQLVFNETIKHVVELMMNPFGNYLMQKLFDV 467
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
CNEDQ ++I L +T + V+ S++ G+ ++KL+ + R + LV+ AL+ F
Sbjct: 468 CNEDQRMQIVLALTEEPGELVRISLNAHGTRVVQKLVMTLKTRQQI-SLVVLALEPYFLD 526
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L G+ VV +CLE + + K F + A ++C+ +A H GC + I G
Sbjct: 527 LTKDHHGNHVVQRCLEYLSCEDIK--FFFYDAAKYCVDIATHRHGCCVLQRCITRSTGKH 584
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++++ IS N L+++ GNYV+Q+++EL+ P I ++ G+Y+ LS+ K S V
Sbjct: 585 GEKLVAEISANGLLLAQDDFGNYVIQYIIELKIPSAIASLMSQFEGNYVHLSMQKFSSHV 644
Query: 336 VQNCLKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
V+ CLK+ + IV EF L+ ++ D + NYVIQ+AL T P LH L+
Sbjct: 645 VEKCLKHLEESRPRIVHEF-LSVPHFEQLMQDPFANYVIQSALEVTKGP----LHASLIE 699
Query: 395 KLQQNL 400
++ ++
Sbjct: 700 AVRPHI 705
>gi|297809067|ref|XP_002872417.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318254|gb|EFH48676.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 540
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 163/284 (57%), Gaps = 11/284 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDK--VFNVVSEFTFQIICNQYARFVFGKFIETCN 157
+ L+A+D+ G ++LQ+ + G+ RF+D VF V ++ + + + K +E CN
Sbjct: 262 VCLMAKDQLGCRFLQKFV--GEGRFVDVMIVFKEVINHIAELGIDPFGNYFIQKLLEVCN 319
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
E+Q +I +++TS+ L ++ S++ +G+ ++KL++ V + + LV AL F L+
Sbjct: 320 EEQRTQILIRLTSKPGLLIKISINNYGTRVVQKLIETVTTKEQ-ISLVKSALVPGFLSLV 378
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+L CL+ + N N FI +AA++ C +A H GC + + G + +
Sbjct: 379 RELNGNHVILNCLK--FFGPNDNKFILEAAIKFCTEIATHRHGCCVLQRCVSYSVGEQHE 436
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
+++ IS N+ L+++ GNYVVQ+++E + + + F LRG+Y+ L+ K GS VV+
Sbjct: 437 KLVGEISRNSLLLAQDPYGNYVVQYIIEKKVGGV--NVMFELRGNYVKLATQKFGSHVVE 494
Query: 338 NCLK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIET 380
C++ Y + + IV E L++ ++ D Y NYVIQ+AL +T
Sbjct: 495 KCIRFYPESRSQIVHE-LVSVPNFEQLVQDPYANYVIQSALSKT 537
>gi|293332512|ref|NP_001169625.1| uncharacterized protein LOC100383506 [Zea mays]
gi|224030501|gb|ACN34326.1| unknown [Zea mays]
gi|414865276|tpg|DAA43833.1| TPA: hypothetical protein ZEAMMB73_925464 [Zea mays]
Length = 694
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 154/305 (50%), Gaps = 11/305 (3%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A+D+ G +YLQ+K G +D +F + ++ + ++ + +E C+E Q L
Sbjct: 383 MAKDKNGCRYLQDKFLEG-KHHVDAIFEGIINHIADLMISSAGNYLVQEMVEVCDEGQRL 441
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L +T + S++ G+ +++L++ V +R L+ L++ AL+ F LL+ G
Sbjct: 442 RIILALTQDPVKMIAISLNTHGTRVVQRLIEKVTSRE-LIILIISALQPGFMLLVNDPNG 500
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL +NK FI++ A + +A GC + I +G + ++
Sbjct: 501 THVIQKCLANFGAEDNK--FIFEGAAANYFNMAVQRHGCCVLQKCISTARGRYQANLIVK 558
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I + L+++ GNYVVQHVL+ + PY + G YI LS K S VVQ C+++
Sbjct: 559 ICAHGFELAQDIFGNYVVQHVLKQKIPYANARLASLFEGKYIYLSKQKVSSNVVQRCIEF 618
Query: 343 --RITVNYIVEEFLLNSDQIF-RVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQN 399
IV EFLL F ++ D Y NYVI TAL T HL LV ++ +
Sbjct: 619 FPDDAKAVIVHEFLLLRGSHFEQLVTDPYANYVINTALNNTRG----HLLNALVEAIRPH 674
Query: 400 LDSLR 404
D++R
Sbjct: 675 EDAIR 679
>gi|225448285|ref|XP_002271130.1| PREDICTED: uncharacterized protein LOC100266352 [Vitis vinifera]
Length = 810
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 152/284 (53%), Gaps = 6/284 (2%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I ++A+D+ G ++LQ G + + +FN + + +++ N + ++ K ++
Sbjct: 492 AQGHIYMIAKDQHGCRFLQRMFDEGTPQDVQIIFNEIIDHVVELMMNPFGNYLMQKLLDV 551
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
CNE+Q ++I + +T + V+ S++ G+ ++KL++ + R + V+ AL+ F
Sbjct: 552 CNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIETLKTRQQI-SRVISALEPGFLA 610
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ V+ +CL+ + +NK FI+ AA ++C+ +A H+ GC + I G
Sbjct: 611 LIKDLNGNHVIQRCLQCLSKEDNK--FIFVAAAKYCVEIATHQHGCCVLQRCISHSTGEY 668
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
R+ ++ IS N L+++ GNYVVQ +LEL+ P + G+Y+ LS + S V
Sbjct: 669 RENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEGNYVHLSTQRFSSHV 728
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
V+ CL N IV E LL++ ++ + NYVIQ AL
Sbjct: 729 VEKCLTVCTEENQSRIVHE-LLSTSHFEQLLQHPHANYVIQKAL 771
>gi|9454526|gb|AAF87849.1|AC073942_3 Contains similarity to RNA binding protein PufA from Dictyostelium
discoideum gi|5106561 and contains multiple
Pumilio-family RNA binding PF|00806 domains [Arabidopsis
thaliana]
Length = 514
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 158/298 (53%), Gaps = 14/298 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ +A+D+ G ++LQ G + +F+ V +++ + + ++ K ++ CNE+
Sbjct: 202 VYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKLLDVCNEE 261
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I L +TS+ ++ S++ +G+ +++L++++ R + LV AL+ F L+
Sbjct: 262 QRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQI-SLVKSALRPGFLNLIRD 320
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+ + N+FI++ A + C+ +A H GC + I G +R+++
Sbjct: 321 LNGNHVIQRCLQCL--STEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKL 378
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS N+ L+++ GNY VQ VLEL D I + L+GHY++LS+ K S +V+ C
Sbjct: 379 VTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERC 438
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRPNSL 386
L + + L++ + D Y N+VIQ A L+E +RP+S+
Sbjct: 439 LTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHATLVEVIRPHSI 496
>gi|15219849|ref|NP_173643.1| protein pumilio 8 [Arabidopsis thaliana]
gi|313471411|sp|Q9LM20.2|PUM8_ARATH RecName: Full=Putative pumilio homolog 8, chloroplastic;
Short=APUM-8; Short=AtPUM8; Flags: Precursor
gi|332192094|gb|AEE30215.1| protein pumilio 8 [Arabidopsis thaliana]
Length = 515
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 158/298 (53%), Gaps = 14/298 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ +A+D+ G ++LQ G + +F+ V +++ + + ++ K ++ CNE+
Sbjct: 203 VYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKLLDVCNEE 262
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I L +TS+ ++ S++ +G+ +++L++++ R + LV AL+ F L+
Sbjct: 263 QRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQI-SLVKSALRPGFLNLIRD 321
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+ + N+FI++ A + C+ +A H GC + I G +R+++
Sbjct: 322 LNGNHVIQRCLQCL--STEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKL 379
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS N+ L+++ GNY VQ VLEL D I + L+GHY++LS+ K S +V+ C
Sbjct: 380 VTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERC 439
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRPNSL 386
L + + L++ + D Y N+VIQ A L+E +RP+S+
Sbjct: 440 LTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHATLVEVIRPHSI 497
>gi|356528052|ref|XP_003532619.1| PREDICTED: uncharacterized protein LOC100799294 [Glycine max]
Length = 779
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 160/305 (52%), Gaps = 12/305 (3%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I L+++D+ G ++LQ+ G + +FN + + + + N + ++ K ++
Sbjct: 461 AQGYIYLMSKDQHGCRFLQKMFDEGTPEDVQVIFNEIIDHVVEPMVNPFGNYLMQKLLDV 520
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
CNE+Q ++I L IT + V+ S++ G+ ++KL++ + R + L + AL+ F
Sbjct: 521 CNEEQRMQILLIITEEPGQLVRISLNTHGTRVVQKLIETLKTRQQI-SLAVSALEPGFLA 579
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ VV +CL + + +NK FI+ AA ++C+ +A H+ GC + I G
Sbjct: 580 LIKDLNGNHVVQRCLLCLSNEDNK--FIFVAAAKYCVDIATHQHGCCVLQRCIGHSNGEY 637
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+++++ I NA L+++ GNYVVQ +L+L+ P I G+Y LS K GS V
Sbjct: 638 QEKLIAEICANALLLAQDQFGNYVVQFILDLKIPSATACIRLQFEGNYAHLSRQKFGSHV 697
Query: 336 VQNCLKYRITVN---YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
V+ CL N I+E LL+ + D + NYV+Q+AL R + LH L
Sbjct: 698 VEKCLAVFNDENRSRVILE--LLSMPHFEHLLQDPHANYVVQSAL----RHSEGRLHNLL 751
Query: 393 VTKLQ 397
V ++
Sbjct: 752 VEAIE 756
>gi|115486015|ref|NP_001068151.1| Os11g0579900 [Oryza sativa Japonica Group]
gi|77551702|gb|ABA94499.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113645373|dbj|BAF28514.1| Os11g0579900 [Oryza sativa Japonica Group]
gi|125577613|gb|EAZ18835.1| hypothetical protein OsJ_34373 [Oryza sativa Japonica Group]
gi|215717155|dbj|BAG95518.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 746
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 155/309 (50%), Gaps = 17/309 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +LA+D+ G ++LQ+ T G +K+ + + +++ + + ++ K +E C++D
Sbjct: 424 IYMLAKDQNGCRFLQKVFTEGTKEDFEKILAEIIDHFGELMIDPFGNYLVQKLLEECSDD 483
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q RI +IT + + + G+ +++K++ + N P + V+ AL LM
Sbjct: 484 QRTRIICEITRVPGELITVACNMHGTRTVQKVIDTI-NTPEQISKVVSALSPGAMRLMTD 542
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
GS V +CL+++ F+ A L LA + GC + I+ ++ +
Sbjct: 543 TNGSHVAQRCLKKLLPEYKA--FLLDVAALRFLRLAKDQHGCCIIQKCIEHSNDEQKYNL 600
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I+ +A SLS + GNYV+Q V+ L + I L+GH+ LS+ KCGS VV+NC
Sbjct: 601 LCKITSSALSLSEDQYGNYVIQFVVNLGIEWATSKIVKELKGHFGYLSMQKCGSHVVENC 660
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL-----------IETMRPNSL 386
LK + I+ E + +S ++ + D +GN+VIQTAL +E +RP++
Sbjct: 661 LKQASELDREMIIHELMADS-KLPHIMADPFGNFVIQTALKECKGELHSSFVEAIRPHAP 719
Query: 387 HLHQRLVTK 395
L + K
Sbjct: 720 ALQNDVYAK 728
>gi|356550783|ref|XP_003543763.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 623
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 155/288 (53%), Gaps = 5/288 (1%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I LA+D+ G ++LQ + G S + +FN V + +++ + + ++ K ++ C ED
Sbjct: 311 IYYLAKDQNGCRFLQRMIDEGTSEDVLVLFNGVIDDVVELMIDPFGNYLVQKLLDVCGED 370
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ L++ +T + V+ S++ G+ ++KL+ V +R + ++ A++ F L+
Sbjct: 371 ERLQVVSMLTEEPGQLVKTSLNLHGTRVVQKLITTVDSRKQIA-MLRSAIQSGFLALIKD 429
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+ Y N+FI+ AA + C+ +A H+ GC + ID G + +
Sbjct: 430 LNGNHVIQRCLQ--YFSCKDNEFIFYAATKFCVEIATHQHGCCVLQRCIDYSTGKYKDML 487
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I + L+++ GNYVVQ+++E+E+P + +G+Y +LS+ K S VV+ C
Sbjct: 488 VKEICRHGHLLAQDPFGNYVVQYIIEMENPSASLKLHSQFKGNYANLSMQKFSSHVVEKC 547
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLH 387
L + + + + + L + + R+ D Y NYV+Q AL T SLH
Sbjct: 548 LVHIVEIRSRIVQELSSFPHLERLLQDPYANYVVQRALGVTK--GSLH 593
>gi|357489613|ref|XP_003615094.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355516429|gb|AES98052.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 712
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 151/285 (52%), Gaps = 5/285 (1%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A+D+ G ++LQ + G ++ VFN V + +++ + + ++ K +E C +DQ L
Sbjct: 403 MAKDQNGGRFLQGMVEKGTVEDMEMVFNGVIDNVVELMMDPFGNYLVQKLLEFCRDDQRL 462
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+I L +T V+ S + G+ S++KL+ + +R + LV A+ F L+ G
Sbjct: 463 QIVLMLTKVPGQLVRTSFNTHGTRSVQKLISTLKSRRQIA-LVRSAILPGFLDLVKDLNG 521
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL +N +FI+ AA + +A H+ GC + ID KG ++++
Sbjct: 522 NHVIQRCLSCWSVQDN--EFIFDAATKFLTDVATHQHGCCVLQRCIDFSKGKSLEKLVKE 579
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I + SL+++ GNYV+Q+++EL+ P + + +G+Y+ LS K S VV+ CL Y
Sbjct: 580 ICKHGFSLAQDPYGNYVIQYIIELQIPSAMAKLTPQFKGNYVILSTQKFSSHVVEKCLIY 639
Query: 343 RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLH 387
+ + + LL+ R+ D Y NYV+Q AL T SLH
Sbjct: 640 IVETRARIVQELLSVPHFERLLQDPYANYVVQKALEYTK--GSLH 682
>gi|297839687|ref|XP_002887725.1| hypothetical protein ARALYDRAFT_476984 [Arabidopsis lyrata subsp.
lyrata]
gi|297333566|gb|EFH63984.1| hypothetical protein ARALYDRAFT_476984 [Arabidopsis lyrata subsp.
lyrata]
Length = 653
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 152/294 (51%), Gaps = 7/294 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ L+A+D+ G ++LQ G S +FN V +++ + + ++ K ++ C E+
Sbjct: 341 VYLMAKDQHGCRFLQRIFDEGTSADAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEE 400
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I L T++ ++ S++ +G+ +++L++ + + LV AL+ F L+
Sbjct: 401 QRTQIVLVATAEPGQLIRISLNAYGTRVVQRLVETIRTGK-QISLVKSALRPGFLDLIKD 459
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+ + +NK FI+ AA + C +A H GC + I +R+++
Sbjct: 460 LNGNHVIQRCLQCLSTEDNK--FIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKL 517
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS N+ L+++ GNY VQ V+EL P + + L+GHY+ LS+ K S +V+ C
Sbjct: 518 IAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERC 577
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
L + + L++ ++ D Y N+VIQ AL T P +H LV
Sbjct: 578 LMHCPESRPQIVRELISVPHFDQLLQDPYANFVIQAALAATKGP----IHASLV 627
>gi|336468401|gb|EGO56564.1| hypothetical protein NEUTE1DRAFT_65206 [Neurospora tetrasperma FGSC
2508]
gi|350289343|gb|EGZ70568.1| ARM repeat-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 676
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 177/327 (54%), Gaps = 18/327 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E C+ED
Sbjct: 270 IYTLCKDQHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNYLCQKLLELCSED 329
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + TS V+ +++ G+ +++K++ +V++ P ++L+++AL+ L+
Sbjct: 330 ERTVLIRNATSD---MVRIALNAHGTRALQKMIDSVSS-PAQINLIIEALRNRVVELIQD 385
Query: 220 KPGSSVVLQCLEQIYHHNNKND--FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL ++ N D FI+ A ++C+ + H GC + ID G ++
Sbjct: 386 LNGNHVIQKCLNKL----NATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDHADGAKKI 441
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ I+ NA +L ++ GNYVVQ++++L +P E + G LS K S VV+
Sbjct: 442 WLIERITANAVTLVQDPFGNYVVQYIIDLNEPSFTEPLVGQFLGRIPQLSKHKFSSNVVE 501
Query: 338 NCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
CL+ + + IV E +++ ++I ++ D YGNYV+QTAL + P+ H +LV
Sbjct: 502 KCLRCASPNSKDRIVSE-IMSQNEIKQLMQDSYGNYVVQTAL-DYATPSMKH---QLVEA 556
Query: 396 LQQNLDSLRFG-YGKHVYNFIKDCDLQ 421
++ +L ++R YG+ + I+ D Q
Sbjct: 557 IRPHLPAVRATPYGRRIQAKIQTYDNQ 583
>gi|85083831|ref|XP_957198.1| hypothetical protein NCU01775 [Neurospora crassa OR74A]
gi|18376126|emb|CAD21191.1| conserved hypothetical protein [Neurospora crassa]
gi|28918285|gb|EAA27962.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 677
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 177/327 (54%), Gaps = 18/327 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E C+ED
Sbjct: 271 IYTLCKDQHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNYLCQKLLELCSED 330
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + TS V+ +++ G+ +++K++ +V++ P ++L+++AL+ L+
Sbjct: 331 ERTVLIRNATSD---MVRIALNAHGTRALQKMIDSVSS-PAQINLIIEALRNRVVELIQD 386
Query: 220 KPGSSVVLQCLEQIYHHNNKND--FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL ++ N D FI+ A ++C+ + H GC + ID G ++
Sbjct: 387 LNGNHVIQKCLNKL----NATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDHADGAKKI 442
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ I+ NA +L ++ GNYVVQ++++L +P E + G LS K S VV+
Sbjct: 443 WLIERITANAVTLVQDPFGNYVVQYIIDLNEPSFTEPLVGQFLGRIPQLSKHKFSSNVVE 502
Query: 338 NCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
CL+ + + IV E +++ ++I ++ D YGNYV+QTAL + P+ H +LV
Sbjct: 503 KCLRCASPNSKDRIVSE-IMSQNEIKQLMQDSYGNYVVQTAL-DYATPSMKH---QLVEA 557
Query: 396 LQQNLDSLRFG-YGKHVYNFIKDCDLQ 421
++ +L ++R YG+ + I+ D Q
Sbjct: 558 IRPHLPAVRATPYGRRIQAKIQTYDNQ 584
>gi|242083470|ref|XP_002442160.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
gi|241942853|gb|EES15998.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
Length = 562
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 166/314 (52%), Gaps = 12/314 (3%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A+D+ G + LQ++L G R +D +F VS Q++ + + ++ K + C+ Q +
Sbjct: 252 IARDQHGCRLLQQRLDDG-KREVDHIFAGVSRHAAQLMVDPFGNYLMQKLLAVCDAGQRM 310
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+ L +T+ + V+ S++ G+ +++KL++++ R + LV+ AL+ F L+ G
Sbjct: 311 ALVLTLTADAFVLVRISLNVHGTRAVQKLIESLRTREEI-SLVIDALRPGFLELIKDPNG 369
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV +CL+ +NK I+ AA HCL + GC + I +G R +++
Sbjct: 370 NHVVQKCLQAFEADDNKA--IFDAAALHCLDIGMQCHGCCVLQRCIARSRGEHRDKLVAA 427
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ N L+++ GNYVVQ+V++L+ P ++ G YI LS+ K S VV+ CLK
Sbjct: 428 IAGNGFKLAQDAYGNYVVQYVIDLKIPNANSSLAQQFEGKYIHLSMQKFSSNVVEKCLKV 487
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNL 400
V+ I+ E +L + + ++ Y NYVI +AL + LH L ++ ++
Sbjct: 488 FKEVDKAKIILE-ILATPHLEQLLQHPYANYVIYSALQNSKG----SLHSALTNAIRPHV 542
Query: 401 DSLRFG-YGKHVYN 413
+ LR Y K +Y+
Sbjct: 543 ELLRTSPYCKRIYS 556
>gi|147858798|emb|CAN82911.1| hypothetical protein VITISV_015280 [Vitis vinifera]
Length = 773
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 153/295 (51%), Gaps = 15/295 (5%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I ++A+D+ G ++LQ G + + +FN + + +++ N + ++ K ++
Sbjct: 331 AQGHIYMIAKDQHGCRFLQRMFDEGTPQDVQIIFNEIIDHVVELMMNPFGNYLMQKLLDV 390
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
CNE+Q ++I + +T + V+ S++ G+ ++KL++ + R + V+ AL+ F
Sbjct: 391 CNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIETLKTRQQI-SRVISALEPGFLA 449
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKND-----------FIYQAALEHCLYLACHEQGCINM 264
L+ G+ V+ +CL+ + +NK + FI+ AA ++C+ +A H+ GC +
Sbjct: 450 LIKDLNGNHVIQRCLQCLSKEDNKEEMIGQLLTCTKKFIFVAAAKYCVEIATHQHGCCVL 509
Query: 265 NNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYI 324
I G R+ ++ IS N L+++ GNYVVQ +LEL+ P + G+Y+
Sbjct: 510 QRCISHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEGNYV 569
Query: 325 DLSLTKCGSFVVQNCLKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
LS + S VV+ CL N IV E LL++ ++ + NYVIQ AL
Sbjct: 570 HLSTQRFSSHVVEKCLTVCTEENQSRIVHE-LLSTSHFEQLLQHPHANYVIQKAL 623
>gi|115488632|ref|NP_001066803.1| Os12g0493900 [Oryza sativa Japonica Group]
gi|77555831|gb|ABA98627.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649310|dbj|BAF29822.1| Os12g0493900 [Oryza sativa Japonica Group]
gi|125579396|gb|EAZ20542.1| hypothetical protein OsJ_36154 [Oryza sativa Japonica Group]
Length = 520
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 170/313 (54%), Gaps = 10/313 (3%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A+D+ G ++LQ++L G R +D +F V+ +++ N + ++ K + C+++Q +
Sbjct: 210 IARDQHGCRFLQQRLDDG-KREVDFIFAGVARHAVELMVNPFGNYLMQKLLAVCDDEQRM 268
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
I L +T + V+ S++ G+ +++KL++++ R + LV++AL+ F L+ G
Sbjct: 269 AIVLTLTKDPFVLVRISLNVHGTRAVQKLIESLRTREEI-QLVVQALRPGFLELIKDPNG 327
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV +CL+ ++NK I++AA HCL + GC + I G +R++++
Sbjct: 328 NHVVQRCLQSFDANDNKP--IFEAAAVHCLDIGMQCHGCCVLQRCIARSGGEQREKLVAA 385
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK- 341
I+ N L+++ GNYVVQ+V++L+ P ++ +G YI LS+ K S VV+ CLK
Sbjct: 386 IASNGFELAQDAYGNYVVQYVIDLKVPTANASLTKQFQGRYIHLSMQKFSSNVVEKCLKV 445
Query: 342 YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLD 401
++ + LL ++ + NYVI +A+ + + LH L ++ +++
Sbjct: 446 FKEADKATIILELLAVPHFEQLLQHPFANYVIYSAI----QNSKGSLHSALTNAIRPHVE 501
Query: 402 SLRFG-YGKHVYN 413
LR Y K +Y+
Sbjct: 502 LLRTSPYCKRIYS 514
>gi|224063219|ref|XP_002301047.1| predicted protein [Populus trichocarpa]
gi|222842773|gb|EEE80320.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 162/298 (54%), Gaps = 16/298 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ L+AQD+ G +LQ+ G S+ ++ +F+ + +++ + +V K ++ C+E
Sbjct: 15 VYLMAQDQNGCLFLQKIFEEGTSQDVELIFDEIIGHIVELMLKPFGNYVVQKLLDVCDEK 74
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
L I IT++ + V+ ++ +G+ +++L++ + R + +++ ALK L+
Sbjct: 75 HRLLIVRMITNEPGMLVRICLNTYGTRVVQRLIETLKTRQQISSVIL-ALKPGVLDLVKD 133
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ +CL + + +NK FI+ AA + C+ +A H GC M I G ++
Sbjct: 134 QNGNHVIQRCLNLLSNEDNK--FIFDAATKFCVEIATHRHGCCVMQRCIAHATGKHWDKL 191
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS N L+++ GNYVVQ++++L++ I + +G+Y+ LS+ K GS VV+ C
Sbjct: 192 MTEISRNGLLLAQDPFGNYVVQYIMDLKNSCSIAILLSQFKGNYVHLSMQKFGSHVVERC 251
Query: 340 L-KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRPNS 385
L + + + IV E LL+ + ++ D + NYVIQ A L+E +RP+S
Sbjct: 252 LGHFEESRSQIVLE-LLSVPRFEQLLQDPFANYVIQCALAVTKGALHSLLVEAVRPHS 308
>gi|407917960|gb|EKG11259.1| hypothetical protein MPH_11603 [Macrophomina phaseolina MS6]
Length = 1088
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 172/323 (53%), Gaps = 14/323 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ L +D+ G +YLQ+++ + + K+F + ++ + +A ++ K E CN++
Sbjct: 669 IVELCKDQHGCRYLQKQIEGRNLDIVRKIFEATKDHVVDLMQDPFANYLCQKMYEFCNDE 728
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q V+ ++++ G+ +++K+++ V+ ++++++AL+ L+
Sbjct: 729 QRTALVHNAAPQ---MVKIALNQHGTRALQKMIEYVSTAE-QINIIIEALRHNVVTLIQD 784
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + +++ FI++A C+ + H GC + ID G +R +
Sbjct: 785 LNGNHVIQKCLNHLGSKDSQ--FIFEAVGAACIVVGTHRHGCCVLQRCIDHASGDQRIAL 842
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA SL ++ GNYVVQ++L+L++ +C + RG+ LS K S VV+ C
Sbjct: 843 IGAITANAYSLVQDPFGNYVVQYILDLQEEQFTIPMCNAFRGNVPMLSKQKFSSNVVEKC 902
Query: 340 LKYR--ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
++ T ++EE L+ ++ ++ D Y NYV+QT+L P + RLV ++
Sbjct: 903 IRVSNAETRRNLIEELLI-PGELEKLIRDSYANYVVQTSLDYADAPTKI----RLVEAIR 957
Query: 398 QNLDSLR-FGYGKHVYNFIKDCD 419
L ++R YG+ + + I+D D
Sbjct: 958 PMLSAIRTTPYGRRIMSKIQDFD 980
>gi|22330712|ref|NP_177940.2| pumilio 7 [Arabidopsis thaliana]
gi|313471413|sp|Q9C9R6.2|PUM7_ARATH RecName: Full=Putative pumilio homolog 7, chloroplastic;
Short=APUM-7; Short=AtPUM7; Flags: Precursor
gi|332197954|gb|AEE36075.1| pumilio 7 [Arabidopsis thaliana]
Length = 650
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 152/294 (51%), Gaps = 7/294 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ L+A+D+ G ++LQ G S +FN V +++ + + ++ K ++ C E+
Sbjct: 338 VYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEE 397
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I L T + ++ S++ +G+ +++L++ + + + LV AL+ F L+
Sbjct: 398 QRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGK-QISLVKLALRPGFLDLIKD 456
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+ + +NK FI+ AA + C +A H GC + I +R+++
Sbjct: 457 LNGNHVIQRCLQCLSTEDNK--FIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKL 514
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS N+ L+++ GNY VQ V+EL P + + L+GHY+ LS+ K S +V+ C
Sbjct: 515 IAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERC 574
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
L + + L++ ++ D Y N+VIQ AL T P LH LV
Sbjct: 575 LMHCPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAATKGP----LHASLV 624
>gi|242808102|ref|XP_002485093.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218715718|gb|EED15140.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1029
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 153/299 (51%), Gaps = 30/299 (10%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL + + +F +++ + + ++ K +E N+DQ
Sbjct: 590 LCKDQHGCRYLQRKLEERNPEHVQMIFAETHMHVVELMTDPFGNYLCQKLLEYSNDDQRT 649
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R+ Q V ++++ G+ +++K+++ V+ P + +V+ AL+ L+ G
Sbjct: 650 RLIHNAAPQ---LVPIALNQHGTRALQKMIEFVST-PQQIQMVIDALRGHVVDLVQDLNG 705
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A HC+ + H GC + ID G +R +++
Sbjct: 706 NHVIQKCLNRLSAEDAQ--FIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLIAQ 763
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ NA SL ++ GNYVVQ++L+L +P+ E +C S G+ LS K S V++ CL+
Sbjct: 764 ITSNAFSLVQDPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSKQKFSSNVIEKCLR- 822
Query: 343 RITVNY-----IVEEFLLNS--DQIFRVACDKYGNYVIQTAL-----------IETMRP 383
T Y +++E L+ D + R D Y NYV+QTA+ IE +RP
Sbjct: 823 --TAEYPMRRRMIDEILVPRELDAMLR---DSYANYVVQTAMDFADADNRNRIIEAVRP 876
>gi|242808097|ref|XP_002485092.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218715717|gb|EED15139.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1001
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 153/299 (51%), Gaps = 30/299 (10%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL + + +F +++ + + ++ K +E N+DQ
Sbjct: 590 LCKDQHGCRYLQRKLEERNPEHVQMIFAETHMHVVELMTDPFGNYLCQKLLEYSNDDQRT 649
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R+ Q V ++++ G+ +++K+++ V+ P + +V+ AL+ L+ G
Sbjct: 650 RLIHNAAPQ---LVPIALNQHGTRALQKMIEFVST-PQQIQMVIDALRGHVVDLVQDLNG 705
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A HC+ + H GC + ID G +R +++
Sbjct: 706 NHVIQKCLNRLSAEDAQ--FIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLIAQ 763
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ NA SL ++ GNYVVQ++L+L +P+ E +C S G+ LS K S V++ CL+
Sbjct: 764 ITSNAFSLVQDPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSKQKFSSNVIEKCLR- 822
Query: 343 RITVNY-----IVEEFLLNS--DQIFRVACDKYGNYVIQTAL-----------IETMRP 383
T Y +++E L+ D + R D Y NYV+QTA+ IE +RP
Sbjct: 823 --TAEYPMRRRMIDEILVPRELDAMLR---DSYANYVVQTAMDFADADNRNRIIEAVRP 876
>gi|328866633|gb|EGG15016.1| hypothetical protein DFA_09838 [Dictyostelium fasciculatum]
Length = 1352
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 169/323 (52%), Gaps = 16/323 (4%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
S I L +D+ G ++LQ+KL GD + +F V E+ +++ + + ++ K +E CN
Sbjct: 1033 SSIYPLCRDQHGCRFLQKKLEEGDEPLTELIFKEVCEYMLELMTDPFGNYLCQKLLEHCN 1092
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
+ Q L I ++ V+ S++ G+ +++K+++ + P + L+ K+L + L+
Sbjct: 1093 DRQRLVIIDKVGPD---IVRISMNMHGTRAVQKMIEFLTT-PEQIALIKKSLAQHVVPLI 1148
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQA--ALEHCLYLACHEQGCINMNNFIDEMKGPR 275
G+ V+ +CL ++ +N+ FIY + + +C+ +A H GC + ID +
Sbjct: 1149 QDLNGNHVIQKCLNKLAPPDNQ--FIYDSVSSSANCIAVATHRHGCCVLQRCIDHASETQ 1206
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ Q++ + N+ L ++ GNYVVQ+VL+L P L + GH L+ K S V
Sbjct: 1207 KVQLIQEVIANSLVLVQDPFGNYVVQYVLDLPFPGLTCEMAKRFVGHVSILATQKFSSNV 1266
Query: 336 VQNCLKYR--ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
V+ CL IT +++E L++ D + + D + NYVIQT+L P H H +LV
Sbjct: 1267 VEKCLHVADPITRGNLIQE-LIDCDTLLHLLQDPFANYVIQTSLT-IAEP---HQHTKLV 1321
Query: 394 TKLQQNLDSLR-FGYGKHVYNFI 415
++ +L L+ YGK + N I
Sbjct: 1322 EAIKPHLAQLKNTPYGKRIQNKI 1344
>gi|171689290|ref|XP_001909585.1| hypothetical protein [Podospora anserina S mat+]
gi|170944607|emb|CAP70718.1| unnamed protein product [Podospora anserina S mat+]
Length = 700
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 165/327 (50%), Gaps = 13/327 (3%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I LA+D+ G ++LQ++L + + ++ V +++ + + ++ K +E
Sbjct: 286 AEGNINSLARDQHGCRFLQKQLENRIPHEVHAIYREVLPHVHELMIDPFGNYLCQKLLEY 345
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
C +D+ + I + + V ++++ G+ +++K+++ V+N + ++ ALK
Sbjct: 346 CTDDERTEL---IKNSAKDMVPIALNQHGTRALQKMIEHVSNEV-QIQMITDALKMQVVT 401
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ V+ +CL ++ ++ FI+ A E+C+ + H GC + ID G +
Sbjct: 402 LIQDLNGNHVIQKCLNKLS--PEQSHFIFNAVGENCIDVGTHRHGCCVLQRCIDHANGQQ 459
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ ++ I+ NA L ++ GNYV+Q++++L +P E + R H + LS K S V
Sbjct: 460 KAWLIQCITNNAYRLVQDPFGNYVIQYIIDLNEPSFTEPLVAQFRTHILTLSKLKFSSNV 519
Query: 336 VQNCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
V+ CL+ + N IV E L +I R D Y NYV QTAL + QRLV
Sbjct: 520 VEKCLRCSSEQSKNMIVSELLDAGSEIERCLRDSYANYVYQTALDHGTN----DMKQRLV 575
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCD 419
++ +L S+R YG+ + I D
Sbjct: 576 DLIRPHLASIRNTPYGRRISAKISAFD 602
>gi|326496705|dbj|BAJ98379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 166/315 (52%), Gaps = 14/315 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A+D+ G ++LQ++L G R +D +F V+ ++ N + ++ K + C+E+Q +
Sbjct: 174 VARDQHGCRFLQQRLDDG-KREVDFIFTGVARHAVDLMVNPFGNYLMQKLLAVCSEEQRM 232
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
I L +T + + V+ S++ G+ +++KL++++ R + LV+ AL+ F L+ G
Sbjct: 233 GIVLTLTKEPFVLVRISLNVHGTRAVQKLIESLKAREEI-QLVVAALRPGFLELIKDPNG 291
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV +CL+ +NK I+ AA +CL + GC + I G +++++
Sbjct: 292 NHVVQKCLQSFGADDNKP--IFDAAAIYCLDIGMQCHGCCVLQRCIARSTGEHKEKLVAA 349
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ N L+++ GNYVVQ+V+EL+ ++ G YI LS+ K S VV+ CLK
Sbjct: 350 IARNGFELAQDAYGNYVVQYVIELKVAAANASLAQQFEGKYIHLSMQKFSSNVVEKCLKV 409
Query: 343 ---RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQN 399
N I++ LL + Q R+ Y NYV+ AL + + LH L ++ +
Sbjct: 410 FKEADKANIILQ--LLAAPQFERLLLHPYANYVVYAAL----QNSKGSLHSALTNAIRPH 463
Query: 400 LDSLRFG-YGKHVYN 413
++ LR Y K +Y+
Sbjct: 464 VELLRTSPYCKRIYS 478
>gi|66804327|ref|XP_635942.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
gi|60464289|gb|EAL62439.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
Length = 1036
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 167/323 (51%), Gaps = 16/323 (4%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
I L +D+ G ++LQ+KL D + + +F V ++ +++ + + ++ K +E CN
Sbjct: 714 GSIYPLCRDQHGCRFLQKKLEESDLQLTEIIFKEVCDYMLELMTDPFGNYLCQKLLEHCN 773
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
+ Q L I ++ + V+ S++ G+ +++K+++ + P + L+ ++LK L+
Sbjct: 774 DRQRLTIIEKVGTD---IVRISMNMHGTRAVQKMIEYLTT-PEQIQLIKRSLKDSVVPLI 829
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEH--CLYLACHEQGCINMNNFIDEMKGPR 275
G+ V+ +CL ++ +N+ FIY A C+ +A H GC + ID +
Sbjct: 830 QDLNGNHVIQKCLNKLSPQDNQ--FIYDAVSSDGSCIAVATHRHGCCVLQRCIDHASESQ 887
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ Q++ + N+ L ++ GNYVVQ+VL+L L + GH L+ K S V
Sbjct: 888 KLQLIQEVIANSLVLVQDPYGNYVVQYVLDLPFQGLATEMAKRFVGHVPILATQKFSSNV 947
Query: 336 VQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
V+ CL IT Y+++E +++ D + + D Y NYVIQT+L + H H +LV
Sbjct: 948 VEKCLHVADAITRGYLIQE-VIDYDNLLHLLQDPYANYVIQTSLTIS----EPHQHTKLV 1002
Query: 394 TKLQQNLDSLR-FGYGKHVYNFI 415
++ +L L+ YGK + N I
Sbjct: 1003 EAIRPHLPLLKNTPYGKRIQNKI 1025
>gi|224067236|ref|XP_002302423.1| predicted protein [Populus trichocarpa]
gi|222844149|gb|EEE81696.1| predicted protein [Populus trichocarpa]
Length = 486
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 145/281 (51%), Gaps = 8/281 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ LA+D+ G ++LQ + S +D +F V ++ +I + + +V K IE +E+
Sbjct: 189 IVALAKDQHGCKFLQRLIESATREQIDMLFYEVIDYVGGLIADPFGNYVVQKLIEVISEE 248
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R+ +T D V+ +D G+ +++KL+ + N P + LV+ AL + L+
Sbjct: 249 QRTRVLRMLTRTDFQLVRICLDVHGTRAVQKLLNCITN-PLQVSLVVSALNQGAVALIKD 307
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G V+ ++ +NK +I + E C +A ++ GC + ++ +G R ++
Sbjct: 308 SNGHHVIQHSMKHFSPQDNK--YILKQVAEKCFEIATNKSGCCVLQRCVEYSEGEHRDRL 365
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I NA L+ + GNYVVQH+L+L+ P + E + G Y+ LS K GS VV+ C
Sbjct: 366 VAEIIANALLLAEDHYGNYVVQHILDLKMPQITENLLTQFEGSYMALSCNKYGSNVVEKC 425
Query: 340 L---KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
L + I+E LL++ + D +GN+VIQ AL
Sbjct: 426 LLTTSEDQSTQIILE--LLSNPGASMLLVDPFGNFVIQKAL 464
>gi|212537853|ref|XP_002149082.1| RNA-binding protein, putative [Talaromyces marneffei ATCC 18224]
gi|210068824|gb|EEA22915.1| RNA-binding protein, putative [Talaromyces marneffei ATCC 18224]
Length = 1026
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 154/299 (51%), Gaps = 30/299 (10%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL ++ + +F +++ + + ++ K +E N+DQ
Sbjct: 617 LCKDQHGCRYLQRKLEERNADHVQMIFEETHMHVVELMTDPFGNYLCQKLLEYSNDDQRT 676
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R+ Q V ++++ G+ +++K+++ V+ P + +V+ AL+ L+ G
Sbjct: 677 RLIHNAAPQ---LVPIALNQHGTRALQKMIEFVST-PQQIRMVIDALRGHVVDLVQDLNG 732
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A HC+ + H GC + ID G +R +++
Sbjct: 733 NHVIQKCLNRLSAEDAQ--FIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLIAQ 790
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ NA SL ++ GNYVVQ++L+L +P+ + +C S G+ LS K S V++ CL+
Sbjct: 791 ITSNAFSLVQDPFGNYVVQYILDLSEPHFTDPLCQSFLGNIPALSKQKFSSNVIEKCLR- 849
Query: 343 RITVNY-----IVEEFLLNS--DQIFRVACDKYGNYVIQTAL-----------IETMRP 383
T Y +++E L+ D + R D Y NYV+QTA+ IE +RP
Sbjct: 850 --TAEYPMRCRMIDEILVPRELDAMLR---DSYANYVVQTAMDFADADNRNRIIEAVRP 903
>gi|452822083|gb|EME29106.1| serine rich Pumilio family RNA binding domain protein [Galdieria
sulphuraria]
Length = 848
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 166/319 (52%), Gaps = 13/319 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I LA+D+ G ++LQ KL G+ ++ + + +++ + + ++ K E CN
Sbjct: 531 IFELAKDQHGCRFLQMKLEEGNPAYIAMILAECFDGLPELMVDPFGNYLCQKLFECCNFQ 590
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L I LQ T + Q S++ G+ ++++++ + + V AL LM
Sbjct: 591 QRLSI-LQNTCS--VLAQVSMNMHGTRVVQRIIECMEGEDQI-STVCTALTPFASQLMKD 646
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+++ +N+ FI+ A + HC+ LA H GC + +D +++Q+
Sbjct: 647 VNGNHVIQRCLQKVAPTHNQ--FIFDAVVSHCVELATHRHGCCVIQRCLDYAIPLQKEQV 704
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
I NA +L ++ GNYVVQ+VL+L++ + I I L GH +LS+ K S VV+ C
Sbjct: 705 CMEICENAFTLVQDAFGNYVVQYVLDLKNRFYIAKIIAQLAGHLYELSVQKFSSNVVEKC 764
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L+ T +++ E + + + + R+ D YGNYV+Q AL P ++ ++
Sbjct: 765 LQQVDPETRKHLIYELMSDRELLGRLLHDAYGNYVVQRALQLAQSPQ----LEQFCEIIR 820
Query: 398 QNLDSLRFG-YGKHVYNFI 415
+L SL+ YGK +Y+ I
Sbjct: 821 PHLSSLKSTPYGKRIYSKI 839
>gi|356551678|ref|XP_003544201.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 622
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 156/281 (55%), Gaps = 9/281 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I LA+ + G ++LQ + G S + VFN V + +++ + + ++ K ++ +D
Sbjct: 310 IYYLAKHQNGCRFLQRMIDEGTSEHVLIVFNGVIDDVVELMVDPFGNYLVQKLLDVGGDD 369
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ L++ +T + ++ S++ G+ ++KL+ V +R + ++M A++ F L+
Sbjct: 370 ERLQVVSMLTKEPGQLIKTSLNIHGTRVVQKLITTVDSRKQIA-MLMSAIQSGFLALIKD 428
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+ Y N+FI+ AA + C+ +A H+ GC + ID G + ++
Sbjct: 429 LNGNHVIQRCLQ--YFSCKDNEFIFYAATKFCVEIATHQHGCCVLQRCIDYSTGKYQDKL 486
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I + L+++ GNYVVQ+++E+E+P + +G+Y +LS+ K S VV+ C
Sbjct: 487 VKEICRHGLLLAQDPFGNYVVQYIIEMENPTASFKLHSQFKGNYTNLSMQKYSSHVVEKC 546
Query: 340 LKYRITV-NYIVEEFLL--NSDQIFRVACDKYGNYVIQTAL 377
L + + + IV+EFL + +Q+ + D YGNYV+Q AL
Sbjct: 547 LVHLAEIKSRIVQEFLSFPHFEQLLQ---DLYGNYVVQRAL 584
>gi|367054818|ref|XP_003657787.1| hypothetical protein THITE_2123815 [Thielavia terrestris NRRL 8126]
gi|347005053|gb|AEO71451.1| hypothetical protein THITE_2123815 [Thielavia terrestris NRRL 8126]
Length = 1029
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 174/325 (53%), Gaps = 14/325 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ++L + + ++ ++ +++ + + ++ K +E CN+D
Sbjct: 612 IYSLCKDQHGCRYLQKQLENRIPEQIHMIWLETNQHVVELMTDPFGNYLCQKLLEYCNDD 671
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + +Q S D V+ ++++ G+ +++K+++ V P ++L+++AL+ L+
Sbjct: 672 ERT-VLIQNASSD--LVRIALNQHGTRALQKMIEHVTT-PVQINLIVEALRNQVVELIQD 727
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + FI+ A +HC+ + H GC + ID G ++ +
Sbjct: 728 LNGNHVIQKCLNKLSAADAS--FIFDAVGKHCVEVGTHRHGCCVLQRCIDHADGAQKVWL 785
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ +A +L ++ GNYVVQ+V++L + E + + LS K S VV+ C
Sbjct: 786 IERITAHAVTLVQDPFGNYVVQYVIDLNEETFTEPLVQQFQNRIAALSKHKFSSNVVEKC 845
Query: 340 LK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L+ + + IV E LL +I R+ D +GNYVIQTAL + P S H RLV ++
Sbjct: 846 LRCASEQSRDMIVSE-LLAPGEIERLLRDSFGNYVIQTAL-DYSTPMSKH---RLVEAIR 900
Query: 398 QNLDSLRF-GYGKHVYNFIKDCDLQ 421
NL S+R YG+ + I+ D +
Sbjct: 901 PNLPSIRATPYGRRIQAKIQAYDAR 925
>gi|145354443|ref|XP_001421494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581731|gb|ABO99787.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 326
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 172/330 (52%), Gaps = 23/330 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +LA+D+ G ++LQ K ++ +D ++ + +++ + + ++ K IE C+++
Sbjct: 3 ISVLARDQHGCRFLQRKFDEEGAKAVDLCYDEIIAEAVELMMDPFGNYLVQKLIECCSDE 62
Query: 160 Q---LLRITLQITSQDQL-----FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKR 211
Q +LR + + D L V +++ G+ +++KL++ + N P + L AL+
Sbjct: 63 QRSGVLR-AVSVVKDDSLDGLPELVTIALNTHGTRAVQKLIEML-NSPEEVSLATNALRP 120
Query: 212 LFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEM 271
L+ G+ V+ +CL+++ +N+ FIY AA HC+ +A H GC + ID
Sbjct: 121 GVVTLIKDLNGNHVIQRCLQRLSSEDNQ--FIYDAAKVHCVEIATHRHGCCVLQRCIDHA 178
Query: 272 KGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
+R+ ++ I+ A LS++ GNYVVQ++L+L + + L G+Y +LS+ K
Sbjct: 179 IDEQRRPLVLEIASQALVLSQDPFGNYVVQYILDLGLSWANGEVMTQLLGNYAELSMQKF 238
Query: 332 GSFVVQNCLK-----YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
S VV+ CLK N +V E ++ S + R+ D YGNYV+Q+ L T
Sbjct: 239 SSNVVEKCLKLADASLEKNRNTVVRE-IMQSPLLDRLLMDPYGNYVVQSTLTVTKGV--- 294
Query: 387 HLHQRLVTKLQQNLDSLRFG-YGKHVYNFI 415
LH LV +++ +L ++ +GK + +
Sbjct: 295 -LHTELVERIRPHLPLIKNSPFGKRILRLL 323
>gi|308812071|ref|XP_003083343.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) (ISS) [Ostreococcus tauri]
gi|116055223|emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) (ISS) [Ostreococcus tauri]
Length = 340
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 174/329 (52%), Gaps = 21/329 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +LA+D+ G ++LQ K S+ +D ++ + +++ + + ++ K IE C+++
Sbjct: 15 ISVLARDQHGCRFLQRKFDEEGSKAVDLCYDEIIAEAVELMMDPFGNYLVQKLIECCSDE 74
Query: 160 Q---LLRIT--LQITSQDQL--FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL 212
Q +LR ++ + D L V +++ G+ +++KL++ + N P + L AL+
Sbjct: 75 QRSGVLRAVSVVKADNPDGLPELVTIALNTHGTRAVQKLIEML-NSPEEVSLATTALRPG 133
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
L+ G+ V+ +CL+++ +N+ FIY AA HC+ +A H GC + ID
Sbjct: 134 VVTLIKDLNGNHVIQRCLQRLSCDDNQ--FIYDAAKVHCVEIATHRHGCCVLQRCIDHAT 191
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+R+ +++ I+ A LS++ GNYVVQ++L+L + + L G+Y +LS+ K
Sbjct: 192 EEQRRPLVHEIASQALVLSQDPFGNYVVQYILDLGLSWANGEVMTQLLGNYAELSMQKFS 251
Query: 333 SFVVQNCLK-----YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CLK N +V E ++ S + R+ D YGNYV+Q+ L T
Sbjct: 252 SNVVEKCLKLADASLEKNRNTVVRE-IMQSPLLDRLLMDPYGNYVVQSTLTVTKGV---- 306
Query: 388 LHQRLVTKLQQNLDSLRFG-YGKHVYNFI 415
LH LV +++ +L ++ +GK + +
Sbjct: 307 LHTELVERIRPHLPLIKNSPFGKRILRLL 335
>gi|336272059|ref|XP_003350787.1| hypothetical protein SMAC_12592 [Sordaria macrospora k-hell]
gi|380094950|emb|CCC07452.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 670
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 175/325 (53%), Gaps = 14/325 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E C+ED
Sbjct: 247 IYTLCKDQHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNYLCQKLLELCSED 306
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ T+ I + V+ +++ G+ +++K++ +V++ P ++L+++AL+ L+
Sbjct: 307 ER---TVLIRNATPDMVRIALNAHGTRALQKMIDSVSS-PVQINLIIEALRNRVVELIQD 362
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ FI+ A ++C+ + H GC + ID G ++ +
Sbjct: 363 LNGNHVIQKCLNKL--DATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDHADGSKKIWL 420
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA +L ++ GNYVVQ++++L +P E + G LS K S VV+ C
Sbjct: 421 IERITANAVTLVQDPFGNYVVQYIIDLNEPSFTEPLVRQFLGRIPQLSKHKFSSNVVEKC 480
Query: 340 LKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L+ + + IV E +++ ++I ++ D YGNYV+QTAL + P H +LV ++
Sbjct: 481 LRCASPNSKDMIVSE-IMSQNEIKQLMQDSYGNYVVQTAL-DYATPGMKH---QLVEAIR 535
Query: 398 QNLDSLRFG-YGKHVYNFIKDCDLQ 421
+L ++R YG+ + ++ D Q
Sbjct: 536 PHLPAVRATPYGRRIQAKVQTYDNQ 560
>gi|12324246|gb|AAG52093.1|AC012680_4 putative RNA-binding protein; 42664-44784 [Arabidopsis thaliana]
Length = 626
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 147/281 (52%), Gaps = 3/281 (1%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ L+A+D+ G ++LQ G S +FN V +++ + + ++ K ++ C E+
Sbjct: 338 VYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEE 397
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I L T + ++ S++ +G+ +++L++ + + + LV AL+ F L+
Sbjct: 398 QRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGK-QISLVKLALRPGFLDLIKD 456
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+ + +NK FI+ AA + C +A H GC + I +R+++
Sbjct: 457 LNGNHVIQRCLQCLSTEDNK--FIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKL 514
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS N+ L+++ GNY VQ V+EL P + + L+GHY+ LS+ K S +V+ C
Sbjct: 515 IAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERC 574
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIET 380
L + + L++ ++ D Y N+VIQ AL T
Sbjct: 575 LMHCPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAAT 615
>gi|195635993|gb|ACG37465.1| maternal protein pumilio [Zea mays]
Length = 479
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 168/320 (52%), Gaps = 14/320 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A+D+ G + LQ++L G R +D +F VS Q++ + + ++ K + C++ Q +
Sbjct: 169 MARDQHGCRLLQQRLDDG-KREVDYIFAGVSRHAAQLMVDPFGNYLMQKLLAVCDDGQRM 227
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+ L +T+ V+ S++ G+ +++KL++ ++ R + LVM AL+ F L+ G
Sbjct: 228 TLVLTLTADPFALVRISLNVHGTRAVQKLIERLSAREEI-GLVMDALRPGFLELIKDTNG 286
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV +CL +N N I+ AA HC+ + GC + I +G R +++
Sbjct: 287 NHVVQKCLHSFA--SNDNKAIFAAAALHCVDIGMQIHGCCVLQRCIARSRGEHRDKLVAA 344
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ N L+++ GNYVVQ VL+L+ P ++ G YI LS+ K S VV+ CLK
Sbjct: 345 IAHNGFKLAQDAYGNYVVQVVLDLKIPTANSSLAQQFGGKYIHLSMQKFSSNVVEKCLKV 404
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNL 400
V+ I+ E LL + + ++ Y NYV+ +AL + + LH L+ + +
Sbjct: 405 FKEVDKAKIILE-LLATPHLEQLLPHCYANYVVYSAL----KNSKGSLHSALINAILPHE 459
Query: 401 DSLRFG-YGKHVYN--FIKD 417
+ LR Y K +Y+ F+K+
Sbjct: 460 ELLRTSPYCKRIYSKFFLKN 479
>gi|212275350|ref|NP_001130994.1| uncharacterized protein LOC100192099 [Zea mays]
gi|194690654|gb|ACF79411.1| unknown [Zea mays]
gi|413916502|gb|AFW56434.1| maternal protein pumilio [Zea mays]
Length = 479
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 167/320 (52%), Gaps = 14/320 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A+D+ G + LQ++L G R +D +F VS Q++ + + ++ K + C++ Q +
Sbjct: 169 MARDQHGCRLLQQRLDDG-KREVDYIFAGVSRHAAQLMVDPFGNYLMQKLLAVCDDGQRM 227
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+ L +T+ V+ S++ G+ +++KL++ ++ R + LVM AL+ F L+ G
Sbjct: 228 TLVLTLTADPFALVRISLNVHGTRAVQKLIERLSAREEI-GLVMDALRPGFLELIKDTNG 286
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV +CL +N N I+ AA HC+ + GC + I +G R +++
Sbjct: 287 NHVVQKCLHSFA--SNDNKAIFAAAALHCVDIGMQIHGCCVLQRCIARSRGEHRDKLVAA 344
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ N L+ + GNYVVQ VL+L+ P ++ G YI LS+ K S VV+ CLK
Sbjct: 345 IAHNGFKLAEDAYGNYVVQVVLDLKIPTANSSLAQQFGGKYIHLSMQKFSSNVVEKCLKV 404
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNL 400
V+ I+ E LL + + ++ Y NYV+ +AL + + LH L+ + +
Sbjct: 405 FKEVDKAKIILE-LLATPHLEQLLPHCYANYVVYSAL----KNSKGSLHSALINAILPHE 459
Query: 401 DSLRFG-YGKHVYN--FIKD 417
+ LR Y K +Y+ F+K+
Sbjct: 460 ELLRTSPYCKRIYSKFFLKN 479
>gi|400597533|gb|EJP65263.1| pumilio domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1043
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 179/327 (54%), Gaps = 18/327 (5%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
S I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN
Sbjct: 622 SQIYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCN 681
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
+D+ + +Q SQD V+ ++++ G+ +++K+++ V N P + L+++AL+ FR++
Sbjct: 682 DDERT-VLIQNASQD--MVRIALNQHGTRALQKMIEYV-NTPQQVHLIIEALR--FRVVE 735
Query: 218 MTKP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
+ + G+ V+ +CL ++ + + FI+ A +C+ + H GC + ID G +
Sbjct: 736 LIQDLNGNHVIQKCLNKLTSLDAQ--FIFDAVGNNCIEVGTHRHGCCVLQRCIDHASGDQ 793
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++ ++ I+ +A L ++ GNYVVQ++++L +P E + + +G LS K S V
Sbjct: 794 KQWLVARITAHARILVQDPFGNYVVQYIIDLNEPTFTEPVVATFQGCIGQLSRHKFSSNV 853
Query: 336 VQNCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
++ CL+ + + IVEE L+ ++ I R+ D + NYVIQTAL E P L RLV
Sbjct: 854 IEKCLRCAQPPSKDMIVEEMLVPAE-IERLLRDSFANYVIQTAL-EFATP---QLKYRLV 908
Query: 394 TKLQQNLDSLRFG-YGKHVYNFIKDCD 419
++ L +R YG+ + I D
Sbjct: 909 EAIRPILPQIRTTPYGRRIQAKISAYD 935
>gi|346323846|gb|EGX93444.1| RNA-binding protein, putative [Cordyceps militaris CM01]
Length = 1060
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 179/327 (54%), Gaps = 18/327 (5%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
S I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN
Sbjct: 636 SQIYDLCKDQHGCRYLQKKLEERNPEQVHMIWFETNQHVIELMTDPFGNYLCQKLLEFCN 695
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
+D+ + +Q SQD V+ ++++ G+ +++K+++ V N P + L+++AL+ FR++
Sbjct: 696 DDERT-VLIQNASQD--MVRIALNQHGTRALQKMIEYV-NTPQQVHLIIEALR--FRVVE 749
Query: 218 MTKP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
+ + G+ V+ +CL ++ + + FI+ A +C+ + H GC + ID G +
Sbjct: 750 LIQDLNGNHVIQKCLNKLTSLDAQ--FIFDAVGNNCIEVGTHRHGCCVLQRCIDHASGDQ 807
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++ ++ I+ +A L ++ GNYVVQ++++L +P E + + +G LS K S V
Sbjct: 808 KQWLVARITAHARILVQDPFGNYVVQYIIDLNEPTFTEPVVATFQGCIGQLSRHKFSSNV 867
Query: 336 VQNCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
++ CL+ + + IVEE +L + +I R+ D + NYVIQTAL E P L RLV
Sbjct: 868 IEKCLRCAQPPSRDMIVEE-MLAAPEIERLLRDSFANYVIQTAL-EFATP---QLKYRLV 922
Query: 394 TKLQQNLDSLRFG-YGKHVYNFIKDCD 419
++ L +R YG+ + I D
Sbjct: 923 EAIRPVLPQIRTTPYGRRIQAKISAYD 949
>gi|7267527|emb|CAB78009.1| putative protein [Arabidopsis thaliana]
gi|7321073|emb|CAB82120.1| putative protein [Arabidopsis thaliana]
Length = 524
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 157/284 (55%), Gaps = 11/284 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ L+A+D+ G + LQ+ + G+ + +F V ++ + + ++ K IE CNE+
Sbjct: 246 VYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCNEE 305
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I +++TS+ L V+ S++ +G+ ++KL++ V + + LV AL F L
Sbjct: 306 QRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQ-ISLVKSALVPGFLSLFRE 364
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+L CL+ + N N FI +AA + C+ +A GC + + G + +++
Sbjct: 365 LNGNHVILNCLK--FFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKL 422
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS N+ L+++ GNY+VQ+++E + + + F LRG+Y+ L+ K GS VV+ C
Sbjct: 423 VDEISRNSLLLAQDPFGNYLVQYIIEKKVGGV--NVLFELRGNYVKLATQKFGSHVVEKC 480
Query: 340 LKYRI-TVNYIVEEF--LLNSDQIFRVACDKYGNYVIQTALIET 380
L+Y + + IV E +LN + + D Y NYVIQ AL +T
Sbjct: 481 LRYYPESRSQIVNELVSVLNFGYLLQ---DPYANYVIQCALSKT 521
>gi|449452777|ref|XP_004144135.1| PREDICTED: uncharacterized protein LOC101212397 [Cucumis sativus]
Length = 746
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 158/322 (49%), Gaps = 10/322 (3%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I L+A+D+ G ++LQ + G ++ +F + +++ + + ++ K +
Sbjct: 421 ATGKIYLMAKDQHGCRFLQRMFSEGTKEDIEMIFGEIIHHVSELMVDPFGNYLIQKLLGV 480
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
C+EDQ L+I +I +L ++ S + G+ +++KL++ + P L++ LK +
Sbjct: 481 CDEDQRLQILYKINRPGEL-IRISCNMHGTRAVQKLIETLKT-PEQFSLIVSLLKTGIVI 538
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
LM G+ V CL Q + F++ AA + C+ +A GC + +
Sbjct: 539 LMKNVNGNHVAQHCL-QYLMPDYIGKFLFDAATKSCVEVATDRHGCCVLQKCLAVSDARH 597
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELED-----PYLIETICFSLRGHYIDLSLTK 330
R ++L + NA LS++ GNYVVQ LEL P++ I L GH+ DLS+ K
Sbjct: 598 RDRLLSEVVRNALVLSQDQYGNYVVQFALELARCPSILPWVTSGIFKRLEGHFSDLSIQK 657
Query: 331 CGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
S VV+ C+ V + L+N ++ ++ + YGNY +Q L + S +H
Sbjct: 658 YSSNVVERCVYAGDEYLAKVVDELINDERFSQIMLNPYGNYAVQAVLARSGICKS-SVHA 716
Query: 391 RLVTKLQQNLDSLRFG-YGKHV 411
+LV ++ ++ LR YGK V
Sbjct: 717 KLVAAIRPHVPLLRTNMYGKKV 738
>gi|186511600|ref|NP_192624.2| pumilio 11 [Arabidopsis thaliana]
gi|313471422|sp|Q9LDW3.2|PUM11_ARATH RecName: Full=Pumilio homolog 11; Short=APUM-11; Short=AtPUM11
gi|332657281|gb|AEE82681.1| pumilio 11 [Arabidopsis thaliana]
Length = 556
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 157/284 (55%), Gaps = 11/284 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ L+A+D+ G + LQ+ + G+ + +F V ++ + + ++ K IE CNE+
Sbjct: 246 VYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCNEE 305
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I +++TS+ L V+ S++ +G+ ++KL++ V + + LV AL F L
Sbjct: 306 QRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQ-ISLVKSALVPGFLSLFRE 364
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+L CL+ + N N FI +AA + C+ +A GC + + G + +++
Sbjct: 365 LNGNHVILNCLK--FFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKL 422
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS N+ L+++ GNY+VQ+++E + + + F LRG+Y+ L+ K GS VV+ C
Sbjct: 423 VDEISRNSLLLAQDPFGNYLVQYIIEKKVGGV--NVLFELRGNYVKLATQKFGSHVVEKC 480
Query: 340 LKYRI-TVNYIVEEF--LLNSDQIFRVACDKYGNYVIQTALIET 380
L+Y + + IV E +LN + + D Y NYVIQ AL +T
Sbjct: 481 LRYYPESRSQIVNELVSVLNFGYLLQ---DPYANYVIQCALSKT 521
>gi|449493600|ref|XP_004159369.1| PREDICTED: uncharacterized LOC101212397 [Cucumis sativus]
Length = 746
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 158/322 (49%), Gaps = 10/322 (3%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I L+A+D+ G ++LQ + G ++ +F + +++ + + ++ K +
Sbjct: 421 ATGKIYLMAKDQHGCRFLQRMFSEGTKEDIEMIFGEIIHHVSELMVDPFGNYLIQKLLGV 480
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
C+EDQ L+I +I +L ++ S + G+ +++KL++ + P L++ LK +
Sbjct: 481 CDEDQRLQILYKINRPGEL-IRISCNMHGTRAVQKLIETLKT-PEQFSLIVSLLKTGIVI 538
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
LM G+ V CL Q + F++ AA + C+ +A GC + +
Sbjct: 539 LMKNVNGNHVAQHCL-QYLMPDYIGKFLFDAATKSCVEVATDRHGCCVLQKCLAVSDARH 597
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELED-----PYLIETICFSLRGHYIDLSLTK 330
R ++L + NA LS++ GNYVVQ LEL P++ I L GH+ DLS+ K
Sbjct: 598 RDRLLSEVVRNALVLSQDQYGNYVVQFALELARCPSILPWVTSGIFKRLEGHFSDLSIQK 657
Query: 331 CGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
S VV+ C+ V + L+N ++ ++ + YGNY +Q L + S +H
Sbjct: 658 YSSNVVERCVYAGDEYLAKVVDELINDERFSQIMLNPYGNYAVQAVLARSGICKS-SVHA 716
Query: 391 RLVTKLQQNLDSLRFG-YGKHV 411
+LV ++ ++ LR YGK V
Sbjct: 717 KLVAAIRPHVPLLRTNMYGKKV 738
>gi|224136880|ref|XP_002326968.1| predicted protein [Populus trichocarpa]
gi|222835283|gb|EEE73718.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 160/316 (50%), Gaps = 13/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ LA+D G ++LQ+ + S +D +F V + +I + + +V K +E +E+
Sbjct: 190 VVALAKDPYGCKFLQKLIESATREQIDMLFYEVIGYVGGLIVDPFGNYVVQKLVEVLSEE 249
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q I +T D V+ +D G+ ++KL+ + N P + +V+ AL + L+
Sbjct: 250 QRTGILRMLTRTDFQLVRICLDVHGTRVVQKLLNCITN-PQQVSIVVSALSQGAVALITD 308
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G V+ + +NK +I + E+C +A ++ GC + ++ +G R ++
Sbjct: 309 SNGHHVIQHFFKHFSTEDNK--YILKQVAENCFGIATNKSGCCVLQRCVEYSEGEARDRL 366
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I NA L+ + GNYVVQH+L+L+ P + E + +G Y+ LS K GS VV++C
Sbjct: 367 LAEIIANALLLAEDHYGNYVVQHILKLKSPEITENLLAQFKGSYMALSCNKYGSNVVESC 426
Query: 340 L---KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
L + + I+E LL + + + D +GN+VIQ AL + + + LV +
Sbjct: 427 LLTTREEQSTQIILE--LLRNPLVSMLLVDPFGNFVIQKALSISQG----QVQRYLVALI 480
Query: 397 QQNLDSLRFG-YGKHV 411
Q+N +R YG+ V
Sbjct: 481 QRNAQKMRSNIYGQKV 496
>gi|359492558|ref|XP_003634432.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Vitis
vinifera]
Length = 574
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 167/328 (50%), Gaps = 14/328 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDS-RFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNE 158
++ LA ++ G ++LQEKL + + + ++ +F+ V Q++ +Q+ +V K +E CNE
Sbjct: 253 VVPLAMNQHGCRFLQEKLQNNVTVKEIEMIFSEVIHHVAQLMLDQFGNYVVQKLVEICNE 312
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
+Q +I L T+ + ++ G+ ++KL++ + P + + M AL + L
Sbjct: 313 EQRTQILLSATTNQYQLIFICLNMHGTRVMQKLLEYLTT-PEQISIAMSALWPVTVALTK 371
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
G V+ CL+ +N ++ + E+C +A + GC + + ++ +G R+Q
Sbjct: 372 DTSGHHVIQHCLKLFSCQDNM--YLIKEVAENCFEIATNRSGCCVLQSCVENSQGELREQ 429
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
++ I NA L+ + GNYVVQH++ L+ P +I + G +I LS K GS VV+
Sbjct: 430 LMAEIIANALPLAEDRYGNYVVQHLMGLKIPEVITNLLKQFEGTFISLSCNKYGSNVVEK 489
Query: 339 CL---KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
L K + I+E LL S + + D +GN+VIQ+AL + H+ LV
Sbjct: 490 FLIESKDEQSSQIIIE--LLRSPNVSMLLLDPFGNFVIQSAL----SVSKGHIRNALVNL 543
Query: 396 LQQNLDSLRFG-YGKHVYNFIKDCDLQN 422
++ + S+R YGK V + LQ+
Sbjct: 544 VRLHAPSMRSNLYGKKVLTWFDKRKLQH 571
>gi|396458556|ref|XP_003833891.1| similar to mRNA binding protein Pumilio 2 [Leptosphaeria maculans
JN3]
gi|312210439|emb|CBX90526.1| similar to mRNA binding protein Pumilio 2 [Leptosphaeria maculans
JN3]
Length = 1025
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 169/320 (52%), Gaps = 12/320 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL + + +F + +++ + + ++ K +E CN++
Sbjct: 618 IYTLCKDQHGCRFLQKKLEDRNHEHIQIIFEETNPHVVELMTDPFGNYLCQKLLEFCNDE 677
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R TL + + V ++++ G+ +++K+++ ++ ++++AL L+
Sbjct: 678 Q--RNTL-VRNASPAMVSIALNQHGTRALQKMIEYISTED-QTQMIIQALSGQVVDLIQD 733
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + ++ FI+ A EHC+ + H GC + ID G ++ +
Sbjct: 734 LNGNHVIQKCLNHL--KPSEAQFIFDAVGEHCVTVGTHRHGCCVLQRCIDHAAGYQKIDL 791
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
++ I+ NA SL ++ GNYVVQ++L+L D +C S G +LS K S V++ C
Sbjct: 792 VHRITQNAFSLVQDPFGNYVVQYILDLNDENFTTPMCKSFEGRVPELSKQKFSSNVIEKC 851
Query: 340 LK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
++ + ++ + LL+ ++ + D+YGNYVIQTAL P L LH L+ ++
Sbjct: 852 IRCANMDAKAMMIQELLDMVELEMLMRDQYGNYVIQTAL--EFAPGELALH--LIESMRP 907
Query: 399 NLDSLRFG-YGKHVYNFIKD 417
L ++R YG+ + +++
Sbjct: 908 ILPTIRATPYGRRIMAKVQE 927
>gi|239613522|gb|EEQ90509.1| RNA-binding protein [Ajellomyces dermatitidis ER-3]
Length = 1122
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 189/390 (48%), Gaps = 45/390 (11%)
Query: 9 VSETQLNNLSLSFENLQVNDPSYSSFNEIHPSPPVPLYPQSTWAVPSLSGRSTVPNLSGT 68
S Q N + +F+ +P Y S+ P P +P+S P RS
Sbjct: 625 TSPLQANGQTQAFQP----NPPYGSYINTAPYSPYARFPESPARNPGQGRRSG------- 673
Query: 69 SNPQYETITSSNF-QTPL-GFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLD 126
E++ S F PL +Q + C +D+ G +YLQ+KL + +
Sbjct: 674 ---DGESVQFSRFGNAPLETYQGELYGMC---------KDQYGCRYLQKKLEEQNPAHVQ 721
Query: 127 KVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSS 186
+F +++ + + ++ K +E N++Q R L + QL V+ ++++ G+
Sbjct: 722 MIFLETHIHVVELMTDPFGNYLCQKLLEYSNDEQ--RTALINNAAPQL-VKIALNQHGTR 778
Query: 187 SIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQA 246
+++K+++ ++ P V+ AL+ L+ G+ V+ +CL ++ + + FIY A
Sbjct: 779 ALQKMIEFIST-PEQTQTVINALRDRVVELVQDLNGNHVIQKCLNRLSAPDAQ--FIYDA 835
Query: 247 ALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLEL 306
C+ + H GC + ID G +R +++ I+ NA +L ++ GNYVVQ++L+L
Sbjct: 836 VGTSCVAVGTHRHGCCVLQRCIDHASGEQRARLIEQITNNAFTLVQDPFGNYVVQYILDL 895
Query: 307 EDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVA 364
+P+ IE IC S RG+ LS K S V++ C++ + + +VEE L+ S+ + ++
Sbjct: 896 NEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSALVEEMLVPSE-LEKML 954
Query: 365 CDKYGNYVIQTA-----------LIETMRP 383
D + NYV+QTA LIE +RP
Sbjct: 955 RDSFANYVVQTAMDFADPEYRTKLIEAIRP 984
>gi|159130481|gb|EDP55594.1| RNA-binding protein, putative [Aspergillus fumigatus A1163]
Length = 1062
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 159/290 (54%), Gaps = 12/290 (4%)
Query: 91 PFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFG 150
P +H + L +D+ G +YLQ KL + + +F+ + +++ + + ++
Sbjct: 642 PLEHYRGE-LYTLCKDQHGCRYLQRKLEERNPEHVQLIFDETNMHVVELMTDPFGNYLCQ 700
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K +E N++Q R L + +QL V+ ++++ G+ +++K+++ ++ P + V++AL+
Sbjct: 701 KLLEFSNDEQ--RTALINNAANQL-VKIALNQHGTRALQKMIEFIST-PEQIQTVIQALR 756
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ +CL ++ + + FIY A +C+ + H GC + ID
Sbjct: 757 DHVVELVQDLNGNHVIQKCLNRLSAEDAQ--FIYDAVGANCVVVGTHRHGCCVLQRCIDH 814
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
G +R +++ I+ NA +L ++ GNYVVQ++L+L +P+ E +C + RG+ LS K
Sbjct: 815 ASGEQRARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQK 874
Query: 331 CGSFVVQNCLK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
S V++ CL+ +++ I E +L ++ ++ D + NYV+QTA+
Sbjct: 875 FSSNVIEKCLRTAEFQMRRQMIDE--MLAGTELEKMLRDSFANYVVQTAM 922
>gi|70990304|ref|XP_750001.1| RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847633|gb|EAL87963.1| RNA-binding protein, putative [Aspergillus fumigatus Af293]
Length = 1062
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 159/290 (54%), Gaps = 12/290 (4%)
Query: 91 PFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFG 150
P +H + L +D+ G +YLQ KL + + +F+ + +++ + + ++
Sbjct: 642 PLEHYRGE-LYTLCKDQHGCRYLQRKLEERNPEHVQLIFDETNMHVVELMTDPFGNYLCQ 700
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K +E N++Q R L + +QL V+ ++++ G+ +++K+++ ++ P + V++AL+
Sbjct: 701 KLLEFSNDEQ--RTALINNAANQL-VKIALNQHGTRALQKMIEFIST-PEQIQTVIQALR 756
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ +CL ++ + + FIY A +C+ + H GC + ID
Sbjct: 757 DHVVELVQDLNGNHVIQKCLNRLSAEDAQ--FIYDAVGANCVVVGTHRHGCCVLQRCIDH 814
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
G +R +++ I+ NA +L ++ GNYVVQ++L+L +P+ E +C + RG+ LS K
Sbjct: 815 ASGEQRARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQK 874
Query: 331 CGSFVVQNCLK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
S V++ CL+ +++ I E +L ++ ++ D + NYV+QTA+
Sbjct: 875 FSSNVIEKCLRTAEFQMRRQMIDE--MLAGTELEKMLRDSFANYVVQTAM 922
>gi|261194503|ref|XP_002623656.1| RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588194|gb|EEQ70837.1| RNA-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 1119
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 189/390 (48%), Gaps = 45/390 (11%)
Query: 9 VSETQLNNLSLSFENLQVNDPSYSSFNEIHPSPPVPLYPQSTWAVPSLSGRSTVPNLSGT 68
S Q N + +F+ +P Y S+ P P +P+S P RS
Sbjct: 622 TSPLQANGQTQAFQP----NPPYGSYINTAPYSPYARFPESPARNPGQGRRSG------- 670
Query: 69 SNPQYETITSSNF-QTPL-GFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLD 126
E++ S F PL +Q + C +D+ G +YLQ+KL + +
Sbjct: 671 ---DGESVQFSRFGNAPLETYQGELYGMC---------KDQYGCRYLQKKLEEQNPAHVQ 718
Query: 127 KVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSS 186
+F +++ + + ++ K +E N++Q R L + QL V+ ++++ G+
Sbjct: 719 MIFLETHIHVVELMTDPFGNYLCQKLLEYSNDEQ--RTALINNAAPQL-VKIALNQHGTR 775
Query: 187 SIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQA 246
+++K+++ ++ P V+ AL+ L+ G+ V+ +CL ++ + + FIY A
Sbjct: 776 ALQKMIEFIST-PEQTQTVINALRDRVVELVQDLNGNHVIQKCLNRLSAPDAQ--FIYDA 832
Query: 247 ALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLEL 306
C+ + H GC + ID G +R +++ I+ NA +L ++ GNYVVQ++L+L
Sbjct: 833 VGTSCVAVGTHRHGCCVLQRCIDHASGEQRARLIEQITNNAFTLVQDPFGNYVVQYILDL 892
Query: 307 EDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVA 364
+P+ IE IC S RG+ LS K S V++ C++ + + +VEE L+ S+ + ++
Sbjct: 893 NEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSSLVEEMLVPSE-LEKML 951
Query: 365 CDKYGNYVIQTA-----------LIETMRP 383
D + NYV+QTA LIE +RP
Sbjct: 952 RDSFANYVVQTAMDFADPEYRTKLIEAIRP 981
>gi|255085754|ref|XP_002505308.1| predicted protein [Micromonas sp. RCC299]
gi|226520577|gb|ACO66566.1| predicted protein [Micromonas sp. RCC299]
Length = 336
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 167/324 (51%), Gaps = 19/324 (5%)
Query: 102 LLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
+LA+D+ G ++LQ K ++ F + ++ + + ++ K +E C ++Q
Sbjct: 17 VLARDQHGCRFLQRKFDEEGEEAVNLCFEEIIAEVVDLMMDPFGNYLVQKLLECCTDEQR 76
Query: 162 LRITLQITSQDQ----LFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
+ + L+ ++D V +++ G+ +++KL++ + P + L +ALK L+
Sbjct: 77 MGV-LRAVAKDGDGVPELVSVALNTHGTRAVQKLVETLRT-PEQVALATEALKPGVVTLI 134
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL+++ +N+ F+Y AA + C+ +A H GC + ID +R+
Sbjct: 135 KDLNGNHVIQRCLQRLGAEDNQ--FVYDAARKCCVEIATHRHGCCVLQRCIDHAADGQRR 192
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ I+ A LS++ GNYVVQ++L+L P+ + L G+Y +LS+ K S VV+
Sbjct: 193 ALVQEIAAQALVLSQDPFGNYVVQYILDLSLPWANAEVMMRLAGNYAELSMQKFSSNVVE 252
Query: 338 NCLKYRITV-----NYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
CLK N +V E ++ S + R+ D YGNYV+Q+ L T LH L
Sbjct: 253 KCLKLADASLEEHRNVVVRE-IMTSPLLDRLLMDPYGNYVVQSTLSVTKGA----LHSEL 307
Query: 393 VTKLQQNLDSLRFG-YGKHVYNFI 415
V +++ +L ++ +GK + +
Sbjct: 308 VDRIRPHLPLIKNSPFGKRILRLL 331
>gi|325094905|gb|EGC48215.1| pumilio family RNA binding protein [Ajellomyces capsulatus H88]
Length = 651
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 188/371 (50%), Gaps = 41/371 (11%)
Query: 28 DPSYSSFNEIHPSP--PVPLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPL 85
+P Y ++ I+P+P P +P+S P RS G S+ Q+ ++ +T
Sbjct: 190 NPPYGAY--INPAPFSPYSRFPESPARNPGQGRRSG----EGESS-QFSRFGNAPLET-- 240
Query: 86 GFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYA 145
+Q + C +D+ G +YLQ+KL + +F +++ + +
Sbjct: 241 -YQGELYGMC---------KDQYGCRYLQKKLEEQSPAHVQMIFLETHIHVVELMTDPFG 290
Query: 146 RFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLV 205
++ K +E N++Q R L + QL V+ ++++ G+ +++K+++ ++ P V
Sbjct: 291 NYLCQKLLEFSNDEQ--RTALINNAAPQL-VKIALNQHGTRALQKMIEFIST-PEQTQTV 346
Query: 206 MKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMN 265
+ AL+ L+ G+ V+ +CL ++ + + FIY A E C+ + H GC +
Sbjct: 347 INALRDRVVELVQDLNGNHVIQKCLNRLSATDAQ--FIYDAVGESCVPVGTHRHGCCVLQ 404
Query: 266 NFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYID 325
ID G +R +++ I+ NA +L ++ GNYVVQ++L+L +P+ IE IC S RG+
Sbjct: 405 RCIDHASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPA 464
Query: 326 LSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA------- 376
LS K S V++ C++ + + +V+E L+ S+ + ++ D + NYV+QTA
Sbjct: 465 LSKQKFSSNVIEKCIRTADPQSRSALVDEMLVPSE-LEKMLRDSFANYVVQTAMDFADPE 523
Query: 377 ----LIETMRP 383
L+E +RP
Sbjct: 524 YRTKLVEAIRP 534
>gi|327357037|gb|EGE85894.1| RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 1043
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 189/390 (48%), Gaps = 45/390 (11%)
Query: 9 VSETQLNNLSLSFENLQVNDPSYSSFNEIHPSPPVPLYPQSTWAVPSLSGRSTVPNLSGT 68
S Q N + +F+ +P Y S+ P P +P+S P RS
Sbjct: 546 TSPLQANGQTQAFQP----NPPYGSYINTAPYSPYARFPESPARNPGQGRRSG------- 594
Query: 69 SNPQYETITSSNF-QTPL-GFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLD 126
E++ S F PL +Q + C +D+ G +YLQ+KL + +
Sbjct: 595 ---DGESVQFSRFGNAPLETYQGELYGMC---------KDQYGCRYLQKKLEEQNPAHVQ 642
Query: 127 KVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSS 186
+F +++ + + ++ K +E N++Q R L + QL V+ ++++ G+
Sbjct: 643 MIFLETHIHVVELMTDPFGNYLCQKLLEYSNDEQ--RTALINNAAPQL-VKIALNQHGTR 699
Query: 187 SIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQA 246
+++K+++ ++ P V+ AL+ L+ G+ V+ +CL ++ + + FIY A
Sbjct: 700 ALQKMIEFIST-PEQTQTVINALRDRVVELVQDLNGNHVIQKCLNRLSAPDAQ--FIYDA 756
Query: 247 ALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLEL 306
C+ + H GC + ID G +R +++ I+ NA +L ++ GNYVVQ++L+L
Sbjct: 757 VGTSCVAVGTHRHGCCVLQRCIDHASGEQRARLIEQITNNAFTLVQDPFGNYVVQYILDL 816
Query: 307 EDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVA 364
+P+ IE IC S RG+ LS K S V++ C++ + + +VEE L+ S+ + ++
Sbjct: 817 NEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSALVEEMLVPSE-LEKML 875
Query: 365 CDKYGNYVIQTA-----------LIETMRP 383
D + NYV+QTA LIE +RP
Sbjct: 876 RDSFANYVVQTAMDFADPEYRTKLIEAIRP 905
>gi|406606752|emb|CCH41788.1| hypothetical protein BN7_1327 [Wickerhamomyces ciferrii]
Length = 743
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 156/280 (55%), Gaps = 11/280 (3%)
Query: 100 ILLLAQDEQGSQYLQEKL--TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
I L +D+ G ++LQ++L +G S +F+ + + +++ + + ++ K +E N
Sbjct: 399 IYSLCKDQHGCRFLQKQLDLNTGSSTI---IFDEIHQHVIELMIDPFGNYLIQKLLEKVN 455
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
++Q + + +SQ FV ++D G+ +++KL++ + N ++++++L L
Sbjct: 456 DEQRITLVENASSQ---FVSIALDPHGTRALQKLVECI-NTQKEAEIIVESLSSDVVSLS 511
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL+++ +++ FI+ AA E+C +A H GC + +D + +
Sbjct: 512 RDLNGNHVIQKCLQRLTPADSQ--FIFDAASENCSKIATHRHGCCVLQRCLDHGSKEQCE 569
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
Q+ +IS +A LS + GNYVVQ+VL ++ I I S++ + LSL K GS V++
Sbjct: 570 QLSLVISKSAVDLSLDAFGNYVVQYVLAKDEKEAIAKIIDSVKTEIVKLSLHKFGSNVIE 629
Query: 338 NCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
CL+ +++E L + D++ ++ D +GNYV+QT+L
Sbjct: 630 KCLRVSTLSKQLIDEILKSGDELVKLLNDPFGNYVLQTSL 669
>gi|408388462|gb|EKJ68146.1| hypothetical protein FPSE_11613 [Fusarium pseudograminearum CS3096]
Length = 859
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 177/326 (54%), Gaps = 20/326 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++N ++ +++ + + ++ K +E CN+D
Sbjct: 348 IYELCKDQHGCRYLQKKLEERNPDQVHMIWNETNKHVIELMTDPFGNYLCQKLLEFCNDD 407
Query: 160 QLLRITL-QITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
+ R TL Q SQD V+ ++++ G+ +++K+++ V+ P + ++++AL+ FR++ +
Sbjct: 408 E--RTTLIQNASQD--MVRIALNQHGTRALQKMIEYVST-PQQVHIIIEALR--FRVVEL 460
Query: 219 TKP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +CL ++ + + FI+ A +C+ + H GC + ID G ++
Sbjct: 461 IQDLNGNHVIQKCLNRLPPQDAQ--FIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGDQK 518
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
++ I+ +A L ++ GNYVVQ++++L +P E I + + LS K S V+
Sbjct: 519 LWLIQRITEHARVLVQDPFGNYVVQYIIDLNEPIFTEPIVQTFKDCISQLSRHKFSSNVI 578
Query: 337 QNCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
+ CL+ + + IV+E L N D + R+ D + NYVIQTAL E P H RLV
Sbjct: 579 EKCLRCSQPPSRDLIVDELLRNQD-MERLLRDSFANYVIQTAL-EYATP---HYKYRLVE 633
Query: 395 KLQQNLDSLR-FGYGKHVYNFIKDCD 419
++ L +R YG+ + I D
Sbjct: 634 AIRPILPQIRTTPYGRRIQAKISAFD 659
>gi|46107916|ref|XP_381017.1| hypothetical protein FG00841.1 [Gibberella zeae PH-1]
Length = 779
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 177/326 (54%), Gaps = 20/326 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++N ++ +++ + + ++ K +E CN+D
Sbjct: 347 IYELCKDQHGCRYLQKKLEERNPDQVHMIWNETNKHVIELMTDPFGNYLCQKLLEFCNDD 406
Query: 160 QLLRITL-QITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
+ R TL Q SQD V+ ++++ G+ +++K+++ V+ P + ++++AL+ FR++ +
Sbjct: 407 E--RTTLIQNASQD--MVRIALNQHGTRALQKMIEYVST-PQQVHIIIEALR--FRVVEL 459
Query: 219 TKP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +CL ++ + + FI+ A +C+ + H GC + ID G ++
Sbjct: 460 IQDLNGNHVIQKCLNRLPPQDAQ--FIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGDQK 517
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
++ I+ +A L ++ GNYVVQ++++L +P E I + + LS K S V+
Sbjct: 518 LWLIQRITEHARVLVQDPFGNYVVQYIIDLNEPIFTEPIVQTFKDCISQLSRHKFSSNVI 577
Query: 337 QNCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
+ CL+ + + IV+E L N D + R+ D + NYVIQTAL E P H RLV
Sbjct: 578 EKCLRCSQPPSRDLIVDELLRNQD-MERLLRDSFANYVIQTAL-EYATP---HYKYRLVE 632
Query: 395 KLQQNLDSLR-FGYGKHVYNFIKDCD 419
++ L +R YG+ + I D
Sbjct: 633 AIRPILPQIRTTPYGRRIQAKISAFD 658
>gi|116199395|ref|XP_001225509.1| hypothetical protein CHGG_07853 [Chaetomium globosum CBS 148.51]
gi|88179132|gb|EAQ86600.1| hypothetical protein CHGG_07853 [Chaetomium globosum CBS 148.51]
Length = 1010
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 175/328 (53%), Gaps = 20/328 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNV---VSEFTFQIICNQYARFVFGKFIETC 156
I L +D+ G +YLQ++L ++R D++ + ++ +++ + + ++ K +E C
Sbjct: 601 IYSLCKDQHGCRYLQKQL---ENRIPDQIHMIWLETNQHVVELMTDPFGNYLCQKLLEYC 657
Query: 157 NEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
N+D+ + TS V ++++ G+ +++K+++ V + ++L+++AL+ L
Sbjct: 658 NDDERTVLVQNSTSN---MVTIALNQHGTRALQKMIEHVTTQV-QINLIVEALRNQVVEL 713
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +CL ++ + FI+ A +HC+ + H GC + ID G ++
Sbjct: 714 IQDLNGNHVIQKCLNKLSAADAS--FIFDAVGKHCVEVGTHRHGCCVLQRCIDHADGAQK 771
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
++ I+ +A +L ++ GNYVVQ++++L +P E + +G LS K S VV
Sbjct: 772 IWLIERITDHAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVKQFQGRIGMLSKHKFSSNVV 831
Query: 337 QNCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
+ CL+ + + IV E LL +I R+ D +GNYVIQTAL + P S H RL+
Sbjct: 832 EKCLRCAAEESRDMIVSE-LLTPGEIDRLLRDSFGNYVIQTAL-DYATPMSKH---RLIE 886
Query: 395 KLQQNLDSLRF-GYGKHVYNFIKDCDLQ 421
++ L S+R YG+ + I+ D +
Sbjct: 887 AIRPILPSIRATPYGRRIQAKIQTHDTR 914
>gi|302783855|ref|XP_002973700.1| hypothetical protein SELMODRAFT_53500 [Selaginella moellendorffii]
gi|300158738|gb|EFJ25360.1| hypothetical protein SELMODRAFT_53500 [Selaginella moellendorffii]
Length = 316
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 167/311 (53%), Gaps = 12/311 (3%)
Query: 104 AQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLR 163
A+D+ G ++LQ+K + G +DK+F V + ++ + + ++ K +E N+ Q R
Sbjct: 12 AKDQHGCRFLQKKFSEGSLEEIDKIFAEVIDHLVDLMTDPFGNYLVQKLLEVSNDTQR-R 70
Query: 164 ITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGS 223
L++ +++ V S++ G+ +++KL++ + + P + +V +L + L+ G+
Sbjct: 71 EILRVVTRNGELVNISLNMHGTRAVQKLIETLKS-PEQVSMVTSSLMQGVVTLIKDSNGN 129
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLI 283
VV +CL+++ N FI AA HC+ + H GC + ID G + ++ I
Sbjct: 130 HVVQKCLQKL--SNEDIQFIIDAAARHCVDIGTHRHGCCVLQRCIDFASGTQCHFLVSEI 187
Query: 284 SVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY- 342
+ NA LS++ GNYVVQ++L+LE ++ + + L G++ L++ K S VV+ CLK
Sbjct: 188 AANALILSQDQYGNYVVQYILDLEQSWITLDVIYRLEGNFALLAMQKFSSNVVEKCLKQS 247
Query: 343 -RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLD 401
+ I+ E ++ S + ++ D + NYVIQ AL ++ S LH LV ++ ++
Sbjct: 248 SEDSRALIIRE-IITSSLLSQLLQDPFANYVIQCAL--SVAKGS--LHTALVDAIRPHVP 302
Query: 402 SLRFG-YGKHV 411
LR +GK +
Sbjct: 303 VLRSSPFGKRI 313
>gi|295658885|ref|XP_002790002.1| pumilio domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282085|gb|EEH37651.1| pumilio domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1154
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 173/325 (53%), Gaps = 18/325 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+ +D+ G +YLQ+KL + + +F +++ + + ++ K +E N++Q
Sbjct: 614 MCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSNDEQ-- 671
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V+ ++++ G+ +++K+++ ++ P V+KAL+ L+ G
Sbjct: 672 RTALINNAAPQL-VKIALNQHGTRALQKMIEFIST-PEQTQTVIKALRGRVVELVQDLNG 729
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A C+ + H GC + ID G +R +++
Sbjct: 730 NHVIQKCLNRLSATDAQ--FIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQ 787
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ NA +L ++ GNYVVQ++L+L +P+ IE IC S RG+ LS K S V++ C+
Sbjct: 788 ITKNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCI-- 845
Query: 343 RITVN----YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
R N ++EE L+ S ++ ++ D + NYV+QTA+ + P+S +L+ ++
Sbjct: 846 RTADNQCRAALIEEMLVPS-ELEKMLRDSFANYVVQTAM-DFADPDS---RNKLIDAIRP 900
Query: 399 NLDSLR-FGYGKHVYNFIKDCDLQN 422
L ++R +G+ + I + Q
Sbjct: 901 ILPAIRQTPHGRRIAGKIMSAENQG 925
>gi|302787963|ref|XP_002975751.1| hypothetical protein SELMODRAFT_53499 [Selaginella moellendorffii]
gi|300156752|gb|EFJ23380.1| hypothetical protein SELMODRAFT_53499 [Selaginella moellendorffii]
Length = 316
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 165/311 (53%), Gaps = 12/311 (3%)
Query: 104 AQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLR 163
A+D+ G ++LQ+K + G +DK+F V + ++ + + ++ K +E N+ Q
Sbjct: 12 AKDQHGCRFLQKKFSEGSLEEIDKIFAEVIDHLVDLMTDPFGNYLVQKLLEVSNDTQRRE 71
Query: 164 ITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGS 223
I +T +L V S++ G+ +++KL++ + + P + +V +L + L+ G+
Sbjct: 72 ILRGVTRNGEL-VNISLNMHGTRAVQKLIETLKS-PEQVSMVTSSLMQGVVTLIKDSNGN 129
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLI 283
VV +CL+++ N FI AA HC+ + H GC + ID G + ++ I
Sbjct: 130 HVVQKCLQKL--SNEDIQFIIDAAARHCVDIGTHRHGCCVLQRCIDFASGTQCHFLVSEI 187
Query: 284 SVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY- 342
+ NA LS++ GNYVVQ++L+LE ++ + + L G++ L++ K S VV+ CLK
Sbjct: 188 AANALILSQDQYGNYVVQYILDLEQSWITLDVIYRLEGNFALLAMQKFSSNVVEKCLKQS 247
Query: 343 -RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLD 401
+ I+ E ++ S + ++ D + NYVIQ AL ++ S LH LV ++ ++
Sbjct: 248 SEDSRALIIRE-IITSSLLSQLLQDPFANYVIQCAL--SVAKGS--LHTALVDAIRPHVP 302
Query: 402 SLRFG-YGKHV 411
LR +GK +
Sbjct: 303 VLRSSPFGKRI 313
>gi|119497273|ref|XP_001265396.1| RNA-binding protein, putative [Neosartorya fischeri NRRL 181]
gi|119413558|gb|EAW23499.1| RNA-binding protein, putative [Neosartorya fischeri NRRL 181]
Length = 1056
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 158/290 (54%), Gaps = 12/290 (4%)
Query: 91 PFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFG 150
P +H + L +D+ G +YLQ KL + + +F+ + +++ + + ++
Sbjct: 636 PLEHYRGE-LYTLCKDQHGCRYLQRKLEERNPEHVQFIFDETNMHVVELMTDPFGNYLCQ 694
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K +E N++Q R L + QL V+ ++++ G+ +++K+++ ++ P + V++AL+
Sbjct: 695 KLLEYSNDEQ--RTALINNAAHQL-VKIALNQHGTRALQKMIEFIST-PEQIQTVIQALR 750
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ +CL ++ + + FIY A +C+ + H GC + ID
Sbjct: 751 DHVVELVQDLNGNHVIQKCLNRLSAEDAQ--FIYDAVGGNCVVVGTHRHGCCVLQRCIDH 808
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
G +R +++ I+ NA +L ++ GNYVVQ++L+L +P+ E +C + RG+ LS K
Sbjct: 809 ASGEQRARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQK 868
Query: 331 CGSFVVQNCLK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
S V++ CL+ +++ I E +L ++ ++ D + NYV+QTA+
Sbjct: 869 FSSNVIEKCLRTAEFQMRRQMIDE--MLAGAELEKMLRDSFANYVVQTAM 916
>gi|320591503|gb|EFX03942.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 1112
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 174/323 (53%), Gaps = 14/323 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ++L + + + ++ ++ +++ + + ++ K +E CN+D
Sbjct: 658 IYELCKDQHGCRYLQKQLENRNPEQVHMIWLETNQHVVELMTDPFGNYLCQKLLEYCNDD 717
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + +Q +QD V+ ++++ G+ +++K+++ ++ + ++++AL+ L+
Sbjct: 718 ERT-VLIQNAAQD--MVRIALNQHGTRALQKMIEFISTEA-QVQIIIEALRHCVVDLIKD 773
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ N + FI+ A C+ + H GC + ID G ++ +
Sbjct: 774 LNGNHVIQKCLNKLTPANAQ--FIFDAVGGACVEVGTHRHGCCVLQRCIDHASGDQKVWL 831
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ A +L ++ GNYVVQ++++L D E + RG LS K S VV+ C
Sbjct: 832 IQRITEEAVTLIQDPYGNYVVQYIIDLNDLNFTEPLVARFRGRICSLSRHKFSSNVVEKC 891
Query: 340 LKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L+ + + + IVEE +LNS ++ R+ D Y NYV+QTAL E P ++ RLV ++
Sbjct: 892 LRCSLEPSRDMIVEE-VLNSGEVERLVRDSYANYVVQTAL-EYATP---YMKARLVDSIR 946
Query: 398 QNLDSLR-FGYGKHVYNFIKDCD 419
L +R +G+ + I+ D
Sbjct: 947 PFLAQIRSTPHGRRIQAKIQAYD 969
>gi|451846158|gb|EMD59469.1| hypothetical protein COCSADRAFT_259016 [Cochliobolus sativus
ND90Pr]
Length = 1004
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 156/296 (52%), Gaps = 18/296 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL ++ + +F+ + +++ + + ++ K +E CN++
Sbjct: 591 IYSLCKDQHGCRFLQKKLEERNAENIQIIFDETAPHVVELMTDPFGNYLCQKLLEFCNDE 650
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R TL + + VQ + ++ G+ +++K+++ ++ ++++AL L+
Sbjct: 651 Q--RNTL-VRNAAPAMVQIAFNQHGTRALQKMIEFISTDD-QTQMIIRALSGQVVDLIQD 706
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + + + FI+ A EHC+ + H GC + ID G ++ +
Sbjct: 707 LNGNHVIQKCLNHLKSPDAQ--FIFDAVGEHCITVGTHRHGCCVLQRCIDHASGFQKVDL 764
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ ++ L ++ GNYVVQ++L+L D +C +G +LS K S V++ C
Sbjct: 765 IRKITAHSFHLVQDPFGNYVVQYILDLNDTSFTTPMCQGFQGKICELSKQKFSSNVIEKC 824
Query: 340 LK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++ V ++ E LL+ +Q+ ++ D YGNYVIQTA LIE MRP
Sbjct: 825 IRCAEPHVKGMMIEELLDVEQLEQLMRDSYGNYVIQTALEFAPAELCVHLIEAMRP 880
>gi|310798475|gb|EFQ33368.1| hypothetical protein GLRG_08647 [Glomerella graminicola M1.001]
Length = 802
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 169/320 (52%), Gaps = 14/320 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN+D
Sbjct: 384 IYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 443
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + +Q + D V+ ++++ G+ +++K+++ V P +++++ AL+ L+
Sbjct: 444 ERT-VLIQNAAAD--MVRIALNQHGTRALQKMIEFVTT-PTQIEMIINALRFQVVELIQD 499
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FI+ A HC+ + H GC + ID G ++ +
Sbjct: 500 LNGNHVIQKCLNKLSAQDAQ--FIFDAVGTHCVDVGTHRHGCCVLQRCIDHASGDQKTWL 557
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ +A L ++ GNYVVQ++++L +P E I + LS K S V++ C
Sbjct: 558 IAKITEHAPILVQDPFGNYVVQYIIDLNEPSFTEPIVRMFQNRIGQLSRHKFSSNVIEKC 617
Query: 340 LK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L+ + + IVEE LL +I R+ D Y NYVIQTAL E P H RLV ++
Sbjct: 618 LRCSQEPSRDMIVEE-LLTPGEIERLLRDSYANYVIQTAL-EYATP---HGKFRLVDAIR 672
Query: 398 QNLDSLR-FGYGKHVYNFIK 416
L S+R YG+ + I+
Sbjct: 673 PILPSIRSTPYGRRIQAKIQ 692
>gi|330805438|ref|XP_003290689.1| hypothetical protein DICPUDRAFT_155226 [Dictyostelium purpureum]
gi|325079152|gb|EGC32766.1| hypothetical protein DICPUDRAFT_155226 [Dictyostelium purpureum]
Length = 926
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 167/321 (52%), Gaps = 16/321 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL D + + +F V ++ +++ + + ++ K +E CN+
Sbjct: 606 IYPLCRDQHGCRFLQKKLEESDPQLTEIIFKEVCDYMLELMTDPFGNYLCQKLLEHCNDQ 665
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L I ++ + V+ S++ G+ +++K+++ + P ++L+ ++LK L+
Sbjct: 666 QRLTIIEKVGTD---IVRISMNMHGTRAVQKMIEYLTT-PEQIELIKRSLKDSVVQLIQD 721
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALE--HCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL ++ +N+ FIY + +C+ +A H GC + ID ++
Sbjct: 722 LNGNHVIQKCLNKLSPQDNQ--FIYDSVSSDGNCVAVATHRHGCCVLQRCIDHASESQKL 779
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
Q++ + N+ L ++ GNYVVQ+VL+L L + GH L+ K S VV+
Sbjct: 780 QLIQEVIANSLVLVQDPYGNYVVQYVLDLPFQGLATEMAKRFVGHVPILATQKFSSNVVE 839
Query: 338 NCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
CL T +++E +++ D + + D Y NYVIQT+L P H H +LV
Sbjct: 840 KCLHVADATTRGNLIQE-VIDYDNLLYLLQDPYANYVIQTSL-SISEP---HQHTKLVEA 894
Query: 396 LQQNLDSLR-FGYGKHVYNFI 415
++ +L L+ YGK + N I
Sbjct: 895 IRPHLPLLKNTPYGKRIQNKI 915
>gi|406863177|gb|EKD16225.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1055
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 170/320 (53%), Gaps = 14/320 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN+D
Sbjct: 633 IYALCKDQHGCRYLQKKLEDRNPDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 692
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ T+ I + V+ ++++ G+ +++K+++ ++ P + +++AL+ L+
Sbjct: 693 ER---TVLIENASHDLVRIALNQHGTRALQKMIEFIST-PGQIQTIIEALRHRVVELIQD 748
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FI+ A HC+ + H GC + ID G ++ +
Sbjct: 749 LNGNHVIQKCLNKLSSTDAQ--FIFDAVGTHCVDVGTHRHGCCVLQRCIDHASGEQKAWL 806
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS NA L ++ GNYVVQ++L+L +P E + +G LS K S V++ C
Sbjct: 807 IRQISNNAYVLVQDPFGNYVVQYILDLNEPTFTEPLVAMFQGRVGQLSKQKFSSNVIEKC 866
Query: 340 LK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L+ + + ++EE +L ++ R+ D + NYVIQTAL + PN + RL+ ++
Sbjct: 867 LRCAQEPSKDMLIEE-MLQPAELDRLLRDSFANYVIQTAL-DYANPN---MKARLIEAIR 921
Query: 398 QNLDSLRFG-YGKHVYNFIK 416
L ++R YG+ + I+
Sbjct: 922 PYLPAIRTTPYGRRIQAKIQ 941
>gi|115396764|ref|XP_001214021.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193590|gb|EAU35290.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1019
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 153/276 (55%), Gaps = 7/276 (2%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL ++ + +F +++ + + ++ K +E N++Q
Sbjct: 612 LCKDQHGCRYLQRKLEERNAEHVQMIFEETHLHVVELMTDPFGNYLCQKLLEYSNDEQ-- 669
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R TL + QL V+ ++++ G+ +++K+++ ++ P V+++L+ L+ G
Sbjct: 670 RTTLINNAAHQL-VKIALNQHGTRALQKMIEFIST-PEQTTTVIQSLQDHVVELVQDLNG 727
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A +C+ + H GC + ID G +R +++
Sbjct: 728 NHVIQKCLNRLSAEDAQ--FIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQ 785
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ NA +L ++ GNYVVQ++L+L +P+ E +C + RG+ LS K S V++ CL+
Sbjct: 786 ITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCLRT 845
Query: 343 R-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ + + + +L +++ ++ D + NYV+QTA+
Sbjct: 846 ADVQIRRQMIDEMLAGNELEKMLRDSFANYVVQTAM 881
>gi|356510185|ref|XP_003523820.1| PREDICTED: uncharacterized protein LOC100784921 [Glycine max]
Length = 653
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 173/347 (49%), Gaps = 12/347 (3%)
Query: 58 GRSTVP-NLSGTSNPQYETITSSNFQT-P--LGFQANPFQHCANSGILLLAQDEQGSQYL 113
G S VP N + P + +F + P L F + P C I LA+D+ G ++L
Sbjct: 298 GGSVVPKNFYSAAAPSGQRSGGGDFSSLPMLLDFYSVPDAQCY---IYNLAKDQNGCRFL 354
Query: 114 QEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQ 173
Q + G + + VF + +++ + + ++ K ++ C +DQLL+I L +T+
Sbjct: 355 QRMVDEGTYQDICIVFEGIIGNVVELMIDSFGNYLVQKLLDVCTDDQLLQIVLLLTNHPT 414
Query: 174 LFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQI 233
V+ S++ G+ ++KL++ + + + LV A++ F L+ G+ V+ +CL+
Sbjct: 415 QLVRISLNTHGTRVVQKLIETLTSDE-QVSLVKSAIQPGFLDLIKDLNGNHVIQRCLQCF 473
Query: 234 YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRN 293
+N+ FI+ AA++ C+ +A H GC + I G R +++ I + L+++
Sbjct: 474 SCQDNQ--FIFDAAVKFCVEIATHRHGCCVLQCCIHHSTGKNRDKLVTEICKHGLLLAQD 531
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEF 353
GNYVVQ+V+E + P + + +G ++ LS K S VV+ CLK+ +
Sbjct: 532 AFGNYVVQYVIESDTPAVSVKLLSQFKGSFVILSTQKFSSHVVEKCLKHIGNSRPRIVGE 591
Query: 354 LLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNL 400
L + + ++ D Y NYVI++AL+ T P LH + + + L
Sbjct: 592 LTSVPRFEQLLQDPYANYVIRSALLFTKGP--LHASLAEIVRAHKGL 636
>gi|290985728|ref|XP_002675577.1| predicted protein [Naegleria gruberi]
gi|284089174|gb|EFC42833.1| predicted protein [Naegleria gruberi]
Length = 737
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 152/280 (54%), Gaps = 10/280 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ LA+D+ G ++LQ+K+T G+ + L VF+ + + +++ + + ++ K +E C +
Sbjct: 412 VYKLAKDQYGCRFLQKKITDGE-QGLQMVFDEIYDHIVELMTDPFGNYLCQKLVEHCTNE 470
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
TL I + + + S++ G+ +++KL++ + + + +++ +ALK L+
Sbjct: 471 HK---TLIIRAVSKDLINISMNMHGTRAVQKLIECLTTQDQIGEII-EALKDSVVPLIKD 526
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+Q+ N + FIY A C+ +A H+ GC + ID +R +
Sbjct: 527 LNGNHVIQRCLQQLIPENKQ--FIYNAVAGRCVEVATHKHGCCVLQRCIDHAAESQRMML 584
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ + NA +L +N GNYVVQ+VL+L D + E I G LS+ K S V++ C
Sbjct: 585 IKEVIANAHTLIQNPFGNYVVQYVLDLGDDSINEKIIARFYGSIASLSINKFSSNVIEKC 644
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
L+ N ++EE L + + + + D +GNYV+QTA+
Sbjct: 645 LRIGNENVKNTMIEEVLEDRN-LSALLQDSFGNYVVQTAI 683
>gi|156059478|ref|XP_001595662.1| hypothetical protein SS1G_03751 [Sclerotinia sclerotiorum 1980]
gi|154701538|gb|EDO01277.1| hypothetical protein SS1G_03751 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1085
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 174/322 (54%), Gaps = 18/322 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN++
Sbjct: 668 IYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDE 727
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ T+ I + V+ ++++ G+ +++K+++ ++ P + ++ AL+ FR++ +
Sbjct: 728 ER---TVLIENASHDLVRIALNQHGTRALQKMIEFIST-PGQVQTIIGALR--FRVVELI 781
Query: 220 KP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +CL ++ + + FI+ A +HC+ + H GC + ID G ++
Sbjct: 782 QDLNGNHVIQKCLNKLSPTDAQ--FIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGDQKA 839
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ IS NA L ++ GNYVVQ++L+L +P E + G LS K S V++
Sbjct: 840 WLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFGGRVAQLSKQKFSSNVIE 899
Query: 338 NCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
CL+ + + ++EE +L +Q+ + D + NYVIQTAL + PN + RL+
Sbjct: 900 KCLRCAQEPSKDMLIEE-MLQPNQLDSLLRDSFANYVIQTAL-DYANPN---MKTRLIEA 954
Query: 396 LQQNLDSLRFG-YGKHVYNFIK 416
++ +L ++R YG+ + I+
Sbjct: 955 IRPHLPAIRTTPYGRRIQAKIQ 976
>gi|342879890|gb|EGU81123.1| hypothetical protein FOXB_08397 [Fusarium oxysporum Fo5176]
Length = 1061
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 172/323 (53%), Gaps = 14/323 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL ++ + ++ ++ +++ + + ++ K +E CN+D
Sbjct: 611 IYELCKDQHGCRYLQKKLEERNADQVHIIWVETNQHVIELMTDPFGNYLCQKLLEFCNDD 670
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + +Q SQD V+ ++++ G+ +++K+++ V+ P + ++++AL+ L+
Sbjct: 671 ERT-VLIQNASQD--MVRIALNQHGTRALQKMIEYVST-PQQVHIIIEALRYRVVELIQD 726
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FI+ A C+ + H GC + ID G ++ +
Sbjct: 727 LNGNHVIQKCLNKLTPPDAQ--FIFDAVGGSCVEVGTHRHGCCVLQRCIDHASGDQKLWL 784
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ +A L ++ GNYVVQ++++L +P E I + + LS K S V++ C
Sbjct: 785 IQRITEHARILVQDPFGNYVVQYIIDLNEPLFTEPIVLTFKDCITQLSRHKFSSNVIEKC 844
Query: 340 LK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L+ + + IVEE L N + + R+ D + NYVIQTAL E P+ H RLV ++
Sbjct: 845 LRCAQPPSKDLIVEELLRNQE-MERLLRDSFANYVIQTAL-EYATPHQKH---RLVEAIR 899
Query: 398 QNLDSLR-FGYGKHVYNFIKDCD 419
L +R YG+ + I D
Sbjct: 900 PILPQIRTTPYGRRIQAKISAFD 922
>gi|121703235|ref|XP_001269882.1| RNA-binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119398025|gb|EAW08456.1| RNA-binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 1002
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 151/278 (54%), Gaps = 11/278 (3%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL D + +F+ +++ + + ++ K +E N+DQ
Sbjct: 593 LCKDQHGCRYLQRKLEERDPEHVQLIFDETHLHVVELMTDPFGNYLCQKLLEYSNDDQ-- 650
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V+ ++++ G+ +++K+++ ++ V++AL+ L+ G
Sbjct: 651 RTALINNAAHQL-VKIALNQHGTRALQKMIEFISTAE-QTQTVIQALRDHVVELVQDLNG 708
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A +C+ + H GC + ID G +R +++
Sbjct: 709 NHVIQKCLNRLSAEDAQ--FIYDAVGGNCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQ 766
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK- 341
I+ NA +L ++ GNYVVQ++L+L +P+ E +C S RG+ LS K S V++ CL+
Sbjct: 767 ITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQSFRGNIPALSKQKFSSNVIEKCLRT 826
Query: 342 --YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++I I E +L ++ ++ D + NYV+QTA+
Sbjct: 827 ADFQIKRQMIDE--MLVGVELEKMLRDSFANYVVQTAM 862
>gi|225554623|gb|EEH02919.1| pumilio RNA binding protein [Ajellomyces capsulatus G186AR]
Length = 793
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 188/371 (50%), Gaps = 41/371 (11%)
Query: 28 DPSYSSFNEIHPSP--PVPLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPL 85
+P Y ++ I+P+P P +P+S P RS G S+ Q+ ++ +T
Sbjct: 310 NPPYGAY--INPAPFSPYSRFPESPARNPGQGRRSG----DGESS-QFSRFGNAPLET-- 360
Query: 86 GFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYA 145
+Q + C +D+ G +YLQ+KL + + +F +++ + +
Sbjct: 361 -YQGELYGMC---------KDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFG 410
Query: 146 RFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLV 205
++ K +E N++Q R L + QL V+ ++++ G+ +++K+++ ++ P V
Sbjct: 411 NYLCQKLLEFSNDEQ--RTALINNAAPQL-VKIALNQHGTRALQKMIEFIST-PEQTQTV 466
Query: 206 MKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMN 265
+ AL+ L+ G+ V+ +CL ++ + + FIY A C+ + H GC +
Sbjct: 467 INALRDRVVELVQDLNGNHVIQKCLNRLSATDAQ--FIYDAVGASCVPVGTHRHGCCVLQ 524
Query: 266 NFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYID 325
ID G +R +++ I+ NA +L ++ GNYVVQ++L+L +P+ IE IC S RG+
Sbjct: 525 RCIDHASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPA 584
Query: 326 LSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA------- 376
LS K S V++ C++ + + +V+E L+ S ++ ++ D + NYV+QTA
Sbjct: 585 LSKQKFSSNVIEKCIRTADPQSRSALVDEMLVPS-ELEKMLRDSFANYVVQTAMDFADPE 643
Query: 377 ----LIETMRP 383
L+E +RP
Sbjct: 644 YRTKLVEAIRP 654
>gi|154277036|ref|XP_001539363.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414436|gb|EDN09801.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1175
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 188/371 (50%), Gaps = 41/371 (11%)
Query: 28 DPSYSSFNEIHPSP--PVPLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPL 85
+P Y ++ I+P+P P +P+S P RS G S+ Q+ ++ +T
Sbjct: 692 NPPYGAY--INPAPFSPYSRFPESPARNPGQGRRSG----EGESS-QFSRFGNAPLET-- 742
Query: 86 GFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYA 145
+Q + C +D+ G +YLQ+KL + + +F +++ + +
Sbjct: 743 -YQGELYGMC---------KDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFG 792
Query: 146 RFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLV 205
++ K +E N++Q R L + QL V+ ++++ G+ +++K+++ ++ P V
Sbjct: 793 NYLCQKLLEFSNDEQ--RTALINNAAPQL-VKIALNQHGTRALQKMIEFIST-PEQTQTV 848
Query: 206 MKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMN 265
+ AL+ L+ G+ V+ +CL ++ + + FIY A C+ + H GC +
Sbjct: 849 INALRDRVVELVQDLNGNHVIQKCLNRLSATDAQ--FIYDAVGASCVPVGTHRHGCCVLQ 906
Query: 266 NFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYID 325
ID G +R +++ I+ NA +L ++ GNYVVQ++L+L +P+ IE IC S RG+
Sbjct: 907 RCIDHASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNISA 966
Query: 326 LSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA------- 376
LS K S V++ C++ + + +V+E L+ S+ + ++ D + NYV+QTA
Sbjct: 967 LSKQKFSSNVIEKCIRTADPQSRSALVDEMLVPSE-LEKMLRDSFANYVVQTAMDFADPE 1025
Query: 377 ----LIETMRP 383
L+E +RP
Sbjct: 1026 YRTKLVEAIRP 1036
>gi|409051228|gb|EKM60704.1| hypothetical protein PHACADRAFT_246773 [Phanerochaete carnosa
HHB-10118-sp]
Length = 976
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 172/342 (50%), Gaps = 26/342 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL G D +F +++ + + ++ K +E C ++
Sbjct: 545 IPSLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFGHFPELMTDPFGNYLCQKLLEYCTDE 604
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + + +QD V S++ G+ +++K++ ++ R + +++ AL +L+
Sbjct: 605 QR-NLICESVAQD--LVNISLNMHGTRAVQKMIDFLSTRRQIHSIIV-ALSLHVVVLIKD 660
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + +D P+R Q+
Sbjct: 661 LNGNHVIQKCLNKLAPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCVDHASEPQRIQL 718
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA +L ++ GNYVVQ++L+L D + + G+ LS+ K S V++ C
Sbjct: 719 VNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKC 778
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP--- 383
++ T ++ E LLN ++ ++ D YGNY +QTA L+E +RP
Sbjct: 779 VRVAEHSTRKMLIGE-LLNRTRLEKLLRDSYGNYCVQTALDYAEPTQRALLVEGIRPVLP 837
Query: 384 --NSLHLHQRLVTKLQ-QNLDSLRFGYGKHVYNFIKDCDLQN 422
+ +R+ KLQ + LD FG + + + L+N
Sbjct: 838 LIRNTPYGKRIQNKLQREQLDGPGFGGSHYGQQSVANLALRN 879
>gi|303282033|ref|XP_003060308.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457779|gb|EEH55077.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 333
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 165/322 (51%), Gaps = 15/322 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +LA+D+ G ++LQ K ++K ++ + ++ + + ++ K +E CN++
Sbjct: 15 IGVLARDQHGCRFLQRKFDDEGEDAVNKCYDEIIAEVVDLMMDPFGNYLVQKLLECCNDE 74
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q I L+ V +++ G+ +++KL++ + P + L +ALK L+
Sbjct: 75 QRTGI-LKAGDGVPELVSVALNTHGTRAVQKLVETLRT-PEHIRLATEALKPGVVTLIKD 132
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+++ +N+ F+Y AA + +A H GC + +D +R+ +
Sbjct: 133 LNGNHVIQRCLQRLEAEDNQ--FVYDAAKACSVEIATHRHGCCVLQRCVDHAADSQRRAL 190
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ A LS++ GNYVVQ++L+L P+ + L G Y +LS+ K S VV+ C
Sbjct: 191 VNEIAAQALVLSQDPFGNYVVQYILDLGLPWANAEVMVRLGGAYAELSMQKFSSNVVEKC 250
Query: 340 LK-----YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
LK N +V E +++S + R+ D YGNYV+Q+ L T LH LV
Sbjct: 251 LKLAGQELEEHRNVVVRE-IMSSPLLDRLLMDPYGNYVVQSTLTVTKGS----LHAELVE 305
Query: 395 KLQQNLDSLRFG-YGKHVYNFI 415
+++ +L ++ +GK + +
Sbjct: 306 RIRPHLPLIKNSPFGKRILRLL 327
>gi|451994865|gb|EMD87334.1| hypothetical protein COCHEDRAFT_1113338 [Cochliobolus
heterostrophus C5]
Length = 922
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 154/296 (52%), Gaps = 18/296 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL ++ + +F+ + +++ + + ++ K +E CN++
Sbjct: 509 IYSLCKDQHGCRFLQKKLEERNAENIQIIFDETAPHVVELMTDPFGNYLCQKLLEFCNDE 568
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + + + VQ + ++ G+ +++K+++ ++ ++++AL L+
Sbjct: 569 QR---NILVRNAAPAMVQIAFNQHGTRALQKMIEFISTDD-QTQMIIRALSGQVVDLIQD 624
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + + + FI+ A EHC+ + H GC + ID G ++ +
Sbjct: 625 LNGNHVIQKCLNHLKSPDAQ--FIFDAVGEHCITVGTHRHGCCVLQRCIDHASGFQKVDL 682
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ ++ L ++ GNYVVQ++L+L D +C +G +LS K S V++ C
Sbjct: 683 IRKITAHSFHLVQDPFGNYVVQYILDLNDASFTTPMCQGFQGKICELSKQKFSSNVIEKC 742
Query: 340 LK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++ V ++ E LL+ +Q+ ++ D YGNYVIQTA LIE MRP
Sbjct: 743 IRCAEPHVKGMMIEELLDVEQLEQLMRDSYGNYVIQTALEFAPAELCVHLIEAMRP 798
>gi|341038523|gb|EGS23515.1| pumilio domain-containing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1033
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 177/336 (52%), Gaps = 21/336 (6%)
Query: 92 FQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGK 151
+ CA + I L +D+ G +YLQ++L + + ++ V++ +++ + + ++ K
Sbjct: 591 LEQCAGN-IYSLCKDQHGCRYLQKQLENRIPAQIHMIWLEVNQHIVELMMDPFGNYLCQK 649
Query: 152 FIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKR 211
+E C++++ T+ I + V+ ++++ G+ +++K+++ V P ++L+++AL+
Sbjct: 650 LVEFCSDEER---TVLIQNAAPEMVRIALNQHGTRALQKMIEHVTT-PAQVNLIVEALRH 705
Query: 212 LFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEM 271
L+ G+ V+ +CL ++ + FI+ A ++C+ + H GC + ID
Sbjct: 706 QVVELIQDLNGNHVIQKCLNKLSATDAS--FIFDAVGKNCVEVGTHRHGCCVLQRCIDHA 763
Query: 272 KGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
G ++ ++ I+ +A +L ++ GNYVVQ++++L + E + +G I LS K
Sbjct: 764 DGAQKVWLIECITAHAVTLVQDPFGNYVVQYIIDLNEETFTEPLVNQFKGRIISLSKHKF 823
Query: 332 GSFVVQNCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL---IETMRPNSL 386
S VV+ CL+ + IV E LL ++ R+ D + NYVIQTAL M+P
Sbjct: 824 SSNVVEKCLRCASDAARDMIVNE-LLTPGEMERLLRDSFANYVIQTALDYATANMKP--- 879
Query: 387 HLHQRLVTKLQQNLDSLRF-GYGKHVYNFIKDCDLQ 421
RLV ++ +L S+R YG+ + I+ D +
Sbjct: 880 ----RLVEAIRPSLPSIRATPYGRRIQAKIQAYDAR 911
>gi|260947166|ref|XP_002617880.1| hypothetical protein CLUG_01339 [Clavispora lusitaniae ATCC 42720]
gi|238847752|gb|EEQ37216.1| hypothetical protein CLUG_01339 [Clavispora lusitaniae ATCC 42720]
Length = 707
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 149/291 (51%), Gaps = 19/291 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSG-------DSRFLDK------VFNVVSEFTFQIICNQYAR 146
I L +D+ G ++LQ +L G +S L +FN + +++ + +
Sbjct: 384 IYSLCKDQHGCRFLQRQLDLGMEAKRSEESGVLSNEVAATMIFNEIYMKIVELMTDPFGN 443
Query: 147 FVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVM 206
++ K E + DQ R+ L + +L ++ ++D G+ +++KL++ + + L++
Sbjct: 444 YLIQKLFENVSADQ--RLILVKNAAPEL-IRIALDPHGTRALQKLVECIDTKEES-QLII 499
Query: 207 KALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNN 266
+L L G+ VV +CL+++ +N+ FI+ AA EHC+ +A H GC +
Sbjct: 500 NSLSPHIVPLSRDLNGNHVVQKCLQELKAEDNQ--FIFDAASEHCIEIATHRHGCCVLQR 557
Query: 267 FIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
+D +RKQ+ ++ NA LS + GNYVVQ+VL D I + +R + I L
Sbjct: 558 CLDHGNSSQRKQLSLKVAENATKLSLDPFGNYVVQYVLSRGDEESITIVLNHIRANVISL 617
Query: 327 SLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
SL K GS V++ L+ N ++ L NSD+ + D +GNYV+QT+L
Sbjct: 618 SLHKFGSNVIEKSLRINKLTNEVIAVLLENSDKFSMLLNDAFGNYVLQTSL 668
>gi|83765714|dbj|BAE55857.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 641
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 156/294 (53%), Gaps = 20/294 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL + + +F+ +++ + + ++ K +E N++Q
Sbjct: 243 LCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQ-- 300
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V+ ++++ G+ +++K+++ ++ P V+ AL+ L+ G
Sbjct: 301 RTALINNAAHQL-VKIALNQHGTRALQKMIEFIST-PEQTQTVIHALEDHVVELVQDLNG 358
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A +C+ + H GC + ID G +R +++
Sbjct: 359 NHVIQKCLNRLSAEDAQ--FIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQ 416
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ NA +L ++ GNYVVQ++L+L +P+ E +C + RG+ LS K S V++ CL+
Sbjct: 417 ITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCLRT 476
Query: 343 R--ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++EE +L+ ++ ++ D + NYV+QTA LI+ +RP
Sbjct: 477 ADGPVRGQLIEE-MLSGSELEKMLRDSFANYVVQTAMDFADSETRTRLIDAIRP 529
>gi|189195174|ref|XP_001933925.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979804|gb|EDU46430.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1009
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 153/296 (51%), Gaps = 18/296 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL + + +F+ + +++ + + ++ K +E CN++
Sbjct: 596 IYGLCKDQHGCRFLQKKLEERNPEHIQIIFDETALHVVELMTDPFGNYLCQKLLEYCNDE 655
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + TS VQ + ++ G+ +++K+++ ++ ++++AL L+
Sbjct: 656 QRNTLVRNATS---AMVQIAFNQHGTRALQKMIEFISTDE-QTQMIIQALSGEVVDLIQD 711
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + + + FI+ A EHC+ + H GC + ID G ++ +
Sbjct: 712 LNGNHVIQKCLNHL--KSPEAQFIFDAVGEHCVVVGTHRHGCCVLQRCIDHASGFQKVDL 769
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ ++ L ++ GNYV+Q++L+L D +C +G +LS+ K S V++ C
Sbjct: 770 IRKITAHSFQLVQDPFGNYVIQYILDLNDASFTTPMCQGFQGKICELSMQKFSSNVIEKC 829
Query: 340 LK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++ V ++ E LL+ +Q+ + D +GNYVIQTA LIE MRP
Sbjct: 830 IRCAEPQVKAMMIEELLDVEQLNSLMRDSFGNYVIQTALEFAPAELCMHLIEMMRP 885
>gi|238483549|ref|XP_002373013.1| RNA-binding protein, putative [Aspergillus flavus NRRL3357]
gi|220701063|gb|EED57401.1| RNA-binding protein, putative [Aspergillus flavus NRRL3357]
Length = 911
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 156/294 (53%), Gaps = 20/294 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL + + +F+ +++ + + ++ K +E N++Q
Sbjct: 513 LCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQ-- 570
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V+ ++++ G+ +++K+++ ++ P V+ AL+ L+ G
Sbjct: 571 RTALINNAAHQL-VKIALNQHGTRALQKMIEFIST-PEQTQTVIHALEDHVVELVQDLNG 628
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A +C+ + H GC + ID G +R +++
Sbjct: 629 NHVIQKCLNRLSAEDAQ--FIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQ 686
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ NA +L ++ GNYVVQ++L+L +P+ E +C + RG+ LS K S V++ CL+
Sbjct: 687 ITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCLRT 746
Query: 343 R--ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++EE +L+ ++ ++ D + NYV+QTA LI+ +RP
Sbjct: 747 ADGPVRGQLIEE-MLSGSELEKMLRDSFANYVVQTAMDFADSETRTRLIDAIRP 799
>gi|328768244|gb|EGF78291.1| hypothetical protein BATDEDRAFT_37298 [Batrachochytrium
dendrobatidis JAM81]
Length = 636
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 196/416 (47%), Gaps = 50/416 (12%)
Query: 1 METSRTHPVSETQLNNLSLSFENLQVNDPSYSSFNEIHPSPPVPLYPQSTWAVPSLSGR- 59
M++S ++P+ NN S+ F N N S S I P LY QS +SG
Sbjct: 149 MQSSLSNPIGINNTNN-SMQF-NPNANALSMSG---ISPQTAAALYSQS-----GMSGMN 198
Query: 60 -------STVP-NLSGTSNPQYETITSSNFQTPLGFQANPFQHCAN--SGILL------- 102
S +P N G + + F L Q Q A+ S I+L
Sbjct: 199 NGFNMMYSGLPYNAQGLPFANMSNLNALKFHATLQKQKKHSQEEASRFSSIMLEDLVGQI 258
Query: 103 --LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
L++D+ G +YLQ KL + + LD ++ + +++ + + ++ K +E C E+Q
Sbjct: 259 SVLSKDQHGCRYLQRKLEEQNEKHLDMIYVEIFPNFAELMTDPFGNYLCQKLLEYCTEEQ 318
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
+ + S++ G+ +++KL++ ++ + V++AL L+
Sbjct: 319 RNMLVEHVAPD---LAAVSLNMHGTRAVQKLIEFLSTHHQI-STVVRALALNVVSLIKDL 374
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ V+ +CL ++ H NN+ FIY A +HC +A H GC + ID +R Q++
Sbjct: 375 NGNHVIQKCLNRLSHENNQ--FIYNAVRKHCTEIATHRHGCCVLQRCIDHASDSQRVQLV 432
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
I+ +A +L ++ GNYVVQ+VL+L + E I G+ LS+ K S V++ C+
Sbjct: 433 AEITYHALTLVQDPFGNYVVQYVLDLAEIKFSEAIVHRFLGNICLLSVQKFSSNVIEKCI 492
Query: 341 KYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
+ T +++E LLN +++ ++ D Y NYV+QT+ L+E +RP
Sbjct: 493 RVASSETRALLIDE-LLNKERLDKLLRDSYANYVVQTSLDYAEPAQRLQLVECIRP 547
>gi|297809043|ref|XP_002872405.1| hypothetical protein ARALYDRAFT_351970 [Arabidopsis lyrata subsp.
lyrata]
gi|297318242|gb|EFH48664.1| hypothetical protein ARALYDRAFT_351970 [Arabidopsis lyrata subsp.
lyrata]
Length = 433
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 156/314 (49%), Gaps = 12/314 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+L A+D S+ LQ+ + G +DK+F+ + +++ + + VF K +E C ++
Sbjct: 122 LLSRAKDRIESRLLQDVIAKGSKETIDKIFDNLISNVCELMLDPFGHRVFEKLMEKCTDE 181
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q+ R+ + Q FV+ VD G+ +I+ LM+++ + + M L + LL
Sbjct: 182 QITRVLDIVLQQPLQFVRLCVDSHGTRAIQDLMRSLCSVEQIARF-MATLCHVALLLTKD 240
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ V+L C +++ ++ + +++C +A + G +N I + R +
Sbjct: 241 ANANLVILFCFNHFSPSHSR--YLLEVIVQNCYQVAIDQHGYCMLNQCIRQSSRELRDPL 298
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I N L +N GNYVVQ+VL+LED + + L G+Y+ LS K GS VVQ C
Sbjct: 299 IKEIITNVVRLCKNCYGNYVVQYVLDLEDCEVTSALSKHLDGNYVQLSYDKYGSHVVQKC 358
Query: 340 LKYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
L+ R I+ E L + D + D +GNYVIQTA I + H+ L+ + +
Sbjct: 359 LENREFCSRRIIAELLSDIDSLL---VDPFGNYVIQTAWIVS----EDHMRNVLLYHINR 411
Query: 399 NLDSLRFG-YGKHV 411
N+ +R YG+ +
Sbjct: 412 NVSFMRCNVYGRKL 425
>gi|391870982|gb|EIT80151.1| RNA-binding protein, putative [Aspergillus oryzae 3.042]
Length = 992
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 156/294 (53%), Gaps = 20/294 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL + + +F+ +++ + + ++ K +E N++Q
Sbjct: 594 LCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQ-- 651
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V+ ++++ G+ +++K+++ ++ P V+ AL+ L+ G
Sbjct: 652 RTALINNAAHQL-VKIALNQHGTRALQKMIEFIST-PEQTQTVIHALEDHVVELVQDLNG 709
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A +C+ + H GC + ID G +R +++
Sbjct: 710 NHVIQKCLNRLSAEDAQ--FIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQ 767
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ NA +L ++ GNYVVQ++L+L +P+ E +C + RG+ LS K S V++ CL+
Sbjct: 768 ITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCLRT 827
Query: 343 R--ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++EE +L+ ++ ++ D + NYV+QTA LI+ +RP
Sbjct: 828 ADGPVRGQLIEE-MLSGSELEKMLRDSFANYVVQTAMDFADSETRTRLIDAIRP 880
>gi|317141237|ref|XP_001817859.2| RNA-binding protein [Aspergillus oryzae RIB40]
Length = 992
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 156/294 (53%), Gaps = 20/294 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL + + +F+ +++ + + ++ K +E N++Q
Sbjct: 594 LCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQ-- 651
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V+ ++++ G+ +++K+++ ++ P V+ AL+ L+ G
Sbjct: 652 RTALINNAAHQL-VKIALNQHGTRALQKMIEFIST-PEQTQTVIHALEDHVVELVQDLNG 709
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A +C+ + H GC + ID G +R +++
Sbjct: 710 NHVIQKCLNRLSAEDAQ--FIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQ 767
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ NA +L ++ GNYVVQ++L+L +P+ E +C + RG+ LS K S V++ CL+
Sbjct: 768 ITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCLRT 827
Query: 343 R--ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++EE +L+ ++ ++ D + NYV+QTA LI+ +RP
Sbjct: 828 ADGPVRGQLIEE-MLSGSELEKMLRDSFANYVVQTAMDFADSETRTRLIDAIRP 880
>gi|302923594|ref|XP_003053709.1| hypothetical protein NECHADRAFT_65753 [Nectria haematococca mpVI
77-13-4]
gi|256734650|gb|EEU47996.1| hypothetical protein NECHADRAFT_65753 [Nectria haematococca mpVI
77-13-4]
Length = 829
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 176/325 (54%), Gaps = 18/325 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL ++ + ++ ++ +++ + + ++ K +E CN+D
Sbjct: 365 IYDLCKDQHGCRYLQKKLEERNAEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 424
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + +Q SQD V+ ++++ G+ +++K+++ V+ P + L+++AL+ FR++ +
Sbjct: 425 ERT-VLIQNASQD--MVRIALNQHGTRALQKMIEYVST-PQQVHLIIEALR--FRVVELI 478
Query: 220 KP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +CL ++ + + FI+ A +C+ + H GC + ID G ++
Sbjct: 479 QDLNGNHVIQKCLNKLTAPDAQ--FIFDAVGHNCIEVGTHRHGCCVLQRCIDHASGDQKL 536
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ I+ +A L ++ GNYVVQ++++L +P E I +G LS K S V++
Sbjct: 537 WLIQRITEHARVLVQDPFGNYVVQYIIDLNEPTFTEPIVGMFQGCISQLSRHKFSSNVIE 596
Query: 338 NCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
CL+ + + IVEE LL ++ R+ D + NYVIQTAL E P H +LV
Sbjct: 597 KCLRCAQAPSKDMIVEE-LLGPQEMERLLRDSFANYVIQTAL-EYATP---HQKYQLVES 651
Query: 396 LQQNLDSLR-FGYGKHVYNFIKDCD 419
++ L +R YG+ + I D
Sbjct: 652 IRPILPQIRTTPYGRRIQAKISAFD 676
>gi|357152596|ref|XP_003576172.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like
[Brachypodium distachyon]
Length = 506
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 162/313 (51%), Gaps = 10/313 (3%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A+D+ G ++LQ++L G R +D VF V+ ++ N + ++ K + C+ +Q +
Sbjct: 196 VARDQHGCRFLQQRLDDG-KREVDFVFAGVARHAVDLMVNPFGNYLMQKLLAVCDREQRM 254
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+ +T + V+ S++ G+ +++KL++++ R + LV+ AL+ F L+ G
Sbjct: 255 ALVRALTKDPFVLVRISLNVHGTRAVQKLIESLRTREEI-QLVVAALRPGFLELIKDPNG 313
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV +CL+ +NK I+ AA +CL + GC + I G +++++
Sbjct: 314 NHVVQKCLQAFEADDNKP--IFAAAAIYCLDIGMQCHGCCVLQRCIARSTGEHKEKLVAA 371
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK- 341
I+ N L+++ GNYVVQ+V+EL+ ++ G YI LS+ K S VV+ CLK
Sbjct: 372 IARNGFELAQDAYGNYVVQYVIELKVATANASLAQQFEGKYIHLSMQKFSSNVVEKCLKV 431
Query: 342 YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLD 401
++ + LL + R+ Y NYV+ +AL + + LH L ++ +++
Sbjct: 432 FKEADKATIILELLAAPHFERLLQHPYANYVVYSAL----QNSKGSLHSALTNAIRPHVE 487
Query: 402 SLRFG-YGKHVYN 413
LR Y K +Y+
Sbjct: 488 LLRTSPYCKRIYS 500
>gi|374109827|gb|AEY98732.1| FAGL086Cp [Ashbya gossypii FDAG1]
Length = 735
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 153/304 (50%), Gaps = 13/304 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ +L +F + +++ + + ++ K +E + +Q
Sbjct: 419 LCKDQHGCRFLQRQLDVAGPDAATSIFEETKPYVVELMTDSFGNYLIQKLVERVSAEQ-- 476
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RITL +S DQ FV ++D G+ +++KL++ ++ +++ +LK L G
Sbjct: 477 RITLVKSSADQ-FVSIALDPHGTRALQKLVECISTEE-ESRIIIASLKNSVVQLSKDLNG 534
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV +CL++ +++ FI+ AA C+ +A H GC + +D +R Q+
Sbjct: 535 NHVVQKCLQKFSSADSQ--FIFDAACADCVKIATHRHGCCVLQRCLDYGSDQQRDQLCAQ 592
Query: 283 ISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ N +L+ + GNYVVQ++L EL P I +L+ I+LSL K GS VV+
Sbjct: 593 VLANVDALTLDPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIELSLHKFGSNVVEK 652
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
L+ ++ E L Q + ++ D +GNYV+QTAL + NS L+ RL L
Sbjct: 653 ILRTSAVAELMISELLATGGQPGVEQLLHDGFGNYVLQTALDVSKAANSF-LYTRLTDLL 711
Query: 397 QQNL 400
+ L
Sbjct: 712 KPAL 715
>gi|302309271|ref|NP_986580.2| AGL086Cp [Ashbya gossypii ATCC 10895]
gi|299788279|gb|AAS54404.2| AGL086Cp [Ashbya gossypii ATCC 10895]
Length = 735
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 153/304 (50%), Gaps = 13/304 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ +L +F + +++ + + ++ K +E + +Q
Sbjct: 419 LCKDQHGCRFLQRQLDVAGPDAATSIFEETKPYVVELMTDSFGNYLIQKLVERVSAEQ-- 476
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RITL +S DQ FV ++D G+ +++KL++ ++ +++ +LK L G
Sbjct: 477 RITLVKSSADQ-FVSIALDPHGTRALQKLVECISTEE-ESRIIIASLKNSVVQLSKDLNG 534
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV +CL++ +++ FI+ AA C+ +A H GC + +D +R Q+
Sbjct: 535 NHVVQKCLQKFSSADSQ--FIFDAACADCVKIATHRHGCCVLQRCLDYGSDQQRDQLCAQ 592
Query: 283 ISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ N +L+ + GNYVVQ++L EL P I +L+ I+LSL K GS VV+
Sbjct: 593 VLANVDALTLDPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIELSLHKFGSNVVEK 652
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
L+ ++ E L Q + ++ D +GNYV+QTAL + NS L+ RL L
Sbjct: 653 ILRTSAVAELMISELLATGGQPGVEQLLHDGFGNYVLQTALDVSKAANSF-LYTRLTDLL 711
Query: 397 QQNL 400
+ L
Sbjct: 712 KPAL 715
>gi|255555215|ref|XP_002518644.1| Pumilio domain-containing protein C6G9.14, putative [Ricinus
communis]
gi|223542025|gb|EEF43569.1| Pumilio domain-containing protein C6G9.14, putative [Ricinus
communis]
Length = 644
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 144/283 (50%), Gaps = 11/283 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ ++A+D+ G ++LQ+K+ + +F V + + +I +Q+A ++ K CN
Sbjct: 317 MAMVARDQDGCRFLQKKVEELIPEQTEMIFLEVKDHLYDLIVDQFANYLVQKLFLACNGV 376
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q+ ++ L + + + G+ +++K+++ + N P ++ AL + L
Sbjct: 377 QINQLLLSLVQNGERLKNICIHMHGTRAMQKIIEIINNYPEQKASLVSALGNITVYLAKN 436
Query: 220 KPGSSVVLQCL---EQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
G V+ QCL E Y ++ + C+ +A + GC + +D G +
Sbjct: 437 HNGHHVIQQCLKCFEVEY-----TQYLLAEIAQSCIEIARDKSGCCVLQKALDSSYGELK 491
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ + I+ NA+ LS + GNYVVQ+VL++ P+ TI LRG +++LS+ K GS VV
Sbjct: 492 ECFITTITANASVLSVDPYGNYVVQYVLQMHIPHAEATILEQLRGQFVNLSMDKFGSNVV 551
Query: 337 QNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ CLK I IV+E L +S I RV +GNYV Q+AL
Sbjct: 552 EKCLKECNEINAAGIVQE-LADSPSILRVLQHPFGNYVAQSAL 593
>gi|281204898|gb|EFA79092.1| Conserved hypothetical protein [Polysphondylium pallidum PN500]
Length = 1346
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 167/321 (52%), Gaps = 16/321 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL GD + +F V E+ +++ + + ++ K +E CN+
Sbjct: 1029 IYPLCRDQHGCRFLQKKLEDGDEPLTEIIFKEVCEYMLELMTDPFGNYLCQKLLEHCNDR 1088
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L I ++ V+ S++ G+ +++K+++ + P + L+ K+L L+
Sbjct: 1089 QRLMIIDKVGPD---IVRISMNMHGTRAVQKMIEFLTT-PEQIALIKKSLANYVVPLIQD 1144
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQA--ALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL ++ +N+ FIY + + +C+ +A H GC + ID ++
Sbjct: 1145 LNGNHVIQKCLNKLSPPDNQ--FIYDSVSSSANCIAVATHRHGCCVLQRCIDHASESQKF 1202
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
Q++ + N+ L ++ GNYVVQ+VL+L P L + G+ L+ K S VV+
Sbjct: 1203 QLINEVISNSLVLVQDPFGNYVVQYVLDLPFPGLATEMAKRFLGNVPILATQKFSSNVVE 1262
Query: 338 NCLKYR--ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
CL +T +++E +++ D + + D + NYVIQT+L P H H +LV
Sbjct: 1263 KCLHVADPMTRGNLIQE-IIDCDILHNLLQDPFANYVIQTSLT-IAEP---HQHTKLVEA 1317
Query: 396 LQQNLDSLR-FGYGKHVYNFI 415
++ +L L+ YGK + N I
Sbjct: 1318 IRPHLPMLKNTPYGKRIQNKI 1338
>gi|361131374|gb|EHL03072.1| putative Pumilio domain-containing protein C6G9.14 [Glarea
lozoyensis 74030]
Length = 626
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 171/320 (53%), Gaps = 14/320 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN++
Sbjct: 207 IYNLCKDQHGCRYLQKKLEDRNPDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDE 266
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ T+ I + V+ ++++ G+ +++K+++ ++ +++++++LK L+
Sbjct: 267 ER---TVLIENASHDLVRIALNQHGTRALQKMIEFISTET-QINIIIRSLKNRVVELIQD 322
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ ++ FI+ A HC+ + H GC + ID G ++ +
Sbjct: 323 LNGNHVIQKCLNRLTAQ--QSQFIFDAVGIHCIDVGTHRHGCCVLQRCIDHASGDQKSWL 380
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS NA L ++ GNYVVQ++L+L +P E + +G LS K S V++ C
Sbjct: 381 IRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFQGRVGQLSKQKFSSNVIEKC 440
Query: 340 LK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L+ + + ++EE +L ++ R+ D + NYVIQTAL + P + RL+ ++
Sbjct: 441 LRCAKEPSKDMLIEE-MLQPTELDRLLRDSFANYVIQTAL-DYANP---AMKTRLIEAIR 495
Query: 398 QNLDSLR-FGYGKHVYNFIK 416
+L ++R YG+ + I+
Sbjct: 496 PHLPAIRTTPYGRRIQAKIQ 515
>gi|322696542|gb|EFY88333.1| RNA-binding protein, putative [Metarhizium acridum CQMa 102]
Length = 1012
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 175/325 (53%), Gaps = 18/325 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN+D
Sbjct: 581 IYELCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 640
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + +Q SQD V+ ++++ G+ +++K+++ V+ P + L+++AL+ FR++ +
Sbjct: 641 ERT-VLIQNASQD--MVRIALNQHGTRALQKMIEYVST-PQQVHLIIEALR--FRVVELI 694
Query: 220 KP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +CL ++ + + FI+ A +C+ + H GC + ID G ++
Sbjct: 695 QDLNGNHVIQKCLNKLTSLDAQ--FIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGEQKP 752
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ I+ +A L ++ GNYVVQ++++L +P E + +G LS K S V++
Sbjct: 753 WLVGRITEHARILVQDPFGNYVVQYIIDLNEPSFTEPMVAMFQGCISQLSRHKFSSNVIE 812
Query: 338 NCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
CL+ + + IVEE LL ++ R+ D + NYVIQTAL E P H RLV
Sbjct: 813 KCLRCSQAPSKDMIVEE-LLAPQEMERLLRDSFANYVIQTAL-EFATP---HQKYRLVES 867
Query: 396 LQQNLDSLRFG-YGKHVYNFIKDCD 419
++ L +R YG+ + + D
Sbjct: 868 IRPILPQIRTTPYGRRIQAKVSAYD 892
>gi|403362771|gb|EJY81119.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 1066
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 157/315 (49%), Gaps = 13/315 (4%)
Query: 102 LLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
+LA+D+ G ++LQ K+ + +DK+F E ++ + + ++ K ET EDQL
Sbjct: 537 VLAKDQGGCRFLQRKIEENNREVVDKIFRHTIENFMDLMNDPFGNYLAQKLTETVREDQL 596
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKP 221
I ++ V + G+ SI+K+++ V + P ++L+ LK + L
Sbjct: 597 TEIIHKVQEDP---VGLCRNSHGTRSIQKIIETVKS-PAQIELLANYLKEKVQELAEDIN 652
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G+ V+ + L +N FIY A +E C+ +ACH+ GC M ID ++ ++
Sbjct: 653 GNHVIQKIL--FTWKPAQNQFIYNAMMEKCVEIACHKHGCCVMQKCIDGATPQQKLELTL 710
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I + RN GNYVVQ+VLEL+ + + I L G + L + K S V++ CL+
Sbjct: 711 RIGDHTQVFVRNPYGNYVVQYVLELKMVEVNQRIGEKLLGSLLLLGMEKFSSNVIEKCLE 770
Query: 342 YRIT-VNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNL 400
+ T V + +L +D + D+YGNYVIQ +L + P + + KL+ ++
Sbjct: 771 HNATNVKEAMVREILQADSFYDFLLDQYGNYVIQKSLSVAVEP----YFSQFIEKLRPDI 826
Query: 401 DSLRFG--YGKHVYN 413
+ LR +G ++N
Sbjct: 827 ERLRHSNEFGLKIFN 841
>gi|322710722|gb|EFZ02296.1| RNA-binding protein, putative [Metarhizium anisopliae ARSEF 23]
Length = 1023
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 175/325 (53%), Gaps = 18/325 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN+D
Sbjct: 591 IYELCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 650
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + +Q SQD V+ ++++ G+ +++K+++ V+ P + L+++AL+ FR++ +
Sbjct: 651 ERT-VLIQNASQD--MVRIALNQHGTRALQKMIEYVST-PQQVHLIIEALR--FRVVELI 704
Query: 220 KP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +CL ++ + + FI+ A +C+ + H GC + ID G ++
Sbjct: 705 QDLNGNHVIQKCLNKLTSLDAQ--FIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGEQKP 762
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ I+ +A L ++ GNYVVQ++++L +P E + +G LS K S V++
Sbjct: 763 WLVGRITEHARILVQDPFGNYVVQYIIDLNEPSFTEPMVAMFQGCISQLSRHKFSSNVIE 822
Query: 338 NCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
CL+ + + IVEE LL ++ R+ D + NYVIQTAL E P H RLV
Sbjct: 823 KCLRCSQAPSKDMIVEE-LLAPQEMERLLRDSFANYVIQTAL-EFATP---HQKYRLVES 877
Query: 396 LQQNLDSLRFG-YGKHVYNFIKDCD 419
++ L +R YG+ + + D
Sbjct: 878 IRPILPQIRTTPYGRRIQAKVSAYD 902
>gi|398407841|ref|XP_003855386.1| pumilio-related RNA binding protein [Zymoseptoria tritici IPO323]
gi|339475270|gb|EGP90362.1| pumilio-related RNA binding protein [Zymoseptoria tritici IPO323]
Length = 1060
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 169/328 (51%), Gaps = 24/328 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ KL + + + +F V +++ + + ++ K +E+ N+D
Sbjct: 618 IYTLCKDQHGCRFLQRKLEERNEQTVQAIFEEVRNHMIELMVDPFGNYLCQKLLESANDD 677
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q + ++++ G+ +++K+++ ++ P L+++AL+ LL+
Sbjct: 678 QRTELIKNAMPQ---MTKIALNQHGTRALQKMIEFIST-PEQTALIIEALRNDVVLLIQD 733
Query: 220 KPGSSVVLQCLEQIYHHNNKND--FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL +H + ND FI+ A +C+ + H GC + ID G ++
Sbjct: 734 LNGNHVIQKCL----NHLSSNDAIFIFDAVGANCITVGTHRHGCCVLQRCIDHADGLQKG 789
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
+++ + NA SL ++ GNYVVQ++L+L +P E +C + G +LS K S V++
Sbjct: 790 EMVDHVIRNAYSLVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEIANLSRQKFSSNVME 849
Query: 338 NCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL---IETMRPNSLHLHQRL 392
C++ T I+ E ++ I ++ D + NYV+QTA+ E ++P L
Sbjct: 850 KCIRCASNETKRAIISE-IMAPQTIEKMLRDGFANYVVQTAMDFADEDLKPT-------L 901
Query: 393 VTKLQQNLDSLR-FGYGKHVYNFIKDCD 419
V ++ + ++R +G+ + + I D D
Sbjct: 902 VENIRMVIPAIRNTPHGRRIQSKISDYD 929
>gi|356518481|ref|XP_003527907.1| PREDICTED: putative pumilio homolog 10-like [Glycine max]
Length = 668
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 159/301 (52%), Gaps = 9/301 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +A+D+ G ++LQ + G + + VF + +++ + + ++ K ++ C +D
Sbjct: 356 IYNMAKDQNGCRFLQRMVAEGTYQDICMVFEGIIGNVVELMIDSFGNYLVQKLLDVCTDD 415
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L+I L +T+ V+ S++ G+ ++KL++ + + + LV A++ F L+
Sbjct: 416 QRLQIVLMLTNHPAQLVRVSLNTHGTRVVQKLIETLTSTE-QVSLVKSAIQPGFLDLIKD 474
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ ++ +CL+ + +N+ FI+ AA++ C+ +A H+ GC + I G R ++
Sbjct: 475 LNGNHLIQRCLQCLSCQDNQ--FIFDAAVKFCVEIATHQHGCFVLQRCIHHSVGKNRDKL 532
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I + L+++ GNYVVQ+V+E + + + + +++ LS K S VV+ C
Sbjct: 533 VTEICKHGLLLAQDAFGNYVVQYVIESDTAAVSAKLLSQFKENFVMLSTQKFSSHVVEKC 592
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRP------NSLHLHQRLV 393
L++ + LL+ + ++ D+Y NYVIQ+AL+ T P ++ LH+ L
Sbjct: 593 LQHIGDSRSRIVRELLSVPRFEQLLQDQYANYVIQSALLFTKGPLHASLAEAVRLHKTLC 652
Query: 394 T 394
T
Sbjct: 653 T 653
>gi|409083297|gb|EKM83654.1| hypothetical protein AGABI1DRAFT_88582 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 979
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 183/386 (47%), Gaps = 32/386 (8%)
Query: 42 PVPLYPQSTWAVPSLSGRSTVP---NLSGTSNPQYETITSSNFQTPLGFQANPFQHCANS 98
P P+ + + + S ++ P ++G P++ F G + Q
Sbjct: 483 PHQTAPRYSLGIGARSASASSPQDGKMNGLHGPKHRREIDREFNRFAGTRLEDLQ----G 538
Query: 99 GILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNE 158
I L +D+ G +YLQ+KL G D +F +++ + + ++ K +E +
Sbjct: 539 EIPTLCKDQHGCRYLQKKLEEGLPDHRDMIFRETFNHFHELMTDPFGNYLCQKLLEFATD 598
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
+Q I + Q V S++ G+ +++K++ ++ R + +++ AL L+
Sbjct: 599 EQRNLICESVA---QELVNISLNMHGTRAVQKMIDFLSTRRQIHSIIL-ALSLHVVALIK 654
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + ID +R Q
Sbjct: 655 DLNGNHVIQKCLNKLAPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCIDHASEHQRIQ 712
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
++ I+ NA +L ++ GNYVVQ++L+L D + + +G+ LS+ K S V++
Sbjct: 713 LVNEITYNALTLVQDPYGNYVVQYILDLNDSRFSDAVIRQFQGNVCALSVQKFSSNVIEK 772
Query: 339 CLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP-- 383
C++ T +++E LLN ++ ++ D YGNY +QTA L+E +RP
Sbjct: 773 CVRVAEHSTRKLLIDE-LLNRSRLEKLLRDSYGNYCVQTALDYAEPAQRALLVEGIRPVL 831
Query: 384 ---NSLHLHQRLVTKLQQNLDSLRFG 406
+ +R+ KLQ+ S+ +G
Sbjct: 832 PLIRNTPYGKRIQNKLQREAQSIEYG 857
>gi|320162710|gb|EFW39609.1| RNA-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1111
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 161/331 (48%), Gaps = 21/331 (6%)
Query: 67 GTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLD 126
G PQ S GF+ + A I L +D+ G ++LQ K+ + +
Sbjct: 747 GKGAPQGAPAKSHKRAPSEGFRYTTIEQAAGK-IYSLCKDQIGCRFLQRKIEEQNESVIQ 805
Query: 127 KVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSS 186
+F+ V E +++ + + ++ K +E C E Q I ++ + V S++ G+
Sbjct: 806 IIFDEVFEHVGELMTDPFGNYLCQKLLEHCTEAQRTAIVQRVAPE---LVSISLNMHGTR 862
Query: 187 SIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQA 246
+++KL + + R ++LV+ A + L+ G+ V+ +CL++ +N+ FIY A
Sbjct: 863 AVQKLTECLKERG-QIELVISAFRDAVVTLIKDLNGNHVIQRCLQRFSAADNQ--FIYDA 919
Query: 247 ALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLEL 306
+C+ +A H GC M ID ++ Q++ ++ + +L ++ GNYVVQ+VL+L
Sbjct: 920 VASNCVQVATHRHGCCVMQRCIDNATEAQKHQLVNEVTFHVLNLVQDPFGNYVVQYVLDL 979
Query: 307 EDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR--ITVNYIVEEFLLNSDQIFRVA 364
P + + G+ L++ K S V++ CL+ T ++ E LL+ + R+
Sbjct: 980 NIPRFSDALVNQFLGNICPLAIQKFSSNVIEKCLRASEPATRTTMMLE-LLDERWLPRLL 1038
Query: 365 CDKYGNYVIQTAL-----------IETMRPN 384
D +GNYVIQTAL +E +RP+
Sbjct: 1039 QDPFGNYVIQTALGIGDAQQLNIMVEGIRPH 1069
>gi|426201649|gb|EKV51572.1| hypothetical protein AGABI2DRAFT_114299 [Agaricus bisporus var.
bisporus H97]
Length = 975
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 183/386 (47%), Gaps = 32/386 (8%)
Query: 42 PVPLYPQSTWAVPSLSGRSTVP---NLSGTSNPQYETITSSNFQTPLGFQANPFQHCANS 98
P P+ + + + S ++ P ++G P++ F G + Q
Sbjct: 479 PHQTAPRYSLGIGARSASASSPQDGKMNGLHGPKHRREIDREFNRFAGTRLEDLQ----G 534
Query: 99 GILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNE 158
I L +D+ G +YLQ+KL G D +F +++ + + ++ K +E +
Sbjct: 535 EIPTLCKDQHGCRYLQKKLEEGLPDHRDMIFRETFNHFHELMTDPFGNYLCQKLLEFATD 594
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
+Q I + Q V S++ G+ +++K++ ++ R + +++ AL L+
Sbjct: 595 EQRNLICESVA---QELVNISLNMHGTRAVQKMIDFLSTRRQIHSIIL-ALSLHVVALIK 650
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + ID +R Q
Sbjct: 651 DLNGNHVIQKCLNKLAPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCIDHASEHQRIQ 708
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
++ I+ NA +L ++ GNYVVQ++L+L D + + +G+ LS+ K S V++
Sbjct: 709 LVNEITYNALTLVQDPYGNYVVQYILDLNDSRFSDAVIRQFQGNVCALSVQKFSSNVIEK 768
Query: 339 CLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP-- 383
C++ T +++E LLN ++ ++ D YGNY +QTA L+E +RP
Sbjct: 769 CVRVAEHSTRKLLIDE-LLNRSRLEKLLRDSYGNYCVQTALDYAEPAQRALLVEGIRPVL 827
Query: 384 ---NSLHLHQRLVTKLQQNLDSLRFG 406
+ +R+ KLQ+ S+ +G
Sbjct: 828 PLIRNTPYGKRIQNKLQREAQSIEYG 853
>gi|169596899|ref|XP_001791873.1| hypothetical protein SNOG_01219 [Phaeosphaeria nodorum SN15]
gi|160707392|gb|EAT90868.2| hypothetical protein SNOG_01219 [Phaeosphaeria nodorum SN15]
Length = 1017
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 171/320 (53%), Gaps = 12/320 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL L +F+ + +++ + + ++ K +E N++
Sbjct: 604 IYSLCKDQHGCRFLQKKLEERVPESLQIIFDETAPHVVELMTDPFGNYLCQKLLEFANDE 663
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R TL + + V ++++ G+ +++K+++ ++ +++++AL L+
Sbjct: 664 Q--RNTL-VRNACPAMVSIALNQHGTRALQKMIEFISTEE-QTEMIIQALSGQVVDLIQD 719
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + +++ FI+ A EHC+ + H GC + ID G ++ +
Sbjct: 720 LNGNHVIQKCLNHL--KSSEAQFIFDAVGEHCVIVGTHRHGCCVLQRCIDHASGYQKVDL 777
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ ++ L ++ GNYVVQ++L+L D +C RG ++LS K S V++ C
Sbjct: 778 VRKITAHSFHLVQDPFGNYVVQYILDLNDAAFTTPMCEGFRGKVVELSKQKFSSNVIEKC 837
Query: 340 LK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
++ ++ ++ E L + +++ + D YGNYV+QTAL P +L +H L+ ++
Sbjct: 838 IRCAEMSAKQMLIEELCDVEELEHLMRDSYGNYVVQTAL--EFAPPALCIH--LIEIMRP 893
Query: 399 NLDSLR-FGYGKHVYNFIKD 417
L S+R YG+ + + +++
Sbjct: 894 ILPSIRQTPYGRRIQSKVQE 913
>gi|380483203|emb|CCF40767.1| pumilio domain-containing protein [Colletotrichum higginsianum]
Length = 446
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 169/317 (53%), Gaps = 14/317 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN+D+
Sbjct: 19 LCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDER- 77
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
T+ I + V+ ++++ G+ +++K+++ V P + +++ AL+ L+ G
Sbjct: 78 --TVLIQNAAVDMVRIALNQHGTRALQKMIEFVTT-PTQIGMIINALRFQVVELIQDLNG 134
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FI+ A +C+ + H GC + ID G ++ ++
Sbjct: 135 NHVIQKCLNKLSALDAQ--FIFDAVGTNCVDVGTHRHGCCVLQRCIDHASGEQKVWLIAK 192
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK- 341
I+ +A L ++ GNYVVQ++++L +P E I + LS K S V++ CL+
Sbjct: 193 ITEHAPILVQDPFGNYVVQYIIDLNEPTFTEPIVRMFKNRIGQLSRHKFSSNVIEKCLRC 252
Query: 342 -YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNL 400
+ + IVEE LL+ +I R+ D Y NYVIQTAL E P+S + RLV ++ L
Sbjct: 253 SQEPSRDMIVEE-LLSPGEIERLLRDSYANYVIQTAL-EYATPHSKY---RLVDAIRPIL 307
Query: 401 DSLR-FGYGKHVYNFIK 416
++R YG+ + I+
Sbjct: 308 PAIRSTPYGRRIQAKIQ 324
>gi|358378205|gb|EHK15887.1| hypothetical protein TRIVIDRAFT_164108, partial [Trichoderma virens
Gv29-8]
Length = 751
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 174/325 (53%), Gaps = 20/325 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN+D
Sbjct: 328 IYELCKDQHGCRYLQKKLEEREGDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 387
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + +Q S+D V+ ++++ G+ +++K+++ V+ P + L+++AL+ FR++ +
Sbjct: 388 ERT-VLIQNASKD--MVRIALNQHGTRALQKMIEYVST-PQQVHLIIEALR--FRVVELI 441
Query: 220 KP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +CL ++ + + FI+ A +C+ + H GC + ID G ++
Sbjct: 442 QDLNGNHVIQKCLNKLTASDAQ--FIFDAVGNNCVEVGTHRHGCCVLQRCIDHATGQQKL 499
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ I+ +A L ++ GNYVVQ++++L +P E I + +G LS K S V++
Sbjct: 500 WLIQRITEHARILVQDPFGNYVVQYIIDLNEPTFTEPIVATFQGCISQLSRHKFSSNVIE 559
Query: 338 NCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
CL+ + + IVEE L ++ R D + NYVIQTAL + + H RLV
Sbjct: 560 KCLRCAQAPSKDMIVEEILNEMERFLR---DSFANYVIQTALDFS----TPHQKYRLVEA 612
Query: 396 LQQNLDSLRFG-YGKHVYNFIKDCD 419
++ L +R YG+ + I D
Sbjct: 613 IRPILPQVRTTPYGRRIQAKIAAYD 637
>gi|255715081|ref|XP_002553822.1| KLTH0E07876p [Lachancea thermotolerans]
gi|238935204|emb|CAR23385.1| KLTH0E07876p [Lachancea thermotolerans CBS 6340]
Length = 710
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 157/304 (51%), Gaps = 13/304 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
IL L +D+ G ++LQ +L G + ++ ++ +++ + + ++ K +E +D
Sbjct: 391 ILSLCKDQHGCRFLQRQLDIGGCNAANSIYLETRDYVVELMTDSFGNYLIQKLLERVTDD 450
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + + S Q FV ++D G+ +++KL++ ++ +V+ +L+ L
Sbjct: 451 QRLEL---VRSSAQSFVYIALDPHGTRALQKLVECISTEE-EAGIVVDSLRGSIVELSRD 506
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL+++ + + FI+ AA+E C+ +A H GC + +D + +Q+
Sbjct: 507 LNGNHVVQKCLQKLKPEDFQ--FIFDAAIESCVKIATHRHGCCVLQRCLDHGSKEQFQQL 564
Query: 280 LYLISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
I + L+ + GNYVVQ++L E I L+ I+LSL K GS V
Sbjct: 565 CEEIIAHVDELATDPFGNYVVQYILTKQTERSASEYTNRIVNILKPKIIELSLHKFGSNV 624
Query: 336 VQNCLKYRITVNYIVEEFLLNS--DQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
V+ L+ + ++ E L S +I ++ D YGNYV+QTAL + R N+ +L+QRL
Sbjct: 625 VEKVLRTPVVSELMITELLNRSGDSKIDQLLHDGYGNYVLQTAL-DIARENNKYLYQRLS 683
Query: 394 TKLQ 397
L+
Sbjct: 684 DTLK 687
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 290 LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNY- 348
LSR+ +GN+VVQ L+ P + I + + ++ + G V+Q CL + +
Sbjct: 503 LSRDLNGNHVVQKCLQKLKPEDFQFIFDAAIESCVKIATHRHGCCVLQRCLDHGSKEQFQ 562
Query: 349 -IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL---R 404
+ EE + + D++ A D +GNYV+Q L + ++ R+V L+ + L +
Sbjct: 563 QLCEEIIAHVDEL---ATDPFGNYVVQYILTKQTERSASEYTNRIVNILKPKIIELSLHK 619
Query: 405 FG 406
FG
Sbjct: 620 FG 621
>gi|453088007|gb|EMF16048.1| ARM repeat-containing protein [Mycosphaerella populorum SO2202]
Length = 1055
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 149/281 (53%), Gaps = 11/281 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ KL + + + +F+ V E +++ + + ++ K +E+ N++
Sbjct: 632 IYNLCKDQHGCRFLQRKLEERNEKTVQVIFDEVKEHMIELMVDPFGNYLCQKLLESANDN 691
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q T+ I + + ++++ G+ +++K+++ ++ P + L++KAL +L+
Sbjct: 692 QR---TILIENASPSMTKIALNQHGTRALQKMIEYIST-PEQIQLIVKALGNDVVVLIQD 747
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + + FI++A HC+ + H GC + ID G ++ Q+
Sbjct: 748 LNGNHVIQKCLNHLSSIDAS--FIFEAVGAHCITVGTHRHGCCVLQRCIDHADGLQKGQM 805
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ + NA +L ++ GNYVVQ++L+L +P E +C + G LS K S V++ C
Sbjct: 806 VDHVIRNAYALVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEVPALSRQKFSSNVIEKC 865
Query: 340 LKYRITVNYIVEEF---LLNSDQIFRVACDKYGNYVIQTAL 377
+ R + N E L+ + ++ D + NYV+QTA+
Sbjct: 866 I--RCSSNETRRELIRELMVPQVLEKLLRDGFANYVVQTAM 904
>gi|347835278|emb|CCD49850.1| similar to RNA-binding protein [Botryotinia fuckeliana]
Length = 794
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 168/320 (52%), Gaps = 14/320 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN++
Sbjct: 377 IYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDE 436
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ T+ I + V+ ++++ G+ +++K+++ ++ + ++ AL+ L+
Sbjct: 437 ER---TVLIENASHDLVRIALNQHGTRALQKMIEFISTAG-QVQTIIGALRYRVVELIQD 492
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FI+ A +HC+ + H GC + ID G ++ +
Sbjct: 493 LNGNHVIQKCLNKLSPTDAQ--FIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGDQKAWL 550
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS NA L ++ GNYVVQ++L+L +P E + G LS K S V++ C
Sbjct: 551 IRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVAQLSKQKFSSNVIEKC 610
Query: 340 LK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L+ + + ++EE +L Q+ + D + NYVIQTAL +L++ RL+ ++
Sbjct: 611 LRCAQEPSKDMLIEE-MLQPTQLDGLLRDSFANYVIQTALDYA----NLNMKTRLIEAIR 665
Query: 398 QNLDSLRFG-YGKHVYNFIK 416
+L ++R YG+ + I+
Sbjct: 666 PHLPAIRTTPYGRRIQAKIQ 685
>gi|345568412|gb|EGX51306.1| hypothetical protein AOL_s00054g376 [Arthrobotrys oligospora ATCC
24927]
Length = 965
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 173/338 (51%), Gaps = 32/338 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I LL +D+ G ++LQ KL + + ++ +F F +++ + + ++ K +E N +
Sbjct: 568 IYLLCKDQHGCRFLQRKLEEQNPKDIEIIFRETQAFIVELMTDPFGNYLCQKLLEHTNNE 627
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++ + + V+ ++++ G+ +++K+++ ++ P + V+ AL+ L+
Sbjct: 628 QRSKL---VNNAAPHLVEIALNQHGTRALQKMIEFLST-PDQIQTVINALRGKVVELIQD 683
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FI+ A ++ + + H GC + ID P+R Q+
Sbjct: 684 LNGNHVIQKCLNRLKPEDAQ--FIFDAVGKNSVTVGTHRHGCCVLQRCIDHASTPQRAQL 741
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA +L R+ GNYVVQ++L+L +P L E + G I+LS+ K S V++
Sbjct: 742 IAHITENAFALVRDPFGNYVVQYILDLGEPELAEPMIHKFLGRIIELSMQKFSSNVIEKV 801
Query: 340 LKYRI--------------------TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIE 379
++I T +V+E ++N ++ ++ D Y NYVIQTAL +
Sbjct: 802 CPFQIQRPIPSGLTLAQCIRVSSKETRALMVKE-IVNPPELEKLIRDSYANYVIQTAL-D 859
Query: 380 TMRPNSLHLHQRLVTKLQQNLDSLRF-GYGKHVYNFIK 416
+S + LV L+ + S+R YG+ + + I+
Sbjct: 860 YAEADSRTM---LVDNLRPIMPSIRMTPYGRRIQSKIQ 894
>gi|330925771|ref|XP_003301186.1| hypothetical protein PTT_12629 [Pyrenophora teres f. teres 0-1]
gi|311324291|gb|EFQ90713.1| hypothetical protein PTT_12629 [Pyrenophora teres f. teres 0-1]
Length = 1012
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 154/296 (52%), Gaps = 18/296 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL + + +F+ + +++ + + ++ K +E CN++
Sbjct: 598 IYGLCKDQHGCRFLQKKLEERNHEHIQIIFDETAPHVVELMTDPFGNYLCQKLLEFCNDE 657
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R TL + + VQ + ++ G+ +++K+++ ++ ++++AL L+
Sbjct: 658 Q--RNTL-VRNATPAMVQIAFNQHGTRALQKMIEFISTDE-QTQMIIQALSGEVVDLIQD 713
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + + + FI+ A EHC+ + H GC + ID G ++ +
Sbjct: 714 LNGNHVIQKCLNHL--KSPEAQFIFDAVGEHCVVVGTHRHGCCVLQRCIDHASGFQKVDL 771
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ ++ L ++ GNYV+Q++L+L D +C + +LS+ K S V++ C
Sbjct: 772 IRKITAHSFQLVQDPFGNYVIQYILDLNDASFTTPMCQGFQTKICELSMQKFSSNVIEKC 831
Query: 340 LK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++ V ++ E LL+ +Q+ + D +GNYVIQTA LIE MRP
Sbjct: 832 IRCAEPQVKAMMIEELLDVEQLNSLMRDSFGNYVIQTALEFAPAELCMHLIEMMRP 887
>gi|71018695|ref|XP_759578.1| hypothetical protein UM03431.1 [Ustilago maydis 521]
gi|46099336|gb|EAK84569.1| hypothetical protein UM03431.1 [Ustilago maydis 521]
Length = 1058
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 162/320 (50%), Gaps = 24/320 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL G+ D +F+ +++ + + ++ K +E C ++
Sbjct: 545 IFALCKDQHGCRFLQKKLEEGNPAHRDMIFSETFTHFAELMTDPFGNYLCQKMLEYCTDE 604
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q I + + V S++ G+ +++K++ ++ P + ++ AL L+
Sbjct: 605 QRNLIVELVAPE---LVTISLNMHGTRAVQKMIDFLST-PRQIHSIIVALSMNVVTLIKD 660
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL ++ +N+ FIY A HC+ +A H GC + ID +R Q+
Sbjct: 661 LNGNHVVQKCLNRLGAEDNQ--FIYNAVAAHCVEVATHRHGCCVLQRCIDHASEAQRVQL 718
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA +L ++ GNYVVQ+VL+L P + + G+ LS+ K S V++ C
Sbjct: 719 VAEITYNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSSNVIEKC 778
Query: 340 LKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP---- 383
++ V + E LLN ++ ++ D + NYV+QT+ L+E +RP
Sbjct: 779 IRVSEPGVRKQLIEELLNRTRLEKLLRDSFANYVVQTSLDYADPVQRMRLVECIRPILPV 838
Query: 384 -NSLHLHQRLVTKLQQ-NLD 401
+ +R+ +KLQ+ NLD
Sbjct: 839 IRNTPYGKRIQSKLQRDNLD 858
>gi|390603815|gb|EIN13206.1| ARM repeat-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1019
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 167/331 (50%), Gaps = 26/331 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL G D +F ++ + + ++ K +E ++
Sbjct: 571 IPGLCKDQHGCRYLQKKLEEGIPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYATDE 630
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + + +QD V S++ G+ +++K++ ++ R + +++ AL +L+
Sbjct: 631 QR-NLICESVAQD--LVNISLNMHGTRAVQKMIDFLSTRRQIHSIIV-ALSLHVVVLIKD 686
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + ID +R Q+
Sbjct: 687 LNGNHVIQKCLNKLAPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCIDHASDQQRVQL 744
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA +L ++ GNYVVQ++L+L D + + G+ LS+ K S V++ C
Sbjct: 745 VNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFTGNVCALSVQKFSSNVIEKC 804
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP--- 383
++ T ++EE LLN ++ ++ D YGNY +QTA L+E +RP
Sbjct: 805 IRVAEHSTRKLLIEE-LLNRTRLEKLLRDSYGNYCVQTALDYAEPGQRALLVEGIRPVLP 863
Query: 384 --NSLHLHQRLVTKLQ-QNLDSLRFGYGKHV 411
+ +R+ KLQ + LD GY +H+
Sbjct: 864 LIRNTPYGKRIQNKLQREQLDHYGGGYNQHM 894
>gi|154316386|ref|XP_001557514.1| hypothetical protein BC1G_04124 [Botryotinia fuckeliana B05.10]
Length = 1088
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 168/320 (52%), Gaps = 14/320 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN++
Sbjct: 671 IYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDE 730
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ T+ I + V+ ++++ G+ +++K+++ ++ + ++ AL+ L+
Sbjct: 731 ER---TVLIENASHDLVRIALNQHGTRALQKMIEFISTAG-QVQTIIGALRYRVVELIQD 786
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FI+ A +HC+ + H GC + ID G ++ +
Sbjct: 787 LNGNHVIQKCLNKLSPTDAQ--FIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGDQKAWL 844
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS NA L ++ GNYVVQ++L+L +P E + G LS K S V++ C
Sbjct: 845 IRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVAQLSKQKFSSNVIEKC 904
Query: 340 LK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L+ + + ++EE +L Q+ + D + NYVIQTAL +L++ RL+ ++
Sbjct: 905 LRCAQEPSKDMLIEE-MLQPTQLDGLLRDSFANYVIQTALDYA----NLNMKTRLIEAIR 959
Query: 398 QNLDSLRFG-YGKHVYNFIK 416
+L ++R YG+ + I+
Sbjct: 960 PHLPAIRTTPYGRRIQAKIQ 979
>gi|302141949|emb|CBI19152.3| unnamed protein product [Vitis vinifera]
Length = 273
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 144/273 (52%), Gaps = 9/273 (3%)
Query: 142 NQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL 201
N + ++ K + CNEDQ ++I L +T + V+ S++ G+ ++KL+ + R +
Sbjct: 3 NPFGNYLMQKLFDVCNEDQRMQIVLALTEEPGELVRISLNAHGTRVVQKLVMTLKTRQQI 62
Query: 202 LDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGC 261
LV+ AL+ F L G+ VV +CLE + + K F + A ++C+ +A H GC
Sbjct: 63 -SLVVLALEPYFLDLTKDHHGNHVVQRCLEYLSCEDIK--FFFYDAAKYCVDIATHRHGC 119
Query: 262 INMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRG 321
+ I G ++++ IS N L+++ GNYV+Q+++EL+ P I ++ G
Sbjct: 120 CVLQRCITRSTGKHGEKLVAEISANGLLLAQDDFGNYVIQYIIELKIPSAIASLMSQFEG 179
Query: 322 HYIDLSLTKCGSFVVQNCLKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIET 380
+Y+ LS+ K S VV+ CLK+ + IV EF L+ ++ D + NYVIQ+AL T
Sbjct: 180 NYVHLSMQKFSSHVVEKCLKHLEESRPRIVHEF-LSVPHFEQLMQDPFANYVIQSALEVT 238
Query: 381 MRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYN 413
P LH L+ ++ ++ Y K +++
Sbjct: 239 KGP----LHASLIEAVRPHIILRTSPYCKKIFS 267
>gi|429851913|gb|ELA27072.1| pumilio domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 997
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 168/320 (52%), Gaps = 14/320 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL + + ++ ++ +++ + + ++ K +E CN+D
Sbjct: 574 IYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDD 633
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + +Q + D V+ ++++ G+ +++K+++ V +++++ AL+ L+
Sbjct: 634 ERT-VLIQNAAAD--MVRIALNQHGTRALQKMIEFVTTST-QIEMIINALRYQVVELIQD 689
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FI+ A +C+ + H GC + ID G ++ +
Sbjct: 690 LNGNHVIQKCLNKLSAKDAQ--FIFDAVGTNCVDVGTHRHGCCVLQRCIDHASGDQKVWL 747
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ +A L ++ GNYVVQ++++L +P E I + LS K S V++ C
Sbjct: 748 ISKITEHAPILVQDPFGNYVVQYIIDLNEPSFTEPIVRMFKNRIGQLSRHKFSSNVIEKC 807
Query: 340 LK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L+ + + IVEE LL +I R+ D Y NYVIQTAL E P H RLV ++
Sbjct: 808 LRCSQEPSRDMIVEE-LLTPGEIERLLRDSYANYVIQTAL-EYATP---HSKFRLVDAIR 862
Query: 398 QNLDSLR-FGYGKHVYNFIK 416
L S+R YG+ + I+
Sbjct: 863 PILPSIRSTPYGRRIQAKIQ 882
>gi|297790088|ref|XP_002862953.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
gi|297308739|gb|EFH39212.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 136/269 (50%), Gaps = 7/269 (2%)
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
F I ++ L R+ +TS F+ +K+GS ++KL+ + L A
Sbjct: 58 FKGMISKSDKTVLQRMASLLTSDSDYFMAIVTNKYGSRRVQKLLGKSDDADALF---CAA 114
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ R F + K + V ++ + + +Y+ L H L LAC + GCI +N+ I
Sbjct: 115 ILRRFLHITTDKYATYVTIRAM--VVFDKEMKKAMYEHILYHALDLACDQHGCIALNDII 172
Query: 269 DEMKGPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
+ P R Q+L L++ NA LS + SGN+VVQHVL L D I +L GH IDLS
Sbjct: 173 TDSDDPYYRDQLLDLVASNALCLSNDASGNFVVQHVLTLYDLRCTHNIAVNLYGHCIDLS 232
Query: 328 LTKCGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
K GS++V+ L+ ++ +V E L + D + R+A +++GN+V+ AL T + +
Sbjct: 233 FKKYGSYIVEKLLEAEESMVVVVVELLDCDGDTLMRLARNEFGNFVVVKALRFTKAMSKI 292
Query: 387 HLHQRLVTKLQQNLDSLRFGYGKHVYNFI 415
L LV KL L LR +G ++ + +
Sbjct: 293 DLFWGLVQKLMPFLHLLRRSHGSNIASIL 321
>gi|297793565|ref|XP_002864667.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
gi|297310502|gb|EFH40926.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 136/269 (50%), Gaps = 7/269 (2%)
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
F I ++ L R+ +TS F+ +K+GS ++KL+ + L A
Sbjct: 58 FKGMISKSDKTVLQRMASLLTSDSDYFMAIVTNKYGSRRVQKLLGKSDDADALF---CAA 114
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ R F + K + V ++ + + +Y+ L H L LAC + GCI +N+ I
Sbjct: 115 ILRRFLHITTDKYATYVTIRAM--VVFDKEMKKAMYEHILYHALDLACDQHGCIALNDII 172
Query: 269 DEMKGPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
+ P R Q+L L++ NA LS + SGN+VVQHVL L D I +L GH IDLS
Sbjct: 173 TDSDDPYYRDQLLDLVASNALCLSNDASGNFVVQHVLTLYDLRCTHNIAVNLYGHCIDLS 232
Query: 328 LTKCGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
K GS++V+ L+ ++ +V E L + D + R+A +++GN+V+ AL T + +
Sbjct: 233 FKKYGSYIVEKLLEAEESMVVVVVELLDCDGDTLMRLARNEFGNFVVVKALRFTKAMSKI 292
Query: 387 HLHQRLVTKLQQNLDSLRFGYGKHVYNFI 415
L LV KL L LR +G ++ + +
Sbjct: 293 DLFWGLVQKLMPFLHLLRRSHGSNIASIL 321
>gi|358366888|dbj|GAA83508.1| RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 1002
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 168/334 (50%), Gaps = 22/334 (6%)
Query: 47 PQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQD 106
P T+ +P S +S SG N + +NF P +H + L +D
Sbjct: 554 PYGTYRMPEGSAKSVTSRRSG-DNDSAQLSRFTNF---------PLEHYKGE-LYGLCKD 602
Query: 107 EQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITL 166
+ G +YLQ KL + + +F +++ + + ++ K +E N++Q R L
Sbjct: 603 QHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQ--RTDL 660
Query: 167 QITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVV 226
+ QL V+ ++++ G+ +++K+++ ++ V+ +L+ L+ G+ V+
Sbjct: 661 INNAAHQL-VKIALNQHGTRALQKMIEFISTAE-QTQTVIHSLEDHVVELVQDLNGNHVI 718
Query: 227 LQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVN 286
+CL ++ + + FIY A +C+ + H GC + ID G ++ +++ I+ N
Sbjct: 719 QKCLNRLSAEDAQ--FIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLIAQITAN 776
Query: 287 AASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK---YR 343
A +L ++ GNYVVQ++L+L +P+ E +C + RG+ LS K S V++ CL+ ++
Sbjct: 777 AFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCLRTADFQ 836
Query: 344 ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I I E +L ++ ++ D + NYV+QTA+
Sbjct: 837 IRRQMIDE--MLAGAELEKMLRDSFANYVVQTAM 868
>gi|317025399|ref|XP_001388993.2| RNA-binding protein [Aspergillus niger CBS 513.88]
Length = 1000
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 168/334 (50%), Gaps = 22/334 (6%)
Query: 47 PQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQD 106
P T+ +P S +S SG N + +NF P +H + L +D
Sbjct: 552 PYGTYRMPEGSAKSVTSRRSG-DNDSAQLSRFTNF---------PLEHYKGE-LYGLCKD 600
Query: 107 EQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITL 166
+ G +YLQ KL + + +F +++ + + ++ K +E N++Q R L
Sbjct: 601 QHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQ--RTDL 658
Query: 167 QITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVV 226
+ QL V+ ++++ G+ +++K+++ ++ V+ +L+ L+ G+ V+
Sbjct: 659 INNAAHQL-VKIALNQHGTRALQKMIEFISTAE-QTQTVIHSLEDHVVELVQDLNGNHVI 716
Query: 227 LQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVN 286
+CL ++ + + FIY A +C+ + H GC + ID G ++ +++ I+ N
Sbjct: 717 QKCLNRLSAEDAQ--FIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLIAQITAN 774
Query: 287 AASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK---YR 343
A +L ++ GNYVVQ++L+L +P+ E +C + RG+ LS K S V++ CL+ ++
Sbjct: 775 AFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCLRTADFQ 834
Query: 344 ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I I E +L ++ ++ D + NYV+QTA+
Sbjct: 835 IRRQMIDE--MLAGAELEKMLRDSFANYVVQTAM 866
>gi|134055097|emb|CAK43737.1| unnamed protein product [Aspergillus niger]
Length = 765
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 168/334 (50%), Gaps = 22/334 (6%)
Query: 47 PQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQD 106
P T+ +P S +S SG N + +NF P +H + L +D
Sbjct: 317 PYGTYRMPEGSAKSVTSRRSG-DNDSAQLSRFTNF---------PLEHYKGE-LYGLCKD 365
Query: 107 EQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITL 166
+ G +YLQ KL + + +F +++ + + ++ K +E N++Q R L
Sbjct: 366 QHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQ--RTDL 423
Query: 167 QITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVV 226
+ QL V+ ++++ G+ +++K+++ ++ V+ +L+ L+ G+ V+
Sbjct: 424 INNAAHQL-VKIALNQHGTRALQKMIEFISTAE-QTQTVIHSLEDHVVELVQDLNGNHVI 481
Query: 227 LQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVN 286
+CL ++ + + FIY A +C+ + H GC + ID G ++ +++ I+ N
Sbjct: 482 QKCLNRLSAEDAQ--FIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLIAQITAN 539
Query: 287 AASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK---YR 343
A +L ++ GNYVVQ++L+L +P+ E +C + RG+ LS K S V++ CL+ ++
Sbjct: 540 AFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCLRTADFQ 599
Query: 344 ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I I E +L ++ ++ D + NYV+QTA+
Sbjct: 600 IRRQMIDE--MLAGAELEKMLRDSFANYVVQTAM 631
>gi|367035312|ref|XP_003666938.1| hypothetical protein MYCTH_2312108 [Myceliophthora thermophila ATCC
42464]
gi|347014211|gb|AEO61693.1| hypothetical protein MYCTH_2312108 [Myceliophthora thermophila ATCC
42464]
Length = 827
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 170/323 (52%), Gaps = 14/323 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ++L + + ++ ++ +++ + + ++ K +E C++D
Sbjct: 378 IYSLCKDQHGCRYLQKQLENRIPEQIHMIWLETNQHVVELMTDPFGNYLCQKLLEYCSDD 437
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ T+ I + V ++++ G+ +++K+++ V + ++L+++AL+ L+
Sbjct: 438 ER---TVLIQNAAPSMVSIALNQHGTRALQKMIEHVTTQV-QINLIVEALRNQVVELIQD 493
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + FI+ A +HC+ + H GC + ID G ++ +
Sbjct: 494 LNGNHVIQKCLNKLSAADAS--FIFDAVGKHCVEVGTHRHGCCVLQRCIDHADGNQKVWL 551
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ +A +L ++ GNYVVQ++++L + E + G LS K S VV+ C
Sbjct: 552 VECITEHAVTLVQDPFGNYVVQYIIDLNEATFTEPLVKQFEGRIAQLSKHKFSSNVVEKC 611
Query: 340 LK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L+ + + IV E LL +I R+ D +GNYVIQTAL + P S H RL+ ++
Sbjct: 612 LRCASDESRDMIVSE-LLAPGEIERLLRDSFGNYVIQTAL-DYSTPISKH---RLIEAIR 666
Query: 398 QNLDSLRF-GYGKHVYNFIKDCD 419
L S+R YG+ + I+ D
Sbjct: 667 PLLPSVRATPYGRRIQAKIQAYD 689
>gi|378727687|gb|EHY54146.1| hypothetical protein HMPREF1120_02321 [Exophiala dermatitidis
NIH/UT8656]
Length = 1006
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 158/314 (50%), Gaps = 20/314 (6%)
Query: 76 ITSSNFQTPLGFQAN----------PFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFL 125
IT+ + P+G + N P ++ S + L +D+ G +YLQ KL G+ +
Sbjct: 560 ITAPGTRAPIGGRRNHGDEARFANMPLENYRGS-LYELCKDQHGCRYLQRKLEDGNEEHI 618
Query: 126 DKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGS 185
+F +++ + + ++ K E C E+Q T I + ++++ G+
Sbjct: 619 QAIFAETCPHIIELMTDPFGNYLCQKLFEFCTEEQR---TALINTAAPALTTIALNQHGT 675
Query: 186 SSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQ 245
+++K+++ V ++ +++AL L+ G+ VV +CL ++ ++ FIY
Sbjct: 676 RALQKMIEFVRTEE-QVETIIRALSDRVVDLVQDLNGNHVVQKCLTRLGAE--RSQFIYD 732
Query: 246 AALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLE 305
A ++C+ + H GC + ID +G +R Q++ I+ A L ++ GNYVVQ++L+
Sbjct: 733 AVGKYCVVVGTHRHGCCVLQRCIDHAQGFQRAQLIARITHCAFDLVQDPFGNYVVQYILD 792
Query: 306 LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRV 363
L++ + +C S G LS K S V++ CL+ T ++EE L+ +++ ++
Sbjct: 793 LDEISFTKPLCESFLGRIPQLSKQKFSSNVIEKCLRTADSDTKRRMIEEMLI-GNELEKM 851
Query: 364 ACDKYGNYVIQTAL 377
D + NYV+QTAL
Sbjct: 852 LRDAFANYVVQTAL 865
>gi|297796981|ref|XP_002866375.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
gi|297312210|gb|EFH42634.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 7/281 (2%)
Query: 137 FQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA 196
F ++ + A F + I ++ L R+ +TS F+ +K+GS ++KL+
Sbjct: 46 FNLMTDGEAVSYFREMISKSDKTVLQRMASLLTSDSDYFMAIVTNKYGSRRVQKLL---G 102
Query: 197 NRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLAC 256
+ A+ R F + K S V ++ + K +Y+ L H L +AC
Sbjct: 103 KSDEVDAFFCAAILRRFLHITTDKYASYVTIRGMVVFDKEMKKP--MYEHILYHALDIAC 160
Query: 257 HEQGCINMNNFIDEMKGPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETI 315
+ GCI +N+ I + P R Q+L L++ NA LS + SGN+VVQHVL L + I I
Sbjct: 161 DQHGCIALNDIITDADDPYYRDQLLDLVASNALCLSNDASGNFVVQHVLTLYELRCIHNI 220
Query: 316 CFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQ 374
+L GH IDLS K GS++V+ L+ ++ +V E L + D + R+A +++GN+V+
Sbjct: 221 AVNLFGHCIDLSFKKYGSYIVEKLLEAEESMLVVVVELLDCDGDTLMRLARNEFGNFVVV 280
Query: 375 TALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFI 415
AL T + + L LV KL + LR +G ++ + +
Sbjct: 281 KALRFTKAMSKIDLFWGLVQKLMPFIHLLRRSHGSNIASIL 321
>gi|299755883|ref|XP_001828946.2| pumilio-family RNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|298411424|gb|EAU92953.2| pumilio-family RNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 982
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 165/320 (51%), Gaps = 14/320 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL G D +F + +++ + + ++ K +E +D
Sbjct: 565 IATLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFKHFAELMTDPFGNYLCQKLLEFATDD 624
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + + +QD V S++ G+ +++K++ ++ R + +++ AL L+
Sbjct: 625 QR-NLICESVAQD--LVNISLNMHGTRAVQKMIDFLSTRRQIHSIIL-ALSLHVVSLIKD 680
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + ID +R Q+
Sbjct: 681 LNGNHVIQKCLNKLAPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCIDHASEAQRIQL 738
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA +L ++ GNYVVQ++L+L D + + G+ LS+ K S V++ C
Sbjct: 739 VNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFLGNICALSVQKFSSNVMEKC 798
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
++ T ++EE LLN ++ ++ D YGNY +QTAL + P L LV ++
Sbjct: 799 IRVAEHNTRKLVIEE-LLNRTRLEKLLRDSYGNYCVQTAL-DYAEPGQRAL---LVEGIR 853
Query: 398 QNLDSLR-FGYGKHVYNFIK 416
L +R YGK + N ++
Sbjct: 854 PVLPLIRNTPYGKRIQNKLQ 873
>gi|125536693|gb|EAY83181.1| hypothetical protein OsI_38391 [Oryza sativa Indica Group]
Length = 503
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 159/300 (53%), Gaps = 10/300 (3%)
Query: 116 KLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLF 175
+L G R +D +F V+ +++ N + ++ K + C+++Q + I L +T +
Sbjct: 206 RLDDG-KREVDFIFAGVARHAVELMVNPFGNYLMQKLLAVCDDEQRMAIVLTLTKDPFVL 264
Query: 176 VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYH 235
V+ S++ G+ +++KL++++ R + LV++AL+ F L+ G+ VV +CL+
Sbjct: 265 VRISLNVHGTRAVQKLIESLRTREEI-QLVVEALRPGFLELIKDPNGNHVVQRCLQSFDA 323
Query: 236 HNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFS 295
++NK I++AA HCL + GC + I G +R++++ I+ N L+++
Sbjct: 324 NDNKP--IFEAAAVHCLDIGMQCHGCCVLQRCIARSGGEQREKLVAAIASNGFELAQDAY 381
Query: 296 GNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK-YRITVNYIVEEFL 354
GNYVVQ+V++L+ P ++ +G YI LS+ K S VV+ CLK ++ + L
Sbjct: 382 GNYVVQYVIDLKVPTANASLTKQFQGRYIHLSMQKFSSNVVEKCLKVFKEADKATIILEL 441
Query: 355 LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFG-YGKHVYN 413
L ++ + NYVI +A+ + + LH L ++ +++ LR Y K +Y+
Sbjct: 442 LAVPHFEQLLQHPFANYVIYSAI----QNSKGSLHSALTNAIRPHVELLRTSPYCKRIYS 497
>gi|358055198|dbj|GAA98967.1| hypothetical protein E5Q_05655 [Mixia osmundae IAM 14324]
Length = 852
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 159/321 (49%), Gaps = 13/321 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ KL G+ + D +F+ + +++ + + ++ K E ++Q
Sbjct: 453 LCKDQHGCRFLQRKLEEGNPEYRDMIFSEIFPHFAELMTDAFGNYLSQKLFEFATDEQRD 512
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+ I+ + V S++ G+ +++KL+ + R + L+M AL L+
Sbjct: 513 ALIDSISGE---LVSISLNMHGTRAVQKLLDFLTTRRQVQSLIM-ALNLNVVTLIKDLNS 568
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL + +N+ FIY A +C+ +A H GC + ID +R Q++
Sbjct: 569 NHVIQKCLNHLPPEDNQ--FIYNAVATNCIEVATHRHGCCVLQRCIDHASESQRIQLVTE 626
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ N+ L + GNYVVQ+VL+L D IE I G+ LS K S VV+ C++
Sbjct: 627 ITYNSLILVGDPFGNYVVQYVLDLNDNRFIEAIVRQFVGNVCTLSAQKFSSNVVEKCIRV 686
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNL 400
+V EF LN + + R+ D + NYV+QTAL + P R++T L ++
Sbjct: 687 ADAAGRKVLVNEF-LNRNNLERMLRDSFANYVVQTAL-DWAEPAQKQELVRMITPLMPSI 744
Query: 401 DSLRFGYGKHVYNFI-KDCDL 420
+ YGK + I +D D+
Sbjct: 745 RNTP--YGKRISAKISRDNDM 763
>gi|363755368|ref|XP_003647899.1| hypothetical protein Ecym_7236 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891935|gb|AET41082.1| hypothetical protein Ecym_7236 [Eremothecium cymbalariae
DBVPG#7215]
Length = 731
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 157/308 (50%), Gaps = 14/308 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ +L G S +F +++ +++ + + ++ K +E E+
Sbjct: 411 IYSLCKDQHGCRFLQRQLDIGGSEAATSIFEETNQYVVELMTDSFGNYLIQKLVERVTEE 470
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q RITL + S FV ++D G+ +++KL++ + ++ +L+ L
Sbjct: 471 Q--RITL-VKSSAPRFVSIALDPHGTRALQKLVECIDTEV-ESQTIISSLRDSVVELSRD 526
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL+++ + ++ FI+ AA + C+ +A H GC + +D +RKQ+
Sbjct: 527 LNGNHVVQKCLQRLS--SAESQFIFDAACKECVKIATHRHGCCVLQRCLDHGNKEQRKQL 584
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELE-----DPYLIETICFSLRGHYIDLSLTKCGSF 334
I N L+ + GNYVVQ++L E + I L+ I+LSL K GS
Sbjct: 585 CDNILDNVNLLTLDPFGNYVVQYILTKESELGSNHRHTHEIVNILKPRIIELSLHKFGSN 644
Query: 335 VVQNCLKYRITVNYIVEEFLLN--SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
VV+ L+ I ++ E L S I ++ D +GNYV+QTAL + +P + +L+ RL
Sbjct: 645 VVEKILRTPIVAEIMIAELLNTGASHGIEQLLHDGFGNYVLQTAL-DVAKPANSYLYNRL 703
Query: 393 VTKLQQNL 400
L+ L
Sbjct: 704 TEILKPML 711
>gi|413956754|gb|AFW89403.1| hypothetical protein ZEAMMB73_540172 [Zea mays]
Length = 676
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 151/285 (52%), Gaps = 9/285 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +A+D+ +YLQ+KL G +D +F + ++ + + ++ + +E C+E
Sbjct: 361 IYHMAKDQNWCRYLQDKLLEG-KHHVDVIFEGIINHIADLMISSFGNYLAQEIVEVCDEG 419
Query: 160 QLLRITLQITSQD-QLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
Q+LRI L +T + + S++ G+ ++KL++ V++R ++ L++ AL+ F LL+
Sbjct: 420 QMLRIILVLTQYPLKQLIAVSLNTHGTRVVQKLIEKVSSREQIM-LIISALQPSFMLLVN 478
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
G V+ +CL +NK FI++ A +CL +A H GC + + I + +G
Sbjct: 479 DHNGHHVIQRCLVNFGVEDNK--FIFEGAAANCLNMAVHCHGCFVLQSCI-KARGRYLAN 535
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
++ I ++ L+++ GNYVVQ VLE E P + G Y+ LS + S VV+
Sbjct: 536 LIMEICLHGFELAQDPFGNYVVQCVLEQEIPSANAHLASLFEGKYVYLSKQQGSSNVVEK 595
Query: 339 CLKY--RITVNYIVEEFLLNSDQIF-RVACDKYGNYVIQTALIET 380
CL + I++E L+ S F ++ D++ NYV +TAL T
Sbjct: 596 CLMFFPDDAKAVIIQELLMLSGSDFEQLLQDRFANYVFRTALDHT 640
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 17/122 (13%)
Query: 276 RKQILYLISVNAAS---LSRNFSGNYVVQHVL---ELED-PYLIETICFSLRGHYIDLSL 328
R+QI+ +IS S L + +G++V+Q L +ED ++ E + +++++
Sbjct: 459 REQIMLIISALQPSFMLLVNDHNGHHVIQRCLVNFGVEDNKFIFEGAAANC----LNMAV 514
Query: 329 TKCGSFVVQNCLKYR--ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
G FV+Q+C+K R N I+E L F +A D +GNYV+Q L + + +
Sbjct: 515 HCHGCFVLQSCIKARGRYLANLIMEICLHG----FELAQDPFGNYVVQCVLEQEIPSANA 570
Query: 387 HL 388
HL
Sbjct: 571 HL 572
>gi|259489449|tpe|CBF89730.1| TPA: RNA-binding protein, putative (AFU_orthologue; AFUA_1G02510)
[Aspergillus nidulans FGSC A4]
Length = 650
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 161/320 (50%), Gaps = 14/320 (4%)
Query: 87 FQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYAR 146
F +P ++ N I L +D+ G +YLQ KL + L +F +++ + +
Sbjct: 229 FNNHPIEYYRNE-IYGLCKDQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGN 287
Query: 147 FVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVM 206
++ K +E N++Q R L + QL V+ ++++ G+ +++K+++ ++ V+
Sbjct: 288 YLCQKLLEYSNDEQ--RTVLVNKAAPQL-VKIALNQHGTRALQKMIEFISTEE-QTQTVI 343
Query: 207 KALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNN 266
ALK L+ G+ V+ +CL ++ K+ FIY A C+ + H GC +
Sbjct: 344 DALKDHVVELVQDLNGNHVIQKCLNRLT--AEKSQFIYDAVGAQCVTVGTHRHGCCVLQR 401
Query: 267 FIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
ID G +R +++ I+ NA +L ++ GNYVVQ++L+L + E +C L
Sbjct: 402 CIDHASGAQRARLIEQITENAFALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKL 461
Query: 327 SLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPN 384
S K S V++ CL+ ++EE +L D++ ++ D Y NYV+QTA+ + P
Sbjct: 462 SKHKFSSNVIEKCLRTADEEMRRQMIEE-MLAGDELEKMLRDSYANYVVQTAM-DYADPA 519
Query: 385 SLHLHQRLVTKLQQNLDSLR 404
+ R+V ++ L SLR
Sbjct: 520 T---RARIVKYIEPILPSLR 536
>gi|346972361|gb|EGY15813.1| pumilio domain-containing protein [Verticillium dahliae VdLs.17]
Length = 905
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 172/336 (51%), Gaps = 15/336 (4%)
Query: 87 FQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYAR 146
+Q P +H I L +D+ G +YLQ+KL + + ++ ++ +++ + +
Sbjct: 436 YQNLPLEHVGGQ-IYELCKDQHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFGN 494
Query: 147 FVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVM 206
++ K +E CN+D+ + +Q +QD V+ ++++ G+ +++K+++ V + +++
Sbjct: 495 YLCQKLLEYCNDDERT-VLIQNAAQD--MVRIALNQHGTRALQKMIEFVTTSI-QVQMII 550
Query: 207 KALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNN 266
AL+ L+ G+ V+ +CL ++ + + FI+ A HC+ + H GC +
Sbjct: 551 DALRYRVVELIQDLNGNHVIQKCLNKLSAPDAQ--FIFDAVGNHCVDVGTHRHGCCVLQR 608
Query: 267 FIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
ID G ++ ++ I+ +A L ++ GNYVVQ++++L +P E + R L
Sbjct: 609 CIDHADGAQKVWLIGKITEHAPVLVQDPFGNYVVQYIIDLNEPAFTEPVVGMFRNRICQL 668
Query: 327 SLTKCGSFVVQNCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPN 384
S K S V++ L+ + IV+E LL ++ R+ D Y NYVIQTAL E P
Sbjct: 669 SRHKFSSNVIEKLLRCSQAQGRDMIVDE-LLQPGEMDRLLRDSYANYVIQTAL-EYATPE 726
Query: 385 SLHLHQRLVTKLQQNLDSLR-FGYGKHVYNFIKDCD 419
H R+V ++ L ++R YG+ + ++ D
Sbjct: 727 GKH---RMVEVIRPFLPAVRSTPYGRRIQAKVQAYD 759
>gi|350638129|gb|EHA26485.1| hypothetical protein ASPNIDRAFT_55402 [Aspergillus niger ATCC 1015]
Length = 1507
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 168/334 (50%), Gaps = 22/334 (6%)
Query: 47 PQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQD 106
P T+ +P S +S SG N + +NF P +H + L +D
Sbjct: 552 PYGTYRMPEGSAKSVTSRRSG-DNDSAQLSRFTNF---------PLEHYKGE-LYGLCKD 600
Query: 107 EQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITL 166
+ G +YLQ KL + + +F +++ + + ++ K +E N++Q R L
Sbjct: 601 QHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQ--RTDL 658
Query: 167 QITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVV 226
+ QL V+ ++++ G+ +++K+++ ++ V+ +L+ L+ G+ V+
Sbjct: 659 INNAAHQL-VKIALNQHGTRALQKMIEFISTAE-QTQTVIHSLEDHVVELVQDLNGNHVI 716
Query: 227 LQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVN 286
+CL ++ + + FIY A +C+ + H GC + ID G ++ +++ I+ N
Sbjct: 717 QKCLNRLSAEDAQ--FIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLIAQITAN 774
Query: 287 AASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK---YR 343
A +L ++ GNYVVQ++L+L +P+ E +C + RG+ LS K S V++ CL+ ++
Sbjct: 775 AFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCLRTADFQ 834
Query: 344 ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I I E +L ++ ++ D + NYV+QTA+
Sbjct: 835 IRRQMIDE--MLAGAELEKMLRDSFANYVVQTAM 866
>gi|67516077|ref|XP_657924.1| hypothetical protein AN0320.2 [Aspergillus nidulans FGSC A4]
gi|40746570|gb|EAA65726.1| hypothetical protein AN0320.2 [Aspergillus nidulans FGSC A4]
Length = 1515
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 161/320 (50%), Gaps = 14/320 (4%)
Query: 87 FQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYAR 146
F +P ++ N I L +D+ G +YLQ KL + L +F +++ + +
Sbjct: 581 FNNHPIEYYRNE-IYGLCKDQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGN 639
Query: 147 FVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVM 206
++ K +E N++Q R L + QL V+ ++++ G+ +++K+++ ++ V+
Sbjct: 640 YLCQKLLEYSNDEQ--RTVLVNKAAPQL-VKIALNQHGTRALQKMIEFISTEE-QTQTVI 695
Query: 207 KALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNN 266
ALK L+ G+ V+ +CL ++ K+ FIY A C+ + H GC +
Sbjct: 696 DALKDHVVELVQDLNGNHVIQKCLNRLTAE--KSQFIYDAVGAQCVTVGTHRHGCCVLQR 753
Query: 267 FIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
ID G +R +++ I+ NA +L ++ GNYVVQ++L+L + E +C L
Sbjct: 754 CIDHASGAQRARLIEQITENAFALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKL 813
Query: 327 SLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPN 384
S K S V++ CL+ ++EE +L D++ ++ D Y NYV+QTA+ + P
Sbjct: 814 SKHKFSSNVIEKCLRTADEEMRRQMIEE-MLAGDELEKMLRDSYANYVVQTAM-DYADPA 871
Query: 385 SLHLHQRLVTKLQQNLDSLR 404
+ R+V ++ L SLR
Sbjct: 872 T---RARIVKYIEPILPSLR 888
>gi|452845425|gb|EME47358.1| hypothetical protein DOTSEDRAFT_69329 [Dothistroma septosporum
NZE10]
Length = 1038
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 168/323 (52%), Gaps = 14/323 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ KL + + + +F V+ ++ + + ++ K +E+ N+D
Sbjct: 608 IYTLCKDQHGCRFLQRKLEERNEKTVQIIFEEVNTHMVDLMVDPFGNYLCQKLLESTNDD 667
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q T+ I + + ++++ G+ +++K+++ ++ P L++ AL+ LL+
Sbjct: 668 QR---TVLIQNAKPAMTKIALNQHGTRALQKMIEYIST-PEQTALIIDALRNDVVLLIQD 723
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + + FI+ A +C+ + H GC + ID G ++ ++
Sbjct: 724 LNGNHVIQKCLNHLSSIDAA--FIFHAVGNNCITVGTHRHGCCVLQRCIDHADGLQKGEM 781
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ + NA +L ++ GNYVVQ++L+L +P E +C + G LS K S V++ C
Sbjct: 782 VDHVIRNAYALVQDPFGNYVVQYILDLSEPCFTEPLCQAFFGEIPALSRQKFSSNVIEKC 841
Query: 340 LK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
++ T +V+E ++ + + ++ D + NYV+QTA+ + P+ L LV ++
Sbjct: 842 IRCSSETTKRSLVQE-IMPTQVLEKLLRDGFANYVVQTAM-DFADPD---LKPLLVENVR 896
Query: 398 QNLDSLR-FGYGKHVYNFIKDCD 419
Q L +R +G+ + + I D D
Sbjct: 897 QILPGIRNTPHGRRILSKISDYD 919
>gi|319411787|emb|CBQ73830.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1016
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 162/320 (50%), Gaps = 24/320 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL + D +F+ +++ + + ++ K +E C ++
Sbjct: 535 IFALCKDQHGCRFLQKKLEESNPAHRDMIFSETFTHFAELMTDPFGNYLCQKMLEYCTDE 594
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q I + S+ V S++ G+ +++K++ ++ P + ++ AL L+
Sbjct: 595 QRNLIVELVASE---LVTISLNMHGTRAVQKMIDFLST-PRQIHSIIVALSMNVVTLIKD 650
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL ++ +N+ FIY A HC+ +A H GC + ID +R Q+
Sbjct: 651 LNGNHVVQKCLNRLGAEDNQ--FIYNAVAAHCVEVATHRHGCCVLQRCIDHASEAQRVQL 708
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA +L ++ GNYVVQ+VL+L P + + G+ LS+ K S V++ C
Sbjct: 709 VAEITYNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSSNVMEKC 768
Query: 340 LKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP---- 383
++ V + E LLN ++ ++ D + NYV+QT+ L+E +RP
Sbjct: 769 IRVSEPGVRKQLIEELLNRTRLEKLLRDSFANYVVQTSLDYADPVQRMRLVECIRPILPV 828
Query: 384 -NSLHLHQRLVTKLQQ-NLD 401
+ +R+ +KLQ+ NLD
Sbjct: 829 IRNTPYGKRIQSKLQRDNLD 848
>gi|344300994|gb|EGW31306.1| hypothetical protein SPAPADRAFT_61876 [Spathaspora passalidarum
NRRL Y-27907]
Length = 465
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 146/278 (52%), Gaps = 7/278 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
IL L +D+ G ++LQ +L D +F + +++ + + ++ K E +
Sbjct: 156 ILNLCKDQHGCRFLQRQLEL-DEGAATIIFQEIYFKIVELMIDPFGNYLIQKLFEHITVE 214
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q RI L + + F++ S+D G+ +++KL++ ++ L+++AL+ +L
Sbjct: 215 Q--RIVL-VKNASGEFMKISMDPHGTRALQKLIECISTAEES-KLIIEALQPHIVILSRD 270
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL+ + +N+ FI+ A +CL +A H GC + +D +R+Q+
Sbjct: 271 LNGNHVVQKCLQNLKTSDNQ--FIFDAVCANCLAIATHRHGCCVLQRCLDHGDPLQRQQL 328
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
I+ NA L+ + GNYVVQ+VL D IE I ++ + I LSL K GS V++
Sbjct: 329 SLKIAENATKLAIDPFGNYVVQYVLSHGDDKSIEIILNHIKSNTIALSLHKFGSNVIEKS 388
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
L+ N ++E LLN + + D +GNYV+QT+L
Sbjct: 389 LRINKLSNQLIEVLLLNESRFEELLNDGFGNYVLQTSL 426
>gi|190347187|gb|EDK39419.2| hypothetical protein PGUG_03517 [Meyerozyma guilliermondii ATCC
6260]
Length = 721
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 145/289 (50%), Gaps = 17/289 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSG-----------DSRFLDKVFNVVSEFTFQIICNQYARFV 148
I L +D+ G ++LQ +L SG S +FN + ++ + + ++
Sbjct: 400 IYNLCKDQHGCRFLQRQLDSGGKENNGHGKEQSSVVATMIFNEIYLKIVDLMVDPFGNYL 459
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
K E + DQ R+ L + + F++ ++D G+ +++KL++ ++ L++K+
Sbjct: 460 IQKLFEHVSTDQ--RVIL-VKNAAPEFMRIALDSHGTRALQKLVECISTEEES-QLLIKS 515
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
L L G+ VV +CL+++ NN+ FI+ A HC +A H GC + +
Sbjct: 516 LSPHVVALSRDLNGNHVVQKCLQRLSAANNQ--FIFDTAAFHCNEIATHRHGCCVLQRCL 573
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
D +R Q+ ++ NA +LS + GNYVVQ+VL D IE + +R + + LSL
Sbjct: 574 DHGTMAQRAQLSLKVAQNATNLSFDPFGNYVVQYVLTRGDAKSIEIVLSHIRNNIVTLSL 633
Query: 329 TKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
K GS V++ L+ + ++E L N + + D YGNYV+QT+L
Sbjct: 634 HKFGSNVIEKSLRISTLTDTLIEVLLANQARFADMLNDAYGNYVLQTSL 682
>gi|440631710|gb|ELR01629.1| hypothetical protein GMDG_00005 [Geomyces destructans 20631-21]
Length = 1077
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 151/280 (53%), Gaps = 8/280 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL ++ + ++ ++ +++ + + ++ K +E CN++
Sbjct: 631 IYSLCKDQHGCRFLQKKLEERNAEQIHMIWLETNQHVVELMTDPFGNYLCQKLLEFCNDE 690
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + ++ SQD L + ++++ G+ +++K+++ ++ + +++AL+ L+
Sbjct: 691 ERT-VLIENASQDLLRI--ALNQHGTRALQKMIEFIST-AGQIQTIIEALRYQVVELIQD 746
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FI+ A HC+ + H GC + ID G ++ +
Sbjct: 747 LNGNHVIQKCLNKLSPLDAQ--FIFDAVGRHCVDVGTHRHGCCVLQRCIDHASGDQKAWL 804
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS NA +L ++ GNYVVQ++L+L +P E + G LS K S V++ C
Sbjct: 805 IRQISNNAFTLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVGQLSRQKFSSNVIEKC 864
Query: 340 LK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
L+ + + ++EE L + R+ D + NYV+QTAL
Sbjct: 865 LRCAQEPSKDMLIEEMLATPADLERLLRDSFANYVVQTAL 904
>gi|358396949|gb|EHK46324.1| hypothetical protein TRIATDRAFT_153608 [Trichoderma atroviride IMI
206040]
Length = 757
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 164/309 (53%), Gaps = 15/309 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL +S + ++ ++ +++ + + ++ K +E CN+D
Sbjct: 328 IYELCKDQHGCRYLQKKLEERNSDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 387
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ T+ I + Q ++++ G+ +++K+++ V+ P + L+++AL+ L+
Sbjct: 388 ER---TVLIQNASQRMEDIALNQHGTRALQKMIEYVST-PQQIHLIIEALRNRVVKLIKD 443
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAAL--EHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL ++ + + FI+ A + C+ + H GC + ID G ++
Sbjct: 444 LNGNHVIQKCLNKLTATDAQ--FIFDAVGNGDKCVEVGTHRHGCCVLQRCIDHATGEQKL 501
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ I+ +A L ++ GNYVVQ++++L +P E I +G LS K S V++
Sbjct: 502 WLIQRITEHARILVQDPFGNYVVQYIIDLNEPTFTEPIVGMFQGCIAQLSRHKFSSNVIE 561
Query: 338 NCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
CL+ + + IVEE LL+ ++ R+ D + NYVIQTAL E P H RLV
Sbjct: 562 KCLRCAQAPSKDMIVEE-LLSQPEMERLLRDSFANYVIQTAL-EFSTP---HQKYRLVEA 616
Query: 396 LQQNLDSLR 404
++ L +R
Sbjct: 617 IRPILPQIR 625
>gi|302412761|ref|XP_003004213.1| pumilio domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261356789|gb|EEY19217.1| pumilio domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 1157
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 172/336 (51%), Gaps = 15/336 (4%)
Query: 87 FQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYAR 146
+Q P +H I L +D+ G +YLQ+KL + + ++ ++ +++ + +
Sbjct: 757 YQNLPLEHVGGQ-IYELCKDQHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFGN 815
Query: 147 FVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVM 206
++ K +E CN+D+ + +Q +QD V+ ++++ G+ +++K+++ V + +++
Sbjct: 816 YLCQKLLEYCNDDERT-VLIQNAAQD--MVRIALNQHGTRALQKMIEFVTTSI-QVQMII 871
Query: 207 KALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNN 266
AL+ L+ G+ V+ +CL ++ + + FI+ A HC+ + H GC +
Sbjct: 872 DALRYRVVELIQDLNGNHVIQKCLNKLSAPDAQ--FIFDAVGNHCVDVGTHRHGCCVLQR 929
Query: 267 FIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
ID G ++ ++ I+ +A L ++ GNYVVQ++++L +P E + R L
Sbjct: 930 CIDHADGAQKVWLIGKITEHAPVLVQDPFGNYVVQYIIDLNEPAFTEPVVGMFRNRICQL 989
Query: 327 SLTKCGSFVVQNCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPN 384
S K S V++ L+ + IV+E LL ++ R+ D Y NYVIQTAL E P
Sbjct: 990 SRHKFSSNVIEKLLRCSQAQGRDMIVDE-LLQPGEMDRLLRDSYANYVIQTAL-EYATPE 1047
Query: 385 SLHLHQRLVTKLQQNLDSLR-FGYGKHVYNFIKDCD 419
H R+V ++ L ++R YG+ + ++ D
Sbjct: 1048 GKH---RMVEVIRPFLPAVRSTPYGRRIQAKVQAYD 1080
>gi|392597028|gb|EIW86350.1| ARM repeat-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 981
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 165/328 (50%), Gaps = 26/328 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVF-NVVSEFT-FQIICNQYARFVFGKFIETCN 157
I L +D+ G +YLQ+KL G D +F S F + + + ++ K +E
Sbjct: 537 IPALCKDQHGCRYLQKKLEEGVVEHRDMIFRETFSHFAELMTVLDPFGNYLCQKLLEYST 596
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
++Q + + +QD V S++ G+ +++K++ ++ R + +++ AL +L+
Sbjct: 597 DEQR-NLICESVAQD--LVNISLNMHGTRAVQKMIDFLSTRRQIHSIIL-ALSLHVVVLI 652
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + ID +R
Sbjct: 653 KDLNGNHVIQKCLNKLSPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQRI 710
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
Q++ I+ NA +L ++ GNYVVQ+VL+L D E + G+ LS+ K S V++
Sbjct: 711 QLVNEITYNALTLVQDPYGNYVVQYVLDLNDNRFSEGVIRQFTGNVCALSVQKFSSNVIE 770
Query: 338 NCLK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP-- 383
C++ + I+ E +LN ++ ++ D YGNY +QTA L+E +RP
Sbjct: 771 KCIRVAEHSTRKILIEEVLNRSRLEKLLRDSYGNYCVQTALDYAEASQRALLVEGIRPVL 830
Query: 384 ---NSLHLHQRLVTKLQ-QNLDSLRFGY 407
+ +R+ KLQ + +D+ GY
Sbjct: 831 PLIRNTPYGKRIQNKLQREQMDNFGGGY 858
>gi|429329361|gb|AFZ81120.1| pumilio-family RNA binding repeat domain-containing protein
[Babesia equi]
Length = 798
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 179/393 (45%), Gaps = 34/393 (8%)
Query: 28 DPSYSSFNEIHPSPPVPLYPQSTWAVPSLSGRSTVPN-----LSGTSNPQYETITSSNFQ 82
D S S N PPV + ++ P+ + N L G P Y I S F
Sbjct: 267 DDSRGSLNS--KGPPVSQHGKNPQQYPTKANNGKTKNNQKGGLGGI--PGYNWIKDSFFN 322
Query: 83 TPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICN 142
+Q N +L +AQD+ G + LQ +L D F+ + + V + ++ +
Sbjct: 323 ---------YQVLGN--VLTIAQDQTGCRMLQRQLEYNDENFIASILDEVIDHLVVLMTD 371
Query: 143 QYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLL 202
+ ++ K + C+ +QL RI I ++ F+ ++ G+ +I+KL++ V P +
Sbjct: 372 PFGNYLCQKLMTVCSSEQLGRI---IKGVEKDFLSICLNMHGTRAIQKLIEVVT-EPEHI 427
Query: 203 DLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCI 262
V L L+ G+ V+ +CL I + +FIY+A ++C+YLA H GC
Sbjct: 428 SFVTSVLSTAVVDLVNDLNGNHVIQKCL--ISLKSEDCEFIYKAMNDNCVYLATHRHGCC 485
Query: 263 NMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGH 322
M ID +R ++ IS L + GNYV+Q+VL L+D + I +L +
Sbjct: 486 VMQRCIDAANPQQRNMLIDTISSKTLDLVEDAFGNYVIQYVLRLKDDEINRRIVVALADN 545
Query: 323 YIDLSLTKCGSFVVQNCLKY-RITVNYIVEEFLLNS--DQIFRVACDKYGNYVIQTALIE 379
+ + K S VV+ CL + + V I+ LN D + + D +GNYVIQ L
Sbjct: 546 VTEFAKQKFSSNVVERCLIFCPLEVRSILISKFLNVPFDVLKELILDPFGNYVIQRVL-N 604
Query: 380 TMRPNSLHLHQRLVTKLQQNLDSLRFG-YGKHV 411
+ + L L+ ++Q +L+ L+ GK +
Sbjct: 605 VAQSDEL---SALLDRIQPHLEELKVASSGKRI 634
>gi|440472633|gb|ELQ41484.1| pumilio domain-containing protein, partial [Magnaporthe oryzae Y34]
gi|440485994|gb|ELQ65903.1| pumilio domain-containing protein, partial [Magnaporthe oryzae
P131]
Length = 811
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 174/325 (53%), Gaps = 18/325 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNV---VSEFTFQIICNQYARFVFGKFIETC 156
I L +D+ G +YLQ++L + R D+V + ++ +++ + + ++ K +E C
Sbjct: 355 IYELCKDQHGCRYLQKQL---EGRVPDQVHMIWLETNQHVVELMTDPFGNYLCQKLLEFC 411
Query: 157 NEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
NE++ + +Q SQD V+ ++++ G+ +++K+++ + N + +++++L+ L
Sbjct: 412 NEEERT-VLIQNASQD--MVRIALNQHGTRALQKMIEFI-NTEEQVQIIIESLRDRVVEL 467
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +CL ++ +++ FI+ A + + H GC + ID G ++
Sbjct: 468 IQDLNGNHVIQKCLNKLSCLHSQ--FIFDAVGAAAVEVGTHRHGCCVLQRCIDHASGDQK 525
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
++ I+ +A +L ++ GNYVVQ++++L +P E + RG LS K S V+
Sbjct: 526 VWLIARITEHAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVGMFRGRISFLSRHKFSSNVI 585
Query: 337 QNCLKYRITVNY-IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
+ CL+ V+ ++ E +L +I R+ D + NYVIQTAL E P + H RLV
Sbjct: 586 EKCLRCSADVSKDMIAEEILAPGEIERLIRDSFANYVIQTAL-EYSTPMTKH---RLVET 641
Query: 396 LQQNLDSLRFG-YGKHVYNFIKDCD 419
++ L ++R YG+ + I+ D
Sbjct: 642 IRPILPTVRSTPYGRRIQAKIQAFD 666
>gi|425771288|gb|EKV09735.1| hypothetical protein PDIP_63380 [Penicillium digitatum Pd1]
gi|425776819|gb|EKV15020.1| hypothetical protein PDIG_28960 [Penicillium digitatum PHI26]
Length = 1020
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 170/334 (50%), Gaps = 19/334 (5%)
Query: 91 PFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFG 150
P +H + L +D+ G +YLQ KL + + +F+ +++ + + ++
Sbjct: 598 PLEHYKGE-LYSLCKDQHGCRYLQRKLEERNQEHVQLIFSETYMHVIELMTDPFGNYLCQ 656
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K +E N++Q T I + V+ ++++ G+ +++K+++ ++ P V+ AL+
Sbjct: 657 KLLEYSNDEQR---TALINNAAPELVKIALNQHGTRALQKMIEFIST-PQQTQTVINALQ 712
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ +CL ++ + +FIY+A +C+ + H GC + ID
Sbjct: 713 YHVVDLVQDLNGNHVIQKCLNRLSPEDA--EFIYEAVGGNCVVVGTHRHGCCVLQRCIDH 770
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
G ++ +++ I+ ++ +L ++ GNYVVQ++L+L +P +C + G+ LS K
Sbjct: 771 ASGHQKARLISQITSHSFALVQDPFGNYVVQYILDLAEPSFTNPLCATFGGNIPQLSKQK 830
Query: 331 CGSFVVQNCLKYRITVNY----IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
S V++ CL R NY +++EFL+ +++ ++ D + NYV+QTA M L
Sbjct: 831 FSSNVIEKCL--RTADNYMKREMIDEFLM-GNELEKMLRDSFANYVVQTA----MDFCDL 883
Query: 387 HLHQRLVTKLQQNLDSLR-FGYGKHVYNFIKDCD 419
R+V ++ L S+R +G+ + I D
Sbjct: 884 ETRNRIVEAVRPILPSIRQTPHGRRIAGKIMAAD 917
>gi|389624159|ref|XP_003709733.1| RNA-binding protein [Magnaporthe oryzae 70-15]
gi|351649262|gb|EHA57121.1| RNA-binding protein [Magnaporthe oryzae 70-15]
Length = 1053
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 174/325 (53%), Gaps = 18/325 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNV---VSEFTFQIICNQYARFVFGKFIETC 156
I L +D+ G +YLQ++L + R D+V + ++ +++ + + ++ K +E C
Sbjct: 597 IYELCKDQHGCRYLQKQL---EGRVPDQVHMIWLETNQHVVELMTDPFGNYLCQKLLEFC 653
Query: 157 NEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
NE++ + +Q SQD V+ ++++ G+ +++K+++ + N + +++++L+ L
Sbjct: 654 NEEERT-VLIQNASQD--MVRIALNQHGTRALQKMIEFI-NTEEQVQIIIESLRDRVVEL 709
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +CL ++ +++ FI+ A + + H GC + ID G ++
Sbjct: 710 IQDLNGNHVIQKCLNKLSCLHSQ--FIFDAVGAAAVEVGTHRHGCCVLQRCIDHASGDQK 767
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
++ I+ +A +L ++ GNYVVQ++++L +P E + RG LS K S V+
Sbjct: 768 VWLIARITEHAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVGMFRGRISFLSRHKFSSNVI 827
Query: 337 QNCLKYRITVNY-IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
+ CL+ V+ ++ E +L +I R+ D + NYVIQTAL E P + H RLV
Sbjct: 828 EKCLRCSADVSKDMIAEEILAPGEIERLIRDSFANYVIQTAL-EYSTPMTKH---RLVET 883
Query: 396 LQQNLDSLR-FGYGKHVYNFIKDCD 419
++ L ++R YG+ + I+ D
Sbjct: 884 IRPILPTVRSTPYGRRIQAKIQAFD 908
>gi|402076055|gb|EJT71478.1| RNA-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1066
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 170/322 (52%), Gaps = 12/322 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ++L + + ++ ++ +++ + + ++ K +E CNE+
Sbjct: 612 IYELCKDQHGCRYLQKQLENRQPEHVHMIWLETNQHVVELMTDPFGNYLCQKLLEYCNEE 671
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ + +Q SQD V+ ++++ G+ +++K+++ + N + +++++L+ L+
Sbjct: 672 ERT-VLIQNASQD--MVRIALNQHGTRALQKMIEFI-NTDEQVQIIIESLRNRVVELIQD 727
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + ++ FI+ A + + + H GC + ID G ++ +
Sbjct: 728 LNGNHVIQKCLNKL--NCTQSQFIFDAVGKSAIDVGTHRHGCCVLQRCIDHASGDQKVWL 785
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ +A +L ++ GNYVVQ++++L +P E + RG LS K S V++ C
Sbjct: 786 IQRITEHAVALVQDPFGNYVVQYIIDLNEPSFTEPLVGMFRGRISALSRHKFSSNVIEKC 845
Query: 340 LK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
L+ + ++ E +L +I R+ D + NYVIQTAL + + RLV ++
Sbjct: 846 LRCAQDGSKDMIAEEILAPGEIERLLRDSFANYVIQTALEYSTH----YTKHRLVDAIRP 901
Query: 399 NLDSLRFG-YGKHVYNFIKDCD 419
L ++R YG+ + I+ D
Sbjct: 902 ILPNIRATPYGRRIQAKIQAFD 923
>gi|213405357|ref|XP_002173450.1| pumilio domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001497|gb|EEB07157.1| pumilio domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 532
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 172/351 (49%), Gaps = 12/351 (3%)
Query: 32 SSFNE--IHPSPPVPLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQA 89
S+F++ ++P+P + P VP+ + T+P+ S+ + + ++ Q P
Sbjct: 146 SAFDQFRLNPAPTLVSQPSPAPIVPTTPSKLTLPSPPPLSS-MHLSSPAAQLQKPPPIAI 204
Query: 90 NPFQ--HCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARF 147
PF + IL L D+ G + LQ L S D +DK+F EF ++ + + +
Sbjct: 205 TPFSILQLSYVQILALCHDQLGCRSLQRVLESNDPLVIDKIFRTTYEFIPNLMVDAFGNY 264
Query: 148 VFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMK 207
+ K E N+ Q I+S+ V S++ G+ +++K+++ V+ P +D V+K
Sbjct: 265 LCQKLFEHANDFQRTAFVKVISSK---LVPISLNMHGTRALQKVLELVS-LPEQIDCVVK 320
Query: 208 ALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNF 267
+L+ LL+ G+ V+ +CL Q +++ FIY A + + ++ H GC +
Sbjct: 321 SLQNNVVLLIKDLNGNHVIQKCLNQFSSEDSQ--FIYSAICRNIVEVSTHRHGCCVVQRC 378
Query: 268 IDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
D +R+ ++ I A L ++ GNYVVQ+VL+L++P + + LS
Sbjct: 379 FDHASPAQREMLVLHIIPVALELVQDAFGNYVVQYVLDLKEPVYTDAVIRKFLHKVRMLS 438
Query: 328 LTKCGSFVVQNCLKYRI-TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ K S V++ L + ++ + LL+ + R+ D++ NYV+QTAL
Sbjct: 439 VQKFSSNVMEKSLSMASDELRALLIDELLDKKHLSRLLKDQFANYVVQTAL 489
>gi|58265692|ref|XP_570002.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109369|ref|XP_776799.1| hypothetical protein CNBC2900 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259479|gb|EAL22152.1| hypothetical protein CNBC2900 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226234|gb|AAW42695.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 948
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 150/298 (50%), Gaps = 19/298 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+L L +D+ G +YLQ+KL GD + D +FN +++ + + ++ K +E E+
Sbjct: 451 LLSLCKDQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTEE 510
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALKRLFRLLM 217
Q I I S V S++ G+ +++K++ +A +P + ++ AL L+
Sbjct: 511 QRSAI---IDSVANDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALI 567
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL ++ +N+ FIY A + + +A H GC + ID +R
Sbjct: 568 KDLNGNHVIQKCLNKLIPEDNQ--FIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRM 625
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
Q++ I N+ L ++ GNYV+Q++L+L D E + + G+ LS+ K S VV+
Sbjct: 626 QLVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVE 685
Query: 338 NCLKYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT-----------ALIETMRP 383
C++ + ++ +LN ++ ++ D YGNYVIQT L+E +RP
Sbjct: 686 KCIRVADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTILDYCEIGQRMVLVECIRP 743
>gi|297852018|ref|XP_002893890.1| hypothetical protein ARALYDRAFT_473696 [Arabidopsis lyrata subsp.
lyrata]
gi|297339732|gb|EFH70149.1| hypothetical protein ARALYDRAFT_473696 [Arabidopsis lyrata subsp.
lyrata]
Length = 565
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 160/306 (52%), Gaps = 17/306 (5%)
Query: 102 LLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
L+A+D+ G + LQ+ + G +F+ + + ++ + + ++ K +E +E+Q
Sbjct: 257 LMAKDQIGCRVLQKLVEEGTVLDAKVIFHEIIDHVVELSMDPFGNYIVQKLLEVSDEEQR 316
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKP 221
I +TS+ + +Q ++ +G+ ++K+++ V + + LV LK F L+
Sbjct: 317 TLIVSVLTSKPRELIQICLNTYGTRVVQKMIETVKTKQQIA-LVKFGLKPGFLALVKDLN 375
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G+ V+ CL+ + ++NK F+ +AA ++C +A H GC + + G +R++++
Sbjct: 376 GNHVIQSCLQTLGPNDNK--FVLEAATKYCAEIAIHRHGCCVLQCCLSNSVGLQRERLVA 433
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL- 340
IS NA LS++ GNYVVQ+++E + + + F R HY +L+ K S V++ CL
Sbjct: 434 EISRNALHLSQDPFGNYVVQYLIEQQVSAVKLLVRF--RMHYAELATQKFSSHVIEKCLR 491
Query: 341 KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNL 400
KY + IV E + + + + D Y NYVIQTAL T P + +LV K+
Sbjct: 492 KYPESRAEIVRELICVPNFEYLLQ-DPYANYVIQTALSVTKGP----VRAKLVEKV---- 542
Query: 401 DSLRFG 406
RFG
Sbjct: 543 --YRFG 546
>gi|242036643|ref|XP_002465716.1| hypothetical protein SORBIDRAFT_01g044430 [Sorghum bicolor]
gi|241919570|gb|EER92714.1| hypothetical protein SORBIDRAFT_01g044430 [Sorghum bicolor]
Length = 716
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 38/310 (12%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +A+D+ G +YLQ+K G +D +F + ++ + + ++ K +E C+E
Sbjct: 425 IYHMAKDQNGCRYLQDKFLEG-KHHVDAIFEGIINHIADLMISSFGNYLVQKMLEVCDEG 483
Query: 160 QLLRITLQITSQDQL--FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
Q LRI L +T QD + + S++ G+ +++L++ V +R ++ L++ AL+ F LL+
Sbjct: 484 QRLRIILVLT-QDPVKQLIAISLNTHGTRVVQRLIETVRSRDQII-LIISALQPNFMLLV 541
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL +NK CI+ +G +
Sbjct: 542 NDPNGNHVIQKCLTNFGAEDNKR--------------------CIS------NARGVYQA 575
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ I L+++ GNYVVQ+VLEL+ P + G YI LS K S VV+
Sbjct: 576 NLIVEICARGFELAQDPFGNYVVQYVLELKIPSANAHLASQFEGKYIYLSKQKVSSNVVE 635
Query: 338 NCLKY--RITVNYIVEEFLLNSDQIF-RVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
CLK+ IV E LL S F ++ D Y NYVI TAL+ T HLH LV
Sbjct: 636 RCLKFFPDDAKAVIVHELLLLSGSHFEQLLQDPYANYVIYTALLHT----KGHLHNALVE 691
Query: 395 KLQQNLDSLR 404
++ + D++R
Sbjct: 692 AIRPHEDAIR 701
>gi|340517824|gb|EGR48067.1| RNA binding protein [Trichoderma reesei QM6a]
Length = 661
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 170/326 (52%), Gaps = 21/326 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNV---VSEFTFQIICNQYARFVFGKFIETC 156
I L +D+ G +YLQ+KL + +++V + ++ +++ + + ++ K +E C
Sbjct: 318 IYELCKDQYGCRYLQKKLE--ERVHMNQVHMIWLETNQHVIELMTDPFGNYLCQKLLELC 375
Query: 157 NEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
N+D+ + +Q SQD V+ ++++ G+ +++K+++ V+ P + L+++AL+ L
Sbjct: 376 NDDERT-VLIQNASQD--MVRIALNQHGTRALQKMIETVST-PQQVHLIIEALRYRVVQL 431
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +CL ++ + + FI+ A E C+ + H GC + ID G ++
Sbjct: 432 IQDLNGNHVIQKCLNKLTASDAQ--FIFDAVGEKCVEVGTHRHGCCVLQRCIDHATGDQK 489
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
++ I+ +A L ++ GNYVVQ++++L +P E I S G LS K S V+
Sbjct: 490 LWLIQCITKDARILVQDPFGNYVVQYIIDLHEPTFTEPIVASFEGCISMLSRHKFSSNVI 549
Query: 337 QNCLK--YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
+ CL+ + + IV E L + + + D + NYV+QTAL + + L RLV
Sbjct: 550 EKCLRCAQPPSKDMIVSELLGDIEGCLQ---DSFANYVVQTALDFS----TPQLKHRLVE 602
Query: 395 KLQQNLDSLRFG-YGKHVYNFIKDCD 419
++ L +R YG+ + I D
Sbjct: 603 AIRPVLPKIRTTPYGRRIQAKIAAYD 628
>gi|388855017|emb|CCF51344.1| uncharacterized protein [Ustilago hordei]
Length = 1013
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 161/320 (50%), Gaps = 24/320 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL D +F+ +++ + + ++ K +E C ++
Sbjct: 535 IFALCKDQHGCRFLQKKLEESMPAHRDMIFSETFTHFAELMTDPFGNYLCQKMLEYCTDE 594
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q I + + V S++ G+ +++K++ ++ R + +++ AL L+
Sbjct: 595 QRNLIVELVAPE---LVTISLNMHGTRAVQKMIDFLSTRRQIHSIIV-ALSMNVVTLIKD 650
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL ++ +N+ FIY A HC+ +A H GC + ID +R Q+
Sbjct: 651 LNGNHVVQKCLNRLGAEDNQ--FIYNAVAAHCVEVATHRHGCCVLQRCIDHASESQRVQL 708
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA +L ++ GNYVVQ+VL+L P + + G+ LS+ K S V++ C
Sbjct: 709 VAEITYNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSSNVIEKC 768
Query: 340 LKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP---- 383
++ V + E LLN ++ ++ D + NYV+QT+ L+E +RP
Sbjct: 769 IRVSEPGVRKQLIEELLNRTRLEKLLRDSFANYVVQTSLDYADAVQRMRLVECIRPILPV 828
Query: 384 -NSLHLHQRLVTKLQQ-NLD 401
+ +R+ +KLQ+ NLD
Sbjct: 829 IRNTPYGKRIQSKLQRDNLD 848
>gi|385303007|gb|EIF47109.1| member of the puf protein family [Dekkera bruxellensis AWRI1499]
Length = 435
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 141/296 (47%), Gaps = 24/296 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ +L G K+FN + +++ + + ++ K +E NE
Sbjct: 34 IYYLCKDQHGCRFLQRQLEVGGPEAATKIFNEIQLNVIELMIDPFGNYLIQKLLERVNEK 93
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +SQ FV+ ++D G+ +++KL++ V N +++ +L LL
Sbjct: 94 QRTTLVRNASSQ---FVRIALDPHGTRALQKLVECV-NTKEEFQIIVSSLSSYVVLLSRD 149
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+++ + +FI+ AA EHC+ +A H GC + D + + +
Sbjct: 150 LNGNHVIQKCLQKL--PPSSCNFIFDAACEHCVKIAKHRHGCCVLQRCFDHGSPAQCENL 207
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYL------------------IETICFSLRG 321
+ N LS + GNYVVQ+VL +E+ L I I +LR
Sbjct: 208 SLKVGENXVELSTDPYGNYVVQYVLSMEETRLRSQHDEEAVANTPDTSKAIGLIITALRD 267
Query: 322 HYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ + LS K GS VV+ L+ ++ + L D + D YGNYV+QT L
Sbjct: 268 NLVRLSTHKFGSNVVEKSLRIPTLAPVLIGQLLKEPDIPIILLHDAYGNYVLQTTL 323
>gi|443895829|dbj|GAC73174.1| translational repressor MPT5/PUF4 and related RNA-binding proteins
[Pseudozyma antarctica T-34]
Length = 671
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 160/320 (50%), Gaps = 24/320 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ+KL + D +F+ +++ + + ++ K +E C ++
Sbjct: 234 IFALCKDQHGCRFLQKKLEESNGAHRDMIFSETFSHFAELMTDPFGNYLCQKMLEYCTDE 293
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q I + + V S++ G+ +++K++ ++ P + ++ AL L+
Sbjct: 294 QRNLIVELVAPE---LVTISLNMHGTRAVQKMIDFLST-PRQIHSIIVALSMNVVTLIKD 349
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL ++ +N+ FIY A HC+ +A H GC + ID +R Q+
Sbjct: 350 LNGNHVVQKCLNRLGAEDNQ--FIYNAVAAHCVEVATHRHGCCVLQRCIDHASESQRVQL 407
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA +L ++ GNYVVQ+VL+L + + G+ LS+ K S V++ C
Sbjct: 408 VAEITYNALTLVQDPFGNYVVQYVLDLSIARFTDAVVRQFVGNVCLLSVQKFSSNVMEKC 467
Query: 340 LKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP---- 383
++ V + E LLN ++ ++ D Y NYV+QT+ L+E +RP
Sbjct: 468 IRVSEPGVRKQLIEELLNRARLEKLLRDSYANYVVQTSLDYADPVQRMRLVECIRPILPV 527
Query: 384 -NSLHLHQRLVTKLQQ-NLD 401
+ +R+ +KLQ+ NLD
Sbjct: 528 IRNTPYGKRIQSKLQRDNLD 547
>gi|405119110|gb|AFR93883.1| pumilio-family RNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 981
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 150/298 (50%), Gaps = 19/298 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+L L +D+ G +YLQ+KL GD + D +FN +++ + + ++ K +E E+
Sbjct: 451 LLSLCKDQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTEE 510
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALKRLFRLLM 217
Q I I S V S++ G+ +++K++ +A +P + ++ AL L+
Sbjct: 511 QRSAI---IDSVANDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALI 567
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL ++ +N+ FIY A + + +A H GC + ID +R
Sbjct: 568 KDLNGNHVIQKCLNKLIPEDNQ--FIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRM 625
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
Q++ I N+ L ++ GNYV+Q++L+L D E + + G+ LS+ K S VV+
Sbjct: 626 QLVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVE 685
Query: 338 NCLKYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT-----------ALIETMRP 383
C++ + ++ +LN ++ ++ D YGNYVIQT L+E +RP
Sbjct: 686 KCIRVADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTILDYCEIGQRMVLVECIRP 743
>gi|321254126|ref|XP_003192973.1| RNA-binding protein of the pumilio family [Cryptococcus gattii
WM276]
gi|317459442|gb|ADV21186.1| RNA-binding protein of the pumilio family, putative [Cryptococcus
gattii WM276]
Length = 950
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 150/298 (50%), Gaps = 19/298 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+L L +D+ G +YLQ+KL GD + D +FN +++ + + ++ K +E E+
Sbjct: 452 LLSLCKDQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTEE 511
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALKRLFRLLM 217
Q I I S V S++ G+ +++K++ +A +P + ++ AL L+
Sbjct: 512 QRSAI---IDSVANDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALI 568
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL ++ +N+ FIY A + + +A H GC + ID +R
Sbjct: 569 KDLNGNHVIQKCLNKLIPEDNQ--FIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRM 626
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
Q++ I N+ L ++ GNYV+Q++L+L D E + + G+ LS+ K S VV+
Sbjct: 627 QLVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVE 686
Query: 338 NCLKYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT-----------ALIETMRP 383
C++ + ++ +LN ++ ++ D YGNYVIQT L+E +RP
Sbjct: 687 KCIRVADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTILDYCEIGQRMVLVECIRP 744
>gi|150863841|ref|XP_001382453.2| hypothetical protein PICST_66941 [Scheffersomyces stipitis CBS
6054]
gi|149385097|gb|ABN64424.2| RNA binding protein [Scheffersomyces stipitis CBS 6054]
Length = 794
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 148/293 (50%), Gaps = 21/293 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSG---------DSRFLDK------VFNVVSEFTFQIICNQY 144
I L +D+ G ++LQ +L G DS L +FN + +++ + +
Sbjct: 469 IFSLCKDQHGCRFLQRQLDLGREVAEGRNTDSSVLSNDIAATMIFNEIYLKIVELMTDPF 528
Query: 145 ARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDL 204
++ K E + DQ RI L + + F++ ++D G+ +++KL++ ++ L
Sbjct: 529 GNYLIQKLFENVSVDQ--RIIL-VKNAAPEFIRIALDPHGTRALQKLVECISTEEES-KL 584
Query: 205 VMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINM 264
++ +L L G+ VV +CL+++ N+ FI++ A HC +A H GC +
Sbjct: 585 IIGSLSPHIVSLSRDLNGNHVVQKCLQKLKPEENQ--FIFETASLHCNEIATHRHGCCVL 642
Query: 265 NNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYI 324
+D +R+Q+ ++ NA +LS + GNYVVQ+VL D I+ I ++ + I
Sbjct: 643 QRCLDHGNSDQRRQLSLKVAENATNLSLDPFGNYVVQYVLSRGDEGSIQIIMDHIKSNII 702
Query: 325 DLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
LSL K GS V++ L+ N +++ L + D+ + D +GNYV+QT+L
Sbjct: 703 SLSLHKFGSNVIEKSLRINKLTNTLIDVLLKHQDRFSDMLNDAFGNYVLQTSL 755
>gi|302505595|ref|XP_003014504.1| RNA-binding protein, putative [Arthroderma benhamiae CBS 112371]
gi|291178325|gb|EFE34115.1| RNA-binding protein, putative [Arthroderma benhamiae CBS 112371]
Length = 1094
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 152/298 (51%), Gaps = 22/298 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I + +D+ G +YLQ KL G + +F +++ + + ++ K +E N++
Sbjct: 673 IYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTNDE 732
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R L + L VQ ++++ G+ +++K+++ ++ P + V+ AL L+
Sbjct: 733 Q--RTGLINIAAPHL-VQIALNQHGTRALQKMIEFIST-PEQIQTVIHALSGQVVELVQD 788
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FIY A + C+ + H GC + ID G +R ++
Sbjct: 789 LNGNHVIQKCLNRLSAPDAQ--FIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKL 846
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ ++ SL ++ GNYV+Q++L+L +P +C + +G LS K S V++ C
Sbjct: 847 IEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKC 906
Query: 340 LK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++ + + +I E +L+ ++ + D + NYVIQTA LIE +RP
Sbjct: 907 IRTSDFNMRRAFIKE--MLSPHELPNMLRDSFANYVIQTAMDFADPESRNTLIEAVRP 962
>gi|302657003|ref|XP_003020235.1| RNA-binding protein, putative [Trichophyton verrucosum HKI 0517]
gi|291184046|gb|EFE39617.1| RNA-binding protein, putative [Trichophyton verrucosum HKI 0517]
Length = 927
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 151/298 (50%), Gaps = 22/298 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I + +D+ G +YLQ KL G + +F +++ + + ++ K +E N++
Sbjct: 506 IYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTNDE 565
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R L I VQ ++++ G+ +++K+++ ++ P + V+ AL L+
Sbjct: 566 Q--RTGL-INIAAPHLVQIALNQHGTRALQKMIEFIST-PEQIQTVIHALSGQVVELVQD 621
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FIY A + C+ + H GC + ID G +R ++
Sbjct: 622 LNGNHVIQKCLNRLSAPDAQ--FIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKL 679
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ ++ SL ++ GNYV+Q++L+L +P +C + +G LS K S V++ C
Sbjct: 680 IEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKC 739
Query: 340 LK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++ + + +I E +L+ ++ + D + NYVIQTA LIE +RP
Sbjct: 740 IRTSDFNMRRAFIKE--MLSPHELPNMLRDSFANYVIQTAMDFADPESRNTLIEAVRP 795
>gi|327300785|ref|XP_003235085.1| pumilio-family RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326462437|gb|EGD87890.1| pumilio-family RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 1049
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 152/298 (51%), Gaps = 22/298 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I + +D+ G +YLQ KL G + +F +++ + + ++ K +E N++
Sbjct: 628 IYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTNDE 687
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R L + L VQ ++++ G+ +++K+++ ++ P + V+ AL L+
Sbjct: 688 Q--RTGLINIAAPHL-VQIALNQHGTRALQKMIEFIST-PEQIQTVIHALSGQVVELVQD 743
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FIY A + C+ + H GC + ID G +R ++
Sbjct: 744 LNGNHVIQKCLNRLSAPDAQ--FIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKL 801
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ ++ SL ++ GNYV+Q++L+L +P +C + +G LS K S V++ C
Sbjct: 802 IEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKC 861
Query: 340 LK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++ + + +I E +L+ ++ + D + NYVIQTA LIE +RP
Sbjct: 862 IRTSDFNMRRAFIKE--MLSPHELPNMLRDSFANYVIQTAMDFADPESRNTLIEAVRP 917
>gi|344231266|gb|EGV63148.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 387
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 20/292 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGD--------SRFLDK------VFNVVSEFTFQIICNQYA 145
I L +D+ G ++LQ +L G + L +FN + +++ + +
Sbjct: 62 IFSLCKDQHGCRFLQRQLDLGKDIENKQNANNILSSDIAATMIFNEIYLKIIELMIDPFG 121
Query: 146 RFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLV 205
++ K E + DQ RI L + + F++ ++D G+ +++KL++ ++ L+
Sbjct: 122 NYLIQKLFENVSVDQ--RIIL-VKNAAPDFIRIALDPHGTRALQKLVECISTEAEC-KLI 177
Query: 206 MKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMN 265
+ L L G+ VV +CL+++ + +N FI+ A HC +A H GC +
Sbjct: 178 IDNLSPHIVSLSRDLNGNHVVQKCLQKLS--SKQNQFIFDTASSHCNDIATHRHGCCVLQ 235
Query: 266 NFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYID 325
+D +RKQ+ I+ NA +LS + GNYVVQ+VL D + I ++ H I
Sbjct: 236 RCLDYGNAAQRKQLSSKIAENATNLSLDPFGNYVVQYVLSRGDEQSVAIILNHIKSHLIV 295
Query: 326 LSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
LSL K GS V++ L+ N +V+ L+N+D + D +GNYV+QT+L
Sbjct: 296 LSLHKFGSNVIEKSLRISKLTNGLVQALLMNADHFQDLLNDPFGNYVLQTSL 347
>gi|303319247|ref|XP_003069623.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240109309|gb|EER27478.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1003
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 24/296 (8%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL + +F +++ + + ++ K +E N++Q
Sbjct: 589 LCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSNDEQ-- 646
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V ++++ G+ +++K+++ ++ P V+KAL+ L+ G
Sbjct: 647 RTALINNAAPQL-VSIALNQHGTRALQKMIEFIST-PEQTQTVIKALRDKVVDLVQDLNG 704
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A C+ + H GC + ID G +R Q++
Sbjct: 705 NHVIQKCLNRLSAADAQ--FIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQRAQLIAQ 762
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ ++ +L ++ GNYVVQ++L+L +P E +C + G LS K S V++ CL+
Sbjct: 763 ITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCLR- 821
Query: 343 RITVNYIVEEFLLNS----DQIFRVACDKYGNYVIQT-----------ALIETMRP 383
T ++ L+ +++ R+ D + NYV+QT ALIE +RP
Sbjct: 822 --TADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAMDYADPETRVALIEAVRP 875
>gi|146416333|ref|XP_001484136.1| hypothetical protein PGUG_03517 [Meyerozyma guilliermondii ATCC
6260]
Length = 721
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 144/289 (49%), Gaps = 17/289 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSG-----------DSRFLDKVFNVVSEFTFQIICNQYARFV 148
I L +D+ G ++LQ +L G S +FN + ++ + + ++
Sbjct: 400 IYNLCKDQHGCRFLQRQLDLGGKENNGHGKEQSSVVATMIFNEIYLKIVDLMVDPFGNYL 459
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
K E + DQ R+ L + + F++ ++D G+ +++KL++ ++ L++K+
Sbjct: 460 IQKLFEHVSTDQ--RVIL-VKNAAPEFMRIALDSHGTRALQKLVECISTEEES-QLLIKS 515
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
L L G+ VV +CL+++ NN+ FI+ A HC +A H GC + +
Sbjct: 516 LSPHVVALSRDLNGNHVVQKCLQRLSAANNQ--FIFDTAAFHCNEIATHRHGCCVLQRCL 573
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
D +R Q+ ++ NA +LS + GNYVVQ+VL D IE + +R + + LSL
Sbjct: 574 DHGTMAQRAQLSLKVAQNATNLSFDPFGNYVVQYVLTRGDAKSIEIVLSHIRNNIVTLSL 633
Query: 329 TKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
K GS V++ L+ + ++E L N + + D YGNYV+QT+L
Sbjct: 634 HKFGSNVIEKSLRISTLTDTLIEVLLANQARFADMLNDAYGNYVLQTSL 682
>gi|320040960|gb|EFW22893.1| RNA-binding protein [Coccidioides posadasii str. Silveira]
Length = 1023
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 24/296 (8%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL + +F +++ + + ++ K +E N++Q
Sbjct: 609 LCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSNDEQ-- 666
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V ++++ G+ +++K+++ ++ P V+KAL+ L+ G
Sbjct: 667 RTALINNAAPQL-VSIALNQHGTRALQKMIEFIST-PEQTQTVIKALRDKVVDLVQDLNG 724
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A C+ + H GC + ID G +R Q++
Sbjct: 725 NHVIQKCLNRLSAADAQ--FIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQRAQLIAQ 782
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ ++ +L ++ GNYVVQ++L+L +P E +C + G LS K S V++ CL+
Sbjct: 783 ITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCLR- 841
Query: 343 RITVNYIVEEFLLNS----DQIFRVACDKYGNYVIQT-----------ALIETMRP 383
T ++ L+ +++ R+ D + NYV+QT ALIE +RP
Sbjct: 842 --TADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAMDYADPETRVALIEAVRP 895
>gi|392865282|gb|EAS31064.2| RNA-binding protein [Coccidioides immitis RS]
Length = 1023
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 24/296 (8%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL + +F +++ + + ++ K +E N++Q
Sbjct: 609 LCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSNDEQ-- 666
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V ++++ G+ +++K+++ ++ P V+KAL+ L+ G
Sbjct: 667 RTALINNAAPQL-VSIALNQHGTRALQKMIEFIST-PEQTQTVIKALRDKVVDLVQDLNG 724
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A C+ + H GC + ID G +R Q++
Sbjct: 725 NHVIQKCLNRLSAADAQ--FIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQRAQLIAQ 782
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ ++ +L ++ GNYVVQ++L+L +P E +C + G LS K S V++ CL+
Sbjct: 783 ITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCLR- 841
Query: 343 RITVNYIVEEFLLNS----DQIFRVACDKYGNYVIQT-----------ALIETMRP 383
T ++ L+ +++ R+ D + NYV+QT ALIE +RP
Sbjct: 842 --TADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAMDYADPETRVALIEAVRP 895
>gi|326479871|gb|EGE03881.1| RNA-binding protein [Trichophyton equinum CBS 127.97]
Length = 1049
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 152/298 (51%), Gaps = 22/298 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I + +D+ G +YLQ KL G + +F +++ + + ++ K +E N++
Sbjct: 628 IYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQIHVVELMTDPFGNYLCQKLLEFTNDE 687
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R L + L VQ ++++ G+ +++K+++ ++ P + V+ AL L+
Sbjct: 688 Q--RTGLINIAAPHL-VQIALNQHGTRALQKMIEFIST-PEQIQTVIHALSGQVVELVQD 743
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FIY A + C+ + H GC + ID G +R ++
Sbjct: 744 LNGNHVIQKCLNRLSAPDAQ--FIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKL 801
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ ++ SL ++ GNYV+Q++L+L +P +C + +G LS K S V++ C
Sbjct: 802 IEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKC 861
Query: 340 LK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++ + + +I E +L+ ++ + D + NYVIQTA LIE +RP
Sbjct: 862 IRTSDFNMRRAFIKE--MLSPHELPNMLRDSFANYVIQTAMDFADPESRNTLIEAVRP 917
>gi|403224139|dbj|BAM42269.1| RNA-binding protein Puf1 [Theileria orientalis strain Shintoku]
Length = 700
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 157/319 (49%), Gaps = 21/319 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +AQD+ G + LQ +L D +F+ V N V + + ++ + + ++ K + C+ D
Sbjct: 224 VVSIAQDQTGCRMLQRQLECNDHQFIASVLNEVLDNLYMLMTDPFGNYLCQKLMSVCDSD 283
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
QL +I ITS + F+ ++ G+ +I+KL++ V + + L L+
Sbjct: 284 QLGKI---ITSCEPQFISICLNMHGTRAIQKLIEVVTEEN--ITRITSILSTGVVDLVND 338
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + + DFIY+A E+C+YLA H GC M ID +R ++
Sbjct: 339 LNGNHVIQKCLVSL--SSEHCDFIYKAMNENCVYLATHRHGCCVMQRCIDAASPAQRAKL 396
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS L + GNYV+Q+VL L+D + I L + K S VV+ C
Sbjct: 397 IDTISSKTLELVEDAYGNYVIQYVLRLKDDAINSRIVAFLCEDVTKFAKQKFSSNVVERC 456
Query: 340 LKY-----RITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
L + R T ++ +FL + D + + D +GNYVIQ L +P+ L L+
Sbjct: 457 LIFCPLEVRST---LISKFLNVPFDVLKDLILDPFGNYVIQRVL-NVAQPDEL---TSLL 509
Query: 394 TKLQQNLDSLRFG-YGKHV 411
+Q +L+ L+ GK +
Sbjct: 510 DSIQPHLEELKVASSGKRI 528
>gi|255538126|ref|XP_002510128.1| RNA binding protein, putative [Ricinus communis]
gi|223550829|gb|EEF52315.1| RNA binding protein, putative [Ricinus communis]
Length = 542
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 160/322 (49%), Gaps = 17/322 (5%)
Query: 104 AQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLR 163
A+D+ G + +++ L + +D V + + +++ + + +V K +E C+E+Q R
Sbjct: 220 AKDQFGCKLVRKALENVTHEKIDMVLLEIIDSVAELMPHPFGNYVVQKLVEVCSEEQRTR 279
Query: 164 ITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL-------LDLVMKALKRLFRLL 216
I L +T + V ++ G+ +++KL++ +A+ + + L+M AL L
Sbjct: 280 ILLAVTKNEVQLVSICLNMHGTRAVQKLLEGIASTQQVSITARQQVSLIMSALSSGAVEL 339
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
G V+ CLE +NK ++ + ++C +A + GC + +D G R
Sbjct: 340 AKDMNGHHVIKYCLEHFLPEDNK--YLLKVVADNCFDIATDKSGCCVLQQCVDHSMGEPR 397
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+++ I+ A L+++ GNYV+QH+L L +P + + L G++ LS K GS VV
Sbjct: 398 DRLVASITNIALRLAQDRYGNYVIQHLLGLRNPLITANLFRQLEGYFAVLSCDKFGSNVV 457
Query: 337 QNCL--KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
+ CL I+ E LL S + D YGN+VIQ+AL + + + ++
Sbjct: 458 EKCLLESRAEQCTQIISE-LLRSPCSSMLLVDPYGNFVIQSAL----KVSKGLVQGAMLE 512
Query: 395 KLQQNLDSLRFG-YGKHVYNFI 415
++QN+ ++R YG+ + ++
Sbjct: 513 LIRQNIPAMRSSIYGRKLLAWL 534
>gi|326468643|gb|EGD92652.1| RNA-binding protein [Trichophyton tonsurans CBS 112818]
Length = 1049
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 152/298 (51%), Gaps = 22/298 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I + +D+ G +YLQ KL G + +F +++ + + ++ K +E N++
Sbjct: 628 IYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQIHVVELMTDPFGNYLCQKLLEFTNDE 687
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R L + L VQ ++++ G+ +++K+++ ++ P + V+ AL L+
Sbjct: 688 Q--RTGLINIAAPHL-VQIALNQHGTRALQKMIEFIST-PEQIQTVIHALSGQVVELVQD 743
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FIY A + C+ + H GC + ID G +R ++
Sbjct: 744 LNGNHVIQKCLNRLSAPDAQ--FIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKL 801
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ ++ SL ++ GNYV+Q++L+L +P +C + +G LS K S V++ C
Sbjct: 802 IEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKC 861
Query: 340 LK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++ + + +I E +L+ ++ + D + NYVIQTA LIE +RP
Sbjct: 862 IRTSDFNMRRAFIKE--MLSPHELPNMLRDSFANYVIQTAMDFADPESRNTLIEAVRP 917
>gi|393218870|gb|EJD04358.1| ARM repeat-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1018
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL G++ D +F +++ + + ++ K +E +D
Sbjct: 541 IASLCKDQHGCRYLQKKLEEGNAEHRDMIFRETFGHFAELMTDPFGNYLCQKLLEYSTDD 600
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL-------LDLVMKALKRL 212
Q + + +QD V S++ G+ +++K++ ++ + + ++ AL
Sbjct: 601 QR-NVICESVAQD--LVNISLNMHGTRAVQKMIDFLSTQRQADLRYNAQIHSIIVALSLH 657
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
+L+ G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + ID
Sbjct: 658 VVVLIKDLNGNHVIQKCLNKLTPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCIDHAS 715
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+R Q++ I+ NA +L ++ GNYVVQ++L+L D + + G+ LS+ K
Sbjct: 716 DHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFS 775
Query: 333 SFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIE 379
S V++ C++ T ++EE LLN ++ ++ D +GNY +QTA L+E
Sbjct: 776 SNVIEKCIRVAEHNTRKMLIEE-LLNRTRLEKLLRDSFGNYCVQTALDYAESGQRALLVE 834
Query: 380 TMRP-----NSLHLHQRLVTKLQQNLDSLRFGYGKHVYN 413
+RP + +R+ +KLQ+ L G YN
Sbjct: 835 GIRPILPLIRNTPYGKRIQSKLQREQMELANANGMGHYN 873
>gi|356518120|ref|XP_003527730.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 508
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 143/281 (50%), Gaps = 8/281 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+LLLA D+ + LQE + +F + ++ + + +V + +E C E+
Sbjct: 186 VLLLATDQHECRTLQETMRKLTREEFYIIFLELINHVTDLMVDPFGNYVVQRMVEICTEE 245
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
QL +I L + + V+ + G + KL++ V + DLV+ AL +L
Sbjct: 246 QLSQIVLSLAQCNFQLVRICLSAHGIRGVEKLLERVTTQEQR-DLVLSALCPGAAILAKD 304
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G V+L CL+Q +N+N + C +A + GC+ + I+ +G ++++
Sbjct: 305 VNGHRVLLHCLKQFSGEDNEN--LLNVVANKCFEIATDKTGCVVLQQCINHAQGETKQKL 362
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I ++ + L+ + GNYVVQH+L L+ P + E++ L+G + L+ K GS VV+
Sbjct: 363 LDAIILHVSLLAEDCYGNYVVQHLLSLKVPGVAESLLIQLKGRFFYLACNKYGSNVVERF 422
Query: 340 LK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
L+ + + + ++E LL++ + + D YGNYVI++AL
Sbjct: 423 LQDSGEKHSTSIVLE--LLHNPNVAMLLVDPYGNYVIKSAL 461
>gi|328853049|gb|EGG02190.1| hypothetical protein MELLADRAFT_24024 [Melampsora larici-populina
98AG31]
Length = 325
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 143/277 (51%), Gaps = 9/277 (3%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ+KL G+ D +F + +++ + + ++ K +E ++Q
Sbjct: 20 LCKDQHGCRFLQKKLEEGEPTHRDMIFAEIYPHFGELMTDAFGNYLSQKLLEYSTDEQR- 78
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
L I S V S++ G+ +++K++ ++ + + L++ AL L+ G
Sbjct: 79 --DLLIESISGELVSISLNMHGTRAVQKMIDFLSTQRQVQSLII-ALNLNVVTLIKDLNG 135
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL + +N+ FIY A +C+ +A H GC + ID +R Q++
Sbjct: 136 NHVIQKCLNHLPPEDNQ--FIYNAVAANCIEVATHRHGCCVLQRCIDHASESQRIQLVTE 193
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ N+ SL ++ GNYVVQ+VL+L D IE I G+ LS+ K S VV+ C++
Sbjct: 194 ITYNSLSLVQDPFGNYVVQYVLDLNDSRFIEAIVRQFLGNVCALSMQKFSSNVVEKCIRV 253
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+VEE L ++ R+ D + NYV+QTAL
Sbjct: 254 SDPAGRRALVEE-LSGRQRLERLLRDSFANYVVQTAL 289
>gi|296086803|emb|CBI32952.3| unnamed protein product [Vitis vinifera]
Length = 275
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 128/238 (53%), Gaps = 6/238 (2%)
Query: 142 NQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL 201
N + ++ K ++ CNE+Q ++I + +T + V+ S++ G+ ++KL++ + R +
Sbjct: 3 NPFGNYLMQKLLDVCNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIETLKTRQQI 62
Query: 202 LDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGC 261
V+ AL+ F L+ G+ V+ +CL+ + +NK FI+ AA ++C+ +A H+ GC
Sbjct: 63 -SRVISALEPGFLALIKDLNGNHVIQRCLQCLSKEDNK--FIFVAAAKYCVEIATHQHGC 119
Query: 262 INMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRG 321
+ I G R+ ++ IS N L+++ GNYVVQ +LEL+ P + G
Sbjct: 120 CVLQRCISHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEG 179
Query: 322 HYIDLSLTKCGSFVVQNCLKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+Y+ LS + S VV+ CL N IV E LL++ ++ + NYVIQ AL
Sbjct: 180 NYVHLSTQRFSSHVVEKCLTVCTEENQSRIVHE-LLSTSHFEQLLQHPHANYVIQKAL 236
>gi|353234716|emb|CCA66738.1| related to Drosophila pumilio protein and Mpt5p protein
[Piriformospora indica DSM 11827]
Length = 980
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 161/317 (50%), Gaps = 25/317 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L+ +D+ G ++LQ+KL G D +F + +++ + + ++ K +E ++
Sbjct: 526 IPLMCKDQHGCRFLQKKLEEGVPEHRDIIFRETFKHFAELMTDPFGNYLCQKLLEYSTDE 585
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q I + V S++ G+ +++K++ ++ + ++ +++AL L+
Sbjct: 586 QRNLICESVAGD---LVTISLNMHGTRAVQKMIDFLSTQRQIV-AIIRALSLHVVTLIKD 641
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ +N+ FIY A HC+ +A H GC + ID +R Q+
Sbjct: 642 LNGNHVIQKCLNRLVPEDNQ--FIYNAVATHCVEVATHRHGCCVLQRCIDHASETQRLQL 699
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ +A +L ++ GNYVVQ++L+L D + + G+ LS+ K S V++ C
Sbjct: 700 VTEITYHALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFFGNVCALSVQKFSSNVIEKC 759
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP--- 383
++ T ++EE LLN ++ ++ D +GNY +QTA L+E +RP
Sbjct: 760 IRVAEHNTRKLLIEE-LLNRSRLEKLLRDSFGNYCVQTALDYAEPGQRMLLVEGIRPILP 818
Query: 384 --NSLHLHQRLVTKLQQ 398
+ +R+ +KLQ+
Sbjct: 819 LIRNTPYGKRIQSKLQR 835
>gi|449550572|gb|EMD41536.1| hypothetical protein CERSUDRAFT_110088 [Ceriporiopsis subvermispora
B]
Length = 1043
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 164/334 (49%), Gaps = 32/334 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL G D +F ++ + + ++ K +E ++
Sbjct: 582 IATLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTDE 641
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL-------LDLVMKALKRL 212
Q + + +QD V S++ G+ +++K++ ++ R + ++ AL
Sbjct: 642 QR-NVICESVAQD--LVNISLNMHGTRAVQKMIDFLSTRRQADPKYNAQIHSIILALSLH 698
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
+L+ G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + ID
Sbjct: 699 VVVLIKDLNGNHVIQKCLNKLAPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCIDHAS 756
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+R Q++ I+ NA +L ++ GNYVVQ++L+L D + + G+ LS+ K
Sbjct: 757 DAQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFS 816
Query: 333 SFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIE 379
S V++ C++ T ++ E LLN ++ ++ D YGNY +QTA L+E
Sbjct: 817 SNVIEKCVRVAEHSTRKMLIGE-LLNRTRLEKLLRDSYGNYCVQTALDYAEPSQRALLVE 875
Query: 380 TMRP-----NSLHLHQRLVTKLQ-QNLDSLRFGY 407
+RP + +R+ KLQ +++D+ GY
Sbjct: 876 GIRPVLPLIRNTPYGKRIQNKLQREHMDNYGGGY 909
>gi|254570018|ref|XP_002492119.1| Member of the PUF protein family [Komagataella pastoris GS115]
gi|238031916|emb|CAY69839.1| Member of the PUF protein family [Komagataella pastoris GS115]
gi|328351394|emb|CCA37793.1| Pumilio homolog 2 [Komagataella pastoris CBS 7435]
Length = 720
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 145/286 (50%), Gaps = 14/286 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ++L G +FN +++ + + ++ K ++ + D
Sbjct: 358 IYSLCKDQHGCRFLQKQLDIGGKNAATMIFNETYLSVIELMSDPFGNYLIQKLLDKVSVD 417
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q RITL + + FV+ ++D G+ +++KL++ + ++++ AL L
Sbjct: 418 Q--RITL-VKNASSKFVRIALDPHGTRALQKLVECIDTEEES-EIIIDALSSHVVSLSRD 473
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL+++ + + FI+ A +HC+ +A H GC + +D + +
Sbjct: 474 LNGNHVVQKCLQKLSSKDCQ--FIFDATCDHCVEIATHRHGCCVLQRCLDHGSKEQCYAL 531
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLE-------LEDPYLIETICFSLRGHYIDLSLTKCG 332
+S N LS + GNYVVQ+VL + D + I +++ I LSL K G
Sbjct: 532 SLEVSRNCIPLSFDPFGNYVVQYVLSQNEMIKNINDSKPVANIVAAIKDSIITLSLHKFG 591
Query: 333 SFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTAL 377
S V++ CLK ++++ L ++ +I + D YGNYV+QTAL
Sbjct: 592 SNVIEKCLKIPRVSKLVIDQLLETHATKISELLNDPYGNYVLQTAL 637
>gi|393247747|gb|EJD55254.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 1028
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 155/297 (52%), Gaps = 20/297 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL G D +F+ +++ + + ++ K +E +++
Sbjct: 586 IASLCKDQHGCRYLQKKLEEGVPEHRDIIFHETFGHFAELMTDPFGNYLCQKLVEFSSDE 645
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + + +QD V S++ G+ +++K++ ++ P + ++ AL L+
Sbjct: 646 QR-NVICESVAQD--LVTISLNMHGTRAVQKMIDFLST-PRQIHAIIVALSLHVVTLIKD 701
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ +N+ FIY A ++C+ +A H GC + ID +R Q+
Sbjct: 702 LNGNHVIQKCLNKLVPEDNQ--FIYNAVAQNCVEVATHRHGCCVLQRCIDHASDSQRVQL 759
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ NA +L ++ GNYVVQ++L+L D + + G+ LS+ K S V++ C
Sbjct: 760 VQEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFSGNVCALSVQKFSSNVIEKC 819
Query: 340 LKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRP 383
++ T +++E LL+ +++ ++ D +GNY +QTA L+E +RP
Sbjct: 820 VRVAEPHTRKLLIDE-LLHRNRLEKLLRDSFGNYCVQTALDYAEPTQRALLVEGIRP 875
>gi|294654650|ref|XP_456710.2| DEHA2A08778p [Debaryomyces hansenii CBS767]
gi|199429043|emb|CAG84666.2| DEHA2A08778p [Debaryomyces hansenii CBS767]
Length = 808
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSG------------DSRFLDK------VFNVVSEFTFQIIC 141
I L +D+ G ++LQ +L G +++ L +FN + +++
Sbjct: 480 IYSLCKDQHGCRFLQRQLDLGREAASNPNADLENTQILTNDIAATMIFNEIYLKIIELMT 539
Query: 142 NQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL 201
+ + ++ K E + DQ RI L + + F++ ++D G+ +++KL++ +
Sbjct: 540 DPFGNYLIQKLFENVSADQ--RIIL-VKNASPEFIRIALDPHGTRALQKLIECITTEEES 596
Query: 202 LDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGC 261
L++ +L L G+ VV +CL+++ +N FI++ A HC +A H GC
Sbjct: 597 R-LIINSLSPRIVALSRDLNGNHVVQKCLQRLKPE--ENQFIFETASLHCNEIATHRHGC 653
Query: 262 INMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRG 321
+ +D +RKQ+ ++ NA +LS + GNYVVQ+VL D I I ++
Sbjct: 654 CVLQRCLDHGNLAQRKQLSLKVAENATNLSLDPFGNYVVQYVLSRGDDESIRIILDHIKA 713
Query: 322 HYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ + LSL K GS V++ L+ + +++ LLN ++ + D +GNYV+QT+L
Sbjct: 714 NVVSLSLHKFGSNVIEKSLRINKLTDSLIDVLLLNKERFSEMLNDAFGNYVLQTSL 769
>gi|297796877|ref|XP_002866323.1| hypothetical protein ARALYDRAFT_919157 [Arabidopsis lyrata subsp.
lyrata]
gi|297312158|gb|EFH42582.1| hypothetical protein ARALYDRAFT_919157 [Arabidopsis lyrata subsp.
lyrata]
Length = 324
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 135/266 (50%), Gaps = 8/266 (3%)
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
F + I + L+ + +TS F+ + +++GS SI++LM + +A
Sbjct: 53 FKELISVLDTRTLMWMASSLTSDSNYFMVIARNQYGSKSIQRLMGMSDDVDVFF---FEA 109
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ RLF +M K S V ++ + +K + +Y+ L++ LYLA + GCI +N I
Sbjct: 110 IMRLFLYVMTDKYASYVAIKGMRVF--QQDKRELMYEHILQNALYLARDQHGCIALNEII 167
Query: 269 DEMKGPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
++ P R Q+L +++ NA LS + GN+VVQHVL+L D I +L GH ++LS
Sbjct: 168 TDLDDPYYRNQLLDIVANNALLLSNDAYGNFVVQHVLKLRDFRCTRNIADNLCGHCVELS 227
Query: 328 LTKCGSFVVQNCLKYRITVNYIVEEFLL--NSDQIFRVACDKYGNYVIQTALIETMRPNS 385
K GS++V+ L+ +V +V LL + + R+A +YGN+V+ AL T +
Sbjct: 228 FKKYGSYIVERLLEVGDSVMELVVMDLLACKREMLMRLARSEYGNFVVYNALDLTKDILT 287
Query: 386 LHLHQRLVTKLQQNLDSLRFGYGKHV 411
L LV KL LR G +
Sbjct: 288 ADLFYGLVRKLMPYRHLLRRSPGSKI 313
>gi|124506293|ref|XP_001351744.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23504673|emb|CAD51551.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|24849849|gb|AAM28242.1| RNA-binding protein Puf1 [Plasmodium falciparum]
Length = 1894
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 153/307 (49%), Gaps = 24/307 (7%)
Query: 83 TPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICN 142
+P+ F N I +A+D+ G + LQ L + + +++++N + +++ +
Sbjct: 820 SPISFTGN---------ICKIAKDQTGCRILQRILEKKNPKHIEEIYNEALDHIIELMVD 870
Query: 143 QYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLL 202
+ ++ K +E C +Q+ +I + S DQL + AS+ G+ +++KL++ + P +
Sbjct: 871 PFGNYLCQKLMEVCTSEQIEKIIDK--SSDQL-INASISVHGTRTVQKLIEMIK-TPSQI 926
Query: 203 DLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCI 262
KALK L+ G+ VV +CL + H + DFIY+A L +C+ ++ H GC
Sbjct: 927 KKTTKALKNSIITLIKDINGNHVVQKCLITLTSH--QCDFIYEAILNNCVEVSTHRHGCC 984
Query: 263 NMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGH 322
+ ID +++ + IS NA L ++ GNYVVQ++L L + + I L +
Sbjct: 985 VIQRCIDSANEAQKELFIRNISNNALDLVQDAFGNYVVQYILNLGNEKVNLEIANKLLPN 1044
Query: 323 YIDLSLTKCGSFVVQNCL-----KYRITVNYIVEEFLLNSDQIFR-VACDKYGNYVIQTA 376
+L++ K S VV+ CL K R I+ E L I + + D +GNYVIQ A
Sbjct: 1045 IEELAVQKFSSNVVEKCLIIGNNKCRKL---IINEILKKDKDILKQIILDPFGNYVIQRA 1101
Query: 377 LIETMRP 383
L P
Sbjct: 1102 LSVASEP 1108
>gi|452986016|gb|EME85772.1| hypothetical protein MYCFIDRAFT_150818 [Pseudocercospora fijiensis
CIRAD86]
Length = 519
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 146/280 (52%), Gaps = 9/280 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ KL + + + +F V + +++ + + ++ K +E+ N++
Sbjct: 90 IYGLCKDQHGCRFLQRKLEERNEQTVKTIFEEVKDHMIELMVDPFGNYLCQKLLESVNDE 149
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q T I + + ++++ G+ +++K+++ + P ++KAL+ LL+
Sbjct: 150 QR---TALIVNAAPAMNKIALNQHGTRALQKMIEYITT-PEQTQEIIKALRNDVVLLIQD 205
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + + FI++A +C+ + H GC + ID G ++ ++
Sbjct: 206 LNGNHVIQKCLNHLSSIDAT--FIFEAVGNNCITVGTHRHGCCVLQRCIDHADGLQKGEM 263
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ + NA SL ++ GNYVVQ++L+L +P E +C + G LS K S V++ C
Sbjct: 264 VDHVIANAYSLVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEIPALSRQKFSSNVIEKC 323
Query: 340 LKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ T IV E ++ + ++ D + NYV+QTA+
Sbjct: 324 IRCASVETRREIVRE-IMPPQTLEKLLRDGFANYVVQTAM 362
>gi|336364324|gb|EGN92684.1| hypothetical protein SERLA73DRAFT_190697 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378294|gb|EGO19452.1| hypothetical protein SERLADRAFT_478869 [Serpula lacrymans var.
lacrymans S7.9]
Length = 597
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ+KL G D +F ++ + + ++ K +E ++Q
Sbjct: 131 LCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTDEQR- 189
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL-------LDLVMKALKRLFRL 215
+ + +QD V S++ G+ +++K++ ++ R + ++ AL +
Sbjct: 190 NVICESVAQD--LVNISLNMHGTRAVQKMIDFLSTRRQTDVRYNTQIHSIIVALSLHVVV 247
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + ID +
Sbjct: 248 LIKDLNGNHVIQKCLNKLAPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQ 305
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
R Q++ I+ NA +L ++ GNYVVQ++L+L D + + G+ LS+ K S V
Sbjct: 306 RVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNV 365
Query: 336 VQNCLKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ C++ + I+ E LLN ++ ++ D YGNY +QTAL
Sbjct: 366 IEKCIRVAEHSTRKILIEELLNRTRLEKLLRDSYGNYCVQTAL 408
>gi|255950610|ref|XP_002566072.1| Pc22g21770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593089|emb|CAP99465.1| Pc22g21770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1018
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 170/334 (50%), Gaps = 19/334 (5%)
Query: 91 PFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFG 150
P +H + L +D+ G +YLQ KL + + +F+ +++ + + ++
Sbjct: 596 PLEHYKGE-LYSLCKDQHGCRYLQRKLEERNPEHVQLIFSETYMHVIELMTDPFGNYLCQ 654
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K +E N++Q R L + +L V+ ++++ G+ +++K+++ ++ V+ AL+
Sbjct: 655 KLLEYSNDEQ--RTALIDNAAPEL-VKIALNQHGTRALQKMIEFISTSK-QTQTVINALQ 710
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ +CL ++ + +FIY+A +C+ + H GC + ID
Sbjct: 711 YHVVDLVQDLNGNHVIQKCLNRLTPEDA--EFIYEAVGGNCVVVGTHRHGCCVLQRCIDH 768
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
G ++ +++ I+ ++ +L ++ GNYVVQ++L+L +P +C + G+ LS K
Sbjct: 769 ASGHQKARLISQITSHSFALVQDPFGNYVVQYILDLAEPSFTNPLCSTFAGNIPQLSKQK 828
Query: 331 CGSFVVQNCLKYRITVNY----IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
S V++ CL R NY +++EFL +++ ++ D + NYV+QTA+ L
Sbjct: 829 FSSNVIEKCL--RTADNYMKRQMIDEFLA-GNELEKMLRDSFANYVVQTAMDFC----DL 881
Query: 387 HLHQRLVTKLQQNLDSLR-FGYGKHVYNFIKDCD 419
R+V ++ L S+R +G+ + I D
Sbjct: 882 ETRNRIVEAVRPILPSIRQTPHGRRIAGKIMAAD 915
>gi|402218782|gb|EJT98857.1| ARM repeat-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 514
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 150/303 (49%), Gaps = 28/303 (9%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ+KL G D +F ++ + + ++ K +E N++Q
Sbjct: 43 LCKDQHGCRYLQKKLEEGIPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEFANDEQRN 102
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLM-------KAVANRPPLLDL--VMKALKRLF 213
I + V S++ G+ +++K++ +A + +L + ++ AL
Sbjct: 103 LICESVALD---LVGISLNMHGTRAVQKMIDYLSTPRQARVSCSSILQIHAIIIALSMNV 159
Query: 214 RLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
L+ G+ V+ +CL ++ +N+ FIY A HC+ +A H GC + ID
Sbjct: 160 VTLIKDLNGNHVIQKCLNRLAPEDNQ--FIYNAVAAHCVEVATHRHGCCVLQRCIDHASE 217
Query: 274 PRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+R Q++ I+ NA +L ++ GNYVVQ++L+L D + + G+ I LS+ K S
Sbjct: 218 AQRMQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFVGNVIPLSMQKFSS 277
Query: 334 FVVQNCLKYR--ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIET 380
V++ C++ T +VEEFL + ++ ++ D +GNY +QTA L+E
Sbjct: 278 NVIEKCIRVAEPSTRKLLVEEFLSRA-KLEKLLRDSFGNYCVQTALDYADPAQRLSLVEG 336
Query: 381 MRP 383
+RP
Sbjct: 337 IRP 339
>gi|395326054|gb|EJF58468.1| ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 978
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 167/338 (49%), Gaps = 31/338 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL G D +F ++ + + ++ K +E ++
Sbjct: 529 IPQLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYSTDE 588
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANR--PPLLDL----VMKALKRLF 213
Q + + +QD V S++ G+ +++K++ ++ R L D+ ++ AL
Sbjct: 589 QR-NVICESVAQD--LVNISLNMHGTRAVQKMIDFLSTRRQTDLGDVQIHSIILALSLHV 645
Query: 214 RLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
+L+ G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + ID
Sbjct: 646 VVLIKDLNGNHVIQKCLNKLAPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCIDHASE 703
Query: 274 PRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+R Q++ I+ NA +L ++ GNYVVQ++L+L D + + G+ LS+ K S
Sbjct: 704 HQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFAGNVCALSVQKFSS 763
Query: 334 FVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIET 380
V++ C++ T ++ E LLN ++ ++ D YGNY +QTA L+E
Sbjct: 764 NVIEKCIRVAEHSTRKMLIGE-LLNRTRLEKLLRDSYGNYCVQTALDYAEPSQRALLVEG 822
Query: 381 MRP-----NSLHLHQRLVTKLQQNLDSLRFGYGKHVYN 413
+RP + +R+ KLQ+ S FG G + +N
Sbjct: 823 IRPVLPLIRNTPYGKRIQNKLQRE-HSDAFGGGGYHHN 859
>gi|237831871|ref|XP_002365233.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
gi|211962897|gb|EEA98092.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
Length = 1618
Score = 109 bits (272), Expect = 3e-21, Method: Composition-based stats.
Identities = 87/310 (28%), Positives = 149/310 (48%), Gaps = 14/310 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I ++A+D+ G + LQ KL+ ++ + V E ++ + + ++ K +E C E
Sbjct: 1114 IEMIARDQIGCRMLQRKLSEASPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEECEEP 1173
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPP---LLDLVMKALKRLFRLL 216
QLL++ +I + V + G+ +++KL++ A P + ++ AL+ LL
Sbjct: 1174 QLLQLVRKIRPR---LVDICLSPHGTRAVQKLIEVCAGLPAGSAATNELLAALRPSVVLL 1230
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ VV + L ++ DF++ ++C+ ++ GC M ID +
Sbjct: 1231 AKDVNANHVVQKILSSF--PASRCDFVFAQVKKNCVEISTERHGCCVMQRCIDAAPPRAK 1288
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+IL I+ NA L ++ GNYVVQ VL+L+ + ++RGH +LS+ K S VV
Sbjct: 1289 SEILQEIAANALELMQDAFGNYVVQCVLDLQIEGFNGAVAGAIRGHIRELSMQKFSSNVV 1348
Query: 337 QNCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
+ CL N IV+E L D + + D Y NYVIQ AL + S Q+L+
Sbjct: 1349 EKCLVLGTPEQRNLIVDELLAEGDGLKDLLLDSYANYVIQRALTVS----SPAAQQQLLL 1404
Query: 395 KLQQNLDSLR 404
+Q L LR
Sbjct: 1405 AIQPCLSQLR 1414
>gi|401406880|ref|XP_003882889.1| hypothetical protein NCLIV_026460 [Neospora caninum Liverpool]
gi|325117305|emb|CBZ52857.1| hypothetical protein NCLIV_026460 [Neospora caninum Liverpool]
Length = 1537
Score = 109 bits (272), Expect = 3e-21, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 151/310 (48%), Gaps = 14/310 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I ++A+D+ G + LQ KL+ + ++ + V E ++ + + ++ K +E C E
Sbjct: 1093 IEMIARDQIGCRMLQRKLSDANPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEQCEEP 1152
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRP---PLLDLVMKALKRLFRLL 216
QLL++ +I + V + G+ +++KL++ A P + ++ AL+ LL
Sbjct: 1153 QLLQLVRKIRPR---LVDICLSPHGTRAVQKLIEVCAGLPINSTATNELLAALRPSIVLL 1209
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ VV + L + +F++ +HC+ ++ GC M ID +
Sbjct: 1210 AKDVNANHVVQKILSSF--PAARCEFVFAQVKKHCVEISTERHGCCVMQRCIDAAPPRAK 1267
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+IL I+ NA L ++ GNYVVQ+VL+L+ + +LRGH +LS+ K S VV
Sbjct: 1268 SEILQEIAANALELMQDAFGNYVVQYVLDLQIDGFNGAVTGALRGHIRELSMQKFSSNVV 1327
Query: 337 QNCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
+ CL + IV+E L + + + + D Y NYVIQ AL + S Q+L+
Sbjct: 1328 EKCLMLGTPEQRSLIVDELLADGEGLKDMLLDSYANYVIQRALTVS----SPAAQQQLLL 1383
Query: 395 KLQQNLDSLR 404
+Q L LR
Sbjct: 1384 VIQPCLSQLR 1393
>gi|15238618|ref|NP_200819.1| pumilio 18 [Arabidopsis thaliana]
gi|75335543|sp|Q9LVG3.1|PUM18_ARATH RecName: Full=Pumilio homolog 18; Short=APUM-18; Short=AtPUM18
gi|8777350|dbj|BAA96940.1| unnamed protein product [Arabidopsis thaliana]
gi|67633898|gb|AAY78873.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332009896|gb|AED97279.1| pumilio 18 [Arabidopsis thaliana]
Length = 327
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 138/269 (51%), Gaps = 8/269 (2%)
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
F + I ++ +L R+ +TS F+ KFGS ++KL+ + A
Sbjct: 58 FKEMISNSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSDDVDAFF---CAA 114
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ R F + K S V ++ + + +Y+ L H L LAC + GCI +N+ I
Sbjct: 115 ILRRFLHITTDKYASYVTIRAM--VVFDKVMKKALYERILYHALDLACDQHGCIALNDII 172
Query: 269 DEMKGPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
+ P R Q+L L++ NA LS + SGN+VVQHVL L D I I +L G I+LS
Sbjct: 173 TDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELS 232
Query: 328 LTKCGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
K GS++V+ L+ ++ +V E L + D++ R+A +++GN+V+ AL T + + +
Sbjct: 233 FKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKALRFT-KMSRM 291
Query: 387 HLHQRLVTKLQQNLDSLRFGYGKHVYNFI 415
L LV KL + LR +G ++ N +
Sbjct: 292 DLFWGLVQKLMPFIRLLRRSHGSNIANIL 320
>gi|407837279|gb|EKF99706.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 561
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 155/314 (49%), Gaps = 21/314 (6%)
Query: 70 NPQYETITSSNFQ---TPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKL--TSGDSRF 124
NP + + + TP G + + ++ +A+D+ G ++LQ L ++GD F
Sbjct: 176 NPHHSHVAVRGYSGNITPEGLRGSVYE---------IAKDQHGCRFLQRLLGGSNGDGEF 226
Query: 125 LDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFG 184
+ + N V +++ +QYA F+ K + +D ++ Q + ++ G
Sbjct: 227 VRIIMNEVVPHVAELMTDQYANFLIQKLFDMMPQDVRYKVACVAA---QKIISIALTPHG 283
Query: 185 SSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIY 244
+ S++K+++ +A+R + D++ +AL + L+ G+ V+ + L++ H + +FIY
Sbjct: 284 TFSVQKMVETIASREEM-DILREALSKDVVRLVKDAHGNHVIQKVLQRFSHADK--EFIY 340
Query: 245 QAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL 304
A C+ +A ++QGC + ++ +R ++ I ++ + GNYV+Q+VL
Sbjct: 341 AAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQILRCCLQIAEDPFGNYVLQYVL 400
Query: 305 ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK-YRITVNYIVEEFLLNSDQIFRV 363
E D +TI + H + L + K S V++ L+ V + E + + D + R+
Sbjct: 401 ESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKVLRGASQPVQEMYVETMCSPDVVSRL 460
Query: 364 ACDKYGNYVIQTAL 377
D +GNYV+QTAL
Sbjct: 461 IQDDFGNYVLQTAL 474
>gi|302698595|ref|XP_003038976.1| hypothetical protein SCHCODRAFT_65128 [Schizophyllum commune H4-8]
gi|300112673|gb|EFJ04074.1| hypothetical protein SCHCODRAFT_65128 [Schizophyllum commune H4-8]
Length = 480
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 160/334 (47%), Gaps = 32/334 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL G D +F ++ + + ++ K +E ++
Sbjct: 37 IPALCKDQHGCRYLQKKLEEGLPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYSTDE 96
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL--------LDLVMKALKR 211
Q I + Q V S++ G+ +++K++ ++ R + ++ AL
Sbjct: 97 QRNIICESVA---QELVNISLNMHGTRAVQKMIDFLSTRRQTDGRYNNHQIHSIILALSM 153
Query: 212 LFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEM 271
+L+ G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + ID
Sbjct: 154 HVVVLIKDLNGNHVIQKCLNKLAPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCIDHA 211
Query: 272 KGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
+R Q++ I+ NA +L ++ GNYVVQ++L+L D + + G+ LS+ K
Sbjct: 212 SDHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFAGNVCALSVQKF 271
Query: 332 GSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LI 378
S V++ C++ T +++E LLN ++ ++ D YGNY +QTA L+
Sbjct: 272 SSNVIEKCIRVAEHNTRKMLIDE-LLNRTRLEKLLRDSYGNYCVQTALDYAEPAQRALLV 330
Query: 379 ETMRP-----NSLHLHQRLVTKLQQNLDSLRFGY 407
E +RP + +R+ KLQ+ + GY
Sbjct: 331 EGIRPVLPLIRNTPYGKRIQNKLQREQNEGYGGY 364
>gi|448114573|ref|XP_004202611.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
gi|359383479|emb|CCE79395.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 158/325 (48%), Gaps = 25/325 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSG------------------DSRFLDKVFNVVSEFTFQIIC 141
IL L +D+ G ++LQ +L G + +FN + +++
Sbjct: 497 ILSLCKDQHGCRFLQRQLDMGREVSEKPTGELSKANILPNDVAASMIFNEIYLKIVELMT 556
Query: 142 NQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL 201
+ + ++ K E + DQ RI L S + F++ ++D G+ +++KL++ +
Sbjct: 557 DPFGNYLIQKLFENVSTDQ--RIILVKNSSPE-FIKIALDTHGTRALQKLVECITTEEEG 613
Query: 202 LDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGC 261
+++++L L G+ VV +CL+++ ++N FI+ A +C +A H GC
Sbjct: 614 R-IIIESLSPHIVSLSRDLNGNHVVQKCLQKLKP--SENQFIFDTASMYCNEIATHRHGC 670
Query: 262 INMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRG 321
+ +D +RKQ+ ++ NA +LS + GNYVVQ+VL D + I I ++
Sbjct: 671 CVLQRCLDHGNAEQRKQLSLEVAENATNLSLDPFGNYVVQYVLSRGDEHSISLIMDHIKN 730
Query: 322 HYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETM 381
+ I LSL K GS V++ L+ + +++ L N ++ + D +GNYV+QT+L +
Sbjct: 731 NIITLSLHKFGSNVIEKSLRIGKLTDELIKVLLENQNRFPELLNDAFGNYVLQTSL-DVA 789
Query: 382 RPNSLHLHQRLVTKLQQNLDSLRFG 406
N +HL + + L + S G
Sbjct: 790 NFNDMHLLSQALAPLLPPIKSTPHG 814
>gi|8778968|gb|AAF79883.1|AC021198_3 Contains similarity to a putative protein CAB78009 gi|7267527 from
Arabidopsis thaliana BAC T32A17 gb|AL161513. It contains
Pumilio-family RNA binding domains PF|00806 [Arabidopsis
thaliana]
Length = 671
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 153/298 (51%), Gaps = 15/298 (5%)
Query: 102 LLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
L+A+D+ G + LQ+ + G + + + ++ + + ++ K + +E+Q
Sbjct: 363 LMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKLFDVSDEEQR 422
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKP 221
I +TS + ++ ++ +G+ ++K+++ V + + LV LK F L+
Sbjct: 423 TLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIA-LVKSGLKPGFLALVKDLN 481
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G+ V+ CL+ + N N+F+ +AA ++C +A H GC + I G +R++++
Sbjct: 482 GNHVIQSCLQTL--GPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVA 539
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL- 340
IS N+ LS++ GNYVVQ++++ + + + F R HY +L+ K S V++ CL
Sbjct: 540 EISRNSLHLSQDPFGNYVVQYLIDQQVSAVKLLVQF--RMHYAELATQKFSSHVIEKCLR 597
Query: 341 KYRITVNYIVEEFLL--NSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
KY + IV E L N + + + D Y NYVIQTAL T P + +LV K+
Sbjct: 598 KYPESRAEIVRELLCVPNFEYLLQ---DPYANYVIQTALSVTKGP----VRAKLVAKV 648
>gi|15220217|ref|NP_174811.1| protein pumilio 9 [Arabidopsis thaliana]
gi|122244101|sp|Q1PFN9.1|PUM9_ARATH RecName: Full=Pumilio homolog 9; Short=APUM-9; Short=AtPUM9
gi|91805917|gb|ABE65687.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332193705|gb|AEE31826.1| protein pumilio 9 [Arabidopsis thaliana]
Length = 564
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 153/298 (51%), Gaps = 15/298 (5%)
Query: 102 LLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
L+A+D+ G + LQ+ + G + + + ++ + + ++ K + +E+Q
Sbjct: 256 LMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKLFDVSDEEQR 315
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKP 221
I +TS + ++ ++ +G+ ++K+++ V + + LV LK F L+
Sbjct: 316 TLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIA-LVKSGLKPGFLALVKDLN 374
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G+ V+ CL+ + N N+F+ +AA ++C +A H GC + I G +R++++
Sbjct: 375 GNHVIQSCLQTL--GPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVA 432
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL- 340
IS N+ LS++ GNYVVQ++++ + + + F R HY +L+ K S V++ CL
Sbjct: 433 EISRNSLHLSQDPFGNYVVQYLIDQQVSAVKLLVQF--RMHYAELATQKFSSHVIEKCLR 490
Query: 341 KYRITVNYIVEEFLL--NSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
KY + IV E L N + + + D Y NYVIQTAL T P + +LV K+
Sbjct: 491 KYPESRAEIVRELLCVPNFEYLLQ---DPYANYVIQTALSVTKGP----VRAKLVAKV 541
>gi|407406573|gb|EKF30846.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi
marinkellei]
Length = 565
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 147/295 (49%), Gaps = 9/295 (3%)
Query: 86 GFQANPFQHCANSGILLLAQDEQGSQYLQEKL--TSGDSRFLDKVFNVVSEFTFQIICNQ 143
G+ N + +A+D+ G ++LQ L ++GD F+ + N + +++ +Q
Sbjct: 186 GYSGNITPEGLRGSVYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEIVPHVAELMTDQ 245
Query: 144 YARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD 203
YA F+ K + +D ++ + + ++ G+ S++K+++ +A+R + D
Sbjct: 246 YANFLIQKLFDMMPQDVRYKVARVAAPK---IISIALTPHGTFSVQKMVETIASREEM-D 301
Query: 204 LVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCIN 263
++ +AL + L+ G+ V+ + L++ H + +FIY A C+ +A ++QGC
Sbjct: 302 ILREALSKDVVRLVKDAHGNHVIQKVLQRFSHADK--EFIYAAVGSDCISIAKNKQGCCV 359
Query: 264 MNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHY 323
+ ++ +R ++ I ++ + GNYV+Q+VLE D +TI + H
Sbjct: 360 LQRCLEYASSSQRATLVNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHL 419
Query: 324 IDLSLTKCGSFVVQNCLK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ L + K S V++ L+ V + E + + D + R+ D +GNYV+QTAL
Sbjct: 420 VQLCMNKFSSNVIEKVLRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTAL 474
>gi|367015510|ref|XP_003682254.1| hypothetical protein TDEL_0F02320 [Torulaspora delbrueckii]
gi|359749916|emb|CCE93043.1| hypothetical protein TDEL_0F02320 [Torulaspora delbrueckii]
Length = 823
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 153/300 (51%), Gaps = 13/300 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ++L S D +F T +++ + + ++ K +E +
Sbjct: 504 IHSLCKDQHGCRFLQKQLDILGSEAADSIFEETKNHTVELMTDSFGNYLIQKLLERVTVE 563
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q RITL + FV + + G+ +++KL++ + ++ ++++ +LK L
Sbjct: 564 Q--RITLAKIAAPH-FVYIASNPHGTRALQKLVECIGSKE-EANIIIGSLKGSVVELSKD 619
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ +V +CL+++ N FI+ AA EHC +A H GC + +D +R+++
Sbjct: 620 LNGNHIVQKCLQKL--QPNDVQFIFDAASEHCTEIATHRHGCCVLQRCLDHGDEVQRQRL 677
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELE----DPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ N L+ + GNYVVQ+++ E + Y I +L+ +LSL K GS V
Sbjct: 678 CDKLLSNIDHLTLDPFGNYVVQYIITKESESGNNYFTLKIVQALKSKVTELSLHKFGSNV 737
Query: 336 VQNCLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
++ L+ + ++ E L + + I + D YGNYV+QT L T + N+ +LH+ LV
Sbjct: 738 IEKILRTPAVSDDLITELLSSRAEADIQALLNDGYGNYVLQTMLDVTHQ-NNHYLHESLV 796
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 243 IYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAA--SLSRNFSGNYVV 300
+ + A H +Y+A + G + + E G + + + + S+ + LS++ +GN++V
Sbjct: 568 LAKIAAPHFVYIASNPHGTRALQKLV-ECIGSKEEANIIIGSLKGSVVELSKDLNGNHIV 626
Query: 301 QHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSD 358
Q L+ P ++ I + H +++ + G V+Q CL + + + ++ L N D
Sbjct: 627 QKCLQKLQPNDVQFIFDAASEHCTEIATHRHGCCVLQRCLDHGDEVQRQRLCDKLLSNID 686
Query: 359 QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL---RFG 406
+ D +GNYV+Q + + + + ++V L+ + L +FG
Sbjct: 687 HL---TLDPFGNYVVQYIITKESESGNNYFTLKIVQALKSKVTELSLHKFG 734
>gi|297806995|ref|XP_002871381.1| hypothetical protein ARALYDRAFT_908911 [Arabidopsis lyrata subsp.
lyrata]
gi|297317218|gb|EFH47640.1| hypothetical protein ARALYDRAFT_908911 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 41/306 (13%)
Query: 125 LDKVFNVVSEFTFQIICNQYARFV-FGKFIETCN-------EDQLLRITLQITSQDQLFV 176
++K N++S + C RF F KF++ + E L +I +T+ + F+
Sbjct: 89 VEKDHNLLSRLLDMMTCA--GRFAEFQKFLQDLDTNPTAERESHLFKIGSLLTTNKRTFL 146
Query: 177 QASVDKFGSSSIRKLMKAVANRPPLLD-LVMKALKRLFRLLMMTKPGSSVVLQCLEQIYH 235
+ +++GS S+ L + R P LD L+ A+ F LLM K +++ + +
Sbjct: 147 HLATNQYGSQSLHILFR----RSPSLDHLLFHAVGINFFLLMTDKYARGLIISAIRAV-- 200
Query: 236 HNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFS 295
K + +Y+ E+ L LA +G R I ++ NA L+ +
Sbjct: 201 DKTKKEVLYKLTYEYTLQLA----------------RGKYRDLIFECVAKNAEWLAFDPY 244
Query: 296 GNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLL 355
G +VVQ+ L L++P I LRG++ L++ + GS+VV+ CLK ++EEF
Sbjct: 245 GTHVVQNFLTLQNPVATTAIAERLRGNFFSLAMERQGSYVVEKCLKSDFARGKVLEEFRG 304
Query: 356 NSDQIFRVACDKYGNYVIQTALI----ETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHV 411
N + R+ DK+GN+V+Q AL + MRP + + V KL+ + + G+G++
Sbjct: 305 NDKEWVRMTTDKFGNFVVQCALRVMKEKEMRP----MLREFVEKLRPHFWRMEIGHGRNT 360
Query: 412 YNFIKD 417
I++
Sbjct: 361 LRLIQE 366
>gi|297852022|ref|XP_002893892.1| hypothetical protein ARALYDRAFT_891233 [Arabidopsis lyrata subsp.
lyrata]
gi|297339734|gb|EFH70151.1| hypothetical protein ARALYDRAFT_891233 [Arabidopsis lyrata subsp.
lyrata]
Length = 555
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 143/279 (51%), Gaps = 11/279 (3%)
Query: 102 LLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
L+A+D+ G + LQ+ + G +F+ + + ++ + + ++ K ++ +E+Q
Sbjct: 224 LMAKDQIGCRVLQKLVKEGTILEAKVIFHEIIDHVVELSMDPFGNYIVQKLLDVSDEEQR 283
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKP 221
I +T + ++ ++ +G+ ++K++K V + + LV LK F L+
Sbjct: 284 TMIVSVLTLTPRELIKICLNTYGTRVVQKMIKTVKTKQQIA-LVKSGLKPGFLALVNDLN 342
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
GS V+ CLE + N F+ +AA ++C +A H GC + + GP+ +++
Sbjct: 343 GSHVLQSCLE--FLGPNDTKFVLEAATKYCAEIATHRHGCRVLQCCLINTVGPQNDRLVA 400
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL- 340
I N+ LS++ GNYVVQ ++E + + + R HY +L+ K S V++ CL
Sbjct: 401 EILRNSHHLSQDPFGNYVVQCLIEQQVSAV--NLLVQFRTHYAELATQKFSSHVIEKCLR 458
Query: 341 KYRITVNYIVEEFLL--NSDQIFRVACDKYGNYVIQTAL 377
KY + IV E L N +Q+ + D YGNYVIQTAL
Sbjct: 459 KYPESRAEIVRELLSIPNFEQLLQ---DPYGNYVIQTAL 494
>gi|35186940|gb|AAQ84132.1| pumilio protein 3 [Trypanosoma cruzi]
Length = 561
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 147/295 (49%), Gaps = 9/295 (3%)
Query: 86 GFQANPFQHCANSGILLLAQDEQGSQYLQEKL--TSGDSRFLDKVFNVVSEFTFQIICNQ 143
G+ N + +A+D+ G ++LQ L ++GD F+ + N V +++ +Q
Sbjct: 186 GYSGNITPEGLRGSVYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQ 245
Query: 144 YARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD 203
YA F+ K + +D ++ + + ++ G+ S++K+++ +A+R + D
Sbjct: 246 YANFLIQKLFDMMPQDVRYKVARVAAPK---IISIALTPHGTFSVQKMVETIASREEM-D 301
Query: 204 LVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCIN 263
++ +AL + L+ G+ V+ + L++ H + +FIY A C+ +A ++QGC
Sbjct: 302 ILREALSKDVVRLVKDAHGNHVIQKVLQRFSHADK--EFIYAAVGSDCISIAKNKQGCCV 359
Query: 264 MNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHY 323
+ ++ +R ++ I ++ + GNYV+Q+VLE D +TI + H
Sbjct: 360 LQRCLEYASCSQRATLVNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHL 419
Query: 324 IDLSLTKCGSFVVQNCLK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ L + K S V++ L+ V + E + + D + R+ D +GNYV+QTAL
Sbjct: 420 VQLCMNKFSSNVIEKVLRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTAL 474
>gi|448112001|ref|XP_004201984.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
gi|359464973|emb|CCE88678.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
Length = 825
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 158/325 (48%), Gaps = 25/325 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSG------------------DSRFLDKVFNVVSEFTFQIIC 141
IL L +D+ G ++LQ +L G + +FN + +++
Sbjct: 498 ILSLCKDQHGCRFLQRQLDLGRELSENPTGELSKANILPNDVAASMIFNEIYLKIVELMT 557
Query: 142 NQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL 201
+ + ++ K E + DQ RI L S + F++ ++D G+ +++KL++ +
Sbjct: 558 DPFGNYLIQKLFENVSTDQ--RIILVKNSSPE-FIKIALDTHGTRALQKLVECITTEEEG 614
Query: 202 LDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGC 261
+++++L L G+ VV +CL+++ ++N FI+ A +C +A H GC
Sbjct: 615 R-IIIESLSPHIVSLSRDLNGNHVVQKCLQKLKP--SENQFIFDTASMYCNEIATHRHGC 671
Query: 262 INMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRG 321
+ +D +RKQ+ ++ NA +LS + GNYVVQ+VL D + I I ++
Sbjct: 672 CVLQRCLDHGNAEQRKQLSLRVAENATNLSLDPFGNYVVQYVLSRGDEHSIGLIMDHIKN 731
Query: 322 HYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETM 381
+ I LSL K GS V++ L+ + +++ L N ++ + D +GNYV+QT+L +
Sbjct: 732 NIITLSLHKFGSNVIEKSLRIGKLTDELIKVLLENQNRFPELLNDAFGNYVLQTSL-DVA 790
Query: 382 RPNSLHLHQRLVTKLQQNLDSLRFG 406
N +HL + + L + S G
Sbjct: 791 SFNDMHLLSQALAPLLPPIKSTPHG 815
>gi|118425863|gb|ABK90830.1| pumilio-family RNA binding protein [Hortaea werneckii]
Length = 457
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 145/284 (51%), Gaps = 17/284 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +L +D+ G + LQ KL D +FN V + +++ + + ++ K + N++
Sbjct: 25 IYMLCKDQHGCRSLQRKLDERDEPTTHTIFNEVKDHIIELMTDPFGNYLCQKLLGGTNDE 84
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q T I + + ++++ G+ +++K+++ ++ P +++ AL+ L+
Sbjct: 85 QR---TALIRNAMPAMTKIALNQHGTRALQKMIEFIST-PEQTSMIIDALRYDVVQLIQD 140
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ CL + + + FI+ A +C+ + H GC + ID G ++ ++
Sbjct: 141 LNGNHVIQNCLNHLSSEDAQ--FIFDAVGANCVTVGTHRHGCCVLQRCIDHASGLQKGRL 198
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ + NA SL ++ GNYVVQ++L+L +P E +C S + + + LS K S VV+ C
Sbjct: 199 VDQVIHNAFSLVQDPFGNYVVQYILDLGEPAFTEPLCKSFQKNVVFLSKQKFSSNVVEKC 258
Query: 340 LK------YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ R+ + IV L +++ R D + NYV+QTA+
Sbjct: 259 IRCAGAETKRMLIAEIVAPTEL--EKLLR---DSFANYVVQTAM 297
>gi|15238635|ref|NP_200826.1| pumilio 19 [Arabidopsis thaliana]
gi|313471418|sp|Q9LSS8.2|PUM19_ARATH RecName: Full=Putative pumilio homolog 19; Short=APUM-19;
Short=AtPUM19
gi|332009907|gb|AED97290.1| pumilio 19 [Arabidopsis thaliana]
Length = 327
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 136/269 (50%), Gaps = 8/269 (2%)
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
F + I ++ +L R+ +TS F+ KFGS ++KL+ + A
Sbjct: 58 FKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSDDVDAFF---CAA 114
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ R F + K S V ++ + + +Y+ L H L LAC + GCI +N+ I
Sbjct: 115 ILRRFLHITTDKYASYVTIRAM--VVFDKVMKKALYERILYHALDLACDQHGCIALNDII 172
Query: 269 DEMKGPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
+ P R Q+L L+ NA LS + SGN+VVQHVL L D I I +L G I+LS
Sbjct: 173 TDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELS 232
Query: 328 LTKCGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
K GS++V+ L+ ++ +V E L + D++ R+A +++GN+V+ AL T + +
Sbjct: 233 FKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKALRFT-KEMRM 291
Query: 387 HLHQRLVTKLQQNLDSLRFGYGKHVYNFI 415
L LV KL + LR +G ++ N +
Sbjct: 292 DLFWGLVQKLMPFIHLLRRSHGNNIANIL 320
>gi|389742126|gb|EIM83313.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1029
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 144/287 (50%), Gaps = 15/287 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL G D +F ++ + + ++ K +E ++
Sbjct: 573 IPSLCKDQHGCRYLQKKLEEGVPDHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYSTDE 632
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL-------LDLVMKALKRL 212
Q I + + V S++ G+ +++K++ ++ R + ++ AL
Sbjct: 633 QRNIICESVATD---LVNISLNMHGTRAVQKMIDFLSTRRQTDHRYHGQIHSIIVALSLH 689
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
+L+ G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + ID
Sbjct: 690 VVVLIKDLNGNHVIQKCLNKLAPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCIDHAS 747
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+R Q++ I+ NA +L ++ GNYVVQ++L+L D + + G+ LS+ K
Sbjct: 748 DHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFS 807
Query: 333 SFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
S V++ C++ T +++E LLN ++ ++ D YGNY +QTAL
Sbjct: 808 SNVIEKCIRVAEHGTRKMLIDE-LLNRTRLEKLLRDSYGNYCVQTAL 853
>gi|449018917|dbj|BAM82319.1| probable serine rich pumilio family rna binding domain pr otein
[Cyanidioschyzon merolae strain 10D]
Length = 910
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 153/336 (45%), Gaps = 29/336 (8%)
Query: 95 CANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE 154
C + L+A+D+QG +YLQ +L ++ +F ++ + + ++ K E
Sbjct: 561 CFAGRMALMARDQQGGRYLQARLDVKNAADTALIFEECRPHFVELAMDPFGNYLCQKLFE 620
Query: 155 TCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR 214
CN +Q L + Q SQ Q +D G+ ++K+++ P L+ +A+
Sbjct: 621 HCNREQRLELIRQSASQ---LAQVCMDPHGTRVVQKMIELTVE-PEHAALIAQAISPHCL 676
Query: 215 LLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP 274
LM G+ V+ +CL+++ + FIY AL L +A H GC + +D
Sbjct: 677 SLMCDVNGNHVIQRCLQRMDVPLRR--FIYDTALTRYLEIARHRHGCCVLQRCLDHATAE 734
Query: 275 RRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
+R + LI +A L ++ GNYVVQ+VLEL++P I +RGH LS+ K S
Sbjct: 735 QRSNLCALILNSAYELMQDPFGNYVVQYVLELKEPSYTRAIIQRIRGHLWQLSMQKFSSN 794
Query: 335 VVQN--CLKYRITVNYIVEEFL------------LNSDQ----IFRVACDKYGNYVIQTA 376
VV+ + + ++ E L + S+Q I + D Y NYV+Q A
Sbjct: 795 VVEKVFTMANERDLRSLLHELLEGPQSVESMPLQVGSEQHQRNIRPLLFDPYANYVVQRA 854
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
L P + + L +Q +L LR +GK +
Sbjct: 855 LSLAPSP----VFEALREAIQPHLAELRGTPFGKRI 886
>gi|392571884|gb|EIW65056.1| ARM repeat-containing protein [Trametes versicolor FP-101664 SS1]
Length = 992
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 150/304 (49%), Gaps = 26/304 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL G D +F ++ + + ++ K +E ++
Sbjct: 536 IPQLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTDE 595
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL-------LDLVMKALKRL 212
Q + + +QD V S++ G+ +++K++ ++ R + ++ AL
Sbjct: 596 QR-NVICESVAQD--LVNISLNMHGTRAVQKMIDFLSTRRQTDLRCNGQIHSIILALSLH 652
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
+L+ G+ V+ +CL ++ +N+ FIY A +C+ +A H GC + ID
Sbjct: 653 VVVLIKDLNGNHVIQKCLNKLAPEDNQ--FIYNAVAANCVEVATHRHGCCVLQRCIDHAS 710
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+R Q++ I+ NA +L ++ GNYVVQ++L+L D + + G+ LS+ K
Sbjct: 711 EHQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFS 770
Query: 333 SFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIE 379
S V++ C++ T ++ E LLN ++ ++ D YGNY +QTA L+E
Sbjct: 771 SNVIEKCVRVAEHNTRKMLIGE-LLNRTRLEKLLRDSYGNYCVQTALDYAEPAQRALLVE 829
Query: 380 TMRP 383
+RP
Sbjct: 830 GIRP 833
>gi|8885569|dbj|BAA97499.1| unnamed protein product [Arabidopsis thaliana]
Length = 315
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 136/269 (50%), Gaps = 8/269 (2%)
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
F + I ++ +L R+ +TS F+ KFGS ++KL+ + A
Sbjct: 46 FKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSDDVDAFF---CAA 102
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ R F + K S V ++ + + +Y+ L H L LAC + GCI +N+ I
Sbjct: 103 ILRRFLHITTDKYASYVTIRAM--VVFDKVMKKALYERILYHALDLACDQHGCIALNDII 160
Query: 269 DEMKGPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
+ P R Q+L L+ NA LS + SGN+VVQHVL L D I I +L G I+LS
Sbjct: 161 TDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELS 220
Query: 328 LTKCGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
K GS++V+ L+ ++ +V E L + D++ R+A +++GN+V+ AL T + +
Sbjct: 221 FKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKALRFT-KEMRM 279
Query: 387 HLHQRLVTKLQQNLDSLRFGYGKHVYNFI 415
L LV KL + LR +G ++ N +
Sbjct: 280 DLFWGLVQKLMPFIHLLRRSHGNNIANIL 308
>gi|449300578|gb|EMC96590.1| hypothetical protein BAUCODRAFT_24332 [Baudoinia compniacensis UAMH
10762]
Length = 1160
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 156/318 (49%), Gaps = 27/318 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ KL ++ VF + + +++ + + ++ K +E +++
Sbjct: 720 IYSLCKDQHGCRYLQRKLDERADNAVEIVFVEIKDHIIELMTDPFGNYLCQKLLECTDDE 779
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q T+ I + + ++++ G+ +++K+++ ++ P + ++++AL+ LL+
Sbjct: 780 QR---TVLIKNSASSMTKIALNQHGTRALQKMIEYIST-PQQIQIIIEALRYDVVLLIQD 835
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + N + FI+ + +C+ + H GC + ID G ++ +
Sbjct: 836 LNGNHVIQKCLNHLSPENAQ--FIFDSVGTNCIAVGTHRHGCCVLQRCIDHASGLQKGAL 893
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ + NA +L ++ GNYVVQ++L+L +P E +C S LS K S VV+ C
Sbjct: 894 VDQVINNAFALVQDPFGNYVVQYILDLGEPCFTEPLCQSFAHQVAYLSKQKFSSNVVEKC 953
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVAC---DKYGNYVIQTA-----------LIETMRP-- 383
+ R + +L + +A D + NYV+QTA L+E +RP
Sbjct: 954 I--RCATGNVRRAVILEIAEPRELAMLLRDSFANYVVQTAMDFADEETKNLLMENVRPIL 1011
Query: 384 ---NSLHLHQRLVTKLQQ 398
+R+ TKLQ+
Sbjct: 1012 PSIRHTPYGRRIATKLQE 1029
>gi|358345510|ref|XP_003636820.1| Pumilio domain-containing protein [Medicago truncatula]
gi|358348879|ref|XP_003638469.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355502755|gb|AES83958.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355504404|gb|AES85607.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 679
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 139/282 (49%), Gaps = 16/282 (5%)
Query: 103 LAQDEQGSQYLQEKLTS----GDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNE 158
LA+D GS+ LQE + + G S F ++ N + E I + V K +E CN+
Sbjct: 219 LAKDTHGSKILQEVMENLGPEGVSYFFLELINHMCELMVDPIGYE----VITKMVEVCNQ 274
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
DQ +I L +T F++ + GS S+ KL++ V R L+M AL +L
Sbjct: 275 DQKTQIVLLVTHHGAQFIRICLSLHGSRSVEKLLEKVTTREQR-GLIMSALTPGAIVLSK 333
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
G VV CL+ + H + F+ A + L L+ + GC + + +G +
Sbjct: 334 DINGHRVVFNCLKN-FPHADTEKFLGVIA-RNSLSLSRDKTGCCVLQYCVSHAQGATKNL 391
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+++ I ++A L+ + GNYV+QH++ L+ P + + L+ ++ LS K GS VV+
Sbjct: 392 LIHEIILHAPLLAEDCYGNYVIQHLISLKIPTVSGNLHHQLQQQFVSLSCNKYGSNVVEK 451
Query: 339 CL---KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
L I+ I+E LLN + R+ D YGN+VI TAL
Sbjct: 452 FLHDSGVDISSCIIIE--LLNDPNVTRLLTDPYGNFVISTAL 491
>gi|225678938|gb|EEH17222.1| RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 1070
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 172/344 (50%), Gaps = 38/344 (11%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+ +D+ G +YLQ+KL + + +F +++ + + ++ K +E N++Q
Sbjct: 614 MCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSNDEQ-- 671
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V+ ++++ G+ +++K+++ ++ P V+KAL+ L+ G
Sbjct: 672 RTALINNAAPQL-VKIALNQHGTRALQKMIEFIST-PEQTQTVIKALRGRVVELVQDLNG 729
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + + FIY A C+ + H GC + ID G +R +++
Sbjct: 730 NHVIQKCLNRLSATDAQ--FIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQ 787
Query: 283 ISVNAASLSRNFSGNYVVQHV--------------------LELEDPYLIETICFSLRGH 322
I+ NA +L ++ GNYVVQ++ ++L + + IE IC S RG+
Sbjct: 788 ITKNAFTLVQDPFGNYVVQYICKEHQPPQMIWTNFANNDDAVDLNERHFIEPICRSFRGN 847
Query: 323 YIDLSLTKCGSFVVQNCLKYRITVN----YIVEEFLLNSDQIFRVACDKYGNYVIQTALI 378
LS K S V++ C+ R N ++EE L+ S ++ ++ D + NYV+QTA+
Sbjct: 848 IPALSKQKFSSNVIEKCI--RTADNQCRAALIEEMLVPS-ELEKMLRDSFANYVVQTAM- 903
Query: 379 ETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHVYNFIKDCDLQ 421
+ P+S +L+ ++ L ++R +G+ + I + Q
Sbjct: 904 DFADPDS---RNKLIDAIRPILPAIRQTPHGRRITGKIMSAENQ 944
>gi|84996421|ref|XP_952932.1| pumilio-family RNA-binding protein [Theileria annulata strain
Ankara]
gi|65303929|emb|CAI76308.1| pumilio-family RNA-binding protein, putative [Theileria annulata]
Length = 830
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 151/313 (48%), Gaps = 15/313 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+AQD+ G + LQ +L D+ F V V + F ++ + + ++ K + C+ +QL
Sbjct: 270 IAQDQTGCRMLQRQLECNDTVFTTAVLGEVLDNLFLLMTDPFGNYLCQKLMSVCDSEQLG 329
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+I IT+ + F+ ++ G+ +I+KL++ V+ + + L L+ G
Sbjct: 330 QI---ITACEPQFIPICLNMHGTRAIQKLIEVVSGTN--VGRITAILSAGVVELINDLNG 384
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL + +++ +FIY+A EHC+ LA H GC M ID P+R +++
Sbjct: 385 NHVIQKCLVAL--SSDECEFIYKAMNEHCVGLATHRHGCCVMQRCIDAASVPQRARLVDT 442
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ L + GNYV+Q+VL L D + I L S K S VV+ CL +
Sbjct: 443 IAAKTLELVEDAYGNYVIQYVLRLRDDAVNARIVALLCEDLTRFSKHKFSSNVVERCLIF 502
Query: 343 ---RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQN 399
+ N + L + + D +GNYVIQ L +P+ L +L+ +Q +
Sbjct: 503 CPSSVRSNLVSRFLNLPFTVLHDLILDPFGNYVIQRVL-NVAQPDEL---AQLLDIIQPH 558
Query: 400 LDSLRF-GYGKHV 411
L+ L+ GK +
Sbjct: 559 LEELKLVSSGKRI 571
>gi|388579386|gb|EIM19710.1| ARM repeat-containing protein, partial [Wallemia sebi CBS 633.66]
Length = 664
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 156/309 (50%), Gaps = 34/309 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSG------------DSRFLDKVFNVVSEFTFQIICNQYARF 147
I L +D+ G +YLQ+KL SR L +FN + +++ + + +
Sbjct: 187 IYSLCKDQHGCRYLQKKLEDDDAVDEVVDGVQLTSRQL--IFNQIYTHFSELMTDPFGNY 244
Query: 148 VFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMK 207
+ K +E N+ Q R TL T +L V S++ G+ +++K++ ++ R + ++M
Sbjct: 245 LCQKMLEFANDQQ--RDTLCETVSPEL-VTISLNMHGTRAVQKMIDYLSTRRQINTIIM- 300
Query: 208 ALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNF 267
+L L+ G+ V+ +CL ++ N N FIY A +C+ +A H GC +
Sbjct: 301 SLSLNVVTLIKDLNGNHVIQKCLNRLIP--NDNQFIYNAVASNCIEVATHRHGCCVLQRC 358
Query: 268 IDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
ID +R Q++ I+ +A +L ++ GNYVVQ+VL+L D + + GH LS
Sbjct: 359 IDHASDQQRIQLVTEITYHALTLIQDPFGNYVVQYVLDLNDNRFSDGVVRQFLGHICALS 418
Query: 328 LTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT---------- 375
+ K S V++ C++ T + +++E L + ++ ++ D +GNYV+QT
Sbjct: 419 VQKFSSNVIEKCIRVADASTRSSVIDE-LNHRPRLEKLLRDAFGNYVVQTALDFAEPVQR 477
Query: 376 -ALIETMRP 383
AL+E +RP
Sbjct: 478 IALVEAIRP 486
>gi|302844187|ref|XP_002953634.1| pumilio family protein [Volvox carteri f. nagariensis]
gi|300261043|gb|EFJ45258.1| pumilio family protein [Volvox carteri f. nagariensis]
Length = 271
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 145/276 (52%), Gaps = 17/276 (6%)
Query: 144 YARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD 203
+ ++ K ++ C+E Q L + S+ V +++ G+ +++KL++ +++R
Sbjct: 5 FGNYLVQKLLDRCSEQQRLEV-----SERGELVTVALNTHGTRAVQKLIETLSSREQR-A 58
Query: 204 LVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCIN 263
+ ++AL+ L+ G+ VV +CL+++ +++ FIY AA+ C+ +A H GC
Sbjct: 59 IAIEALRPGVVSLIKDLNGNHVVQRCLQRLGPEDSQ--FIYDAAVAQCVEVATHRHGCCV 116
Query: 264 MNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHY 323
+ ID +++ ++ I+ +A LS++ GNYVVQ+VLEL + +LRG +
Sbjct: 117 LQRCIDFATPAQKQALVQEIANHALVLSQDAFGNYVVQYVLELGHLETCTQVVSALRGSF 176
Query: 324 IDLSLTKCGSFVVQNCLK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIET 380
LSL K S VV+ CLK IV E L+ + R+ D +GNYVIQ+AL T
Sbjct: 177 SSLSLQKFSSNVVERCLKLGGMDAEREAIVRE-LIAPTSLSRLLQDGFGNYVIQSALSVT 235
Query: 381 MRPNSLHLHQRLVTKLQQNLDSLRFG-YGKHVYNFI 415
S +H LV ++ L +LR +GK + I
Sbjct: 236 ----SGQIHNMLVEAIRPYLPTLRGTPHGKRIVQRI 267
>gi|392579559|gb|EIW72686.1| hypothetical protein TREMEDRAFT_72846 [Tremella mesenterica DSM
1558]
Length = 913
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 159/320 (49%), Gaps = 21/320 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+L+L +D+ G +YLQ KL GD+ D +F +++ + + ++ K +E ++
Sbjct: 448 LLMLCKDQHGCRYLQRKLEEGDAGHRDMIFLETYGHFPELMTDPFGNYLCQKLLEYSTDE 507
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMK--AVANRPPLLDLVMKALKRLFRLLM 217
Q I I S V S++ G+ +++K++ + + + ++ AL L+
Sbjct: 508 QRSAI---IDSVANDLVAISLNMHGTRAVQKMVDFLSAPRQAKQIRTLIYALSMNVVALI 564
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL ++ +N+ FIY A + + +A H GC + ID +R
Sbjct: 565 KDLNGNHVIQKCLNKLCPEDNQ--FIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRM 622
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
Q++ I N+ L ++ GNYV+Q++L+L D E + + G+ LS+ K S VV+
Sbjct: 623 QLVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVE 682
Query: 338 NCLKY---RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQR--L 392
C++ + + + E +LN ++ ++ D YGNYVIQT L + L QR L
Sbjct: 683 KCIRVADPEVRKSLVSE--VLNRSRLEKLLRDSYGNYVIQTIL------DYCELSQRMVL 734
Query: 393 VTKLQQNLDSLR-FGYGKHV 411
V ++ L S+R YGK +
Sbjct: 735 VECIRPILPSIRNTPYGKRI 754
>gi|50284731|ref|XP_444793.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524095|emb|CAG57684.1| unnamed protein product [Candida glabrata]
Length = 786
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 156/299 (52%), Gaps = 12/299 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ++L + D +F E+T +++ + + ++ K +E +D
Sbjct: 468 IYSLCKDQHGCRFLQKQLDVLGKKASDAIFEETKEYTVELMTDSFGNYLIQKLLERVTDD 527
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R+ L + ++ V+ S D G+ +++KL++ ++ + ++V+K+L+ +L
Sbjct: 528 Q--RVELAKIAAPKM-VEISKDPHGTRALQKLIECISTK-EEAEIVVKSLQPDTVILSKD 583
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+++ +++ FI+ AA C +A H GC + +D + K +
Sbjct: 584 LNGNHVIQKCLQKLNPEDSQ--FIFDAAGNECGEIATHRHGCCVLQRCLDHGTKTQFKDL 641
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELE----DPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ L+ + GNYVVQ+++ E D I L+ + +LS+ K GS V
Sbjct: 642 CEKLLKYIDMLTFDPFGNYVVQYIISKETERNDYDYTYKIVNQLKPRFTELSVHKFGSNV 701
Query: 336 VQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
V+ L+ + I+ E + S ++ + D +GNYV+QTAL + R + +++++LV
Sbjct: 702 VEKVLRTPVVSETIINELINEGSAEVQALLNDSFGNYVLQTAL-DISRDTNPYMYKKLV 759
>gi|410080980|ref|XP_003958070.1| hypothetical protein KAFR_0F03390 [Kazachstania africana CBS 2517]
gi|372464657|emb|CCF58935.1| hypothetical protein KAFR_0F03390 [Kazachstania africana CBS 2517]
Length = 807
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 142/284 (50%), Gaps = 12/284 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ++L D +F + T +++ + + ++ K IE +
Sbjct: 487 IYSLCKDQHGCRFLQKQLDVLGKYAADAIFEETKDHTIELMTDSFGNYLIQKLIERVTTE 546
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + I +I S + FV +++ G+ +++KL++ ++ +++++ALK L M
Sbjct: 547 QRIEIA-KIASPE--FVDIALNSHGTRALQKLIECISTAE-EANIIIEALKPAVVRLSMD 602
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CLE++ + + FI+ A+ C+ +A H GC + +D + +
Sbjct: 603 LNGNHVVQKCLEKLEPKDFQ--FIFDLAIGDCIDIATHRHGCCVLQRCLDHGTKEQTTSL 660
Query: 280 LYLISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ N L+ + GNYVVQ++L E +D I L+ +LSL K GS V
Sbjct: 661 CDQLLTNLDKLTLDPFGNYVVQYILTKEAEKQDYEYTYKIVNLLKPKLAELSLHKFGSNV 720
Query: 336 VQNCLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTAL 377
++ LK + I+ E + + I + D YGNYV+QTAL
Sbjct: 721 IEKLLKTNVVSESIIAELVKEDGKSDIESLLNDSYGNYVLQTAL 764
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 8/133 (6%)
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
I+ + LS + +GN+VVQ LE +P + I G ID++ + G V+Q
Sbjct: 588 IIEALKPAVVRLSMDLNGNHVVQKCLEKLEPKDFQFIFDLAIGDCIDIATHRHGCCVLQR 647
Query: 339 CLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
CL + + + ++ L N D ++ D +GNYV+Q L + ++V L
Sbjct: 648 CLDHGTKEQTTSLCDQLLTNLD---KLTLDPFGNYVVQYILTKEAEKQDYEYTYKIVNLL 704
Query: 397 QQNLDSL---RFG 406
+ L L +FG
Sbjct: 705 KPKLAELSLHKFG 717
>gi|71407210|ref|XP_806089.1| pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL
Brener]
gi|70869728|gb|EAN84238.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 370
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 150/298 (50%), Gaps = 18/298 (6%)
Query: 83 TPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKL--TSGDSRFLDKVFNVVSEFTFQII 140
TP G + + ++ +A+D+ G ++LQ L ++GD F+ + N V +++
Sbjct: 1 TPEGLRGSVYE---------IAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELM 51
Query: 141 CNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPP 200
+QYA F+ K + +D ++ + + ++ G+ S++K+++ +A+R
Sbjct: 52 TDQYANFLIQKLFDMMPQDVRYKVARVAAPK---IISIALTPHGTFSVQKMVETIASREE 108
Query: 201 LLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQG 260
+ D++ +AL + L+ G+ V+ + L++ H + +FIY A C+ +A ++QG
Sbjct: 109 M-DILREALSKDVVRLVKDAHGNHVIQKVLQRFSHADK--EFIYAAVGSDCISIAKNKQG 165
Query: 261 CINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLR 320
C + ++ +R ++ I ++ + GNYV+Q+VLE D +TI +
Sbjct: 166 CCVLQRCLEYASCSQRATLVNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFL 225
Query: 321 GHYIDLSLTKCGSFVVQNCLK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
H + L + K S V++ L+ V + E + + D + R+ D +GNYV+QTAL
Sbjct: 226 PHLVQLCMNKFSSNVIEKVLRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTAL 283
>gi|221486916|gb|EEE25162.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 685
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 148/307 (48%), Gaps = 13/307 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I ++A+D+ G + LQ KL+ ++ + V E ++ + + ++ K +E C E
Sbjct: 186 IEMIARDQIGCRMLQRKLSEASPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEECEEP 245
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
QLL++ +I + V + G+ +++KL++ + + ++ AL+ LL
Sbjct: 246 QLLQLVRKIRPR---LVDICLSPHGTRAVQKLIEPAGS--AATNELLAALRPSVVLLAKD 300
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ VV + L ++ DF++ ++C+ ++ GC M ID + +I
Sbjct: 301 VNANHVVQKILSSFPA--SRCDFVFAQVKKNCVEISTERHGCCVMQRCIDAAPPRAKSEI 358
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I+ NA L ++ GNYVVQ VL+L+ + ++RGH +LS+ K S VV+ C
Sbjct: 359 LQEIAANALELMQDAFGNYVVQCVLDLQIEGFNGAVAGAIRGHIRELSMQKFSSNVVEKC 418
Query: 340 LKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
L N IV+E L D + + D Y NYVIQ AL + S Q+L+ +Q
Sbjct: 419 LVLGTPEQRNLIVDELLAEGDGLKDLLLDSYANYVIQRALTVS----SPAAQQQLLLAIQ 474
Query: 398 QNLDSLR 404
L LR
Sbjct: 475 PCLSQLR 481
>gi|50552736|ref|XP_503778.1| YALI0E10395p [Yarrowia lipolytica]
gi|49649647|emb|CAG79369.1| YALI0E10395p [Yarrowia lipolytica CLIB122]
Length = 566
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 97 NSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETC 156
N I L +D+ G +YLQ KL + +L+ +F +++ + + ++ K +E C
Sbjct: 257 NCDIFALCKDQHGCRYLQRKLEE-EPYYLNLIFEQTHSHVVELMTDPFGNYLCQKLLENC 315
Query: 157 NEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
+ Q T+ I + VQ ++++ G+ +++K++ V N ++++++AL+R L
Sbjct: 316 SVAQ---TTVLIRTAAPSLVQVALNQHGTRALQKMIDYVTNDE-QIEIIVQALERNVVRL 371
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +CL ++ ++ +FIY+A ++ + +A H GC + +D +R
Sbjct: 372 IQDLNGNHVIQKCLNRL--NSCDTNFIYRAVSQNLVVVATHRHGCCVLQRCVDYADVLQR 429
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ ++ +I+ +A L + GNYV Q+VL E + GH + LS+ K S V+
Sbjct: 430 EMLIGVITKHALQLVCDPFGNYVTQYVLG-------EQVIRQFVGHVVALSMQKFSSNVI 482
Query: 337 QNCLK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ LK Y + I E + S + ++ D YGNYV+QTAL
Sbjct: 483 EKSLKVASYELRAVLIAE--ICASPLLPKLLSDCYGNYVVQTAL 524
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 83/194 (42%), Gaps = 8/194 (4%)
Query: 189 RKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAAL 248
R L + + P L+L+ + LM G+ + + LE + + + A
Sbjct: 271 RYLQRKLEEEPYYLNLIFEQTHSHVVELMTDPFGNYLCQKLLENC--SVAQTTVLIRTAA 328
Query: 249 EHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGNYVVQHVLELE 307
+ +A ++ G + ID + + +I+ + N L ++ +GN+V+Q L
Sbjct: 329 PSLVQVALNQHGTRALQKMIDYVTNDEQIEIIVQALERNVVRLIQDLNGNHVIQKCLNRL 388
Query: 308 DPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLN--SDQIFRVAC 365
+ I ++ + + ++ + G V+Q C+ Y + + E L+ + ++ C
Sbjct: 389 NSCDTNFIYRAVSQNLVVVATHRHGCCVLQRCVDY---ADVLQREMLIGVITKHALQLVC 445
Query: 366 DKYGNYVIQTALIE 379
D +GNYV Q L E
Sbjct: 446 DPFGNYVTQYVLGE 459
>gi|15236527|ref|NP_192596.1| pumilio 15 [Arabidopsis thaliana]
gi|75100238|sp|O81465.1|PUM15_ARATH RecName: Full=Pumilio homolog 15; Short=APUM-15; Short=AtPUM15
gi|3377818|gb|AAC28191.1| contains similarity to drosophila pumilio protein (GB:S22026)
[Arabidopsis thaliana]
gi|7267498|emb|CAB77981.1| putative self-incompatability RNA-binding protein [Arabidopsis
thaliana]
gi|332657258|gb|AEE82658.1| pumilio 15 [Arabidopsis thaliana]
Length = 477
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 155/339 (45%), Gaps = 27/339 (7%)
Query: 57 SGRSTVPNLSGTSNPQYETITSSNFQ--TPLGFQANPFQHCANSGILLLAQDEQGSQYLQ 114
SG TV G S S N + L A + + + +L A+D S LQ
Sbjct: 110 SGGRTVSGSRGISRSTDFVGASQNLRPFVSLDDDAYGYMYGIRNTLLSRAKDGIESHMLQ 169
Query: 115 EKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQL 174
+ G +DK+F+ + +++ + Y VF K +E C ++Q+ R+ + +
Sbjct: 170 YVIAKGLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVLEEPFE 229
Query: 175 FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIY 234
FV+ V G+ +I+ LM+++ + + M+ L + LL V+L C Q
Sbjct: 230 FVRLCVHTHGTHAIQGLMRSLCSEEQ-ISRFMETLCYVSLLLTKDVIAHRVILFCFNQFS 288
Query: 235 HHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI----DEMKGPRRKQILYLISVNAASL 290
+ + ++ + +++C +A + GC + I E++ P K+I+ + A L
Sbjct: 289 PSHTR--YLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPLIKEIISI----AVRL 342
Query: 291 SRNFSG----------NYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
N G NYVVQ++L L+D + + L G+Y+ LS K GS VVQ CL
Sbjct: 343 CGNCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCL 402
Query: 341 KYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALI 378
+ R + I+ E L + D + D YG+YVIQTA I
Sbjct: 403 ESREFSSRRIIAELLSDIDSLL---VDPYGDYVIQTAWI 438
>gi|313231125|emb|CBY19123.1| unnamed protein product [Oikopleura dioica]
Length = 725
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 156/315 (49%), Gaps = 20/315 (6%)
Query: 104 AQDEQGSQYLQEKL---TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
+QD+ GS+++Q+KL T GD VFN + ++ +I + + +V KF+E + +Q
Sbjct: 404 SQDQHGSRFIQQKLERCTPGDREL---VFNEILSSSYNLIIDVFGNYVIQKFLEFGSVEQ 460
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
+++ I +Q S+ +G I+K ++A ++ P ++K L+ + +
Sbjct: 461 RVQLLNSIKGH---VLQLSLQMYGCRVIQKGLEAFSHLPEHQIDIVKELEGHVLKCVKDQ 517
Query: 221 PGSSVVLQCLEQI-YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV + +E + H N FI A L+ H GC + ++ + QI
Sbjct: 518 NGNHVVQKVIECVPSEHLN---FIVDAFAGQVYQLSTHPYGCRVIQRILEHCNTDQTAQI 574
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I L+ + GNYVVQH+LE I +RG + L+ K S V++ C
Sbjct: 575 LDEIHPQTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASNVIEKC 634
Query: 340 L--KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ R T +++E +S+ +F + D+Y NYV+Q L P ++LV++++
Sbjct: 635 VTSSSRTTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADMPQK----RKLVSQMK 690
Query: 398 QNLDSL-RFGYGKHV 411
++++L R+ YGKH+
Sbjct: 691 PHINNLKRYTYGKHI 705
>gi|159471610|ref|XP_001693949.1| puf protein [Chlamydomonas reinhardtii]
gi|158277116|gb|EDP02885.1| puf protein [Chlamydomonas reinhardtii]
Length = 273
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 146/277 (52%), Gaps = 17/277 (6%)
Query: 144 YARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD 203
+ ++ K ++ C+E Q L ++ + V +++ G+ +++KL++ +++R
Sbjct: 5 FGNYLVQKLLDRCSEQQRLEVSGDRRGE---LVSVALNTHGTRAVQKLIETLSSREQR-A 60
Query: 204 LVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCIN 263
+ ++AL+ L+ G+ VV +CL+++ +++ FIY AA+ C+ +A H GC
Sbjct: 61 IAIEALRPGVVSLIKDLNGNHVVQRCLQRLGPEDSQ--FIYDAAVACCVEVATHRHGCCV 118
Query: 264 MNNFIDEMKGPRRKQILYL-ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGH 322
+ ID P +KQ L + ++ +A LS++ GNYVVQ+VLEL + +LRG
Sbjct: 119 LQRCID-FATPGQKQALVMEVARHALVLSQDAFGNYVVQYVLELGHLDSCAAVVVALRGS 177
Query: 323 YIDLSLTKCGSFVVQNCLKYR---ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIE 379
+ LSL K S VV+ CLK IV E L+ + + R+ D YGNYVIQ+AL
Sbjct: 178 FCSLSLQKFSSNVVERCLKLGGLDAERELIVRE-LIQPNNLSRLLQDGYGNYVIQSALSV 236
Query: 380 TMRPNSLHLHQRLVTKLQQNLDSLRFG-YGKHVYNFI 415
T S H LV ++ L +LR +GK + I
Sbjct: 237 T----SGTTHGLLVEAIKPYLPTLRGTPHGKRIVQRI 269
>gi|156844826|ref|XP_001645474.1| hypothetical protein Kpol_1061p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156116137|gb|EDO17616.1| hypothetical protein Kpol_1061p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 739
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 142/291 (48%), Gaps = 26/291 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ++L + +FN E T +++ + + ++ K +E +
Sbjct: 420 IYSLCKDQHGCRFLQKQLDVMGENAANAIFNETKEHTVELMTDSFGNYLIQKLLERVTVE 479
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L I QI++ FV +++ G+ +++KL++ V LV+ +L+ L
Sbjct: 480 QRLEIA-QISAP--YFVDIALNPHGTRALQKLVECVGTEE-EAQLVVDSLQPSIVELSKD 535
Query: 220 KPGSSVVLQCLEQI---YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
G+ VV +CL+++ Y FI+ AA + C+ +A GC + +D +R
Sbjct: 536 LNGNHVVQKCLQKLDPTYFQ-----FIFDAASQDCVDIATQRHGCCVLQRCLDHGNKDQR 590
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFS--------LRGHYIDLSL 328
+ + ++ N LS + GNYVVQ+V+ E E F L+ DLSL
Sbjct: 591 RGLCEMLLSNIDQLSIDPFGNYVVQYVITKES----EEKAFDYSYKIVEVLKPKVKDLSL 646
Query: 329 TKCGSFVVQNCLKYRITVNYIVEEFLLNSD--QIFRVACDKYGNYVIQTAL 377
K GS VV+ LK ++ E L N+D +I + D YGNYV+QTAL
Sbjct: 647 HKFGSNVVEKILKTPALSEPLILELLKNNDESEIQMLLNDSYGNYVLQTAL 697
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 290 LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVN 347
LS++ +GN+VVQ L+ DP + I + +D++ + G V+Q CL + +
Sbjct: 532 LSKDLNGNHVVQKCLQKLDPTYFQFIFDAASQDCVDIATQRHGCCVLQRCLDHGNKDQRR 591
Query: 348 YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL---R 404
+ E L N DQ+ + D +GNYV+Q + + + ++V L+ + L +
Sbjct: 592 GLCEMLLSNIDQL---SIDPFGNYVVQYVITKESEEKAFDYSYKIVEVLKPKVKDLSLHK 648
Query: 405 FG 406
FG
Sbjct: 649 FG 650
>gi|156095470|ref|XP_001613770.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148802644|gb|EDL44043.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 1542
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 157/333 (47%), Gaps = 30/333 (9%)
Query: 57 SGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEK 116
+GR T P +Y ++ +P+ F N I +A+D+ G + LQ
Sbjct: 614 AGRRTHPQK------KYGYPNRDSYLSPIEFSGN---------IFNIAKDQTGCRILQRI 658
Query: 117 LTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFV 176
L + R + +++ + +++ + + ++ K +E C +Q+ RI + DQL V
Sbjct: 659 LERKNPRHVQEIYREALDNIVELMVDPFGNYLCQKLMEVCTSEQIERII--DAAADQL-V 715
Query: 177 QASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHH 236
ASV G+ +++KL++ + P + +AL+ L+ G+ VV +CL + H
Sbjct: 716 SASVSVHGTRTVQKLIEMIRT-PAQIAKATRALQNSVITLIKDINGNHVVQKCLVSLTSH 774
Query: 237 NNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSG 296
+ +FIY+A L +C+ ++ H GC + ID ++ + I+ + L ++ G
Sbjct: 775 --QCEFIYKAILNNCVEVSTHRHGCCVIQRCIDSANEQQKALFIRHITDHTLELVQDAFG 832
Query: 297 NYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK------YRITVNYIV 350
NYVVQ+VL L + I L + +L+ K S VV+ CL +I +N I+
Sbjct: 833 NYVVQYVLNLGREKVNLDIVHRLLPNLEELATQKFASNVVEKCLTIGSSRCRKILINDIL 892
Query: 351 EEFLLNSDQIFRVACDKYGNYVIQTALIETMRP 383
D + ++ D++GNYVIQ AL P
Sbjct: 893 RR---GKDSMKKLILDRFGNYVIQRALSVASEP 922
>gi|401889099|gb|EJT53039.1| hypothetical protein A1Q1_00046 [Trichosporon asahii var. asahii
CBS 2479]
Length = 943
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 154/318 (48%), Gaps = 28/318 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
IL L +D+ G +YLQ+KL GD D +F +++ + + ++ K +E E+
Sbjct: 434 ILSLCKDQHGCRYLQKKLEEGDPAHRDMIFRETYGHFPELMIDPFGNYLCQKLLEHATEE 493
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALKRLFRLLM 217
Q I I S V S++ G+ +++K++ +A +P + ++ AL L+
Sbjct: 494 QRSAI---IDSVSNDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLIYALSVNVVALI 550
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL ++ +N+ FIY A + + +A H GC + ID +R
Sbjct: 551 KDLNGNHVIQKCLNKLIPEDNQ--FIYNAIATNLIEVATHRHGCCVLQRSIDHASPAQRL 608
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
Q++ I N+ L ++ GNYV+Q++L+L D E + + G+ L S VV+
Sbjct: 609 QLVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSL----FSSNVVE 664
Query: 338 NCLKYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT-----------ALIETMRP-- 383
C++ + ++ +LN ++ ++ D YGNYVIQT L+E +RP
Sbjct: 665 KCIRVADPEIRKVLVAEVLNRSRLEKLLRDSYGNYVIQTILDYCEIGQRMVLVECIRPIL 724
Query: 384 ---NSLHLHQRLVTKLQQ 398
+ +R+ +KLQ+
Sbjct: 725 PSIRNTPYGKRIQSKLQR 742
>gi|406699075|gb|EKD02294.1| RNA-binding protein of the pumilio family [Trichosporon asahii var.
asahii CBS 8904]
Length = 943
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 154/318 (48%), Gaps = 28/318 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
IL L +D+ G +YLQ+KL GD D +F +++ + + ++ K +E E+
Sbjct: 434 ILSLCKDQHGCRYLQKKLEEGDPAHRDMIFRETYGHFPELMIDPFGNYLCQKLLEHATEE 493
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALKRLFRLLM 217
Q I I S V S++ G+ +++K++ +A +P + ++ AL L+
Sbjct: 494 QRSAI---IDSVSNDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLIYALSVNVVALI 550
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ +CL ++ +N+ FIY A + + +A H GC + ID +R
Sbjct: 551 KDLNGNHVIQKCLNKLIPEDNQ--FIYNAIATNLIEVATHRHGCCVLQRSIDHASPAQRL 608
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
Q++ I N+ L ++ GNYV+Q++L+L D E + + G+ L S VV+
Sbjct: 609 QLVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSL----FSSNVVE 664
Query: 338 NCLKYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT-----------ALIETMRP-- 383
C++ + ++ +LN ++ ++ D YGNYVIQT L+E +RP
Sbjct: 665 KCIRVADPEIRKVLVAEVLNRSRLEKLLRDSYGNYVIQTILDYCEIGQRMVLVECIRPIL 724
Query: 384 ---NSLHLHQRLVTKLQQ 398
+ +R+ +KLQ+
Sbjct: 725 PSIRNTPYGKRIQSKLQR 742
>gi|403414617|emb|CCM01317.1| predicted protein [Fibroporia radiculosa]
Length = 1053
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 151/321 (47%), Gaps = 43/321 (13%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL G D +F ++ + + ++ K +E +D
Sbjct: 591 IPSLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTDD 650
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMK----------------AVANRPPLLD 203
Q + + +QD V S++ G+ +++K++ +A R D
Sbjct: 651 QR-NVICESVAQD--LVNISLNMHGTRAVQKMIDFLSTRRQASLVPARFHYIAYRDGQTD 707
Query: 204 L--------VMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLA 255
L ++ AL +L+ G+ V+ +CL ++ +N+ FIY A +C+ +A
Sbjct: 708 LKYNAQIHSIILALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQ--FIYNAVAANCVEVA 765
Query: 256 CHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETI 315
H GC + +D +R Q++ I+ NA +L ++ GNYVVQ++L+L D + +
Sbjct: 766 THRHGCCVLQRCVDHASDIQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAV 825
Query: 316 CFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVI 373
G+ LS+ K S V++ C++ T ++ E LLN ++ ++ D YGNY +
Sbjct: 826 IRQFTGNVCALSVQKFSSNVIEKCVRVAEHSTRKMLIGE-LLNRTRLEKLLRDSYGNYCV 884
Query: 374 QTA-----------LIETMRP 383
QTA L+E +RP
Sbjct: 885 QTALDYAEPSQRALLVEGIRP 905
>gi|313245253|emb|CBY40040.1| unnamed protein product [Oikopleura dioica]
Length = 525
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 156/315 (49%), Gaps = 20/315 (6%)
Query: 104 AQDEQGSQYLQEKL---TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
+QD+ GS+++Q+KL T GD VFN + ++ +I + + +V KF+E + +Q
Sbjct: 204 SQDQHGSRFIQQKLERCTPGDREL---VFNEILSSSYNLIIDVFGNYVIQKFLEFGSVEQ 260
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
+++ I +Q S+ +G I+K ++A ++ P ++K L+ + +
Sbjct: 261 RVQLLNSIKGH---VLQLSLQMYGCRVIQKGLEAFSHLPEHQIDIVKELEGHVLKCVKDQ 317
Query: 221 PGSSVVLQCLEQI-YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV + +E + H N FI A L+ H GC + ++ + QI
Sbjct: 318 NGNHVVQKVIECVPSEHLN---FIVDAFAGQVYQLSTHPYGCRVIQRILEHCNTDQTAQI 374
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I L+ + GNYVVQH+LE I +RG + L+ K S V++ C
Sbjct: 375 LDEIHPQTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASNVIEKC 434
Query: 340 L--KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ R T +++E +S+ +F + D+Y NYV+Q L P ++LV++++
Sbjct: 435 VTSSSRTTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADMPQK----RKLVSQMK 490
Query: 398 QNLDSL-RFGYGKHV 411
++++L R+ YGKH+
Sbjct: 491 PHINNLKRYTYGKHI 505
>gi|218192238|gb|EEC74665.1| hypothetical protein OsI_10341 [Oryza sativa Indica Group]
Length = 671
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 148/311 (47%), Gaps = 48/311 (15%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I +A+D+ G ++LQ+K G + D +F + + +++ N +A ++ K ++
Sbjct: 392 AKGYIYFMAKDQNGCRFLQQKFEEGKDQ-ADLIFEGIIDHIPELMANSFANYLVQKLLDV 450
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
C+E+Q LRI +T ++ S++ G+ SI+KL++ V R ++ L++ AL+ F
Sbjct: 451 CDEEQRLRIIAILTEDPVKLLRVSLNSHGTRSIQKLIETVKTRKQIM-LIISALQPGFIH 509
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ V+ +CL+ NK IY H
Sbjct: 510 LVNDPNGNHVIQKCLKNFDAEENK--IIYDGTDTH------------------------- 542
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
Y S+N + NYV+Q+VL+L+ P+ + +G+Y+ LS K GS V
Sbjct: 543 -----YKNSLNVLT-------NYVIQYVLDLKIPFANAQLASLFQGNYVYLSKQKVGSNV 590
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
V+ CLK + I+ E L+++ ++ D Y NYVI TAL +T HL LV
Sbjct: 591 VEKCLKVFPDDDKAAIIWE-LISASHFEQLLQDPYANYVIHTALAQTRG----HLRSALV 645
Query: 394 TKLQQNLDSLR 404
+ + +++R
Sbjct: 646 NAILPHEEAIR 656
>gi|71028510|ref|XP_763898.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350852|gb|EAN31615.1| RNA-binding protein, putative [Theileria parva]
Length = 915
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 147/316 (46%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ +AQD+ G + LQ +L D+ F V V + F ++ + + ++ K + C+
Sbjct: 293 VAAIAQDQTGCRMLQRQLECSDTAFTSAVLREVLDNLFLLMTDPFGNYLCQKLMSVCDAG 352
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
QL I IT + F+ ++ G+ +I+KL++ V+ ++ + L L+
Sbjct: 353 QLGDI---ITGCETQFIPICLNMHGTRAIQKLIEVVSGNN--VNRITAILSAGVVELIND 407
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL + ++ +FIY+A EHC+ LA H GC M ID +R ++
Sbjct: 408 LNGNHVIQKCLVAL--SSDDCEFIYRAMNEHCVGLATHRHGCCVMQRCIDAASPTQRAKL 465
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I+ L + GNYV+Q+VL L D + I L S K S VV+ C
Sbjct: 466 VDTIAAKTLELVEDAYGNYVIQYVLRLRDDAVNARIVSLLCEDLTKFSKHKFSSNVVERC 525
Query: 340 LKY---RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
L + + N + L + + D +GNYVIQ L +P+ L L+ +
Sbjct: 526 LIFCPSSVRSNLVSRFLNLPFSVLHDLILDPFGNYVIQRVL-NVAQPDEL---AHLLDII 581
Query: 397 QQNLDSLRF-GYGKHV 411
Q +L+ L+ GK +
Sbjct: 582 QPHLEELKLVSSGKRI 597
>gi|448516169|ref|XP_003867508.1| hypothetical protein CORT_0B03630 [Candida orthopsilosis Co 90-125]
gi|380351847|emb|CCG22071.1| hypothetical protein CORT_0B03630 [Candida orthopsilosis]
Length = 822
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 154/340 (45%), Gaps = 45/340 (13%)
Query: 78 SSNFQTPLGFQANPFQHCA----NSGILLLAQDEQGSQYLQ-------EKLTSGDSRFLD 126
N++ G AN +Q+ IL L D+ G ++LQ E + G+ D
Sbjct: 452 GGNYRHRKGEDANKYQNAKIEDYKGHILDLCGDQHGCRFLQRELIKEQEGIAKGEGNKAD 511
Query: 127 K--------------VFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQD 172
+ VFN + + ++ + + ++ K +E ++Q L + + SQ
Sbjct: 512 ELDNKEKVDESLATMVFNELDDDIVNLMLDSFGNYLIQKLVECITDEQRLELIKKSRSQ- 570
Query: 173 QLFVQASVDKFGSSSIRKLMKAVANRPPLLD------------LVMKALKRLFRLLMMTK 220
F + ++D G+ +++KL++ V D L++++L L
Sbjct: 571 --FNRIALDSHGTRALQKLIECVGKTKDEADVKGDELQDESARLIIESLAPTIVSLSKDL 628
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ VV +CL I N N IY ++C +ACH GC + +D + +
Sbjct: 629 NGNHVVQKCL--ISLSNETNQVIYDTIKDNCEVVACHRHGCCVLQRCLDYGNNQQIDALS 686
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
+ I+ + + GNYVVQ+VL D I+TI L+ ++ LS+ K GS V++ L
Sbjct: 687 HEITTKLDIFTADPYGNYVVQYVLTHGDRQSIDTIFAYLQSNFYQLSIHKFGSNVLEKSL 746
Query: 341 KYRIT--VNYIVEEFL-LNSDQIFRVACDKYGNYVIQTAL 377
+ T + +++E L L+SDQ +V D YGNYV+QT L
Sbjct: 747 RLNNTKQSSILIDELLKLSSDQFLKVLNDSYGNYVLQTCL 786
>gi|365760688|gb|EHN02392.1| Puf4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 891
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 153/302 (50%), Gaps = 25/302 (8%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F E+T +++ + + ++ K +E +Q
Sbjct: 574 LCKDQHGCRFLQKQLDVLGSKAADAIFEETKEYTVELMTDSFGNYLIQKLLEAVTTEQ-- 631
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 632 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTY-EEAQIVVDSLRPYTVQLSKDLNG 689
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK----- 277
+ V+ +CL+++ N + FI+ A ++C+ +A H GC + +D G R +
Sbjct: 690 NHVIQKCLQRLKPENFQ--FIFDAICDNCIDIATHRHGCCVLQRCLDH--GTREQCETLC 745
Query: 278 -QILYLISVNAASLSRNFSGNYVVQHVLELEDPY----LIETICFSLRGHYIDLSLTKCG 332
++L L+ L+ + GNYVVQ+++ E I L+ I+LS+ K G
Sbjct: 746 NKLLTLVD----KLTLDPFGNYVVQYIITKESERKKYDYTHKIVHLLKPRAIELSIHKFG 801
Query: 333 SFVVQNCLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
S V++ LK I ++ E L N + I + D YGNYV+QTAL + + N +L++
Sbjct: 802 SNVIEKILKTPIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYK 860
Query: 391 RL 392
RL
Sbjct: 861 RL 862
>gi|297797465|ref|XP_002866617.1| hypothetical protein ARALYDRAFT_919767 [Arabidopsis lyrata subsp.
lyrata]
gi|297312452|gb|EFH42876.1| hypothetical protein ARALYDRAFT_919767 [Arabidopsis lyrata subsp.
lyrata]
Length = 415
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 11/243 (4%)
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
F I N +L + ++TS+ FV+ DK GS +R+L +L + A
Sbjct: 99 FNDMILRNNGRELHGVVSKLTSESDYFVEIVSDKEGSRRVRRLFGKFHQTDEIL---LNA 155
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ R F +M K V + + +++ + L LY A E GCI +N I
Sbjct: 156 IVRRFIDIMTGKYSYLVAITAFKV-----SESFELVSLTLRDALYFASDEIGCIALNQII 210
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
E R + + IS NA LS + SGN+VVQHVL D + F L G+Y++LS
Sbjct: 211 TESNNIFRYEFFHEISENADWLSMDDSGNFVVQHVLNFHDLECTNRVAFRLCGYYVELSF 270
Query: 329 TKCGSFVVQNCLK--YRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNS 385
+ GS++V+ L+ I ++ +V E + ++R+A D +GNYV+Q AL T R
Sbjct: 271 ERRGSYIVEQILESGSMIALDLVVSELMECGGFTLWRLAQDAFGNYVVQKALRVTRRQGR 330
Query: 386 LHL 388
+ L
Sbjct: 331 VDL 333
>gi|354543476|emb|CCE40195.1| hypothetical protein CPAR2_102330 [Candida parapsilosis]
Length = 860
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 154/343 (44%), Gaps = 56/343 (16%)
Query: 86 GFQANPFQHCA----NSGILLLAQDEQGSQYLQEKL-----------------TSGDSRF 124
G AN +Q+ IL L D+ G ++LQ +L + GD
Sbjct: 487 GEDANKYQNAKIQDYRGHILDLCSDQHGCRFLQRELAKEQDCLLKRDDNKSDGSKGDGEI 546
Query: 125 LDK-----VFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQAS 179
D+ +FN + + ++ + + ++ K +E + +Q L + +SQ F + +
Sbjct: 547 KDESVSTMIFNELHDEVVNLMLDPFGNYLIQKLVECVSNEQRLELIKYSSSQ---FNRIA 603
Query: 180 VDKFGSSSIRKLMKAVA----NRPPLLD------LVMKALKRLFRLLMMTKPGSSVVLQC 229
+D G+ +++KL++ V N+ ++D L++K+L+ LL G+ VV +C
Sbjct: 604 LDSHGTRALQKLIECVGASHDNQEEVVDENDSASLIIKSLEPSIVLLSRDLNGNHVVQKC 663
Query: 230 LEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAAS 289
L I N N IY +C +ACH GC + +D + + + + ++
Sbjct: 664 L--INLSNKVNQVIYDTITSNCEVVACHRHGCCVIQRCLDYGNDRQVETLSHEVTTKLGV 721
Query: 290 LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR------ 343
+ + GNYVVQ+VL D I+TI LR H+ LS+ K GS V++ L+
Sbjct: 722 FTTDPYGNYVVQYVLSHGDSQSIDTIFAYLRDHFYQLSIHKFGSNVLEKSLRLEQKGKKE 781
Query: 344 ---------ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ + I E L+SDQ V D +GNYV+QT L
Sbjct: 782 NEEENNSSTRSASLIDELLKLSSDQFSTVLNDSFGNYVLQTCL 824
>gi|240276968|gb|EER40478.1| RNA-binding protein [Ajellomyces capsulatus H143]
Length = 847
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 169/371 (45%), Gaps = 79/371 (21%)
Query: 28 DPSYSSFNEIHPSP--PVPLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPL 85
+P Y ++ I+P+P P +P+S P RS G S+ Q+ ++ +T
Sbjct: 402 NPPYGAY--INPAPFSPYSRFPESPARNPGQGRRSG----EGESS-QFSRFGNAPLET-- 452
Query: 86 GFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYA 145
+Q + C +D+ G +YLQ+KL + +F +++ + +
Sbjct: 453 -YQGELYGMC---------KDQYGCRYLQKKLEEQSPAHVQMIFLETHIHVVELMTDPFG 502
Query: 146 RFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLV 205
++ K +E N++Q R L + QL V+ ++++ G+ +++K+++ ++
Sbjct: 503 NYLCQKLLEFSNDEQ--RTALINNAAPQL-VKIALNQHGTRALQKMIEFIST-------- 551
Query: 206 MKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMN 265
FIY A E C+ + H GC +
Sbjct: 552 ---------------------------------PEQFIYDAVGESCVPVGTHRHGCCVLQ 578
Query: 266 NFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYID 325
ID G +R +++ I+ NA +L ++ GNYVVQ++L+L +P+ IE IC S RG+
Sbjct: 579 RCIDHASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPA 638
Query: 326 LSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA------- 376
LS K S V++ C++ + + +V+E L+ S ++ ++ D + NYV+QTA
Sbjct: 639 LSKQKFSSNVIEKCIRTADPQSRSALVDEMLVPS-ELEKMLRDSFANYVVQTAMDFADPE 697
Query: 377 ----LIETMRP 383
L+E +RP
Sbjct: 698 YRTKLVEAIRP 708
>gi|15220219|ref|NP_174813.1| protein pumilio 10 [Arabidopsis thaliana]
gi|313471421|sp|Q9LP21.2|PUM10_ARATH RecName: Full=Putative pumilio homolog 10; Short=APUM-10;
Short=AtPUM10
gi|332193706|gb|AEE31827.1| protein pumilio 10 [Arabidopsis thaliana]
Length = 528
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 157/308 (50%), Gaps = 21/308 (6%)
Query: 102 LLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
L+A+D+ G + LQ+ + G +F + + ++ + ++ K + +E+Q
Sbjct: 220 LMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKLLVVSDEEQR 279
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKP 221
I +TS+ + ++ ++ G+ I+K++K V + + LV AL+ F +L+
Sbjct: 280 TMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIA-LVKSALEPGFLVLVNDSN 338
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G V+ CLE + ++NK F+ +AA E+C LA H+ GC + + G + ++++
Sbjct: 339 GYHVLQSCLEFLVPNDNK--FVVEAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLVA 396
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL- 340
IS ++ LS++ GNYVVQ +++ + + + R H I+L+ K S V++ CL
Sbjct: 397 EISRDSLRLSQDPFGNYVVQCLIDQQVSSV--NLLLPFRTHCIELATQKFSSHVIEKCLR 454
Query: 341 KYRITVNYIVEEFLL--NSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
KY + IV E L N +Q+ + D Y NYVIQTAL T + RLV K++
Sbjct: 455 KYPESRAEIVRELLSYPNFEQLLQ---DPYANYVIQTALSVTKGA----VRARLVEKVK- 506
Query: 399 NLDSLRFG 406
RFG
Sbjct: 507 -----RFG 509
>gi|401625713|gb|EJS43708.1| puf4p [Saccharomyces arboricola H-6]
Length = 898
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 153/302 (50%), Gaps = 25/302 (8%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 581 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 638
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 639 RIVLTKISSPH-FVEISLNPHGTRALQKLIECITTDE-EAQIVVDSLRPYTVQLSKDLNG 696
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK----- 277
+ V+ +CL+++ N + FI+ A ++C+ +A H GC + +D G R +
Sbjct: 697 NHVIQKCLQRLKPENFQ--FIFDAICDNCIDIATHRHGCCVLQRCLDH--GSREQCETLC 752
Query: 278 -QILYLISVNAASLSRNFSGNYVVQHVLELEDPY----LIETICFSLRGHYIDLSLTKCG 332
++L L+ L+ + GNYVVQ+++ E I L+ I+LS+ K G
Sbjct: 753 DKLLTLVD----KLTLDPFGNYVVQYIITKESAKNKYDYTHKIVHLLKPKVIELSIHKFG 808
Query: 333 SFVVQNCLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
S V++ LK I ++ E L N + I + D YGNYV+QTAL + + N +L++
Sbjct: 809 SNVIEKILKTPIVSEPMILEILNNGGEAGIQSLLNDSYGNYVLQTALDISHKQND-YLYK 867
Query: 391 RL 392
RL
Sbjct: 868 RL 869
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 103/232 (44%), Gaps = 13/232 (5%)
Query: 181 DKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKN 240
D+ G ++K + + ++ D + + K LM G+ ++ + LE++ +
Sbjct: 584 DQHGCRFLQKQLDILGSK--AADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT--TEQR 639
Query: 241 DFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGNYV 299
+ + + H + ++ + G + I+ + QI+ + LS++ +GN+V
Sbjct: 640 IVLTKISSPHFVEISLNPHGTRALQKLIECITTDEEAQIVVDSLRPYTVQLSKDLNGNHV 699
Query: 300 VQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNS 357
+Q L+ P + I ++ + ID++ + G V+Q CL + R + ++ L
Sbjct: 700 IQKCLQRLKPENFQFIFDAICDNCIDIATHRHGCCVLQRCLDHGSREQCETLCDKLLTLV 759
Query: 358 DQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL---RFG 406
D ++ D +GNYV+Q + + N ++V L+ + L +FG
Sbjct: 760 D---KLTLDPFGNYVVQYIITKESAKNKYDYTHKIVHLLKPKVIELSIHKFG 808
>gi|366987657|ref|XP_003673595.1| hypothetical protein NCAS_0A06550 [Naumovozyma castellii CBS 4309]
gi|342299458|emb|CCC67213.1| hypothetical protein NCAS_0A06550 [Naumovozyma castellii CBS 4309]
Length = 828
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 144/282 (51%), Gaps = 10/282 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ++L S+ D +F T +++ + + ++ K IE +
Sbjct: 510 IYSLCKDQHGCRFLQKQLDVLGSKAADLIFEETKFHTIELMTDSFGNYLMQKLIERVTTE 569
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q RI L + Q FV+ +++ G+ +++KL++ + N +++++L+ L
Sbjct: 570 Q--RIELAKIASPQ-FVEIALNPHGTRALQKLIECI-NTEEEAKIIVESLRDSIVQLSKD 625
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL+++ H FI+ A ++C+ +A H GC + +D + +++
Sbjct: 626 LNGNHVVQKCLQKL--HPTDFQFIFDATCDNCVDIATHRHGCCVLQRCLDHGTKEQCEKL 683
Query: 280 LYLISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ + L+ + GNYVVQ+V+ E ++ I L+ +LS+ K GS V
Sbjct: 684 CDKLLSHVDKLTLDPFGNYVVQYVITKETERDEFDYTHKIVHLLKPKVAELSVHKFGSNV 743
Query: 336 VQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ L+ + ++ E L + +I + D YGNYV+QTAL
Sbjct: 744 IEKILRTPVVTETMILELLNHESEIQNLLNDSYGNYVLQTAL 785
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 290 LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVN 347
LS++ +GN+VVQ L+ P + I + + +D++ + G V+Q CL + +
Sbjct: 622 LSKDLNGNHVVQKCLQKLHPTDFQFIFDATCDNCVDIATHRHGCCVLQRCLDHGTKEQCE 681
Query: 348 YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL---R 404
+ ++ L + D ++ D +GNYV+Q + + + ++V L+ + L +
Sbjct: 682 KLCDKLLSHVD---KLTLDPFGNYVVQYVITKETERDEFDYTHKIVHLLKPKVAELSVHK 738
Query: 405 FG 406
FG
Sbjct: 739 FG 740
>gi|39644512|gb|AAH24218.2| PUM2 protein, partial [Homo sapiens]
Length = 489
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 160/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 154 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 213
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ ++K L +
Sbjct: 214 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 270
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 271 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 328
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 329 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 388
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 389 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 444
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 445 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 474
>gi|281344230|gb|EFB19814.1| hypothetical protein PANDA_002991 [Ailuropoda melanoleuca]
Length = 1049
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 160/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 714 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 773
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ ++K L +
Sbjct: 774 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 830
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 831 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 888
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 889 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 948
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 949 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1004
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1005 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1034
>gi|440906069|gb|ELR56374.1| Pumilio-like protein 2 [Bos grunniens mutus]
Length = 1066
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 160/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ ++K L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 847
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 848 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 905
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 906 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 965
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 966 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1021
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1022 HKIRPHISTLRKYTYGKHILAKLEKYYLKN 1051
>gi|41688714|sp|Q8TB72.2|PUM2_HUMAN RecName: Full=Pumilio homolog 2; Short=Pumilio-2
gi|119621229|gb|EAX00824.1| pumilio homolog 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1066
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 160/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ ++K L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 847
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 848 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 905
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 906 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 965
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 966 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1021
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1022 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1051
>gi|410258978|gb|JAA17455.1| pumilio homolog 2 [Pan troglodytes]
gi|410298914|gb|JAA28057.1| pumilio homolog 2 [Pan troglodytes]
gi|410335701|gb|JAA36797.1| pumilio homolog 2 [Pan troglodytes]
Length = 1067
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 160/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ ++K L +
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 848
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 849 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 906
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 907 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 966
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 967 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1022
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1023 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1052
>gi|355565487|gb|EHH21916.1| hypothetical protein EGK_05087 [Macaca mulatta]
gi|355751134|gb|EHH55389.1| hypothetical protein EGM_04593 [Macaca fascicularis]
gi|380811082|gb|AFE77416.1| pumilio homolog 2 [Macaca mulatta]
gi|383417011|gb|AFH31719.1| pumilio homolog 2 [Macaca mulatta]
Length = 1067
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 160/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ ++K L +
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 848
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 849 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 906
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 907 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 966
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 967 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1022
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1023 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1052
>gi|313471420|sp|Q9C8B8.2|PUM17_ARATH RecName: Full=Putative pumilio homolog 17; Short=APUM-17;
Short=AtPUM17
Length = 332
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 138/270 (51%), Gaps = 23/270 (8%)
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL 212
I + L+ + +TS F+ + +K GS S++KLM+ + A+ RL
Sbjct: 65 ISVLDTGMLMWMASFLTSDSDYFMVITRNKNGSKSLQKLMRMSDDMDVFF---FVAIMRL 121
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
F +M+ K S V +Q + +I+ + K + +Y L + L+LA + GCI +N I E+
Sbjct: 122 FIHVMIDKYASYVAIQGM-RIFKQD-KRELMYDHILRYALFLARDQYGCIALNEIIKELD 179
Query: 273 GPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
P R +++ ++S NA LS + GN+VVQHVL+L D I L G+ ++LS K
Sbjct: 180 DPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKY 239
Query: 332 GSFVVQNCLKYR-ITVNYIVEEFLL-NSDQIFRVACDKYGNYV----------IQTA--- 376
GS++V+ L+ R I + IV + L ++ + R+A + GN+V I TA
Sbjct: 240 GSYIVERLLEVRDIPMATIVLDLLACKTEMLIRLARSENGNFVVCKLLELTNDILTADLF 299
Query: 377 --LIETMRPNSLHLHQRLVTKLQQNLDSLR 404
L+ +RP LH+ +K+ L S+R
Sbjct: 300 YSLVNKLRPYRFLLHRFPESKIVAILGSMR 329
>gi|254585741|ref|XP_002498438.1| ZYRO0G10274p [Zygosaccharomyces rouxii]
gi|238941332|emb|CAR29505.1| ZYRO0G10274p [Zygosaccharomyces rouxii]
Length = 900
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 151/299 (50%), Gaps = 13/299 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ +L D +++ ++T +++ + + ++ K +E D
Sbjct: 581 IYSLCKDQHGCRFLQMQLDVLGPEAADAIYDETRDYTVELMTDSFGNYLIQKLLEKVTVD 640
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q RI L + FV+ + + G+ +++KL++ V+ +V+ +LK L
Sbjct: 641 Q--RIFLARIAAPH-FVRIASNPHGTRALQKLVECVSTEE-EAQIVINSLKGSIVELSKD 696
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ +V +CL+++ + + FI+ AA +HC +A H GC + +D + + +
Sbjct: 697 LNGNHIVQKCLQKLQPKDVQ--FIFDAACQHCTEIATHRHGCCVLQRCLDHGSKAQCQAL 754
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFV 335
++ + L+ + GNYVVQ+++ E D Y + L+ ++LSL K GS V
Sbjct: 755 CNILLKHVDHLTLDPFGNYVVQYIITKEVEQDSYDYTYKVVHLLKPKVVELSLHKFGSNV 814
Query: 336 VQNCLKYRITVNYIVEEFLLNSDQIFRVAC--DKYGNYVIQTALIETMRPNSLHLHQRL 392
++ ++ R+ ++ E L N A D YGNYV+QTAL + N+ +L++RL
Sbjct: 815 IEKIIRTRVVSETMIMEILNNRGDTDVPALLNDGYGNYVLQTAL-DVSHENNEYLYKRL 872
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 95/214 (44%), Gaps = 11/214 (5%)
Query: 199 PPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHE 258
P D + + LM G+ ++ + LE++ ++ F+ + A H + +A +
Sbjct: 603 PEAADAIYDETRDYTVELMTDSFGNYLIQKLLEKVT--VDQRIFLARIAAPHFVRIASNP 660
Query: 259 QGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICF 317
G + ++ + QI+ + + LS++ +GN++VQ L+ P ++ I
Sbjct: 661 HGTRALQKLVECVSTEEEAQIVINSLKGSIVELSKDLNGNHIVQKCLQKLQPKDVQFIFD 720
Query: 318 SLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT 375
+ H +++ + G V+Q CL + + + L + D + D +GNYV+Q
Sbjct: 721 AACQHCTEIATHRHGCCVLQRCLDHGSKAQCQALCNILLKHVDHL---TLDPFGNYVVQY 777
Query: 376 ALIETMRPNSLHLHQRLVTKLQQNLDSL---RFG 406
+ + + +S ++V L+ + L +FG
Sbjct: 778 IITKEVEQDSYDYTYKVVHLLKPKVVELSLHKFG 811
>gi|237649070|ref|NP_109648.2| pumilio homolog 2 isoform 1 [Mus musculus]
gi|237649081|ref|NP_001153691.1| pumilio homolog 2 isoform 1 [Mus musculus]
gi|41688655|sp|Q80U58.2|PUM2_MOUSE RecName: Full=Pumilio homolog 2
gi|13919630|gb|AAK21966.1| PUM1 [Mus musculus]
gi|148665992|gb|EDK98408.1| pumilio 2 (Drosophila) [Mus musculus]
Length = 1066
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 160/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ ++K L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 847
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 848 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 905
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 906 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 965
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 966 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1021
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1022 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1051
>gi|11139702|gb|AAG31805.1|AF315590_1 Pumilio 2 [Mus musculus]
Length = 1066
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 160/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ ++K L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 847
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 848 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 905
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 906 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 965
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 966 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1021
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1022 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1051
>gi|395508974|ref|XP_003758782.1| PREDICTED: pumilio homolog 2 isoform 1 [Sarcophilus harrisii]
Length = 1082
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 153/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E N D
Sbjct: 749 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 808
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L +T +I + ++ +G I+K +++++ P + ++K L +
Sbjct: 809 QKLSLTTRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNDMVKELDGHVLKCVKD 863
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + +
Sbjct: 864 QNGNHVVQKCIECV--QPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTVEQTLPV 921
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 922 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVSEIRGKVLTLSQHKFASNVVEKC 981
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + L+
Sbjct: 982 VSHASRAERALLIDEICCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPGQRKV---LM 1037
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1038 HKIRPHVTTLRKYTYGKHI 1056
>gi|351699449|gb|EHB02368.1| Pumilio-like protein 2 [Heterocephalus glaber]
Length = 1059
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 160/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 724 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 783
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ ++K L +
Sbjct: 784 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 840
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 841 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 898
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYVVQHVLE P + +RG + LS K S VV+ C
Sbjct: 899 LEELHQHTEQLVQDQYGNYVVQHVLEHGRPEDRSRVVSEVRGEVLALSQHKFASNVVEKC 958
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +++ P + ++
Sbjct: 959 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MVDMAEPAQRKI---IM 1014
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1015 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1044
>gi|4261598|gb|AAD13898.1|S58126_1111111 Unknown [Saccharomyces cerevisiae]
gi|234327|gb|AAB19616.1| 98 kda [Saccharomyces cerevisiae]
Length = 888
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 150/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D++F ++T +++ + + ++ K +E +Q
Sbjct: 571 LCKDQHGCRFLQKQLDILGSKAADRIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 628
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 629 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTD-EEAQIVVDSLRPYTVQLSKDLNG 686
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 687 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDK 744
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 745 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 804
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 805 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYKRL 859
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 204 LVMKALKRLFRL-------LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLAC 256
L KA R+F LM G+ ++ + LE++ + + + + H + ++
Sbjct: 588 LGSKAADRIFEETKDYTVELMTDSFGNYLIQKLLEEVT--TEQRIVLTKISSPHFVEISL 645
Query: 257 HEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETI 315
+ G + I+ +K QI+ + LS++ +GN+V+Q L+ P + I
Sbjct: 646 NPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFI 705
Query: 316 CFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVEEFLLNSDQIFRVACDKYGNYVI 373
++ ID++ + G V+Q CL + T + + ++ L D ++ D +GNYV+
Sbjct: 706 FDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD---KLTLDPFGNYVV 762
Query: 374 QTALIETMRPNSLHLHQRLVTKLQ 397
Q + + N ++V L+
Sbjct: 763 QYIITKEAEKNKYDYTHKIVHLLK 786
>gi|395508976|ref|XP_003758783.1| PREDICTED: pumilio homolog 2 isoform 2 [Sarcophilus harrisii]
Length = 1002
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 153/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E N D
Sbjct: 669 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 728
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L +T +I + ++ +G I+K +++++ P + ++K L +
Sbjct: 729 QKLSLTTRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNDMVKELDGHVLKCVKD 783
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + +
Sbjct: 784 QNGNHVVQKCIECV--QPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTVEQTLPV 841
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 842 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVSEIRGKVLTLSQHKFASNVVEKC 901
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + L+
Sbjct: 902 VSHASRAERALLIDEICCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPGQRKV---LM 957
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 958 HKIRPHVTTLRKYTYGKHI 976
>gi|357489397|ref|XP_003614986.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355516321|gb|AES97944.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 349
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 7/264 (2%)
Query: 125 LDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFG 184
+D +FN V + + + + +E +DQ L+I ++T V+AS+D +G
Sbjct: 18 IDTMFNEVIGDVVKQTLDPFMSNIVQHVLEFGRDDQRLKIVRKLTQHPDQLVEASLDSYG 77
Query: 185 SSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIY 244
+ ++KL+ + N + LV +L F L+M G+ V+ +CL N+FIY
Sbjct: 78 TKCVQKLI-STHNSKKEIALVSYSLLSGFLYLVMDLDGNQVLQRCLS--CWSVEDNEFIY 134
Query: 245 QAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL 304
AA C +A E GC + I+ G +++++ I A L+++ GN++VQ+++
Sbjct: 135 DAATRFCYAVATDEHGCCLLQRCIEFSNGNSQQKLVKEICKYAFHLAQHEYGNHIVQYII 194
Query: 305 ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI-TVNYIVEEFLLNSDQIFRV 363
++++P I + G Y+ LS+ K VV+ CL++ + T IV+EFL +
Sbjct: 195 QMQNPSAIAELTAQFNGKYVQLSMQKFSIHVVEKCLEHIVETRARIVQEFL-AVPYFENL 253
Query: 364 ACDKYGNYVIQTALIETMRPNSLH 387
D Y NYV+Q AL SLH
Sbjct: 254 LQDPYANYVVQCAL--KFTEGSLH 275
>gi|296809045|ref|XP_002844861.1| pumilio-family RNA binding protein [Arthroderma otae CBS 113480]
gi|238844344|gb|EEQ34006.1| pumilio-family RNA binding protein [Arthroderma otae CBS 113480]
Length = 1069
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 151/315 (47%), Gaps = 39/315 (12%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I + +D+ G +YLQ KL G + +F +++ + + ++ K +E N++
Sbjct: 628 IYGMCKDQHGCRYLQRKLEEGIPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTNDE 687
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R L + L VQ ++++ G+ +++K+++ ++ P + V+ AL L+
Sbjct: 688 Q--RTGLINIAAPHL-VQIALNQHGTRALQKMIEFIST-PEQIQTVINALSGQVVELVQD 743
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FIY A + C+ + H GC + ID G +R ++
Sbjct: 744 LNGNHVIQKCLNRLSAPDAQ--FIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKL 801
Query: 280 LYLISVNAASLSRNFSGNYVVQH-----------------VLELEDPYLIETICFSLRGH 322
+ I+ ++ SL ++ GNYV+Q+ +++L +P +C + +G
Sbjct: 802 IEQITKSSYSLVQDPFGNYVIQYICTFASLLLSYIIILTGIVDLGEPLFTGPLCATFQGS 861
Query: 323 YIDLSLTKCGSFVVQNCLK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA--- 376
LS K S V++ C++ + + +I E L + ++ + D + NYVIQTA
Sbjct: 862 IPALSKQKFSSNVIEKCIRTSDFNMRRAFIKEMLLPH--ELPNMLRDSFANYVIQTAMDF 919
Query: 377 --------LIETMRP 383
LIE +RP
Sbjct: 920 ADPESRNTLIEAVRP 934
>gi|154337334|ref|XP_001564900.1| putative pumillio protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061938|emb|CAM38979.1| putative pumillio protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 573
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 150/278 (53%), Gaps = 12/278 (4%)
Query: 104 AQDEQGSQYLQEKL-TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
A+D+ G +YLQ L T+ D + + + V +++ +QYA F+ K + +D +
Sbjct: 207 AKDQHGCRYLQRWLDTNCDPEVVQVIMDEVIPHVGELMTDQYANFLIQKLFDIMPDD--V 264
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R + I + Q+ + A + G+ S++K+++ ++ R + +++ +AL + L+ G
Sbjct: 265 RYKVAIVAAPQICMIA-LTPHGTFSVQKMIETISTRAEM-EIICEALAKDVVRLVKDAHG 322
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ + L Q + ++K ++IY+A C+ +A ++QGC + + E P++K L +
Sbjct: 323 NHVIQKVL-QRFDFDDK-EYIYRAVATDCVSIAKNKQGCCVLQRCL-EYASPQQKAAL-V 378
Query: 283 ISVNAASLS--RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
V A L ++ GNYV+Q+VLE D + +TI S H + LS+ K S V++ L
Sbjct: 379 DQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIALSFLPHLVQLSMNKFSSNVMEKVL 438
Query: 341 K-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ V + E + N + I R+ D +GNYV+QTAL
Sbjct: 439 RGASKPVQVLYVEEMCNPEIISRLIQDDFGNYVLQTAL 476
>gi|403215598|emb|CCK70097.1| hypothetical protein KNAG_0D03510 [Kazachstania naganishii CBS
8797]
Length = 829
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 151/300 (50%), Gaps = 15/300 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ++L D +F E T +++ + + ++ K IE +
Sbjct: 509 IYTLCKDQHGCRFLQKQLDIMGKEAADVIFEETKEHTVELMTDSFGNYLVQKLIERVTIE 568
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +++ + FV + + G+ +++KL++ V++ P +++ LK +L
Sbjct: 569 QRTELSMIASPH---FVSIAKNPHGTRALQKLIECVSS-PEEAQIIISTLKDCVVVLSKD 624
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CLE++ + + FI+ A + C +A H GC + +D + + +
Sbjct: 625 LNGNHVIQKCLERLQPPDFQ--FIFDATCKECSSIATHRHGCCVLQRCLDFGTKAQFQSL 682
Query: 280 LYLISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++ N L+ + GNYVVQ+++ E +D I SL+ +LS+ K GS V
Sbjct: 683 CNVLLSNIDKLTLDPFGNYVVQYIVTKETERKDYDYTFKIANSLKAKMGELSVHKFGSNV 742
Query: 336 VQNCLKYRITVNYIVEEFLLNSD---QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
++ L+ + +++E LLN D +I + D YGNYV+QT L + + N +++ RL
Sbjct: 743 IEKLLRTPVVCEALIQE-LLNDDSGKEIELLLNDSYGNYVLQTTLDVSHKRNK-YMYDRL 800
>gi|334313569|ref|XP_003339931.1| PREDICTED: pumilio homolog 2 isoform 2 [Monodelphis domestica]
Length = 1002
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E N D
Sbjct: 669 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 728
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K +++++ P + ++K L +
Sbjct: 729 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 783
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + +
Sbjct: 784 QNGNHVVQKCIECV--QPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPV 841
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 842 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQHKFASNVVEKC 901
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + L+
Sbjct: 902 VSHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKV---LM 957
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 958 HKIRPHVTTLRKYTYGKHI 976
>gi|126305609|ref|XP_001369426.1| PREDICTED: pumilio homolog 2 isoform 1 [Monodelphis domestica]
Length = 1082
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E N D
Sbjct: 749 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 808
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K +++++ P + ++K L +
Sbjct: 809 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 863
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + +
Sbjct: 864 QNGNHVVQKCIECV--QPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPV 921
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 922 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQHKFASNVVEKC 981
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + L+
Sbjct: 982 VSHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKV---LM 1037
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1038 HKIRPHVTTLRKYTYGKHI 1056
>gi|345317188|ref|XP_001506884.2| PREDICTED: pumilio homolog 2-like [Ornithorhynchus anatinus]
Length = 429
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 157/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 96 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 155
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K +++++ P + ++K L +
Sbjct: 156 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 210
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 211 QNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 268
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 269 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 328
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E SD ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 329 VTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 384
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 385 HKIRPHISTLRKYTYGKHILAKLEKYYLKN 414
>gi|224048793|ref|XP_002187244.1| PREDICTED: pumilio homolog 2 [Taeniopygia guttata]
Length = 1061
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 159/330 (48%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 728 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 787
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K +++++ P + ++K L +
Sbjct: 788 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 842
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 843 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 900
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 901 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 960
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 961 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1016
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1017 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1046
>gi|6321424|ref|NP_011501.1| Puf4p [Saccharomyces cerevisiae S288c]
gi|1723801|sp|P25339.2|PUF4_YEAST RecName: Full=Pumilio homology domain family member 4
gi|1322473|emb|CAA96714.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285812184|tpg|DAA08084.1| TPA: Puf4p [Saccharomyces cerevisiae S288c]
gi|392299246|gb|EIW10340.1| Puf4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 888
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 571 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 628
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 629 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTDE-EAQIVVDSLRPYTVQLSKDLNG 686
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 687 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDK 744
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 745 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 804
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 805 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYKRL 859
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 22/226 (9%)
Query: 175 FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIY 234
F+Q +D GS + D + + K LM G+ ++ + LE++
Sbjct: 580 FLQKQLDILGSKAA--------------DAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 625
Query: 235 HHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRN 293
+ + + + H + ++ + G + I+ +K QI+ + LS++
Sbjct: 626 --TEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKD 683
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVE 351
+GN+V+Q L+ P + I ++ ID++ + G V+Q CL + T + + +
Sbjct: 684 LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCD 743
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ L D ++ D +GNYV+Q + + N ++V L+
Sbjct: 744 KLLALVD---KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLK 786
>gi|349578206|dbj|GAA23372.1| K7_Puf4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 889
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 572 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 629
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 630 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTDE-EAQIVVDSLRPYTVQLSKDLNG 687
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 688 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDK 745
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 746 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 805
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 806 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYKRL 860
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 22/226 (9%)
Query: 175 FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIY 234
F+Q +D GS + D + + K LM G+ ++ + LE++
Sbjct: 581 FLQKQLDILGSKAA--------------DAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 626
Query: 235 HHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRN 293
+ + + + H + ++ + G + I+ +K QI+ + LS++
Sbjct: 627 --TEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKD 684
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVE 351
+GN+V+Q L+ P + I ++ ID++ + G V+Q CL + T + + +
Sbjct: 685 LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCD 744
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ L D ++ D +GNYV+Q + + N ++V L+
Sbjct: 745 KLLALVD---KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLK 787
>gi|157869162|ref|XP_001683133.1| putative pumillio protein 3 [Leishmania major strain Friedlin]
gi|68224016|emb|CAJ05068.1| putative pumillio protein 3 [Leishmania major strain Friedlin]
Length = 569
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 149/278 (53%), Gaps = 12/278 (4%)
Query: 104 AQDEQGSQYLQEKL-TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
A+D+ G +YLQ L T+ D L + N + +++ +QYA F+ K + +D +
Sbjct: 206 AKDQHGCRYLQRWLDTNCDPEALQVMMNEIIPHVGELMTDQYANFLIQKLFDIMPDD--V 263
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R + I + Q+ + S+ G+ S++K+++ ++ R + +++ +AL + L+ G
Sbjct: 264 RYKVAIVAAPQICM-ISLTPHGTFSVQKMIETISTREEM-EIISEALCKDVVRLVKDAHG 321
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ + L Q + ++K ++IY+A C+ +A ++QGC + + E PR+K L +
Sbjct: 322 NHVIQKVL-QRFDFDDK-EYIYRAVATDCVSIAKNKQGCCVLQRCL-EHASPRQKAAL-V 377
Query: 283 ISVNAASLS--RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
V A L ++ GNYV+Q+VLE D + +TI + H + LS+ K S V++ L
Sbjct: 378 DQVLACCLQIVQDPFGNYVLQYVLEEHDSKINDTIALAFLPHLVQLSMNKFSSNVMEKVL 437
Query: 341 K-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ V + E + N + I + D YGNYV+QTAL
Sbjct: 438 RGASGPVQVMYMEEMCNPEIISHLIQDDYGNYVLQTAL 475
>gi|86129498|ref|NP_001034381.1| pumilio homolog 2 [Gallus gallus]
gi|82569974|gb|ABB83589.1| pumilio 2 [Gallus gallus]
Length = 1061
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 159/330 (48%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 728 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 787
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K +++++ P + ++K L +
Sbjct: 788 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 842
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 843 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 900
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 901 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 960
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 961 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1016
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1017 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1046
>gi|326916555|ref|XP_003204572.1| PREDICTED: pumilio homolog 2-like [Meleagris gallopavo]
Length = 1061
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 159/330 (48%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 728 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 787
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K +++++ P + ++K L +
Sbjct: 788 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 842
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 843 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 900
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 901 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 960
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 961 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1016
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1017 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1046
>gi|315048481|ref|XP_003173615.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311341582|gb|EFR00785.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1018
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 149/306 (48%), Gaps = 31/306 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I + +D+ G +YLQ KL G + +F +++ + + ++ K +E N++
Sbjct: 590 IYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTNDE 649
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R L + L VQ ++++ G+ +++K+++ ++ P + V+ AL L+
Sbjct: 650 Q--RTGLINIAAPHL-VQIALNQHGTRALQKMIEFIST-PEQIQTVIHALSGQVVELVQD 705
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL ++ + + FIY A + C+ + H GC + ID G +R ++
Sbjct: 706 LNGNHVIQKCLNRLSAPDAQ--FIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKL 763
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLT--------KC 331
+ I+ ++ SL ++ GNYV+Q++ L I F L GH+ LS K
Sbjct: 764 IEQITKSSYSLVQDPFGNYVIQYICRLTSSTWILESLF-LPGHFAQLSREASPALSKQKF 822
Query: 332 GSFVVQNCLK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------L 377
S V++ C++ + + +I E +L+ ++ + D + NYVIQTA L
Sbjct: 823 SSNVIEKCIRTSDFNMRRAFIKE--MLSPHELPNMLRDSFANYVIQTAMDFADPESRNTL 880
Query: 378 IETMRP 383
IE +RP
Sbjct: 881 IEAVRP 886
>gi|449268799|gb|EMC79640.1| Pumilio like protein 2 [Columba livia]
Length = 1062
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 159/330 (48%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 729 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 788
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K +++++ P + ++K L +
Sbjct: 789 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 843
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 844 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 901
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 902 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 961
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 962 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1017
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1018 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1047
>gi|365765603|gb|EHN07110.1| Puf4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 898
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 581 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 638
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 639 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTDE-EAQIVVDSLRPYTVQLSKDLNG 696
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 697 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDK 754
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 755 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 814
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 815 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYRRL 869
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 22/226 (9%)
Query: 175 FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIY 234
F+Q +D GS + D + + K LM G+ ++ + LE++
Sbjct: 590 FLQKQLDILGSKAA--------------DAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 635
Query: 235 HHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRN 293
+ + + + H + ++ + G + I+ +K QI+ + LS++
Sbjct: 636 --TEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKD 693
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVE 351
+GN+V+Q L+ P + I ++ ID++ + G V+Q CL + T + + +
Sbjct: 694 LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCD 753
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ L D ++ D +GNYV+Q + + N ++V L+
Sbjct: 754 KLLALVD---KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLK 796
>gi|323333456|gb|EGA74850.1| Puf4p [Saccharomyces cerevisiae AWRI796]
Length = 896
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 579 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 636
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 637 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTDE-EAQIVVDSLRPYTVQLSKDLNG 694
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 695 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDK 752
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 753 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 812
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 813 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYRRL 867
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 22/226 (9%)
Query: 175 FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIY 234
F+Q +D GS + D + + K LM G+ ++ + LE++
Sbjct: 588 FLQKQLDILGSKAA--------------DAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 633
Query: 235 HHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRN 293
+ + + + H + ++ + G + I+ +K QI+ + LS++
Sbjct: 634 --TEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKD 691
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVE 351
+GN+V+Q L+ P + I ++ ID++ + G V+Q CL + T + + +
Sbjct: 692 LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCD 751
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ L D ++ D +GNYV+Q + + N ++V L+
Sbjct: 752 KLLALVD---KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLK 794
>gi|190406983|gb|EDV10250.1| protein PUF4 [Saccharomyces cerevisiae RM11-1a]
Length = 894
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 577 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 634
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 635 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTDE-EAQIVVDSLRPYTVQLSKDLNG 692
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 693 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDK 750
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 751 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 810
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 811 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYRRL 865
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 22/226 (9%)
Query: 175 FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIY 234
F+Q +D GS + D + + K LM G+ ++ + LE++
Sbjct: 586 FLQKQLDILGSKAA--------------DAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 631
Query: 235 HHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRN 293
+ + + + H + ++ + G + I+ +K QI+ + LS++
Sbjct: 632 --TEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKD 689
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVE 351
+GN+V+Q L+ P + I ++ ID++ + G V+Q CL + T + + +
Sbjct: 690 LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCD 749
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ L D ++ D +GNYV+Q + + N ++V L+
Sbjct: 750 KLLALVD---KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLK 792
>gi|151943274|gb|EDN61587.1| pumilio-homology domain family [Saccharomyces cerevisiae YJM789]
gi|259146487|emb|CAY79744.1| Puf4p [Saccharomyces cerevisiae EC1118]
Length = 892
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 575 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 632
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 633 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTDE-EAQIVVDSLRPYTVQLSKDLNG 690
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 691 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDK 748
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 749 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 808
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 809 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYRRL 863
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 22/226 (9%)
Query: 175 FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIY 234
F+Q +D GS + D + + K LM G+ ++ + LE++
Sbjct: 584 FLQKQLDILGSKAA--------------DAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 629
Query: 235 HHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRN 293
+ + + + H + ++ + G + I+ +K QI+ + LS++
Sbjct: 630 --TEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKD 687
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVE 351
+GN+V+Q L+ P + I ++ ID++ + G V+Q CL + T + + +
Sbjct: 688 LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCD 747
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ L D ++ D +GNYV+Q + + N ++V L+
Sbjct: 748 KLLALVD---KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLK 790
>gi|326328009|pdb|3Q0Q|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nrea
gi|326328011|pdb|3Q0R|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nreb
gi|326328013|pdb|3Q0S|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With Erk2 Nre
Length = 351
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 26 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 85
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ ++K L +
Sbjct: 86 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 142
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 143 QNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 200
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 201 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 260
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 261 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 316
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 317 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 346
>gi|9757838|dbj|BAB08275.1| unnamed protein product [Arabidopsis thaliana]
Length = 546
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 141/292 (48%), Gaps = 20/292 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
A+D++ S+ L + G +D ++N + +++ + Y V + C+ +Q++
Sbjct: 208 FAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQIV 267
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANR-----PPLLDLVMKALKRLFRLLM 217
++ +T Q FV +D G+++I+ L+ + R P ++D+V +L +
Sbjct: 268 QLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVDVVRTVALQLSK--- 324
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR-- 275
+ V+L C H + + +++C +A + GC + ++ + P
Sbjct: 325 -SNHAIFVILACFRLFPLHCR---LLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLE 380
Query: 276 -RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
R++++ NA L N GNYVVQ+++EL + YLI+ + L G+Y L+ K GS
Sbjct: 381 IRQRLIMEAIANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSH 440
Query: 335 VVQNCLKYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-LIETMRPN 384
VQ LK R I IV + L D + D +GNYVIQTA + +RPN
Sbjct: 441 AVQKLLKLRWIDSRVIVIDLLREIDTLL---LDPFGNYVIQTAWFVSKVRPN 489
>gi|357443885|ref|XP_003592220.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355481268|gb|AES62471.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 416
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 151/317 (47%), Gaps = 12/317 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIIC--NQYARFVFGKFIETCN 157
+L +A D +G QYLQ K+ G+ ++ + ++V + Q++ N Y +
Sbjct: 94 VLSMAMDWRGCQYLQAKIEKGNPADVEFILSIVKDHVHQLMTHNNNYLIKKIFQARSGVT 153
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
+Q+ I L I S DQ +D G+ ++ ++K + ++V+ + R+ L+
Sbjct: 154 PEQMESIVLSIISDDQKLKHVCMDNRGTRVMQNMLKNIKLSFTTYNVVVCTMHRITLALV 213
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G V+LQCL + + +K + Q A +C+ + + GC + + ++G +
Sbjct: 214 KSFNGGYVILQCL-KFFQSEHKRVILDQVA-RNCVDITTDKIGCSIIQKCLSLVEGSVKS 271
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ I NA L+ + GNYV+Q V+ +E E + LRG + S++K S VV+
Sbjct: 272 LLVTEIISNAMILAEDPYGNYVLQFVITMESSATREKMIKQLRGKFARFSMSKHSSNVVE 331
Query: 338 NCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
+ L++ V IVEE + + D V D +GNYV Q AL + LH+ L
Sbjct: 332 DLLRFSNENDVAVIVEEIMKSCD-FLNVVQDPFGNYVAQRAL----KCTKGRLHRELAKL 386
Query: 396 LQQNLDSLRFG-YGKHV 411
+ N L+ YGK V
Sbjct: 387 ITSNKRILQSHLYGKRV 403
>gi|401421895|ref|XP_003875436.1| RNA-binding regulatory protein (pumilio family),putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491673|emb|CBZ26946.1| RNA-binding regulatory protein (pumilio family),putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 568
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 148/278 (53%), Gaps = 12/278 (4%)
Query: 104 AQDEQGSQYLQEKL-TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
A+D+ G +YLQ L T+ D L + + + +++ +QYA F+ K + +D +
Sbjct: 206 AKDQHGCRYLQRWLDTNCDPETLQVMMDEIIPHVGELMTDQYANFLIQKLFDIMPDD--V 263
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R + I + Q+ + S+ G+ S++K+++ ++ R +++ +AL + L+ G
Sbjct: 264 RYKVAIVAAPQICM-ISLTPHGTFSVQKMIETISTREET-EIICEALAKDVVRLVKDAHG 321
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ + L Q + ++K ++IY+A C+ +A ++QGC + + E PR+K L +
Sbjct: 322 NHVIQKVL-QRFDFDDK-EYIYRAVSTDCVSIAKNKQGCCVLQRSL-EHASPRQKAAL-V 377
Query: 283 ISVNAASLS--RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
V A L ++ GNYV+Q+VLE D + +TI F+ H + LS+ K S V++ L
Sbjct: 378 DQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIAFAFLPHLVHLSMNKFSSNVMEKVL 437
Query: 341 K-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ V + E + N I + D YGNYV+QTAL
Sbjct: 438 RGASRPVQVMYMEEMCNPGIISHLIQDDYGNYVLQTAL 475
>gi|348574638|ref|XP_003473097.1| PREDICTED: pumilio homolog 2 isoform 1 [Cavia porcellus]
Length = 1068
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E N D
Sbjct: 735 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 794
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 795 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 849
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 850 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 907
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 908 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 967
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 968 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1023
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1024 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1053
>gi|291387142|ref|XP_002710095.1| PREDICTED: pumilio homolog 2-like isoform 2 [Oryctolagus cuniculus]
Length = 1065
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 846
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 847 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 904
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 905 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 964
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E SD ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 965 VTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1020
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1021 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1050
>gi|68073265|ref|XP_678547.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56499050|emb|CAH95801.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 851
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 157/319 (49%), Gaps = 19/319 (5%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
+ +A+D+ + LQ+ L + +D+++N E +++ + + ++ K IE C
Sbjct: 461 GNVYKIAKDQSKCRTLQKILDKKNQSCIDEIYNEALEHIIELMMDPFGNYLCQKLIEVCT 520
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
+Q+ +I + S D+L + AS+ G+ +++KL++ + P + + +LK +L+
Sbjct: 521 PEQIEKIIDK--SSDEL-INASISVHGTRTVQKLIEMIK-TPSQIRKITNSLKNSIIILI 576
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
G+ VV +CL + + +FIY L++ + ++ H GC + ID +++
Sbjct: 577 KDINGNHVVQKCLGTLSSI--QCNFIYDEILKNFVEVSTHRHGCCVIQRCIDSANEAQKE 634
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPY----LIETICFSLRGHYIDLSLTKCGS 333
++ IS N+ L ++ GNYVVQ++L + + +IE + + H ++ K S
Sbjct: 635 LLINKISSNSLELVQDAFGNYVVQYILNMGNEKVNFEIIEKLLKDIEKH----AVQKFSS 690
Query: 334 FVVQNCLKYRITV--NYIVEEFLLNSDQIFR-VACDKYGNYVIQTALIETMRPNSLHLHQ 390
V++ CL T ++ L + + V DKYGNYVIQ AL P L +
Sbjct: 691 NVIEKCLIIGTTKCRKIMINGLLKKGKNVLKNVILDKYGNYVIQRALSVAPEPELTKLVE 750
Query: 391 RLVTKLQQ--NLDSLRFGY 407
+ +++ N++S R +
Sbjct: 751 GIKPYIKELRNINSGRIAW 769
>gi|291387144|ref|XP_002710096.1| PREDICTED: pumilio homolog 2-like isoform 3 [Oryctolagus cuniculus]
Length = 1009
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 676 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 735
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 736 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 790
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 791 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 848
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 849 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 908
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E SD ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 909 VTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 964
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 965 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 994
>gi|270016510|gb|EFA12956.1| pumilio [Tribolium castaneum]
Length = 1102
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VFN + + ++ + + +V KF E +
Sbjct: 765 IVEFSQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKFFEFGTAE 824
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++ P +++ L +
Sbjct: 825 QKTTLAQKVRGH---VLPLALQMYGCRVIQKALESIP--PEQQQEIVRELDGHVLKCVKD 879
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + N FI Q+ L+ H GC + ++ + I
Sbjct: 880 QNGNHVVQKCIECV--DPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQTAPI 937
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P + S+RG + LS K S VV+ C
Sbjct: 938 LAELHQHTDQLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQHKFASNVVEKC 997
Query: 340 LKY--RITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE N + + + D+Y NYV+Q +I+ P + L+ K+
Sbjct: 998 VTHATRAERALLIEEVCGFNDNALHVMMKDQYANYVVQK-MIDVSEPTQRKV---LMHKI 1053
Query: 397 QQNLDSLR-FGYGKHV 411
+ +L+SLR + YGKH+
Sbjct: 1054 RPHLNSLRKYTYGKHI 1069
>gi|189242503|ref|XP_967865.2| PREDICTED: similar to pumilio [Tribolium castaneum]
Length = 718
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VFN + + ++ + + +V KF E +
Sbjct: 381 IVEFSQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKFFEFGTAE 440
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++ P +++ L +
Sbjct: 441 QKTTLAQKVRGH---VLPLALQMYGCRVIQKALESIP--PEQQQEIVRELDGHVLKCVKD 495
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + N FI Q+ L+ H GC + ++ + I
Sbjct: 496 QNGNHVVQKCIECV--DPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQTAPI 553
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P + S+RG + LS K S VV+ C
Sbjct: 554 LAELHQHTDQLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQHKFASNVVEKC 613
Query: 340 LKY--RITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE N + + + D+Y NYV+Q +I+ P + L+ K+
Sbjct: 614 VTHATRAERALLIEEVCGFNDNALHVMMKDQYANYVVQK-MIDVSEPTQRKV---LMHKI 669
Query: 397 QQNLDSLR-FGYGKHV 411
+ +L+SLR + YGKH+
Sbjct: 670 RPHLNSLRKYTYGKHI 685
>gi|297795139|ref|XP_002865454.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311289|gb|EFH41713.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 505
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 144/304 (47%), Gaps = 18/304 (5%)
Query: 82 QTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIIC 141
+ P G+ + +A+D S+ L E + G +D +F+ + +++
Sbjct: 173 ENPWGYINQDQMENRRGSLYAIAKDAVWSKKLLETIYQGTKETIDTIFDRIIVHICELMV 232
Query: 142 NQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANR--- 198
+ Y + V I C +Q+++I +T FV D G+++I++L+ ++ R
Sbjct: 233 DPYGKDVVMLLIGKCCSEQIIQIVDLVTQDMFQFVNICFDLRGTAAIQELLDSIHKRAND 292
Query: 199 --PPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLAC 256
P ++DL+ +L + + ++L C + + ++ + +HC ++
Sbjct: 293 QIPRIMDLINSVGLQLAK----SSNARFLILSCFRLFPLSHCR--YLLEVVAQHCYEISI 346
Query: 257 HEQGCINMNNFIDEMKGPR---RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIE 313
+ GC +D+ + P R++++ + +A L N GNYVVQ+++EL + ++I
Sbjct: 347 DQNGCCLYQQCLDKNRVPNPEIRQRLISEVISHALRLCLNCYGNYVVQYIVELNNQHVIN 406
Query: 314 TICFSLRGHYIDLSLTKCGSFVVQNCLKYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYV 372
+ L G+Y L+ K GS VVQ L+ R + IV + L QI + D +GNYV
Sbjct: 407 ALVRQLIGNYAHLARNKYGSHVVQKLLRLRGVDTRLIVVDLL---SQIDTLLLDPFGNYV 463
Query: 373 IQTA 376
IQTA
Sbjct: 464 IQTA 467
>gi|297265504|ref|XP_001095426.2| PREDICTED: pumilio homolog 2-like isoform 1 [Macaca mulatta]
Length = 986
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 159/330 (48%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 653 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 712
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ + ++K L +
Sbjct: 713 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--MQSEMVKELDGHVLKCVKD 767
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 768 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 825
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 826 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 885
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 886 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 941
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 942 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 971
>gi|348574640|ref|XP_003473098.1| PREDICTED: pumilio homolog 2 isoform 2 [Cavia porcellus]
Length = 989
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E N D
Sbjct: 656 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 715
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 716 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 770
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 771 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 828
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 829 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 888
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 889 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 944
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 945 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 974
>gi|291387140|ref|XP_002710094.1| PREDICTED: pumilio homolog 2-like isoform 1 [Oryctolagus cuniculus]
Length = 986
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 653 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 712
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 713 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 767
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 768 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 825
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 826 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 885
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E SD ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 886 VTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 941
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 942 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 971
>gi|82539941|ref|XP_724322.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478929|gb|EAA15887.1| 00806 domains.-related [Plasmodium yoelii yoelii]
Length = 923
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 144/286 (50%), Gaps = 17/286 (5%)
Query: 99 GILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNE 158
+ +A+D+ + LQ+ L + +D+++N E +++ + + ++ K IE C
Sbjct: 637 NVYKIAKDQSKCRTLQKILDKKNQSCIDEIYNEALEHIIELMMDPFGNYLCQKLIEVCTP 696
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
+Q+ +I + S D+L + AS+ G+ +++KL++ + P + + +LK +L+
Sbjct: 697 EQIEKIIDK--SSDEL-INASISVHGTRTVQKLIEMIK-TPSQIRKITNSLKNSIIILIK 752
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
G+ VV +CL + + + +FIY L++ + ++ H GC + ID +++
Sbjct: 753 DINGNHVVQKCL--VTLSSTQCNFIYDEILKNFVEVSTHRHGCCVIQRCIDSANEAQKEL 810
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPY----LIETICFSLRGHYIDLSLTKCGSF 334
++ IS N L ++ GNYVVQ++L + + +IE + + H ++ K S
Sbjct: 811 LINKISSNCLELVQDAFGNYVVQYILNMGNEKVNFEIIEKLLKDIEKH----AVQKFSSN 866
Query: 335 VVQNCLKYRITV--NYIVEEFLLNSDQIFR-VACDKYGNYVIQTAL 377
V++ CL T ++ L I + V DKYGNYVIQ AL
Sbjct: 867 VIEKCLIIGTTKCRKMMINGLLKKGKNILKNVILDKYGNYVIQRAL 912
>gi|15237851|ref|NP_200736.1| pumilio 16 [Arabidopsis thaliana]
gi|313471419|sp|Q9FIE9.2|PUM16_ARATH RecName: Full=Putative pumilio homolog 16; Short=APUM-16;
Short=AtPUM16
gi|332009782|gb|AED97165.1| pumilio 16 [Arabidopsis thaliana]
Length = 332
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 8/247 (3%)
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL 212
I + L+ + +TS F+ + +K GS +++KLM + +A+ RL
Sbjct: 65 ISVLDTGTLMWMASLMTSDCDYFMVITTNKNGSKTLQKLMGMSDDMDVFF---FEAIMRL 121
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
F +M K S V +Q + +K + +Y L + +LA + GCI +N I ++
Sbjct: 122 FIHVMTDKYASYVTIQGMR--VFQQDKRELMYDQILRYACFLAGDQYGCIALNEIITDLD 179
Query: 273 GPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
P R Q+L +++ NA LS + GN+VVQHVL+L D I L G+ ++LS K
Sbjct: 180 DPYYRDQLLDIVANNALLLSNDAYGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKY 239
Query: 332 GSFVVQNCLKY-RITVNYIVEEFLL-NSDQIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
GS++V+ L+ + + +V + L ++ + R+A +YGN+V+ AL T + L
Sbjct: 240 GSYIVERLLEAGDVPMATVVLDLLACKTEMLIRLARSEYGNFVVCKALELTNEILTADLF 299
Query: 390 QRLVTKL 396
LV +L
Sbjct: 300 YGLVNRL 306
>gi|224056214|ref|XP_002298759.1| predicted protein [Populus trichocarpa]
gi|222846017|gb|EEE83564.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 132/267 (49%), Gaps = 6/267 (2%)
Query: 113 LQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQD 172
LQ L ++ +F V ++ ++ +Q+ V K E C+E Q+ ++ L +
Sbjct: 310 LQGVLDERKPDLIEMIFLEVKDYVHDLMEDQFGNHVIQKLFEVCSEAQMTQLILSLIHNQ 369
Query: 173 QLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQ 232
+ + G+ +++K+++ + P L+ + L R +L + G V+ +CLE
Sbjct: 370 RRLLGLCFHLVGTRAMQKMIEHIKT-PKQRLLLTQVLIRRTVILSQNQNGYHVIQKCLEH 428
Query: 233 IYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSR 292
+ ++ I + A E L +A + GC +N +D +G + +L NA LS
Sbjct: 429 -FPFDDIKPLIKEIA-ESFLDIAMDKSGCCVLNRALDCAQGELKHLLLLETIANAMLLSE 486
Query: 293 NFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YIV 350
+ GNYVVQHVL+ + I L+G+++ LS+ K GS VV+ CL + N I+
Sbjct: 487 SPYGNYVVQHVLDERIQHATIGILEKLKGYFVSLSMNKFGSNVVEKCLIWSGEENASMII 546
Query: 351 EEFLLNSDQIFRVACDKYGNYVIQTAL 377
EEF ++S + + +GNYV+Q AL
Sbjct: 547 EEF-MHSPYFVNICRNNFGNYVVQKAL 572
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 198 RPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEH----CLY 253
+P L++++ +K LM + G+ V+ Q L ++ I +L H L
Sbjct: 318 KPDLIEMIFLEVKDYVHDLMEDQFGNHVI-QKLFEVCSEAQMTQLIL--SLIHNQRRLLG 374
Query: 254 LACHEQGCINMNNFIDEMKGPRRKQILYLISVN-AASLSRNFSGNYVVQHVLELEDPYLI 312
L H G M I+ +K P+++ +L + + LS+N +G +V+Q LE I
Sbjct: 375 LCFHLVGTRAMQKMIEHIKTPKQRLLLTQVLIRRTVILSQNQNGYHVIQKCLEHFPFDDI 434
Query: 313 ETICFSLRGHYIDLSLTKCGSFVV-------QNCLKYRITVNYIVEEFLLNSDQIFRVAC 365
+ + + ++D+++ K G V+ Q LK+ + + I LL+
Sbjct: 435 KPLIKEIAESFLDIAMDKSGCCVLNRALDCAQGELKHLLLLETIANAMLLSES------- 487
Query: 366 DKYGNYVIQTALIETMRPNSLHLHQRL 392
YGNYV+Q L E ++ ++ + ++L
Sbjct: 488 -PYGNYVVQHVLDERIQHATIGILEKL 513
>gi|398015064|ref|XP_003860722.1| RNA-binding regulatory protein (pumilio family), putative
[Leishmania donovani]
gi|322498944|emb|CBZ34017.1| RNA-binding regulatory protein (pumilio family), putative
[Leishmania donovani]
Length = 554
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 148/277 (53%), Gaps = 10/277 (3%)
Query: 104 AQDEQGSQYLQEKL-TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
A+D+ G +YLQ L T+ D+ L + + + +++ +QYA F+ K + +D +
Sbjct: 206 AKDQHGCRYLQRWLDTNCDTEALQVMMDEIIPHVGELMTDQYANFLIQKLFDIMPDD--V 263
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R + + + + + S+ G+ S++K+++ ++ R + ++ +AL + L+ G
Sbjct: 264 RYKVAVVAAPHICM-ISLTPHGTFSVQKMIETISTREEM-KIICEALAKDVVRLVKDAHG 321
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY- 281
+ V+ + L++ + ++K ++IY+A C+ +A ++QGC + + E PR+K L
Sbjct: 322 NHVIQKVLQR-FDFDDK-EYIYRAVATDCVSIAKNKQGCCVLQRCL-EHASPRQKAALVD 378
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
+ ++++ GNYV+Q+VLE D + +TI + H + LS+ K S V++ L+
Sbjct: 379 QVLACCLQIAQDPFGNYVLQYVLEAHDSKINDTIALAFLPHLVQLSMNKFSSNVMEKVLR 438
Query: 342 -YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
V + E + N + I + D YGNYV+QTAL
Sbjct: 439 GASRPVQVMYMEEMCNPEIISHLIQDDYGNYVLQTAL 475
>gi|102140025|gb|ABF70156.1| pumilio/Puf RNA-binding domain-containing protein [Musa acuminata]
Length = 1129
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 8/227 (3%)
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K + ++ Q ++ + ++ ++ + D GS +++L+K + P V KALK
Sbjct: 841 KLLHVADDVQRRQMEDYVRKDHRMLLKVAKDSSGSECVKELVK-ILKFP-----VGKALK 894
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
+ LM K G SVV CLE + + NK QAAL+ LA + GC+ + + +D
Sbjct: 895 CHVKQLMTCKNGKSVVDCCLEHLNYEANK--VFIQAALDSFTDLASDKCGCLALVSCMDY 952
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
P R +L + A +LS + GNYVVQ L + + ETIC L G ++LS+ K
Sbjct: 953 STNPHRNLLLKKTTAGALALSCHIYGNYVVQCALNMNVAWAAETICADLAGSLMELSVHK 1012
Query: 331 CGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
GS+VVQ CL+ + I L+ + + Y NYV++TAL
Sbjct: 1013 NGSYVVQRCLESSGRHHIIRGLDCLSQGDLEDMLQHYYANYVLKTAL 1059
>gi|431911864|gb|ELK14008.1| Pumilio like protein 2 [Pteropus alecto]
Length = 1056
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 723 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 782
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 783 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 837
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 838 QNGNHVVQKCIECVQPQSLQ--FIIDAFKAQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 895
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 896 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 955
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 956 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1011
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1012 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1041
>gi|384494806|gb|EIE85297.1| hypothetical protein RO3G_10007 [Rhizopus delemar RA 99-880]
Length = 416
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 141/284 (49%), Gaps = 49/284 (17%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I LL +D+ G +YLQ+KL + + +FN V Y FV
Sbjct: 103 IYLLCKDQNGCRYLQKKLEETNLEQREIIFNQV-----------YPHFV----------- 140
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+L + S++ G+ +++++++ ++ LD ++A+ + F +++T
Sbjct: 141 -------------ELMTEISLNMHGTRAVQRMIELIS-----LDEQIQAIVKAFSPIVVT 182
Query: 220 K----PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
G+ V+ +CL + + + FIY A E+C+ +A H GC + ID +
Sbjct: 183 LIKDINGNHVIQKCLHRFTTKHKQ--FIYDAVSENCIEVATHRHGCCVLQRCIDYSANHQ 240
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
KQ++ I +A +L ++ GNYVVQ+VLEL D + + G+ LS+ K S V
Sbjct: 241 TKQLVDEIISHALTLVQDPYGNYVVQYVLELGDAKFSDRLIRQFIGNLSKLSIQKYSSNV 300
Query: 336 VQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ C++ T + +++E ++N D++ ++ D Y NYV+QTAL
Sbjct: 301 MEKCIRVAEEDTRHDLIQE-MMNKDRLEKLLKDSYANYVVQTAL 343
>gi|226287941|gb|EEH43454.1| pumilio domain-containing protein [Paracoccidioides brasiliensis
Pb18]
Length = 925
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 154/324 (47%), Gaps = 56/324 (17%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+ +D+ G +YLQ+KL + + +F +++ + + ++ K +E N++Q
Sbjct: 527 MCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSNDEQ-- 584
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V+ ++++ G+ +++K+++ ++
Sbjct: 585 RTALINNAAPQL-VKIALNQHGTRALQKMIEFIS-------------------------- 617
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
EQ FIY A C+ + H GC + ID G +R +++
Sbjct: 618 ------TPEQ---------FIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQ 662
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ NA +L ++ GNYVVQ++L+L + + IE IC S RG+ LS K S V++ C+
Sbjct: 663 ITKNAFTLVQDPFGNYVVQYILDLNERHFIEPICRSFRGNIPALSKQKFSSNVIEKCI-- 720
Query: 343 RITVN----YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
R N ++EE L+ S ++ ++ D + NYV+QTA+ + P+S +L+ ++
Sbjct: 721 RTADNQCRAALIEEMLVPS-ELEKMLRDSFANYVVQTAM-DFADPDS---RNKLIDAIRP 775
Query: 399 NLDSLR-FGYGKHVYNFIKDCDLQ 421
L ++R +G+ + I + Q
Sbjct: 776 ILPAIRQTPHGRRITGKIMSAENQ 799
>gi|358414521|ref|XP_003582858.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070244|ref|XP_002691562.2| PREDICTED: pumilio homolog 2 isoform 1 [Bos taurus]
Length = 1007
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 674 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 733
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 734 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 788
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 789 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 846
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 847 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 906
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 907 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 962
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 963 HKIRPHISTLRKYTYGKHILAKLEKYYLKN 992
>gi|432096853|gb|ELK27431.1| Pumilio like protein 2 [Myotis davidii]
Length = 959
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 626 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 685
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 686 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 740
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 741 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 798
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 799 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 858
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYVIQ +I+ P + ++
Sbjct: 859 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVIQK-MIDMAEPAQRKI---IM 914
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 915 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 944
>gi|146086139|ref|XP_001465465.1| putative pumillio protein 3 [Leishmania infantum JPCM5]
gi|134069563|emb|CAM67886.1| putative pumillio protein 3 [Leishmania infantum JPCM5]
Length = 554
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 145/278 (52%), Gaps = 12/278 (4%)
Query: 104 AQDEQGSQYLQEKL-TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
A+D+ G +YLQ L T+ D+ L + + + +++ +QYA F+ K + +D
Sbjct: 206 AKDQHGCRYLQRWLDTNCDTEALQVMMDEIIPHVGELMTDQYANFLIQKLFDIMPDDARY 265
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ + S+ G+ S++K+++ ++ R + ++ +AL + L+ G
Sbjct: 266 KVAVVAAPH---ICMISLTPHGTFSVQKMIETISTREEM-KIICEALAKDVVRLVKDAHG 321
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ + L++ + ++K ++IY+A C+ +A ++QGC + + E PR+K L +
Sbjct: 322 NHVIQKVLQR-FDFDDK-EYIYRAVATDCVSIAKNKQGCCVLQRCL-EHASPRQKAAL-V 377
Query: 283 ISVNAASLS--RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
V A L ++ GNYV+Q+VLE D + +TI + H + LS+ K S V++ L
Sbjct: 378 DQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIALAFLPHLVQLSMNKFSSNVMEKVL 437
Query: 341 K-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ V + E + N + I + D YGNYV+QTAL
Sbjct: 438 RGASRPVQVMYMEEMCNPEIISHLIQDDYGNYVLQTAL 475
>gi|340373711|ref|XP_003385383.1| PREDICTED: pumilio homolog 2-like [Amphimedon queenslandica]
Length = 459
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 182/428 (42%), Gaps = 48/428 (11%)
Query: 10 SETQLNNLSLSF-ENLQVNDPSYSSFNEIHPSPPVPLYPQSTWA---------------V 53
S T L++ S S ++L + PSYSSF+ P P P ST +
Sbjct: 41 SPTSLSSFSYSPPQSLSWDIPSYSSFDLTSKHSPPPPLPGSTGSSPPRRAGAGGPGGQRR 100
Query: 54 PSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYL 113
SL L N + TI ++ Q ++ A+D+ GS+++
Sbjct: 101 KSLGDGKRCQLLEDFRNGRVTTIDLADVQ---------------GHVVDFAKDQHGSRFI 145
Query: 114 QEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQ 173
Q+KL D VF+ + ++ +I + + +V KF E DQ + T D+
Sbjct: 146 QQKLEQCSDEDKDMVFSEILPASYSLITDVFGNYVIQKFFEFGTIDQ------KATLVDR 199
Query: 174 LFVQASVDKFGSSSIRKLMKAVANRPPLLDL-VMKALKRLFRLLMMTKPGSSVVLQCLEQ 232
L + R + KA+ + PP L ++ L + + G+ V+ +C+E
Sbjct: 200 LHGHVPSLSLHTYGCRVIQKAIESVPPYLQAEIINELDGFVLKSIRDQNGNHVIQKCIEC 259
Query: 233 IYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSR 292
+ FI + +A H GC + ++ + +L I ++A L
Sbjct: 260 V--DPPLLTFIIVSFKGQVYDMATHPYGCRVIQRILEHCTAQQTDLLLKEIHLHADQLIA 317
Query: 293 NFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIV 350
+ GNYVVQHVLE P I +RG + LS K S VV+ C+ + R ++
Sbjct: 318 DNYGNYVVQHVLEKGRPEQKSRIIGVIRGRVVSLSQHKFASNVVEKCIVHASRHERAGLI 377
Query: 351 EEFLLNSD-QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYG 408
+E + I + D++ NYV+Q +++ P+ + L+ +L+ +L +LR F Y
Sbjct: 378 DELCSAPEGAILTMTKDQFANYVVQ-KMLDIAEPSQRKM---LIYRLRPHLPTLRKFTYA 433
Query: 409 KHVYNFIK 416
KH+ N I+
Sbjct: 434 KHIVNKIE 441
>gi|383417009|gb|AFH31718.1| pumilio homolog 2 [Macaca mulatta]
Length = 1059
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 726 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 785
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 786 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 840
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 841 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 898
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 899 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 958
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 959 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1014
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1015 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1044
>gi|358414517|ref|XP_003582857.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070234|ref|XP_003586698.1| PREDICTED: pumilio homolog 2 isoform 2 [Bos taurus]
Length = 1063
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 789
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 790 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 844
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 845 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 902
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 903 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 962
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 963 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1018
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1019 HKIRPHISTLRKYTYGKHILAKLEKYYLKN 1048
>gi|355714563|gb|AES05045.1| pumilio-like protein 2 [Mustela putorius furo]
Length = 600
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 267 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 326
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 327 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 381
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 382 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 439
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 440 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 499
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 500 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 555
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 556 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 585
>gi|350582684|ref|XP_003481332.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 1004
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 671 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 730
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 731 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 785
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 786 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 843
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 844 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 903
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 904 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 959
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 960 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 989
>gi|410955768|ref|XP_003984522.1| PREDICTED: pumilio homolog 2 isoform 3 [Felis catus]
Length = 1007
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 674 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 733
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 734 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 788
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 789 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 846
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 847 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 906
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 907 VTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 962
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 963 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 992
>gi|383417007|gb|AFH31717.1| pumilio homolog 2 [Macaca mulatta]
Length = 1060
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 727 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 786
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 787 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 841
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 842 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 899
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 900 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 959
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 960 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1015
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1016 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1045
>gi|255733004|ref|XP_002551425.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131166|gb|EER30727.1| predicted protein [Candida tropicalis MYA-3404]
Length = 675
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 141/278 (50%), Gaps = 11/278 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
IL L +D+ G ++LQ +L + D +FN + +++ + + ++ K E N D
Sbjct: 373 ILSLCKDQHGCRFLQRELY--NETNTDLIFNEICPKISELMIDPFGNYLVQKLFEMVNSD 430
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L I ++ TS + L + S+D G+ + +KL+ + + ++ K + L+ +
Sbjct: 431 QRL-ILIKNTSSELLRI--SLDPHGTRAFQKLIDVIETEEEINIIIDKVSPHVVTLIYDS 487
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ ++ + + ++ + Y+ ++ +ACH GC + +D +RKQ+
Sbjct: 488 N-GNHLIQKIITKLAP-----EIFYEIICDNLFSIACHRHGCCVLQKCLDHGSESQRKQL 541
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
IS LS + GNYV+Q++L+ D I+T+ ++ + I+L K GS +++
Sbjct: 542 SLEISKYTFELSLDPFGNYVIQYILKKGDKESIDTLLEKIKFNLINLCTNKFGSNIIECL 601
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
L+ I ++ + SD+ +++ D +GNYVIQT+L
Sbjct: 602 LRIPILSTELINCLIEKSDEFYKMVNDPFGNYVIQTSL 639
>gi|385252070|pdb|4DZS|A Chain A, Crystal Structure Of Yeast Puf4p Rna Binding Domain In
Complex With Ho-4be Mutant Rna
gi|385252071|pdb|4DZS|B Chain B, Crystal Structure Of Yeast Puf4p Rna Binding Domain In
Complex With Ho-4be Mutant Rna
Length = 357
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 40 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 97
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 98 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTDEEA-QIVVDSLRPYTVQLSKDLNG 155
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 156 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDK 213
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 214 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 273
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 274 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYKRL 328
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 99/220 (45%), Gaps = 10/220 (4%)
Query: 181 DKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKN 240
D+ G ++K + + ++ D + + K LM G+ ++ + LE++ +
Sbjct: 43 DQHGCRFLQKQLDILGSKAA--DAIFEETKDYTVELMTDSFGNYLIQKLLEEVT--TEQR 98
Query: 241 DFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGNYV 299
+ + + H + ++ + G + I+ +K QI+ + LS++ +GN+V
Sbjct: 99 IVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHV 158
Query: 300 VQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVEEFLLNS 357
+Q L+ P + I ++ ID++ + G V+Q CL + T + + ++ L
Sbjct: 159 IQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALV 218
Query: 358 DQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
D ++ D +GNYV+Q + + N ++V L+
Sbjct: 219 D---KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLK 255
>gi|426223188|ref|XP_004005759.1| PREDICTED: pumilio homolog 2 isoform 2 [Ovis aries]
Length = 1007
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 674 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 733
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 734 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 788
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 789 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 846
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 847 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 906
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 907 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 962
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 963 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 992
>gi|426223186|ref|XP_004005758.1| PREDICTED: pumilio homolog 2 isoform 1 [Ovis aries]
Length = 1063
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 789
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 790 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 844
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 845 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 902
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 903 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 962
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 963 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1018
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1019 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1048
>gi|301758394|ref|XP_002915042.1| PREDICTED: pumilio homolog 2-like [Ailuropoda melanoleuca]
Length = 1064
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 845
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 846 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 903
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 904 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 963
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 964 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1019
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1020 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1049
>gi|149727740|ref|XP_001503365.1| PREDICTED: pumilio homolog 2 [Equus caballus]
Length = 1063
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 789
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 790 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 844
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 845 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 902
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 903 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 962
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 963 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1018
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1019 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1048
>gi|332253819|ref|XP_003276029.1| PREDICTED: pumilio homolog 2 isoform 2 [Nomascus leucogenys]
Length = 1009
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 676 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 735
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 736 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 790
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 791 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 848
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 849 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 908
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 909 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 964
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 965 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 994
>gi|403288165|ref|XP_003935283.1| PREDICTED: pumilio homolog 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1066
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 733 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 792
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 793 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 847
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 848 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 905
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 906 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 965
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 966 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1021
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1022 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1051
>gi|332253817|ref|XP_003276028.1| PREDICTED: pumilio homolog 2 isoform 1 [Nomascus leucogenys]
Length = 1065
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 846
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 847 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 904
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 905 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 964
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 965 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1020
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1021 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1050
>gi|296224411|ref|XP_002758049.1| PREDICTED: pumilio homolog 2 isoform 2 [Callithrix jacchus]
Length = 1064
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 845
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 846 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 903
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 904 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 963
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 964 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1019
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1020 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1049
>gi|73979795|ref|XP_849088.1| PREDICTED: pumilio homolog 2 isoform 1 [Canis lupus familiaris]
Length = 1063
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 789
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 790 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 844
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 845 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 902
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 903 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 962
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 963 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1018
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1019 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1048
>gi|344280367|ref|XP_003411955.1| PREDICTED: pumilio homolog 2 [Loxodonta africana]
Length = 1067
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 734 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 793
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 794 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 848
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 849 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 906
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 907 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 966
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 967 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1022
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1023 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1052
>gi|410955766|ref|XP_003984521.1| PREDICTED: pumilio homolog 2 isoform 2 [Felis catus]
Length = 1063
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 789
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 790 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 844
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 845 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 902
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 903 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 962
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 963 VTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1018
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1019 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1048
>gi|380811084|gb|AFE77417.1| pumilio homolog 2 [Macaca mulatta]
gi|383417013|gb|AFH31720.1| pumilio homolog 2 [Macaca mulatta]
gi|384946088|gb|AFI36649.1| pumilio homolog 2 [Macaca mulatta]
Length = 1065
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 846
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 847 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 904
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 905 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 964
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 965 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1020
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1021 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1050
>gi|358414519|ref|XP_869549.5| PREDICTED: pumilio homolog 2 isoform 7 [Bos taurus]
gi|359070241|ref|XP_003586699.1| PREDICTED: pumilio homolog 2 isoform 3 [Bos taurus]
Length = 984
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 651 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 710
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 711 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 765
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 766 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 823
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 824 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 883
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 884 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 939
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 940 HKIRPHISTLRKYTYGKHILAKLEKYYLKN 969
>gi|350582680|ref|XP_003125422.3| PREDICTED: pumilio homolog 2 isoform 1 [Sus scrofa]
Length = 1060
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 727 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 786
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 787 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 841
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 842 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 899
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 900 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 959
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 960 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1015
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1016 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1045
>gi|169791860|pdb|3BX2|A Chain A, Puf4 Rna Binding Domain Bound To Ho Endonuclease Rna 3'
Utr Recognition Sequence
gi|169791861|pdb|3BX2|B Chain B, Puf4 Rna Binding Domain Bound To Ho Endonuclease Rna 3'
Utr Recognition Sequence
Length = 335
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 18 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 75
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 76 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTDEEA-QIVVDSLRPYTVQLSKDLNG 133
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 134 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDK 191
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 192 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 251
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 252 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYKRL 306
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 99/220 (45%), Gaps = 10/220 (4%)
Query: 181 DKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKN 240
D+ G ++K + + ++ D + + K LM G+ ++ + LE++ +
Sbjct: 21 DQHGCRFLQKQLDILGSKAA--DAIFEETKDYTVELMTDSFGNYLIQKLLEEVT--TEQR 76
Query: 241 DFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGNYV 299
+ + + H + ++ + G + I+ +K QI+ + LS++ +GN+V
Sbjct: 77 IVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHV 136
Query: 300 VQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVEEFLLNS 357
+Q L+ P + I ++ ID++ + G V+Q CL + T + + ++ L
Sbjct: 137 IQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALV 196
Query: 358 DQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
D ++ D +GNYV+Q + + N ++V L+
Sbjct: 197 D---KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLK 233
>gi|403288169|ref|XP_003935285.1| PREDICTED: pumilio homolog 2 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1010
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 677 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 736
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 737 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 791
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 792 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 849
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 850 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 909
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 910 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 965
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 966 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 995
>gi|291238122|ref|XP_002738980.1| PREDICTED: pumilio homolog 2-like [Saccoglossus kowalevskii]
Length = 643
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 156/334 (46%), Gaps = 25/334 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + ++ + + +V KF E D
Sbjct: 311 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILGSAYNLMTDVFGNYVIQKFFEFGTPD 370
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDL-VMKALKRLFRLLMM 218
Q + + ++ + ++ +G I+K ++++ PP + ++K L +
Sbjct: 371 QKMALAQRVRGH---VLPLALQMYGCRVIQKALESI---PPDQQVDIVKELDGHVLKCVK 424
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
+ G+ VV +C+E + FI A L+ H GC + ++ +
Sbjct: 425 DQNGNHVVQKCIECV--EPVALQFIIDAFRGQIFVLSTHPYGCRVIQRILEHCTVDQTIP 482
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
IL + N L ++ GNYV+QHVLE P I LRG + LS K S VV+
Sbjct: 483 ILEELHDNTERLVQDQYGNYVIQHVLEHGRPEDKSKIVAELRGKVLVLSQHKFASNVVEK 542
Query: 339 CLKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
C+ + R +++E + +D ++ + D+Y NYV+Q +I+ P + L
Sbjct: 543 CVTHASRPERALLIDEVISYNDGPHSALYTMMKDQYANYVVQK-MIDVSEPGQRRI---L 598
Query: 393 VTKLQQNLDSLR-FGYGKHVYN-----FIKDCDL 420
+ K++ ++ +LR F YGKH+ ++K+ DL
Sbjct: 599 MQKIRPHIATLRKFTYGKHILAKLEKYYLKNSDL 632
>gi|194385402|dbj|BAG65078.1| unnamed protein product [Homo sapiens]
Length = 1008
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 675 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 734
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 735 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 789
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 790 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 847
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 848 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 907
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 908 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 963
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 964 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 993
>gi|332812701|ref|XP_003308953.1| PREDICTED: pumilio homolog 2 [Pan troglodytes]
gi|397513517|ref|XP_003827059.1| PREDICTED: pumilio homolog 2 isoform 2 [Pan paniscus]
gi|426334845|ref|XP_004028947.1| PREDICTED: pumilio homolog 2 isoform 3 [Gorilla gorilla gorilla]
Length = 1009
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 676 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 735
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 736 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 790
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 791 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 848
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 849 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 908
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 909 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 964
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 965 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 994
>gi|13491168|ref|NP_056132.1| pumilio homolog 2 [Homo sapiens]
gi|11139704|gb|AAG31806.1|AF315591_1 Pumilio 2 [Homo sapiens]
gi|20521854|dbj|BAA19665.3| KIAA0235 protein [Homo sapiens]
gi|62822478|gb|AAY15026.1| unknown [Homo sapiens]
gi|85566710|gb|AAI12047.1| Pumilio homolog 2 (Drosophila) [Homo sapiens]
gi|85567007|gb|AAI12049.1| Pumilio homolog 2 [Homo sapiens]
gi|119621226|gb|EAX00821.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|119621228|gb|EAX00823.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|168267226|dbj|BAG09669.1| pumilio homolog 2 [synthetic construct]
gi|193787566|dbj|BAG52772.1| unnamed protein product [Homo sapiens]
Length = 1064
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 845
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 846 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 903
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 904 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 963
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 964 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1019
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1020 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1049
>gi|114576339|ref|XP_001140678.1| PREDICTED: pumilio homolog 2 isoform 10 [Pan troglodytes]
gi|397513515|ref|XP_003827058.1| PREDICTED: pumilio homolog 2 isoform 1 [Pan paniscus]
gi|426334841|ref|XP_004028945.1| PREDICTED: pumilio homolog 2 isoform 1 [Gorilla gorilla gorilla]
gi|410258976|gb|JAA17454.1| pumilio homolog 2 [Pan troglodytes]
gi|410298912|gb|JAA28056.1| pumilio homolog 2 [Pan troglodytes]
gi|410335699|gb|JAA36796.1| pumilio homolog 2 [Pan troglodytes]
Length = 1065
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 846
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 847 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 904
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 905 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 964
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 965 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1020
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1021 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1050
>gi|402890199|ref|XP_003908378.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2 [Papio anubis]
Length = 984
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 651 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 710
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 711 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 765
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 766 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 823
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 824 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 883
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 884 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 939
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 940 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 969
>gi|297668111|ref|XP_002812298.1| PREDICTED: pumilio homolog 2 isoform 3 [Pongo abelii]
Length = 1009
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 676 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 735
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 736 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 790
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 791 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 848
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 849 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 908
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 909 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 964
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 965 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 994
>gi|169791859|pdb|3BWT|A Chain A, Crystal Structure Of The Rna Binding Domain Of Puf4 From
Saccharomyces Cerevisiae
Length = 333
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 18 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 75
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 76 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTDEEA-QIVVDSLRPYTVQLSKDLNG 133
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 134 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDK 191
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 192 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 251
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 252 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYKRL 306
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 99/220 (45%), Gaps = 10/220 (4%)
Query: 181 DKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKN 240
D+ G ++K + + ++ D + + K LM G+ ++ + LE++ +
Sbjct: 21 DQHGCRFLQKQLDILGSKAA--DAIFEETKDYTVELMTDSFGNYLIQKLLEEVT--TEQR 76
Query: 241 DFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGNYV 299
+ + + H + ++ + G + I+ +K QI+ + LS++ +GN+V
Sbjct: 77 IVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHV 136
Query: 300 VQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVEEFLLNS 357
+Q L+ P + I ++ ID++ + G V+Q CL + T + + ++ L
Sbjct: 137 IQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALV 196
Query: 358 DQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
D ++ D +GNYV+Q + + N ++V L+
Sbjct: 197 D---KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLK 233
>gi|256090643|ref|XP_002581293.1| pumilio [Schistosoma mansoni]
gi|353230662|emb|CCD77079.1| putative pumilio [Schistosoma mansoni]
Length = 1534
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 155/327 (47%), Gaps = 24/327 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ AQD+ GS+++Q+KL VF + + ++ + + +V KF E +
Sbjct: 969 IVEFAQDQYGSRFIQQKLEQASVVDKTSVFREILPHAYNLMIDVFGNYVIQKFFELGTPE 1028
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + +I Q + S+ +G I+K +++V L++ + +K L ++
Sbjct: 1029 QKQILAQRIRGQ---VLSLSLQMYGCRVIQKAVESVP-----LEMQISIVKELDGCVIKC 1080
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ VV +C+E + + + FI A +H ++ H GC + ++ +
Sbjct: 1081 VKDQNGNHVVQKCVENVPPEHLQ--FIVDAFKDHVYSISTHSYGCRVIQRILEHCTPEQT 1138
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL + + +L ++ GNYV+QHVLE I ++G LS+ K S VV
Sbjct: 1139 TPILSELHQHTDALVKDQYGNYVIQHVLEHGKTEDKSRIVEHIKGRVAKLSVHKFASNVV 1198
Query: 337 QNC------LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ ++ + +N I+EE + S + + D++ NYVIQ L +P + +
Sbjct: 1199 EKAVANASRVERQSLINEILEETVTRSSVLVMMMKDQFANYVIQKMLDVAEQP----IRK 1254
Query: 391 RLVTKLQQNLDSLR-FGYGKHVYNFIK 416
L+ +++ +L LR + YGKH+ N ++
Sbjct: 1255 ELMIQIRPHLGILRKYTYGKHIINKME 1281
>gi|207345268|gb|EDZ72145.1| YGL014Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 349
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 32 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 89
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 90 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTDEEA-QIVVDSLRPYTVQLSKDLNG 147
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 148 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDK 205
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 206 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 265
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 266 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYRRL 320
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 99/220 (45%), Gaps = 10/220 (4%)
Query: 181 DKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKN 240
D+ G ++K + + ++ D + + K LM G+ ++ + LE++ +
Sbjct: 35 DQHGCRFLQKQLDILGSKAA--DAIFEETKDYTVELMTDSFGNYLIQKLLEEVT--TEQR 90
Query: 241 DFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGNYV 299
+ + + H + ++ + G + I+ +K QI+ + LS++ +GN+V
Sbjct: 91 IVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHV 150
Query: 300 VQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVEEFLLNS 357
+Q L+ P + I ++ ID++ + G V+Q CL + T + + ++ L
Sbjct: 151 IQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALV 210
Query: 358 DQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
D ++ D +GNYV+Q + + N ++V L+
Sbjct: 211 D---KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLK 247
>gi|297668109|ref|XP_002812297.1| PREDICTED: pumilio homolog 2 isoform 2 [Pongo abelii]
Length = 1065
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 846
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 847 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 904
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 905 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 964
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 965 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1020
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1021 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1050
>gi|426334843|ref|XP_004028946.1| PREDICTED: pumilio homolog 2 isoform 2 [Gorilla gorilla gorilla]
Length = 986
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 653 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 712
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 713 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 767
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 768 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 825
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 826 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 885
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 886 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 941
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 942 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 971
>gi|403288167|ref|XP_003935284.1| PREDICTED: pumilio homolog 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 987
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 654 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 713
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 714 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 768
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 769 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 826
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 827 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 886
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 887 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 942
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 943 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 972
>gi|256090645|ref|XP_002581294.1| pumilio [Schistosoma mansoni]
gi|353230661|emb|CCD77078.1| putative pumilio [Schistosoma mansoni]
Length = 1537
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 155/327 (47%), Gaps = 24/327 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ AQD+ GS+++Q+KL VF + + ++ + + +V KF E +
Sbjct: 972 IVEFAQDQYGSRFIQQKLEQASVVDKTSVFREILPHAYNLMIDVFGNYVIQKFFELGTPE 1031
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + +I Q + S+ +G I+K +++V L++ + +K L ++
Sbjct: 1032 QKQILAQRIRGQ---VLSLSLQMYGCRVIQKAVESVP-----LEMQISIVKELDGCVIKC 1083
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ VV +C+E + + + FI A +H ++ H GC + ++ +
Sbjct: 1084 VKDQNGNHVVQKCVENVPPEHLQ--FIVDAFKDHVYSISTHSYGCRVIQRILEHCTPEQT 1141
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL + + +L ++ GNYV+QHVLE I ++G LS+ K S VV
Sbjct: 1142 TPILSELHQHTDALVKDQYGNYVIQHVLEHGKTEDKSRIVEHIKGRVAKLSVHKFASNVV 1201
Query: 337 QNC------LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ ++ + +N I+EE + S + + D++ NYVIQ L +P + +
Sbjct: 1202 EKAVANASRVERQSLINEILEETVTRSSVLVMMMKDQFANYVIQKMLDVAEQP----IRK 1257
Query: 391 RLVTKLQQNLDSLR-FGYGKHVYNFIK 416
L+ +++ +L LR + YGKH+ N ++
Sbjct: 1258 ELMIQIRPHLGILRKYTYGKHIINKME 1284
>gi|73979803|ref|XP_858023.1| PREDICTED: pumilio homolog 2 isoform 5 [Canis lupus familiaris]
Length = 984
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 651 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 710
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 711 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 765
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 766 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 823
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 824 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 883
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 884 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 939
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 940 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 969
>gi|417405515|gb|JAA49467.1| Putative rna-binding protein of the puf family [Desmodus rotundus]
Length = 985
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 652 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 711
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 712 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 766
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + +
Sbjct: 767 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPV 824
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 825 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 884
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYVIQ +I+ P + ++
Sbjct: 885 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVIQK-MIDMAEPAQRKI---IM 940
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 941 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 970
>gi|119621227|gb|EAX00822.1| pumilio homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
gi|219517887|gb|AAI43551.1| PUM2 protein [Homo sapiens]
Length = 985
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 652 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 711
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 712 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 766
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 767 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 824
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 825 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 884
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 885 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 940
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 941 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 970
>gi|17224452|gb|AAL36981.1|AF272350_1 translational repressor pumilio [Homo sapiens]
Length = 876
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 543 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 602
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 603 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 657
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 658 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 715
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 716 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 775
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 776 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 831
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 832 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 861
>gi|237649083|ref|NP_001153692.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|237649085|ref|NP_001153693.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|74200874|dbj|BAE24797.1| unnamed protein product [Mus musculus]
Length = 1064
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 845
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 846 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 903
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 904 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 963
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 964 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1019
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1020 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1049
>gi|410955764|ref|XP_003984520.1| PREDICTED: pumilio homolog 2 isoform 1 [Felis catus]
Length = 984
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 651 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 710
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 711 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 765
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 766 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 823
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 824 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 883
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 884 VTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 939
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 940 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 969
>gi|350582682|ref|XP_003481331.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 981
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 648 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 707
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 708 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 762
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 763 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 820
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 821 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 880
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 881 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 936
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 937 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 966
>gi|157818169|ref|NP_001100185.1| pumilio homolog 2 [Rattus norvegicus]
gi|149050904|gb|EDM03077.1| pumilio 2 (Drosophila) [Rattus norvegicus]
Length = 1061
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 728 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEIVQAAYQLMTDVFGNYVIQKFFEFGSLD 787
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 788 QKLALANRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 842
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 843 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 900
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 901 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 960
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 961 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1016
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1017 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1046
>gi|327261367|ref|XP_003215502.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Anolis
carolinensis]
Length = 1180
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 159/330 (48%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ ++D+ GS+++Q+KL VF+ + + +Q++ + + +V KF E + D
Sbjct: 847 IVEFSRDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKFFEFGSID 906
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K +++++ P + ++K L +
Sbjct: 907 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 961
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 962 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 1019
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 1020 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVTEIRGKVLTLSQHKFASNVVEKC 1079
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1080 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1135
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1136 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1165
>gi|237649087|ref|NP_001153694.1| pumilio homolog 2 isoform 3 [Mus musculus]
gi|27692665|gb|AAH41773.1| Pum2 protein [Mus musculus]
Length = 985
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 652 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 711
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 712 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 766
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 767 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 824
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 825 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 884
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 885 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 940
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 941 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 970
>gi|74208592|dbj|BAE37556.1| unnamed protein product [Mus musculus]
Length = 980
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 647 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 706
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 707 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 761
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 762 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 819
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 820 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 879
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 880 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 935
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 936 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 965
>gi|28972107|dbj|BAC65507.1| mKIAA0235 protein [Mus musculus]
Length = 969
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 636 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 695
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 696 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 750
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 751 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 808
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 809 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 868
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 869 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 924
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 925 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 954
>gi|224113073|ref|XP_002316382.1| predicted protein [Populus trichocarpa]
gi|222865422|gb|EEF02553.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 164/328 (50%), Gaps = 26/328 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +K+F + ++ + + +V KF++ E
Sbjct: 675 VVEFSTDQYGSRFIQQKLETASVEEKNKIFPEIIPHARTLMTDVFGNYVIQKFLDHGTES 734
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAV-ANRPP--LLDLVMKALKRLFRLL 216
Q L + ++T + S+ +G I+K ++ + +R +++L +K
Sbjct: 735 QRLELVSRLTGN---VLPLSLQMYGCRVIQKALEMIDVDRQTQIVVELDGSVIK-----C 786
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ + G+ V+ +C+E + ++ FI A L L+ H GC + ++ K
Sbjct: 787 IRDQNGNHVIQKCIECVPE--DRIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCKDMNT 844
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + +L+++ GNYV+QHVLE P I L GH + +S K S V
Sbjct: 845 QQIIMDEIMQSVYTLAQDQYGNYVIQHVLEHGKPQERSAIISKLAGHIVLMSQQKFASNV 904
Query: 336 VQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
V+ CL + ++ VN I+ + N + + + D +GNYV+Q L ET SL L
Sbjct: 905 VEKCLTFGGPEERQLLVNEILGSTVEN-EPLQAMMKDPFGNYVVQKVL-ETCNDRSLEL- 961
Query: 390 QRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
++++++ +L +L R+ YGKH+ + ++
Sbjct: 962 --IISRIRVHLSALKRYTYGKHIVSRVE 987
>gi|8394|emb|CAA44474.1| pumilio [Drosophila melanogaster]
Length = 1533
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 151/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 1116 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 1175
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 1176 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 1230
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 1231 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 1288
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 1289 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1348
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 1349 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 1404
Query: 397 QQNLDSLR-FGYGKHV 411
++N+ +LR + YGKH+
Sbjct: 1405 RKNMAALRKYTYGKHI 1420
>gi|74148485|dbj|BAE36346.1| unnamed protein product [Mus musculus]
Length = 534
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 201 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 260
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 261 QKLALATRIRGH---VLPLALQMYGYRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 315
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 316 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 373
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 374 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 433
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 434 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 489
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 490 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 519
>gi|356533951|ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 983
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 160/326 (49%), Gaps = 22/326 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + K+F + ++ + + +V KF E E
Sbjct: 657 VVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTES 716
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALKRLFRLLM 217
Q + Q+T + S+ +G I+K ++ V + ++ + A+ + R
Sbjct: 717 QRKELANQLTGH---VLPLSLQMYGCRVIQKALEVVDVDQQGQMVSELNGAIMKCVR--- 770
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +C+E + +K FI + + L+ H GC + ++ +
Sbjct: 771 -DQNGNHVIQKCIECVPQ--DKIQFIVSSFYGQVVALSTHPYGCRVIQRVLEHCDDQNTQ 827
Query: 278 QILYL-ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
QI+ I + ++L+++ GNYV+QH++E P+ TI L G + +S K S V+
Sbjct: 828 QIIMEEIMQSVSTLAQDQYGNYVIQHIVEHGKPHERTTIISKLAGQIVKMSQQKFASNVI 887
Query: 337 QNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQR 391
+ CL + +V E L SD+ + + D +GNYV+Q L ET SL L
Sbjct: 888 EKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVL-ETCDDRSLEL--- 943
Query: 392 LVTKLQQNLDSL-RFGYGKHVYNFIK 416
++++++ +L++L R+ YGKH+ + ++
Sbjct: 944 ILSRIKVHLNALKRYTYGKHIVSRVE 969
>gi|354472361|ref|XP_003498408.1| PREDICTED: pumilio homolog 1 isoform 2 [Cricetulus griseus]
Length = 1091
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 756 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 815
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 816 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 872
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 873 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 930
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 931 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 990
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 991 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1046
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1047 HKIRPHIATLRKYTYGKHI 1065
>gi|351699059|gb|EHB01978.1| Pumilio-like protein 1 [Heterocephalus glaber]
Length = 1091
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 756 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 815
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 816 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 872
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 873 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCLPDQTLPI 930
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 931 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 990
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 991 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1046
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1047 HKIRPHIATLRKYTYGKHI 1065
>gi|169791866|pdb|3BX3|A Chain A, Puf4 T650cC724R MUTANT BOUND TO COX17 RNA 3' UTR
Recognition Sequence
gi|169791867|pdb|3BX3|B Chain B, Puf4 T650cC724R MUTANT BOUND TO COX17 RNA 3' UTR
Recognition Sequence
Length = 335
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 148/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 18 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 75
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G +++KL++ + +V+ +L+ L G
Sbjct: 76 RIVLTKISSPH-FVEISLNPHGCRALQKLIECIKTDEEA-QIVVDSLRPYTVQLSKDLNG 133
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 134 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCRVLQRCLDHGTTEQCDNLCDK 191
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 192 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 251
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 252 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYKRL 306
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 100/220 (45%), Gaps = 10/220 (4%)
Query: 181 DKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKN 240
D+ G ++K + + ++ D + + K LM G+ ++ + LE++ +
Sbjct: 21 DQHGCRFLQKQLDILGSKAA--DAIFEETKDYTVELMTDSFGNYLIQKLLEEVT--TEQR 76
Query: 241 DFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGNYV 299
+ + + H + ++ + GC + I+ +K QI+ + LS++ +GN+V
Sbjct: 77 IVLTKISSPHFVEISLNPHGCRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHV 136
Query: 300 VQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVEEFLLNS 357
+Q L+ P + I ++ ID++ + G V+Q CL + T + + ++ L
Sbjct: 137 IQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCRVLQRCLDHGTTEQCDNLCDKLLALV 196
Query: 358 DQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
D ++ D +GNYV+Q + + N ++V L+
Sbjct: 197 D---KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLK 233
>gi|326676804|ref|XP_002665632.2| PREDICTED: pumilio homolog 1 [Danio rerio]
Length = 1152
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 158/330 (47%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + D
Sbjct: 817 VMEFSQDQHGSRFIQLKLERASPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLD 876
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 877 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 933
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + H + FI A L+ H GC + ++ + I
Sbjct: 934 QNGNHVVQKCIECVQPHALQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLSI 991
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I + L ++ GNYV+QHVLE I +RG+ + LS K S VV+ C
Sbjct: 992 LEEIHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVSEIRGNVLGLSQHKFASNVVEKC 1051
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1052 VTHSLRAERAMLIDEVCSMADGPHSALYTMMKDQYANYVVQK-MIDVAEPTQRKI---VM 1107
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 1108 HKIRPHIATLRKYTYGKHILAKLEKYYMKN 1137
>gi|296086206|emb|CBI31647.3| unnamed protein product [Vitis vinifera]
Length = 874
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 157/319 (49%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E
Sbjct: 544 VVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTAS 603
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q+ + Q+T + S+ +G I+K ++ V + +VM+ + R +
Sbjct: 604 QIRELADQLTGH---VLTLSLQMYGCRVIQKAIEVV-DLDQQTKMVMELDGNVMRCVR-D 658
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ +C+E I + FI + + L+ H GC + ++ P+ ++I
Sbjct: 659 QNGNHVIQKCIECIPQ--DSIQFIISTFYDQVVTLSTHPYGCRVIQRVLEHCHDPKTQRI 716
Query: 280 LY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ I + L+++ GNYVVQHVLE P+ +I L G + +S K S VV+
Sbjct: 717 MMDEILQSVRMLAQDQYGNYVVQHVLEHGKPHERSSIINELAGQIVQMSQQKFASNVVEK 776
Query: 339 CLKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
CL + +V E L ++D+ + + D++ NYV+Q L ET L L ++
Sbjct: 777 CLTFGAPSERQILVNEMLGSTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQLEL---IL 832
Query: 394 TKLQQNLDSL-RFGYGKHV 411
+++ +L++L ++ YGKH+
Sbjct: 833 NRIKVHLNALKKYTYGKHI 851
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ + + + I A SL + GNYV+Q E
Sbjct: 543 HVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTA 602
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
I + L GH + LSL G V+Q ++ + ++ + + + R D+ G
Sbjct: 603 SQIRELADQLTGHVLTLSLQMYGCRVIQKAIEV-VDLDQQTKMVMELDGNVMRCVRDQNG 661
Query: 370 NYVIQTAL 377
N+VIQ +
Sbjct: 662 NHVIQKCI 669
>gi|227430386|ref|NP_001153077.1| pumilio homolog 1 isoform 4 [Mus musculus]
gi|74145600|dbj|BAE36209.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 757 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 816
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 817 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 873
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 874 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 931
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 932 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 991
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 992 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1047
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1048 HKIRPHIATLRKYTYGKHI 1066
>gi|224097831|ref|XP_002311080.1| predicted protein [Populus trichocarpa]
gi|222850900|gb|EEE88447.1| predicted protein [Populus trichocarpa]
Length = 999
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 160/327 (48%), Gaps = 24/327 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +K+F + ++ + + +V KF++ E
Sbjct: 676 VVEFSTDQYGSRFIQQKLETASVEETNKIFPEIIPHALTLMTDVFGNYVIQKFLDQGTES 735
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + + Q+T + S+ +G I+K ++ + +D + + L +M
Sbjct: 736 QRIELASQLTGH---VLPLSLQMYGCRVIQKALEVID-----VDRQTQMVAELDGSVMKC 787
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + ++ FI A + L+ H GC + ++ K
Sbjct: 788 IRDQNGNHVIQKCIECV--PGDRIQFITSAFYGQVVALSTHPYGCRVIQRVLEHCKDMNT 845
Query: 277 KQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+Q I+ I + +L+++ GNYV+QHVLE P I L G + +S K S V
Sbjct: 846 QQVIMDEIMQSVCALAQDQYGNYVIQHVLEHGKPQQRSVIIRKLAGQIVLMSQQKFASNV 905
Query: 336 VQNCLKYR--ITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L ++D+ + + D +GNYV+Q L ET SL L
Sbjct: 906 VEKCLTFGGPDERQLLVNEMLGSTDENEPLQAMMKDPFGNYVVQKVL-ETCDDRSLEL-- 962
Query: 391 RLVTKLQQNLDSL-RFGYGKHVYNFIK 416
++++++ +L +L R+ YGKH+ + ++
Sbjct: 963 -ILSRIRIHLSALKRYTYGKHIVSRVE 988
>gi|348571014|ref|XP_003471291.1| PREDICTED: pumilio homolog 1-like isoform 2 [Cavia porcellus]
Length = 1092
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 757 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 816
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 817 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 873
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 874 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 931
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 932 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 991
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 992 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1047
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1048 HKIRPHIATLRKYTYGKHI 1066
>gi|22327539|ref|NP_199125.2| pumilio 14 [Arabidopsis thaliana]
gi|75339252|sp|Q4PSD1.1|PUM14_ARATH RecName: Full=Pumilio homolog 14; Short=APUM-14; Short=AtPUM14
gi|67633854|gb|AAY78851.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332007528|gb|AED94911.1| pumilio 14 [Arabidopsis thaliana]
Length = 518
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 136/283 (48%), Gaps = 19/283 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
A+D++ S+ L + G +D ++N + +++ + Y V + C+ +Q++
Sbjct: 208 FAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQIV 267
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANR-----PPLLDLVMKALKRLFRLLM 217
++ +T Q FV +D G+++I+ L+ + R P ++D+V +L +
Sbjct: 268 QLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVDVVRTVALQLSK--- 324
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR-- 275
+ V+L C H + + +++C +A + GC + ++ + P
Sbjct: 325 -SNHAIFVILACFRLFPLHCR---LLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLE 380
Query: 276 -RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
R++++ NA L N GNYVVQ+++EL + YLI+ + L G+Y L+ K GS
Sbjct: 381 IRQRLIMEAIANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSH 440
Query: 335 VVQNCLKYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA 376
VQ LK R I IV + L D + D +GNYVIQTA
Sbjct: 441 AVQKLLKLRWIDSRVIVIDLLREIDTLL---LDPFGNYVIQTA 480
>gi|227430384|ref|NP_001153076.1| pumilio homolog 1 isoform 3 [Mus musculus]
gi|29165749|gb|AAH48174.1| Pumilio 1 (Drosophila) [Mus musculus]
gi|74208613|dbj|BAE37564.1| unnamed protein product [Mus musculus]
Length = 1188
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 969
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 970 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1027
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1028 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1087
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1088 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1143
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1144 HKIRPHIATLRKYTYGKHI 1162
>gi|74206258|dbj|BAE24888.1| unnamed protein product [Mus musculus]
Length = 1189
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 913
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 914 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 970
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 971 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1028
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1029 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1088
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1089 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1144
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1145 HKIRPHIATLRKYTYGKHI 1163
>gi|227430380|ref|NP_109647.2| pumilio homolog 1 isoform 1 [Mus musculus]
gi|41688656|sp|Q80U78.2|PUM1_MOUSE RecName: Full=Pumilio homolog 1
gi|148698187|gb|EDL30134.1| pumilio 1 (Drosophila), isoform CRA_a [Mus musculus]
Length = 1189
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 913
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 914 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 970
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 971 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1028
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1029 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1088
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1089 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1144
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1145 HKIRPHIATLRKYTYGKHI 1163
>gi|157822487|ref|NP_001102154.1| pumilio homolog 1 [Rattus norvegicus]
gi|149024100|gb|EDL80597.1| pumilio 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 1189
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 913
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 914 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 970
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 971 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1028
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1029 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1088
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1089 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1144
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1145 HKIRPHIATLRKYTYGKHI 1163
>gi|11991652|gb|AAG42319.1|AF321909_1 pumilio 1 [Mus musculus]
Length = 1189
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 913
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 914 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 970
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 971 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1028
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1029 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1088
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1089 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1144
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1145 HKIRPHIATLRKYTYGKHI 1163
>gi|359486781|ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1015
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 158/321 (49%), Gaps = 22/321 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E
Sbjct: 685 VVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTAS 744
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q+ + Q+T + S+ +G I+K ++ V + +VM+ + R +
Sbjct: 745 QIRELADQLTGH---VLTLSLQMYGCRVIQKAIEVV-DLDQQTKMVMELDGNVMRCVR-D 799
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ +C+E I + FI + + L+ H GC + ++ P+ ++I
Sbjct: 800 QNGNHVIQKCIECIPQ--DSIQFIISTFYDQVVTLSTHPYGCRVIQRVLEHCHDPKTQRI 857
Query: 280 LY---LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ L SV L+++ GNYVVQHVLE P+ +I L G + +S K S VV
Sbjct: 858 MMDEILQSVRM--LAQDQYGNYVVQHVLEHGKPHERSSIINELAGQIVQMSQQKFASNVV 915
Query: 337 QNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQR 391
+ CL + +V E L ++D+ + + D++ NYV+Q L ET L L
Sbjct: 916 EKCLTFGAPSERQILVNEMLGSTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQLEL--- 971
Query: 392 LVTKLQQNLDSL-RFGYGKHV 411
++ +++ +L++L ++ YGKH+
Sbjct: 972 ILNRIKVHLNALKKYTYGKHI 992
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ + + + I A SL + GNYV+Q E
Sbjct: 684 HVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTA 743
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
I + L GH + LSL G V+Q ++ + ++ + + + R D+ G
Sbjct: 744 SQIRELADQLTGHVLTLSLQMYGCRVIQKAIEV-VDLDQQTKMVMELDGNVMRCVRDQNG 802
Query: 370 NYVIQ 374
N+VIQ
Sbjct: 803 NHVIQ 807
>gi|354479902|ref|XP_003502148.1| PREDICTED: pumilio homolog 2 isoform 1 [Cricetulus griseus]
Length = 1065
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VF+ + + +Q++ + + +V KF E + D
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 846
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 847 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 904
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 905 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 964
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 965 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1020
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1021 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1050
>gi|195396057|ref|XP_002056649.1| GJ10105 [Drosophila virilis]
gi|194143358|gb|EDW59761.1| GJ10105 [Drosophila virilis]
Length = 812
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 152/316 (48%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VFN + + ++ + + +V KF E +
Sbjct: 391 IVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKFFEFGTPE 450
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 451 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 505
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + F+ A L+ H GC + ++ + + I
Sbjct: 506 QNGNHVVQKCIECV--DPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTQPI 563
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + +L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 564 LDELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 623
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 624 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 679
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 680 RPHMAALRKYTYGKHI 695
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIR-KLMKAVANRPPLL-DLVMKALKRLFRLLMMTKPGS 223
LQ+ V+ S D+ GS I+ KL +A A ++ + ++ A L MT
Sbjct: 382 LQLRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSL-----MTDVFG 436
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLI 283
+ V+Q + KN Q H L LA GC + ++ + ++++I++ +
Sbjct: 437 NYVIQKFFEFGTPEQKNTLGMQVK-GHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL 495
Query: 284 SVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR 343
+ ++ +GN+VVQ +E DP ++ + + +G LS G V+Q L++
Sbjct: 496 DGHVLKCVKDQNGNHVVQKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHC 555
Query: 344 IT--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I++E +++ + + D+YGNYVIQ L
Sbjct: 556 TAEQTQPILDELHEHTENLIQ---DQYGNYVIQHVL 588
>gi|390179095|ref|XP_003736802.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|388859710|gb|EIM52875.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 1531
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 1107 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGTPE 1166
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 1167 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 1221
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 1222 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 1279
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + N L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 1280 LDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1339
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 1340 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 1395
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 1396 RPHMTALRKYTYGKHI 1411
>gi|390179097|ref|XP_003736803.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859711|gb|EIM52876.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1192
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 768 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGTPE 827
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 828 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 882
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 883 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 940
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + N L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 941 LDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1000
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 1001 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 1056
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 1057 RPHMTALRKYTYGKHI 1072
>gi|344252117|gb|EGW08221.1| Pumilio-like 2 [Cricetulus griseus]
Length = 1064
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VF+ + + +Q++ + + +V KF E + D
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 845
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 846 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 903
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 904 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 963
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 964 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1019
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1020 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1049
>gi|148698188|gb|EDL30135.1| pumilio 1 (Drosophila), isoform CRA_b [Mus musculus]
Length = 1212
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 877 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 936
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 937 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 993
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 994 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1051
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1052 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1111
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1112 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1167
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1168 HKIRPHIATLRKYTYGKHI 1186
>gi|354479904|ref|XP_003502149.1| PREDICTED: pumilio homolog 2 isoform 2 [Cricetulus griseus]
Length = 986
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VF+ + + +Q++ + + +V KF E + D
Sbjct: 653 IVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKFFEFGSLD 712
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 713 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 767
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 768 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 825
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 826 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 885
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 886 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 941
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 942 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 971
>gi|242089229|ref|XP_002440447.1| hypothetical protein SORBIDRAFT_09g001090 [Sorghum bicolor]
gi|241945732|gb|EES18877.1| hypothetical protein SORBIDRAFT_09g001090 [Sorghum bicolor]
Length = 878
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 157/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E +
Sbjct: 547 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTA 606
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+ + + S+ +G I+K ++ V LDL K + L +M
Sbjct: 607 QIKELAGQLIGR---VLALSLQMYGCRVIQKAIEVVD-----LDLQTKMVAELEGHVMRC 658
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E I H +FI + L+ H GC + ++ P+
Sbjct: 659 VRDQNGNHVIQKCIECIPQH--AIEFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKT 716
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 717 QQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNV 776
Query: 336 VQNCLKYR--ITVNYIVEEFLLN---SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + + ++ E L + S+ + + D++ NYV+Q L ET +
Sbjct: 777 IEKCLAFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFANYVVQKVL-ETCDDQQREM-- 833
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 834 -ILTRIKTHLNTLKKYTYGKHI 854
>gi|225463345|ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|296089553|emb|CBI39372.3| unnamed protein product [Vitis vinifera]
Length = 1017
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 152/323 (47%), Gaps = 26/323 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + VF V +++ + + +V KF E N +
Sbjct: 695 IVEFSADQHGSRFIQQKLENCSVEEKASVFKEVLPHASKLMTDVFGNYVIQKFFEHGNPE 754
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q+ Q + S+ +G I+K + + L LV + + R +
Sbjct: 755 QRKELASQLAGQ---ILPLSLQMYGCRVIQKALDVIELEQKTL-LVRELDGHVMRCVR-D 809
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ- 278
+ G+ V+ +C+E + K FI A H L+ H GC + ++ + Q
Sbjct: 810 QNGNHVIQKCIESVP--TEKIGFIISAFRSHVATLSTHPYGCRVIQRVLEHCTDELQSQF 867
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
I+ I + SL+++ GNYV QHVLE P+ I L+GH + LS K S VV+
Sbjct: 868 IVDEILESICSLAQDQYGNYVTQHVLERGKPHERSQIINKLKGHIVQLSQHKFASNVVEK 927
Query: 339 CLKYRITVN---YIVEEFLLN---SDQIFRVACDKYGNYVIQTAL---IETMRPNSLHLH 389
CL+Y VN ++EE + + +D + + D++ NYVIQ L + R
Sbjct: 928 CLEYG-DVNERGLLIEEIIGHNEGNDNLLIMMKDQFANYVIQKILDICTDNQR------- 979
Query: 390 QRLVTKLQQNLDSL-RFGYGKHV 411
+ L +++ + +L ++ YGKH+
Sbjct: 980 ESLFVRIRVHAHALKKYTYGKHI 1002
>gi|28972067|dbj|BAC65487.1| mKIAA0099 protein [Mus musculus]
Length = 1218
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 883 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 942
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 943 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 999
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 1000 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1057
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1058 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1117
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1118 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1173
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1174 HKIRPHIATLRKYTYGKHI 1192
>gi|390179099|ref|XP_002137873.2| GA30209, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859712|gb|EDY68431.2| GA30209, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 907
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 483 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGTPE 542
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 543 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 597
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 598 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 655
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + N L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 656 LDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 715
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 716 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 771
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 772 RPHMTALRKYTYGKHI 787
>gi|291399425|ref|XP_002716109.1| PREDICTED: pumilio 1-like isoform 2 [Oryctolagus cuniculus]
Length = 1092
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 757 IMEFSQDQHGSRFIQLKLERATTAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 816
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 817 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPADQQVINEMVRELDGHVLKCVKD 873
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 874 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 931
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 932 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 991
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 992 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1047
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1048 HKIRPHIATLRKYTYGKHI 1066
>gi|198433949|ref|XP_002130197.1| PREDICTED: similar to pumilio 2 [Ciona intestinalis]
Length = 1043
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 150/336 (44%), Gaps = 36/336 (10%)
Query: 90 NPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVF 149
NP H I+ +QD+ GS+++Q+KL + VFN + +Q++ + + +V
Sbjct: 685 NPHLHELVGHIVEFSQDQHGSRFIQQKLERATPQEKQLVFNEIIGAAYQLMTDVFGNYVI 744
Query: 150 GKFIE-----------TCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANR 198
KF E C +L + LQ+ +G I+K ++ +
Sbjct: 745 QKFFEFGSLEHKLALANCIHGHVLPLALQM--------------YGCRVIQKALECIPQE 790
Query: 199 PPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHE 258
+ ++K L + + G+ VV +C+E + + FI + L+ H
Sbjct: 791 QQV--EIVKELDGHLLKCVKDQNGNHVVQKCIECV--PPAQLQFIVDGFKGQVVGLSSHP 846
Query: 259 QGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFS 318
GC M ++ + IL + ++ L ++ GNYV+QH+LE I
Sbjct: 847 YGCRVMQRILEHCNEDQTGPILEELHQHSEMLVKDQYGNYVIQHILEHGRTENKNQIINE 906
Query: 319 LRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA 376
LRG + LS K S V++ C+ + T ++++E D +F + D+Y NYV+Q
Sbjct: 907 LRGRILTLSQHKFASNVIEKCVSHSSPQTRAWLIDEVCQEPDALFIMMKDQYANYVVQK- 965
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
+++ P L L+ K++ ++ +LR F YGKH+
Sbjct: 966 MLDVADPQQKKL---LIHKIRPHILTLRKFTYGKHI 998
>gi|413950241|gb|AFW82890.1| hypothetical protein ZEAMMB73_959107 [Zea mays]
Length = 869
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 158/322 (49%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E +
Sbjct: 538 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTA 597
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+ + + S+ +G I+K ++ V L+L K + L +M
Sbjct: 598 QIKELAGQLIGR---VLALSLQMYGCRVIQKAIEVVD-----LELQTKMVAELEGHVMRC 649
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E I H +FI + L+ H GC + ++ P+
Sbjct: 650 VRDQNGNHVIQKCIECIPQH--AIEFIISTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKT 707
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 708 QQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNV 767
Query: 336 VQNCLKYR--ITVNYIVEEFLLN---SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + + ++ E L + S+ + + D++GNYV+Q L ET +
Sbjct: 768 IEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGNYVVQKVL-ETCDDQQREM-- 824
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 825 -ILTRIKTHLNTLKKYTYGKHI 845
>gi|223947513|gb|ACN27840.1| unknown [Zea mays]
gi|413950240|gb|AFW82889.1| hypothetical protein ZEAMMB73_959107 [Zea mays]
Length = 873
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 158/322 (49%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E +
Sbjct: 542 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTA 601
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+ + + S+ +G I+K ++ V L+L K + L +M
Sbjct: 602 QIKELAGQLIGR---VLALSLQMYGCRVIQKAIEVVD-----LELQTKMVAELEGHVMRC 653
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E I H +FI + L+ H GC + ++ P+
Sbjct: 654 VRDQNGNHVIQKCIECIPQH--AIEFIISTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKT 711
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 712 QQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNV 771
Query: 336 VQNCLKYR--ITVNYIVEEFLLN---SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + + ++ E L + S+ + + D++GNYV+Q L ET +
Sbjct: 772 IEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGNYVVQKVL-ETCDDQQREM-- 828
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 829 -ILTRIKTHLNTLKKYTYGKHI 849
>gi|226505762|ref|NP_001146200.1| uncharacterized protein LOC100279770 [Zea mays]
gi|219886161|gb|ACL53455.1| unknown [Zea mays]
Length = 873
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 158/322 (49%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E +
Sbjct: 542 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTA 601
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+ + + S+ +G I+K ++ V L+L K + L +M
Sbjct: 602 QIKELAGQLIGR---VLALSLQMYGCRVIQKAIEVVD-----LELQTKMVAELEGHVMRC 653
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E I H +FI + L+ H GC + ++ P+
Sbjct: 654 VRDQNGNHVIQKCIECIPQH--AIEFIISTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKT 711
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 712 QQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNV 771
Query: 336 VQNCLKYR--ITVNYIVEEFLLN---SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + + ++ E L + S+ + + D++GNYV+Q L ET +
Sbjct: 772 IEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGNYVVQKVL-ETCDDQQREM-- 828
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 829 -ILTRIKTHLNTLKKYTYGKHI 849
>gi|52353575|gb|AAU44141.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa
Japonica Group]
Length = 874
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 155/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E +
Sbjct: 374 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPT 433
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+ + + S+ +G I+K ++ V LD K + L +M
Sbjct: 434 QIKELADQLIGR---VLALSLQMYGCRVIQKAIEVVG-----LDQQTKMVAELDGHVMRC 485
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E I H + FI + L+ H GC + ++ P
Sbjct: 486 VRDQNGNHVIQKCIECIPQHAIQ--FIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTT 543
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 544 QQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNV 603
Query: 336 VQNCLKYRITVN--YIVEEFLLN---SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + V ++ E L + S+ + + D++ NYV+Q L ET +
Sbjct: 604 IEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVL-ETCDDQQ---RE 659
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 660 AILTRIKAHLNTLKKYTYGKHI 681
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ + + I A +L + GNYVVQ E P
Sbjct: 373 HVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSP 432
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
I+ + L G + LSL G V+Q ++ + ++ + + R D+ G
Sbjct: 433 TQIKELADQLIGRVLALSLQMYGCRVIQKAIEV-VGLDQQTKMVAELDGHVMRCVRDQNG 491
Query: 370 NYVIQTAL 377
N+VIQ +
Sbjct: 492 NHVIQKCI 499
>gi|427782705|gb|JAA56804.1| Putative pumilio log 1 [Rhipicephalus pulchellus]
Length = 1138
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 151/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VF+ + + ++ + + +V KF E + +
Sbjct: 801 IVEFSQDQHGSRFIQQKLERATLAEKQLVFSEILGAAYNLMTDVFGNYVIQKFFEFGSAE 860
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + L++ + ++ +G I+K +++++ P V+K L +
Sbjct: 861 QKQALALKVKGH---VLPLALQMYGCRVIQKALESIS--PDQQKEVVKELDGHVLKCVKD 915
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + FI A L+ H GC + ++ G + +
Sbjct: 916 QNGNHVVQKCIECV--DPSALQFIINAFQGQVFCLSTHPYGCRVIQRILEHCTGEQTGPV 973
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYVVQHVLE P I ++RG + LS K S VV+ C
Sbjct: 974 LEELHQHTEQLVQDQYGNYVVQHVLEHGRPEDKGRIVAAVRGRVLPLSQHKFASNVVEKC 1033
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R ++EE D ++ + D+Y NYV+Q +IE P L L+
Sbjct: 1034 VTHASRSERALLIEEVCAYVDGPHSALYTMMKDQYANYVVQK-MIEVAEPPQRKL---LL 1089
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ SLR + YGKH+
Sbjct: 1090 HKIRPHVPSLRKYTYGKHI 1108
>gi|365986156|ref|XP_003669910.1| hypothetical protein NDAI_0D03530 [Naumovozyma dairenensis CBS 421]
gi|343768679|emb|CCD24667.1| hypothetical protein NDAI_0D03530 [Naumovozyma dairenensis CBS 421]
Length = 809
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 136/282 (48%), Gaps = 10/282 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ++L + DK+F T +++ + + ++ K IE + +
Sbjct: 492 IYSLCKDQHGCRFLQKQLDILGTEAADKIFEETKYHTIELMTDSFGNYLIQKLIERVSTE 551
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + + Q FV+ ++D G+ +++KL++ + +++ +L L
Sbjct: 552 QRTELAKIASPQ---FVEIALDPHGTRALQKLIECIDTDD-EAKIIVASLSGSIVQLSKD 607
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL+++ H FI+ A ++ + +A H GC + D + + +
Sbjct: 608 LNGNHVVQKCLQKL--HPKDFQFIFDATCQNSVDIATHRHGCCVLQRCFDHGTKEQCETL 665
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFV 335
+ + L+ + GNYVVQ+++ E D + I L+ +LS+ K GS V
Sbjct: 666 CDELLKHVDKLTLDPFGNYVVQYIITKETEKDKFDYTHKIVHLLKPKIAELSVHKFGSNV 725
Query: 336 VQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ L+ + ++ E L + I + D YGNYV+QTAL
Sbjct: 726 IEKLLRTPVATENMILELLNHKADIPNLLNDSYGNYVLQTAL 767
>gi|195111827|ref|XP_002000478.1| GI22503 [Drosophila mojavensis]
gi|193917072|gb|EDW15939.1| GI22503 [Drosophila mojavensis]
Length = 871
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 151/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VFN + + ++ + + +V KF E +
Sbjct: 427 IVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKFFEFGTPE 486
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 487 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 541
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + F+ A L+ H GC + ++ + I
Sbjct: 542 QNGNHVVQKCIECV--DPAALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTPEQTTPI 599
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + +L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 600 LDELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 659
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 660 VTHATRSERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 715
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 716 RPHMTALRKYTYGKHI 731
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIR-KLMKAVANRPPLL-DLVMKALKRLFRLLMMTKPGS 223
LQ+ V+ S D+ GS I+ KL +A A ++ + ++ A L MT
Sbjct: 418 LQLRDLSNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSL-----MTDVFG 472
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLI 283
+ V+Q + KN Q H L LA GC + ++ + ++++I++ +
Sbjct: 473 NYVIQKFFEFGTPEQKNTLGMQVK-GHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL 531
Query: 284 SVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR 343
+ ++ +GN+VVQ +E DP ++ + + +G LS G V+Q L++
Sbjct: 532 DGHVLKCVKDQNGNHVVQKCIECVDPAALQFVINAFKGQVYSLSTHPYGCRVIQRILEHC 591
Query: 344 IT--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I++E +++ + + D+YGNYVIQ L
Sbjct: 592 TPEQTTPILDELHEHTENLIQ---DQYGNYVIQHVL 624
>gi|242020205|ref|XP_002430546.1| pumilio, putative [Pediculus humanus corporis]
gi|212515710|gb|EEB17808.1| pumilio, putative [Pediculus humanus corporis]
Length = 588
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 152/316 (48%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + ++ + + +V KF E +
Sbjct: 262 IVEFSQDQHGSRFIQQKLERATVNEKQMVFNEILPSAYNLMTDVFGNYVIQKFFEFGTPE 321
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q I QI L + ++ +G I+K ++++ + +++ L +
Sbjct: 322 QKA-ILSQIVRGHVLLL--ALQMYGCRVIQKALESLTSEQQ--QEIVRELDGHVLKCVKD 376
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E++ H + FI A L+ H GC + ++ + I
Sbjct: 377 QNGNHVVQKCIERVDPHALQ--FIINALSGQVFALSTHPYGCRVIQRILEHCTPEQVAPI 434
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + +A L ++ GNYV+QHVLE P I ++RG + LS K S VV+ C
Sbjct: 435 LEELHSHAEQLVQDQFGNYVIQHVLEHGKPEDKSKIINNVRGKVLALSQHKFASNVVEKC 494
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R + ++EE +D ++ D+Y NYV+Q +I+ P + L+ K+
Sbjct: 495 VTHATRTERSVLIEEVCNYNDNALQLMMKDQYANYVVQ-KMIDVCEPTQRKI---LMHKI 550
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 551 RGHISALRKYTYGKHI 566
>gi|195153222|ref|XP_002017528.1| GL22345 [Drosophila persimilis]
gi|194112585|gb|EDW34628.1| GL22345 [Drosophila persimilis]
Length = 675
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 149/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 251 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGTPE 310
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I K +++++ P ++ L +
Sbjct: 311 QKNTLGMQVKGH---VLQLALQMYGCRVIHKGLESIS--PEQQQEIVHELDGHVLKCVKD 365
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 366 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 423
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + N L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 424 LDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 483
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 484 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 539
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 540 RPHMTALRKYTYGKHI 555
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Query: 248 LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELE 307
L H + + + G + ++ ++ + I A SL + GNYV+Q E
Sbjct: 248 LNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 307
Query: 308 DPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNY---IVEEFLLNSDQIFRVA 364
P T+ ++GH + L+L G V+ L+ I+ IV E + +
Sbjct: 308 TPEQKNTLGMQVKGHVLQLALQMYGCRVIHKGLE-SISPEQQQEIVHEL---DGHVLKCV 363
Query: 365 CDKYGNYVIQTALIETMRPNSLHL 388
D+ GN+V+Q IE + P +L
Sbjct: 364 KDQNGNHVVQKC-IECVDPVALQF 386
>gi|195055380|ref|XP_001994597.1| GH15257 [Drosophila grimshawi]
gi|193892360|gb|EDV91226.1| GH15257 [Drosophila grimshawi]
Length = 805
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 151/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VFN + + ++ + + +V KF E +
Sbjct: 392 IVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKFFEFGTPE 451
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 452 QKNNLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PDQQQEIVHELDGHVLKCVKD 506
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + F+ A L+ H GC + ++ + I
Sbjct: 507 QNGNHVVQKCIECV--DPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 564
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + +L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 565 LDELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 624
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 625 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 680
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 681 RPHMAALRKYTYGKHI 696
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 13/216 (6%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIR-KLMKAVANRPPLL-DLVMKALKRLFRLLMMTKPGS 223
LQ+ V+ S D+ GS I+ KL +A A ++ + ++ A L MT
Sbjct: 383 LQLRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSL-----MTDVFG 437
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLI 283
+ V+Q + KN+ Q H L LA GC + ++ + ++++I++ +
Sbjct: 438 NYVIQKFFEFGTPEQKNNLGMQVK-GHVLQLALQMYGCRVIQKALESISPDQQQEIVHEL 496
Query: 284 SVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR 343
+ ++ +GN+VVQ +E DP ++ + + +G LS G V+Q L++
Sbjct: 497 DGHVLKCVKDQNGNHVVQKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHC 556
Query: 344 IT--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I++E +++ + + D+YGNYVIQ L
Sbjct: 557 TAEQTTPILDELHEHTENLIQ---DQYGNYVIQHVL 589
>gi|157132421|ref|XP_001656036.1| pumilio [Aedes aegypti]
gi|108871194|gb|EAT35419.1| AAEL012420-PA [Aedes aegypti]
Length = 796
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 147/316 (46%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VFN + + ++ + + +V KF E + +
Sbjct: 382 IVEFSQDQHGSRFIQQKLERATAAEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEYGSPE 441
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q+ + ++ +G I+K ++++ +++ L +
Sbjct: 442 QKQALAQQVKGH---VLPLALQMYGCRVIQKALESIPTE--QQQEIVRELDGHVLKCVKD 496
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 497 QNGNHVVQKCIECV--EPTALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQTSPI 554
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + N L ++ GNYV+QHVLE P + ++RG + LS K S VV+ C
Sbjct: 555 LAELHANTEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQHKFASNVVEKC 614
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE +D V D+Y NYV+Q +I+ P + L+ K+
Sbjct: 615 VTHATRAERALLIEEVCSFNDAGLHVMMKDQYANYVVQK-MIDVSEPTQRKV---LLHKI 670
Query: 397 QQNLDSL-RFGYGKHV 411
+ +++SL ++ YGKH+
Sbjct: 671 RPHMNSLKKYTYGKHI 686
>gi|19115035|ref|NP_594123.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|2842704|sp|Q92359.1|YDHE_SCHPO RecName: Full=Pumilio domain-containing protein C6G9.14
gi|1644326|emb|CAB03616.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 681
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 138/285 (48%), Gaps = 13/285 (4%)
Query: 97 NSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETC 156
NS IL +D+ G +YLQ L + +D VF + ++ + + ++ K E
Sbjct: 345 NSNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHA 404
Query: 157 NEDQLLRIT-LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
+E Q R T +QI + V S + G+ +++K++ V++ P + ++ AL+ L
Sbjct: 405 SEAQ--RSTFIQIIAPK--LVPISFNMHGTRALQKIIDLVSS-PDQISCIVNALRPNVVL 459
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L G+ V+ +CL + + + FI+ A E L ++ H GC + D +
Sbjct: 460 LTKDLNGNHVIQKCLNKFSQEDCQ--FIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQ 517
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+Q++ I +A +L ++ GNYV+Q+VLEL +P E I LS K S V
Sbjct: 518 IEQLVEHIVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNV 577
Query: 336 VQNCLKY---RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ C+ + I I E L++ + ++ D + NYVIQTAL
Sbjct: 578 MEKCIFFAPAAIKEKLISE--LMDEKHLPKLLRDSFANYVIQTAL 620
>gi|403293272|ref|XP_003937644.1| PREDICTED: pumilio homolog 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1044
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 709 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 768
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 769 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 825
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 826 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 883
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 884 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 943
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 944 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 999
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1000 HKIRPHIATLRKYTYGKHI 1018
>gi|296207290|ref|XP_002750600.1| PREDICTED: pumilio homolog 1 isoform 4 [Callithrix jacchus]
Length = 1044
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 709 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 768
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 769 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 825
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 826 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 883
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 884 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 943
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 944 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 999
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1000 HKIRPHIATLRKYTYGKHI 1018
>gi|297282793|ref|XP_001096525.2| PREDICTED: pumilio homolog 1 isoform 3 [Macaca mulatta]
gi|332808250|ref|XP_001157224.2| PREDICTED: pumilio homolog 1 isoform 4 [Pan troglodytes]
gi|397515863|ref|XP_003828161.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan paniscus]
gi|402853681|ref|XP_003891519.1| PREDICTED: pumilio homolog 1 isoform 2 [Papio anubis]
Length = 1044
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 709 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 768
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 769 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 825
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 826 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 883
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 884 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 943
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 944 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 999
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1000 HKIRPHIATLRKYTYGKHI 1018
>gi|307187049|gb|EFN72338.1| Maternal protein pumilio [Camponotus floridanus]
Length = 787
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 146/316 (46%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF + + ++ + + +V KF E +
Sbjct: 423 IVEFSQDQHGSRFIQQKLERASANEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTPE 482
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++A P +++ L +
Sbjct: 483 QKSTLAQKVRGH---VLPLALQMYGCRVIQKALESIA--PEQQQEIVRELDGHVLKCVKD 537
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + F+ A L+ H GC + ++ + + I
Sbjct: 538 QNGNHVVQKCIECV--EPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTAEQTQGI 595
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + L ++ GNYV+QHVLE P + S+RG + LS K S VV+ C
Sbjct: 596 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLIGSVRGKVLALSQHKFASNVVEKC 655
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE +D V D+Y NYV+Q +I+ P + L+ K+
Sbjct: 656 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQK-MIDVAEPAQRKI---LMHKI 711
Query: 397 QQNLDSLR-FGYGKHV 411
+ +L SLR + YGKH+
Sbjct: 712 RPHLGSLRKYTYGKHI 727
>gi|357449403|ref|XP_003594978.1| Pumilio-like protein [Medicago truncatula]
gi|355484026|gb|AES65229.1| Pumilio-like protein [Medicago truncatula]
Length = 984
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL S + VF V +++ + + +V KF E N +
Sbjct: 661 IVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGNPE 720
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ Q + S+ +G I+K ++ + + LV + + R +
Sbjct: 721 QRKELAEKLAGQ---ILPLSLQMYGCRVIQKALEVIEHEQ-KAQLVRELDGNIMRCVR-D 775
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ- 278
+ G+ V+ +C+E I NK FI A L+ H GC + ++ + Q
Sbjct: 776 QNGNHVIQKCIESI--PTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQF 833
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
I+ I + SL+++ GNYV QHVLE P I L GH + LS K S VV+
Sbjct: 834 IVDEILESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEK 893
Query: 339 CLKYRITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
CL+Y ++ E + + +Q + + D++ NYVIQ +I+ N RL+
Sbjct: 894 CLEYGDASEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQK-VIDICSENQ---RARLL 949
Query: 394 TKLQQNLDSL-RFGYGKHV 411
+ ++ + ++L ++ YGKH+
Sbjct: 950 SHIRAHANALKKYTYGKHI 968
>gi|194390836|dbj|BAG62177.1| unnamed protein product [Homo sapiens]
Length = 1044
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 709 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 768
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 769 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 825
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 826 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 883
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 884 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 943
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 944 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 999
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1000 HKIRPHIATLRKYTYGKHI 1018
>gi|193788405|dbj|BAG53299.1| unnamed protein product [Homo sapiens]
Length = 925
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 159/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 590 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 649
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 650 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 706
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 707 QNGNHVVQKCVECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 764
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 765 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 824
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 825 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 880
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 881 HKIRPHIATLRKYTYGKHILAKLEKYYMKN 910
>gi|330801647|ref|XP_003288836.1| hypothetical protein DICPUDRAFT_98148 [Dictyostelium purpureum]
gi|325081082|gb|EGC34611.1| hypothetical protein DICPUDRAFT_98148 [Dictyostelium purpureum]
Length = 738
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 143/278 (51%), Gaps = 13/278 (4%)
Query: 103 LAQDEQGSQYLQEKLTSG-DSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
L + + G ++LQ+KL DS + +FN V + +++ + Y +++ + ++ C+ +Q
Sbjct: 434 LTKYQAGCRFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQR 493
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKP 221
+I +I + F + +G I+KL++ ++ P +D ++ ++K L
Sbjct: 494 RQIVDKIAPNVETF---ACHVYGIHGIQKLLQYLS--PDQVDSIISSIKNKVIQLSKDSK 548
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G+ +V L+Q N+ F+ A + + + H+ GC +N ID + +Q++
Sbjct: 549 GNYLVQSFLKQFSPEVNQ--FVCDAIMNNIQEICTHKVGCTVVNRCIDNANPQQLEQLVD 606
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I+ ++ L ++ GNYVVQH+L Y + I SL G+ +LS+ K S V++ CL+
Sbjct: 607 RITQHSLKLVQDQFGNYVVQHLLSKNKSYSSKLIK-SLLGNIAELSVQKFSSNVIEKCLQ 665
Query: 342 YRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
T Y I++E + I + DKY N+VIQTAL
Sbjct: 666 VADTETYESIIKE--ITEADILNLLQDKYANFVIQTAL 701
>gi|355745080|gb|EHH49705.1| hypothetical protein EGM_00414 [Macaca fascicularis]
Length = 1224
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 889 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 948
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 949 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 1005
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 1006 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1063
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1064 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1123
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1124 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1179
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1180 HKIRPHIATLRKYTYGKHI 1198
>gi|403293274|ref|XP_003937645.1| PREDICTED: pumilio homolog 1 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1224
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 889 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 948
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 949 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 1005
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 1006 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1063
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1064 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1123
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1124 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1179
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1180 HKIRPHIATLRKYTYGKHI 1198
>gi|325187460|emb|CCA21998.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 888
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 20/288 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKV-FNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
+++D+ G + LQE+L D + L ++ F +++ + + ++F K I +E Q
Sbjct: 535 MSKDQNGCRLLQEQLEYDDRKTLWQIIFQESLHHLPEMMVDPFGNYLFQKLIARADEWQR 594
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLM---------KAVANRPPLLDLVMKALKRL 212
L I + + A+++ G+ S++K++ K A L L++ ALK
Sbjct: 595 LAIVRAVCPH---LMAAALNLHGTRSVQKVVEICAISQSEKKDATSIDLPQLIVHALKDD 651
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
L + G+ V+ + L+ Y + FI+ A C + H GC + +D
Sbjct: 652 AVRLCIDSNGNHVIQRALQ--YFNPKFTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAAN 709
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
++K+++ + +A L ++ GNYVVQ+VL+ I GH +LS+ K
Sbjct: 710 VTQKKELIAQVEYHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMMKPLGHVFELSIQKFS 769
Query: 333 SFVVQNCLKY---RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
S VV+ CL+ RI Y+ E L+ ++ R+ D++ NYV+Q AL
Sbjct: 770 SNVVEKCLEKAPERIRRRYVEE--LIVCAKMQRLLQDQFANYVVQRAL 815
>gi|119628037|gb|EAX07632.1| pumilio homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1224
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 889 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 948
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 949 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 1005
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 1006 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1063
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1064 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1123
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1124 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1179
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1180 HKIRPHIATLRKYTYGKHI 1198
>gi|109000868|ref|XP_001096289.1| PREDICTED: pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|114555200|ref|XP_001157067.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan troglodytes]
gi|397515865|ref|XP_003828162.1| PREDICTED: pumilio homolog 1 isoform 3 [Pan paniscus]
gi|355557757|gb|EHH14537.1| hypothetical protein EGK_00481 [Macaca mulatta]
Length = 1224
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 889 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 948
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 949 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 1005
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 1006 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1063
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1064 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1123
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1124 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1179
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1180 HKIRPHIATLRKYTYGKHI 1198
>gi|356574619|ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 1000
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 158/326 (48%), Gaps = 22/326 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + K+F + ++ + + +V KF E +
Sbjct: 656 VVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTDS 715
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALKRLFRLLM 217
Q + Q+T + S+ +G I+K ++ V + L+ + A+ + R
Sbjct: 716 QRKELASQLTGH---VLPLSLQMYGCRVIQKALEVVDADQQGQLVSELNGAIMKCVR--- 769
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +C+E + +K FI + + L+ H GC + ++ +
Sbjct: 770 -DQNGNHVIQKCIECVPQ--DKIQFIVSSFYGQVVLLSTHPYGCRVIQRVLEHCDDLNTQ 826
Query: 278 QILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
QI+ I + +L+++ GNYV+QH++E P+ I L G + +S K S V+
Sbjct: 827 QIIMDEIMQSVGTLAQDQYGNYVIQHIVEHGKPHERTAIISKLAGQIVKMSQQKFASNVI 886
Query: 337 QNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQR 391
+ CL + +V E L SD+ + + D +GNYV+Q L ET SL L
Sbjct: 887 EKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVL-ETCDDRSLEL--- 942
Query: 392 LVTKLQQNLDSL-RFGYGKHVYNFIK 416
++++++ +L++L R+ YGKH+ + ++
Sbjct: 943 ILSRIKVHLNALKRYTYGKHIVSRVE 968
>gi|24645262|ref|NP_731314.1| pumilio, isoform A [Drosophila melanogaster]
gi|24645264|ref|NP_524285.2| pumilio, isoform C [Drosophila melanogaster]
gi|24645266|ref|NP_731315.1| pumilio, isoform D [Drosophila melanogaster]
gi|442618162|ref|NP_001262403.1| pumilio, isoform G [Drosophila melanogaster]
gi|34978383|sp|P25822.2|PUM_DROME RecName: Full=Maternal protein pumilio
gi|23170765|gb|AAF54340.2| pumilio, isoform A [Drosophila melanogaster]
gi|23170766|gb|AAN13409.1| pumilio, isoform C [Drosophila melanogaster]
gi|23170767|gb|AAN13410.1| pumilio, isoform D [Drosophila melanogaster]
gi|440217234|gb|AGB95785.1| pumilio, isoform G [Drosophila melanogaster]
Length = 1533
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 1116 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 1175
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 1176 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 1230
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 1231 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 1288
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 1289 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1348
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 1349 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 1404
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 1405 RPHMAALRKYTYGKHI 1420
>gi|62896769|dbj|BAD96325.1| pumilio homolog 1 variant [Homo sapiens]
Length = 1188
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 969
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 970 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1027
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1028 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1087
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1088 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1143
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1144 HKIRPHIATLRKYTYGKHI 1162
>gi|344245037|gb|EGW01141.1| Pumilio-like 1 [Cricetulus griseus]
Length = 364
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 29 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 88
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 89 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 145
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 146 QNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 203
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 204 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 263
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 264 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 319
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 320 HKIRPHIATLRKYTYGKHI 338
>gi|242556581|pdb|3GVO|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
gi|242556583|pdb|3GVT|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
gi|242556584|pdb|3GVT|B Chain B, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
Length = 351
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 156/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 28 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 87
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 88 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQ--SEMVKELDGHVLKCVKD 142
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 143 QNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 200
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 201 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 260
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 261 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 316
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 317 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 346
>gi|195452258|ref|XP_002073278.1| GK14049 [Drosophila willistoni]
gi|194169363|gb|EDW84264.1| GK14049 [Drosophila willistoni]
Length = 873
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 454 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGTPE 513
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 514 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 568
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 569 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 626
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 627 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILITSVRGKVLVLSQHKFASNVVEKC 686
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 687 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 742
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 743 RPHMAALRKYTYGKHI 758
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIR-KLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSS 224
LQ+ V+ S D+ GS I+ KL +A A ++ + L + L MT +
Sbjct: 445 LQLRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQMV--FSEILGAAYSL--MTDVFGN 500
Query: 225 VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
V+Q + KN Q H L LA GC + ++ + ++++I++ +
Sbjct: 501 YVIQKFFEFGTPEQKNTLGMQVK-GHVLQLALQMYGCRVIQKALESISPEQQQEIVHELD 559
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
+ ++ +GN+VVQ +E DP ++ I + +G LS G V+Q L++
Sbjct: 560 GHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT 619
Query: 345 T--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I++E +++Q+ + D+YGNYVIQ L
Sbjct: 620 AEQTTPILDELHEHTEQLIQ---DQYGNYVIQHVL 651
>gi|241952587|ref|XP_002419015.1| mRNA-binding protein, putative [Candida dubliniensis CD36]
gi|223642355|emb|CAX42597.1| mRNA-binding protein, putative [Candida dubliniensis CD36]
Length = 789
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 153/310 (49%), Gaps = 38/310 (12%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
IL L +D+ G ++LQ +L + + L +FN + +++ + + ++ K N +
Sbjct: 449 ILTLCKDQHGCRFLQRELFNETNATL--IFNEIYFKVVELMIDPFGNYLIQKLFTMINLE 506
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q R+ L S ++LF + ++D G+ S++KL+ V ++++ + L +L
Sbjct: 507 Q--RLVLINQSSNELF-RIALDPHGTRSLQKLID-VIENNEEIEIITRNLYSNIVVLSRD 562
Query: 220 KPGSSVVLQCL-----------------EQIYHHN-NKNDFIYQAALEHCLYLACHEQGC 261
G+ VV + L ++ H N N+N FI+ + LY+ACH GC
Sbjct: 563 LNGNHVVQKILTKFNTISHNANSSHSSKDETNHENQNQNQFIFDIIQANLLYIACHRHGC 622
Query: 262 INMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL------------ELEDP 309
+ +D + +Q+ I+ + LS + GNYVVQ+VL + ED
Sbjct: 623 CVLQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVSQTKIIDDEEDK 682
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFL-LNSDQIF-RVACDK 367
+++ I ++ ++I LSL K GS V++ CLK N +++ + L+ Q F ++ D
Sbjct: 683 QVMDNIIQEIKSNFIQLSLHKFGSNVIEKCLKITSISNDLIDNLIELDHGQAFNQLLNDP 742
Query: 368 YGNYVIQTAL 377
+GNYV+QT+L
Sbjct: 743 FGNYVLQTSL 752
>gi|119628036|gb|EAX07631.1| pumilio homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 1189
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 913
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 914 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 970
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 971 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1028
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1029 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1088
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1089 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1144
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1145 HKIRPHIATLRKYTYGKHI 1163
>gi|426221805|ref|XP_004005097.1| PREDICTED: pumilio homolog 1 isoform 2 [Ovis aries]
Length = 1038
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 703 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 762
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 763 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 819
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 820 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 877
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 878 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 937
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 938 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 993
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 994 HKIRPHIATLRKYTYGKHI 1012
>gi|66932909|ref|NP_001018494.1| pumilio homolog 1 isoform 1 [Homo sapiens]
gi|380784595|gb|AFE64173.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|383410799|gb|AFH28613.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|384943764|gb|AFI35487.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|410225218|gb|JAA09828.1| pumilio homolog 1 [Pan troglodytes]
gi|410266290|gb|JAA21111.1| pumilio homolog 1 [Pan troglodytes]
gi|410304038|gb|JAA30619.1| pumilio homolog 1 [Pan troglodytes]
gi|410350697|gb|JAA41952.1| pumilio homolog 1 [Pan troglodytes]
Length = 1188
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 969
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 970 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1027
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1028 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1087
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1088 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1143
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1144 HKIRPHIATLRKYTYGKHI 1162
>gi|119628035|gb|EAX07630.1| pumilio homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1193
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 858 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 917
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 918 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 974
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 975 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1032
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1033 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1092
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1093 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1148
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1149 HKIRPHIATLRKYTYGKHI 1167
>gi|390336472|ref|XP_794621.3| PREDICTED: pumilio homolog 1 [Strongylocentrotus purpuratus]
Length = 1183
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 152/331 (45%), Gaps = 22/331 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VF+ + + ++ + + +V KF E +
Sbjct: 854 IVEFSQDQHGSRFIQQKLERATPTERQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGLPE 913
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVM-KALKRLFRLLMM 218
Q + +I + ++ +G I+K ++++ PP L M K L +
Sbjct: 914 QKQALAQRIRGH---VLPLALQMYGCRVIQKALESI---PPELQTEMVKELDGHVLKCVK 967
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
+ G+ VV +C+E + FI A L+ H GC + ++ + K
Sbjct: 968 DQNGNHVVQKCIECV--EPAALQFIVDAFRGQVYSLSTHPYGCRVIQRILEHCIVEQTKP 1025
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+L + SL ++ GNYV+QHVLE P I +RG + LS K S VV+
Sbjct: 1026 LLDELHQQTESLVQDQYGNYVIQHVLEHGRPEDKSKIVLEMRGKVLVLSQHKFASNVVEK 1085
Query: 339 CLKY--RITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
C+ + R +++E N ++ + D+Y NYV+Q +I+ PN + L+ K
Sbjct: 1086 CITHSSRPERALLIDEVCSYNDGALYTMMKDQYANYVVQK-MIDVSEPNQRKI---LMHK 1141
Query: 396 LQQNLDSLR-FGYGKHVYN-----FIKDCDL 420
++ + SLR + YGKH+ F+K DL
Sbjct: 1142 IRPYVASLRKYTYGKHILAKLEKFFMKSNDL 1172
>gi|109000894|ref|XP_001096958.1| PREDICTED: pumilio homolog 1 isoform 6 [Macaca mulatta]
Length = 1162
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 827 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 886
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 887 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 943
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 944 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1001
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1002 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1061
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1062 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1117
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1118 HKIRPHIATLRKYTYGKHI 1136
>gi|45551850|ref|NP_731316.2| pumilio, isoform B [Drosophila melanogaster]
gi|45446432|gb|AAF54338.2| pumilio, isoform B [Drosophila melanogaster]
Length = 1185
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 768 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 827
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 828 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 882
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 883 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 940
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 941 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1000
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 1001 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 1056
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 1057 RPHMAALRKYTYGKHI 1072
>gi|357167245|ref|XP_003581070.1| PREDICTED: pumilio homolog 2-like [Brachypodium distachyon]
Length = 764
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 161/322 (50%), Gaps = 17/322 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ ++ D+ GS+++Q+KL + +K+F + + + + +V KF E E
Sbjct: 422 VMKVSVDQYGSRFIQQKLEEASAADREKIFPEILSNAIPLTTDVFGNYVIQKFFEFATES 481
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
QL ++ ++ + + S +G ++K+++ V + +D+V + LK +
Sbjct: 482 QLNQLADKLNGR---IFELSFHMYGCRVVQKVIEVV-DMDRKIDIVQE-LKNYVLKCIGD 536
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR-RKQ 278
+ G+ V+ +C+E + + F+ +A L L H+ GC + ++ P +
Sbjct: 537 QNGNHVIQKCIECVPEE--RIPFVIEAILSQIFMLCTHQYGCRVIQRVLEHCHDPATQSA 594
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
++ I +A L+ + GNYVVQHVL+ P +I L G + LS K S V++
Sbjct: 595 VMNEIVQHACGLTEDKFGNYVVQHVLQHGKPEERSSIIQKLSGQVLFLSQQKYASNVIEK 654
Query: 339 CLKYRI--TVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
CL Y + ++ E +++S Q F+ D++GNYV+Q L +T L + +++
Sbjct: 655 CLVYGTPEERDGLIRE-IVSSGQTFQALMKDQFGNYVVQKVL-QTCDDRHLEM---ILSS 709
Query: 396 LQQNLDSLR-FGYGKHVYNFIK 416
++ +L+ L+ + YGKH+ + I+
Sbjct: 710 IKLHLNELKTYTYGKHIVSRIE 731
>gi|195499330|ref|XP_002096903.1| GE24797 [Drosophila yakuba]
gi|194183004|gb|EDW96615.1| GE24797 [Drosophila yakuba]
Length = 935
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 518 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 577
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 578 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 632
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 633 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 690
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 691 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 750
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 751 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 806
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 807 RPHMAALRKYTYGKHI 822
>gi|367002536|ref|XP_003686002.1| hypothetical protein TPHA_0F00820 [Tetrapisispora phaffii CBS 4417]
gi|357524302|emb|CCE63568.1| hypothetical protein TPHA_0F00820 [Tetrapisispora phaffii CBS 4417]
Length = 794
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 150/303 (49%), Gaps = 21/303 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ++L + + +F + +++ + + ++ K +E +
Sbjct: 475 IYSLCKDQHGCRFLQKQLDLVGEQAANTIFEEIKNHCIELMTDSFGNYLIQKLLERITLE 534
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L I + I++ F+ +++ G+ +++KL++ + +++ +LK L
Sbjct: 535 QRL-IIINISAP--YFIDIALNPHGTRALQKLVECIKTDEEA-KIIVDSLKPSIVELSKD 590
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV + L+Q + FI++AA ++C+ +A H GC + +D + + +
Sbjct: 591 LNGNHVVQKILQQFKPEFIQ--FIFEAACQNCIEIATHRHGCCVLQRCLDSGTTTQCESL 648
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYI--------DLSLTKC 331
+ +N LS N GNYV+Q+V+ E +ET ++ YI DLSL K
Sbjct: 649 CEQLLINIDRLSFNPFGNYVIQYVITKE----VETGNYNYSYKYINILKHKIKDLSLHKF 704
Query: 332 GSFVVQNCLKYRITVNYIVEEFLLNS--DQIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
GS VV+ L+ + I+ E L ++I + D YGNYV+QTAL T N L+
Sbjct: 705 GSNVVEKLLRTPVLSETIILELLKKGGKNEIEILLNDSYGNYVLQTALDVTHESNEA-LY 763
Query: 390 QRL 392
++L
Sbjct: 764 KKL 766
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 130/294 (44%), Gaps = 32/294 (10%)
Query: 126 DKVFNVVSEFTFQIICNQYARFVFGKFIETC--NEDQLLRITLQITS--QDQ---LFVQA 178
D N V + NQY +V K+ ++ N+ L + I S +DQ F+Q
Sbjct: 431 DNKVNYVRNRNGNQMKNQYGGYVQRKYDDSLIYNDATLDQFIGSIYSLCKDQHGCRFLQK 490
Query: 179 SVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNN 238
+D G + + + + N ++L+ + G+ ++ + LE+I
Sbjct: 491 QLDLVGEQAANTIFEEIKNH--CIELMTDSF------------GNYLIQKLLERITLE-- 534
Query: 239 KNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGN 297
+ I + + + +A + G + ++ +K +I+ + + LS++ +GN
Sbjct: 535 QRLIIINISAPYFIDIALNPHGTRALQKLVECIKTDEEAKIIVDSLKPSIVELSKDLNGN 594
Query: 298 YVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITV--NYIVEEFLL 355
+VVQ +L+ P I+ I + + I+++ + G V+Q CL T + E+ L+
Sbjct: 595 HVVQKILQQFKPEFIQFIFEAACQNCIEIATHRHGCCVLQRCLDSGTTTQCESLCEQLLI 654
Query: 356 NSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL---RFG 406
N D R++ + +GNYVIQ + + + + + + + L+ + L +FG
Sbjct: 655 NID---RLSFNPFGNYVIQYVITKEVETGNYNYSYKYINILKHKIKDLSLHKFG 705
>gi|194903420|ref|XP_001980865.1| GG17394 [Drosophila erecta]
gi|190652568|gb|EDV49823.1| GG17394 [Drosophila erecta]
Length = 937
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 520 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 579
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 580 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 634
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 635 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 692
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 693 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 752
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 753 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 808
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 809 RPHMAALRKYTYGKHI 824
>gi|28573153|ref|NP_788604.1| pumilio, isoform E [Drosophila melanogaster]
gi|25013093|gb|AAN71644.1| SD07661p [Drosophila melanogaster]
gi|28381200|gb|AAO41523.1| pumilio, isoform E [Drosophila melanogaster]
Length = 935
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 518 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 577
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 578 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 632
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 633 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 690
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 691 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 750
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 751 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 806
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 807 RPHMAALRKYTYGKHI 822
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIR-KLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSS 224
LQ+ V+ S D+ GS I+ KL +A A ++ + L + L MT +
Sbjct: 509 LQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMV--FSEILAAAYSL--MTDVFGN 564
Query: 225 VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
V+Q + KN Q H L LA GC + ++ + ++++I++ +
Sbjct: 565 YVIQKFFEFGTPEQKNTLGMQVK-GHVLQLALQMYGCRVIQKALESISPEQQQEIVHELD 623
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
+ ++ +GN+VVQ +E DP ++ I + +G LS G V+Q L++
Sbjct: 624 GHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT 683
Query: 345 T--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I++E +++Q+ + D+YGNYVIQ L
Sbjct: 684 AEQTTPILDELHEHTEQLIQ---DQYGNYVIQHVL 715
>gi|115442517|ref|NP_001045538.1| Os01g0971900 [Oryza sativa Japonica Group]
gi|57899216|dbj|BAD87365.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group]
gi|113535069|dbj|BAF07452.1| Os01g0971900 [Oryza sativa Japonica Group]
gi|218189826|gb|EEC72253.1| hypothetical protein OsI_05392 [Oryza sativa Indica Group]
gi|222619956|gb|EEE56088.1| hypothetical protein OsJ_04928 [Oryza sativa Japonica Group]
Length = 894
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 154/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF + ++ + + +V KF E +
Sbjct: 564 VVEFSADQYGSRFIQQKLETASTEEKDMVFAEIMPQALTLMTDVFGNYVVQKFFEHGSSA 623
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+ + + S+ +G I+K ++ V LD K + L +M
Sbjct: 624 QIKELADQLIGR---VLALSLQMYGCRVIQKAIEVVD-----LDQQTKMVAELDGQVMRC 675
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E I H + FI + L+ H GC + ++ P+
Sbjct: 676 VRDQNGNHVIQKCIECIPQHAIQ--FIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKT 733
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+ + GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 734 QQIMMDEILQSVCLLATDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNV 793
Query: 336 VQNCLKYR--ITVNYIVEEFLLNSDQIFRVAC---DKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + + ++ E L +S++ + D++ NYV+Q L ET +
Sbjct: 794 IEKCLAFGNPVERQVLIGEMLGSSNESEHLEVMMKDQFANYVVQKVL-ETCDDQQREM-- 850
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 851 -ILTRIKAHLNTLKKYTYGKHI 871
>gi|14719326|gb|AAK73144.1|AC079022_17 putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa]
Length = 851
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 155/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E +
Sbjct: 519 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPT 578
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+ + + S+ +G I+K ++ V LD K + L +M
Sbjct: 579 QIKELADQLIGR---VLALSLQMYGCRVIQKAIEVVG-----LDQQTKMVAELDGHVMRC 630
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E I H + FI + L+ H GC + ++ P
Sbjct: 631 VRDQNGNHVIQKCIECIPQHAIQ--FIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTT 688
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 689 QQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNV 748
Query: 336 VQNCLKYR--ITVNYIVEEFLLN---SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + + ++ E L + S+ + + D++ NYV+Q L ET +
Sbjct: 749 IEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVL-ETCDDQQ---RE 804
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 805 AILTRIKAHLNTLKKYTYGKHI 826
>gi|222629930|gb|EEE62062.1| hypothetical protein OsJ_16846 [Oryza sativa Japonica Group]
Length = 878
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 155/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E +
Sbjct: 546 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPT 605
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+ + + S+ +G I+K ++ V LD K + L +M
Sbjct: 606 QIKELADQLIGR---VLALSLQMYGCRVIQKAIEVVG-----LDQQTKMVAELDGHVMRC 657
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E I H + FI + L+ H GC + ++ P
Sbjct: 658 VRDQNGNHVIQKCIECIPQHAIQ--FIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTT 715
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 716 QQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNV 775
Query: 336 VQNCLKYR--ITVNYIVEEFLLN---SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + + ++ E L + S+ + + D++ NYV+Q L ET +
Sbjct: 776 IEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVL-ETCDDQQ---RE 831
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 832 AILTRIKAHLNTLKKYTYGKHI 853
>gi|71395516|ref|XP_802323.1| pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL
Brener]
gi|70861784|gb|EAN80877.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 449
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 70 NPQYETITSSNFQ---TPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKL--TSGDSRF 124
NP + + + TP G + + ++ +A+D+ G ++LQ L ++GD F
Sbjct: 176 NPHHSHVAVRGYSGNITPEGLRGSVYE---------IAKDQHGCRFLQRLLGGSNGDGEF 226
Query: 125 LDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFG 184
+ + N V +++ +QYA F+ K + +D ++ + + ++ G
Sbjct: 227 VRIIMNEVVPHVAELMIDQYANFLIQKLFDMMPQDVRYKVACVAAPK---IISIALTPHG 283
Query: 185 SSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIY 244
+ S++K+++ +A+R + D++ +AL + L+ G+ V+ + L++ H + +FIY
Sbjct: 284 TFSVQKMVETIASREEM-DILREALSKDVVRLVKDAHGNHVIQKVLQRFSHADK--EFIY 340
Query: 245 QAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL 304
A C+ +A ++QGC + ++ +R ++ I ++ + GNYV+Q+VL
Sbjct: 341 AAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQILRCCLQIAEDPFGNYVLQYVL 400
Query: 305 ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
E D +TI + H + L + K S V++ L+
Sbjct: 401 ESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKVLR 437
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 247 ALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGNYVVQHVLE 305
A + +A G ++ ++ + IL +S + L ++ GN+V+Q VL+
Sbjct: 270 AAPKIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVVRLVKDAHGNHVIQKVLQ 329
Query: 306 LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFR--- 362
E I ++ I ++ K G V+Q CL+Y L+N QI R
Sbjct: 330 RFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRAT---LVN--QILRCCL 384
Query: 363 -VACDKYGNYVIQTAL 377
+A D +GNYV+Q L
Sbjct: 385 QIAEDPFGNYVLQYVL 400
>gi|15220239|ref|NP_174820.1| protein pumilio 17 [Arabidopsis thaliana]
gi|12322098|gb|AAG51092.1|AC027032_12 RNA-binding protein, putative [Arabidopsis thaliana]
gi|332193710|gb|AEE31831.1| protein pumilio 17 [Arabidopsis thaliana]
Length = 304
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 115/215 (53%), Gaps = 20/215 (9%)
Query: 208 ALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNF 267
A+ RLF +M+ K S V +Q + +I+ + K + +Y L + L+LA + GCI +N
Sbjct: 89 AIMRLFIHVMIDKYASYVAIQGM-RIFKQD-KRELMYDHILRYALFLARDQYGCIALNEI 146
Query: 268 IDEMKGPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
I E+ P R +++ ++S NA LS + GN+VVQHVL+L D I L G+ ++L
Sbjct: 147 IKELDDPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVEL 206
Query: 327 SLTKCGSFVVQNCLKYR-ITVNYIVEEFLL-NSDQIFRVACDKYGNYV----------IQ 374
S K GS++V+ L+ R I + IV + L ++ + R+A + GN+V I
Sbjct: 207 SFKKYGSYIVERLLEVRDIPMATIVLDLLACKTEMLIRLARSENGNFVVCKLLELTNDIL 266
Query: 375 TA-----LIETMRPNSLHLHQRLVTKLQQNLDSLR 404
TA L+ +RP LH+ +K+ L S+R
Sbjct: 267 TADLFYSLVNKLRPYRFLLHRFPESKIVAILGSMR 301
>gi|414587978|tpg|DAA38549.1| TPA: hypothetical protein ZEAMMB73_234832 [Zea mays]
Length = 764
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 156/314 (49%), Gaps = 17/314 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
++ D+ GS+++Q+KL +K+F + + + + +V KF E E QL+
Sbjct: 425 VSMDQYGSRFIQQKLEIASPDDREKIFPEILSNVIVLTTDVFGNYVIQKFFEFATESQLI 484
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ Q+ + ++ S+ +G ++K+++ V +D+V + LK + + G
Sbjct: 485 QLADQLKGR---ILELSLQMYGCRVVQKVLEVVG-MDQKVDIVHE-LKNYILKCIGDQNG 539
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-RRKQILY 281
+ V+ +C+E + ++ F+ L L L H+ GC + ++ P + I+
Sbjct: 540 NHVIQKCIECVPE--DRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSAIMN 597
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I L+ + GNYVVQHVLE P I L G + LS K S V++ CL+
Sbjct: 598 EIMQQTFHLTDDKFGNYVVQHVLEHGKPEERSVIIQKLSGQVVTLSKQKFASNVIEKCLE 657
Query: 342 YRI--TVNYIVEEFLLNSDQIFR-VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
+ + ++ E +++S Q F+ + D++GNYV+Q L ET L + +++ ++
Sbjct: 658 FGTPEERDSLIGE-IISSGQTFQELMKDQFGNYVVQKVL-ETCDDKYLEM---ILSSIKL 712
Query: 399 NLDSLR-FGYGKHV 411
+L+ L+ + YGKH+
Sbjct: 713 HLNELKNYTYGKHI 726
>gi|442618164|ref|NP_001262404.1| pumilio, isoform H [Drosophila melanogaster]
gi|440217235|gb|AGB95786.1| pumilio, isoform H [Drosophila melanogaster]
Length = 921
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 504 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 563
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 564 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 618
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 619 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 676
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 677 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 736
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 737 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 792
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 793 RPHMAALRKYTYGKHI 808
>gi|386765393|ref|NP_001247002.1| pumilio, isoform F [Drosophila melanogaster]
gi|383292588|gb|AFH06320.1| pumilio, isoform F [Drosophila melanogaster]
Length = 925
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 508 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 567
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 568 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 622
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 623 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 680
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 681 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 740
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 741 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 796
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 797 RPHMAALRKYTYGKHI 812
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIR-KLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSS 224
LQ+ V+ S D+ GS I+ KL +A A ++ + L + L MT +
Sbjct: 499 LQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMV--FSEILAAAYSL--MTDVFGN 554
Query: 225 VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
V+Q + KN Q H L LA GC + ++ + ++++I++ +
Sbjct: 555 YVIQKFFEFGTPEQKNTLGMQVK-GHVLQLALQMYGCRVIQKALESISPEQQQEIVHELD 613
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
+ ++ +GN+VVQ +E DP ++ I + +G LS G V+Q L++
Sbjct: 614 GHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT 673
Query: 345 T--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I++E +++Q+ + D+YGNYVIQ L
Sbjct: 674 AEQTTPILDELHEHTEQLIQ---DQYGNYVIQHVL 705
>gi|410966648|ref|XP_003989842.1| PREDICTED: pumilio homolog 1 isoform 2 [Felis catus]
Length = 1224
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 889 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 948
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 949 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 1005
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 1006 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1063
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1064 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1123
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1124 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1179
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1180 HKIRPHIATLRKYTYGKHI 1198
>gi|195330502|ref|XP_002031942.1| GM26283 [Drosophila sechellia]
gi|194120885|gb|EDW42928.1| GM26283 [Drosophila sechellia]
Length = 873
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 456 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 515
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 516 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 570
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 571 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 628
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 629 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 688
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 689 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 744
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 745 RPHMAALRKYTYGKHI 760
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIR-KLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSS 224
LQ+ V+ S D+ GS I+ KL +A A ++ + L + L MT +
Sbjct: 447 LQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMV--FSEILAAAYSL--MTDVFGN 502
Query: 225 VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
V+Q + KN Q H L LA GC + ++ + ++++I++ +
Sbjct: 503 YVIQKFFEFGTPEQKNTLGMQVK-GHVLQLALQMYGCRVIQKALESISPEQQQEIVHELD 561
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
+ ++ +GN+VVQ +E DP ++ I + +G LS G V+Q L++
Sbjct: 562 GHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT 621
Query: 345 T--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I++E +++Q+ + D+YGNYVIQ L
Sbjct: 622 AEQTTPILDELHEHTEQLIQ---DQYGNYVIQHVL 653
>gi|33589344|gb|AAQ22439.1| RE63138p [Drosophila melanogaster]
Length = 1533
Score = 90.9 bits (224), Expect = 1e-15, Method: Composition-based stats.
Identities = 77/316 (24%), Positives = 148/316 (46%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 1116 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 1175
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 1176 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 1230
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 1231 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 1288
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 1289 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1348
Query: 340 LKYRI---TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + I E N + + + D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 1349 VTHATRGERTGLIDEVCTFNDNALHMMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 1404
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 1405 RPHMAALRKYTYGKHI 1420
Score = 55.8 bits (133), Expect = 4e-05, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIR-KLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSS 224
LQ+ V+ S D+ GS I+ KL +A A ++ + L + L MT +
Sbjct: 1107 LQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMV--FSEILAAAYSL--MTDVFGN 1162
Query: 225 VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
V+Q + KN Q H L LA GC + ++ + ++++I++ +
Sbjct: 1163 YVIQKFFEFGTPEQKNTLGMQVK-GHVLQLALQMYGCRVIQKALESISPEQQQEIVHELD 1221
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
+ ++ +GN+VVQ +E DP ++ I + +G LS G V+Q L++
Sbjct: 1222 GHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT 1281
Query: 345 T--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I++E +++Q+ + D+YGNYVIQ L
Sbjct: 1282 AEQTTPILDELHEHTEQLIQ---DQYGNYVIQHVL 1313
>gi|385303897|gb|EIF47942.1| member of the puf protein family [Dekkera bruxellensis AWRI1499]
Length = 591
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 161/331 (48%), Gaps = 26/331 (7%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A +L LA+D+ G +YLQ KL G ++F V +++ + + ++ K +
Sbjct: 265 AEMNVLELARDQCGCRYLQRKLDEGXXDSFAQIFGPVCAHAAELMMDPFGNYLMQKVMGC 324
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
C +QL + + S +VD+ G+ +++KL++ + R + L+ + L
Sbjct: 325 CTVEQLDAV---LISAGPSLCAVAVDQHGTRALQKLIERIXTRKQRM-LLERYLAPYVVA 380
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ V+ +C+++ ++ FI + + ++ H+ GC + +++ +
Sbjct: 381 LIGDLNGNHVIQKCVQRF--RDSDLQFIVDQISANIVPVSTHKHGCCVLQKLLNKCNMQQ 438
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELE----DPYLIETICFSLRGHYIDLSLTKC 331
+Q+ I ++ +L + NYVVQ++ +E + L+ T+ +R LS K
Sbjct: 439 IEQLGXQIVQHSLALMEDQYANYVVQYLASMEIDSLNAQLLATVAPCVR----QLSCQKF 494
Query: 332 GSFVVQNCLK---YRI---TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNS 385
S VV+ CL+ YR+ V+ +++E LL D + + D+YGNYV+QTA M +S
Sbjct: 495 SSNVVEKCLRIRSYRVFSQFVSRLLDEILL-PDVLPVLIRDQYGNYVVQTA----MEVSS 549
Query: 386 LHLHQRLVTKLQQNLDSLRFG-YGKHVYNFI 415
R +L L +RF +GK ++N +
Sbjct: 550 AEYKLRFARELAPLLPEIRFASFGKRIHNXV 580
>gi|194744548|ref|XP_001954755.1| GF18428 [Drosophila ananassae]
gi|190627792|gb|EDV43316.1| GF18428 [Drosophila ananassae]
Length = 896
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 456 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGTPE 515
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 516 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 570
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 571 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 628
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 629 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 688
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 689 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 744
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 745 RPHMAALRKYTYGKHI 760
>gi|73950042|ref|XP_852168.1| PREDICTED: pumilio homolog 1 isoform 2 [Canis lupus familiaris]
Length = 1224
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 889 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 948
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 949 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 1005
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 1006 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1063
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1064 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1123
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1124 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1179
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1180 HKIRPHIATLRKYTYGKHI 1198
>gi|215768674|dbj|BAH00903.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 155/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E +
Sbjct: 550 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPT 609
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+ + + S+ +G I+K ++ V LD K + L +M
Sbjct: 610 QIKELADQLIGR---VLALSLQMYGCRVIQKAIEVVG-----LDQQTKMVAELDGHVMRC 661
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E I H + FI + L+ H GC + ++ P
Sbjct: 662 VRDQNGNHVIQKCIECIPQHAIQ--FIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTT 719
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 720 QQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNV 779
Query: 336 VQNCLKYR--ITVNYIVEEFLLN---SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + + ++ E L + S+ + + D++ NYV+Q L ET +
Sbjct: 780 IEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVL-ETCDDQQ---RE 835
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 836 AILTRIKAHLNTLKKYTYGKHI 857
>gi|332017050|gb|EGI57849.1| Maternal protein pumilio [Acromyrmex echinatior]
Length = 630
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 146/316 (46%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF + + ++ + + +V KF E ++
Sbjct: 268 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTQE 327
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++ P +++ L +
Sbjct: 328 QKSTLAQKVRGH---VLPLALQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKD 382
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + F+ A L+ H GC + ++ + + I
Sbjct: 383 QNGNHVVQKCIECV--EPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTAEQTQGI 440
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + L ++ GNYV+QHVLE P + S+RG + LS K S VV+ C
Sbjct: 441 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEKC 500
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE +D V D+Y NYV+Q +I+ P + L+ K+
Sbjct: 501 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQK-MIDVAEPAQRKV---LMHKI 556
Query: 397 QQNLDSLR-FGYGKHV 411
+ +L SLR + YGKH+
Sbjct: 557 RPHLGSLRKYTYGKHI 572
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++ + I +A SL + GNYV+Q E
Sbjct: 267 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTQ 326
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDK 367
T+ +RGH + L+L G V+Q L+ IV E + + D+
Sbjct: 327 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL---DGHVLKCVKDQ 383
Query: 368 YGNYVIQTALIETMRPNSLHL 388
GN+V+Q IE + P +L
Sbjct: 384 NGNHVVQK-CIECVEPRALQF 403
>gi|440896924|gb|ELR48715.1| Pumilio-like protein 1, partial [Bos grunniens mutus]
Length = 1192
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 857 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 916
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 917 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 973
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 974 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1031
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1032 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1091
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1092 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1147
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1148 HKIRPHIATLRKYTYGKHI 1166
>gi|281353340|gb|EFB28924.1| hypothetical protein PANDA_013254 [Ailuropoda melanoleuca]
Length = 1193
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 858 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 917
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 918 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 974
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 975 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1032
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1033 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1092
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1093 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1148
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1149 HKIRPHIATLRKYTYGKHI 1167
>gi|12082247|dbj|BAB20864.1| pumilio [Xenopus laevis]
Length = 576
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 158/330 (47%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + +V KF E + +
Sbjct: 241 IVEFSQDQHGSRFIQQKLERASPAERQLVFNEILQAAYQLMVDVIGNYVIQKFFEFGSLE 300
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 301 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKD 357
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 358 QNGNHVVQKCIECVQPQSLQ--FIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLPI 415
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 416 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 475
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 476 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 531
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 532 HKIRPHIATLRKYTYGKHILAKLEKYYMKN 561
>gi|449487299|ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 997
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 157/330 (47%), Gaps = 30/330 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + K+F + ++ + + +V KF E
Sbjct: 663 VIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTAS 722
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANR------PPLLDLVMKALKRLF 213
Q + Q++ + S+ +G I+K ++ V + L +MK ++
Sbjct: 723 QRKELAEQLSGH---VLPLSLQMYGCRVIQKALEVVDSEQQTQMVAELDGSIMKCVR--- 776
Query: 214 RLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
+ G+ V+ +C+E I + FI A L L+ H GC + ++
Sbjct: 777 -----DQNGNHVIQKCIECIPQE--RIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCDD 829
Query: 274 PRRKQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+QI+ I + L+++ GNYV+QHVLE P+ I L G + +S K
Sbjct: 830 SNTQQIIMDEIMQSVCLLAQDQYGNYVIQHVLEFGKPHERSVIISKLAGQIVKMSQQKFA 889
Query: 333 SFVVQNCLKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL + +V E L ++D+ + + D +GNYV+Q L E+ +SL
Sbjct: 890 SNVVEKCLTFGSPEERQLLVNEILGSTDENEPLQAMMKDPFGNYVVQKVL-ESCDDHSLE 948
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
L ++++++ +L+SL R+ YGKH+ + ++
Sbjct: 949 L---ILSRIRVHLNSLKRYTYGKHIVSRVE 975
>gi|350585831|ref|XP_003482060.1| PREDICTED: pumilio homolog 1 isoform 2 [Sus scrofa]
Length = 594
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 159/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 259 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 318
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 319 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 375
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 376 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 433
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 434 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 493
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 494 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 549
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 550 HKIRPHIATLRKYTYGKHILAKLEKYYMKN 579
>gi|158191|gb|AAB59189.1| pumilio protein [Drosophila melanogaster]
gi|384208|prf||1905306A pumilio gene
Length = 1533
Score = 90.5 bits (223), Expect = 1e-15, Method: Composition-based stats.
Identities = 77/316 (24%), Positives = 148/316 (46%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 1116 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 1175
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 1176 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 1230
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 1231 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 1288
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 1289 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1348
Query: 340 LKYRI---TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + I E N + + + D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 1349 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 1404
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 1405 RPHMAALRKYTYGKHI 1420
Score = 55.8 bits (133), Expect = 4e-05, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIR-KLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSS 224
LQ+ V+ S D+ GS I+ KL +A A ++ + L + L MT +
Sbjct: 1107 LQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMV--FSEILAAAYSL--MTDVFGN 1162
Query: 225 VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
V+Q + KN Q H L LA GC + ++ + ++++I++ +
Sbjct: 1163 YVIQKFFEFGTPEQKNTLGMQVK-GHVLQLALQMYGCRVIQKALESISPEQQQEIVHELD 1221
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
+ ++ +GN+VVQ +E DP ++ I + +G LS G V+Q L++
Sbjct: 1222 GHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT 1281
Query: 345 T--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I++E +++Q+ + D+YGNYVIQ L
Sbjct: 1282 AEQTTPILDELHEHTEQLIQ---DQYGNYVIQHVL 1313
>gi|16209558|gb|AAL14121.1| pumilio-like protein 1 [Xenopus laevis]
Length = 692
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 158/330 (47%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 357 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 416
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 417 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKD 473
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 474 QNGNHVVQKCIECVQPQSLQ--FIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLPI 531
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 532 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQDKFASNVVEKC 591
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 592 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 647
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 648 HKIRPHIATLRKYTYGKHILAKLEKYYMKN 677
>gi|218195953|gb|EEC78380.1| hypothetical protein OsI_18154 [Oryza sativa Indica Group]
Length = 862
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 155/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E +
Sbjct: 530 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPT 589
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+ + + S+ +G I+K ++ V LD K + L +M
Sbjct: 590 QIKELADQLIGR---VLALSLQMYGCRVIQKAIEVVG-----LDQQTKMVAELDGHVMRC 641
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E I H + FI + L+ H GC + ++ P
Sbjct: 642 VRDQNGNHVIQKCIECIPQHAIQ--FIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTT 699
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 700 QQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNV 759
Query: 336 VQNCLKYR--ITVNYIVEEFLLN---SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + + ++ E L + S+ + + D++ NYV+Q L ET +
Sbjct: 760 IEKCLAFGNPVERQILIGEMLGSTNESEHLEVMMKDQFANYVVQKVL-ETCDDQQ---RE 815
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 816 AILTRIKAHLNTLKKYTYGKHI 837
>gi|327286699|ref|XP_003228067.1| PREDICTED: pumilio homolog 1-like isoform 2 [Anolis carolinensis]
Length = 1091
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 756 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 815
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 816 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKD 872
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 873 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 930
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 931 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 990
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 991 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1046
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1047 HKIRPHIATLRKYTYGKHI 1065
>gi|348517676|ref|XP_003446359.1| PREDICTED: pumilio homolog 2 isoform 3 [Oreochromis niloticus]
Length = 1076
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q+KL VF + + +Q++ + + +V KF E + D
Sbjct: 743 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 802
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ D+V + + + +
Sbjct: 803 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQ-QSDIVRELDGHVLKCVK-D 857
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 858 QNGNHVVQKCIECV--QPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPI 915
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + ++ L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 916 LEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFASNVVEKC 975
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 976 VIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQR-MIDMAEPAQRKI---IM 1031
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1032 HKIRPHIATLRKYTYGKHI 1050
>gi|348517674|ref|XP_003446358.1| PREDICTED: pumilio homolog 2 isoform 2 [Oreochromis niloticus]
Length = 1188
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q+KL VF + + +Q++ + + +V KF E + D
Sbjct: 855 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 914
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ D+V + + + +
Sbjct: 915 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQ-QSDIVRELDGHVLKCVK-D 969
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 970 QNGNHVVQKCIECV--QPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPI 1027
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + ++ L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 1028 LEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFASNVVEKC 1087
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1088 VIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQR-MIDMAEPAQRKI---IM 1143
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1144 HKIRPHIATLRKYTYGKHI 1162
>gi|449449485|ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 996
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 157/330 (47%), Gaps = 30/330 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + K+F + ++ + + +V KF E
Sbjct: 663 VIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTAS 722
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANR------PPLLDLVMKALKRLF 213
Q + Q++ + S+ +G I+K ++ V + L +MK ++
Sbjct: 723 QRKELAEQLSGH---VLPLSLQMYGCRVIQKALEVVDSEQQTQMVAELDGSIMKCVR--- 776
Query: 214 RLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
+ G+ V+ +C+E I + FI A L L+ H GC + ++
Sbjct: 777 -----DQNGNHVIQKCIECIPQE--RIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCDD 829
Query: 274 PRRKQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+QI+ I + L+++ GNYV+QHVLE P+ I L G + +S K
Sbjct: 830 SNTQQIIMDEIMQSVCLLAQDQYGNYVIQHVLEFGKPHERSVIISKLAGQIVKMSQQKFA 889
Query: 333 SFVVQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL + +V E L ++D+ + + D +GNYV+Q L E+ +SL
Sbjct: 890 SNVVEKCLTFGSPEERQLLVNEILGSTDENEPLQAMMKDPFGNYVVQKVL-ESCDDHSLE 948
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
L ++++++ +L+SL R+ YGKH+ + ++
Sbjct: 949 L---ILSRIRVHLNSLKRYTYGKHIVSRVE 975
>gi|428168220|gb|EKX37168.1| hypothetical protein GUITHDRAFT_89808 [Guillardia theta CCMP2712]
Length = 505
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 155/333 (46%), Gaps = 25/333 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L++D+ G ++LQ++L LD +F+ V E ++ + + ++ K ++ CN +
Sbjct: 42 IFSLSRDQLGCRFLQKQLEENTQMSLDIIFSEVIERIVDLMTDPFGNYLCQKLLDYCNPE 101
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVAN----RPPLLDLVMKALKRLFRL 215
Q I ++ V S++ G+ + +KL++ + + + V+ LK
Sbjct: 102 QRAAIVSRVAPH---LVPISLNIHGTRAAQKLIERLGSDHYPTEAEIQAVVNHLKGGVIQ 158
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ VV +CL+++ +N+ FIY A +HC+ +A H GC +D +
Sbjct: 159 LIQDLNGNHVVQRCLQKLDAKHNQ--FIYDAVAQHCILVASHRHGCCVFQRCVDFATPEQ 216
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRG-------HYIDLSL 328
+ Q++ + L ++ GNYVVQ+VLE L+ +C S Y +
Sbjct: 217 KHQVVMQVVEKTVQLVQDQYGNYVVQYVLEQVTFLLL--VCASSHSPPTYQVPAYRPNIV 274
Query: 329 TKCGSFVVQNCLKYRITVN-YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLH 387
K S VV+ CL+ ++ L +QI + D Y NYVIQ AL P
Sbjct: 275 QKFSSNVVEKCLQLASPEGQALMVTQLAQKEQILSLLQDPYANYVIQRALQVATSPQL-- 332
Query: 388 LHQRLVTKLQQNLDSLR-FGYGKHVYNFI-KDC 418
+ L+ ++ +L ++R YG+ + + + K C
Sbjct: 333 --EMLLDAIKPHLSAIRNTSYGRKIQSRVSKRC 363
>gi|301099064|ref|XP_002898624.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105049|gb|EEY63101.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 907
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 144/313 (46%), Gaps = 42/313 (13%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFL-DKVFNVVSEFTFQIICNQYARFVFGKFIETCNE 158
+ +++D+ G + LQE+L D L D ++ E +++ + + ++F K +E E
Sbjct: 467 VFAMSKDQNGCRLLQEQLDYEDRGDLCDVIYQESLEHLAEMMVDPFGNYLFQKLLERVKE 526
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVAN--------------------- 197
Q L I +++S V A+++ G+ S++K+++ A
Sbjct: 527 KQRLVIIRRVSSN---LVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYE 583
Query: 198 -RP---------PLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAA 247
RP L DL+++ALK L + G+ V+ + L+ + N F++ A
Sbjct: 584 ERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQ--FMKPEYNQFVFDAV 641
Query: 248 LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELE 307
+ C + H GC + +D ++ +++ + A L ++ GNYVVQ+VL+
Sbjct: 642 CKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSC 701
Query: 308 DPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY---RITVNYIVEEFLLNSDQIFRVA 364
+ GH +LS+ K S V++ CL+ R+ YI E + + ++ ++
Sbjct: 702 TAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAE--ITSCPKMNKML 759
Query: 365 CDKYGNYVIQTAL 377
D++ NYV+Q AL
Sbjct: 760 QDQFANYVVQRAL 772
>gi|61098182|ref|NP_001012858.1| pumilio homolog 1 [Gallus gallus]
gi|60098393|emb|CAH65027.1| hypothetical protein RCJMB04_1f11 [Gallus gallus]
Length = 1093
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 758 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 817
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 818 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKD 874
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 875 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 932
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 933 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 992
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 993 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1048
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1049 HKIRPHIATLRKYTYGKHI 1067
>gi|148229513|ref|NP_001081119.1| pumilio homolog 1 [Xenopus laevis]
gi|51513460|gb|AAH80379.1| Pum1-A protein [Xenopus laevis]
Length = 1190
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 855 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 914
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 915 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKD 971
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 972 QNGNHVVQKCIECVQPQSLQ--FIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1029
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1030 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1089
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1090 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1145
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1146 HKIRPHIATLRKYTYGKHI 1164
>gi|334329171|ref|XP_003341193.1| PREDICTED: pumilio homolog 1 isoform 2 [Monodelphis domestica]
Length = 1094
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 759 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 818
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 819 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKD 875
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 876 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 933
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 934 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 993
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 994 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1049
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1050 HKIRPHIATLRKYTYGKHI 1068
>gi|395526794|ref|XP_003765541.1| PREDICTED: pumilio homolog 1 isoform 2 [Sarcophilus harrisii]
Length = 1094
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 759 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 818
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 819 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKD 875
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 876 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 933
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 934 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 993
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 994 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1049
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1050 HKIRPHIATLRKYTYGKHI 1068
>gi|444318131|ref|XP_004179723.1| hypothetical protein TBLA_0C04040 [Tetrapisispora blattae CBS 6284]
gi|387512764|emb|CCH60204.1| hypothetical protein TBLA_0C04040 [Tetrapisispora blattae CBS 6284]
Length = 870
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 143/285 (50%), Gaps = 14/285 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I + D+ G ++LQ++L D +FN + T +++ + + ++ K +E +
Sbjct: 550 IYSICTDQYGCRFLQKQLDVLGKEAADIIFNETKDHTVELMTDSFGNYLIQKLLERITLE 609
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + I I+S FV+ +++ G+ +++KL++ ++++K+L +L
Sbjct: 610 QRI-IIANISSPH--FVEIALNPHGTRALQKLVECTETDE-ESNIIVKSLTPSILMLSKD 665
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ VV +CL+++ + + FI+ AA + + +A H GC + +D +R +
Sbjct: 666 LNGNHVVQKCLQKMPPKHFQ--FIFDAACKDFIEIATHRHGCCVLQRCLDHGTEEQRHSL 723
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFV 335
+ N L+ + GNYVVQ+V+ E + Y I L+ I LSL K GS V
Sbjct: 724 CNKLLENIDMLTMDPFGNYVVQYVITKESDDNKYDFTYKIVHLLKPKVIVLSLHKFGSNV 783
Query: 336 VQNCLKYRITVNYIVEEFLLNSD---QIFRVACDKYGNYVIQTAL 377
V+ L+ I ++ E LLN + +I + D YGNYV+QTAL
Sbjct: 784 VEKLLRTPIVSETVILE-LLNKESNQEIQTLLNDSYGNYVLQTAL 827
>gi|348513123|ref|XP_003444092.1| PREDICTED: pumilio homolog 1-like [Oreochromis niloticus]
Length = 1163
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 158/330 (47%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL S VF+ + + +Q++ + + +V KF E + D
Sbjct: 828 IMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD 887
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + ++ +++ L +
Sbjct: 888 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKD 944
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + H FI +A L+ H GC + ++ + I
Sbjct: 945 QNGNHVVQKCIECVQPH--ALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1002
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE I +RG+ + LS K S VV+ C
Sbjct: 1003 LEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKC 1062
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E ++ ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1063 VTHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQK-MIDVAEPTQRKI---VM 1118
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 1119 HKIRPHISTLRKYTYGKHILAKLEKYYMKN 1148
>gi|28804566|dbj|BAC57980.1| Pumilio [Xenopus laevis]
Length = 1185
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 850 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 909
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 910 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKD 966
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 967 QNGNHVVQKCIECVQPQSLQ--FIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1024
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1025 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1084
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1085 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1140
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1141 HKIRPHIATLRKYTYGKHI 1159
>gi|449459894|ref|XP_004147681.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
gi|449503257|ref|XP_004161912.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1016
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 152/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ + D+ GS+++Q+KL + D VF+ + ++ + + +V KF E
Sbjct: 682 VFEFSSDQYGSRFIQQKLETASVEEKDMVFHEIMPQALSLMTDVFGNYVVQKFFEHGTAS 741
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+ + S+ +G I+K ++ V +D K + L +M
Sbjct: 742 QIRELADQLNGH---VLALSLQMYGCRVIQKAIEVVD-----VDQQTKMVTELDGQIMRC 793
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ VV +C+E I + FI + + L+ H GC + ++ P+
Sbjct: 794 VRDQNGNHVVQKCIECIPEEAIQ--FIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHNPKT 851
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ I+ I + +L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 852 QHIMMDEILQSVCTLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNV 911
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + + +V E L +D+ + + D++ NYV+Q L ET L L
Sbjct: 912 IEKCLTFGTSAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVL-ETCDDQQLEL-- 968
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++ +++ +L++L ++ YGKH+
Sbjct: 969 -ILNRIKVHLNALKKYTYGKHI 989
>gi|347970897|ref|XP_003436658.1| AGAP003914-PB [Anopheles gambiae str. PEST]
gi|333469539|gb|EGK97332.1| AGAP003914-PB [Anopheles gambiae str. PEST]
Length = 1378
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 147/316 (46%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL S VFN + + ++ + + +V KF E + +
Sbjct: 938 IVEFSQDQHGSRFIQQKLERAISVEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEFGSPE 997
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q+ + ++ +G I+K ++++ +++ L +
Sbjct: 998 QKQALAQQVKGH---VLPLALQMYGCRVIQKALESIPAE--QQQEIVRELDGHVLKCVKD 1052
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 1053 QNGNHVVQKCIECV--DPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQTAPI 1110
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + N L ++ GNYV+QHVLE P + S+RG + LS K S VV+ C
Sbjct: 1111 LAELHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKFASNVVEKC 1170
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE +D V D+Y NYV+Q +I+ P + L+ K+
Sbjct: 1171 VTHATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQK-MIDVSEPTQRKV---LLHKI 1226
Query: 397 QQNLDSL-RFGYGKHV 411
+ +++SL ++ YGKH+
Sbjct: 1227 RPHMNSLKKYTYGKHI 1242
>gi|387017906|gb|AFJ51071.1| Pumilio homolog 1-like [Crotalus adamanteus]
Length = 1185
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 850 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 909
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 910 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKD 966
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 967 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1024
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1025 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1084
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1085 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1140
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1141 HKIRPHIATLRKYTYGKHI 1159
>gi|123913364|sp|Q2VB19.1|PUM1_CHICK RecName: Full=Pumilio homolog 1
gi|82569972|gb|ABB83588.1| pumilio 1 [Gallus gallus]
Length = 1189
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 913
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 914 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKD 970
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 971 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1028
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1029 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1088
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1089 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1144
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1145 HKIRPHIATLRKYTYGKHI 1163
>gi|328353330|emb|CCA39728.1| Pumilio homolog 1 [Komagataella pastoris CBS 7435]
Length = 600
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 155/311 (49%), Gaps = 26/311 (8%)
Query: 89 ANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFV 148
+ PF+ + I+ L++D+ G ++LQ KL + + +F + +++ + + ++
Sbjct: 221 STPFEALTDE-IVSLSKDQYGCRFLQRKLDENSTMYFPTIFGQICAHASELMVDPFGNYL 279
Query: 149 FGKFIETC--NEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVM 206
K + C +E LL L+ ++ D V ++++ G+ +++K++ + LV
Sbjct: 280 VQKLLNYCTNHEKDLL---LEQSAPDLFSV--ALNQHGTRALQKIIDCLGTNYQF-SLVR 333
Query: 207 KALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNN 266
+LK L+ G+ VV +C+ + H + + FI A H + ++ H+ GC +
Sbjct: 334 DSLKNHVVELIQDLNGNHVVQKCINKFSHKDFQ--FIIDAICLHIVRISTHKHGCCVLQK 391
Query: 267 FIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
+++ + Q+ I NA L ++ GNYVVQ++L + + + E + + + L
Sbjct: 392 CLNKCNQQQLVQLGDEIIANAIVLMKDQFGNYVVQYLLSMNNLPINEKLVYQILPSISML 451
Query: 327 SLTKCGSFVVQNCLK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA------- 376
S+ K S V++ CLK R + N ++EE +L + + D+YGNYV+QTA
Sbjct: 452 SVQKFSSNVMEKCLKNAPNRSSQNAMLEE-ILRPQNLNALIKDQYGNYVVQTAIDVADDE 510
Query: 377 ----LIETMRP 383
LI+T++P
Sbjct: 511 YKFRLIQTVKP 521
>gi|313471417|sp|Q9XI17.2|PUM20_ARATH RecName: Full=Putative pumilio homolog 20; Short=APUM-20;
Short=AtPUM20
Length = 332
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 133/267 (49%), Gaps = 10/267 (3%)
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
+ I ++ +L + +TS F+ + + GS I+KL+ + L A+
Sbjct: 70 QMISKLDQRKLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTDDVDALF---AAAIL 126
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
R F ++ K S VV + + K +Y+ L + ++A + G + +N+ I +
Sbjct: 127 RRFLHIITDKYASYVVRRGMTVF--DKKKKKAMYEHILHYASHIARDKHGNLALNDIITD 184
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
R ++ +I+ A LS + GN+V+Q VL+L D I SLRGH++DLS K
Sbjct: 185 ---AYRNKLFDVIAHKALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQK 241
Query: 331 CGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPN-SLHL 388
GS+VV L+ + ++ +VEE + D + R+A ++YGN+++ AL T + L
Sbjct: 242 YGSYVVDVLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKEMVRTDL 301
Query: 389 HQRLVTKLQQNLDSLRFGYGKHVYNFI 415
LV KL+ + LR+ GK++ + +
Sbjct: 302 FWGLVHKLKPFHNLLRWSRGKNIASIL 328
>gi|347970899|ref|XP_318367.5| AGAP003914-PA [Anopheles gambiae str. PEST]
gi|347970901|ref|XP_003436659.1| AGAP003914-PC [Anopheles gambiae str. PEST]
gi|333469538|gb|EAA13588.5| AGAP003914-PA [Anopheles gambiae str. PEST]
gi|333469540|gb|EGK97333.1| AGAP003914-PC [Anopheles gambiae str. PEST]
Length = 869
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 147/316 (46%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL S VFN + + ++ + + +V KF E + +
Sbjct: 429 IVEFSQDQHGSRFIQQKLERAISVEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEFGSPE 488
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q+ + ++ +G I+K ++++ +++ L +
Sbjct: 489 QKQALAQQVKGH---VLPLALQMYGCRVIQKALESIPAE--QQQEIVRELDGHVLKCVKD 543
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 544 QNGNHVVQKCIECV--DPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQTAPI 601
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + N L ++ GNYV+QHVLE P + S+RG + LS K S VV+ C
Sbjct: 602 LAELHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKFASNVVEKC 661
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE +D V D+Y NYV+Q +I+ P + L+ K+
Sbjct: 662 VTHATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQK-MIDVSEPTQRKV---LLHKI 717
Query: 397 QQNLDSL-RFGYGKHV 411
+ +++SL ++ YGKH+
Sbjct: 718 RPHMNSLKKYTYGKHI 733
>gi|170063110|ref|XP_001866961.1| pumilio [Culex quinquefasciatus]
gi|167880847|gb|EDS44230.1| pumilio [Culex quinquefasciatus]
Length = 852
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 147/316 (46%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VFN + + ++ + + +V KF E + +
Sbjct: 449 IVEFSQDQHGSRFIQQKLERATAAEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEFGSPE 508
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q+ + ++ +G I+K ++++ +++ L +
Sbjct: 509 QKQALAQQVKGH---VLPLALQMYGCRVIQKALESIPAE--QQQEIVRELDGHVLKCVKD 563
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 564 QNGNHVVQKCIECV--DPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTQEQTAPI 621
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + N L ++ GNYV+QHVLE P + ++RG + LS K S VV+ C
Sbjct: 622 LGELHANTEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQHKFASNVVEKC 681
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE +D V D+Y NYV+Q +I+ P + L+ K+
Sbjct: 682 VTHATRAERALLIEEVCSFNDAGLHVMMKDQYANYVVQK-MIDVSEPTQRKV---LLHKI 737
Query: 397 QQNLDSL-RFGYGKHV 411
+ +++SL ++ YGKH+
Sbjct: 738 RPHMNSLKKYTYGKHI 753
>gi|299883578|emb|CBD70070.1| pumilio-related protein [Pelophylax lessonae]
Length = 1204
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 869 IIEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 928
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 929 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINDMVRELDGHVLKCVKD 985
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 986 QNGNHVVQKCIECVQPQSLQ--FIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1043
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1044 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1103
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1104 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1159
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1160 HKIRPHIATLRKYTYGKHI 1178
>gi|355714560|gb|AES05044.1| pumilio-like protein 1 [Mustela putorius furo]
Length = 1208
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 874 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 933
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 934 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 990
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + +
Sbjct: 991 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPV 1048
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1049 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1108
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1109 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1164
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1165 HKIRPHIATLRKYTYGKHI 1183
>gi|254571113|ref|XP_002492666.1| Member of the PUF protein family, which is defined by the presence
of Pumilio homology domains [Komagataella pastoris
GS115]
gi|238032464|emb|CAY70487.1| Member of the PUF protein family, which is defined by the presence
of Pumilio homology domains [Komagataella pastoris
GS115]
Length = 588
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 155/311 (49%), Gaps = 26/311 (8%)
Query: 89 ANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFV 148
+ PF+ + I+ L++D+ G ++LQ KL + + +F + +++ + + ++
Sbjct: 209 STPFEALTDE-IVSLSKDQYGCRFLQRKLDENSTMYFPTIFGQICAHASELMVDPFGNYL 267
Query: 149 FGKFIETC--NEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVM 206
K + C +E LL L+ ++ D V ++++ G+ +++K++ + LV
Sbjct: 268 VQKLLNYCTNHEKDLL---LEQSAPDLFSV--ALNQHGTRALQKIIDCLGTNYQF-SLVR 321
Query: 207 KALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNN 266
+LK L+ G+ VV +C+ + H + + FI A H + ++ H+ GC +
Sbjct: 322 DSLKNHVVELIQDLNGNHVVQKCINKFSHKDFQ--FIIDAICLHIVRISTHKHGCCVLQK 379
Query: 267 FIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
+++ + Q+ I NA L ++ GNYVVQ++L + + + E + + + L
Sbjct: 380 CLNKCNQQQLVQLGDEIIANAIVLMKDQFGNYVVQYLLSMNNLPINEKLVYQILPSISML 439
Query: 327 SLTKCGSFVVQNCLK---YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA------- 376
S+ K S V++ CLK R + N ++EE +L + + D+YGNYV+QTA
Sbjct: 440 SVQKFSSNVMEKCLKNAPNRSSQNAMLEE-ILRPQNLNALIKDQYGNYVVQTAIDVADDE 498
Query: 377 ----LIETMRP 383
LI+T++P
Sbjct: 499 YKFRLIQTVKP 509
>gi|242054955|ref|XP_002456623.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
gi|241928598|gb|EES01743.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
Length = 1057
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 154/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + VF + ++ + + +V KF E + +
Sbjct: 727 VVEFSADQYGSRFIQQKLETATVEEKNMVFEEIMPHALSLMTDVFGNYVVQKFFEHGSAE 786
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD K + L +M
Sbjct: 787 QRRELADKLLGH---VLALSLQMYGCRVIQKAIEVVD-----LDQKTKMVTELDGHIMKC 838
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + + FI H + L+ H GC + ++ P+
Sbjct: 839 VRDQNGNHVIQKCIECVPEDSIQ--FIISTFYGHVVPLSTHPYGCRVIQRVLEHCADPKT 896
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+++ GNYVVQHVLE P+ I L G I +S K S V
Sbjct: 897 QQIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQMSQQKFASNV 956
Query: 336 VQNCLKYRITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + ++ E L +D+ + + D++GNYV+Q L ET L
Sbjct: 957 VEKCLTFGGATEREVLISEMLGTTDENEPLQAMMKDQFGNYVVQKVL-ETCDDQQREL-- 1013
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++++++ +L++L ++ YGKH+
Sbjct: 1014 -ILSRVKVHLNALKKYTYGKHI 1034
>gi|18416639|ref|NP_567733.1| pumilio 6 protein [Arabidopsis thaliana]
gi|75168940|sp|Q9C5E7.1|PUM6_ARATH RecName: Full=Pumilio homolog 6, chloroplastic; Short=APUM-6;
Short=AtPUM6; Flags: Precursor
gi|13430772|gb|AAK26008.1|AF360298_1 putative pumilio protein [Arabidopsis thaliana]
gi|22136912|gb|AAM91800.1| putative pumilio protein [Arabidopsis thaliana]
gi|227206416|dbj|BAH57263.1| AT4G25880 [Arabidopsis thaliana]
gi|332659727|gb|AEE85127.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 861
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 155/335 (46%), Gaps = 30/335 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + VF + +++ + + +V KF E N
Sbjct: 537 IVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNST 596
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q+ Q V S+ +G I+K + + P + + L +
Sbjct: 597 QRKELADQLMGQ---IVPLSLQMYGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRD 651
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR--- 276
+ G+ V+ +C+E I +K F+ A L+ H GC + ++ +
Sbjct: 652 QNGNHVIQKCIENI--PADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRF 709
Query: 277 --KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
++IL + V LS++ GNYV QHVLE E I L GH + LSL K S
Sbjct: 710 ITEEILESVCV----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASN 765
Query: 335 VVQNCLKY--RITVNYIVEEFLLNSD---QIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
V++ CL+Y R+ + I++E + + + D+YGNYV+Q + ET +
Sbjct: 766 VIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQK-IFETCTAD----- 819
Query: 390 QRLV--TKLQQNLDSL-RFGYGKHVYNFIKDCDLQ 421
QRL ++++ + +L ++ YGKH+ + ++ ++
Sbjct: 820 QRLTLFSRVRMHASALKKYTYGKHIVSRLEQPSIE 854
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ K + + I +A L + GNYV+Q E +
Sbjct: 536 HIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNS 595
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ + L G + LSL G V+Q L I + V Q+ R D+ G
Sbjct: 596 TQRKELADQLMGQIVPLSLQMYGCRVIQKALDV-IEPDQRVRLARELDGQVMRCVRDQNG 654
Query: 370 NYVIQTAL 377
N+VIQ +
Sbjct: 655 NHVIQKCI 662
>gi|348675055|gb|EGZ14873.1| hypothetical protein PHYSODRAFT_545979 [Phytophthora sojae]
Length = 906
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 145/316 (45%), Gaps = 45/316 (14%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFL-DKVFNVVSEFTFQIICNQYARFVFGKFIETCNE 158
+ +++D+ G + LQE+L D L + ++ E +++ + + ++F K +E NE
Sbjct: 456 VFAMSKDQNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNE 515
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLL---------------- 202
Q L I +++S V A+++ G+ S++K+++ A P ++
Sbjct: 516 KQRLVIIRRVSSN---LVAAALNLHGTRSVQKVVEVCATSPDVIEEDYDDDDGDEYGYVN 572
Query: 203 ------------------DLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIY 244
D++++ALK L + G+ V+ + L+ + N F++
Sbjct: 573 DREERPEGGERRRTTSLPDIIVEALKDDAVRLCIDSNGNHVIQRALQ--FMKPEYNQFVF 630
Query: 245 QAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL 304
A + C + H GC + +D ++ +++ + A L ++ GNYVVQ+VL
Sbjct: 631 DAVCKECTTVGTHRHGCCVLQRCLDAANKAQKAEVIEQVERQAMKLMQDPYGNYVVQYVL 690
Query: 305 ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY---RITVNYIVEEFLLNSDQIF 361
+ + GH +LS+ K S V++ CL+ R+ YI E + + ++
Sbjct: 691 DSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAE--ITSCPKMN 748
Query: 362 RVACDKYGNYVIQTAL 377
++ D++ NYV+Q AL
Sbjct: 749 KMLQDQFANYVVQRAL 764
>gi|255566432|ref|XP_002524201.1| pumilio, putative [Ricinus communis]
gi|223536478|gb|EEF38125.1| pumilio, putative [Ricinus communis]
Length = 999
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 155/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + VFN + ++ + + +V KF E +
Sbjct: 668 VVEFSADQYGSRFIQQKLETATTEEKNMVFNEIMPQALSLMTDVFGNYVIQKFFEHGSAA 727
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+T + S+ +G I+K ++ V LD K + L +M
Sbjct: 728 QIRELADQLTGH---VLTLSLQMYGCRVIQKAIEVVE-----LDQQTKMVAELDGHIMRC 779
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + FI + + L+ H GC + ++ +
Sbjct: 780 VRDQNGNHVIQKCIECVPE--DAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHDAKT 837
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++I+ I + L+++ GNYVVQHVLE P+ +I L G + +S K S V
Sbjct: 838 QRIMMDEILQSVLMLAQDQYGNYVVQHVLEHGKPHERSSIIKKLTGQIVQMSQQKFASNV 897
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + +V E L +D+ + + D++ NYV+Q L ET L L
Sbjct: 898 IEKCLTFGTPAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVL-ETCDDQQLEL-- 954
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++ +++ +L++L ++ YGKH+
Sbjct: 955 -ILNRIKVHLNALKKYTYGKHI 975
>gi|307210859|gb|EFN87212.1| Maternal protein pumilio [Harpegnathos saltator]
Length = 627
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 146/316 (46%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF + + ++ + + +V KF E +
Sbjct: 268 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTPE 327
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++ P +++ L +
Sbjct: 328 QKSTLAQKVRGH---VLPLALQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKD 382
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + F+ A L+ H GC + ++ + + I
Sbjct: 383 QNGNHVVQKCIECV--EPRALQFVIGAFTGQVFALSTHPYGCRVIQRILEHCTPEQTQGI 440
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P + S+RG + LS K S VV+ C
Sbjct: 441 LQELHASTDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEKC 500
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE +D V D+Y NYV+Q +I+ P + L+ K+
Sbjct: 501 VTHATRQERAILIEEVCGFNDNALNVMMKDQYANYVVQK-MIDVAEPAQRKV---LMHKI 556
Query: 397 QQNLDSLR-FGYGKHV 411
+ +L SLR + YGKH+
Sbjct: 557 RPHLGSLRKYTYGKHI 572
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 6/141 (4%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++ + I +A SL + GNYV+Q E P
Sbjct: 267 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTP 326
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDK 367
T+ +RGH + L+L G V+Q L+ IV E + + D+
Sbjct: 327 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL---DGHVLKCVKDQ 383
Query: 368 YGNYVIQTALIETMRPNSLHL 388
GN+V+Q IE + P +L
Sbjct: 384 NGNHVVQKC-IECVEPRALQF 403
>gi|168278511|dbj|BAG11135.1| pumilio homolog 1 [synthetic construct]
Length = 1162
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q+ + + +V KF E + +
Sbjct: 827 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLNVDVFGNYVIQKFFEFGSLE 886
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 887 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 943
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 944 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1001
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1002 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1061
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1062 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1117
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1118 HKIRPHIATLRKYTYGKHI 1136
>gi|58257646|dbj|BAA07895.3| KIAA0099 protein [Homo sapiens]
Length = 1175
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q+ + + +V KF E + +
Sbjct: 840 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLNVDVFGNYVIQKFFEFGSLE 899
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 900 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 956
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 957 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1014
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1015 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1074
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1075 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1130
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1131 HKIRPHIATLRKYTYGKHI 1149
>gi|410910802|ref|XP_003968879.1| PREDICTED: pumilio homolog 1-like [Takifugu rubripes]
Length = 1162
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 157/330 (47%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL S VF+ + + +Q++ + + +V KF E + D
Sbjct: 827 IMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD 886
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + ++ +++ L +
Sbjct: 887 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKD 943
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + H FI A L+ H GC + ++ + I
Sbjct: 944 QNGNHVVQKCIECVQPH--ALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1001
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE I +RG+ + LS K S VV+ C
Sbjct: 1002 LEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKC 1061
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E ++ ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1062 VTHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQK-MIDVAEPTQRKI---VM 1117
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 1118 HKIRPHISTLRKYTYGKHILAKLEKYYMKN 1147
>gi|313229012|emb|CBY18164.1| unnamed protein product [Oikopleura dioica]
Length = 750
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 157/318 (49%), Gaps = 20/318 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q+KL + VFN + ++Q+I + + +V KF+E +
Sbjct: 427 MVEFSQDQHGSRFIQQKLERCNPSDRQLVFNEIISHSYQLIIDVFGNYVIQKFLEFGTAE 486
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I I + +Q S+ +G I+ ++++ + +++ L+ +
Sbjct: 487 QKQQIVDNIKGK---VLQLSLQMYGCRVIQTALESLNQEQQM--IIVNELQNSILRCVKD 541
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ + +E + N +FI A + L+ H GC + ++ + I
Sbjct: 542 QNGNHVIQKIIECLPADN--LEFIISAFNGQVVGLSTHAYGCRVVQRVLEHCTEEQYMPI 599
Query: 280 LYLISVNAASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ I N L ++ GNYV+QH+L ++ED + I ++ G + LS K S V+
Sbjct: 600 MEEIHKNHEMLIQDQYGNYVIQHILNRGKMED---RQMILRAVMGRIVTLSQHKFASNVI 656
Query: 337 QNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
+ C+ R ++EE + D +F + D++ NYV+Q L M ++ Q++V
Sbjct: 657 EKCVTTSNRTERALLIEEVCQSPDSLFIMMKDQFANYVVQKML--DMGDSA--QRQKMVQ 712
Query: 395 KLQQNLDSL-RFGYGKHV 411
K++ ++ +L RF YGKH+
Sbjct: 713 KMKPHVSNLKRFTYGKHI 730
>gi|340719709|ref|XP_003398290.1| PREDICTED: pumilio homolog 1-like [Bombus terrestris]
Length = 1239
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF + + ++ + + +V KF E +
Sbjct: 881 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTPE 940
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++ P +++ L +
Sbjct: 941 QKSTLAQKVRGH---VLPLALQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKD 995
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + F+ A L+ H GC + ++ + + I
Sbjct: 996 QNGNHVVQKCIECV--EPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGI 1053
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + L ++ GNYV+QHVLE P + S+RG + LS K S VV+ C
Sbjct: 1054 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKC 1113
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE +D V D+Y NYV+Q +I+ P + L+ K+
Sbjct: 1114 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQK-MIDVAEPAQRKV---LMHKI 1169
Query: 397 QQNLDSLR-FGYGKHV 411
+ +L SLR + YGKH+
Sbjct: 1170 RPHLGSLRKYTYGKHI 1185
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++ + I +A SL + GNYV+Q E P
Sbjct: 880 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTP 939
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDK 367
T+ +RGH + L+L G V+Q L+ IV E + + D+
Sbjct: 940 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL---DGHVLKCVKDQ 996
Query: 368 YGNYVIQTALIETMRPNSL 386
GN+V+Q IE + P +L
Sbjct: 997 NGNHVVQK-CIECVEPRAL 1014
>gi|68476406|ref|XP_717664.1| hypothetical protein CaO19.12836 [Candida albicans SC5314]
gi|46439384|gb|EAK98702.1| hypothetical protein CaO19.12836 [Candida albicans SC5314]
Length = 783
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 150/305 (49%), Gaps = 33/305 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
IL L +D+ G ++LQ +L + + L +FN + +++ + + ++ K N +
Sbjct: 448 ILTLCKDQHGCRFLQRELINETNATL--IFNEIYFKAVELMIDPFGNYLIQKLFTMINLE 505
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + Q + ++LF + ++D G+ S++KL+ V ++++ + L +L
Sbjct: 506 QRLVLINQCS--NELF-RIALDPHGTRSLQKLID-VIETNEEIEIITRNLYSNIVVLSRD 561
Query: 220 KPGSSVVLQCLEQI----------------YHHNNKNDFIYQAALEHCLYLACHEQGCIN 263
G+ VV + L + H N+N FI+ + LY+ACH GC
Sbjct: 562 LNGNHVVQKILTKFNTISSDSNSSDSNRDGVQHQNQNQFIFDIIQANLLYIACHRHGCCV 621
Query: 264 MNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL---------ELEDPYLIET 314
+ +D + +Q+ I+ + LS + GNYVVQ+VL + D +I+
Sbjct: 622 LQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVGGDAQNTDNQVIDI 681
Query: 315 ICFSLRGHYIDLSLTKCGSFVVQNCLKY-RITVNYIVEEFLLNSDQIF-RVACDKYGNYV 372
I ++ ++I LSL K GS V++ CLK I+ + I +L+ Q F ++ D +GNYV
Sbjct: 682 IIQEIKSNFIQLSLHKFGSNVIEKCLKISSISKDLIDNLIVLDHGQAFNQLLNDPFGNYV 741
Query: 373 IQTAL 377
+QT+L
Sbjct: 742 LQTSL 746
>gi|8778970|gb|AAF79885.1|AC021198_5 Contains similarity to a putative RNA-binding protein AAF18550
gi|6587864 from Arabidopsis thaliana BAC T11I11
gb|AC012680. It contains Pumilio-family RNA binding
domains PF|00806 [Arabidopsis thaliana]
Length = 559
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 157/337 (46%), Gaps = 48/337 (14%)
Query: 102 LLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
L+A+D+ G + LQ+ + G +F + + ++ + ++ K + +E+Q
Sbjct: 220 LMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKLLVVSDEEQR 279
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKP 221
I +TS+ + ++ ++ G+ I+K++K V + + LV AL+ F +L+
Sbjct: 280 TMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIA-LVKSALEPGFLVLVNDSN 338
Query: 222 GSSVVLQCLEQIYHHNNK-----------------------------NDFIYQAALEHCL 252
G V+ CLE + ++NK F+ +AA E+C
Sbjct: 339 GYHVLQSCLEFLVPNDNKLRLTKLSHILISFLLFLTYVSSDECCEIWCQFVVEAATEYCA 398
Query: 253 YLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLI 312
LA H+ GC + + G + ++++ IS ++ LS++ GNYVVQ +++ + +
Sbjct: 399 QLATHQYGCYVLQCSLINTVGLQHERLVAEISRDSLRLSQDPFGNYVVQCLIDQQVSSV- 457
Query: 313 ETICFSLRGHYIDLSLTKCGSFVVQNCL-KYRITVNYIVEEFLL--NSDQIFRVACDKYG 369
+ R H I+L+ K S V++ CL KY + IV E L N +Q+ + D Y
Sbjct: 458 -NLLLPFRTHCIELATQKFSSHVIEKCLRKYPESRAEIVRELLSYPNFEQLLQ---DPYA 513
Query: 370 NYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFG 406
NYVIQTAL T + RLV K++ RFG
Sbjct: 514 NYVIQTALSVTKGA----VRARLVEKVK------RFG 540
>gi|238880509|gb|EEQ44147.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 783
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 150/305 (49%), Gaps = 33/305 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
IL L +D+ G ++LQ +L + + L +FN + +++ + + ++ K N +
Sbjct: 448 ILTLCKDQHGCRFLQRELINETNATL--IFNEIYFKAVELMIDPFGNYLIQKLFTMINLE 505
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + Q + ++LF + ++D G+ S++KL+ V ++++ + L +L
Sbjct: 506 QRLVLINQCS--NELF-RIALDPHGTRSLQKLID-VIETNEEIEIITRNLYSNIVVLSRD 561
Query: 220 KPGSSVVLQCLEQI----------------YHHNNKNDFIYQAALEHCLYLACHEQGCIN 263
G+ VV + L + H N+N FI+ + LY+ACH GC
Sbjct: 562 LNGNHVVQKILTKFNTISSDSNSSDSNRDGAQHQNQNQFIFDIIQANLLYIACHRHGCCV 621
Query: 264 MNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL---------ELEDPYLIET 314
+ +D + +Q+ I+ + LS + GNYVVQ+VL + D +I+
Sbjct: 622 LQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVGGDAQNTDNQVIDI 681
Query: 315 ICFSLRGHYIDLSLTKCGSFVVQNCLKY-RITVNYIVEEFLLNSDQIF-RVACDKYGNYV 372
I ++ ++I LSL K GS V++ CLK I+ + I +L+ Q F ++ D +GNYV
Sbjct: 682 IIQEIKSNFIQLSLHKFGSNVIEKCLKISSISKDLIDNLIVLDHGQAFNQLLNDPFGNYV 741
Query: 373 IQTAL 377
+QT+L
Sbjct: 742 LQTSL 746
>gi|350400877|ref|XP_003485990.1| PREDICTED: pumilio homolog 1-like [Bombus impatiens]
Length = 1240
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF + + ++ + + +V KF E +
Sbjct: 882 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTPE 941
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++ P +++ L +
Sbjct: 942 QKSTLAQKVRGH---VLPLALQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKD 996
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + F+ A L+ H GC + ++ + + I
Sbjct: 997 QNGNHVVQKCIECV--EPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGI 1054
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + L ++ GNYV+QHVLE P + S+RG + LS K S VV+ C
Sbjct: 1055 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKC 1114
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE +D V D+Y NYV+Q +I+ P + L+ K+
Sbjct: 1115 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQK-MIDVAEPAQRKV---LMHKI 1170
Query: 397 QQNLDSLR-FGYGKHV 411
+ +L SLR + YGKH+
Sbjct: 1171 RPHLGSLRKYTYGKHI 1186
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++ + I +A SL + GNYV+Q E P
Sbjct: 881 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTP 940
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDK 367
T+ +RGH + L+L G V+Q L+ IV E + + D+
Sbjct: 941 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL---DGHVLKCVKDQ 997
Query: 368 YGNYVIQTALIETMRPNSL 386
GN+V+Q IE + P +L
Sbjct: 998 NGNHVVQK-CIECVEPRAL 1015
>gi|68476217|ref|XP_717758.1| hypothetical protein CaO19.5381 [Candida albicans SC5314]
gi|46439485|gb|EAK98802.1| hypothetical protein CaO19.5381 [Candida albicans SC5314]
Length = 783
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 150/305 (49%), Gaps = 33/305 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
IL L +D+ G ++LQ +L + + L +FN + +++ + + ++ K N +
Sbjct: 448 ILTLCKDQHGCRFLQRELINETNATL--IFNEIYFKAVELMIDPFGNYLIQKLFTMINLE 505
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + Q + ++LF + ++D G+ S++KL+ V ++++ + L +L
Sbjct: 506 QRLVLINQCS--NELF-RIALDPHGTRSLQKLID-VIETNEEIEIITRNLYSNIVVLSRD 561
Query: 220 KPGSSVVLQCLEQI----------------YHHNNKNDFIYQAALEHCLYLACHEQGCIN 263
G+ VV + L + H N+N FI+ + LY+ACH GC
Sbjct: 562 LNGNHVVQKILTKFNTISSDSNSSDSNRDGAQHQNQNQFIFDIIQANLLYIACHRHGCCV 621
Query: 264 MNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL---------ELEDPYLIET 314
+ +D + +Q+ I+ + LS + GNYVVQ+VL + D +I+
Sbjct: 622 LQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVGGDAQNTDNQVIDI 681
Query: 315 ICFSLRGHYIDLSLTKCGSFVVQNCLKY-RITVNYIVEEFLLNSDQIF-RVACDKYGNYV 372
I ++ ++I LSL K GS V++ CLK I+ + I +L+ Q F ++ D +GNYV
Sbjct: 682 IIQEIKSNFIQLSLHKFGSNVIEKCLKISSISKDLIDNLIVLDHGQAFNQLLNDPFGNYV 741
Query: 373 IQTAL 377
+QT+L
Sbjct: 742 LQTSL 746
>gi|328786740|ref|XP_391849.4| PREDICTED: pumilio homolog 2 [Apis mellifera]
Length = 1240
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF + + ++ + + +V KF E +
Sbjct: 882 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTPE 941
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++ P +++ L +
Sbjct: 942 QKSTLAQKVRGH---VLPLALQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKD 996
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + F+ A L+ H GC + ++ + + I
Sbjct: 997 QNGNHVVQKCIECV--EPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGI 1054
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + L ++ GNYV+QHVLE P + S+RG + LS K S VV+ C
Sbjct: 1055 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKC 1114
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE +D V D+Y NYV+Q +I+ P + L+ K+
Sbjct: 1115 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQK-MIDVAEPAQRKV---LMHKI 1170
Query: 397 QQNLDSLR-FGYGKHV 411
+ +L SLR + YGKH+
Sbjct: 1171 RPHLGSLRKYTYGKHI 1186
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++ + I +A SL + GNYV+Q E P
Sbjct: 881 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTP 940
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDK 367
T+ +RGH + L+L G V+Q L+ IV E + + D+
Sbjct: 941 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL---DGHVLKCVKDQ 997
Query: 368 YGNYVIQTALIETMRPNSL 386
GN+V+Q IE + P +L
Sbjct: 998 NGNHVVQK-CIECVEPRAL 1015
>gi|90074793|dbj|BAD95609.2| pumilio-1 [Oncorhynchus mykiss]
Length = 1159
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 157/330 (47%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL S VF+ + + +Q++ + + +V KF E + D
Sbjct: 824 IMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD 883
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + ++ +++ L +
Sbjct: 884 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKD 940
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + H FI A L+ H GC + ++ + I
Sbjct: 941 QNGNHVVQKCIECVQPH--ALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 998
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE I +RG+ + LS K S VV+ C
Sbjct: 999 LEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKC 1058
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E ++ ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1059 VSHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQK-MIDVAEPTQRKI---VM 1114
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 1115 HKIRPHISTLRKYTYGKHILAKLEKYYMKN 1144
>gi|380029756|ref|XP_003698531.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Apis florea]
Length = 1240
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF + + ++ + + +V KF E +
Sbjct: 882 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTPE 941
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++ P +++ L +
Sbjct: 942 QKSTLAQKVRGH---VLPLALQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKD 996
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + F+ A L+ H GC + ++ + + I
Sbjct: 997 QNGNHVVQKCIECV--EPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGI 1054
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + L ++ GNYV+QHVLE P + S+RG + LS K S VV+ C
Sbjct: 1055 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKC 1114
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE +D V D+Y NYV+Q +I+ P + L+ K+
Sbjct: 1115 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQK-MIDVAEPAQRKV---LMHKI 1170
Query: 397 QQNLDSLR-FGYGKHV 411
+ +L SLR + YGKH+
Sbjct: 1171 RPHLGSLRKYTYGKHI 1186
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++ + I +A SL + GNYV+Q E P
Sbjct: 881 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTP 940
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDK 367
T+ +RGH + L+L G V+Q L+ IV E + + D+
Sbjct: 941 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL---DGHVLKCVKDQ 997
Query: 368 YGNYVIQTALIETMRPNSL 386
GN+V+Q IE + P +L
Sbjct: 998 NGNHVVQK-CIECVEPRAL 1015
>gi|224112727|ref|XP_002316273.1| predicted protein [Populus trichocarpa]
gi|222865313|gb|EEF02444.1| predicted protein [Populus trichocarpa]
Length = 938
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 156/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + VF+ + ++ + + +V KF E +
Sbjct: 620 VVEFSADQYGSRFIQQKLETAMTEEKNMVFDEIMPQALSLMTDVFGNYVIQKFFEHGSAS 679
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+T + S+ +G I+K ++ V LD K + L +M
Sbjct: 680 QIRELADQLTGH---VLTLSLQMYGCRVIQKAIEVVE-----LDQQTKMVTELDGHIMRC 731
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + FI + + L+ H GC + ++ + +
Sbjct: 732 VRDQNGNHVIQKCIECVPE--DAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCQDTKT 789
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++I+ I + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 790 QRIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNV 849
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + +V+E L +D+ + + D++ NYV+Q L ET L L
Sbjct: 850 IEKCLTFGTPAERQALVDEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQLEL-- 906
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++ +++ +L++L ++ YGKH+
Sbjct: 907 -ILNRIKVHLNALKKYTYGKHI 927
>gi|185132391|ref|NP_001117710.1| pumilio-2 [Oncorhynchus mykiss]
gi|90991428|dbj|BAE93116.1| pumilio-2A [Oncorhynchus mykiss]
Length = 1184
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q+KL VF + + +Q++ + + +V KF E + D
Sbjct: 851 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 910
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ D+V + + + +
Sbjct: 911 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQ-QSDIVRELDGHVLKCVK-D 965
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 966 QNGNHVVQKCIECV--QPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPI 1023
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + ++ L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 1024 LEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLLLSQHKFASNVVEKC 1083
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1084 VIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQR-MIDMAEPAQRKI---IM 1139
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1140 HKIRPHIATLRKYTYGKHI 1158
>gi|71746472|ref|XP_822291.1| pumilio RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831959|gb|EAN77463.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 585
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 162/327 (49%), Gaps = 20/327 (6%)
Query: 103 LAQDEQGSQYLQEKL--TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
LA+D+ G ++LQ L D + + + +++ +QYA F+ K + +D
Sbjct: 228 LAKDQHGCRFLQRLLCDPEADCEIPRTIMSEIVPHVAELMTDQYANFLVQKLFDIMPKD- 286
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
+R ++ + ++ A + G+ S++K+++ +++R L+ ++ +AL + L+
Sbjct: 287 -VRYSVACVAAPKIAAIA-LTPHGTFSVQKMIETISSREELV-IIREALSKDVVRLVKDA 343
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ + + L Q++ ++K +F+Y A C+ +A ++QGC + ++ +R ++
Sbjct: 344 NGNHAIQKVL-QLFEPDDK-EFVYAAVAVDCITIAKNKQGCCVLQRCLEYASPAQRSTLV 401
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
I ++ + GNYV+Q+V+ D I+TI + H + L + K S V++ L
Sbjct: 402 RHILECCLQIAEDPYGNYVLQYVISAGDSKTIDTIAIAFLPHLVQLCMNKFSSNVMEKVL 461
Query: 341 KYRITVNYIVEEFLLNSDQIFRVAC----DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
V+ +V+E +++ VA D +GNYV+QTAL + + LV+ +
Sbjct: 462 ---CRVSPLVQEMYVDTMCTPEVAARLIQDDFGNYVLQTALTICTAGQA----EALVSVI 514
Query: 397 QQNLDSLR-FGYGKHVYNFIKDCDLQN 422
+ + S+R Y K + I+ L+N
Sbjct: 515 RPLMPSIRNTPYAKKLEGKIESAMLKN 541
>gi|383848137|ref|XP_003699708.1| PREDICTED: pumilio homolog 2-like [Megachile rotundata]
Length = 1241
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF + + ++ + + +V KF E +
Sbjct: 883 IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTPE 942
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++ P +++ L +
Sbjct: 943 QKSTLAQKVRGH---VLPLALQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKD 997
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + F+ A L+ H GC + ++ + + I
Sbjct: 998 QNGNHVVQKCIECV--EPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGI 1055
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + L ++ GNYV+QHVLE P + S+RG + LS K S VV+ C
Sbjct: 1056 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKTQLISSVRGKVLTLSQHKFASNVVEKC 1115
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R ++EE +D V D+Y NYV+Q +I+ P + L+ K+
Sbjct: 1116 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQK-MIDVAEPAQRKV---LMHKI 1171
Query: 397 QQNLDSLR-FGYGKHV 411
+ +L SLR + YGKH+
Sbjct: 1172 RPHLGSLRKYTYGKHI 1187
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++ + I +A SL + GNYV+Q E P
Sbjct: 882 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTP 941
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDK 367
T+ +RGH + L+L G V+Q L+ IV E + + D+
Sbjct: 942 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL---DGHVLKCVKDQ 998
Query: 368 YGNYVIQTALIETMRPNSL 386
GN+V+Q IE + P +L
Sbjct: 999 NGNHVVQK-CIECVEPRAL 1016
>gi|357472855|ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
gi|355507767|gb|AES88909.1| Pumilio-like protein [Medicago truncatula]
Length = 1025
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 174/372 (46%), Gaps = 36/372 (9%)
Query: 60 STVPNLSGTSNPQY-------ETITSSNFQTPLGFQANPFQHCANSG-ILLLAQDEQGSQ 111
S + NL+G P + E+ SS + +A F+ +G ++ + D+ GS+
Sbjct: 647 SGMRNLAGVMGPWHVDSGNMDESFASSLLEEFKSNKAKCFELSEIAGHVVEFSADQYGSR 706
Query: 112 YLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQ 171
++Q+KL + + + V+ + ++ + + +V KF E Q + ++
Sbjct: 707 FIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAPQRRELANKLIGH 766
Query: 172 DQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM---TKPGSSVVLQ 228
+ S+ +G I+K ++ V LD ++ +K L +M + G+ V+ +
Sbjct: 767 ---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVKELDGNIMRCVRDQNGNHVIQK 818
Query: 229 CLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAA 288
C+E + DFI + + L+ H GC + ++ + P +Q + + A
Sbjct: 819 CIECVPEE--AIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCESPATQQKVMDEILGAV 876
Query: 289 S-LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN 347
S L+++ GNYVVQHVLE P+ TI L G + +S K S VV+ CL +
Sbjct: 877 SMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKFASNVVEKCLTFSGPAE 936
Query: 348 Y--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQR--LVTKLQQNL 400
+V E L +D+ + + D++ NYV+Q L + HQR ++++++ +L
Sbjct: 937 RQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVL------ETCDDHQRELILSRIKVHL 990
Query: 401 DSL-RFGYGKHV 411
++L ++ YGKH+
Sbjct: 991 NALKKYTYGKHI 1002
>gi|296482387|tpg|DAA24502.1| TPA: pumilio homolog 2 [Bos taurus]
Length = 370
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 157/337 (46%), Gaps = 24/337 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 29 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 88
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 89 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQ--SEMVKELDGHVLKCVKD 143
Query: 220 KPGSSVVLQCLE-------QIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
+ G+ VV +C+E Q K FI + L+ H GC + ++
Sbjct: 144 QNGNHVVQKCIECVQPQSLQFIIDAFKGQFISSNCFK-VFVLSTHPYGCRVIQRILEHCT 202
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+ IL + + L ++ GNYV+QHVLE P I +RG + LS K
Sbjct: 203 AEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFA 262
Query: 333 SFVVQNCLKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSL 386
S VV+ C+ + R +++E +D ++ + D+Y NYV+Q +I+ P
Sbjct: 263 SNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQR 321
Query: 387 HLHQRLVTKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
+ ++ K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 322 KI---IMHKIRPHISTLRKYTYGKHILAKLEKYYLKN 355
>gi|297803524|ref|XP_002869646.1| hypothetical protein ARALYDRAFT_913980 [Arabidopsis lyrata subsp.
lyrata]
gi|297315482|gb|EFH45905.1| hypothetical protein ARALYDRAFT_913980 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 28/324 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + VF + +++ + + +V KF E N
Sbjct: 535 IVEFSADQHGSRFIQQKLENCKLEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSA 594
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q+ Q V S+ +G I+K + + P + + L +
Sbjct: 595 QRKELADQLMGQ---IVPLSLQMYGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRD 649
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR--- 276
+ G+ V+ +C+E I ++ F+ A L+ H GC + ++ +
Sbjct: 650 QNGNHVIQKCIENI--PADRVGFMLHAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRF 707
Query: 277 --KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
++IL + V LS++ GNYV QHVLE E I L GH + LSL K S
Sbjct: 708 ITEEILESVCV----LSKDQYGNYVTQHVLEKGTSEERERIVRKLSGHIVQLSLHKFASN 763
Query: 335 VVQNCLKY--RITVNYIVEEFLLNSDQIFR----VACDKYGNYVIQTALIETMRPNSLHL 388
V++ CL+Y RI + I++E + D+ + + D+YGNYV+Q + ET +
Sbjct: 764 VIEKCLEYGGRIERDLIIKE-IAGPDESYNSLLMMMKDQYGNYVVQK-IFETC---TADQ 818
Query: 389 HQRLVTKLQQNLDSL-RFGYGKHV 411
L ++++ + +L ++ YGKH+
Sbjct: 819 RATLFSRVRMHASALKKYTYGKHI 842
>gi|260813527|ref|XP_002601469.1| hypothetical protein BRAFLDRAFT_286861 [Branchiostoma floridae]
gi|229286765|gb|EEN57481.1| hypothetical protein BRAFLDRAFT_286861 [Branchiostoma floridae]
Length = 734
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 149/324 (45%), Gaps = 24/324 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q+KL VFN + +Q++ + + +V KF E +
Sbjct: 397 VVEFSQDQHGSRFIQQKLERATPAEKQMVFNEILSAAYQLMTDVFGNYVIQKFFEFGTPE 456
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDL-----VMKALKRLFR 214
Q + +I + ++ +G I+K ++ + PP L ++K L
Sbjct: 457 QKNALAQKIRGH---VLPLALQMYGCRVIQKALECI---PPDLKFSYQVELVKELDGHVL 510
Query: 215 LLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP 274
+ + G+ VV +C+E + ++ FI A L+ H GC + ++
Sbjct: 511 KCVKDQNGNHVVQKCIECV--DPSELQFIIDAFRGQVFALSTHPYGCRVIQRILEHCTVE 568
Query: 275 RRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
+ IL + N L ++ GNYV+QHVLE P I LRG + LS K S
Sbjct: 569 QTIPILEELHENTERLVQDQYGNYVIQHVLEHGRPEDKSKIVNELRGKVLALSQHKFASN 628
Query: 335 VVQNCLKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHL 388
VV+ C+ + R +++E D ++ + D++ NYV+Q +I+ P +
Sbjct: 629 VVEKCVSHSSRAERAMLIDEVCSYCDGTHSALYTMMKDQFANYVVQK-MIDVAEPQQRKI 687
Query: 389 HQRLVTKLQQNLDSLR-FGYGKHV 411
L+ K++ ++ +LR + YGKH+
Sbjct: 688 ---LMHKIRPHIATLRKYTYGKHI 708
>gi|115457242|ref|NP_001052221.1| Os04g0201200 [Oryza sativa Japonica Group]
gi|38345179|emb|CAE03335.2| OSJNBb0005B05.2 [Oryza sativa Japonica Group]
gi|113563792|dbj|BAF14135.1| Os04g0201200 [Oryza sativa Japonica Group]
Length = 795
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 187/415 (45%), Gaps = 48/415 (11%)
Query: 29 PSYSSFNEIHPSPPVPLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTP---L 85
PSY+ H P P + S +P L Q + SS+ +TP +
Sbjct: 359 PSYNDNILYHDGPRFPYSRMQRSGSHAYSHLRGIPYLG----DQQSRMLSSSRRTPGRNM 414
Query: 86 G---FQANPFQHCAN---------SG------------ILLLAQDEQGSQYLQEKLTSGD 121
G +Q NP +C + SG ++ ++ D+ GS+++Q+KL
Sbjct: 415 GSQIYQDNPVANCLDLSSLDLANRSGACPLELVNVVGHVMEVSMDQFGSRFIQQKLEVAS 474
Query: 122 SRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVD 181
+ +K+F + + + + +V KF E E QL ++ Q+ F+Q S
Sbjct: 475 ADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQLADQLRGH---FLQLSFQ 531
Query: 182 KFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKND 241
+G ++K++ V + ++ LK + + G+ V+ +C+E + +
Sbjct: 532 MYGCRVVQKVIDVVDLERKIS--IVGELKNSVLRCISDQNGNHVIQKCIECVPE--DHIP 587
Query: 242 FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR-RKQILYLISVNAASLSRNFSGNYVV 300
F+ + L+ L H+ GC + ++ P + ++ I A L+ + GNYVV
Sbjct: 588 FVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIVERAFDLTEDKFGNYVV 647
Query: 301 QHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSD 358
QHVLE P +I L G ++LS K S VV+ CL + ++ E +++S
Sbjct: 648 QHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGTPDEREGLIRE-IVSSG 706
Query: 359 QIFR-VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
Q F+ + D++GNYV+Q +++T L + +++ ++ +L+ L+ + +GKH+
Sbjct: 707 QTFQGLMKDQFGNYVVQR-ILQTCDDKFLVV---ILSSIKMHLNELKNYTFGKHI 757
>gi|90265098|emb|CAH67711.1| H0512B01.6 [Oryza sativa Indica Group]
Length = 795
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 187/415 (45%), Gaps = 48/415 (11%)
Query: 29 PSYSSFNEIHPSPPVPLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTP---L 85
PSY+ H P P + S +P L Q + SS+ +TP +
Sbjct: 359 PSYNDNILYHDGPRFPYSRMQRSGSHAYSHLRGIPYLG----DQQSRMLSSSRRTPGRNI 414
Query: 86 G---FQANPFQHCAN---------SG------------ILLLAQDEQGSQYLQEKLTSGD 121
G +Q NP +C + SG ++ ++ D+ GS+++Q+KL
Sbjct: 415 GSQIYQDNPVANCLDLSSLDLANRSGACPLELVNVVGHVMEVSMDQFGSRFIQQKLEVAS 474
Query: 122 SRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVD 181
+ +K+F + + + + +V KF E E QL ++ Q+ F+Q S
Sbjct: 475 ADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQLADQLRGH---FLQLSFQ 531
Query: 182 KFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKND 241
+G ++K++ V + ++ LK + + G+ V+ +C+E + +
Sbjct: 532 MYGCRVVQKVIDVVDLERKIS--IVGELKNSVLRCISDQNGNHVIQKCIECVPE--DHIP 587
Query: 242 FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR-RKQILYLISVNAASLSRNFSGNYVV 300
F+ + L+ L H+ GC + ++ P + ++ I A L+ + GNYVV
Sbjct: 588 FVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIVERAFDLTEDKFGNYVV 647
Query: 301 QHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSD 358
QHVLE P +I L G ++LS K S VV+ CL + ++ E +++S
Sbjct: 648 QHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGTPDEREGLIRE-IVSSG 706
Query: 359 QIFR-VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
Q F+ + D++GNYV+Q +++T L + +++ ++ +L+ L+ + +GKH+
Sbjct: 707 QTFQGLMKDQFGNYVVQR-ILQTCDDKFLVV---ILSSIKMHLNELKNYTFGKHI 757
>gi|357443169|ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatula]
gi|355480910|gb|AES62113.1| 60S ribosomal protein L4 [Medicago truncatula]
Length = 1176
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 161/339 (47%), Gaps = 35/339 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + K+F + ++ + + +V KF E +
Sbjct: 647 VVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTDS 706
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALKRLFRLLM 217
Q + Q+T + S+ +G I+K ++ V + ++ + A+ + R
Sbjct: 707 QRKELANQLTGH---VLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGAIMKCVR--- 760
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +C+E + N+ FI + + L+ H GC + ++ + +
Sbjct: 761 -DQNGNHVIQKCIESVPQ--NRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQ 817
Query: 278 QILYL-ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+I+ I + +L+++ GNYV+QH+LE P + L G + +S K S V+
Sbjct: 818 EIIMEEIMQSVCTLAQDQYGNYVIQHILEHGKPNERTIVISKLAGQIVKMSQQKFASNVI 877
Query: 337 QNCLKYRI--TVNYIVEEFLLNSD-----QIFRV----AC-------DKYGNYVIQTALI 378
+ CL + +V E L SD Q F+V AC D +GNYV+Q L
Sbjct: 878 EKCLAFGSPEERQILVNEMLGTSDENEPLQRFQVNDDMACNMQAMMKDPFGNYVVQKVL- 936
Query: 379 ETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
ET SL L ++++++ +L++L R+ YGKH+ + ++
Sbjct: 937 ETCDDQSLEL---ILSRIKVHLNALKRYTYGKHIVSRVE 972
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 1/144 (0%)
Query: 234 YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRN 293
+ +N F ++H + + + G + ++ + +I I +A +L +
Sbjct: 630 FKNNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTD 689
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEF 353
GNYV+Q E + + L GH + LSL G V+Q L+ + V+ +
Sbjct: 690 VFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEV-VDVDQQSQMV 748
Query: 354 LLNSDQIFRVACDKYGNYVIQTAL 377
S I + D+ GN+VIQ +
Sbjct: 749 SELSGAIMKCVRDQNGNHVIQKCI 772
>gi|354472363|ref|XP_003498409.1| PREDICTED: pumilio homolog 1 isoform 3 [Cricetulus griseus]
Length = 943
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 610 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 669
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 670 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 724
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 725 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 782
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 783 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 842
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 843 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 898
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 899 HKIRPHIATLRKYTYGKHILAKLEKYYMKN 928
>gi|308163019|gb|EFO65384.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia P15]
Length = 652
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 23/290 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTS--GDSRFLDKVFNVVSEFTFQ-----IICNQYARFVFGKF 152
++LL ++ G + LQ+ LT SR+L VF ++E+ ++ + + F K
Sbjct: 324 LVLLFKEPTGCKTLQQYLTDFPDKSRYLLDVF--IAEYNTPSLMEGLLIHPSGNYCFQKV 381
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVAN--RPPLLDLVMKALK 210
IE + Q L+I L I QD LF + + G+ SI+KL + V++ ++ +
Sbjct: 382 IEVSDASQRLKILLLI--QDSLF-EICHNLHGTRSIQKLFERVSSDEEKAIIAQQLGTGD 438
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
R+ +L++ G+ V +C+E + FIY + + ++ H+ GC + +D
Sbjct: 439 RIIKLIVDIN-GNHCVQRCIETFAPKDCT--FIYDQIIRELVLVSTHQHGCCIIQRCLDL 495
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFS-----LRGHYID 325
+R QI+ I + L + GNYV Q+ LE + L +I + GH
Sbjct: 496 CSEAQRVQIVTAIKTHVMELIVDRFGNYVFQYSLEKANNGLCGSISADDLIRPILGHEGS 555
Query: 326 LSLTKCGSFVVQNCLKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQ 374
L K S V+ CLKY + ++ E L+ SD +A DK+GNYVIQ
Sbjct: 556 LVSQKFSSHAVEKCLKYGSRKIRTLITENLMASDSFLSLAMDKFGNYVIQ 605
>gi|227430388|ref|NP_001153078.1| pumilio homolog 1 isoform 5 [Mus musculus]
Length = 944
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 611 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 670
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 671 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 725
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 726 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 783
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 784 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 843
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 844 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 899
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 900 HKIRPHIATLRKYTYGKHILAKLEKYYMKN 929
>gi|4539306|emb|CAB39609.1| pumilio-like protein [Arabidopsis thaliana]
gi|7269439|emb|CAB79443.1| pumilio-like protein [Arabidopsis thaliana]
Length = 849
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 154/335 (45%), Gaps = 30/335 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ + D+ GS+++Q+KL + VF + +++ + + +V KF E N
Sbjct: 525 LFPFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNST 584
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q+ Q V S+ +G I+K + + P + + L +
Sbjct: 585 QRKELADQLMGQ---IVPLSLQMYGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRD 639
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR--- 276
+ G+ V+ +C+E I +K F+ A L+ H GC + ++ +
Sbjct: 640 QNGNHVIQKCIENI--PADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRF 697
Query: 277 --KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
++IL + V LS++ GNYV QHVLE E I L GH + LSL K S
Sbjct: 698 ITEEILESVCV----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASN 753
Query: 335 VVQNCLKY--RITVNYIVEEFLLNSD---QIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
V++ CL+Y R+ + I++E + + + D+YGNYV+Q + ET +
Sbjct: 754 VIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQK-IFETCTAD----- 807
Query: 390 QRLV--TKLQQNLDSL-RFGYGKHVYNFIKDCDLQ 421
QRL ++++ + +L ++ YGKH+ + ++ ++
Sbjct: 808 QRLTLFSRVRMHASALKKYTYGKHIVSRLEQPSIE 842
>gi|348571016|ref|XP_003471292.1| PREDICTED: pumilio homolog 1-like isoform 3 [Cavia porcellus]
Length = 944
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 611 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 670
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 671 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 725
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 726 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 783
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 784 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 843
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 844 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 899
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 900 HKIRPHIATLRKYTYGKHILAKLEKYYMKN 929
>gi|342183779|emb|CCC93258.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 556
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 136/280 (48%), Gaps = 15/280 (5%)
Query: 104 AQDEQGSQYLQEKL--TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
A+D+ G +YLQ L + D + + + +++ +QYA F+ K + D
Sbjct: 201 AKDQHGCRYLQRLLCDSDPDKDIPRTIMSEIVPHVDELMTDQYANFLVQKLFDIMPADVR 260
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKP 221
L++ T ++ G+ S++K+++ ++++ L+ ++ +AL + L+
Sbjct: 261 LKVA---TVAAPKIAAIALKPHGTFSVQKMIETISSQEELV-IIREALSKDVVRLVKDAN 316
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G+ + + L++ H + +FIY A C+ +A ++QGC + ++ +R ++
Sbjct: 317 GNHAIQKVLQRFGHADK--EFIYAAVAADCVTIAKNKQGCCVLQRCLEHASPSQRSTLVR 374
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I ++ + GNYV+Q+V+ D I+TI + H + L + K S V++ L
Sbjct: 375 HILGCCLEIAEDPYGNYVLQYVISTGDNNTIDTIAIAFLPHLVQLCINKFSSNVMEKVLG 434
Query: 342 YRITVNYIVEEFLLNS----DQIFRVACDKYGNYVIQTAL 377
V+ V+E +N + R+ D +GNYV+QTAL
Sbjct: 435 ---RVSLPVQEMYVNKMCSPEVAARLIQDDFGNYVLQTAL 471
>gi|285026237|dbj|BAI68041.1| Pumilio2 [Danio rerio]
Length = 1206
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 157/345 (45%), Gaps = 44/345 (12%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q+KL S VF + + +Q++ + + +V KF E + D
Sbjct: 847 MVEFSQDQHGSRFIQQKLERATSAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 906
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ +++ L +
Sbjct: 907 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKD 963
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFID---------- 269
+ G+ VV +C+E + FI A L+ H GC + ++
Sbjct: 964 QNGNHVVQKCIECV--QPQAFQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPI 1021
Query: 270 --------EMKGPRRK--------QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIE 313
E G + + Q Y +S +A L ++ GNYV+QHVLE P
Sbjct: 1022 LEELHQHFEQLGQKYQGVSLEMTPQTYYTVSSDA--LFKDQYGNYVIQHVLEHGRPEDKS 1079
Query: 314 TICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSD----QIFRVACDK 367
I +RG + LS K S VV+ C+ + R +++E D ++ + D+
Sbjct: 1080 KIVAEVRGKVLALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQ 1139
Query: 368 YGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
Y NYV+Q +I+ P + ++ K++ ++ +LR + YGKH+
Sbjct: 1140 YANYVVQR-MIDMAEPAQRKI---IMHKIRPHIATLRKYTYGKHI 1180
>gi|225443381|ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|297735758|emb|CBI18445.3| unnamed protein product [Vitis vinifera]
Length = 1053
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL + VF V +++ + + +V KF E +Q +
Sbjct: 708 DQHGSRFIQQKLENCSGEEKASVFKEVLPHASRLMTDVFGNYVIQKFFEHGTPEQRRELA 767
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD----LVMKALKRLFRLLMMTKP 221
Q+ Q + S+ +G I+K ++ + LD LV + + R + +
Sbjct: 768 YQLAGQ---MIPLSLQMYGCRVIQKALEVIE-----LDQKTQLVHELDGHVIRCVR-DQN 818
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ-IL 280
G+ V+ +C+E I K FI A L+ H GC + ++ + Q I+
Sbjct: 819 GNHVIQKCIECI--PTEKIGFIISAFKGQVTVLSSHPYGCRVIQRVLEHCSEVSQSQFIV 876
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
I +A L+ + GNYV QHVLE +P+ I L G + +S K S V++ CL
Sbjct: 877 DEILESAYVLAEDQYGNYVTQHVLERGNPHERSQIISKLTGKIVQMSQHKYASNVIEKCL 936
Query: 341 KYRIT--VNYIVEEFLLNS---DQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
+Y T ++EE + S D + + D++ NYV+Q ++ET + L+ +
Sbjct: 937 EYGSTSECELLIEEIIGQSEDNDNLLVMMKDQFANYVVQK-ILETSNDKQREI---LLNR 992
Query: 396 LQQNLDSL-RFGYGKHV 411
++ +L++L ++ YGKH+
Sbjct: 993 IRVHLNALKKYTYGKHI 1009
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 1/141 (0%)
Query: 237 NNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSG 296
NN F + + + G + ++ G + + + +A+ L + G
Sbjct: 688 NNARKFELSDIAGRTVEFSVDQHGSRFIQQKLENCSGEEKASVFKEVLPHASRLMTDVFG 747
Query: 297 NYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLN 356
NYV+Q E P + + L G I LSL G V+Q L+ I ++ +
Sbjct: 748 NYVIQKFFEHGTPEQRRELAYQLAGQMIPLSLQMYGCRVIQKALEV-IELDQKTQLVHEL 806
Query: 357 SDQIFRVACDKYGNYVIQTAL 377
+ R D+ GN+VIQ +
Sbjct: 807 DGHVIRCVRDQNGNHVIQKCI 827
>gi|354472365|ref|XP_003498410.1| PREDICTED: pumilio homolog 1 isoform 4 [Cricetulus griseus]
Length = 1107
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 774 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 833
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 834 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 888
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 889 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 946
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 947 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1006
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1007 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1062
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1063 HKIRPHIATLRKYTYGKHI 1081
>gi|74184013|dbj|BAE37045.1| unnamed protein product [Mus musculus]
Length = 1108
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 775 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 834
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 835 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 889
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 890 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 947
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 948 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1007
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1008 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1063
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1064 HKIRPHIATLRKYTYGKHI 1082
>gi|354472359|ref|XP_003498407.1| PREDICTED: pumilio homolog 1 isoform 1 [Cricetulus griseus]
Length = 1185
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 852 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 911
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 912 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 966
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 967 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1024
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1025 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1084
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1085 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1140
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1141 HKIRPHIATLRKYTYGKHI 1159
>gi|348571012|ref|XP_003471290.1| PREDICTED: pumilio homolog 1-like isoform 1 [Cavia porcellus]
Length = 1186
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 967
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 968 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1025
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1026 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1086 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1141
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1142 HKIRPHIATLRKYTYGKHI 1160
>gi|227430382|ref|NP_001153075.1| pumilio homolog 1 isoform 2 [Mus musculus]
gi|29748037|gb|AAH50747.1| Pum1 protein [Mus musculus]
Length = 1186
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 967
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 968 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1025
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1026 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1086 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1141
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1142 HKIRPHIATLRKYTYGKHI 1160
>gi|334329173|ref|XP_003341194.1| PREDICTED: pumilio homolog 1 isoform 3 [Monodelphis domestica]
Length = 946
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 157/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 613 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 672
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + P + +++ L +
Sbjct: 673 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIP--PDQQNEMVRELDGHVLKCVKD 727
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 728 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 785
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 786 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 845
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 846 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 901
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 902 HKIRPHIATLRKYTYGKHILAKLEKYYMKN 931
>gi|395526796|ref|XP_003765542.1| PREDICTED: pumilio homolog 1 isoform 3 [Sarcophilus harrisii]
Length = 946
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 157/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 613 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 672
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + P + +++ L +
Sbjct: 673 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIP--PDQQNEMVRELDGHVLKCVKD 727
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 728 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 785
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 786 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 845
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 846 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 901
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 902 HKIRPHIATLRKYTYGKHILAKLEKYYMKN 931
>gi|74180360|dbj|BAE32346.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 759 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 818
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 819 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 873
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 874 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 931
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 932 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 991
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 992 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1047
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1048 HKIRPHIATLRKYTYGKHI 1066
>gi|357454231|ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula]
gi|87241276|gb|ABD33134.1| Nucleic acid binding NABP [Medicago truncatula]
gi|355486444|gb|AES67647.1| Pumilio-like protein [Medicago truncatula]
Length = 1047
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 157/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ ++ ++ + + +V KF E
Sbjct: 717 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKFFEHGLAS 776
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD +K ++ L +M
Sbjct: 777 QRRELANKLYGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIKMVQELDGNIMRC 828
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + DFI + + L+ H GC + ++ + P
Sbjct: 829 VRDQNGNHVIQKCIECVPE--DAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPDT 886
Query: 277 KQILYLISVNAAS-LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+Q + + A S L+++ GNYVVQHVLE P+ TI L G+ + +S K S V
Sbjct: 887 QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKFASNV 946
Query: 336 VQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 947 VEKCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 1003
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++++++ +L++L ++ YGKH+
Sbjct: 1004 -ILSRIKVHLNALKKYTYGKHI 1024
>gi|261872057|gb|ACY02862.1| pumilio 1, partial [Oryzias latipes]
Length = 1162
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 157/330 (47%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VF+ + + +Q++ + + +V KF E + D
Sbjct: 827 IMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD 886
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + ++ +++ L +
Sbjct: 887 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKD 943
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + H FI +A L+ H GC + ++ + I
Sbjct: 944 QNGNHVVQKCIECVQPH--ALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1001
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE I +RG+ + LS K S VV+ C
Sbjct: 1002 LEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKC 1061
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E ++ ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1062 VTHASRTERAMLIDEVCGLTEGPHSALYTMMKDQYANYVVQK-MIDVAEPTQRKI---VM 1117
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 1118 HKIRPHISTLRKYTYGKHILAKLEKYYMKN 1147
>gi|50302921|ref|XP_451398.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640529|emb|CAH02986.1| KLLA0A09097p [Kluyveromyces lactis]
Length = 805
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 14/286 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G ++LQ +L +++ + + +++ + + ++ K E N+
Sbjct: 484 IYSLCKDQHGCRFLQRQLDENGEEVASTIYSEIKDHICELMNDPFGNYLMQKLFERINQR 543
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ I + Q F+ ++D G+ +++KL++ LV + L
Sbjct: 544 DRVEIVKNCSPQ---FMDIALDAHGTRALQKLVECTDTEEETQILVASLQPSILSLSRDF 600
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
K + VV + LE N FIY AA + + ++ H GC + +D + +
Sbjct: 601 K-SNHVVQKMLENFS--NKDTQFIYDAACDDIIKISNHRNGCCVVQRCLDFGNTEQLDAL 657
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELE------DPYLIETICFSLRGHYIDLSLTKCGS 333
I + L+ N GNYV+Q++L E D + I L+ + IDLSL K GS
Sbjct: 658 CGKIVEKSFELTMNPYGNYVIQYILTKEKDQATPDFKYTKKIVDVLKFNAIDLSLNKFGS 717
Query: 334 FVVQNCLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTAL 377
VV++ L+ + ++ + L ++D+ + ++ D YGNYV+QTAL
Sbjct: 718 NVVESILRTPAVSDVMITKILNSNDESGLLKLLHDSYGNYVLQTAL 763
>gi|384488095|gb|EIE80275.1| hypothetical protein RO3G_04980 [Rhizopus delemar RA 99-880]
Length = 807
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 152/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S VF V Q++ + + +V KF E N+
Sbjct: 493 IVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKFFEHGNQM 552
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S+ +G ++K ++ V L + K +K L ++
Sbjct: 553 QKTILAKQMEGH---VLSLSLQMYGCRVVQKALEHV-----LTEQQAKLVKELDGCILKC 604
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A LA H GC + + +
Sbjct: 605 IKDQNGNHVIQKAIERVPAQHIQ--FIINAFHGQVYNLATHPYGCRVIQRMFEHCTENQT 662
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ +L + L ++ GNYV+QH+LE P + +RGH + LS K S VV
Sbjct: 663 EPLLDELHRCTGQLVQDQYGNYVIQHILERGRPVDKTFVIEKIRGHVLQLSKHKFASNVV 722
Query: 337 QNCLKY--RITVNYIVEEFLL-NSDQIFRVAC---DKYGNYVIQTALIETMRPNSLHLHQ 390
+ C+ + + ++EE L SD +A D+Y NYVIQ +++ + + L
Sbjct: 723 EKCVDFGSKRDRQLLIEEVLQPRSDGTLPLATMMKDQYANYVIQ-KMLDVVDDDQREL-- 779
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
LVTK++ +L L ++ YGKH+
Sbjct: 780 -LVTKIKPHLQFLKKYTYGKHL 800
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++ + + NA L + GNYV+Q E +
Sbjct: 492 HIVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKFFEHGNQ 551
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YIVEEFLLNSDQIFRVACDK 367
+ + GH + LSL G VVQ L++ +T +V+E I + D+
Sbjct: 552 MQKTILAKQMEGHVLSLSLQMYGCRVVQKALEHVLTEQQAKLVKEL---DGCILKCIKDQ 608
Query: 368 YGNYVIQTAL 377
GN+VIQ A+
Sbjct: 609 NGNHVIQKAI 618
>gi|432883258|ref|XP_004074234.1| PREDICTED: pumilio homolog 1 [Oryzias latipes]
Length = 1166
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 157/330 (47%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VF+ + + +Q++ + + +V KF E + D
Sbjct: 831 IMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD 890
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + ++ +++ L +
Sbjct: 891 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKD 947
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + H FI +A L+ H GC + ++ + I
Sbjct: 948 QNGNHVVQKCIECVQPH--ALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1005
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE I +RG+ + LS K S VV+ C
Sbjct: 1006 LEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKC 1065
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E ++ ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1066 VTHASRTERAMLIDEVCGLTEGPHSALYTMMKDQYANYVVQK-MIDVAEPTQRKI---VM 1121
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 1122 HKIRPHISTLRKYTYGKHILAKLEKYYMKN 1151
>gi|126330276|ref|XP_001367437.1| PREDICTED: pumilio homolog 1 isoform 1 [Monodelphis domestica]
Length = 1188
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 855 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 914
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + P + +++ L +
Sbjct: 915 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIP--PDQQNEMVRELDGHVLKCVKD 969
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 970 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1027
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1028 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1087
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1088 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1143
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1144 HKIRPHIATLRKYTYGKHI 1162
>gi|66815363|ref|XP_641698.1| hypothetical protein DDB_G0279557 [Dictyostelium discoideum AX4]
gi|60469729|gb|EAL67717.1| hypothetical protein DDB_G0279557 [Dictyostelium discoideum AX4]
Length = 782
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 141/279 (50%), Gaps = 9/279 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSG-DSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNE 158
I L + + G ++LQ+KL DS + +FN V + +++ + Y +++ + ++ C+
Sbjct: 475 IYHLTKYQAGCRFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQLMKYCDN 534
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
+Q +I +I + F + +G I+KL++ ++ P ++ ++ ++K L
Sbjct: 535 NQRRQIVDKIAPSVETF---ACHVYGIHGIQKLLQYLS--PDQVESIIASIKGKVIQLSK 589
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
G+ ++ L+Q N+ F+ A + + + H+ GC +N ID + ++
Sbjct: 590 DNKGNYLIQSFLKQFSPEVNQ--FVCDAIMGNIEEICTHKVGCTVVNRCIDNANPEQLEK 647
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
++ I+ ++ L ++ GNYVVQH+L Y + I SL+ + +LS+ K S V++
Sbjct: 648 LVDKITEHSLKLVQDQFGNYVVQHLLSKNKAYSSKLIV-SLKDNIAELSIQKFSSNVIEK 706
Query: 339 CLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
CL+ T Y + L I + DKY N+VIQTAL
Sbjct: 707 CLQLADTPTYELIIKALTEADILSLLQDKYANFVIQTAL 745
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 22/209 (10%)
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
LM+ G ++ Q ++ Y NN+ I ACH G + + + +
Sbjct: 515 LMIDPYGQYLIPQLMK--YCDNNQRRQIVDKIAPSVETFACHVYGIHGIQKLLQYLSPDQ 572
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ I+ I LS++ GNY++Q L+ P + + +C ++ G+ ++ K G V
Sbjct: 573 VESIIASIKGKVIQLSKDNKGNYLIQSFLKQFSPEVNQFVCDAIMGNIEEICTHKVGCTV 632
Query: 336 VQNCL------KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
V C+ + V+ I E L ++ D++GNYV+Q L + +S
Sbjct: 633 VNRCIDNANPEQLEKLVDKITEHSL-------KLVQDQFGNYVVQHLLSKNKAYSS---- 681
Query: 390 QRLVTKLQQNLDSLRFGYGKHVYNFIKDC 418
+L+ L+ N+ L K N I+ C
Sbjct: 682 -KLIVSLKDNIAELSI--QKFSSNVIEKC 707
>gi|74180929|dbj|BAE27746.1| unnamed protein product [Mus musculus]
Length = 944
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 157/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 611 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 670
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 671 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 725
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + + + I
Sbjct: 726 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILGHCLPDQTLPI 783
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 784 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 843
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 844 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 899
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 900 HKIRPHIATLRKYTYGKHILAKLEKYYMKN 929
>gi|395526792|ref|XP_003765540.1| PREDICTED: pumilio homolog 1 isoform 1 [Sarcophilus harrisii]
Length = 1188
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 855 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 914
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + P + +++ L +
Sbjct: 915 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIP--PDQQNEMVRELDGHVLKCVKD 969
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 970 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1027
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1028 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1087
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1088 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1143
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1144 HKIRPHIATLRKYTYGKHI 1162
>gi|148698189|gb|EDL30136.1| pumilio 1 (Drosophila), isoform CRA_c [Mus musculus]
Length = 1215
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 882 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 941
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 942 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 996
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 997 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1054
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1055 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1114
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1115 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1170
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1171 HKIRPHIATLRKYTYGKHI 1189
>gi|326506354|dbj|BAJ86495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 844
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 152/325 (46%), Gaps = 20/325 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + + VF V ++ + + +V KF E +
Sbjct: 520 IVDFSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFGNYVIQKFFEHGTPE 579
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ V S+ +G I+K ++ V +DLV + + R +
Sbjct: 580 QRRDLAAKLAGH---VVPLSLQMYGCRVIQKALE-VMELDQKIDLVRELDGNIMRCVR-D 634
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ- 278
+ G+ V+ +C+E + F+ A L+ H GC + ++ G R Q
Sbjct: 635 QNGNHVIQKCIECV--PTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQC 692
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
I+ I +A L+++ GNYV QHV+E + I L G + +S K S V++
Sbjct: 693 IIDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEK 752
Query: 339 CLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
C ++ + + IVE+ N D + + D+Y NYV+Q ++ET L L
Sbjct: 753 CFQHGDIAERDLLIREIVEQTDGN-DTLLAMMKDQYANYVVQ-KILETCNDEQREL---L 807
Query: 393 VTKLQQNLDSLR-FGYGKHVYNFIK 416
V++++ +L +LR + YGKH+ + ++
Sbjct: 808 VSRVKGHLQALRKYTYGKHIASRVE 832
>gi|224098451|ref|XP_002311179.1| predicted protein [Populus trichocarpa]
gi|222850999|gb|EEE88546.1| predicted protein [Populus trichocarpa]
Length = 999
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 156/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + VF+ + ++ + + +V KF E +
Sbjct: 667 VVEFSADQYGSRFIQQKLETATAEENNMVFDEIMPQALSLMTDVFGNYVIQKFFEHGSAS 726
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q+ + Q+T + S+ +G I+K ++ V LD K + L ++
Sbjct: 727 QIRELADQLTGH---VLTLSLQMYGCRVIQKAIEVVE-----LDQQTKMVTELNGHILRC 778
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + FI + + L+ H GC + ++ +
Sbjct: 779 VRDQNGNHVIQKCIECVPE--DAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHDTKT 836
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++I+ I + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 837 QRIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNV 896
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL + +V+E L +D+ + + D++ NYV+Q L ET L L
Sbjct: 897 IEKCLTFGTPAERQALVDEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQLGL-- 953
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++++++ +L++L ++ YGKH+
Sbjct: 954 -ILSRIKVHLNALKKYTYGKHI 974
>gi|327286697|ref|XP_003228066.1| PREDICTED: pumilio homolog 1-like isoform 1 [Anolis carolinensis]
Length = 1184
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 851 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 910
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + P + +++ L +
Sbjct: 911 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIP--PDQQNEMVRELDGHVLKCVKD 965
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 966 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1023
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1024 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1083
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1084 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1139
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1140 HKIRPHIATLRKYTYGKHI 1158
>gi|119182519|ref|XP_001242388.1| hypothetical protein CIMG_06284 [Coccidioides immitis RS]
Length = 1208
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL + +F +++ + + ++ K +E N++Q
Sbjct: 818 LCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSNDEQ-- 875
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V ++++ G+ +++K+++ ++ P V+KAL+ L+ G
Sbjct: 876 RTALINNAAPQL-VSIALNQHGTRALQKMIEFIST-PEQTQTVIKALRDKVVDLVQDLNG 933
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ A Q CI D G +R Q++
Sbjct: 934 NHVIQKCLNRLS--------------------AADAQRCI------DHASGDQRAQLIAQ 967
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I+ ++ +L ++ GNYVVQ++L+L +P E +C + G LS K S V++ CL+
Sbjct: 968 ITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCLR- 1026
Query: 343 RITVNYIVEEFLLNS----DQIFRVACDKYGNYVIQT-----------ALIETMRP 383
T ++ L+ +++ R+ D + NYV+QT ALIE +RP
Sbjct: 1027 --TADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAMDYADPETRVALIEAVRP 1080
>gi|413921572|gb|AFW61504.1| hypothetical protein ZEAMMB73_884166 [Zea mays]
Length = 986
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 154/325 (47%), Gaps = 20/325 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + + VF V ++ + + +V KF E +
Sbjct: 662 IIEYSADQHGSRFIQQKLENCTAEEKAYVFAEVLPHASSLMTDVFGNYVIQKFFEHGTRE 721
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + S+ +G I+K ++ V +DLV + + R +
Sbjct: 722 QRRDLATKLVGH---VLPLSLQMYGCRVIQKALE-VMELDQKIDLVHELDGHVMRCVR-D 776
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ- 278
+ G+ V+ +C+E + F+ A L+ H GC + ++ G + Q
Sbjct: 777 QNGNHVIQKCIECV--PTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGTSQSQC 834
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
I+ I +A L+++ GNYV QHVLE + + I L G + +S K S V++
Sbjct: 835 IVDEILQSACVLAQDQYGNYVTQHVLERGNAHERSQIIIKLAGQVVTMSQNKFASNVIEK 894
Query: 339 CLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
C ++ + + IVE+ N D + + D+Y NYV+Q ++ET N L L
Sbjct: 895 CFQHGDMAERDLLIRQIVEQTEGN-DNLLAMMKDQYANYVVQK-ILETCNENQREL---L 949
Query: 393 VTKLQQNLDSLR-FGYGKHVYNFIK 416
V++++ ++ +LR + YGKH+ + ++
Sbjct: 950 VSRVKGHMQALRKYTYGKHIVSRVE 974
>gi|20160612|dbj|BAB89558.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group]
gi|125572616|gb|EAZ14131.1| hypothetical protein OsJ_04054 [Oryza sativa Japonica Group]
Length = 1048
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 154/327 (47%), Gaps = 30/327 (9%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
S ++ + D+ GS+++Q+KL + D VF + ++ + + +V KF E +
Sbjct: 716 SHVVEFSADQYGSRFIQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGS 775
Query: 158 EDQLLRITLQITSQDQLF---VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR 214
Q + DQLF + S+ +G I+K ++ V LD K + L
Sbjct: 776 AAQRRELA------DQLFGHVLALSLQMYGCRVIQKAIEVVD-----LDQKTKMVTELDG 824
Query: 215 LLMM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEM 271
+M + G+ V+ +C+E + + + FI + L+ H GC + ++
Sbjct: 825 HIMRCVRDQNGNHVIQKCIECVPEDSIQ--FIISTFYGQVVPLSTHPYGCRVIQRVLEHC 882
Query: 272 KGPRRKQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
P+ ++I+ I + L+++ GNYVVQHVLE P+ I L G I +S K
Sbjct: 883 TDPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQMSQQK 942
Query: 331 CGSFVVQNCLKYRITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNS 385
S VV+ CL + ++ E L +D+ + + D++GNYV+Q L ET
Sbjct: 943 FASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVL-ETCDDQQ 1001
Query: 386 LHLHQRLVTKLQQNLDSL-RFGYGKHV 411
L ++++++ +L +L ++ YGKH+
Sbjct: 1002 REL---ILSRVKVHLSALKKYTYGKHI 1025
>gi|164658049|ref|XP_001730150.1| hypothetical protein MGL_2532 [Malassezia globosa CBS 7966]
gi|159104045|gb|EDP42936.1| hypothetical protein MGL_2532 [Malassezia globosa CBS 7966]
Length = 447
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 9/230 (3%)
Query: 184 GSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFI 243
G+ +++K + ++ P ++ A R L+ G+ V+ +CL ++ N FI
Sbjct: 3 GTRAVQKTIDFIST-PAQTQAIIDAFARNVVTLIKDLNGNHVIQKCLNRLP--AGDNQFI 59
Query: 244 YQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHV 303
Y A C+ +A H GC + ID +R+Q++ I++ + +L ++ GNYVVQ+V
Sbjct: 60 YDAVAAQCVDVATHRHGCCVLQRCIDHASESQRQQLVNEITMYSLTLVQDPFGNYVVQYV 119
Query: 304 LELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY-RITVNYIVEEFLLNSDQIFR 362
L+L DP E++ GH LS K S V++ C++ + + + L++ ++
Sbjct: 120 LDLNDPVSTESVTNQFLGHVFQLSTQKFSSNVIEKCIRVAEPPLRHKLVAELVDPSRLEL 179
Query: 363 VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
+ D + NYV+QT L H LV ++ L S+R YGK +
Sbjct: 180 LLRDSFANYVVQTCLDYAEPAQRTH----LVECIRPILPSIRNTPYGKRI 225
>gi|242072408|ref|XP_002446140.1| hypothetical protein SORBIDRAFT_06g002250 [Sorghum bicolor]
gi|241937323|gb|EES10468.1| hypothetical protein SORBIDRAFT_06g002250 [Sorghum bicolor]
Length = 761
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 156/314 (49%), Gaps = 17/314 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
++ D+ GS+++Q+KL +K+F + + + + +V KF E E QL+
Sbjct: 424 VSMDQYGSRFIQQKLEIASLDVREKIFPEILSNAIALTTDVFGNYVIQKFFEFATESQLI 483
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ ++ ++ S+ +G ++K+++ V + +D+V + LK + + G
Sbjct: 484 QLADKLKGH---ILELSLQMYGCRVVQKVLEVV-DMDRKIDIVHE-LKNYVLKCIGDQNG 538
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-RRKQILY 281
+ V+ +C+E + ++ F+ L L L H+ GC + ++ P + I+
Sbjct: 539 NHVIQKCIECVPE--DRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSAIMN 596
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I L+ + GNYVVQHVLE P +I L G + LS K S V++ CL
Sbjct: 597 EIVQQTFHLTDDKFGNYVVQHVLEHGKPEERSSIIQKLSGQVVILSKQKFASNVIEKCLA 656
Query: 342 YRI--TVNYIVEEFLLNSDQIFR-VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
+ + ++ E +++S Q F+ + D++GNYV+Q L +T L + +++ ++
Sbjct: 657 FGTPEERDSLIGE-IISSGQTFQELMKDQFGNYVVQRVL-QTCDDKYLEM---ILSSIKL 711
Query: 399 NLDSLR-FGYGKHV 411
+L+ L+ + YGKH+
Sbjct: 712 HLNELKNYTYGKHI 725
>gi|326512976|dbj|BAK03395.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 886
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 158/331 (47%), Gaps = 25/331 (7%)
Query: 92 FQHCANSG-ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFG 150
++ C +G ++ + D+ GS+++Q+KL + D VF + ++ + + +V
Sbjct: 544 YELCEIAGHVVEFSADQYGSRFIQQKLETASVEEKDMVFTEIMPQALTLMTDVFGNYVVQ 603
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
KF E + Q+ + Q+ + + S+ +G I+K ++ V LD K +
Sbjct: 604 KFFEHGSTAQIKELADQLIGR---VLALSLQMYGCRVIQKAIEVVD-----LDQQTKMVA 655
Query: 211 RLFRLLMM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNF 267
L +M + G+ V+ +C+E I N +FI + L+ H GC +
Sbjct: 656 ELDGHVMRCVRDQNGNHVIQKCIECIPQ--NIIEFIVSTFYGQVVVLSTHPYGCRVIQRV 713
Query: 268 IDEMKGPRRKQILYLISVNAASL-SRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
++ P+ +QI+ + + L + + GNYVVQHV+E P+ I L G + +
Sbjct: 714 LEHCDDPKTQQIMMDEVLQSVCLLATDQYGNYVVQHVMEHGKPHERSAIIEKLIGQIVQM 773
Query: 327 SLTKCGSFVVQNCLKYRITVNY--IVEEFLLNSDQIFRVAC---DKYGNYVIQTALIETM 381
S K S V++ CL + V ++ E L ++++ + D++ NYV+Q L ET
Sbjct: 774 SQQKFASNVIEKCLSFGSPVERQILIGEMLGSTEESEHLEVMMKDQFANYVVQKVL-ETC 832
Query: 382 RPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
+ ++T+++ +L++L ++ YGKH+
Sbjct: 833 DDQQ---REAILTRIKAHLNTLKKYTYGKHI 860
>gi|291399423|ref|XP_002716108.1| PREDICTED: pumilio 1-like isoform 1 [Oryctolagus cuniculus]
Length = 1186
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATTAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPAD--QQNEMVRELDGHVLKCVKD 967
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 968 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1025
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1026 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1086 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1141
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1142 HKIRPHIATLRKYTYGKHI 1160
>gi|405977786|gb|EKC42220.1| Pumilio-like protein 2 [Crassostrea gigas]
Length = 1012
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 156/325 (48%), Gaps = 24/325 (7%)
Query: 97 NSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETC 156
N+ ++ +QD+ GS+++Q+KL + + VFN + + ++ + + +V KF E
Sbjct: 675 NNHVVEFSQDQHGSRFIQQKLERASPQEKNVVFNEILAHAYSLMTDVFGNYVIQKFFEFG 734
Query: 157 NEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
+ +Q + ++ + ++ +G I+K ++ + + DL ++ +K L +
Sbjct: 735 SNEQKQTLAQRLRGH---VLPLALQMYGCRVIQKALETIPS-----DLQVEIVKELDGHV 786
Query: 217 ---MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
+ + G+ VV +C+E + + + FI A L L+ H GC + ++
Sbjct: 787 VKCVKDQNGNHVVQKCIECVDPIHLQ--FIIDAFKGQVLALSTHPYGCRVIQRILEHCTK 844
Query: 274 PRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+ IL + L ++ GNYVVQHVLE I +RG + LS K S
Sbjct: 845 EQITPILEELHQTTERLVQDQYGNYVVQHVLEHGSHDDKSKIVAEIRGKVLVLSQHKFAS 904
Query: 334 FVVQNCLKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLH 387
VV+ C+ Y R ++EE +D ++ + D++ NYV+Q +I+ P +
Sbjct: 905 NVVEKCVSYSSRAEKAMLIEEVCALTDGPQSALYIMMKDQFANYVVQK-MIDVAEPKQRN 963
Query: 388 LHQRLVTKLQQNLDSLR-FGYGKHV 411
+ L+ K++ ++ +LR + YGKH+
Sbjct: 964 I---LMHKIRPHIATLRKYTYGKHI 985
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 13/216 (6%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSV 225
LQ+ + V+ S D+ GS I++ ++ + P ++V + LM G+ V
Sbjct: 669 LQLKDLNNHVVEFSQDQHGSRFIQQKLERAS--PQEKNVVFNEILAHAYSLMTDVFGNYV 726
Query: 226 VLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISV 285
+ + E + N + + Q H L LA GC + ++ + + +I+ +
Sbjct: 727 IQKFFE--FGSNEQKQTLAQRLRGHVLPLALQMYGCRVIQKALETIPSDLQVEIVKELDG 784
Query: 286 NAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ----NCLK 341
+ ++ +GN+VVQ +E DP ++ I + +G + LS G V+Q +C K
Sbjct: 785 HVVKCVKDQNGNHVVQKCIECVDPIHLQFIIDAFKGQVLALSTHPYGCRVIQRILEHCTK 844
Query: 342 YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+IT I+EE ++ R+ D+YGNYV+Q L
Sbjct: 845 EQITP--ILEELHQTTE---RLVQDQYGNYVVQHVL 875
>gi|57834079|emb|CAE02858.2| OSJNBa0014F04.24 [Oryza sativa Japonica Group]
Length = 623
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 171/362 (47%), Gaps = 25/362 (6%)
Query: 55 SLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQ 114
S SG S N+ P++ + ++ + P F F+ G + D+ GS+++Q
Sbjct: 244 SKSGPSYNDNILYHDGPRFPSFKNAKIRVPCLF---TFE-----GHSISCMDQFGSRFIQ 295
Query: 115 EKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQL 174
+KL + +K+F + + + + +V KF E E QL ++ Q+
Sbjct: 296 QKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQLADQLRGH--- 352
Query: 175 FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIY 234
F+Q S +G ++K++ V + ++ LK + + G+ V+ +C+E +
Sbjct: 353 FLQLSFQMYGCRVVQKVIDVVDLERKIS--IVGELKNSVLRCISDQNGNHVIQKCIECVP 410
Query: 235 HHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR-RKQILYLISVNAASLSRN 293
+ F+ + L+ L H+ GC + ++ P + ++ I A L+ +
Sbjct: 411 E--DHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIVERAFDLTED 468
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYIVE 351
GNYVVQHVLE P +I L G ++LS K S VV+ CL + ++
Sbjct: 469 KFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGTPDEREGLIR 528
Query: 352 EFLLNSDQIFR-VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGK 409
E +++S Q F+ + D++GNYV+Q +++T L + +++ ++ +L+ L+ + +GK
Sbjct: 529 E-IVSSGQTFQGLMKDQFGNYVVQR-ILQTCDDKFLVV---ILSSIKMHLNELKNYTFGK 583
Query: 410 HV 411
H+
Sbjct: 584 HI 585
>gi|159112491|ref|XP_001706474.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia ATCC
50803]
gi|157434571|gb|EDO78800.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia ATCC
50803]
Length = 652
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 149/327 (45%), Gaps = 27/327 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTS--GDSRFLDKVFNVVSEFTF-----QIICNQYARFVFGKF 152
++L ++ G + LQ+ L SR+L VF ++E++ ++ + + F K
Sbjct: 324 LVLSFKEPTGCKILQQYLADFPDKSRYLLDVF--IAEYSTPSLMESLLIHPSGNYCFQKI 381
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVAN--RPPLLDLVMKALK 210
IE+ + Q LRI L I QD LF + G+ SI+KL + V++ ++ + A
Sbjct: 382 IESSDASQRLRILLLI--QDSLF-DICQNLHGTRSIQKLFERVSSDEEKAIIAQQLGAGD 438
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
R+ +L++ G+ V +C+E + FIY + + + H+ GC + +D
Sbjct: 439 RIIKLIVDIN-GNHCVQRCIETFAPKDCT--FIYDQIIRELVLVGTHQHGCCIIQRCLDL 495
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFS-----LRGHYID 325
+R QI+ I + L + GNYV Q+ LE + L I + GH
Sbjct: 496 CSEAQRVQIVTAIKNHVMELIVDRFGNYVFQYSLEKANNGLCGLISADDLIRPILGHEGS 555
Query: 326 LSLTKCGSFVVQNCLKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPN 384
L K S V+ CLKY + ++ E L+ S A DK+GNYV+Q A I
Sbjct: 556 LVNQKFSSHAVEKCLKYGSRRMRTLITENLMASSSFLSSAMDKFGNYVVQKAFIGATDEQ 615
Query: 385 SLHLHQRLVTKLQQNLDSLRFGYGKHV 411
+ QR++T + + L Y +H+
Sbjct: 616 KRTISQRVLT----SPEVLNCSYSRHL 638
>gi|15239174|ref|NP_199123.1| pumilio 13 [Arabidopsis thaliana]
gi|75171666|sp|Q9FMH4.1|PUM13_ARATH RecName: Full=Putative pumilio homolog 13; Short=APUM-13;
Short=AtPUM13
gi|9757836|dbj|BAB08273.1| unnamed protein product [Arabidopsis thaliana]
gi|332007526|gb|AED94909.1| pumilio 13 [Arabidopsis thaliana]
Length = 527
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 10/279 (3%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A D S+ L++ + G +D +F+ + +++ + + V I C+ +Q++
Sbjct: 216 IATDRVWSKELEKTIFVGTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCSSEQII 275
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPP-LLDLVMKALKRLFRLLMMTKP 221
I +T FV + G+ +I+ L+ ++ R + +M A+ + L
Sbjct: 276 LIVDVVTRHISKFVNICFNPIGTLAIQVLLTSIHERANNQIPRIMDAISSVALQLTRNTN 335
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR---RKQ 278
V+L C + + + +HC +A + GC + D+ + P R++
Sbjct: 336 AKYVILACFRMFTSSQCRR--LLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQR 393
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
++ + +A L N GNYVVQ+V+EL++ + + + L +Y L+ K GS VVQ
Sbjct: 394 LISEVIEHALKLCLNCHGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQK 453
Query: 339 CLKYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA 376
LK R I IV + L D + D +GNYVIQTA
Sbjct: 454 LLKLRGIDSKLIVVDLLRGIDTLL---LDPFGNYVIQTA 489
>gi|115441005|ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|113534313|dbj|BAF06696.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|215704672|dbj|BAG94300.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1060
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 154/327 (47%), Gaps = 30/327 (9%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
S ++ + D+ GS+++Q+KL + D VF + ++ + + +V KF E +
Sbjct: 728 SHVVEFSADQYGSRFIQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGS 787
Query: 158 EDQLLRITLQITSQDQLF---VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR 214
Q + DQLF + S+ +G I+K ++ V LD K + L
Sbjct: 788 AAQRRELA------DQLFGHVLALSLQMYGCRVIQKAIEVVD-----LDQKTKMVTELDG 836
Query: 215 LLMM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEM 271
+M + G+ V+ +C+E + + + FI + L+ H GC + ++
Sbjct: 837 HIMRCVRDQNGNHVIQKCIECVPEDSIQ--FIISTFYGQVVPLSTHPYGCRVIQRVLEHC 894
Query: 272 KGPRRKQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
P+ ++I+ I + L+++ GNYVVQHVLE P+ I L G I +S K
Sbjct: 895 TDPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQMSQQK 954
Query: 331 CGSFVVQNCLKYRITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNS 385
S VV+ CL + ++ E L +D+ + + D++GNYV+Q L ET
Sbjct: 955 FASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVL-ETCDDQQ 1013
Query: 386 LHLHQRLVTKLQQNLDSL-RFGYGKHV 411
L ++++++ +L +L ++ YGKH+
Sbjct: 1014 REL---ILSRVKVHLSALKKYTYGKHI 1037
>gi|158828285|gb|ABW81161.1| unknown [Capsella rubella]
Length = 991
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 156/330 (47%), Gaps = 30/330 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 627 VVEFSADQYGSRFIQQKLETATTDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPP 686
Query: 160 QLLRITLQITSQDQLF---VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
Q + D+LF + S+ +G I+K ++ V LD +K +K L +
Sbjct: 687 QRRELG------DKLFENVLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHV 735
Query: 217 MM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
M + G+ VV +C+E + N +FI H + L+ H GC + ++
Sbjct: 736 MRCVRDQNGNHVVQKCIECVPEENI--EFIISTFFGHVVSLSTHPYGCRVIQRVLEHCHD 793
Query: 274 PR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
P + +++ I + L+++ GNYVVQHVLE P I L G + +S K
Sbjct: 794 PDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFA 853
Query: 333 SFVVQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL + +V E L +D+ + + D++ NYV+Q L ET
Sbjct: 854 SNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQRE 912
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
L ++T+++ +L++L ++ YGKHV I+
Sbjct: 913 L---ILTRIKVHLNALKKYTYGKHVVARIE 939
>gi|350538385|ref|NP_001233239.1| Pumilio2 [Xenopus laevis]
gi|313661062|dbj|BAJ41096.1| Pumilio2 [Xenopus laevis]
Length = 1173
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 152/323 (47%), Gaps = 26/323 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VF+ + + +Q++ + + +V KF E + D
Sbjct: 840 IVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMD 899
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K +++++ +++ L +
Sbjct: 900 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISTD--QQSEMVRELDGHVLKCVKD 954
Query: 220 KPGSSVVLQCLE----QIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
+ G+ VV +C+E Q H FI +A L+ H GC + ++ +
Sbjct: 955 QNGNHVVQKCIECVTPQSLH------FIIEAFKGQVYVLSTHPYGCRVIQRILEHCTPEQ 1008
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
IL + + L ++ GNYV+QHVLE I +RG + LS K S V
Sbjct: 1009 TLPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVCEVRGQVLVLSQHKFASNV 1068
Query: 336 VQNCLKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
V+ C+ + R ++++E +D ++ + D+Y NYV+Q +I+ P +
Sbjct: 1069 VEKCVTHSSRTERAFLIDEICCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI- 1126
Query: 390 QRLVTKLQQNLDSLR-FGYGKHV 411
++ K++ ++ +LR + YGKH+
Sbjct: 1127 --IMHKIRPHITTLRKYTYGKHI 1147
>gi|395828861|ref|XP_003787581.1| PREDICTED: pumilio homolog 2 [Otolemur garnettii]
Length = 1027
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 136/290 (46%), Gaps = 14/290 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++K L +
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSD--QQSEMVKELDGHVLKCVKD 846
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 847 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 904
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 905 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 964
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRP 383
+ + R +++E +D ++ + D+Y NYV+Q +I+ P
Sbjct: 965 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEP 1013
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H L LA GC + ++ + ++ +++ + + ++ +GN+VVQ +E P
Sbjct: 803 HVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQP 862
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNY--IVEEFLLNSDQIFRVACDK 367
++ I + +G LS G V+Q L++ I+EE +++Q+ + D+
Sbjct: 863 QSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ---DQ 919
Query: 368 YGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIKDC 418
YGNYVIQ L E RP ++V++++ + L K N ++ C
Sbjct: 920 YGNYVIQHVL-EHGRPED---KSKIVSEIRGKV--LALSQHKFASNVVEKC 964
>gi|301609979|ref|XP_002934529.1| PREDICTED: pumilio homolog 2-like [Xenopus (Silurana) tropicalis]
Length = 1175
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 154/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VF+ + + +Q++ + + +V KF E + D
Sbjct: 842 IVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMD 901
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL-FRLLMM 218
Q L + +I + ++ +G I+K +++++ +D + ++ L +L
Sbjct: 902 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS-----IDQQSEMVRELDGHVLKC 953
Query: 219 TKP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
K G+ VV +C+E + + + FI A L+ H GC + ++ +
Sbjct: 954 VKDQNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVYVLSTHPYGCRVIQRILEHCTPEQT 1011
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL + + L ++ GNYV+QHVLE I +RG + LS K S VV
Sbjct: 1012 LPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVSEVRGKVLALSQHKFASNVV 1071
Query: 337 QNCLKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ C+ + R +++E +D ++ + D+Y NYV+Q +I+ P +
Sbjct: 1072 EKCVTHSSRTERALLIDEICCQNDGPHCALYTMMKDQYANYVVQK-MIDMAEPAQRKI-- 1128
Query: 391 RLVTKLQQNLDSLR-FGYGKHV 411
++ K++ ++ +LR + YGKH+
Sbjct: 1129 -IMHKIRPHITTLRKYTYGKHI 1149
>gi|227204207|dbj|BAH56955.1| AT4G25880 [Arabidopsis thaliana]
Length = 806
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 156/337 (46%), Gaps = 33/337 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + VF + +++ + + +V KF E N
Sbjct: 480 IVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNST 539
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q+ Q +Q +G I+K + + P + + L +
Sbjct: 540 QRKELADQLMGQIVPLLQM----YGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRD 593
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR--- 276
+ G+ V+ +C+E I +K F+ A L+ H GC + ++ +
Sbjct: 594 QNGNHVIQKCIENI--PADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRF 651
Query: 277 --KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
++IL + V LS++ GNYV QHVLE E I L GH + LSL K S
Sbjct: 652 ITEEILESVCV----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASN 707
Query: 335 VVQNCLKY--RITVNYIVEEFLLNSDQIFR----VACDKYGNYVIQTALIETMRPNSLHL 388
V++ CL+Y R+ + I++E + D+ + + D+YGNYV+Q + ET +
Sbjct: 708 VIEKCLEYGGRVERDLIIKE-IAGPDESYNSLLMMMKDQYGNYVVQK-IFETCTAD---- 761
Query: 389 HQRLV--TKLQQNLDSL-RFGYGKHVYNFIKDCDLQN 422
QRL ++++ + +L ++ YGKH+ + ++ ++
Sbjct: 762 -QRLTLFSRVRMHASALKKYTYGKHIVSRLEQPSIEG 797
>gi|255544506|ref|XP_002513314.1| pumilio, putative [Ricinus communis]
gi|223547222|gb|EEF48717.1| pumilio, putative [Ricinus communis]
Length = 1004
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 154/323 (47%), Gaps = 26/323 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL VF V +++ + + +V KF E + D
Sbjct: 680 IVEFSVDQHGSRFIQQKLEHCSFEEKVSVFKEVLPHASKLMTDVFGNYVIQKFFEHGSPD 739
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + +++ Q +Q S+ +G I+K ++ + LD + ++ L ++
Sbjct: 740 QRKELADKLSGQ---MLQLSLQMYGCRVIQKALEVIE-----LDQKTQLVQELDGHVLRC 791
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + N +FI A LA H GC + ++ +
Sbjct: 792 VHDQNGNHVIQKCIECVPTMNI--EFIISAFQGQVAALATHPYGCRVIQRVLEHCSDDLQ 849
Query: 277 KQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
Q I+ I +A L+++ GNYV QHVLE PY I L G + +S K S V
Sbjct: 850 SQCIVDEILESAYLLAQDQYGNYVTQHVLERGKPYERSQIISKLTGKIVQMSQHKYASNV 909
Query: 336 VQNCLKYR--ITVNYIVEEFL---LNSDQIFRVACDKYGNYVIQTAL-IETMRPNSLHLH 389
++ CL++ I ++EE + SDQ + D++ NYV+Q L I + +
Sbjct: 910 IEKCLEHGSPIEQELLIEEIIGQSEESDQFLTMMKDQFANYVVQKILEISNDKQREI--- 966
Query: 390 QRLVTKLQQNLDSL-RFGYGKHV 411
L+++++ +L +L ++ YGKH+
Sbjct: 967 --LLSRIRIHLHALKKYTYGKHI 987
>gi|384485031|gb|EIE77211.1| hypothetical protein RO3G_01915 [Rhizopus delemar RA 99-880]
Length = 649
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 147/318 (46%), Gaps = 28/318 (8%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL + S VF + Q++ + + +V KF E ++ Q +
Sbjct: 337 DQHGSRFIQQKLETASSEEKQMVFEEILPNALQLMTDVFGNYVIQKFFEHGSQAQKTVLA 396
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM---TKPG 222
+ + V S+ +G ++K ++ V L D ++ L ++ + G
Sbjct: 397 KHMETH---VVSLSLQMYGCRVVQKALEYV-----LTDQQAALVRELDGCVLKCVKDQNG 448
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV + +E++ H+ + FI +LA H GC + + + +L
Sbjct: 449 NHVVQKAIERVPAHHVQ--FIIDILHGQVYHLATHPYGCRVIQRVFEHCPKEQTIHLLEE 506
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
++ N + L ++ GNYV+QH+LE + + ++GH + LS K S VV+ C+ Y
Sbjct: 507 LNRNTSQLVQDQYGNYVIQHILEHGEAKDKALVISKVKGHVLQLSKHKFASNVVEKCVAY 566
Query: 343 RITVNY--IVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHLHQR--LVT 394
+ ++EE LL + + D+Y NYV+Q L + + QR L+
Sbjct: 567 GNPQDRQELIEEVLLTRPDGTYPLMSMMKDQYANYVVQKML------DVVDGSQRDLLIA 620
Query: 395 KLQQNLDSL-RFGYGKHV 411
K++ +L L ++ YGKH+
Sbjct: 621 KIKPHLQGLKKYTYGKHL 638
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 5/130 (3%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++ + I NA L + GNYV+Q E
Sbjct: 330 HAVEFSGDQHGSRFIQQKLETASSEEKQMVFEEILPNALQLMTDVFGNYVIQKFFEHGSQ 389
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YIVEEFLLNSDQIFRVACDK 367
+ + H + LSL G VVQ L+Y +T +V E + + D+
Sbjct: 390 AQKTVLAKHMETHVVSLSLQMYGCRVVQKALEYVLTDQQAALVREL---DGCVLKCVKDQ 446
Query: 368 YGNYVIQTAL 377
GN+V+Q A+
Sbjct: 447 NGNHVVQKAI 456
>gi|326521732|dbj|BAK00442.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 824
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 152/325 (46%), Gaps = 20/325 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + + VF V ++ + + +V KF E +
Sbjct: 500 IVDFSADQHGSRFIQQKLENCTAEEKAVVFAEVLPHASSLMTDVFGNYVIQKFFEHGTPE 559
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ V S+ +G I+K ++ V +DLV + + R +
Sbjct: 560 QRRDLAAKLAGH---VVPLSLQMYGCRVIQKALE-VMELDQKIDLVRELDGNIMRCVR-D 614
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ- 278
+ G+ V+ +C+E + F+ A L+ H GC + ++ G R Q
Sbjct: 615 QNGNHVIQKCIECV--PTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQC 672
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
I+ I +A L+++ GNYV QHV+E + I L G + +S K S V++
Sbjct: 673 IIDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEK 732
Query: 339 CLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
C ++ + + IVE+ N D + + D+Y NYV+Q ++ET L L
Sbjct: 733 CFQHGDIAERDLLIREIVEQTDGN-DTLLAMMKDQYANYVVQK-ILETCNDEQREL---L 787
Query: 393 VTKLQQNLDSLR-FGYGKHVYNFIK 416
V++++ +L +LR + YGKH+ + ++
Sbjct: 788 VSRVKGHLQALRKYTYGKHIASRVE 812
>gi|261331948|emb|CBH14941.1| pumillio RNA binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 585
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 158/327 (48%), Gaps = 20/327 (6%)
Query: 103 LAQDEQGSQYLQEKL--TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
LA+D+ G ++LQ L D + + + +++ +QYA F+ K + +D
Sbjct: 228 LAKDQHGCRFLQRLLCDPEADCEIPRTIMSEIVPHVAELMTDQYANFLVQKLFDIMPKD- 286
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
+R + + ++ A + G+ S++K+++ +++R L+ ++ +AL + L+
Sbjct: 287 -VRYNVACVAAPKIAAIA-LTPHGTFSVQKMIETISSREELV-IIREALSKDVVRLVKDA 343
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ + + L++ + +F+Y A C+ +A ++QGC + ++ +R ++
Sbjct: 344 NGNHAIQKVLQRF--EPDDKEFVYAAVAVDCITIAKNKQGCCVLQRCLEYASPAQRSTLV 401
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
I ++ + GNYV+Q+V+ D I+TI + H + L + K S V++ L
Sbjct: 402 RHILECCLQIAEDPYGNYVLQYVISAGDSKTIDTIAIAFLPHLVQLCMNKFSSNVMEKVL 461
Query: 341 KYRITVNYIVEEFLLNSDQIFRVAC----DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
V+ +V+E +++ VA D +GNYV+QTAL + + LV+ +
Sbjct: 462 ---CRVSPLVQEMYVDTMCTPEVAARLIQDDFGNYVLQTALTICTAGQA----EALVSVI 514
Query: 397 QQNLDSLR-FGYGKHVYNFIKDCDLQN 422
+ + S+R Y K + I+ L+N
Sbjct: 515 RPLMPSIRNTPYAKKLEGKIESAMLKN 541
>gi|396082534|gb|AFN84143.1| Puf RNA-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 529
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 137/283 (48%), Gaps = 28/283 (9%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+++D++GS+ +Q K+ + + FN +++ ++ N + +V K I E++
Sbjct: 224 ISKDQEGSRCIQRKMDNISKEEISWFFNNIADAAAELSANLFGNYVIQKIIPLVTEEERT 283
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R+T + Q L SV +G I+KL+ P +D +++ +K L+ + G
Sbjct: 284 RLTTSLVGQIHLL---SVHPYGCRVIQKLVDV----SPDVDFILEEVKGNLLELIEDQNG 336
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+E+ I Q ++ L+LA H+ GC + ++ K K I+ +
Sbjct: 337 NHVIQKCIEKCKDRR----IILQQFSKNSLFLATHKYGCRVIQRMLEFCKEEEIKDIVEI 392
Query: 283 ISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ N +L + GNYV+QH+L E E +IE I + Y +LS K S VV+
Sbjct: 393 LINNIKTLVDDQYGNYVIQHILTVGKEKEKNLVIEKI---IEKSY-ELSKCKFSSNVVEQ 448
Query: 339 CLKYRITVNYIVEEFLL-------NSDQIFRVACDKYGNYVIQ 374
C+K ++ N E FL + ++ + D YGNYV+Q
Sbjct: 449 CVK--LSNNGQRERFLEKFLEPVGSKPGMYSMCIDMYGNYVVQ 489
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 8/174 (4%)
Query: 221 PGSSVVLQCLEQIYHHNN----KNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
P S + L +IY + KN F + E C+ ++ ++G + +D +
Sbjct: 187 PMDSKFFRELLEIYEEQDGKGYKNVFGGTSMKEICISISKDQEGSRCIQRKMDNISKEEI 246
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
I+ AA LS N GNYV+Q ++ L + SL G LS+ G V+
Sbjct: 247 SWFFNNIADAAAELSANLFGNYVIQKIIPLVTEEERTRLTTSLVGQIHLLSVHPYGCRVI 306
Query: 337 QNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
Q + V++I+EE N + + D+ GN+VIQ IE + + L Q
Sbjct: 307 QKLVDVSPDVDFILEEVKGN---LLELIEDQNGNHVIQKC-IEKCKDRRIILQQ 356
>gi|297822641|ref|XP_002879203.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata]
gi|297325042|gb|EFH55462.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata]
Length = 973
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 153/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 640 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPP 699
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD +K +K L +M
Sbjct: 700 QRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 751
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-R 275
+ G+ VV +C+E + N +FI H + L+ H GC + ++ P
Sbjct: 752 VRDQNGNHVVQKCIECVPEENI--EFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDT 809
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + + L+++ GNYVVQHVLE P I L G + +S K S V
Sbjct: 810 QSKVMEEILITVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 869
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 870 VEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 926
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 927 -ILTRIKVHLNALKKYTYGKHI 947
>gi|326512890|dbj|BAK03352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 603
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 152/325 (46%), Gaps = 20/325 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + + VF V ++ + + +V KF E +
Sbjct: 279 IVDFSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFGNYVIQKFFEHGTPE 338
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ V S+ +G I+K ++ V +DLV + + R +
Sbjct: 339 QRRDLAAKLAGH---VVPLSLQMYGCRVIQKALE-VMELDQKIDLVRELDGNIMRCVR-D 393
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ- 278
+ G+ V+ +C+E + F+ A L+ H GC + ++ G R Q
Sbjct: 394 QNGNHVIQKCIECV--PTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQC 451
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
I+ I +A L+++ GNYV QHV+E + I L G + +S K S V++
Sbjct: 452 IIDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEK 511
Query: 339 CLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
C ++ + + IVE+ N D + + D+Y NYV+Q ++ET L L
Sbjct: 512 CFQHGDIAERDLLIREIVEQTDGN-DTLLAMMKDQYANYVVQK-ILETCNDEQREL---L 566
Query: 393 VTKLQQNLDSLR-FGYGKHVYNFIK 416
V++++ +L +LR + YGKH+ + ++
Sbjct: 567 VSRVKGHLQALRKYTYGKHIASRVE 591
>gi|197102622|ref|NP_001127595.1| pumilio homolog 1 [Pongo abelii]
gi|75041171|sp|Q5R5X3.1|PUM1_PONAB RecName: Full=Pumilio homolog 1
gi|55732279|emb|CAH92843.1| hypothetical protein [Pongo abelii]
Length = 1186
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 967
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 968 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1025
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1026 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1086 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1141
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1142 HKIRPHIATLRKYTYGKHI 1160
>gi|321475178|gb|EFX86141.1| hypothetical protein DAPPUDRAFT_308458 [Daphnia pulex]
Length = 581
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 157/331 (47%), Gaps = 19/331 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VF + T+ ++ + + +V KF E + +
Sbjct: 246 IVEFSQDQHGSRFIQQKLERATPAEKQMVFTEIIVGTYALMTDVFGNYVIQKFFEFGSPE 305
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +I + ++ +G I+K +++V + +++ L +
Sbjct: 306 QKSTLAQKIRGH---VLPLALQMYGCRVIQKALESVPSD--QQKEIVRELDGHVLKCVKD 360
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + FI A L L+ H GC + ++ + +
Sbjct: 361 QNGNHVVQKCIECV--DPMQLQFIIDAFEGQVLSLSTHPYGCRVIQRILEHCTPEQTSPV 418
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + N +L ++ GNYV+QHVLE P I +++G + LS K S VV+ C
Sbjct: 419 LNELHHNTETLIQDQYGNYVIQHVLEHGKPEDKLRIVTAVKGKVLSLSQHKFASNVVEKC 478
Query: 340 LKY--RITVNYIVEEFLLNSDQ-----IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
+ + R +++E + +D + + D+Y NYV+Q +I+ P+ L L
Sbjct: 479 VSHATRSERASLIDEVISFNDASPHSPLHTMMKDQYANYVVQK-MIDVAEPSQRKL---L 534
Query: 393 VTKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
+ K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 535 MHKIRPHVSTLRKYTYGKHILAKLEKYFLKN 565
>gi|194377510|dbj|BAG57703.1| unnamed protein product [Homo sapiens]
Length = 1127
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 794 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 853
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 854 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 908
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 909 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 966
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 967 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1026
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1027 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1082
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1083 HKIRPHIATLRKYTYGKHI 1101
>gi|297282790|ref|XP_002802328.1| PREDICTED: pumilio homolog 1 [Macaca mulatta]
gi|332808253|ref|XP_003307983.1| PREDICTED: pumilio homolog 1 [Pan troglodytes]
gi|397515867|ref|XP_003828163.1| PREDICTED: pumilio homolog 1 isoform 4 [Pan paniscus]
gi|402853683|ref|XP_003891520.1| PREDICTED: pumilio homolog 1 isoform 3 [Papio anubis]
Length = 1127
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 794 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 853
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 854 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 908
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 909 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 966
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 967 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1026
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1027 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1082
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1083 HKIRPHIATLRKYTYGKHI 1101
>gi|6056191|gb|AAF02808.1|AC009400_4 putative RNA binding protein [Arabidopsis thaliana]
Length = 1031
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 156/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + +F + + ++ + + +V KF E
Sbjct: 669 VIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTK 728
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+T + S+ +G I+K ++ V L+ + +K L +M
Sbjct: 729 QRKELAEQVTGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARMVKELDGSVMKC 780
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E++ + FI + L L+ H GC + ++ +
Sbjct: 781 VHDQNGNHVIQKCIERLPQ--DWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIET 838
Query: 277 KQILYL-ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++I+ I + +L+++ GNYV+QH+++ P+ I L G + +S K S V
Sbjct: 839 QRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNV 898
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D +GNYV+Q L ET SL L
Sbjct: 899 VEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCDDQSLAL-- 955
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++++++ +L++L R+ YGKH+
Sbjct: 956 -ILSRIKVHLNALKRYTYGKHI 976
>gi|13491166|ref|NP_055491.1| pumilio homolog 1 isoform 2 [Homo sapiens]
gi|332808248|ref|XP_001157169.2| PREDICTED: pumilio homolog 1 isoform 3 [Pan troglodytes]
gi|397515861|ref|XP_003828160.1| PREDICTED: pumilio homolog 1 isoform 1 [Pan paniscus]
gi|402853679|ref|XP_003891518.1| PREDICTED: pumilio homolog 1 isoform 1 [Papio anubis]
gi|41688619|sp|Q14671.3|PUM1_HUMAN RecName: Full=Pumilio homolog 1; Short=HsPUM; Short=Pumilio-1
gi|11139706|gb|AAG31807.1|AF315592_1 Pumilio 1 [Homo sapiens]
gi|15426559|gb|AAH13398.1| Pumilio homolog 1 (Drosophila) [Homo sapiens]
gi|119628038|gb|EAX07633.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|119628039|gb|EAX07634.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|158256990|dbj|BAF84468.1| unnamed protein product [Homo sapiens]
gi|325463587|gb|ADZ15564.1| pumilio homolog 1 (Drosophila) [synthetic construct]
gi|380784597|gb|AFE64174.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|383410801|gb|AFH28614.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|384943766|gb|AFI35488.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|410225216|gb|JAA09827.1| pumilio homolog 1 [Pan troglodytes]
gi|410266288|gb|JAA21110.1| pumilio homolog 1 [Pan troglodytes]
gi|410304036|gb|JAA30618.1| pumilio homolog 1 [Pan troglodytes]
gi|410350699|gb|JAA41953.1| pumilio homolog 1 [Pan troglodytes]
Length = 1186
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 967
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 968 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1025
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1026 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1086 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1141
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1142 HKIRPHIATLRKYTYGKHI 1160
>gi|403293270|ref|XP_003937643.1| PREDICTED: pumilio homolog 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1186
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 967
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 968 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1025
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1026 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1086 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1141
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1142 HKIRPHIATLRKYTYGKHI 1160
>gi|403293276|ref|XP_003937646.1| PREDICTED: pumilio homolog 1 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 1127
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 794 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 853
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 854 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 908
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 909 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 966
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 967 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1026
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1027 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1082
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1083 HKIRPHIATLRKYTYGKHI 1101
>gi|390465605|ref|XP_002750597.2| PREDICTED: pumilio homolog 1 isoform 1 [Callithrix jacchus]
Length = 1129
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 796 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 855
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 856 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 910
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 911 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 968
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 969 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1028
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1029 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1084
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1085 HKIRPHIATLRKYTYGKHI 1103
>gi|156084740|ref|XP_001609853.1| pumilio-family RNA binding repeat containing protein [Babesia
bovis]
gi|154797105|gb|EDO06285.1| pumilio-family RNA binding repeat containing protein [Babesia
bovis]
Length = 656
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 157/327 (48%), Gaps = 17/327 (5%)
Query: 90 NPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVF 149
N +H A + I ++A+D+ G + LQ+ L + D ++ + V + ++ + + ++
Sbjct: 227 NTDEHIAGN-IAIIAKDQTGCRLLQKMLETEDYLVVETILEGVMDNLVDLMMDPFGNYLC 285
Query: 150 GKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKAL 209
K I C+ Q+ I I + + S++ G+ ++++L++ V + P + V K L
Sbjct: 286 QKLITVCSTQQIDAI---IDVAGPMLIDISLNMHGTRTLQRLIE-VLHEPKQIAKVTKLL 341
Query: 210 KRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFID 269
L+ G+ V+ +CL + + +FI+QA L+ L A H GC + ID
Sbjct: 342 SPSVETLVTDINGNHVIQKCLSVLPPEDC--EFIHQAILKKSLMFATHRHGCCVIQRCID 399
Query: 270 EMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLT 329
+R +++ + + L ++ GNYVVQ++L+L++ + I ++ +
Sbjct: 400 AANTRQRDELVETLIEHTLELIQDPFGNYVVQYILKLKNMDVNARIVKAVAPKATLYAKH 459
Query: 330 KCGSFVVQNCL---KYRITVNYIVEEFLLNS-DQIFRVACDKYGNYVIQTALIETMRPNS 385
K S V++ CL RI N +VE+F+ D + + +GNYVIQ L R +
Sbjct: 460 KFSSNVIEKCLILTHTRIR-NILVEKFVKAPYDTLKDLMLHPFGNYVIQRVLSVAQRSDL 518
Query: 386 LHLHQRLVTKLQQNLDSLR-FGYGKHV 411
L+ +++ ++D LR GK +
Sbjct: 519 ----DELLKRMRPHIDELRTMSTGKRI 541
>gi|281202123|gb|EFA76328.1| hypothetical protein PPL_10093 [Polysphondylium pallidum PN500]
Length = 833
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 163/338 (48%), Gaps = 20/338 (5%)
Query: 49 STWAVPSLSGRSTVPNLSGTSN----PQYETITSSNF--QTPLGFQANPFQHCANSGILL 102
+T A+ T L T N P ++++ S+ +PL + + I
Sbjct: 276 TTTAIKKDDVSPTKKGLVSTDNQPRKPMTKSVSMSSIGPDSPLPMKITSLEEITGQ-IYH 334
Query: 103 LAQDEQGSQYLQEKLTSG-DSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
L + + G ++LQ+KL D+ + +F V E +++ + Y +++ + ++ C+ +Q
Sbjct: 335 LTKYQAGCRFLQKKLEEKPDAEHVTLIFKEVYEHLIELMVDPYGQYLIPQLMKYCDNNQR 394
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKP 221
I +I + + F + +G I+K+++ ++ P +D ++ ++ L
Sbjct: 395 KMIVDRIAPKVETF---ACHIYGIHGIQKVLQFLS--PEQVDTIIASISDKVISLSKDAK 449
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G+ ++ L+ N+ FI A +++ + + H+ GC +N ID + ++++
Sbjct: 450 GNYLIQSFLKTFSPETNQ--FICDAIMKNVIEICTHKVGCTVVNRAIDCANKVQLEKLID 507
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I+ +A L ++ GNYVVQH+L Y + I S+ G+ +LS+ K S V++ CL+
Sbjct: 508 SITNHALQLVQDQFGNYVVQHLLTNNKAYATKLIK-SVIGNIAELSVQKFSSNVIEKCLQ 566
Query: 342 YRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
T Y IV+E L I + DKY N+VIQTAL
Sbjct: 567 VANTETYESIVKE--LTEVDILTLLQDKYANFVIQTAL 602
>gi|391327709|ref|XP_003738339.1| PREDICTED: pumilio homolog 1-like [Metaseiulus occidentalis]
Length = 374
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 146/317 (46%), Gaps = 18/317 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ AQD+QGS+++Q KL S +FN + + + ++ +++ +V K + +E+
Sbjct: 38 VIEFAQDQQGSRFIQHKLESATPSEKQMIFNEIFTWVYSLMTHEFGNYVVQKLFDFGSEE 97
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVAN--RPPLLDLVMKALKRLFRLLM 217
Q L + ++T V ++ +G ++K + ++ R L+D L+
Sbjct: 98 QKLALAGKMTGH---IVNLTMHIYGCRVMQKALVSLPTEVRKKLID----ELRNHVVQCA 150
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +C E I FI + L H C + ++ K +
Sbjct: 151 NDENGNHVMQKCFETI--EPGYLQFIVDECIGKVRQLCSHSYACRVIQRLLEYCKFEQSI 208
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
IL I N L+++ GNYV+Q++L+ P I ++RG+ + LS K S V++
Sbjct: 209 PILQEIHANTLELAQDQYGNYVIQYILQHGLPKDKSAIIQAIRGNVVALSCHKYASNVME 268
Query: 338 NCLKYRITVNYIV--EEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
C+ + ++ V EE D IF++ D + NYV+Q ++E H + LV K
Sbjct: 269 KCVTHGSSLERTVLMEEVCATKDGIFKMMKDPFANYVVQR-MVEVA---DAHYSKLLVQK 324
Query: 396 LQQNLDSL-RFGYGKHV 411
+ N + L + GKH
Sbjct: 325 IALNKEQLQKSTSGKHA 341
>gi|125528359|gb|EAY76473.1| hypothetical protein OsI_04410 [Oryza sativa Indica Group]
Length = 1046
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 154/327 (47%), Gaps = 30/327 (9%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
S ++ + D+ GS+++Q+KL + D VF + ++ + + +V KF E +
Sbjct: 714 SHVVEFSADQYGSRFIQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGS 773
Query: 158 EDQLLRITLQITSQDQLF---VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR 214
Q + DQLF + S+ +G I+K ++ V LD K + L
Sbjct: 774 AAQRRELA------DQLFGHVLALSLQMYGCRVIQKAIEVVD-----LDQKTKMVTELDG 822
Query: 215 LLMM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEM 271
+M + G+ V+ +C+E + + + FI + L+ H GC + ++
Sbjct: 823 HIMRCVRDQNGNHVIQKCIECVPEDSIQ--FIISTFYGQVVPLSTHPYGCRVIQRVLEHC 880
Query: 272 KGPRRKQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
P+ ++I+ I + L+++ GNYVVQHVLE P+ I L G I +S K
Sbjct: 881 TYPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQMSQQK 940
Query: 331 CGSFVVQNCLKYRITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNS 385
S VV+ CL + ++ E L +D+ + + D++GNYV+Q L ET
Sbjct: 941 FASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVL-ETCDDQQ 999
Query: 386 LHLHQRLVTKLQQNLDSL-RFGYGKHV 411
L ++++++ +L +L ++ YGKH+
Sbjct: 1000 REL---ILSRVKVHLSALKKYTYGKHI 1023
>gi|401828248|ref|XP_003888416.1| RNA binding repeat domain-containing protein [Encephalitozoon
hellem ATCC 50504]
gi|392999688|gb|AFM99435.1| RNA binding repeat domain-containing protein [Encephalitozoon
hellem ATCC 50504]
Length = 529
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 136/283 (48%), Gaps = 28/283 (9%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+++D++GS+ +Q K+ + + FN +++ + N + +V K I E++
Sbjct: 224 VSKDQEGSRCIQRKMDNISKEEISWFFNNIADAAADLSANLFGNYVIQKIIPLLTEEERT 283
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R+T + Q L SV +G I+KL+ P +D +++ +K L+ + G
Sbjct: 284 RLTASLVGQIHLL---SVHPYGCRVIQKLVDV----SPDVDFILEEVKGNLLELIEDQNG 336
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+E+ I + E+ L+LA H+ GC + ++ K K I+ +
Sbjct: 337 NHVIQKCIEKCKDRR----IILKQFSENSLFLATHKYGCRVIQRMLEFCKEEEIKDIVEV 392
Query: 283 ISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ N +L + GNYV+QH+L E E +IE I + Y +LS K S VV+
Sbjct: 393 LISNIKTLVDDQYGNYVIQHILTVGKEKERNLVIEKI---IEKSY-ELSKCKFSSNVVEQ 448
Query: 339 CLKYRITVNYIVEEFLLN-------SDQIFRVACDKYGNYVIQ 374
C+K ++ N E+FL ++ + D YGNYV+Q
Sbjct: 449 CVK--LSNNGQREQFLEKFLEPVGAKPGMYSMCIDMYGNYVVQ 489
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Query: 226 VLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISV 285
+L+ E+ KN F + E C+ ++ ++G + +D + I+
Sbjct: 196 LLEIYEEQDGKGCKNVFGGTSMKEICISVSKDQEGSRCIQRKMDNISKEEISWFFNNIAD 255
Query: 286 NAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT 345
AA LS N GNYV+Q ++ L + SL G LS+ G V+Q +
Sbjct: 256 AAADLSANLFGNYVIQKIIPLLTEEERTRLTASLVGQIHLLSVHPYGCRVIQKLVDVSPD 315
Query: 346 VNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V++I+EE N + + D+ GN+VIQ IE + + L Q
Sbjct: 316 VDFILEEVKGN---LLELIEDQNGNHVIQKC-IEKCKDRRIILKQ 356
>gi|356550736|ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 6,
chloroplastic-like [Glycine max]
Length = 952
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 177/408 (43%), Gaps = 55/408 (13%)
Query: 43 VPLYPQSTWAVPSLSG-RSTVPNLSGTSNPQYETITS-------SNFQTPLGFQA--NP- 91
VP YP S P LSG + P L G N + S S +Q F + +P
Sbjct: 544 VPQYPSSPLCRPVLSGYPESSPGLLGGRNEMKRSPASGRNGGLLSGWQGQRAFDSAHDPK 603
Query: 92 ---FQHCANSG-------------ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEF 135
F SG I+ + D+ GS+++Q+KL S + VF V
Sbjct: 604 IAIFLEELKSGKGRRFELSDIIGHIVEFSTDQHGSRFIQQKLESCGVEEKELVFKEVLPH 663
Query: 136 TFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAV 195
T +++ + + +V KF E + +Q + ++ Q + S+ +G I+K ++
Sbjct: 664 TSKLMTDVFGNYVIQKFFEYGSPEQRKELANRLLGQ---ILPLSLQMYGCRVIQKALE-- 718
Query: 196 ANRPPLLDLVMKA-----LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEH 250
++DL KA L + + G+ V+ +C+E I N DFI A
Sbjct: 719 -----VIDLEQKAQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTKNI--DFIISAFRGQ 771
Query: 251 CLYLACHEQGCINMNNFIDEMKGPRRKQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
L+ H GC + ++ + Q I+ I + +L+++ GNYV QHVLE P
Sbjct: 772 IALLSMHPYGCRVIQRVLEHCSNEVQCQFIVDEILESVFTLAQDQYGNYVTQHVLERGKP 831
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YIVEEFLLN---SDQIFRVA 364
I L GH LS K S VV+ CL+Y + ++ E + + +D + +
Sbjct: 832 QERSQIIHKLSGHIFQLSQHKFASNVVEKCLEYGDATDRQLLIAEIVGHDKQNDNLLTMM 891
Query: 365 CDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
D++ NYVIQ + E N L+++++ + +L ++ YGKH+
Sbjct: 892 KDQFANYVIQK-VFEICSENQ---RATLLSRIRLHAHALKKYTYGKHI 935
>gi|255580219|ref|XP_002530940.1| pumilio, putative [Ricinus communis]
gi|223529499|gb|EEF31455.1| pumilio, putative [Ricinus communis]
Length = 1024
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 159/327 (48%), Gaps = 24/327 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +K+F + ++ + + +V KF E E
Sbjct: 691 VVEFSTDQYGSRFIQQKLEIATAEEKNKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTES 750
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+T+ + S+ +G I+K ++ V +D + + L +M
Sbjct: 751 QRTELANQLTAH---VLPLSLQMYGCRVIQKALEVVG-----VDQQTEMVAELDGSIMKC 802
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + ++ I + + L+ H GC + ++ +
Sbjct: 803 VRDQNGNHVIQKCIECVPE--DRIQSIISSFYGQVVALSTHPYGCRVIQRVLEHCESIDT 860
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+++ GNYV+QHVLE P+ I L G + +S K S V
Sbjct: 861 QQIIMDEIMQSVCVLAQDQYGNYVIQHVLEHGKPHERSAIICKLAGQIVKMSQQKFASNV 920
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L ++D+ + + D +GNYV+Q L ET SL L
Sbjct: 921 VEKCLIFGGPEERQILVNEMLGSTDENEPLQVMMKDPFGNYVVQKVL-ETCDDRSLEL-- 977
Query: 391 RLVTKLQQNLDSL-RFGYGKHVYNFIK 416
++++++ +L++L R+ YGKH+ + ++
Sbjct: 978 -ILSRIKIHLNALKRYTYGKHIVSRVE 1003
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 1/141 (0%)
Query: 234 YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRN 293
+ +N F +EH + + + G + ++ + +I I +A +L +
Sbjct: 674 FKNNKTRSFELSDIVEHVVEFSTDQYGSRFIQQKLEIATAEEKNKIFPEIIPHARTLMTD 733
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEF 353
GNYV+Q E + L H + LSL G V+Q L+ + V+ E
Sbjct: 734 VFGNYVIQKFFEHGTESQRTELANQLTAHVLPLSLQMYGCRVIQKALEV-VGVDQQTEMV 792
Query: 354 LLNSDQIFRVACDKYGNYVIQ 374
I + D+ GN+VIQ
Sbjct: 793 AELDGSIMKCVRDQNGNHVIQ 813
>gi|167377764|ref|XP_001734530.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903897|gb|EDR29287.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 476
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 162/346 (46%), Gaps = 29/346 (8%)
Query: 65 LSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRF 124
L T P +E I+ SN F ++ + C D+ G +YLQ +L + +
Sbjct: 130 LISTQTPHFEIISPSNVCIS-DFGSDFSKMC---------HDQYGCRYLQRQLEDNNPQT 179
Query: 125 LDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFG 184
+F + ++ + + ++ K IE N +Q ++I +IT F S + G
Sbjct: 180 TKYIFEQMLPIITPLMSDPFGNYLCQKLIEVVNSEQRIQIIRKITP---TFFIISKNIHG 236
Query: 185 SSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIY 244
+ SI+KL+ + + ++++ + L+ G+ V+ +CL+ + N FI+
Sbjct: 237 TRSIQKLISCYSTKEEQ-NMLINVISPYVIELIFDSNGNHVIQECLKTF--GKSDNGFIF 293
Query: 245 QAAL--EHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS---VNAASLSRNFSGNYV 299
+ ++ + +A H+ GC + ID R+Q++ LI N+ L ++ GNYV
Sbjct: 294 DTIVNDDNLVKVATHKHGCCVVQRCID---YGNRQQLITLIDEIVKNSLILVKDAFGNYV 350
Query: 300 VQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY-RITVNYIVEEFLLNSD 358
VQ++L ++ +I + L IDLS+ K S V++ ++ I V ++ + L
Sbjct: 351 VQYILNVDIVGVIIDVTKMLLNDLIDLSMQKFSSNVIEKLIRSDEIEVRQMIFDKFLQIK 410
Query: 359 QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR 404
+ ++ D Y NYVIQT L ++ S+ H +L + +L ++R
Sbjct: 411 DVTKLLQDSYANYVIQTCLDQS----SVEYHSKLSNWITPHLSTIR 452
>gi|356530316|ref|XP_003533728.1| PREDICTED: pumilio homolog 5-like [Glycine max]
Length = 985
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 173/405 (42%), Gaps = 47/405 (11%)
Query: 38 HPSPPVPL-----YPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANP- 91
HPS P+P YP+ + P L G NLS S I+ Q +P
Sbjct: 581 HPSSPLPSPVLSGYPEGS---PGLPGVRNEINLSPASGRNGGIISGWQVQRSFDSAHDPK 637
Query: 92 ---FQHCANSG-------------ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEF 135
F SG I+ + D+ GS+++Q+KL S VF V
Sbjct: 638 IVNFLEDLKSGKSRRFELSDIIGHIVEFSSDQHGSRFIQQKLESCSVEEKTLVFKEVLPH 697
Query: 136 TFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAV 195
+++ + + +V KF E + +Q + ++ Q + S+ +G I+K ++ +
Sbjct: 698 ASKLMTDVFGNYVIQKFFEYGSPEQRRELADRLVGQ---ILPLSLQMYGCRVIQKALEVI 754
Query: 196 A--NRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLY 253
+ L+ + + R R + G+ V+ +C+E I K FI A
Sbjct: 755 ELEQKAQLVHELDGNVMRCVR----DQNGNHVIQKCIESI--PTKKISFILSAFRGQVAT 808
Query: 254 LACHEQGCINMNNFIDEMKGPRRKQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLI 312
L+ H GC M ++ + Q I+ I + +L+++ GNYV QHVLE P
Sbjct: 809 LSMHPYGCRVMQRVLEHCTDESQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQER 868
Query: 313 ETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITV--NYIVEEFLLNS---DQIFRVACDK 367
I L GH + LS K S VV+ CL+Y T +V E + D + + D+
Sbjct: 869 SQIINKLSGHIVQLSQHKFASNVVEKCLEYGDTTERELLVAEIFGHDEKCDNLLTMMKDQ 928
Query: 368 YGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
+ NYV+Q +I+ N + L++ ++ + +L ++ YGKH+
Sbjct: 929 FANYVVQK-VIDICSENQRAM---LLSHVRIHAHALKKYTYGKHI 969
>gi|22330960|ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana]
gi|313471414|sp|Q9SS47.2|PUM4_ARATH RecName: Full=Pumilio homolog 4; Short=APUM-4; Short=AtPUM4
gi|332641375|gb|AEE74896.1| protein pumilio 4 [Arabidopsis thaliana]
Length = 1003
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 156/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + +F + + ++ + + +V KF E
Sbjct: 669 VIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTK 728
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+T + S+ +G I+K ++ V L+ + +K L +M
Sbjct: 729 QRKELAEQVTGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARMVKELDGSVMKC 780
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E++ + FI + L L+ H GC + ++ +
Sbjct: 781 VHDQNGNHVIQKCIERLPQ--DWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIET 838
Query: 277 KQILYL-ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++I+ I + +L+++ GNYV+QH+++ P+ I L G + +S K S V
Sbjct: 839 QRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNV 898
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D +GNYV+Q L ET SL L
Sbjct: 899 VEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCDDQSLAL-- 955
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++++++ +L++L R+ YGKH+
Sbjct: 956 -ILSRIKVHLNALKRYTYGKHI 976
>gi|410916791|ref|XP_003971870.1| PREDICTED: pumilio homolog 2-like [Takifugu rubripes]
Length = 1201
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 152/343 (44%), Gaps = 40/343 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q+KL VF + + +Q++ + + +V KF E + D
Sbjct: 842 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 901
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ +++ L +
Sbjct: 902 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKD 958
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 959 QNGNHVVQKCIECV--QPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTQEQTLPI 1016
Query: 280 LYLISVNAASLSRNFS------------------------GNYVVQHVLELEDPYLIETI 315
L + ++ L + F GNYV+QHVLE P I
Sbjct: 1017 LEELHQHSEQLGQKFQGVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKI 1076
Query: 316 CFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSD----QIFRVACDKYG 369
+RG + LS K S VV+ C+ + R +++E D ++ + D+Y
Sbjct: 1077 VAEVRGKVLVLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYA 1136
Query: 370 NYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
NYV+Q +I+ P + ++ K++ ++ +LR + YGKH+
Sbjct: 1137 NYVVQR-MIDMAEPAQRKI---IMHKIRPHIATLRKYTYGKHI 1175
>gi|159491213|ref|XP_001703567.1| puf protein [Chlamydomonas reinhardtii]
gi|158270641|gb|EDO96479.1| puf protein [Chlamydomonas reinhardtii]
Length = 314
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 154/320 (48%), Gaps = 24/320 (7%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL + L+ F V ++ + + +V KF+E +Q L++
Sbjct: 2 DQHGSRFIQQKLEGVAAEDLEAAFAEVLPRILHLMTDVFGNYVVQKFLEHGTPEQRLKLG 61
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSV 225
+ +Q S+ +G ++K ++ + +LV + + R + + G+ V
Sbjct: 62 RALHGH---VLQLSLQMYGCRVVQKALETFPEEAQM-ELVTELDGHIMRCVR-DQNGNHV 116
Query: 226 VLQCLEQIYHHNNKNDFIYQAALEHCLY----LACHEQGCINMNNFIDEMKGPRRKQ-IL 280
+ +C+E + H A L++ L L+ H GC + ++ +K RR+ ++
Sbjct: 117 IQKCIECVPTHR------IAAVLDNFLLCVVPLSTHPFGCRIIQRILEHVKDARRRSAVM 170
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
I A L+++ GNYV+QHVLE P +I SL + LS+ K S VV+ CL
Sbjct: 171 SDILAAAVQLTQDQYGNYVIQHVLERGTPEERASIAASLASSVVPLSMHKFASNVVEKCL 230
Query: 341 KYRITV--NYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
Y T + +V L + D + + D++GNYV+Q L S + ++ +++
Sbjct: 231 TYGSTADRDLLVSRMLGAHGDPVQAMMKDQFGNYVVQKVL----EVCSDEQREVMLARVR 286
Query: 398 QNLDSL-RFGYGKHVYNFIK 416
Q L +L R+ YGKH+ ++
Sbjct: 287 QQLHALKRYTYGKHIVARVE 306
>gi|357135024|ref|XP_003569112.1| PREDICTED: pumilio homolog 1-like, partial [Brachypodium
distachyon]
Length = 639
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 170/360 (47%), Gaps = 28/360 (7%)
Query: 67 GTSNPQYETITSSNFQTPL--GFQANP---FQHCANSG-ILLLAQDEQGSQYLQEKLTSG 120
G+ NP N L F++N ++ C +G ++ + D+ GS+++Q+KL +
Sbjct: 269 GSWNPDLVGKMDGNLMPSLLEEFKSNKSRTYELCEIAGHVVEFSADQYGSRFIQQKLETA 328
Query: 121 DSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASV 180
+ D VF+ + ++ + + +V KF E + Q+ ++ Q+ + + S+
Sbjct: 329 STEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTTQIKELSDQLIGR---VLALSL 385
Query: 181 DKFGSSSIRKLMKAV--ANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNN 238
+G I+K ++ V A + ++ + + R R + G+ V+ +C+E I +
Sbjct: 386 QMYGCRVIQKAIEVVDLAQQTKMVAELDGHIMRCVR----DQNGNHVIQKCIECIPQ--D 439
Query: 239 KNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGN 297
FI + L+ H GC + ++ P +QI+ I + L+++ GN
Sbjct: 440 VIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVCLLAQDQYGN 499
Query: 298 YVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR--ITVNYIVEEFL- 354
YVVQHVLE P+ I L G + +S K S V++ CL + + ++ E L
Sbjct: 500 YVVQHVLEHGKPHERTAIIDKLIGQVVQMSQQKFASNVIEKCLAFGNPVERQILIGEMLG 559
Query: 355 --LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
S+ + + D++ NYV+Q L ET + ++T+++ +L++L ++ YGKH+
Sbjct: 560 STTESEPLEVMMKDQFANYVVQKVL-ETCDDQQREM---ILTRIKAHLNTLKKYTYGKHI 615
>gi|158578543|gb|ABW74568.1| Mpt5 [Boechera divaricarpa]
Length = 970
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 153/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 637 VVEFSSDQYGSRFIQQKLETATADEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPP 696
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD +K +K L +M
Sbjct: 697 QRRELAEKLIDN---VLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 748
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-R 275
+ G+ VV +C+E + N +FI H + L+ H GC + ++ P
Sbjct: 749 VRDQNGNHVVQKCIECVPEDNI--EFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDT 806
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+++++ I + L+++ GNYVVQHVLE P I L G + +S K S V
Sbjct: 807 QRKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 866
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 867 VEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 923
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 924 -ILTRIKVHLNALKKYTYGKHI 944
>gi|426221803|ref|XP_004005096.1| PREDICTED: pumilio homolog 1 isoform 1 [Ovis aries]
Length = 1180
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 847 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 906
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 907 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 961
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 962 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1019
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1020 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1079
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1080 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1135
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1136 HKIRPHIATLRKYTYGKHI 1154
>gi|262411024|gb|ACY66878.1| P30Sh115J16 [Saccharum hybrid cultivar R570]
Length = 764
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 153/325 (47%), Gaps = 20/325 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + + VF V ++ + + +V KF E +
Sbjct: 440 IVEYSADQHGSRFIQQKLENCTAEEKASVFAEVLPHASSLMTDVFGNYVIQKFFEHGTRE 499
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + S+ +G I+K ++ V +DLV + + R +
Sbjct: 500 QRRDLATKLVGH---VLPLSLQMYGCRVIQKALE-VMELDQKIDLVHELDGHVMRCVR-D 554
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ- 278
+ G+ V+ +C+E + F+ A L+ H GC + ++ G + Q
Sbjct: 555 QNGNHVIQKCIECV--PTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGNSQGQC 612
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
I+ I +A L+++ GNYV QHVLE + I L G + +S K S V++
Sbjct: 613 IIDEILQSACILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKFASNVIEK 672
Query: 339 CLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
C ++ + + IVE+ N D + + D+Y NYV+Q ++ET N L L
Sbjct: 673 CFQHGDIAERDLLIRQIVEQTEAN-DNLLAMMKDQYANYVVQ-KILETCNENQREL---L 727
Query: 393 VTKLQQNLDSLR-FGYGKHVYNFIK 416
+++++ ++ +LR + YGKH+ + ++
Sbjct: 728 LSRVKGHMQALRKYTYGKHIVSRVE 752
>gi|47208830|emb|CAF90334.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1182
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 150/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q+KL VF + + +Q++ + + +V KF E + D
Sbjct: 848 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 907
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ D+V + + + +
Sbjct: 908 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSEQ-QSDIVRELDGHVLKCVK-D 962
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 963 QNGNHVVQKCIECV--QPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTQEQTLPI 1020
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + ++ L ++ GNYV+QHVLE P I +RG + LS K + + C
Sbjct: 1021 LEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFARTLWEKC 1080
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1081 VIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQR-MIDMAEPAQRKI---IM 1136
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1137 HKIRPHIATLRKYTYGKHI 1155
>gi|73950060|ref|XP_865319.1| PREDICTED: pumilio homolog 1 isoform 14 [Canis lupus familiaris]
Length = 1186
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 967
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 968 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1025
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1026 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1086 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1141
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1142 HKIRPHIATLRKYTYGKHI 1160
>gi|410966646|ref|XP_003989841.1| PREDICTED: pumilio homolog 1 isoform 1 [Felis catus]
Length = 1186
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 967
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 968 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1025
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1026 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1086 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1141
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1142 HKIRPHIATLRKYTYGKHI 1160
>gi|285026404|ref|NP_001165518.1| pumilio 2 [Oryzias latipes]
gi|261872059|gb|ACY02863.1| pumilio 2 [Oryzias latipes]
Length = 1199
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 156/345 (45%), Gaps = 44/345 (12%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q+KL VF + + +Q++ + + +V KF E + D
Sbjct: 840 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSPD 899
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ +++ L +
Sbjct: 900 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVIGDIVRELDGHVLKCVKD 956
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFID---------- 269
+ G+ VV +C+E + FI A L+ H GC + ++
Sbjct: 957 QNGNHVVQKCIECV--QPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPI 1014
Query: 270 --------EMKGPRRKQI--------LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIE 313
E G + + + Y +S +A L ++ GNYV+QHVLE P
Sbjct: 1015 LEELHQHSEQLGQKYQAVSLEMTPKTYYTVSRDA--LFKDQYGNYVIQHVLEHGRPEDKS 1072
Query: 314 TICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSD----QIFRVACDK 367
I +RG + LS K S VV+ C+ + R +++E D ++ + D+
Sbjct: 1073 KIVAEVRGKVLALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQ 1132
Query: 368 YGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
Y NYV+Q +I+ P + ++ K++ ++ +LR + YGKH+
Sbjct: 1133 YANYVVQR-MIDMAEPAQRKI---IMHKIRPHIATLRKYTYGKHI 1173
>gi|30685690|ref|NP_188660.3| pumilio 5 [Arabidopsis thaliana]
gi|313471415|sp|Q9LJX4.2|PUM5_ARATH RecName: Full=Pumilio homolog 5; Short=APUM-5; Short=AtPUM5
gi|332642831|gb|AEE76352.1| pumilio 5 [Arabidopsis thaliana]
Length = 961
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 150/326 (46%), Gaps = 32/326 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL VF+ V +++ + + +V KFIE
Sbjct: 633 VVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPA 692
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL--- 216
Q + Q+ Q V S+ +G I+K ++ ++D+ K L R L
Sbjct: 693 QREELVKQLAGQ---MVSLSLQMYGCRVIQKALE-------VIDVDQKT--ELIRELDGN 740
Query: 217 ----MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
+ + G+ V+ +C+E + + F+ A L+ H GC + ++
Sbjct: 741 VLKCVRDQNGNHVIQKCIESM--PAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCS 798
Query: 273 GPRRKQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
I+ I +A +L+ + GNYV QHVLE P I L G+ + +S K
Sbjct: 799 DDEETHCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKY 858
Query: 332 GSFVVQNCLKYRITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSL 386
S VV+ CL++ + +++EE + S++ + + D++ NYV+Q L E +
Sbjct: 859 ASNVVEKCLEHADSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVL-EISKDQQR 917
Query: 387 HLHQRLVTKLQQNLDSLR-FGYGKHV 411
+ LV +++ +L SLR + YGKH+
Sbjct: 918 EI---LVQRMKIHLQSLRKYTYGKHI 940
>gi|297834954|ref|XP_002885359.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata]
gi|297331199|gb|EFH61618.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata]
Length = 965
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 147/320 (45%), Gaps = 32/320 (10%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL VF+ V +++ + + +V KFIE Q +
Sbjct: 643 DQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELV 702
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL-------MM 218
Q+ Q V S+ +G I+K ++ ++D+ K L R L +
Sbjct: 703 KQLAGQ---MVSLSLQMYGCRVIQKALE-------VIDVDQKT--ELIRELDGNVLKCVR 750
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
+ G+ V+ +C+E + + F+ A L+ H GC + ++
Sbjct: 751 DQNGNHVIQKCIESM--PAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETH 808
Query: 279 -ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
I+ I +A +L+ + GNYV QHVLE P I L G+ + +S K S VV+
Sbjct: 809 CIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVE 868
Query: 338 NCLKYRITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
CL++ + +++EE + S++ + + D++ NYV+Q L E + + L
Sbjct: 869 KCLEHADSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVL-EISKDQQREI---L 924
Query: 393 VTKLQQNLDSLR-FGYGKHV 411
V +++ +L SLR + YGKH+
Sbjct: 925 VQRMKIHLQSLRKYTYGKHI 944
>gi|300797595|ref|NP_001180052.1| pumilio homolog 1 [Bos taurus]
gi|296490233|tpg|DAA32346.1| TPA: pumilio homolog 1 [Bos taurus]
Length = 1186
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 967
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 968 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1025
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1026 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1086 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1141
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1142 HKIRPHIATLRKYTYGKHI 1160
>gi|452821243|gb|EME28276.1| serine rich Pumilio family RNA binding domain pr otein [Galdieria
sulphuraria]
Length = 471
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 102/223 (45%), Gaps = 8/223 (3%)
Query: 197 NRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLAC 256
NR + + L + + L G+ V+ C +Y + N F+Y E+ L LA
Sbjct: 247 NRNVCISYLQSILSSVAKFLFKDVNGAHVIQHCF--LYWSSEDNQFLYHTIQENFLELAT 304
Query: 257 HEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETIC 316
H QGC + +D + I I + L + GNYVVQH+L+ ++P I I
Sbjct: 305 HRQGCCMIQTSMDFACSSQLDDIATNIIQHIFVLIHDAFGNYVVQHILDSKNPRYIHDIM 364
Query: 317 FSLRGHYIDLSLTKCGSFVVQNCLKY-RITVNY-IVEEFLLNSDQIFRVACDKYGNYVIQ 374
L+GH+ ++S+ K S + + CL+ T + ++EE I + D YGNYVIQ
Sbjct: 365 KKLQGHWYEMSMEKFSSNITEKCLQLAEATQRWEMIEELAQECSNIGNLLHDAYGNYVIQ 424
Query: 375 TALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHV-YNFIK 416
L +P + L + + K L R YGK + YN K
Sbjct: 425 RMLQVASQPQKIQL-KECIEKYWNTLSRSR--YGKQIQYNLEK 464
>gi|328698838|ref|XP_003240745.1| PREDICTED: pumilio homolog 2-like isoform 2 [Acyrthosiphon pisum]
Length = 1151
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 148/318 (46%), Gaps = 19/318 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 815 IVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 874
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K +++V + +++ L +
Sbjct: 875 QKSTLAQKVRGH---VLPLALQMYGCRVIQKALESVGGEQQVE--IVRELDGHVLKCVKD 929
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + H + FI A L L+ H GC + ++ + I
Sbjct: 930 QNGNHVVQKCIECVDPHALQ--FIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQTAPI 987
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 988 LDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNVVEKC 1047
Query: 340 LKY--RITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQR--LVT 394
+ + R + ++EE N + + + D+Y NYV+Q L + QR L+
Sbjct: 1048 VTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKML------DVCESSQRKVLMH 1101
Query: 395 KLQQNLDSLR-FGYGKHV 411
K++ + SLR + YGKH+
Sbjct: 1102 KIRPHFASLRKYTYGKHI 1119
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 9/219 (4%)
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
L +LQ+ V+ S D+ GS I++ ++ + P LV + LM
Sbjct: 801 LEDFSLQLRDLTNHIVEFSQDQHGSRFIQQKLERAST--PEKQLVFSEILAAAYSLMTDV 858
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ V+ + E + + + Q H L LA GC + ++ + G ++ +I+
Sbjct: 859 FGNYVIQKFFE--FGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIV 916
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
+ + ++ +GN+VVQ +E DP+ ++ I + +G + LS G V+Q L
Sbjct: 917 RELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRIL 976
Query: 341 KYRIT--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ + I++E + +Q+ + D+YGNYVIQ L
Sbjct: 977 EHCTSEQTAPILDEMHQHVEQLIQ---DQYGNYVIQHVL 1012
>gi|9293981|dbj|BAB01884.1| RNA binding protein-like [Arabidopsis thaliana]
Length = 962
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 147/320 (45%), Gaps = 32/320 (10%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL VF+ V +++ + + +V KFIE Q +
Sbjct: 640 DQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELV 699
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL-------MM 218
Q+ Q V S+ +G I+K ++ ++D+ K L R L +
Sbjct: 700 KQLAGQ---MVSLSLQMYGCRVIQKALE-------VIDVDQKT--ELIRELDGNVLKCVR 747
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
+ G+ V+ +C+E + + F+ A L+ H GC + ++
Sbjct: 748 DQNGNHVIQKCIESM--PAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETH 805
Query: 279 -ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
I+ I +A +L+ + GNYV QHVLE P I L G+ + +S K S VV+
Sbjct: 806 CIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVE 865
Query: 338 NCLKYRITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
CL++ + +++EE + S++ + + D++ NYV+Q L E + + L
Sbjct: 866 KCLEHADSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVL-EISKDQQREI---L 921
Query: 393 VTKLQQNLDSLR-FGYGKHV 411
V +++ +L SLR + YGKH+
Sbjct: 922 VQRMKIHLQSLRKYTYGKHI 941
>gi|301777185|ref|XP_002924016.1| PREDICTED: pumilio homolog 1-like [Ailuropoda melanoleuca]
Length = 1114
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 781 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 840
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 841 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 895
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 896 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 953
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 954 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1013
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1014 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1069
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1070 HKIRPHIATLRKYTYGKHI 1088
>gi|158828184|gb|ABW81063.1| Mpt5-1 [Arabidopsis lyrata subsp. lyrata]
Length = 969
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 156/330 (47%), Gaps = 30/330 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 636 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPHAHALMTDVFGNYVIQKFFEHGLPP 695
Query: 160 QLLRITLQITSQDQLF---VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
Q + ++LF + S+ +G I+K ++ V LD +K +K L +
Sbjct: 696 QRRELA------EKLFDNVLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHV 744
Query: 217 MM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
M + G+ VV +C+E + N +FI H + L+ H GC + ++
Sbjct: 745 MRCVRDQNGNHVVQKCIECVPEENI--EFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHD 802
Query: 274 P-RRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
P + +++ I + L+++ GNYVVQHVLE P I L G + +S K
Sbjct: 803 PDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFA 862
Query: 333 SFVVQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL + +V E L +D+ + + D++ NYV+Q L ET
Sbjct: 863 SNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQRE 921
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
L ++T+++ +L++L ++ YGKHV I+
Sbjct: 922 L---ILTRIKVHLNALKKYTYGKHVVARIE 948
>gi|297826303|ref|XP_002881034.1| mpt5-1 [Arabidopsis lyrata subsp. lyrata]
gi|297326873|gb|EFH57293.1| mpt5-1 [Arabidopsis lyrata subsp. lyrata]
Length = 969
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 156/330 (47%), Gaps = 30/330 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 636 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPHAHALMTDVFGNYVIQKFFEHGLPP 695
Query: 160 QLLRITLQITSQDQLF---VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
Q + ++LF + S+ +G I+K ++ V LD +K +K L +
Sbjct: 696 QRRELA------EKLFDNVLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHV 744
Query: 217 MM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
M + G+ VV +C+E + N +FI H + L+ H GC + ++
Sbjct: 745 MRCVRDQNGNHVVQKCIECVPEENI--EFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHD 802
Query: 274 P-RRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
P + +++ I + L+++ GNYVVQHVLE P I L G + +S K
Sbjct: 803 PDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFA 862
Query: 333 SFVVQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL + +V E L +D+ + + D++ NYV+Q L ET
Sbjct: 863 SNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQRE 921
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
L ++T+++ +L++L ++ YGKHV I+
Sbjct: 922 L---ILTRIKVHLNALKKYTYGKHVVARIE 948
>gi|222628370|gb|EEE60502.1| hypothetical protein OsJ_13800 [Oryza sativa Japonica Group]
Length = 750
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 154/314 (49%), Gaps = 17/314 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L+ D+ GS+++Q+KL + +K+F + + + + +V KF E E QL
Sbjct: 411 LSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLS 470
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ Q+ F+Q S +G ++K++ V + ++ LK + + G
Sbjct: 471 QLADQLRGH---FLQLSFQMYGCRVVQKVIDVVDLERKIS--IVGELKNSVLRCISDQNG 525
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR-RKQILY 281
+ V+ +C+E + + F+ + L+ L H+ GC + ++ P + ++
Sbjct: 526 NHVIQKCIECV--PEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMD 583
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I A L+ + GNYVVQHVLE P +I L G ++LS K S VV+ CL
Sbjct: 584 EIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLS 643
Query: 342 YRI--TVNYIVEEFLLNSDQIFR-VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
+ ++ E +++S Q F+ + D++GNYV+Q +++T L + +++ ++
Sbjct: 644 FGTPDEREGLIRE-IVSSGQTFQGLMKDQFGNYVVQR-ILQTCDDKFLVV---ILSSIKM 698
Query: 399 NLDSLR-FGYGKHV 411
+L+ L+ + +GKH+
Sbjct: 699 HLNELKNYTFGKHI 712
>gi|328698840|ref|XP_003240746.1| PREDICTED: pumilio homolog 2-like isoform 3 [Acyrthosiphon pisum]
Length = 1116
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 147/318 (46%), Gaps = 19/318 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 780 IVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 839
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K +++V + +++ L +
Sbjct: 840 QKSTLAQKVRGH---VLPLALQMYGCRVIQKALESVGGEQQVE--IVRELDGHVLKCVKD 894
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + H + FI A L L+ H GC + ++ + I
Sbjct: 895 QNGNHVVQKCIECVDPHALQ--FIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQTAPI 952
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 953 LDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNVVEKC 1012
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQR--LVT 394
+ + R + ++EE +D V D+Y NYV+Q L + QR L+
Sbjct: 1013 VTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKML------DVCESSQRKVLMH 1066
Query: 395 KLQQNLDSLR-FGYGKHV 411
K++ + SLR + YGKH+
Sbjct: 1067 KIRPHFASLRKYTYGKHI 1084
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 9/219 (4%)
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
L +LQ+ V+ S D+ GS I++ ++ + P LV + LM
Sbjct: 766 LEDFSLQLRDLTNHIVEFSQDQHGSRFIQQKLERAST--PEKQLVFSEILAAAYSLMTDV 823
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ V+ + E + + + Q H L LA GC + ++ + G ++ +I+
Sbjct: 824 FGNYVIQKFFE--FGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIV 881
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
+ + ++ +GN+VVQ +E DP+ ++ I + +G + LS G V+Q L
Sbjct: 882 RELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRIL 941
Query: 341 KYRIT--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ + I++E + +Q+ + D+YGNYVIQ L
Sbjct: 942 EHCTSEQTAPILDEMHQHVEQLIQ---DQYGNYVIQHVL 977
>gi|399219033|emb|CCF75920.1| unnamed protein product [Babesia microti strain RI]
Length = 546
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 141/301 (46%), Gaps = 16/301 (5%)
Query: 83 TPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICN 142
T + F N N+ + +A+D+ G + LQ+ L + L+ + V + ++ +
Sbjct: 188 TYIHFNLNTLLQSNNASLSDMAKDQSGCRLLQKSLDDIPAA-LEIILKEVLDNLVDLMTD 246
Query: 143 QYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPP-- 200
+ ++ K + C+E QL +L I + VQ S++ G+ +++KL++ V R
Sbjct: 247 PFGNYLCQKLMVVCSEKQL---SLLINALWNNLVQISLNMHGTRAVQKLIEIVKTRENTQ 303
Query: 201 -LLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQ 259
L+ ++ + L + L G+ V+ +CL + + FIY A +C+ LA H
Sbjct: 304 YLITILEGGVLDLIKDL----NGNHVIQKCL--LCLPSTDCQFIYDAMENNCVELATHRH 357
Query: 260 GCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSL 319
GC M ID +R ++ I N L + GNYVVQ+V++L+D + I L
Sbjct: 358 GCCVMQRCIDSANLEQRASLVENIVDNTLVLVEDAFGNYVVQYVMKLKDETINCKILELL 417
Query: 320 RGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRV-ACDKYGNYVIQTA 376
+ +L+ K S VV+ L Y IVE L + F++ D YGNYVIQ
Sbjct: 418 LPNLYELAKQKFSSNVVERLLIYGPDEVRKSIVETLLNEPPEAFKMLILDPYGNYVIQRM 477
Query: 377 L 377
L
Sbjct: 478 L 478
>gi|357130137|ref|XP_003566709.1| PREDICTED: pumilio homolog 1-like [Brachypodium distachyon]
Length = 857
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 160/330 (48%), Gaps = 23/330 (6%)
Query: 92 FQHCANSG-ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFG 150
++ C +G ++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V
Sbjct: 517 YELCEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQ 576
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAV--ANRPPLLDLVMKA 208
KF E + Q+ ++ Q+ + + S+ +G I+K ++ V A + ++ +
Sbjct: 577 KFFEHGSTTQIKELSDQLIGR---VLALSLQMYGCRVIQKAIEVVDLAQQTKMVAELDGH 633
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ R R + G+ V+ +C+E I + FI + L+ H GC + +
Sbjct: 634 IMRCVR----DQNGNHVIQKCIECIPQ--DVIQFIVSTFYGQVVLLSTHPYGCRVIQRVL 687
Query: 269 DEMKGPRRKQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
+ P +QI+ I + L+++ GNYVVQHVLE P+ I L G + +S
Sbjct: 688 EHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQVVQMS 747
Query: 328 LTKCGSFVVQNCLKYR--ITVNYIVEEFL---LNSDQIFRVACDKYGNYVIQTALIETMR 382
K S V++ CL + + ++ E L S+ + + D++ NYV+Q L ET
Sbjct: 748 QQKFASNVIEKCLAFGNPVERQILIGEMLGSTTESEPLEVMMKDQFANYVVQKVL-ETCD 806
Query: 383 PNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
+ ++T+++ +L++L ++ YGKH+
Sbjct: 807 DQQREM---ILTRIKAHLNTLKKYTYGKHI 833
>gi|67481757|ref|XP_656228.1| pumilio domain-containing protein C6G9.14 [Entamoeba histolytica
HM-1:IMSS]
gi|56473414|gb|EAL50842.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 476
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 149/308 (48%), Gaps = 19/308 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+ D+ G +YLQ +L + + +F + ++ + + ++ K IE N +Q +
Sbjct: 158 MCHDQYGCRYLQRQLEDNNPQTTKCIFEQMLPIITLLMSDPFGNYLCQKLIEVVNSEQRI 217
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+I +IT F S + G+ SI+KL+ + + ++++ + L+ G
Sbjct: 218 QIITKITP---TFFIISKNIHGTRSIQKLISCYSTKEEQ-NMLINVISPYVIELIFDSNG 273
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALE--HCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
+ V+ +CL+ +N+ FI+ A + + + +A H+ GC + ID R+Q++
Sbjct: 274 NHVIQECLKTFGKSDNR--FIFDAIVSDGNLVKVATHKHGCCVVQRCIDY---GNRQQLI 328
Query: 281 YLIS---VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
LI N+ L ++ GNYVVQ++L ++ +I + L IDLS+ K S V++
Sbjct: 329 TLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVINDVTKMLLDDLIDLSMQKFSSNVIE 388
Query: 338 NCLKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
++ I ++ + L + ++ D Y NYVIQT L ++ S+ H +L +
Sbjct: 389 KLVRSDEIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCLDQS----SVEYHSKLSNWI 444
Query: 397 QQNLDSLR 404
+L ++R
Sbjct: 445 IPHLSAIR 452
>gi|158828235|gb|ABW81112.1| putative pumilio Mpt5-2 [Boechera divaricarpa]
Length = 967
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 154/327 (47%), Gaps = 24/327 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 634 VVEFSADQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPP 693
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD +K +K L +M
Sbjct: 694 QRRELAEKLFDN---VLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 745
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-R 275
+ G+ VV +C+E + N +FI H + L+ H GC + ++ P
Sbjct: 746 VRDQNGNHVVQKCIECVPEENI--EFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDT 803
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + L+++ GNYVVQHVLE P I L G + +S K S V
Sbjct: 804 QSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 863
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 864 VEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 920
Query: 391 RLVTKLQQNLDSL-RFGYGKHVYNFIK 416
++T+++ +L++L ++ YGKHV I+
Sbjct: 921 -ILTRIKVHLNALKKYTYGKHVVARIE 946
>gi|156389181|ref|XP_001634870.1| predicted protein [Nematostella vectensis]
gi|156221958|gb|EDO42807.1| predicted protein [Nematostella vectensis]
Length = 342
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 154/321 (47%), Gaps = 22/321 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +E+
Sbjct: 26 IVEFSQDQHGSRFIQQKLERATNGEKHLVFHEILPAAYSLMTDVFGNYVIQKFFEFGSEE 85
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLL--DLVMKALKRLFRLLM 217
Q + I + ++ +G I+K ++ + PP + +LVM+ + + +
Sbjct: 86 QKHHLASCIRGH---VLPLALQMYGCRVIQKALECI---PPNVQHELVMELDGHVLKCVK 139
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ VV +C+E + H + FI A L+ H GC + ++ +
Sbjct: 140 -DQNGNHVVQKCIECVDPHALQ--FIIDAFQGQVYALSTHPYGCRVIQRILEHCLTEQTL 196
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
IL + L ++ GNYV+QHVLE P I LRG+ + LS K S VV+
Sbjct: 197 PILNEMHDQTDRLVQDQYGNYVIQHVLEHGTPEDRSKIVMQLRGNILPLSQHKFASNVVE 256
Query: 338 NCLKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQR 391
C+ + R +++E +D ++ + D++ NYV+Q +I+ P L
Sbjct: 257 KCVSFASRTERALLIDEVCNTNDGPHNALYTMMKDQFANYVVQK-MIDVAEPAQRKL--- 312
Query: 392 LVTKLQQNLDSLR-FGYGKHV 411
L+ +++ ++ +LR + YGKH+
Sbjct: 313 LMHRIRPHVATLRKYTYGKHI 333
>gi|49387789|dbj|BAD26354.1| pumilio/Puf RNA-binding domain-containing protein-like [Oryza
sativa Japonica Group]
gi|49389128|dbj|BAD26407.1| pumilio/Puf RNA-binding domain-containing protein-like [Oryza
sativa Japonica Group]
Length = 498
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Query: 243 IYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQH 302
+ A +E+C+ +ACH G + + N + + + +I + +N+ L+++ SGNY+VQ
Sbjct: 320 LVDAVVENCIEIACHLNGLLFLQNCLGHITLEEKYKIFTQVCINSVYLAKHRSGNYIVQD 379
Query: 303 VLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQI 360
VLE P+ +E I + HY+DL+ K S VV+ CLK + IV E +L+ D
Sbjct: 380 VLEFGHPFHLEIITSCFKTHYVDLARQKYSSRVVEKCLKVFGDLEQYLIVCELVLDLDHF 439
Query: 361 FRVACDKYGNYVIQTALIETMRP 383
+ D+ NYVI TAL+ P
Sbjct: 440 RDLVTDEVANYVISTALLACTVP 462
>gi|20513851|gb|AAM22812.1|AF427791_3 BPM [Hordeum vulgare subsp. vulgare]
Length = 911
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 155/321 (48%), Gaps = 22/321 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E +
Sbjct: 580 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTT 639
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAV--ANRPPLLDLVMKALKRLFRLLM 217
Q+ ++ Q+ + + S+ +G I+K ++ V A + ++ + + R R
Sbjct: 640 QIKELSDQLIGR---VLALSLQMYGCRVIQKAIEVVDLAQQTKMVGELDGHIMRCVR--- 693
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +C+E I + FI + L+ H GC + ++ P +
Sbjct: 694 -DQNGNHVIQKCIECIPQ--DIIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEHCDDPTTQ 750
Query: 278 QILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
QI+ I + L+++ GNYVVQHVLE P+ I L G + +S K S V+
Sbjct: 751 QIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQIVQMSQQKFASNVI 810
Query: 337 QNCLKYR--ITVNYIVEEFL---LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQR 391
+ CL + + ++ E L S+ + + D++ NYV+Q L ET +
Sbjct: 811 EKCLAFGNPVERQILIGEMLESTTESEPLEVMMKDQFANYVVQKVL-ETCDDQQREM--- 866
Query: 392 LVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 867 ILTRIKAHLNTLKKYTYGKHI 887
>gi|413917933|gb|AFW57865.1| hypothetical protein ZEAMMB73_710513 [Zea mays]
Length = 654
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 158/319 (49%), Gaps = 17/319 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
++ D+ GS+++Q+KL +K+F + + + + +V KF E E QL+
Sbjct: 316 ISMDQYGSRFIQQKLEIASLDDREKIFPEILSNAIALTTDVFGNYVIQKFFEFATERQLI 375
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ Q+ ++ S+ +G ++K+++ V ++ +D+V + + + + + G
Sbjct: 376 QLADQLKGH---ILELSLQMYGCRVVQKVLEVV-DKDRKIDIVHELRNHILKCIG-DQNG 430
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-RRKQILY 281
+ V+ +C+E + ++ F+ L L L H+ GC + ++ P + +
Sbjct: 431 NHVIQKCIECVPE--DRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSATMN 488
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I L+ + GNYVVQHVL+ P I L G + LS K S V++ CL+
Sbjct: 489 EIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEKCLE 548
Query: 342 YRI--TVNYIVEEFLLNSDQIFR-VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
+ + ++ E +++S Q F+ + D++GNYV+Q L +T L + +++ ++
Sbjct: 549 FGTLEERDSLIGE-IISSGQTFQELMKDQFGNYVVQKVL-KTCDERYLEM---ILSSIKL 603
Query: 399 NLDSLR-FGYGKHVYNFIK 416
+L+ L+ + YGKH+ ++
Sbjct: 604 HLNELKNYTYGKHIVTRVE 622
>gi|297833816|ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
lyrata]
gi|297330630|gb|EFH61049.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
lyrata]
Length = 1005
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 156/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + +F + + ++ + + +V KF E
Sbjct: 671 VIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTNK 730
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+T + S+ +G I+K ++ V L+ + ++ L +M
Sbjct: 731 QRKELAEQVTGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARIVQELDGSVMKC 782
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E++ + FI + L L+ H GC + ++ +
Sbjct: 783 VHDQNGNHVIQKCIERLPQ--DWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIET 840
Query: 277 KQILYL-ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++I+ I + +L+++ GNYV+QH+++ P+ I L G + +S K S V
Sbjct: 841 QRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNV 900
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D +GNYV+Q L ET SL L
Sbjct: 901 VEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCNDQSLAL-- 957
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++++++ +L++L R+ YGKH+
Sbjct: 958 -ILSRIKVHLNALKRYTYGKHI 978
>gi|328698836|ref|XP_001950648.2| PREDICTED: pumilio homolog 2-like isoform 1 [Acyrthosiphon pisum]
Length = 983
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 148/318 (46%), Gaps = 19/318 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 647 IVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 706
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K +++V + +++ L +
Sbjct: 707 QKSTLAQKVRGH---VLPLALQMYGCRVIQKALESVGGEQQVE--IVRELDGHVLKCVKD 761
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + H + FI A L L+ H GC + ++ + I
Sbjct: 762 QNGNHVVQKCIECVDPHALQ--FIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQTAPI 819
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 820 LDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNVVEKC 879
Query: 340 LKY--RITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQR--LVT 394
+ + R + ++EE N + + + D+Y NYV+Q L + QR L+
Sbjct: 880 VTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKML------DVCESSQRKVLMH 933
Query: 395 KLQQNLDSLR-FGYGKHV 411
K++ + SLR + YGKH+
Sbjct: 934 KIRPHFASLRKYTYGKHI 951
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 9/215 (4%)
Query: 165 TLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSS 224
+LQ+ V+ S D+ GS I++ ++ + P LV + LM G+
Sbjct: 637 SLQLRDLTNHIVEFSQDQHGSRFIQQKLERAST--PEKQLVFSEILAAAYSLMTDVFGNY 694
Query: 225 VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
V+ + E + + + Q H L LA GC + ++ + G ++ +I+ +
Sbjct: 695 VIQKFFE--FGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELD 752
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
+ ++ +GN+VVQ +E DP+ ++ I + +G + LS G V+Q L++
Sbjct: 753 GHVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCT 812
Query: 345 T--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ I++E + +Q+ + D+YGNYVIQ L
Sbjct: 813 SEQTAPILDEMHQHVEQLIQ---DQYGNYVIQHVL 844
>gi|19074973|ref|NP_586479.1| RNA-BINDING PROTEIN OF THE PUMILIO FAMILY) [Encephalitozoon
cuniculi GB-M1]
gi|19069698|emb|CAD26083.1| RNA-BINDING PROTEIN OF THE PUMILIO FAMILY) [Encephalitozoon
cuniculi GB-M1]
Length = 530
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 28/283 (9%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+++D++GS+ +Q K+ S + FN + + ++ N + +V K I E++
Sbjct: 225 ISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEEERA 284
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R+ ++ Q L SV +G I+KL+ ++ +D +++ ++ L+ + G
Sbjct: 285 RLIAKLAKQINLL---SVHPYGCRVIQKLVDVSSD----VDFILEEVRDNLLELIEDQNG 337
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+E+ N I Q E+ L+LA H+ GC + ++ + K I+ +
Sbjct: 338 NHVIQKCIEKCKDRN----IILQQFSENSLFLATHKYGCRVIQRMLEFCREDEIKNIVEV 393
Query: 283 ISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ N +L + GNYV+QH+L E E +IE I + Y +LS K S VV+
Sbjct: 394 LISNIKTLVDDQYGNYVIQHILAVGKEDEKNLVIEKI---IEKSY-ELSRCKFSSNVVEQ 449
Query: 339 CLKYRITVNYIVEEFLL-------NSDQIFRVACDKYGNYVIQ 374
C+K ++ N E FL + ++ + D YGNYV+Q
Sbjct: 450 CVK--LSNNGQRERFLAKFLEPVGSKPGMYSMCVDMYGNYVVQ 490
>gi|218185985|gb|EEC68412.1| hypothetical protein OsI_36587 [Oryza sativa Indica Group]
Length = 1013
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 27/295 (9%)
Query: 117 LTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFV 176
L G D + +V + ++ +Q+ + K IE N++Q + +ITS +
Sbjct: 712 LAGGGRPAWDFLLDVAALRFLRLAKDQHGCCIIQKCIEHSNDEQKYNLLCKITSS---AL 768
Query: 177 QASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHH 236
S D++G+ I+ ++ ++K LK F L M K GS VV CL+Q
Sbjct: 769 GLSEDQYGNYVIQFVVNLGIEW--ATSKIVKELKGNFGYLSMQKCGSHVVENCLKQASEL 826
Query: 237 NNK---NDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRN 293
+ + ++ + L H + G + + E KG + I +A +L +
Sbjct: 827 DREMIIHELMADPKLPHIM---ADPFGNFVIQTALKECKGELHSSFVEAIRPHAPALQND 883
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVE 351
NYV+Q V+ L + I L+GH+ LS+ KCGS VV+NCLK + I+
Sbjct: 884 V--NYVIQFVVNLGIEWATSKIVKELKGHFGYLSMQKCGSHVVENCLKQASELDREMIIH 941
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTAL-----------IETMRPNSLHLHQRLVTK 395
E L+ ++ + D +GN+VIQTAL +E +RP++ L + K
Sbjct: 942 E-LMADPKLPHIMADPFGNFVIQTALKECKGELHSSFVEAIRPHAPALQNDVYAK 995
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 18/134 (13%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I +LA+D+ G ++LQ+ T G +KV + + +++ + + ++ K +E C++D
Sbjct: 422 IYMLAKDQNGCRFLQKVFTEGTKEDFEKVLAEIIDHFGELMIDPFGNYLVQKLLEECSDD 481
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q S ++K++ + N P + V+ AL LM
Sbjct: 482 QRTQKNIQ-----------------DSHVQKVIDTI-NTPEQISKVVSALSPGAMRLMTD 523
Query: 220 KPGSSVVLQCLEQI 233
GS V +CL+++
Sbjct: 524 TNGSHVAQRCLKKL 537
>gi|293331587|ref|NP_001169459.1| uncharacterized protein LOC100383330 [Zea mays]
gi|224029501|gb|ACN33826.1| unknown [Zea mays]
Length = 453
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 158/319 (49%), Gaps = 17/319 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
++ D+ GS+++Q+KL +K+F + + + + +V KF E E QL+
Sbjct: 115 ISMDQYGSRFIQQKLEIASLDDREKIFPEILSNAIALTTDVFGNYVIQKFFEFATERQLI 174
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ Q+ ++ S+ +G ++K+++ V ++ +D+V + + + + + G
Sbjct: 175 QLADQLKGH---ILELSLQMYGCRVVQKVLEVV-DKDRKIDIVHELRNHILKCIG-DQNG 229
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-RRKQILY 281
+ V+ +C+E + ++ F+ L L L H+ GC + ++ P + +
Sbjct: 230 NHVIQKCIECV--PEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSATMN 287
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I L+ + GNYVVQHVL+ P I L G + LS K S V++ CL+
Sbjct: 288 EIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEKCLE 347
Query: 342 YRI--TVNYIVEEFLLNSDQIFR-VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
+ + ++ E +++S Q F+ + D++GNYV+Q L +T L + +++ ++
Sbjct: 348 FGTLEERDSLIGE-IISSGQTFQELMKDQFGNYVVQKVL-KTCDERYLEM---ILSSIKL 402
Query: 399 NLDSLR-FGYGKHVYNFIK 416
+L+ L+ + YGKH+ ++
Sbjct: 403 HLNELKNYTYGKHIVTRVE 421
>gi|344287508|ref|XP_003415495.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Loxodonta
africana]
Length = 1185
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 151/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 852 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 911
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ L +
Sbjct: 912 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPAD--QQNEMVRELDGHVLKCVKD 966
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 967 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1024
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1025 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1084
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1085 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1140
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1141 HKIRPHIATLRKYTYGKHI 1159
>gi|356558296|ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]
Length = 982
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 153/323 (47%), Gaps = 26/323 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTS--GDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
I+ + D+ GS+++Q+KL S G+ + L VF V +++ + + +V KF E +
Sbjct: 659 IVEFSSDQHGSRFIQQKLESCSGEEKAL--VFKEVLPHASKLMTDVFGNYVIQKFFEYGS 716
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALKRLFRL 215
+Q + ++ Q + S+ +G I+K ++ + + L+ + + R R
Sbjct: 717 SEQRRELADRLVGQ---ILPLSLQMYGCRVIQKALEVIELEQKAQLVHELDGNVMRCVR- 772
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE-MKGP 274
+ G+ V+ +C+E I K FI A L+ H GC + ++ M
Sbjct: 773 ---DQNGNHVIQKCIESI--QTKKISFILSAFRGQVATLSMHPYGCRVIQRVLEHCMDES 827
Query: 275 RRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
+ + I+ I + +L+++ GNYV QHVLE P I L GH + LS K S
Sbjct: 828 QCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQILSKLSGHIVQLSQHKFASN 887
Query: 335 VVQNCLKYRITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLH 389
VV+ CL+Y +V E + DQ + + D++ NYV+Q +I+ N +
Sbjct: 888 VVEKCLEYGDATERELLVAEIFGHDDQCDNLLTMMKDQFANYVVQK-VIDICSENQRAM- 945
Query: 390 QRLVTKLQQNLDSL-RFGYGKHV 411
L++ ++ + +L ++ YGKH+
Sbjct: 946 --LLSHVRIHAHALKKYTYGKHI 966
>gi|338721822|ref|XP_001916930.2| PREDICTED: pumilio homolog 1 [Equus caballus]
Length = 1163
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 151/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 830 IMEFSQDQHGSRFIQLKLERATPTERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 889
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ L +
Sbjct: 890 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPAD--QQNEMVRELDGHVLKCVKD 944
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 945 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1002
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1003 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1062
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1063 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1118
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1119 HKIRPHIATLRKYTYGKHI 1137
>gi|302759032|ref|XP_002962939.1| hypothetical protein SELMODRAFT_1983 [Selaginella moellendorffii]
gi|300169800|gb|EFJ36402.1| hypothetical protein SELMODRAFT_1983 [Selaginella moellendorffii]
Length = 337
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 154/319 (48%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + VF+ V F ++ + + +V KF E N
Sbjct: 24 VVEFSADQHGSRFIQQKLEAATAEEKAMVFDEVLPQAFTLMTDVFGNYVIQKFFEHGNSQ 83
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + + ++ S+ +G I+K ++ V + LV++ + R +
Sbjct: 84 QRRELANLLVGH---MLELSLQMYGCRVIQKALE-VCDVDQQTQLVVELDGHVMRCVR-D 138
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ- 278
+ G+ V+ +C+E + +K FI A L L+ H GC + ++ +++
Sbjct: 139 QNGNHVIQKCIECVP--PDKIQFIISAFYGQVLVLSTHPYGCRVIQRVLEHCTDDQKQAG 196
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
I+ I SL+++ GNYV+QHVLE P+ I L G + +S K S VV+
Sbjct: 197 IMEEILGATCSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASNVVEK 256
Query: 339 CLKYR--ITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
CL++ +V+E L +D+ + + D++ NYV+Q L ET + L+
Sbjct: 257 CLEFGGPAERQILVDEMLGTTDENAPLQAMMKDQFANYVVQKVL-ETCSDQQREM---LL 312
Query: 394 TKLQQNLDSL-RFGYGKHV 411
+++ +L +L ++ YGKH+
Sbjct: 313 GRIKVHLHALKKYTYGKHI 331
>gi|413917932|gb|AFW57864.1| hypothetical protein ZEAMMB73_710513 [Zea mays]
Length = 658
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 156/314 (49%), Gaps = 17/314 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
++ D+ GS+++Q+KL +K+F + + + + +V KF E E QL+
Sbjct: 316 ISMDQYGSRFIQQKLEIASLDDREKIFPEILSNAIALTTDVFGNYVIQKFFEFATERQLI 375
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ Q+ ++ S+ +G ++K+++ V ++ +D+V + + + + + G
Sbjct: 376 QLADQLKGH---ILELSLQMYGCRVVQKVLEVV-DKDRKIDIVHELRNHILKCIG-DQNG 430
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-RRKQILY 281
+ V+ +C+E + ++ F+ L L L H+ GC + ++ P + +
Sbjct: 431 NHVIQKCIECVPE--DRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSATMN 488
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I L+ + GNYVVQHVL+ P I L G + LS K S V++ CL+
Sbjct: 489 EIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEKCLE 548
Query: 342 YRI--TVNYIVEEFLLNSDQIFR-VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
+ + ++ E +++S Q F+ + D++GNYV+Q L +T L + +++ ++
Sbjct: 549 FGTLEERDSLIGE-IISSGQTFQELMKDQFGNYVVQKVL-KTCDERYLEM---ILSSIKL 603
Query: 399 NLDSLR-FGYGKHV 411
+L+ L+ + YGKH+
Sbjct: 604 HLNELKNYTYGKHI 617
>gi|348517672|ref|XP_003446357.1| PREDICTED: pumilio homolog 2 isoform 1 [Oreochromis niloticus]
Length = 1214
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 156/345 (45%), Gaps = 44/345 (12%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q+KL VF + + +Q++ + + +V KF E + D
Sbjct: 855 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 914
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ +++ L +
Sbjct: 915 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKD 971
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFID---------- 269
+ G+ VV +C+E + FI A L+ H GC + ++
Sbjct: 972 QNGNHVVQKCIECV--QPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPI 1029
Query: 270 --------EMKGPRRKQI--------LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIE 313
E G + + + Y +S +A L ++ GNYV+QHVLE P
Sbjct: 1030 LEELHQHSEQLGQKYQGVSLEMTPKTYYTVSRDA--LFKDQYGNYVIQHVLEHGRPEDKS 1087
Query: 314 TICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSD----QIFRVACDK 367
I +RG + LS K S VV+ C+ + R +++E D ++ + D+
Sbjct: 1088 KIVAEVRGKVLVLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQ 1147
Query: 368 YGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
Y NYV+Q +I+ P + ++ K++ ++ +LR + YGKH+
Sbjct: 1148 YANYVVQR-MIDMAEPAQRKI---IMHKIRPHIATLRKYTYGKHI 1188
>gi|302757830|ref|XP_002962338.1| hypothetical protein SELMODRAFT_78497 [Selaginella moellendorffii]
gi|300169199|gb|EFJ35801.1| hypothetical protein SELMODRAFT_78497 [Selaginella moellendorffii]
Length = 353
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 151/313 (48%), Gaps = 18/313 (5%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL + + VF+ V F ++ + + +V KF E N Q +
Sbjct: 1 DQHGSRFIQQKLEAATAEEKAMVFDEVLPQAFTLMTDVFGNYVIQKFFEHGNSQQRRELA 60
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSV 225
+ ++ S+ +G I+K ++ V + LV++ + R + + G+ V
Sbjct: 61 NLLVGH---MLELSLQMYGCRVIQKALE-VCDVDQQTQLVVELDGHVMRCVR-DQNGNHV 115
Query: 226 VLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ-ILYLIS 284
+ +C+E + +K FI A L L+ H GC + ++ +++ I+ I
Sbjct: 116 IQKCIECVP--PDKIQFIISAFYGQVLVLSTHPYGCRVIQRVLEHCTDDQKQAGIMEEIL 173
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR- 343
SL+++ GNYV+QHVLE P+ I L G + +S K S VV+ CL++
Sbjct: 174 GATCSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASNVVEKCLEFGG 233
Query: 344 -ITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQN 399
+V+E L +D+ + + D++ NYV+Q L ET + L+ +++ +
Sbjct: 234 PAERQILVDEMLGTTDENAPLQAMMKDQFANYVVQKVL-ETCSDQQREM---LLGRIKVH 289
Query: 400 LDSL-RFGYGKHV 411
L +L ++ YGKH+
Sbjct: 290 LHALKKYTYGKHI 302
>gi|168012861|ref|XP_001759120.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689819|gb|EDQ76189.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1119
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 152/318 (47%), Gaps = 28/318 (8%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL + + VF V ++ + + +V KF E + Q +
Sbjct: 793 DQHGSRFIQQKLETATPEDKNMVFQEVLPRALTLMTDVFGNYVIQKFFEHGTQQQRRELA 852
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALKRLFRLLMMTKPGS 223
Q+ + S+ +G I+K ++ V + L+ + + R R + G+
Sbjct: 853 NQLVGH---VLVLSLQMYGCRVIQKALEVVDVDQQTVLVSELDGHVMRCVR----DQNGN 905
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI----DEMKGPRRKQI 279
V+ +C+E + K +FI A + L+ H GC + + DE K +K I
Sbjct: 906 HVIQKCIECV--PPAKINFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQK---QKGI 960
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I + +L+++ GNYVVQHVLE Y I L G + +S K S VV+ C
Sbjct: 961 MEEILRSTCTLAQDQYGNYVVQHVLEHGRDYERTEIITKLAGQIVQMSQHKFASNVVEKC 1020
Query: 340 LKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
L+Y V +++E L ++D+ + + D++ NYV+Q L ET + L L+
Sbjct: 1021 LEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFANYVVQKVL-ETCDESQREL---LLG 1076
Query: 395 KLQQNLDSL-RFGYGKHV 411
+++ +L +L ++ YGKH+
Sbjct: 1077 RIRVHLHALKKYTYGKHI 1094
>gi|158828189|gb|ABW81068.1| Mpt5-3 [Arabidopsis lyrata subsp. lyrata]
Length = 968
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 152/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 630 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPP 689
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD +K +K L +M
Sbjct: 690 QRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 741
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-R 275
+ G+ VV +C+E + N +FI H + L+ H GC + ++ P
Sbjct: 742 VRDQNGNHVVQKCIECVPEENI--EFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDT 799
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + L+++ GNYVVQHVLE P I L G + +S K S V
Sbjct: 800 QSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 859
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 860 VEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 916
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 917 -ILTRIKVHLNALKKYTYGKHI 937
>gi|62002537|gb|AAX58753.1| PUF-domain RNA-binding protein [Physcomitrella patens]
Length = 1118
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 152/318 (47%), Gaps = 28/318 (8%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL + + VF V ++ + + +V KF E + Q +
Sbjct: 792 DQHGSRFIQQKLETATPEDKNMVFQEVLPRALTLMTDVFGNYVIQKFFEHGTQQQRRELA 851
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALKRLFRLLMMTKPGS 223
Q+ + S+ +G I+K ++ V + L+ + + R R + G+
Sbjct: 852 NQLVGH---VLVLSLQMYGCRVIQKALEVVDVDQQTVLVSELDGHVMRCVR----DQNGN 904
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI----DEMKGPRRKQI 279
V+ +C+E + K +FI A + L+ H GC + + DE K +K I
Sbjct: 905 HVIQKCIECV--PPAKINFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQK---QKGI 959
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I + +L+++ GNYVVQHVLE Y I L G + +S K S VV+ C
Sbjct: 960 MEEILRSTCTLAQDQYGNYVVQHVLEHGRDYERTEIITKLAGQIVQMSQHKFASNVVEKC 1019
Query: 340 LKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
L+Y V +++E L ++D+ + + D++ NYV+Q L ET + L L+
Sbjct: 1020 LEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFANYVVQKVL-ETCDESQREL---LLG 1075
Query: 395 KLQQNLDSL-RFGYGKHV 411
+++ +L +L ++ YGKH+
Sbjct: 1076 RIRVHLHALKKYTYGKHI 1093
>gi|123454731|ref|XP_001315116.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121897783|gb|EAY02893.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 410
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 149/350 (42%), Gaps = 30/350 (8%)
Query: 39 PSPPVPLY------PQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPF 92
P+P +P Y S W S++G T P + I + Q P +PF
Sbjct: 32 PTPEIPKYQCCNLLSVSLWE--SITGEKTTPARIS------QIIDTFLPQPPGTVVGSPF 83
Query: 93 QHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKF 152
+S + +A+D Q LQE++ D +FNV+ ++C+ A F+ K
Sbjct: 84 YSQQSSQYVKMAKDRQDCIMLQEQIDHATPAERDTIFNVLYPHMGDLVCDGAANFLIQKL 143
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVD-KFGSSSIRKLMKAVANRPPLLDLVMKALKR 211
E NE+Q R+ L +D VQ VD G ++K +++ + P +D + AL
Sbjct: 144 CEYLNEEQQTRM-LAFFMED---VQRIVDHPNGCRVLQKFIESTTS-PSNIDPIFLALLP 198
Query: 212 LFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEM 271
F L ++ G+ + + + +I + I H L GC + D +
Sbjct: 199 RFVELCSSQNGNHIAQRFIIKI---PQRVPDIINKIKTHVYDLVVDNWGCRVIQQLFDRL 255
Query: 272 KGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
++ + A +L+ N GNYVVQ++L P I+ + + GH+ + S+ K
Sbjct: 256 PIQELIPLVDEVLCRAETLATNQFGNYVVQNILNSGTPEHIQALIDAFTGHFYEFSMHKF 315
Query: 332 GSFVVQNCLKYR-------ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQ 374
S V++ C++ I I E N +I + D++GNYVIQ
Sbjct: 316 ASNVIEKCIRKANPQQQNMIFTEIIGPEGNYNRPRIKEMVSDQFGNYVIQ 365
>gi|237506877|gb|ACQ99191.1| pumilio [Bombyx mori]
Length = 364
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 146/316 (46%), Gaps = 12/316 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VFN + + ++ + + +V KF E +
Sbjct: 31 IVEFSQDQHGSRFVQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEPGTTE 90
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++ P V++ L +
Sbjct: 91 QKTTLAQKVVQVRGHVLNLALQMYGCRVIQKALESIP--PEQQQEVVRKLDGHVLKCVKD 148
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + FI A L+ H GC + ++ + +
Sbjct: 149 QNGNHVVQKCIECV--EPSALQFIINAFAGQVYALSTHPYGCSVIQRILEHCTPEQTAPV 206
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L + GNYVVQHVLE + ++RG + LS K S VV+ C
Sbjct: 207 LNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVEKC 266
Query: 340 LKY--RITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E N + + + D++ NYV+Q +I+ P + L+ K+
Sbjct: 267 VTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQK-MIDVAEPTQRKV---LMHKI 322
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ SLR + YGKH+
Sbjct: 323 RPHIGSLRKYTYGKHI 338
>gi|403357293|gb|EJY78273.1| Pumilio [Oxytricha trifallax]
Length = 1120
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 154/337 (45%), Gaps = 46/337 (13%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+Q S+++Q++L +FN + + +++ + + +V K +E N++Q +
Sbjct: 668 DQQCSRFIQQRLEDAKDEEKQLLFNELMNDSQKLMKDVFGNYVIQKMLEYGNQNQRTMLY 727
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSV 225
QI + S D++G ++K ++ V + D ++ ++ +L + G+ V
Sbjct: 728 QQIKGN---MIPLSQDQYGCRVVQKALEVVTTQQQ--DDLIGEIRPQVQLCVEDPNGNHV 782
Query: 226 VLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISV 285
+ + +EQ+ + K FI A ++ H+ GC + ++ K + K IL +
Sbjct: 783 IQKIIEQV--SSEKVQFIVDAFKGRVYEMSVHQYGCRVIQRMLEHCKEDQIKPILVEVFE 840
Query: 286 NAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--R 343
L+++ GNYV+ HVLE + ++ + LS+ K GS V++ CL++ +
Sbjct: 841 RVLDLTKDLYGNYVISHVLEHGAQKYKTFVINKMKKRVVQLSIHKFGSNVIEKCLQHSDQ 900
Query: 344 ITVNYIVEEFL---LNSDQIFR----------VACDKYGNYVIQ-----------TALIE 379
+ I+EE + L D+ ++ V DKYGN+VIQ ALI+
Sbjct: 901 KQKDDIIEEIIQVRLMDDETYQSNSQNFTLMDVMKDKYGNFVIQRVLDISNENQRKALID 960
Query: 380 TMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIK 416
+ +LH+ + + +HV+NF++
Sbjct: 961 KILKVALHMKKHR-------------SHARHVFNFLE 984
>gi|449328595|gb|AGE94872.1| RNA-binding protein [Encephalitozoon cuniculi]
Length = 530
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 138/283 (48%), Gaps = 28/283 (9%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+++D++GS+ +Q K+ S + FN + + ++ N + +V K I E++
Sbjct: 225 ISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEEERA 284
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R+ ++ Q L SV +G ++KL+ ++ +D +++ ++ L+ + G
Sbjct: 285 RLIAKLAKQINLL---SVHPYGCRVVQKLVDVSSD----VDFILEEVRDNLLELIEDQNG 337
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+E+ N I Q E+ L+LA H+ GC + ++ + K I+ +
Sbjct: 338 NHVIQKCIEKCKDRN----IILQQFSENSLFLATHKYGCRVIQRMLEFCREDEIKNIVEV 393
Query: 283 ISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ N +L + GNYV+QH+L E E +IE I + Y +LS K S VV+
Sbjct: 394 LISNIKTLVDDQYGNYVIQHILAVGKEDEKNLVIEKI---IEKSY-ELSRCKFSSNVVEQ 449
Query: 339 CLKYRITVNYIVEEFLL-------NSDQIFRVACDKYGNYVIQ 374
C+K ++ N E FL + ++ + D YGNYV+Q
Sbjct: 450 CVK--LSNNGQRERFLAKFLEPVGSKPGMYSMCVDMYGNYVVQ 490
>gi|260942643|ref|XP_002615620.1| hypothetical protein CLUG_04502 [Clavispora lusitaniae ATCC 42720]
gi|238850910|gb|EEQ40374.1| hypothetical protein CLUG_04502 [Clavispora lusitaniae ATCC 42720]
Length = 780
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 157/334 (47%), Gaps = 28/334 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +D+ GS+++Q+KL S + + VF+ + + ++ ++ + + +V KF E ++
Sbjct: 443 VVEFTKDQHGSRFIQQKLPSATAEEKEMVFSEIQDISYDLMTDVFGNYVIQKFFEFGSDS 502
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDL--VMKALKRLFRLLM 217
Q +I L + + S+ +G +++ ++A+ PL D +++ LK
Sbjct: 503 Q-RQILLGYMKGN--IHELSLQMYGCRVVQRALEAI----PLEDQIEIVEELKDHVLSCA 555
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ + +E+I N + FI + H +L+ H GC + ++ ++
Sbjct: 556 KDQNGNHVIQKSIEKIPFENVR--FILDSLDSHIYHLSTHPYGCRVIQRLLEYSDIEDQQ 613
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
IL ++ L ++ GNYV+QH+LE P E I ++ S K S V++
Sbjct: 614 HILAELNRFLFYLIQDQYGNYVIQHILERGTPSEKEEIFEVAFSSIVNFSKHKFASNVIE 673
Query: 338 NCLKYRI--TVNYIVEEFLLNSDQIFRVAC-----------DKYGNYVIQTALIETMRPN 384
C+K+ I E +L ++ + + D+Y NYVIQ L+E
Sbjct: 674 KCIKHGTLEQRKRIWREVMLGNEDLEKETVADDSPLALMMKDQYANYVIQK-LVECFHAK 732
Query: 385 SLHLHQRLVTKLQQNLD--SLRFGYGKHVYNFIK 416
S + LV KL+Q L S++ YGKH+ + K
Sbjct: 733 SKE-KKDLVVKLRQYLKQLSMKNSYGKHLASVEK 765
>gi|350585829|ref|XP_003482059.1| PREDICTED: pumilio homolog 1 isoform 1 [Sus scrofa]
Length = 640
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 157/330 (47%), Gaps = 18/330 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 307 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 366
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 367 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 421
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 422 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 479
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 480 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 539
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 540 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 595
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ ++N
Sbjct: 596 HKIRPHIATLRKYTYGKHILAKLEKYYMKN 625
>gi|449710016|gb|EMD49164.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 476
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 148/308 (48%), Gaps = 19/308 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+ D+ G +YLQ +L + + +F + ++ + + ++ K IE N +Q +
Sbjct: 158 MCHDQYGCRYLQRQLEDNNPQTTKCIFEQMLPIITLLMSDPFGNYLCQKLIEVVNSEQRI 217
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+I +IT F S + G+ SI+KL+ + + ++++ + L+ G
Sbjct: 218 QIITKITP---TFFIISKNIHGTRSIQKLISCYSTKEEQ-NMLINVISPYVIELIFDSNG 273
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALE--HCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
+ V+ +CL+ + N FI+ A + + + +A H+ GC + ID R+Q++
Sbjct: 274 NHVIQECLKTF--GKSDNGFIFDAIVSDGNLVKVATHKHGCCVVQRCIDY---GNRQQLI 328
Query: 281 YLIS---VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
LI N+ L ++ GNYVVQ++L ++ +I + L IDLS+ K S V++
Sbjct: 329 TLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVINDVTKMLLDDLIDLSMQKFSSNVIE 388
Query: 338 NCLKY-RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
++ I ++ + L + ++ D Y NYVIQT L ++ S+ H +L +
Sbjct: 389 KLVRSDEIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCLDQS----SVEYHSKLSNWI 444
Query: 397 QQNLDSLR 404
+L ++R
Sbjct: 445 IPHLSAIR 452
>gi|320166165|gb|EFW43064.1| pumilio [Capsaspora owczarzaki ATCC 30864]
Length = 1003
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 154/334 (46%), Gaps = 28/334 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ A D+ GS+ +Q++L + R + VF+ + ++ + + +V K E
Sbjct: 539 VVEFASDQHGSRCIQQRLETATEREKNLVFDEILPHALHLMTDVFGNYVIQKLFEHGTAA 598
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
L + ++ ++ S+ +G I+K ++++ P +++ L+ + +
Sbjct: 599 HRLELARRLEGH---ILRLSLQMYGCRVIQKAVESIPE--PQQVALVRELEGSVIMCVKD 653
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+EQ+ + + F+ + L+ H GC + ++ + +
Sbjct: 654 QNGNHVVQKCIEQVPAMHLQ--FVVDSFRGLVPSLSTHPYGCRVIQRILEHCTPTQVMSM 711
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICF-SLRGHYIDLSLTKCGSFVVQN 338
L + N + L ++ GNYV+QHVLE P + I ++RG + LS K S VV+
Sbjct: 712 LQEVLGNCSRLIQDQYGNYVIQHVLE-HGPQEAKAIVLDAMRGRIVPLSQHKFASNVVEK 770
Query: 339 CLKYRITVNYI--VEEFLLNSD------QIFRVACDKYGNYVIQTAL---IETMRPNSLH 387
C+ + + + + E L+ SD + + D + NYV+Q L E R
Sbjct: 771 CIVHSADLERVALINEILVQSDPGSPTSALLAMMRDPFANYVVQKMLDVACEDQR----- 825
Query: 388 LHQRLVTKLQQNLDSLR-FGYGKHVYNFIKDCDL 420
+L+ +++ N+ SLR + YGKH+ ++ +
Sbjct: 826 --NQLIARIRPNILSLRKYTYGKHIIAKVEKAPI 857
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 13/230 (5%)
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K +E +L +TL T V+ + D+ GS I++ ++ R +LV +
Sbjct: 517 KLLEEFRNSRLPDLTL--TQLKDHVVEFASDQHGSRCIQQRLETATER--EKNLVFDEIL 572
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALE-HCLYLACHEQGCINMNNFID 269
LM G+ V+ + E H + LE H L L+ GC + ++
Sbjct: 573 PHALHLMTDVFGNYVIQKLFE---HGTAAHRLELARRLEGHILRLSLQMYGCRVIQKAVE 629
Query: 270 EMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLT 329
+ P++ ++ + + ++ +GN+VVQ +E ++ + S RG LS
Sbjct: 630 SIPEPQQVALVRELEGSVIMCVKDQNGNHVVQKCIEQVPAMHLQFVVDSFRGLVPSLSTH 689
Query: 330 KCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
G V+Q L++ V +++E L N ++ + D+YGNYVIQ L
Sbjct: 690 PYGCRVIQRILEHCTPTQVMSMLQEVLGNCSRLIQ---DQYGNYVIQHVL 736
>gi|297790299|ref|XP_002863049.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
lyrata]
gi|297308854|gb|EFH39308.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
lyrata]
Length = 503
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 152/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 170 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPP 229
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD +K +K L +M
Sbjct: 230 QRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 281
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-R 275
+ G+ VV +C+E + N +FI H + L+ H GC + ++ P
Sbjct: 282 VRDQNGNHVVQKCIECVPEENI--EFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDT 339
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + L+++ GNYVVQHVLE P I L G + +S K S V
Sbjct: 340 QSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 399
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 400 VEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 456
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 457 -ILTRIKVHLNALKKYTYGKHI 477
>gi|443921904|gb|ELU41432.1| pumilio-family RNA binding protein [Rhizoctonia solani AG-1 IA]
Length = 1002
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 55/325 (16%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L +D+ G +YLQ+KL G V E + + ++ K +E ++
Sbjct: 572 IPALCKDQHGCRYLQKKLEEG-----------VPEH------HPFGNYLCQKLLEYSTDE 614
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANR----PPLLDL----VMKALKR 211
Q I + V S++ G+ +++K++ ++ + P D ++ AL
Sbjct: 615 QRNMICESVAHD---LVGISLNMHGTRAVQKMIDFLSTQRQANPSSYDAQIHSIIMALSM 671
Query: 212 LFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEM 271
L+ G+ V+ +CL ++ +N+ FIY A HC+ +A H GC + ID
Sbjct: 672 HVVTLIKDLNGNHVIQKCLNRLIPEDNQ--FIYNAVAAHCVEVATHRHGCCVLQRCIDHA 729
Query: 272 KGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
+R Q++ I+ NA +L ++ GNYV H + + G+ LS+ K
Sbjct: 730 SDSQRIQLVTEITFNALTLVQDPYGNYVSCHTSR------TDAVIRQFIGNVCALSVQKF 783
Query: 332 GSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LI 378
S V++ C++ T ++EE LLN +++ ++ D +GNY +QTA L+
Sbjct: 784 SSNVIEKCIRVAEHNTRKMLIEE-LLNRNRLEKLLRDSFGNYCVQTALDYAEPTQRMLLV 842
Query: 379 ETMRP-----NSLHLHQRLVTKLQQ 398
E +RP + +R+ +KLQ+
Sbjct: 843 EGIRPILPLIRNTPYGKRIQSKLQR 867
>gi|440291461|gb|ELP84730.1| meiotic coiled-coil protein, putative [Entamoeba invadens IP1]
Length = 470
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 154/324 (47%), Gaps = 24/324 (7%)
Query: 73 YETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVV 132
++T + +FQ P F + +D+ G ++LQ++L G++ L+ ++ +
Sbjct: 135 FQTFSPQSFQNPENFPK-------------MCRDQVGCRFLQQQLEEGNTGTLEYIYQQI 181
Query: 133 SEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLM 192
++ + + ++ K IE DQ + I +I + S + +G+ S++KL+
Sbjct: 182 VPLLDSLMIDPFGNYLCQKLIEVVKPDQRVEIIEEIGDKIHTI---SRNIYGTRSVQKLI 238
Query: 193 KAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEH-- 250
+ +++ + +L+ K L+ L+ G+ V+ +CL+ +N FI+ A LE+
Sbjct: 239 NSASSKNEV-NLIRKYLEPYVINLIFDINGNHVIQECLK--VFDKPENSFIFDAILENGN 295
Query: 251 CLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPY 310
+ ++ H+ GC + ID + ++ I + +L ++ GNYVVQ+VL +E
Sbjct: 296 LVRVSSHKHGCCVVQRCIDNGNEEQLSSLVNDIVKYSLALVKDAFGNYVVQYVLGIEGVS 355
Query: 311 LIETICFSLRGHYIDLSLTKCGSFVVQNCLKY-RITVNYIVEEFLLNSDQIFRVACDKYG 369
+ T C + + I+LS+ K S V++ + V I+ E L + + D +
Sbjct: 356 VRVTNC--IIENLIELSMQKFSSNVIEKLVATGNCKVKEIIFEQFLKFKDVAILLQDSFA 413
Query: 370 NYVIQTALIETMRPNSLHLHQRLV 393
NYVIQT L ++ L L ++
Sbjct: 414 NYVIQTCLDKSWGEYKLRLSNWII 437
>gi|225448992|ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
gi|296085990|emb|CBI31431.3| unnamed protein product [Vitis vinifera]
Length = 1026
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 157/327 (48%), Gaps = 24/327 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + K+F + + ++ + + +V KF E E
Sbjct: 696 VIEFSTDQYGSRFIQQKLETATVDEKIKIFPEIIPHSHTLMTDVFGNYVIQKFFEHGTES 755
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++T + S+ +G I+K ++ V +D + + L +M
Sbjct: 756 QRQALASELTGH---ILPLSLQMYGCRVIQKALEVVD-----VDRQTQMVAELDGSVMKC 807
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + ++ FI + + L+ H GC + ++
Sbjct: 808 VRDQNGNHVIQKCIECVPQ--DRIQFIISSFYGQVVSLSTHPYGCRVIQRVLEHCDDSST 865
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+QI+ I + L+ + GNYV+QHVL+ P+ I L G + +S K S V
Sbjct: 866 QQIIMDEIMQSVCILAHDQYGNYVIQHVLQYGKPHERSAIISKLAGQIVKMSQQKFASNV 925
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L ++D+ + + D +GNYV+Q +IET + L
Sbjct: 926 VEKCLTFGGPEERQLLVTEMLGSTDENEPLQIMMKDPFGNYVVQ-KVIETCDDQTREL-- 982
Query: 391 RLVTKLQQNLDSL-RFGYGKHVYNFIK 416
++++++ +L++L R+ YGKH+ + ++
Sbjct: 983 -ILSRIKVHLNTLKRYTYGKHIVSRVE 1008
>gi|297845132|ref|XP_002890447.1| hypothetical protein ARALYDRAFT_335400 [Arabidopsis lyrata subsp.
lyrata]
gi|297336289|gb|EFH66706.1| hypothetical protein ARALYDRAFT_335400 [Arabidopsis lyrata subsp.
lyrata]
Length = 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 3/176 (1%)
Query: 239 KNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRNFSGN 297
K + IY+ L + LY+A + GC+ +N+ I + K L+ +I+ A LS + GN
Sbjct: 157 KKEAIYERILHYALYIARDKHGCLALNDIITDADDLYYKNKLFDVIAHKAILLSNDAYGN 216
Query: 298 YVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNS 357
+V+Q VL+L D I SLRGH++DLS+ + GS++V N L +V E LL
Sbjct: 217 FVIQQVLKLNDLRCKNNIVASLRGHFVDLSIQRYGSYIV-NLLLETEESMVVVVEELLEG 275
Query: 358 DQIFRVACDKYGNYVIQTALIETMRPN-SLHLHQRLVTKLQQNLDSLRFGYGKHVY 412
D + R+ + YGN+V+ AL T + L+ LV KL+ + LR G + +
Sbjct: 276 DMLMRLTRNVYGNFVVCKALRVTQKEMVRTDLYWGLVHKLKPFHNPLRRSRGSNSW 331
>gi|169597459|ref|XP_001792153.1| hypothetical protein SNOG_01515 [Phaeosphaeria nodorum SN15]
gi|111070044|gb|EAT91164.1| hypothetical protein SNOG_01515 [Phaeosphaeria nodorum SN15]
Length = 917
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 143/292 (48%), Gaps = 22/292 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ A D+ GS+++Q+KL + +S +++F + + Q++ + + +V KF E ++
Sbjct: 527 VVEFAGDQHGSRFIQQKLETANSEVKERIFKELESNSLQLMQDVFGNYVIQKFFEHGDQT 586
Query: 160 QLLRITLQITSQDQLFVQASVDK-FGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
Q +I + S+ + V A ++ + ++K ++ V L+D +K L + ++
Sbjct: 587 QK-KI---LASKMKGHVSALANQMYACRVVQKALEHV-----LVDQQASMVKELEKDVLK 637
Query: 219 T---KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
T + G+ V+ + ++++ + + I ++ H LA + GC + ++++ P+
Sbjct: 638 TVKDQNGNHVIQKVIDRVPMEHIQ--VIVESFRGHIGVLAVNSYGCRVIQRLLEKVPEPQ 695
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
R+ I+ + A L + GNYV QHV+E P I + ++ S K S V
Sbjct: 696 RRFIMTELHARGADLITDSYGNYVTQHVIEHGLPEDRAKIVSLITAQFLTFSKHKFASNV 755
Query: 336 VQNCL------KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETM 381
V+ CL + R VN + + + + + D YGNYVIQ L+ET+
Sbjct: 756 VERCLVCSDDEQRRELVNAFIAKNERGENNLLNLLKDGYGNYVIQ-KLLETL 806
>gi|289449229|dbj|BAI77478.1| pumilio [Bombyx mori]
Length = 416
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 147/316 (46%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VFN + + ++ + + +V KF E +
Sbjct: 86 IVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEFGTTE 145
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +GS I+K ++++ P V++ L +
Sbjct: 146 QKTTLAQKVRGH---VLNLALQMYGSRVIQKALESIP--PEQQQEVVRELDGHVLKCVKD 200
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + FI A L+ H GC + ++ + +
Sbjct: 201 QNGNHVVQKCIECV--EPSALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTPEQTAPV 258
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L + GNYVVQHVLE + ++RG + LS K S VV+ C
Sbjct: 259 LNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVEKC 318
Query: 340 LKY--RITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E N + + + D++ NYV+Q +I+ P + L+ K+
Sbjct: 319 VTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQK-MIDVAEPTQRKV---LMHKI 374
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ SLR + YGKH+
Sbjct: 375 RPHIGSLRKYTYGKHI 390
>gi|327355572|gb|EGE84429.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis ATCC
18188]
Length = 906
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 145/322 (45%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q L S +S D+VF + + Q++ + + +V K E N+
Sbjct: 493 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQS 552
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 553 QKRILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKC 604
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A A H GC + ++ K P R
Sbjct: 605 VNDQNGNHVIQKAVERVPTVHIR--FIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPDR 662
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + AASL + GNYV+QHV+E + + I + + S K S VV
Sbjct: 663 QAILAELHACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNVV 722
Query: 337 QNCLKYRITVNY--IVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ +++ I+ + +D+ + + D+YGNYV+QT L E P +
Sbjct: 723 EKSIEFGAEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKGPE----RE 778
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
LV +++ L L + YGK +
Sbjct: 779 ALVKQIELQLPELKKTNYGKQI 800
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
V+ L + + N+KN Y+ H + + + G + + ++ + Q+
Sbjct: 465 VIRSPLLEEFRINSKNSKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFRE 524
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I N+ L + GNYVVQ + E + + ++GH + LS G VVQ L++
Sbjct: 525 IQPNSLQLMTDVFGNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEH 584
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 585 ILTDQQASMVKEL---ENHVLKCVNDQNGNHVIQKAV 618
>gi|20465637|gb|AAM20149.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
Length = 972
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 154/325 (47%), Gaps = 30/325 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + S + V+ + ++ + + +V KF E
Sbjct: 639 VVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPP 698
Query: 160 QLLRITLQITSQDQLF---VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
Q + D+LF + S+ +G I+K ++ V LD +K +K L +
Sbjct: 699 QRRELA------DKLFDNVLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHV 747
Query: 217 MM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
M + G+ VV +C+E + N +FI + + L+ H GC + ++
Sbjct: 748 MRCVRDQNGNHVVQKCIECVPEENI--EFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHD 805
Query: 274 P-RRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
P + +++ I + L+++ GNYV+QHVLE P I L G + +S K
Sbjct: 806 PDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFA 865
Query: 333 SFVVQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL + ++V E L +D+ + + D++ NYV+Q L ET
Sbjct: 866 SNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQRE 924
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHV 411
L ++ +++ +L++L ++ YGKH+
Sbjct: 925 L---ILGRIKVHLNALKKYTYGKHI 946
>gi|15227051|ref|NP_180482.1| pumilio 2 [Arabidopsis thaliana]
gi|334184556|ref|NP_001189630.1| pumilio 2 [Arabidopsis thaliana]
gi|75217075|sp|Q9ZW06.1|PUM2_ARATH RecName: Full=Pumilio homolog 2; Short=APUM-2; Short=AtPUM2
gi|3980413|gb|AAC95216.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253126|gb|AEC08220.1| pumilio 2 [Arabidopsis thaliana]
gi|330253127|gb|AEC08221.1| pumilio 2 [Arabidopsis thaliana]
Length = 972
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 154/325 (47%), Gaps = 30/325 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + S + V+ + ++ + + +V KF E
Sbjct: 639 VVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPP 698
Query: 160 QLLRITLQITSQDQLF---VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
Q + D+LF + S+ +G I+K ++ V LD +K +K L +
Sbjct: 699 QRRELA------DKLFDNVLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHV 747
Query: 217 MM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
M + G+ VV +C+E + N +FI + + L+ H GC + ++
Sbjct: 748 MRCVRDQNGNHVVQKCIECVPEENI--EFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHD 805
Query: 274 P-RRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
P + +++ I + L+++ GNYV+QHVLE P I L G + +S K
Sbjct: 806 PDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFA 865
Query: 333 SFVVQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL + ++V E L +D+ + + D++ NYV+Q L ET
Sbjct: 866 SNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQRE 924
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHV 411
L ++ +++ +L++L ++ YGKH+
Sbjct: 925 L---ILGRIKVHLNALKKYTYGKHI 946
>gi|239614575|gb|EEQ91562.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis ER-3]
Length = 932
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 145/322 (45%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q L S +S D+VF + + Q++ + + +V K E N+
Sbjct: 519 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQS 578
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 579 QKRILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKC 630
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A A H GC + ++ K P R
Sbjct: 631 VNDQNGNHVIQKAVERVPTVHIR--FIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPDR 688
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + AASL + GNYV+QHV+E + + I + + S K S VV
Sbjct: 689 QAILAELHACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNVV 748
Query: 337 QNCLKYRITVNY--IVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ +++ I+ + +D+ + + D+YGNYV+QT L E P +
Sbjct: 749 EKSIEFGAEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKGPE----RE 804
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
LV +++ L L + YGK +
Sbjct: 805 ALVKQIELQLPELKKTNYGKQI 826
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
V+ L + + N+KN Y+ H + + + G + + ++ + Q+
Sbjct: 491 VIRSPLLEEFRINSKNSKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFRE 550
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I N+ L + GNYVVQ + E + + ++GH + LS G VVQ L++
Sbjct: 551 IQPNSLQLMTDVFGNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEH 610
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 611 ILTDQQASMVKEL---ENHVLKCVNDQNGNHVIQKAV 644
>gi|261196167|ref|XP_002624487.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis SLH14081]
gi|239587620|gb|EEQ70263.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis SLH14081]
Length = 932
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 145/322 (45%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q L S +S D+VF + + Q++ + + +V K E N+
Sbjct: 519 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQS 578
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 579 QKRILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKC 630
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A A H GC + ++ K P R
Sbjct: 631 VNDQNGNHVIQKAVERVPTVHIR--FIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPDR 688
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + AASL + GNYV+QHV+E + + I + + S K S VV
Sbjct: 689 QAILAELHACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNVV 748
Query: 337 QNCLKYRITVNY--IVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ +++ I+ + +D+ + + D+YGNYV+QT L E P +
Sbjct: 749 EKSIEFGAEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKGPE----RE 804
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
LV +++ L L + YGK +
Sbjct: 805 ALVKQIELQLPELKKTNYGKQI 826
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
V+ L + + N+KN Y+ H + + + G + + ++ + Q+
Sbjct: 491 VIRSPLLEEFRINSKNSKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFRE 550
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I N+ L + GNYVVQ + E + + ++GH + LS G VVQ L++
Sbjct: 551 IQPNSLQLMTDVFGNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEH 610
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 611 ILTDQQASMVKEL---ENHVLKCVNDQNGNHVIQKAV 644
>gi|430811325|emb|CCJ31248.1| unnamed protein product [Pneumocystis jirovecii]
Length = 995
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 103/196 (52%), Gaps = 8/196 (4%)
Query: 184 GSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFI 243
G+ +++K+++ ++ P + +V+ AL L+ G+ V+ +CL ++ N+ FI
Sbjct: 3 GTRAVQKMIEYLST-PEQIKIVINALNSSVVTLIKDLNGNHVIQKCLNKL--SNDDIQFI 59
Query: 244 YQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHV 303
+ A +C+ +A H GC + ID ++ QI I+ +A +L ++ GNYVVQ++
Sbjct: 60 FDAICSNCIEVATHRHGCCVLQRCIDHASDSQKVQIAKEITNHALNLVQDPFGNYVVQYI 119
Query: 304 LELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR--ITVNYIVEEFLLNSDQIF 361
L+L D E + G+ LS+ K S V++ C++ T + ++EE +
Sbjct: 120 LDLGDARFSEPLIHRFIGNICLLSVQKFSSNVIEKCIRMAEPPTRSLLIEELPKKIGSLI 179
Query: 362 RVACDKYGNYVIQTAL 377
R D Y NYVIQT+L
Sbjct: 180 R---DSYANYVIQTSL 192
>gi|15227052|ref|NP_180483.1| pumilio 1 [Arabidopsis thaliana]
gi|75217076|sp|Q9ZW07.1|PUM1_ARATH RecName: Full=Pumilio homolog 1; Short=APUM-1; Short=AtPUM1
gi|3980412|gb|AAC95215.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253128|gb|AEC08222.1| pumilio 1 [Arabidopsis thaliana]
Length = 968
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 153/327 (46%), Gaps = 24/327 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 635 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLPP 694
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD +K +K L +M
Sbjct: 695 QRRELAEKLFDH---VLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 746
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-R 275
+ G+ VV +C+E + N +FI H + L+ H GC + ++ P
Sbjct: 747 VRDQNGNHVVQKCIECVPEENI--EFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDT 804
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + L+++ GNYVVQHVLE P I L G + +S K S V
Sbjct: 805 QSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 864
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 865 VEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 921
Query: 391 RLVTKLQQNLDSL-RFGYGKHVYNFIK 416
++T+++ +L +L ++ YGKHV I+
Sbjct: 922 -ILTRIKVHLTALKKYTYGKHVVARIE 947
>gi|15227038|ref|NP_180478.1| pumilio 3 [Arabidopsis thaliana]
gi|75217073|sp|Q9ZW02.1|PUM3_ARATH RecName: Full=Pumilio homolog 3; Short=APUM-3; Short=AtPUM3
gi|3980417|gb|AAC95220.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253122|gb|AEC08216.1| pumilio 3 [Arabidopsis thaliana]
Length = 964
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 152/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 631 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKFFEHGLPP 690
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD ++ +K L +M
Sbjct: 691 QRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEVVD-----LDQKIQMVKELDGHVMRC 742
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-R 275
+ G+ VV +C+E + N +FI H + L+ H GC + ++ P
Sbjct: 743 VRDQNGNHVVQKCIECVPEENI--EFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDT 800
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + L+++ GNYVVQHVLE P I L G + +S K S V
Sbjct: 801 QSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 860
Query: 336 VQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 861 VEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 917
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 918 -ILTRIKVHLNALKKYTYGKHI 938
>gi|290973641|ref|XP_002669556.1| Pumilio/Puf RNA-binding protein [Naegleria gruberi]
gi|284083105|gb|EFC36812.1| Pumilio/Puf RNA-binding protein [Naegleria gruberi]
Length = 788
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 148/331 (44%), Gaps = 19/331 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ ++D+ GS+++Q+KL + + +F + + ++ + + +V KF E N
Sbjct: 466 VVEFSRDQHGSRFIQQKLEKASNSEKELIFKEIQPYALSLMTDVFGNYVIQKFFEFGNAP 525
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +++ ++ + ++ +G I+K ++ + N D V+ LK +
Sbjct: 526 QKKKLSKELQGN---VLNLTLQTYGCRVIQKALEVIDND--DKDTVVSELKGNVMRCVQD 580
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ +C+E++ + FI A H GC + ++ + I
Sbjct: 581 QNGNHVIQKCIERVPPKIIQ--FIVDGFKGKVYEQAIHNYGCRVIQRILEHCTEGQTVPI 638
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L I N +L + GNYVVQHVL+ P I +L +LS+ K S V++ C
Sbjct: 639 LQEILDNILALVVDPYGNYVVQHVLDRGKPTFKSLIIAALSKKIQELSINKFASNVIEKC 698
Query: 340 LKY--RITVNYIVEEFL-------LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ + + ++ E + ++ +F + D++ NYVIQ +IET +
Sbjct: 699 FQQANKKERDNMITELIGDITSRDISETPLFAMMKDQFANYVIQ-KIIETCDASQRKTIT 757
Query: 391 RLVTKLQQNLDSLRFGYGKHVYNFIKDCDLQ 421
V Q+ + L YGKH+ + I+ + Q
Sbjct: 758 EAVKPHQEKIKKL--PYGKHILSTIEKVNEQ 786
>gi|403340179|gb|EJY69363.1| Pumilio [Oxytricha trifallax]
Length = 1146
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 159/332 (47%), Gaps = 28/332 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ A D+ GS+++Q+K S + +FN + +F ++ + + +V K E E+
Sbjct: 677 IVECAMDQYGSRFIQQKYDITSSAEKELIFNEILPESFNLMNDVFGNYVVQKLFEYGTEE 736
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ Q+ ++ + +G ++K ++ ++ +++ LK +
Sbjct: 737 HRSTLAEQLLGN---VLKLTKSMYGCRVVQKALEVISLH--QQKILVSELKDNIIDCIND 791
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ +C+E++ + +FI + +E L H GC + ++ + I
Sbjct: 792 QNGNHVIQKCIEKM--PCDDIEFIIKPVIEKTSELCVHTYGCRVIQRVLENSNEAYTRSI 849
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLE----LEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ I + +L+ + GNYV+QH+LE ED + + S++G I+LS K S V
Sbjct: 850 IEGILNDLHNLTMDQFGNYVIQHILENGKVQEDK---DRVVKSIKGKVIELSNHKFASNV 906
Query: 336 VQNCLKYRITVNY--IVEEFL-LNSDQ---------IFRVACDKYGNYVIQTALIETMRP 383
V+ CL+Y + ++EEFL LN D+ ++++ D+YGNYVIQ IE +
Sbjct: 907 VEKCLQYASEKDKAELIEEFLDLNFDEEAAMNQNGVLYQMMKDRYGNYVIQKC-IEVSQG 965
Query: 384 NSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFI 415
+ + +T N+ + Y +HVYNFI
Sbjct: 966 KQREILMKRITAC-ANILKKQANYSRHVYNFI 996
>gi|356557841|ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1054
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 157/325 (48%), Gaps = 30/325 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 724 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPQALALMTDVFGNYVVQKFFEHGLAS 783
Query: 160 QLLRITLQITSQDQLF---VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
Q + ++LF + S+ +G I+K ++ V LD +K ++ L +
Sbjct: 784 QRRELA------NKLFEHVLTLSLQMYGCRVIQKAIEVVD-----LDQKIKMVQELDGNI 832
Query: 217 MM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
M + G+ V+ +C+E + + +FI + + L+ H GC + ++ K
Sbjct: 833 MRCVRDQNGNHVIQKCIECVPE--DAINFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKD 890
Query: 274 PRRKQILYLISVNAAS-LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
P +Q + + A S L+++ GNYVVQHVLE P+ I L G + +S K
Sbjct: 891 PNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFA 950
Query: 333 SFVVQNCLKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL + +V E L ++D+ + + D++ NYV+Q L ET
Sbjct: 951 SNVVEKCLTFGGPSERQLLVNEMLGSTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQRE 1009
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHV 411
L ++++++ +L++L ++ YGKH+
Sbjct: 1010 L---ILSRIKVHLNALKKYTYGKHI 1031
>gi|79609613|ref|NP_974618.2| pumilio 6 protein [Arabidopsis thaliana]
gi|332659728|gb|AEE85128.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 855
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 151/326 (46%), Gaps = 32/326 (9%)
Query: 110 SQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQIT 169
S+++Q+KL + VF + +++ + + +V KF E N Q + Q+
Sbjct: 541 SRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLM 600
Query: 170 SQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQC 229
Q V S+ +G I+K + + P + + L + + G+ V+ +C
Sbjct: 601 GQ---IVPLSLQMYGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRDQNGNHVIQKC 655
Query: 230 LEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR-----KQILYLIS 284
+E I +K F+ A L+ H GC + ++ + ++IL +
Sbjct: 656 IENI--PADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVC 713
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY-- 342
V LS++ GNYV QHVLE E I L GH + LSL K S V++ CL+Y
Sbjct: 714 V----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGG 769
Query: 343 RITVNYIVEEFLLNSDQIFR----VACDKYGNYVIQTALIETMRPNSLHLHQRLV--TKL 396
R+ + I++E + D+ + + D+YGNYV+Q + ET + QRL +++
Sbjct: 770 RVERDLIIKE-IAGPDESYNSLLMMMKDQYGNYVVQK-IFETCTAD-----QRLTLFSRV 822
Query: 397 QQNLDSL-RFGYGKHVYNFIKDCDLQ 421
+ + +L ++ YGKH+ + ++ ++
Sbjct: 823 RMHASALKKYTYGKHIVSRLEQPSIE 848
>gi|79325269|ref|NP_001031720.1| pumilio 6 protein [Arabidopsis thaliana]
gi|332659729|gb|AEE85129.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 858
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 30/326 (9%)
Query: 110 SQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQIT 169
S+++Q+KL + VF + +++ + + +V KF E N Q + Q+
Sbjct: 541 SRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLM 600
Query: 170 SQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQC 229
Q V S+ +G I+K + + P + + L + + G+ V+ +C
Sbjct: 601 GQ---IVPLSLQMYGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRDQNGNHVIQKC 655
Query: 230 LEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR-----KQILYLIS 284
+E I +K F+ A L+ H GC + ++ + ++IL +
Sbjct: 656 IENI--PADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVC 713
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY-- 342
V LS++ GNYV QHVLE E I L GH + LSL K S V++ CL+Y
Sbjct: 714 V----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGG 769
Query: 343 RITVNYIVEEFLLNSD---QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV--TKLQ 397
R+ + I++E + + + D+YGNYV+Q + ET + QRL ++++
Sbjct: 770 RVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQK-IFETCTAD-----QRLTLFSRVR 823
Query: 398 QNLDSL-RFGYGKHVYNFIKDCDLQN 422
+ +L ++ YGKH+ + ++ ++
Sbjct: 824 MHASALKKYTYGKHIVSRLEQPSIEG 849
>gi|332254530|ref|XP_003276382.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1 [Nomascus
leucogenys]
Length = 1222
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 150/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++ K+ VFN + + + ++ + + +V KF E + +
Sbjct: 889 IMEFSQDQHGSRFISXKMERATPAERQLVFNEILQAAYPLMVDVFGHYVIQKFFEFGSLE 948
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 949 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 1003
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 1004 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1061
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1062 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1121
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1122 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1177
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1178 HKIRPHIATLRKYTYGKHI 1196
>gi|167389199|ref|XP_001738858.1| pumilio [Entamoeba dispar SAW760]
gi|165897686|gb|EDR24768.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 440
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 178/390 (45%), Gaps = 27/390 (6%)
Query: 35 NEIHPSPP-VP---LYPQSTWA---VPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGF 87
N ++ +PP +P + ++T A PS S+ +S P Y+ S++ + +
Sbjct: 60 NAVYNAPPFIPRRKISSKTTSANCISPSFYQMSSRVKQLVSSPPTYKKSNSTSITSHI-- 117
Query: 88 QANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARF 147
Q N + L +D+QGS+ +Q LT+ + ++F+ + ++++ + + +
Sbjct: 118 ---KIQQTNNYTVTDLCKDQQGSRRIQTFLTTAKEFEITELFDSIKGDLYELMNDLFGNY 174
Query: 148 VFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMK 207
V KFIE N D+L + I V+ S +G I+K+++ + +
Sbjct: 175 VVQKFIELGN-DKLRQFVHSIIRGR--VVELSKHMYGCRVIQKVIERSNTNEN--ERIFN 229
Query: 208 ALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNF 267
+++ L+ + G+ V+ + +E + K + Q +E + H GC M
Sbjct: 230 EIEKSIIELIEDQNGNHVIQKIIENYWECIEKILYALQGQIEK---YSGHGFGCRVMQRI 286
Query: 268 IDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
I++ QI + N LS N GNYV+QH+LE + + E I + + + S
Sbjct: 287 IEKRFDNFNNQIFQELQGNIIVLSMNQFGNYVIQHLLEFGNDIIREAIINEVEHVFFESS 346
Query: 328 LTKCGSFVVQNCLKYRITVN---YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPN 384
L K S V++ C+++ + I + F + D I+++ D + NYV+Q TM N
Sbjct: 347 LLKFSSNVMEKCVQFGPSNKQQILIKKLFDCSDDMIYKMMKDPFANYVLQRMF--TMMNN 404
Query: 385 SLHLHQRLVTKLQQNLDSLRFG-YGKHVYN 413
L Q + +Q+N+ SLR Y KH+ N
Sbjct: 405 DQRL-QFYTSYVQRNITSLRKNIYAKHLLN 433
>gi|253741511|gb|EES98380.1| Pumilio-family RNA-binding protein, putative [Giardia intestinalis
ATCC 50581]
Length = 652
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 159/361 (44%), Gaps = 28/361 (7%)
Query: 66 SGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTS--GDSR 123
S S+P + + T++ P+ Q +P ++L ++ G + LQ+ + S
Sbjct: 291 SALSDP-HNSATTAFSSEPVAPQPDPLAGEHERKLVLSFKESTGCKALQQYMVDFPDKSH 349
Query: 124 FLDKVFNVVSEFTFQ-----IICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQA 178
+L VF ++E+ ++ + + F K IE + Q LRI L I QD LF
Sbjct: 350 YLLDVF--ITEYGTPSLMEGLLIHPAGNYCFQKIIEGSDATQRLRILLLI--QDSLF-DI 404
Query: 179 SVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHH 236
+ G+ SI+KL++ V+ + + R+ +L+M G+ V +C+E
Sbjct: 405 CHNLHGTRSIQKLLERVSLDEEKAIFAQQLGTGDRIIKLIMDIN-GNHCVQRCIEAFSPK 463
Query: 237 NNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSG 296
+ FIY + + ++ H+ GC + +D +R QI+ I + L + G
Sbjct: 464 DCA--FIYSQIVRELVLVSTHQHGCCIIQRCLDLCSEAQRVQIVTAIKDHVMELIVDRFG 521
Query: 297 NYVVQHVLE-----LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY-RITVNYIV 350
NYV Q+ LE L P + + + G L K S ++ CLKY + ++
Sbjct: 522 NYVFQYSLEKASNGLCGPITTDDLIRPVLGQEAFLVNQKFSSHAIEKCLKYGSKKMRALI 581
Query: 351 EEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKH 410
E ++ S +A DK+GNYVIQ A + + QR++ + + + Y +H
Sbjct: 582 TENVMASGSFLSLAMDKFGNYVIQKAFCDATDEQKKIISQRVLA----SPEVMSCSYSRH 637
Query: 411 V 411
+
Sbjct: 638 L 638
>gi|14277944|pdb|1IB2|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
gi|23200484|pdb|1M8Z|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
gi|24159005|pdb|1M8W|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
gi|24159006|pdb|1M8W|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
gi|24159011|pdb|1M8X|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
gi|24159012|pdb|1M8X|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
gi|24159015|pdb|1M8Y|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
gi|24159016|pdb|1M8Y|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
gi|326327989|pdb|3Q0L|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
gi|326327990|pdb|3Q0L|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
gi|326327993|pdb|3Q0M|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
gi|326327994|pdb|3Q0M|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
gi|326327997|pdb|3Q0N|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326327998|pdb|3Q0N|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328001|pdb|3Q0O|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328002|pdb|3Q0O|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328005|pdb|3Q0P|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
gi|326328006|pdb|3Q0P|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
Length = 349
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 150/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 26 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 85
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 86 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQ--NEMVRELDGHVLKCVKD 140
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 141 QNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 198
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 199 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 258
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 259 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 314
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 315 HKIRPHIATLRKYTYGKHI 333
>gi|178847547|pdb|3BSB|A Chain A, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
gi|178847548|pdb|3BSB|B Chain B, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
gi|178847550|pdb|3BSX|A Chain A, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
gi|178847551|pdb|3BSX|B Chain B, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
Length = 343
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 150/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 26 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 85
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 86 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQ--NEMVRELDGHVLKCVKD 140
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 141 QNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 198
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 199 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 258
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 259 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 314
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 315 HKIRPHIATLRKYTYGKHI 333
>gi|223994913|ref|XP_002287140.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976256|gb|EED94583.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 300
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 143/296 (48%), Gaps = 22/296 (7%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L++D+ G + LQ+ L + N F + + + + ++F K +E ++
Sbjct: 13 LSRDQVGCRLLQQALDEDGPSAATAILNEGLTFWAEAMVDPFGNYLFQKILERITPEE-- 70
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R+ L + S V AS++ G+ S++K++++ + ++ AL+ L + G
Sbjct: 71 RVIL-VKSVSTRLVNASLNLHGTRSVQKIVES-KKQDTAAKILTDALEPSAARLCIDSHG 128
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ + + L ++ + + FI+ A +A H GC + +D R ++
Sbjct: 129 NHAIQRILLKLPYQYTQ--FIFDAVAASVEDVARHRHGCCVIQRCLDSRHSVARSHLVTR 186
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I + L ++ GNYVVQ+VL++ + IC S+ G L++ K S V++ CL+
Sbjct: 187 IVEKSLELMQDAYGNYVVQYVLDVCGDDEVHAICESVIGRVCLLAIQKFSSNVMEKCLE- 245
Query: 343 RITVNYIVEEFL--LN-SDQIFRVACDKYGNYVIQTA-----------LIETMRPN 384
R T + + EE+L LN SD++ + D +GNYV+Q A L+ETM+P+
Sbjct: 246 RCT-DRVREEYLNELNDSDRLRELMMDPFGNYVVQRALSVSTHAQAIRLVETMKPH 300
>gi|26450884|dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thaliana]
gi|28950903|gb|AAO63375.1| At3g10360 [Arabidopsis thaliana]
Length = 330
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 153/316 (48%), Gaps = 24/316 (7%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL + + +F + + ++ + + +V KF E Q +
Sbjct: 2 DQYGSRFIQQKLKTATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELA 61
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM---TKPG 222
Q+T + S+ +G I+K ++ V L+ + +K L +M + G
Sbjct: 62 EQVTGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARMVKELDGSVMKCVHDQNG 113
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+E++ + FI + L L+ H GC + ++ + ++I+
Sbjct: 114 NHVIQKCIERL--PQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIME 171
Query: 283 -ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I + +L+++ GNYV+QH+++ P+ I L G + +S K S VV+ CL
Sbjct: 172 EIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLT 231
Query: 342 YR--ITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ +V E L +D+ + + D +GNYV+Q L ET SL L +++++
Sbjct: 232 FGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCDDQSLAL---ILSRI 287
Query: 397 QQNLDSL-RFGYGKHV 411
+ +L++L R+ YGKH+
Sbjct: 288 KVHLNALKRYTYGKHI 303
>gi|413924047|gb|AFW63979.1| hypothetical protein ZEAMMB73_492361 [Zea mays]
Length = 1002
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 156/325 (48%), Gaps = 20/325 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + +F + ++ + + +V KF E E
Sbjct: 674 VVEFSSDQYGSRFIQQKLETASTEQKNMIFPEILPQARTLMTDVFGNYVIQKFFEYGTET 733
Query: 160 QLLRITLQITSQDQLFV-QASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
Q T Q+ + + FV Q S+ +G I+K ++ V + ++ + R +
Sbjct: 734 Q----TKQLATLLKGFVLQLSLQMYGCRVIQKALEVVEVEQ-QTQMALELDGSIMRCVR- 787
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR-RK 277
+ G+ V+ +C+E I + FI A H + L+ H GC + ++ +
Sbjct: 788 DQNGNHVIQKCIECIPQERIR--FIISAFYGHVVELSMHPYGCRVIQRILEHCDDESTQN 845
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ I + +L+ + GNYV+QHVL+ P TI L G + +S K S VV+
Sbjct: 846 AMMEEIMQSVVTLTEDQYGNYVIQHVLQYGKPEERSTIIAQLAGQIVKMSQQKFASNVVE 905
Query: 338 NCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
CL + ++ E L +D+ + + D++ NYV+Q L ET + L +
Sbjct: 906 KCLTFGSPEQRQILINEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQNREL---I 961
Query: 393 VTKLQQNLDSL-RFGYGKHVYNFIK 416
+++++ +L++L R+ YGKH+ ++
Sbjct: 962 LSRIKVHLNALKRYTYGKHIVTRVE 986
>gi|356538984|ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1047
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 156/327 (47%), Gaps = 24/327 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + + ++ + + +V KF E
Sbjct: 716 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHSLALMTDVFGNYVVQKFFEHGLAS 775
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD ++ ++ L +M
Sbjct: 776 QRRELANKLLGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRC 827
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + FI + + L+ H GC + ++ K P
Sbjct: 828 VRDQNGNHVIQKCIECVPE--DAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTT 885
Query: 277 KQILYLISVNAAS-LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+Q + + A S L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 886 QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSCIIKELAGKIVQMSQQKFASNV 945
Query: 336 VQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 946 VEKCLTFGGPSERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 1002
Query: 391 RLVTKLQQNLDSL-RFGYGKHVYNFIK 416
++++++ +L++L ++ YGKH+ ++
Sbjct: 1003 -ILSRIKVHLNALKKYTYGKHIVTRVE 1028
>gi|403333004|gb|EJY65564.1| Pumilio domain-containing protein [Oxytricha trifallax]
Length = 1075
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 12/279 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
LA ++GS++LQ+++T +S + N +S ++ + Y + + +C+ +Q L
Sbjct: 705 LALTQKGSRFLQKQVTKANSGIVAYFLNEISPHLCDLMIDNYGNYFCQSLLSSCSGEQRL 764
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
I I + F++ D+ G+ +I+ + + V N P D + AL L G
Sbjct: 765 SILRAIQPK---FIEICCDRKGTHTIQTMFELV-NLPEEEDFIRDALMGNVIRLSKDPQG 820
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY- 281
+ VV + + H K FIY+ + + LA + G + + K + IL
Sbjct: 821 THVVQKVMASFPEH--KRAFIYEEVFDQFIELAKNNNGLCVVKKLVQFTKNTDQAVILMK 878
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
+ NA L ++ GNY V ++ +P + I LR LS K S V++ CL+
Sbjct: 879 RLQENAIDLVQDPFGNYAVTEIVVKWEPEVCRPIFEVLRSRISQLSSQKFSSNVIEKCLE 938
Query: 342 Y---RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ IVE L SD++ + ++YGNYV+Q AL
Sbjct: 939 RADEQMRAGLIVE--LAYSDRLTSLIRNQYGNYVVQKAL 975
>gi|300175939|emb|CBK21935.2| unnamed protein product [Blastocystis hominis]
Length = 544
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 133/279 (47%), Gaps = 13/279 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +A++ G + LQ+ L + + ++F + +++ + + +VF ++ C+E+
Sbjct: 224 VVDMAKNYNGCRALQQILLTASPAAVTEIFEELQSSLRELMTDPFGNYVFQMLLQVCSEE 283
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
+ +I +++ + AS++ G+ ++ L++ ++ P ++D + AL+ L
Sbjct: 284 RRAQI---LSAVRDFVIDASLNIHGTRCVQSLVQYCSS-PSMIDSLFAALQGHIAHLAAH 339
Query: 220 KPGSSVVLQCLEQIYHHNNKNDF---IYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
G+ V+L+CL+ I F +++ ++HC+ +A H GC + F R
Sbjct: 340 PNGNHVILRCLQSI-----PESFCTPLFEELVQHCIDIATHRHGCCVIQQFFLRAPPLYR 394
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+++ I A L N GNYVVQ VLE P E + S+ GH ++ S K S V+
Sbjct: 395 NRLMNAILHEAHLLITNPFGNYVVQFVLERGRPEERELLTRSVFGHVVEYSCQKYSSNVI 454
Query: 337 QNCLKYRIT-VNYIVEEFLLNSDQIFRVACDKYGNYVIQ 374
+ + V Y + ++ S + + NY+IQ
Sbjct: 455 EKVIVLADEQVRYQIICEIVGSPHFPAILHHNFANYIIQ 493
>gi|407035183|gb|EKE37585.1| pumilio family RNA-binding protein [Entamoeba nuttalli P19]
Length = 439
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 176/390 (45%), Gaps = 27/390 (6%)
Query: 35 NEIHPSPP-VP---LYPQSTWA---VPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGF 87
N ++ +PP +P + ++T A PS S+ +S P Y+ S++ + +
Sbjct: 59 NAVYNAPPFIPRRKISSKTTSANCISPSFYQMSSRVKQLVSSPPTYKKSNSTSINSHI-- 116
Query: 88 QANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARF 147
Q N + L +D+QGS+ +Q LT+ + ++F+ + ++++ + + +
Sbjct: 117 ---KIQQTNNYTVTDLCKDQQGSRRIQTFLTTAKDFEITELFDSIKGDLYELMNDLFGNY 173
Query: 148 VFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMK 207
V KFIE N D+L + I V+ S +G I+K+++ + +
Sbjct: 174 VVQKFIELGN-DKLRQFVHSIIRGK--VVELSKHMYGCRVIQKIIEYSNTNEN--ERIFN 228
Query: 208 ALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNF 267
+++ L+ + G+ V+ + +E + K Q +E + H GC M
Sbjct: 229 EIEKSIIELIEDQNGNHVIQKIIENYWGCIEKILSALQGQIEK---YSGHGFGCRVMQRI 285
Query: 268 IDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
I++ QI + N LS N GNYV+QH+LE + + E I + + S
Sbjct: 286 IEKRDNNFNNQIFQELQGNIIVLSMNQFGNYVIQHLLEFGNDTIREAIINEVEDVFFASS 345
Query: 328 LTKCGSFVVQNCLKYRITVN---YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPN 384
L K S V++ C+++ + I + F D I+++ D + NYV+Q TM N
Sbjct: 346 LLKFSSNVMEKCVQFGPSNKQQILIKKLFDCTDDMIYKMMKDPFANYVLQRMF--TMMNN 403
Query: 385 SLHLHQRLVTKLQQNLDSLRFG-YGKHVYN 413
L Q + +Q+N++SLR Y KH+ N
Sbjct: 404 DQRL-QFYTSYVQRNINSLRKNIYAKHLLN 432
>gi|228312515|pdb|3H3D|X Chain X, Drosophila Pumilio Rna Binding Domain (Puf Domain)
gi|228312516|pdb|3H3D|Y Chain Y, Drosophila Pumilio Rna Binding Domain (Puf Domain)
Length = 323
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 144/307 (46%), Gaps = 14/307 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 28 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 87
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 88 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 142
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 143 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 200
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 201 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 260
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 261 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 316
Query: 397 QQNLDSL 403
++N+ +L
Sbjct: 317 RKNMAAL 323
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIR-KLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSS 224
LQ+ V+ S D+ GS I+ KL +A A ++ + L + L MT +
Sbjct: 19 LQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMV--FSEILAAAYSL--MTDVFGN 74
Query: 225 VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
V+Q + KN Q H L LA GC + ++ + ++++I++ +
Sbjct: 75 YVIQKFFEFGTPEQKNTLGMQVK-GHVLQLALQMYGCRVIQKALESISPEQQQEIVHELD 133
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
+ ++ +GN+VVQ +E DP ++ I + +G LS G V+Q L++
Sbjct: 134 GHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT 193
Query: 345 T--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
I++E +++Q+ + D+YGNYVIQ L
Sbjct: 194 AEQTTPILDELHEHTEQLIQ---DQYGNYVIQHVL 225
>gi|384490402|gb|EIE81624.1| hypothetical protein RO3G_06329 [Rhizopus delemar RA 99-880]
Length = 492
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G+ V+ +CL + + + FIY A E+C+ +A H GC + ID + KQ++
Sbjct: 305 GNHVIQKCLHRFTTKHKQ--FIYDAVSENCIEVATHRHGCCVLQRCIDYSANNQTKQLVD 362
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I +A +L ++ GNYVVQ+VLEL D + G+ LS K S V++ C++
Sbjct: 363 EIINHALTLVQDPYGNYVVQYVLELGDAQFSNRLIRQFIGNLSKLSTQKYSSNVMEKCIR 422
Query: 342 Y--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
T + +V+E ++N D++ ++ D Y NYV+QTAL
Sbjct: 423 VAEEDTRHDLVQE-MMNKDRLEKLLKDSYANYVVQTAL 459
>gi|428162887|gb|EKX31992.1| hypothetical protein GUITHDRAFT_39628, partial [Guillardia theta
CCMP2712]
Length = 305
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 149/316 (47%), Gaps = 18/316 (5%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q KL +++ VF + + ++ + + +V KF+E D +
Sbjct: 1 DQHGSRFIQTKLDGANAQDRQLVFEALLPSSVGLMTDLFGNYVVQKFLE---RDLVKNGR 57
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSV 225
++T ++ S+D +G ++K ++ + P + +++ L+ + + G+ V
Sbjct: 58 NRLTCSIPQVLELSLDMYGCRVVQKAIEVIEG--PRQEQLVRELQGNVMKCVRDQNGNHV 115
Query: 226 VLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISV 285
+ +C+E+ + FI + + + LA H GC + ++ K + IL I
Sbjct: 116 IQKCIERSAPETVQ--FIVEDFIGQVVQLAMHPYGCRVIQRILEHCKHDQVAPILSEIVR 173
Query: 286 NAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT 345
+A L + GNYVVQHVLE E I G + +S K S VV+ L+ +
Sbjct: 174 SAKELVHDQYGNYVVQHVLEHGRGQDREAILQKCEGQIVAMSQHKFASNVVEKLLQ--VL 231
Query: 346 VNYIVEEFLLN----SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLD 401
+ I++E N + + + D YGNYV+Q AL + RL+ ++++L
Sbjct: 232 LVTILDEVTGNQPSGAPSVLDMMRDAYGNYVVQKALDVCEGVDR----ARLIAAIREHLP 287
Query: 402 SLR-FGYGKHVYNFIK 416
++R F YGKH+ I+
Sbjct: 288 AVRKFTYGKHIIAHIE 303
>gi|348675972|gb|EGZ15790.1| RNA-binding mating protein [Phytophthora sojae]
Length = 890
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 154/336 (45%), Gaps = 34/336 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ + A+D+ GS+++Q+KL D + F+ + + ++ + + +V KF+E + D
Sbjct: 551 LFIFAKDQTGSRFIQQKLEKADEHVKAEAFSEIYPNSLLLMTDVFGNYVIQKFLEYGSAD 610
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +TS + ++ +G I++ ++ L +++ LK ++
Sbjct: 611 QQHALVELMTSN---MISLALQVYGCRVIQRALEVTRVEEQL--ALIRQLKGHVMKCVVD 665
Query: 220 KPGSSVVLQCLE---------------QIYHHNNKNDFIYQAALEHCLYLACHEQGCINM 264
+ G+ V+ +C+E Q + FI + + H L+ H GC +
Sbjct: 666 QNGNHVLQKCIEAASWKRAAEYNGLGPQRFVTGEDIQFIIDSFIGHAAALSTHSYGCRVI 725
Query: 265 NNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYI 324
++ + + +L I L ++ GNYVVQHV+ +P + + ++
Sbjct: 726 QRVLEHCAPAQIRPLLNEIIYKCRDLVKDQFGNYVVQHVISHGEPDQRDIVMQAVLPEIA 785
Query: 325 DLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQ------IFRVACDKYGNYVIQTA 376
S K S VV++CL++ + ++ IV +F+L D+ + + YGNYV+Q
Sbjct: 786 RWSQHKYASNVVESCLEHATKGEISQIV-DFILQCDESGASCPLLPMMKHMYGNYVVQK- 843
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
L+E + H R+V ++ N D L RF +GKHV
Sbjct: 844 LLERADDHDRH---RIVCIIRHNEDYLKRFTFGKHV 876
>gi|222640878|gb|EEE69010.1| hypothetical protein OsJ_27957 [Oryza sativa Japonica Group]
Length = 1138
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 154/328 (46%), Gaps = 26/328 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + + VF+ V ++ + + +V KF E +
Sbjct: 814 IVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPE 873
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ + LD ++ ++ L +M
Sbjct: 874 QRRDLATKLVGH---VLPLSLQMYGCRVIQKALEVME-----LDQKIELVRELDGNIMRC 925
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + F+ A L+ H GC + ++ G +
Sbjct: 926 VRDQNGNHVIQKCIECV--PTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQ 983
Query: 277 KQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
Q I+ I +A L+++ GNYV QHVLE + I L G + +S K S V
Sbjct: 984 GQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNV 1043
Query: 336 VQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
++ C ++ + + IV++ N D + + D+Y NYV+Q ++ET L
Sbjct: 1044 IEKCFQHGDMTERDLLIREIVKQTEGN-DNLLAMMKDQYANYVVQ-KILETCNEQQREL- 1100
Query: 390 QRLVTKLQQNLDSLR-FGYGKHVYNFIK 416
L+++++ +L +LR + YGKH+ + ++
Sbjct: 1101 --LLSRVKGHLQALRKYTYGKHIVSRVE 1126
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ + + + +A+SL + GNYV+Q E P
Sbjct: 813 HIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTP 872
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ L GH + LSL G V+Q L+ + ++ +E I R D+ G
Sbjct: 873 EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEV-MELDQKIELVRELDGNIMRCVRDQNG 931
Query: 370 NYVIQTAL 377
N+VIQ +
Sbjct: 932 NHVIQKCI 939
>gi|42408517|dbj|BAD09696.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
[Oryza sativa Japonica Group]
gi|42409165|dbj|BAD10431.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
[Oryza sativa Japonica Group]
gi|215694322|dbj|BAG89315.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1006
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 154/328 (46%), Gaps = 26/328 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + + VF+ V ++ + + +V KF E +
Sbjct: 682 IVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPE 741
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ + LD ++ ++ L +M
Sbjct: 742 QRRDLATKLVGH---VLPLSLQMYGCRVIQKALEVME-----LDQKIELVRELDGNIMRC 793
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + F+ A L+ H GC + ++ G +
Sbjct: 794 VRDQNGNHVIQKCIECV--PTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQ 851
Query: 277 KQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
Q I+ I +A L+++ GNYV QHVLE + I L G + +S K S V
Sbjct: 852 GQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNV 911
Query: 336 VQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
++ C ++ + + IV++ N D + + D+Y NYV+Q ++ET L
Sbjct: 912 IEKCFQHGDMTERDLLIREIVKQTEGN-DNLLAMMKDQYANYVVQK-ILETCNEQQREL- 968
Query: 390 QRLVTKLQQNLDSLR-FGYGKHVYNFIK 416
L+++++ +L +LR + YGKH+ + ++
Sbjct: 969 --LLSRVKGHLQALRKYTYGKHIVSRVE 994
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ + + + +A+SL + GNYV+Q E P
Sbjct: 681 HIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTP 740
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ L GH + LSL G V+Q L+ + ++ +E I R D+ G
Sbjct: 741 EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEV-MELDQKIELVRELDGNIMRCVRDQNG 799
Query: 370 NYVIQTAL 377
N+VIQ +
Sbjct: 800 NHVIQKCI 807
>gi|449500099|ref|XP_004161004.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 150/322 (46%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL VF V ++I + + +V KF E +
Sbjct: 691 IVEFSVDQHGSRFIQQKLEHCSPEEKASVFKEVLPHASKLITDVFGNYVIQKFFEHGTHE 750
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ Q + S+ +G I+K ++ + LD ++ L +M
Sbjct: 751 QRKELADQLAGQ---ILPLSLQMYGCRVIQKALEVIE-----LDQKTHLVRELDGHVMRC 802
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + + DFI + L+ H GC + ++ +
Sbjct: 803 VRDQNGNHVIQKCIECVP--SEEIDFIISSFEGQVATLSTHPYGCRVIQRILEHCSDEAQ 860
Query: 277 KQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
Q I+ I + L+++ GNYV+QHVLE + I L G ++ +S K S V
Sbjct: 861 SQCIVDEILDSVYGLAQDQYGNYVIQHVLERGMHHERSQIISKLTGKFVRMSQHKYASNV 920
Query: 336 VQNCLKYRITVNYIVEEFLL-----NSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL++ T+ + + +D + + D++ NYV+Q +IE + +
Sbjct: 921 VEKCLEHGDTIERELIIEEIMGQSEENDTLLAMMKDQFANYVVQK-IIEICNDDQ---RE 976
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
RL+ +++ +L +L ++ YGKH+
Sbjct: 977 RLLNRIKGHLQALKKYTYGKHI 998
>gi|449453445|ref|XP_004144468.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 150/322 (46%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL VF V ++I + + +V KF E +
Sbjct: 691 IVEFSVDQHGSRFIQQKLEHCSPEEKASVFKEVLPHASKLITDVFGNYVIQKFFEHGTHE 750
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ Q + S+ +G I+K ++ + LD ++ L +M
Sbjct: 751 QRKELADQLAGQ---ILPLSLQMYGCRVIQKALEVIE-----LDQKTHLVRELDGHVMRC 802
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + + DFI + L+ H GC + ++ +
Sbjct: 803 VRDQNGNHVIQKCIECVP--SEEIDFIISSFEGQVATLSTHPYGCRVIQRILEHCSDEAQ 860
Query: 277 KQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
Q I+ I + L+++ GNYV+QHVLE + I L G ++ +S K S V
Sbjct: 861 SQCIVDEILDSVYGLAQDQYGNYVIQHVLERGMHHERSQIISKLTGKFVRMSQHKYASNV 920
Query: 336 VQNCLKYRITVNYIVEEFLL-----NSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL++ T+ + + +D + + D++ NYV+Q +IE + +
Sbjct: 921 VEKCLEHGDTIERELIIEEIMGQSEENDTLLAMMKDQFANYVVQK-IIEICNDDQ---RE 976
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
RL+ +++ +L +L ++ YGKH+
Sbjct: 977 RLLNRIKGHLQALKKYTYGKHI 998
>gi|158828234|gb|ABW81111.1| putative pumilio Mpt5 [Boechera divaricarpa]
Length = 975
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 152/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 642 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPP 701
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD +K +K L +M
Sbjct: 702 QRRELADKLLDN---VLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 753
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR- 275
+ G+ VV +C+E + N +FI + + L+ H GC + ++ P
Sbjct: 754 VRDQNGNHVVQKCIECVPEENI--EFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDT 811
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + L+++ GNYV+QHVLE P I L G + +S K S V
Sbjct: 812 QSKVMEEIMSTVSMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 871
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 872 VEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 928
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 929 -ILTRIKVHLNALKKYTYGKHI 949
>gi|115477332|ref|NP_001062262.1| Os08g0519800 [Oryza sativa Japonica Group]
gi|113624231|dbj|BAF24176.1| Os08g0519800 [Oryza sativa Japonica Group]
Length = 1001
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 154/328 (46%), Gaps = 26/328 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + + VF+ V ++ + + +V KF E +
Sbjct: 677 IVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPE 736
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ + LD ++ ++ L +M
Sbjct: 737 QRRDLATKLVGH---VLPLSLQMYGCRVIQKALEVME-----LDQKIELVRELDGNIMRC 788
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + F+ A L+ H GC + ++ G +
Sbjct: 789 VRDQNGNHVIQKCIECV--PTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQ 846
Query: 277 KQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
Q I+ I +A L+++ GNYV QHVLE + I L G + +S K S V
Sbjct: 847 GQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNV 906
Query: 336 VQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
++ C ++ + + IV++ N D + + D+Y NYV+Q ++ET L
Sbjct: 907 IEKCFQHGDMTERDLLIREIVKQTEGN-DNLLAMMKDQYANYVVQ-KILETCNEQQREL- 963
Query: 390 QRLVTKLQQNLDSLR-FGYGKHVYNFIK 416
L+++++ +L +LR + YGKH+ + ++
Sbjct: 964 --LLSRVKGHLQALRKYTYGKHIVSRVE 989
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ + + + +A+SL + GNYV+Q E P
Sbjct: 676 HIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTP 735
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ L GH + LSL G V+Q L+ + ++ +E I R D+ G
Sbjct: 736 EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEV-MELDQKIELVRELDGNIMRCVRDQNG 794
Query: 370 NYVIQTAL 377
N+VIQ +
Sbjct: 795 NHVIQKCI 802
>gi|328866169|gb|EGG14555.1| RNA binding protein [Dictyostelium fasciculatum]
Length = 652
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 152/330 (46%), Gaps = 29/330 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I ++D+ GS+ +Q+K+ + ++ VF+ V ++ + + +V KF E + D
Sbjct: 332 IAEFSKDQVGSRIIQQKIENANAEDKQLVFDEVIVAVHSLMTDVFGNYVLQKFFEHGSSD 391
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD---LVMKALKRLFRLL 216
Q RI + + L + ++ +G I+K ++++ LD ++++ L
Sbjct: 392 QK-RILAEKLKGNILLL--ALQMYGCRVIQKAIESIE-----LDQQIMLIQELDGHIVQC 443
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ + G+ V+ +C+E+I N FI + H +LA H GC + ++ +
Sbjct: 444 VTDQNGNHVIQKCIEKI--PTNLIQFIIDSFNGHIYHLATHPYGCRVIQRILEHCSEQQV 501
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL + A SL ++ GNYV+QHVLE I L LS K S V+
Sbjct: 502 APILEELMRCAVSLVQDQYGNYVIQHVLEHGTQSDKSAIVQKLHNQVYQLSQHKFASNVI 561
Query: 337 QNCLKYRITVN--YIVEEFL-----LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
+ C++Y T I+ E L S + +V D Y NYVIQ L + +
Sbjct: 562 EKCVQYGSTAERAMIINEILGDQSGTTSSAMLKVLKDPYANYVIQKIL------DIVDQS 615
Query: 390 QR--LVTKLQQNLDSLR-FGYGKHVYNFIK 416
QR ++ ++Q + +LR YGKH+ + I+
Sbjct: 616 QREMIIQRIQPYIATLRKVTYGKHIISRIE 645
>gi|146412760|ref|XP_001482351.1| hypothetical protein PGUG_05371 [Meyerozyma guilliermondii ATCC
6260]
Length = 761
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 156/341 (45%), Gaps = 48/341 (14%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ-- 160
+D+ GS+++Q+KL + + + +FN + E +++++ + + +V K+ E N Q
Sbjct: 426 FTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKYFEYGNNTQKQ 485
Query: 161 -LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
LL+ + + S+ +G +++ ++AV + +L ++ L+ +
Sbjct: 486 VLLKFMIG------HIYELSLQMYGCRVVQRALEAVDLKGQIL--IIDELRDHILVCAKD 537
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ- 278
+ G+ V+ + +E+I ++ FI + + +L+ H GC + + E P+R+Q
Sbjct: 538 QNGNHVIQKSIEKIPF--SEITFIMDSLEDQIYHLSTHPYGCRVIQRLL-EYADPKRQQE 594
Query: 279 --------ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
I YLI ++ GNYV+QH+LE E I + G ++ S K
Sbjct: 595 MLDELNRFIFYLI--------QDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSKHK 646
Query: 331 CGSFVVQNCLKYRIT--VNYIVEEFLL-NSDQIFRVACDK----------YGNYVIQTAL 377
S V++ C+K+ I++E +L N D D+ Y NYVIQ L
Sbjct: 647 FASNVIEKCIKFGTVKQKRRILDEVMLGNEDPTVETVSDESPLALMMKDQYANYVIQK-L 705
Query: 378 IETMRPNSLHLHQRLVTKLQQNLD--SLRFGYGKHVYNFIK 416
+E + LV KL+Q L S + YGKH+ + K
Sbjct: 706 VEGFDAKG-EEKRMLVMKLRQYLKQISSKNTYGKHLASVEK 745
>gi|384245702|gb|EIE19195.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 945
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 145/319 (45%), Gaps = 44/319 (13%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVV---SEFTFQIICNQYARFVFGKFIETCNED 159
L +D+ GS+++Q K+ + + F V + Q++ + + +V KF++ ++D
Sbjct: 488 LCRDQFGSRFIQMKIETASPEEVAAAFTEVCVNKDPALQLMNDVFGNYVVQKFLDFGDDD 547
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + I + S+ +G I+K ++ + RPPL D ++ LK +
Sbjct: 548 QKEVMAALIQGHVKTL---SLQVYGCRVIQKAIEVL--RPPLKDSIVAELKGHVIECISD 602
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQ--------AALEHC---------------LYLAC 256
+ G+ V+ +C+E I D + + AA + + LA
Sbjct: 603 QNGNHVIQKCIECITPSEPIADLLEELADGPEGAAAAQRSRAPLPPGKPALSAGFVPLAR 662
Query: 257 HEQGCINMNNFIDEMK-GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETI 315
H GC + +++ + +++ ++ NA L+R+ GNYV+QH L P I
Sbjct: 663 HPYGCRVVQRILEKCTLEDYKHRLVATVTENALDLARDTYGNYVIQHSLAFGSPEEKVEI 722
Query: 316 CFSLRGHYIDLSLTKCGSFVVQNCLKY-------RITVNYIVEEFLLNS---DQIFRVAC 365
L+ H ++LS K S VV+ CL++ R+ + E L+S DQ+ +
Sbjct: 723 IQRLQAHIVELSTHKFASNVVEKCLEFGTRDQRRRLVSTMLGEGSGLDSAGADQLLQTMT 782
Query: 366 -DKYGNYVIQTALIETMRP 383
D+YGNYV+Q L E+++P
Sbjct: 783 KDQYGNYVVQKTL-ESIKP 800
>gi|303391583|ref|XP_003074021.1| Puf RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
gi|303303170|gb|ADM12661.1| Puf RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
Length = 528
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 135/283 (47%), Gaps = 28/283 (9%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+++D++GS+ +Q K+ S + FN + E ++ N + +V K I E +
Sbjct: 223 VSKDQEGSRCIQRKMDSISREEISWFFNNIVEAASELSANLFGNYVVQKIIPLLTEGERT 282
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+ ++ Q L SV +G ++KL+ ++ +D +++ +K L+ + G
Sbjct: 283 ILITKLVGQIHLL---SVHPYGCRVVQKLVDVSSD----VDFILEEVKGNLLELIEDQNG 335
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+E+ I Q E+ L+LA H+ GC + ++ K K I+ +
Sbjct: 336 NHVIQKCIEKCKDRK----IILQQFSENSLFLATHKYGCRVIQRMLEFCKKDEIKGIVEV 391
Query: 283 ISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ N +L + GNYV+QH+L E E +IE I + Y +LS K S VV+
Sbjct: 392 LIGNIKTLVDDQYGNYVIQHILAVGKEEERNLVIERI---IEKSY-ELSKCKFSSNVVEQ 447
Query: 339 CLKYRITVNYIVEEFLL-------NSDQIFRVACDKYGNYVIQ 374
C+K ++ N E+FL ++ + D YGNYV+Q
Sbjct: 448 CVK--LSNNGQREQFLEKFLEPVGGKPGMYSMCTDMYGNYVVQ 488
>gi|357445829|ref|XP_003593192.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482240|gb|AES63443.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 198
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
Query: 242 FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQ 301
FI+ AA HC+ +A H+ GC + I G R++++ IS NA L+++ GNYVVQ
Sbjct: 23 FIFVAAARHCIDIATHQHGCCVLPKCIRYSSGEHRQRLVAEISANALLLAQDKYGNYVVQ 82
Query: 302 HVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNY--IVEEFLLNSDQ 359
+VL+ P T+ G+Y+ +S+ K S VV+ CL N I+ E L SD
Sbjct: 83 YVLDFRIPSAATTLTRQFEGNYVHMSMQKFSSRVVEKCLVVFNDENRAKIIHELL--SDP 140
Query: 360 IFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
F + D + NYVIQ AL R + H++ LV K++
Sbjct: 141 HFDLLLQDPHANYVIQKAL----RHSEGHVYNLLVEKIE 175
>gi|125562207|gb|EAZ07655.1| hypothetical protein OsI_29908 [Oryza sativa Indica Group]
Length = 1806
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 151/323 (46%), Gaps = 26/323 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + + VF+ V ++ + + +V KF E +
Sbjct: 1475 IVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPE 1534
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ + LD ++ ++ L +M
Sbjct: 1535 QRRDLATKLVGH---VLPLSLQMYGCRVIQKALEVME-----LDQKIELVRELDGNIMRC 1586
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + F+ A L+ H GC + ++ G +
Sbjct: 1587 VRDQNGNHVIQKCIECV--PTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQ 1644
Query: 277 KQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
Q I+ I +A L+++ GNYV QHVLE + I L G + +S K S V
Sbjct: 1645 GQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNV 1704
Query: 336 VQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
++ C ++ + + IV++ N D + + D+Y NYV+Q ++ET L
Sbjct: 1705 IEKCFQHGDMTERDLLIREIVKQTEGN-DNLLAMMKDQYANYVVQK-ILETCNEQQREL- 1761
Query: 390 QRLVTKLQQNLDSLR-FGYGKHV 411
L+++++ +L +LR + YGKH+
Sbjct: 1762 --LLSRVKGHLQALRKYTYGKHI 1782
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ + + + +A+SL + GNYV+Q E P
Sbjct: 1474 HIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTP 1533
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ L GH + LSL G V+Q L+ + ++ +E I R D+ G
Sbjct: 1534 EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEV-MELDQKIELVRELDGNIMRCVRDQNG 1592
Query: 370 NYVIQTAL 377
N+VIQ +
Sbjct: 1593 NHVIQKCI 1600
>gi|67484574|ref|XP_657507.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56474760|gb|EAL52117.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449702146|gb|EMD42840.1| pumilio family RNA-binding protein, putative [Entamoeba histolytica
KU27]
Length = 439
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 179/390 (45%), Gaps = 27/390 (6%)
Query: 35 NEIHPSPP-VP---LYPQSTWA---VPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGF 87
N ++ +PP +P + ++T A PS S+ +S P Y+ S++ + +
Sbjct: 59 NAVYNAPPFIPRRKISSKTTSANCISPSFYQMSSRVKQLVSSPPTYKKSNSTSINSHI-- 116
Query: 88 QANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARF 147
Q N + L +D+QGS+ +Q LT+ + ++F+ + ++++ + + +
Sbjct: 117 ---KIQQTNNYTVTDLCKDQQGSRRIQTFLTTAKDFEITELFDSIKGDLYELMNDLFGNY 173
Query: 148 VFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMK 207
V KFIE N D+L + I V+ S +G I+K+++ + +
Sbjct: 174 VVQKFIELGN-DKLRQFVHSIIRGK--VVELSKHIYGCRVIQKIIEYSNTNEN--ERIFN 228
Query: 208 ALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNF 267
+++ L+ + G+ V+ + +E + K Q +E + H GC +
Sbjct: 229 EIEKSIIELIEDQNGNHVIQKIIENYWGCIEKILSALQGQIEK---YSGHGFGCRVVQRI 285
Query: 268 IDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
I++ QI + N LS N GNYV+QH+LE + + E I + + + S
Sbjct: 286 IEKRDNNFNYQIFQELQGNIIVLSLNQFGNYVIQHLLEFGNDTIREAIINEVENVFFESS 345
Query: 328 LTKCGSFVVQNCLKYRITVN---YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPN 384
L K S V++ C+++ + I + F + D+I+++ D + NYV+Q TM N
Sbjct: 346 LLKFSSNVMEKCVQFGPSNKQQLLIKKLFDCDDDKIYKMMKDPFANYVLQRMF--TMMNN 403
Query: 385 SLHLHQRLVTKLQQNLDSLRFG-YGKHVYN 413
L Q + +Q+N++SLR Y KH+ N
Sbjct: 404 DQRL-QFYTSYVQRNINSLRKNIYAKHLLN 432
>gi|407928197|gb|EKG21067.1| hypothetical protein MPH_01611 [Macrophomina phaseolina MS6]
Length = 943
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 135/291 (46%), Gaps = 20/291 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I + D+ GS+++Q+KL + +S ++VF + Q++ + + +V KF E ++
Sbjct: 548 ICEFSGDQHGSRFIQQKLETANSDEKERVFKEIQPNAMQLMTDVFGNYVIQKFFEHGDQS 607
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G ++K ++ V L+D +K L ++
Sbjct: 608 QKRILANKMKGH---VLTLSLQMYGCRVVQKALEHV-----LVDQQADMVKELENNVLRC 659
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A + H L+ H GC + ++ + P R
Sbjct: 660 VKDQNGNHVIQKAIERVPAQHIQ--FIIDAFIGHVSSLSVHGYGCRVIQRMLEHCEEPAR 717
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + A +L + GNYV QH++E P I ++ + + K S VV
Sbjct: 718 RAILSELHACAPTLIPDQYGNYVTQHIIEHGAPDDRAAIIEIVKTQLLAFAKHKFASNVV 777
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETM 381
+ CL + R + I E+ + + D YGNYVIQ L++T+
Sbjct: 778 EKCLVFGSDDERREIMLKICEKTERGESTLVMLIKDGYGNYVIQK-LLDTL 827
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 230 LEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAAS 289
LE+ H++ + + ++ + + G + ++ ++++ I NA
Sbjct: 527 LEEFKHNSRSKRYELKDIYDYICEFSGDQHGSRFIQQKLETANSDEKERVFKEIQPNAMQ 586
Query: 290 LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYI 349
L + GNYV+Q E D + ++GH + LSL G VVQ L++ + V+
Sbjct: 587 LMTDVFGNYVIQKFFEHGDQSQKRILANKMKGHVLTLSLQMYGCRVVQKALEH-VLVDQQ 645
Query: 350 VEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ + + R D+ GN+VIQ A+
Sbjct: 646 ADMVKELENNVLRCVKDQNGNHVIQKAI 673
>gi|403332189|gb|EJY65091.1| mRNA binding protein Pumilio 2 [Oxytricha trifallax]
gi|403345849|gb|EJY72304.1| mRNA binding protein Pumilio 2 [Oxytricha trifallax]
Length = 1648
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ L+ ++ GS++LQ L + + + + + + + ++ + Y + + + C+
Sbjct: 1014 VIKLSINQTGSKFLQRLLDNANPQIVQFLLDEIQSHLPMVMVDNYGNYFCQELLINCSSA 1073
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++I +I+ FV +K G+ +I+K + V N + L LL
Sbjct: 1074 QRMQILERISVD---FVAICCNKKGTHTIQKFIDLV-NLEAEEKFFQRVLAGHVALLSSD 1129
Query: 220 KPGSSVV---LQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR- 275
G+ V+ ++C E+ +K F++ E + LA G + I + P
Sbjct: 1130 VQGTHVIQNIIKCFEE-----SKRQFVFDEIYEQFIELATDYSGLSVIKTIISKTHKPEN 1184
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
RK+++ + NA L++N GNY +Q E D L + I G LSL KC S V
Sbjct: 1185 RKRLMGKLVANAIELAQNPYGNYAIQQSFEHWDKELCQDIIPQFFGKVYQLSLQKCSSNV 1244
Query: 336 VQNCLK-YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ C++ + I+ + L+N +++ + + YGN+V+Q AL
Sbjct: 1245 IDKCIQNSKPEYLAIIMQELINCERLNNLITNSYGNFVVQNAL 1287
>gi|168030336|ref|XP_001767679.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680999|gb|EDQ67430.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1134
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 152/325 (46%), Gaps = 30/325 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + F + ++ + + +V KF E +
Sbjct: 802 VVEFSADQHGSRFIQQKLETATPEDKNMGFQEIVPRAITLMSDVFGNYVIQKFFEHGTQQ 861
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S+ +G I+K ++ V +D + + L +M
Sbjct: 862 QRRELASQLVGHVLVL---SLQMYGCRVIQKALEVVD-----VDQQTQLVSELDGHVMRC 913
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI----DEMK 272
+ G+ V+ +C+E + K FI A + L+ H GC + + DE K
Sbjct: 914 VRDQNGNHVIQKCIECV--PPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQK 971
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+K I+ I + +L+++ GNYVVQHVLE + I L G + +S K
Sbjct: 972 ---QKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDHERSDIITKLAGQIVQMSQHKFA 1028
Query: 333 SFVVQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL+Y +V+E L ++D+ + + D++ NYV+Q L ET +
Sbjct: 1029 SNVVEKCLEYGGPAERQILVDEMLGHTDENEPLQAMMKDQFANYVVQKVL-ETCDESQRE 1087
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHV 411
L L+ +++ +L +L ++ YGKH+
Sbjct: 1088 L---LLGRIRVHLHALKKYTYGKHI 1109
>gi|147775244|emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
Length = 1039
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 154/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 709 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGNYVIQKFFEHGLVS 768
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V D +K ++ L +M
Sbjct: 769 QRRELAGKLYGH---VLTLSLQMYGCRVIQKAIEVVDP-----DQKIKMVEELDGHIMRC 820
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR- 275
+ G+ V+ +C+E + + FI + + L+ H GC + ++ + P+
Sbjct: 821 VRDQNGNHVIQKCIECV--PEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCRDPKT 878
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 879 QSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASNV 938
Query: 336 VQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 939 VEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 995
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++++++ +L++L ++ YGKH+
Sbjct: 996 -ILSRIKVHLNALKKYTYGKHI 1016
>gi|8071634|gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 [Populus tremula x Populus
tremuloides]
Length = 966
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 136/287 (47%), Gaps = 19/287 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + + + VF V +++ + + +V KF E + +
Sbjct: 669 IVEFSVDQHGSRFIQQKLENCNVEEKESVFKEVLPHAPKLMTDVFGNYVIQKFFEHGSPE 728
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + + +++ Q +Q S+ +G I+K ++ + LD K + L +M
Sbjct: 729 QRIELAEKLSGQ---ILQLSLQMYGCRVIQKALEVIE-----LDQKAKLAQELDGHVMRC 780
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + +FI A + L+ H GC + ++ +
Sbjct: 781 VHDQNGNHVIQKCIECVPAEHI--EFIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQ 838
Query: 277 KQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
Q I+ I ++ L+++ GNYV QHVLE P+ I L G + +S K S V
Sbjct: 839 SQCIVDEILESSYLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMSQHKYASNV 898
Query: 336 VQNCLKYRITVNY--IVEEFLLNS---DQIFRVACDKYGNYVIQTAL 377
V+ CLK+ ++ E + S D + + D++ NYV+Q L
Sbjct: 899 VEKCLKHADATERELMIGEIIGQSEDNDNLLIMMKDQFANYVVQKIL 945
>gi|224100489|ref|XP_002311896.1| predicted protein [Populus trichocarpa]
gi|222851716|gb|EEE89263.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 154/316 (48%), Gaps = 24/316 (7%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL + + + VF V +++ + + +V KF E + +Q + +
Sbjct: 21 DQHGSRFIQQKLENCNVEEKESVFKEVLPHAPKLMTDVFGNYVIQKFFEHGSPEQRMELA 80
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM---TKPG 222
+++ Q +Q S+ +G I+K ++ + LD K + L +M + G
Sbjct: 81 EKLSGQ---ILQLSLQMYGCRVIQKALEVIE-----LDQKAKLAQELDGHVMRCVHDQNG 132
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ-ILY 281
+ V+ +C+E + + +FI A + L+ H GC + ++ + Q I+
Sbjct: 133 NHVIQKCIECVPAEHI--EFIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQSQCIVD 190
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I ++ L+++ GNYV QHVLE P+ I L G + +S K S VV+ CLK
Sbjct: 191 EILESSYLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMSQHKYASNVVEKCLK 250
Query: 342 YRITV--NYIVEEFLLNS---DQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ ++ E + S D + + D++ NYV+Q ++ET + L++++
Sbjct: 251 HADAAERELMIGEIIGQSEENDNLLIMMKDQFANYVVQK-ILETSNDKQKEI---LLSRI 306
Query: 397 QQNLDSL-RFGYGKHV 411
+L++L ++ YGKH+
Sbjct: 307 NAHLNALKKYTYGKHI 322
>gi|344232856|gb|EGV64729.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 782
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 188/414 (45%), Gaps = 50/414 (12%)
Query: 39 PSPP-VPLYPQ----STWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQ 93
PSPP +P +P+ ST P + R+ P +G N + S++ Q+P +++ +
Sbjct: 368 PSPPLMPAHPEVAEESTSQKPEPAARNPTPPANG--NRKRNAKVSNSKQSPHIYRSPLLE 425
Query: 94 HCANSG-------------ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQII 140
++ + +D+ GS+++Q+KL + +FN + +++++
Sbjct: 426 EVRSNAKGKEYFLKDIYGHAVEFTKDQHGSRFIQQKLPHSSEEEKEVIFNEIRVISYELM 485
Query: 141 CNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPP 200
+ + +V K+ E + + + + + S + S+ +G +++ ++A+
Sbjct: 486 TDVFGNYVIQKYFEHGS---MTQKKILLESMLGHIYELSLQMYGCRVVQRALEALE---- 538
Query: 201 LLDLVMKALKRLFRLLMM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACH 257
LD +K + L +++ + G+ V+ + +E+I N + FI +A +L+ H
Sbjct: 539 -LDGQIKIITELKNHILICAKDQNGNHVIQKSIERIPFENVR--FILEALESQVYHLSTH 595
Query: 258 EQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICF 317
GC + ++ + +IL ++ L ++ GNYV+QH+LE + E I
Sbjct: 596 PYGCRVIQRLLEHSDVADQDKILAELNRFIFYLIQDQYGNYVMQHILERGNMVDREAILK 655
Query: 318 SLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQ-----------IFRVA 364
+ G ++ S K S V++ C+K+ I+ E LL ++ + +
Sbjct: 656 VVLGSVVNFSKHKFASNVIEKCIKFGTFEQRKKILHEVLLGNEDLSIEDVEDDSPLALMM 715
Query: 365 CDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLD--SLRFGYGKHVYNFIK 416
D+Y NYVIQ L+E S + LV KL+Q L S + YGKH+ + K
Sbjct: 716 KDQYANYVIQK-LVEGFSSKSQE-KRLLVLKLRQYLKQISSKNNYGKHLASVEK 767
>gi|357445491|ref|XP_003593023.1| Pumilio homology domain family member [Medicago truncatula]
gi|355482071|gb|AES63274.1| Pumilio homology domain family member [Medicago truncatula]
Length = 454
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 147/325 (45%), Gaps = 28/325 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE----- 154
++ +A + + QYLQ + G+ ++ + V ++ +++ +++ ++ K +
Sbjct: 109 VVSMAMNHRECQYLQAVIDEGNPVYVTMILLEVKDYLHELMTHRFGSYLIQKIFQARRGM 168
Query: 155 TCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD-LVMKALKRLF 213
TC + L I S + +D G+ +++ ++ V R P +V+ L+ +
Sbjct: 169 TCQQMDL--TVFLIISNHRKLKDVCMDHHGTRAMQTMIANV--RHPFTGYVVVYMLQHIT 224
Query: 214 RLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
LM GS V++QC++ + I +C+ +A + GC + +D G
Sbjct: 225 IPLMKNVNGSYVIVQCVK--FFPPKHKKIILDEVARNCVDIATDKIGCSAVKKCLD--YG 280
Query: 274 PRRKQILYLIS---VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
R I L++ NA LS + GNYVVQ V++++ P E + LR + LS+ K
Sbjct: 281 GRTSAIDILVAQIISNAMILSEDPYGNYVVQRVIQMKIPLANEQMVQELRSKFDRLSVNK 340
Query: 331 CGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHL 388
S VV+ L + + V I EE ++ S V D YGNYV Q AL R H+
Sbjct: 341 YASNVVEYLLSFSNQDAVKVIAEE-IMRSRNFLNVLHDPYGNYVAQRAL----RCTKGHV 395
Query: 389 HQRLVTKLQQNLDSLRFGYGKHVYN 413
+R + ++ S R H+Y
Sbjct: 396 RRRFSSLIK----SHRLALQSHIYG 416
>gi|349916591|dbj|GAA27968.1| pumilio homolog 1 [Clonorchis sinensis]
Length = 1618
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 159/357 (44%), Gaps = 54/357 (15%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ AQD+ GS+++Q+KL + VF + + ++ + + +V KF E +
Sbjct: 1029 IVEFAQDQYGSRFIQQKLEQASAVDKTAVFREILPHAYSLMVDVFGNYVIQKFFELGTPE 1088
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + +I Q + S+ +G I+K +++V LD+ + ++ L ++
Sbjct: 1089 QKQILGQRIRGQ---VLTLSLQMYGCRVIQKAVESVP-----LDMQVAIIRELDGCVIKC 1140
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ VV +C+E + + + FI + + ++ H GC + ++ +
Sbjct: 1141 VKDQNGNHVVQKCIESVPPEHLQ--FIVDSFTNNVQSISTHSYGCRVIQRILEHCTPEQT 1198
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL + + SL ++ GNYV+QHVLE I ++G +LS+ K S VV
Sbjct: 1199 APILAELHQHTESLVKDQYGNYVIQHVLEHGKTEDKSRIVDLIKGRVAELSVHKFASNVV 1258
Query: 337 QNCL------KYRITVNYIVE--------------EFLL----------------NSDQI 360
+ + + +N ++E +FL N+ +
Sbjct: 1259 EKAVANATRAERHSLINEVLESNYPTDPNDRPRSGDFLALSGSSDGGGSADEPHGNTSIL 1318
Query: 361 FRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHVYNFIK 416
+ D+Y NYV+Q L +P + + L+ +++ +L+SLR + YGKH+ N ++
Sbjct: 1319 CMMMKDQYANYVVQKMLDVAEQP----IRKELMNQIRPHLNSLRKYTYGKHIINKME 1371
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + A + G + +++ + + I +A SL + GNYV+Q EL P
Sbjct: 1028 HIVEFAQDQYGSRFIQQKLEQASAVDKTAVFREILPHAYSLMVDVFGNYVIQKFFELGTP 1087
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ + +RG + LSL G V+Q ++ + ++ V + + D+ G
Sbjct: 1088 EQKQILGQRIRGQVLTLSLQMYGCRVIQKAVE-SVPLDMQVAIIRELDGCVIKCVKDQNG 1146
Query: 370 NYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHVYNFI 415
N+V+Q IE++ P L Q +V N+ S+ YG V I
Sbjct: 1147 NHVVQKC-IESVPPEHL---QFIVDSFTNNVQSISTHSYGCRVIQRI 1189
>gi|303280035|ref|XP_003059310.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459146|gb|EEH56442.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 429
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 157/324 (48%), Gaps = 23/324 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + VF+ V ++ + + +V KF+ +
Sbjct: 25 VVEFSSDQHGSRFIQQKLETAAPEDAQLVFDEVLPAAHALMTDVFGNYVVQKFLANGTPE 84
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q+ I ++ + S+ +G I+K ++ V + LV + + R +
Sbjct: 85 QIDAIAGELKGH---VLSLSLQMYGCRVIQKALE-VIDEDAQCALVAELEGHVSRCV-RD 139
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMN----NFIDEMKGPR 275
+ G+ VV +C+E + K FI +A + L L+ H GC + +++ E P
Sbjct: 140 QNGNHVVQKCIECVA--PAKIQFIVEAFYGNVLSLSTHPYGCRVIQARSIHWVLEHCTPE 197
Query: 276 RKQ--ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+K I+ I A SL+++ GNYVVQHVL+ +TI +L G + L+ K S
Sbjct: 198 QKSEGIMDEILREATSLAQDQYGNYVVQHVLQHGGEGERKTILQTLAGQIVLLAQHKFAS 257
Query: 334 FVVQNCLKY--RITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHL 388
V++ CL Y +++E L +D+ + + D++ NYV+Q L+E
Sbjct: 258 NVIEKCLTYCGASERQIMIDEMLGKTDENEPLQAMMKDQFANYVVQK-LLEVCDDGQ--- 313
Query: 389 HQRLVTKLQQNLDSL-RFGYGKHV 411
+L+T+++ +L +L +F YGKH+
Sbjct: 314 RDQLLTRMRVHLGNLKKFTYGKHI 337
>gi|225434877|ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1065
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 154/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 735 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGNYVIQKFFEHGLVS 794
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V D +K ++ L +M
Sbjct: 795 QRRELAGKLYGH---VLTLSLQMYGCRVIQKAIEVVDP-----DQKIKMVEELDGHIMRC 846
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR- 275
+ G+ V+ +C+E + + FI + + L+ H GC + ++ + P+
Sbjct: 847 VRDQNGNHVIQKCIECVPE--DAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCRDPKT 904
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 905 QSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASNV 964
Query: 336 VQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 965 VEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 1021
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++++++ +L++L ++ YGKH+
Sbjct: 1022 -ILSRIKVHLNALKKYTYGKHI 1042
>gi|66814744|ref|XP_641551.1| RNA binding protein [Dictyostelium discoideum AX4]
gi|60469557|gb|EAL67547.1| RNA binding protein [Dictyostelium discoideum AX4]
Length = 785
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 154/335 (45%), Gaps = 26/335 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I ++D+ GS+ +Q+K+ + VF+ V ++ + + +V KF E +
Sbjct: 464 IAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKFFEHGTTE 523
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD---LVMKALKRLFRLL 216
Q + +++ + ++ +G I+K ++++ LD L++ L
Sbjct: 524 QKRILADKLSGH---ILSLTLQMYGCRVIQKAIESIE-----LDKQILLIGELNGHIVQC 575
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ + G+ V+ +C+E+I H + FI + H LA H GC + ++ +
Sbjct: 576 VTDQNGNHVIQKCIEKIPTHLIQ--FIIDSFHGHIYQLATHPYGCRVIQRILEHCAEKQV 633
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL + A SL ++ GNYV+QHVLE P I L+G +LS K S V+
Sbjct: 634 APILDELMRCAVSLVQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLSQHKFASNVI 693
Query: 337 QNCLKYRITVN--YIVEEFLLN------SDQIFRVACDKYGNYVIQTALIETMRPNSLHL 388
+ C+++ T I+ E L + S+ + ++ D Y NYVIQ +++ + P +
Sbjct: 694 EKCVQHGCTAERILIINEILGDANSPNSSNVLLKILKDPYANYVIQ-KILDIVEPAQRDM 752
Query: 389 HQRLVTKLQQNLDSL-RFGYGKHVYNFIKDCDLQN 422
++ ++Q + +L + GKH+ + I+ N
Sbjct: 753 ---IINRIQPFVPTLKKVTPGKHIISRIEKYSANN 784
>gi|5106561|gb|AAD39751.1|AF128626_1 RNA binding protein PufA [Dictyostelium discoideum]
Length = 795
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 153/335 (45%), Gaps = 26/335 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I ++D+ GS+ +Q+K+ + VF+ V ++ + + +V KF E +
Sbjct: 474 IAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKFFEHGTTE 533
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD---LVMKALKRLFRLL 216
Q + +++ + ++ +G I+K ++++ LD L++ L
Sbjct: 534 QKRILADKLSGH---ILSLTLQMYGCRVIQKAIESIE-----LDKQILLIGELNGHIVQC 585
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ + G+ V+ +C+E+I H FI + H LA H GC + ++ +
Sbjct: 586 VTDQNGNHVIQKCIEKIPTH--LIQFIIDSFHGHIYQLATHPYGCRVIQRILEHCAEKQV 643
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL + A SL ++ GNYV+QHVLE P I L+G +LS K S V+
Sbjct: 644 APILDELMRCAVSLVQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLSQHKFASNVI 703
Query: 337 QNCLKYRITVN--YIVEEFLLN------SDQIFRVACDKYGNYVIQTALIETMRPNSLHL 388
+ C+++ T I+ E L + S+ + ++ D Y NYVIQ +++ + P +
Sbjct: 704 EKCVQHGCTAERILIINEILGDANSPNSSNVLLKILKDPYANYVIQ-KILDIVEPAQRDM 762
Query: 389 HQRLVTKLQQNLDSL-RFGYGKHVYNFIKDCDLQN 422
++ ++Q + +L + GKH+ + I+ N
Sbjct: 763 ---IINRIQPFVPTLKKVTPGKHIISRIEKYSANN 794
>gi|212526552|ref|XP_002143433.1| mRNA binding protein Pumilio 2, putative [Talaromyces marneffei
ATCC 18224]
gi|210072831|gb|EEA26918.1| mRNA binding protein Pumilio 2, putative [Talaromyces marneffei
ATCC 18224]
Length = 929
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 146/322 (45%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL S +S D+VF + Q++ + + +V K E N+
Sbjct: 507 IVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 566
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ S + S +G ++K ++ + L D +K L + +M
Sbjct: 567 QKRILANQMKSH---ILALSTQMYGCRVVQKALEHI-----LTDQQAAMVKELDQHVMKC 618
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ H+ + FI A + LA H GC + ++ + R
Sbjct: 619 VRDQNGNHVIQKAIERVPTHHIR--FIIDAFKGNVNKLATHPYGCRVIQRMLEHCETADR 676
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + V SL + GNYV+QHV+E + + S+ + + S K S VV
Sbjct: 677 ESILTELHVCTESLIPDQFGNYVIQHVIENGEEKDRSVMIKSVVKNIHNFSKHKFASNVV 736
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ +++ R + + + + D+YGNYVIQ L + +
Sbjct: 737 EKSIEFGEESQRREIIRLLTAHNDRGESPLLALMRDQYGNYVIQKVLGQVKDSE----RE 792
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++ +++ L L +F YGK +
Sbjct: 793 MIIDEIKPLLSQLKKFSYGKQI 814
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 10/164 (6%)
Query: 220 KPGSSVVLQC--LEQIYHHNNKND-FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+P S V++ LE+ HN N + + H + + + G + ++ +
Sbjct: 473 EPDPSQVVRSPLLEEFRTHNKSNKRYELKDIYNHIVEFSGDQHGSRFIQQKLESANSDEK 532
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
Q+ I N L + GNYVVQ + E + + ++ H + LS G VV
Sbjct: 533 DQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQSQKRILANQMKSHILALSTQMYGCRVV 592
Query: 337 QNCLKYRITVN--YIVEEFLLNSDQ-IFRVACDKYGNYVIQTAL 377
Q L++ +T +V+E DQ + + D+ GN+VIQ A+
Sbjct: 593 QKALEHILTDQQAAMVKEL----DQHVMKCVRDQNGNHVIQKAI 632
>gi|300120006|emb|CBK19560.2| unnamed protein product [Blastocystis hominis]
Length = 328
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 127/270 (47%), Gaps = 9/270 (3%)
Query: 111 QYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITS 170
++LQ L + +D ++ + E ++ NQ+ ++F K +E ++ Q ++ + + S
Sbjct: 12 RHLQLALDQEGTSLVDVLYEEMGERIGLLMTNQFGNYLFQKILEMSSDQQRRQLLVMVQS 71
Query: 171 QDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCL 230
Q +AS D G+ ++KL+ + P +++ ++ L L G+ V+ CL
Sbjct: 72 Q---LREASKDVHGTRCVQKLIH-LCRLPDMVNRILDGLCPFVVELCADVNGNHVIKCCL 127
Query: 231 EQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASL 290
+ + + + ++HC+ ++ GC + I+ G ++ I +A L
Sbjct: 128 KSMAAELRQR--LLDEVVDHCIEISKEMYGCSIIQKCIEIASGESADRLFDTIEAHALDL 185
Query: 291 SRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNY 348
R+ NYV+Q+++E P C + H +LS KC S VV+ L T +
Sbjct: 186 MRDRYANYVIQYLIENARPSESLRFCRCVLTHVEELSKEKCSSNVVEKSLNRGDEATRDS 245
Query: 349 IVEEFLLNSDQIFRVACDKYGNYVIQTALI 378
I+ E ++N+ + + D Y NYVIQ AL+
Sbjct: 246 IINE-IVNASDLRSMLLDPYANYVIQKALV 274
>gi|356538980|ref|XP_003537978.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1047
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 155/327 (47%), Gaps = 24/327 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + V+ + ++ + + +V KF E
Sbjct: 716 VVEFSADQYGSRFIQQKLETATTEEKKMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAS 775
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD ++ ++ L +M
Sbjct: 776 QRRELANKLLGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRC 827
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + DFI + + L+ H GC + ++ + P
Sbjct: 828 VRDQNGNHVIQKCIECVPE--DAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCEDPTT 885
Query: 277 KQILYLISVNAAS-LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+Q + + A S L+++ GNYVVQHVLE + +I L G + +S K S V
Sbjct: 886 QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKSHERSSIIKELAGKIVQMSQQKFASNV 945
Query: 336 VQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 946 VEKCLTFGGPSERQLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 1002
Query: 391 RLVTKLQQNLDSL-RFGYGKHVYNFIK 416
++++++ +L++L ++ YGKH+ ++
Sbjct: 1003 -ILSRIKVHLNALKKYTYGKHIVTRVE 1028
>gi|15131678|emb|CAC48394.1| putative RNA binding protein [Saprolegnia parasitica]
Length = 773
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 145/332 (43%), Gaps = 20/332 (6%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A ++ A+D+ GS+++Q+KL + + D VF + ++ + + +V KF +
Sbjct: 443 ARGHMVEFAKDQHGSRFIQQKLETAKADIKDIVFAEIYPVALTLMTDVFGNYVIQKFFDF 502
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
L + I+ + ++ ++ +G I+K ++ + N P L L+ + + +
Sbjct: 503 GTSHHLSLLLRTISGR---VLELALQMYGCRVIQKALE-LKNMPEKLHLISELTGHVLKC 558
Query: 216 LMMTKPGSSVVLQCLEQIYHHN----NKNDFIYQAALEHCLYLACHEQGCINMNNFIDEM 271
+ + G+ VV +C+E + + FI A L + LA H GC + ++
Sbjct: 559 VK-DQNGNHVVQKCIEILPWKTPVAMDVGGFILSAFLGNVYSLATHPYGCRVIQRVLEHC 617
Query: 272 KGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
+ IL I L + GNYV+QHVLE P + + + S K
Sbjct: 618 TEAQMAPILKEIHDCCCLLVEDQYGNYVIQHVLEHGQPSERSQVINKVYPDIVRFSYHKF 677
Query: 332 GSFVVQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNS 385
S V++ CL Y + V +++E + + D+Y NYV+Q LI+
Sbjct: 678 ASNVIEKCLMYASVHQLHVIVAHVMEANERGECPLQVMMKDQYANYVVQK-LIDVADAEE 736
Query: 386 LHLHQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
+R+ ++ L RF +GKH+ N ++
Sbjct: 737 ---RERMXVIIKTQASHLKRFNFGKHILNRLE 765
>gi|449273163|gb|EMC82771.1| Pumilio like protein 1, partial [Columba livia]
Length = 987
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 14/290 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 687 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 746
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + P + +++ L +
Sbjct: 747 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIP--PDQQNEMVRELDGHVLKCVKD 801
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 802 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 859
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 860 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 919
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRP 383
+ + R +++E +D ++ + D+Y NYV+Q +I+ P
Sbjct: 920 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEP 968
>gi|357148484|ref|XP_003574782.1| PREDICTED: pumilio homolog 5-like [Brachypodium distachyon]
Length = 983
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 154/327 (47%), Gaps = 20/327 (6%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
S I+ + D+ GS+++Q+KL + + VF V ++ + + +V KF E
Sbjct: 657 SRIVEYSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHATSLMTDVFGNYVIQKFFEHGT 716
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
+Q + ++ + S+ +G ++K ++ V ++LV++ + R +
Sbjct: 717 PEQRRDLGTKLVGH---VLPLSLQMYGCRVVQKALE-VLELDQKIELVLELDGNIMRCVR 772
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +C+E + F+ + L+ H GC + ++ G +
Sbjct: 773 -DQNGNHVIQKCIECV--PTEHIGFVVSSFQGQVASLSMHPYGCRVIQRVLEHCGGDSQG 829
Query: 278 Q-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
Q I+ I +A L+++ GNYV QHVLE + I L G + +S K S V+
Sbjct: 830 QCIIDEILQSACVLAQDQYGNYVTQHVLEKGKSHERAQIISKLAGQVVTMSQNKFASNVI 889
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ C ++ + + IV++ N D + + D+Y NYV+Q ++ET L
Sbjct: 890 EKCFQHGDFAERDLLIREIVQQTEGN-DTLLAMMKDQYANYVVQK-ILETCNDQQREL-- 945
Query: 391 RLVTKLQQNLDSLR-FGYGKHVYNFIK 416
LV++++ +L +LR + YGKH+ + ++
Sbjct: 946 -LVSRVKGHLQALRKYTYGKHIASRVE 971
>gi|356542325|ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1033
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 153/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 702 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAS 761
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD ++ ++ L +M
Sbjct: 762 QKRELANKLLGH---VLALSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRC 813
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + FI + + L+ H GC + ++ K P
Sbjct: 814 VRDQNGNHVIQKCIECV--PEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTT 871
Query: 277 KQILYLISVNAAS-LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+Q + + A S L+++ GNYVVQHVLE P+ +I L G + +S K S V
Sbjct: 872 QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELAGKIVQMSQQKFASNV 931
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 932 VEKCLTFGGPSERQLLVCEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 988
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++ +++ +L++L ++ YGKH+
Sbjct: 989 -ILYRIKVHLNALKKYTYGKHI 1009
>gi|358336596|dbj|GAA55061.1| pumilio homolog 2 [Clonorchis sinensis]
Length = 1498
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 154/335 (45%), Gaps = 37/335 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE--TCN 157
++ A+D+ GS+++Q+KL + + + VF + + +++ + + +V KF E T
Sbjct: 1106 MVEFARDQHGSRFIQQKLETASTVEKNAVFAEILPHSGKLMTDVFGNYVIQKFFEFGTKE 1165
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDL-VMKALKRLFRLL 216
+ +LL LQ V+ + +G I+K +++V PP + ++ L+
Sbjct: 1166 QKELLSQRLQ-----GHVVEFATQMYGCRVIQKALESV---PPDTKIRIVSELRPYVTRC 1217
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ + G+ V+ +C+E + ++ DFI A + L+ H GC + ++ +
Sbjct: 1218 VKDQNGNHVIQKCIECV--QPSELDFIIAAFRGQVVSLSSHPYGCRVIQRILEHCLAEQT 1275
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + L ++ GNYV+QHVLE P I SLRG LS K S V+
Sbjct: 1276 RPILEELHEGVDHLVKDQYGNYVIQHVLEHGLPGDKSRIIQSLRGRVSTLSAHKFASNVM 1335
Query: 337 QNCLKYRITVN--YIVEEFL-----LN------------SDQIFRVACDKYGNYVIQTAL 377
+ + +++E L LN + + + D+Y NYV+Q +
Sbjct: 1336 EKAIANAQPSERAILIDEILHPPTCLNLSGESVTTPSSSNSSLIDMMKDQYANYVVQR-M 1394
Query: 378 IETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
+E + + L++++Q + LR F YGKH+
Sbjct: 1395 LELAE---MDQRRSLISRIQPIQNLLRKFNYGKHI 1426
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 21/213 (9%)
Query: 188 IRKLMKAVANRPPLLDLVMKALKRLFRLLMMT-----------KPGSSVVLQCLEQIYHH 236
IR L++A+A R L V + L+ LL +T P + L LE+ +
Sbjct: 1034 IRWLLRALA-RHHLPQAVGRLASSLYSLLFLTGISTCPTAINSAPTNRSAL--LEEFRNS 1090
Query: 237 NNKNDFIYQAAL-EHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFS 295
N + + + L +H + A + G + ++ + + I ++ L +
Sbjct: 1091 NGRFQQVTLSQLRDHMVEFARDQHGSRFIQQKLETASTVEKNAVFAEILPHSGKLMTDVF 1150
Query: 296 GNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEF 353
GNYV+Q E E + L+GH ++ + G V+Q L+ T IV E
Sbjct: 1151 GNYVIQKFFEFGTKEQKELLSQRLQGHVVEFATQMYGCRVIQKALESVPPDTKIRIVSEL 1210
Query: 354 LLNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
+ R D+ GN+VIQ IE ++P+ L
Sbjct: 1211 ---RPYVTRCVKDQNGNHVIQKC-IECVQPSEL 1239
>gi|302855378|ref|XP_002959184.1| hypothetical protein VOLCADRAFT_70487 [Volvox carteri f.
nagariensis]
gi|300255440|gb|EFJ39746.1| hypothetical protein VOLCADRAFT_70487 [Volvox carteri f.
nagariensis]
Length = 409
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 150/330 (45%), Gaps = 32/330 (9%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++QE S +D FN V Q++ + + +V KF+E + RI
Sbjct: 87 DQDGSRFVQENFESLRPEEIDAAFNDVLPHLLQLMTDMFGNYVVQKFLEHGTPEHRARIA 146
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSV 225
I + S+ FG +++K ++ V +D+V + + R + + GS V
Sbjct: 147 NAIQGN---VLSLSLQLFGCRTMQKALE-VFTEDQQVDIVSELNGHVMRCVC-DQNGSHV 201
Query: 226 VLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISV 285
+ +C+E + H++ + + + L+ H GC + + + ++ RR+ + +
Sbjct: 202 IQKCIEYVPPHHSAG--LLDNIVTCVVPLSTHLHGCRIIRHILKYVRDQRRRAAVMADIL 259
Query: 286 NAA-SLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
AA L+++ GNYV+QHVLE P +I SL + LS+ K S V++ CL +
Sbjct: 260 GAAVQLAQDQYGNYVIQHVLERGTPEEKSSIIRSLSATVVQLSMHKFASNVIEKCLIHGS 319
Query: 345 TVNYIVEEFLLN----------------SDQIFRVACDKYGNYVIQTALIETMRPNSLHL 388
T + + ++N SD + + + +GNYV+Q L
Sbjct: 320 TAD---RDLIINRMLGAQTLQIQLETGYSDPVQGMMRNPFGNYVVQKVLEVCTDEQR--- 373
Query: 389 HQRLVTKLQQNLDSLR-FGYGKHVYNFIKD 417
+ ++ +++ L L+ F Y +HV +++
Sbjct: 374 -EAMLARVRMQLHELKHFHYSRHVVARVEN 402
>gi|431891161|gb|ELK02038.1| Pumilio like protein 1 [Pteropus alecto]
Length = 1349
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 149/316 (47%), Gaps = 18/316 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 885 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 944
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 945 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 999
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 1000 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1057
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1058 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1117
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1118 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1173
Query: 394 TKLQQNLDSLR-FGYG 408
K++ ++ +LR + YG
Sbjct: 1174 HKIRPHIATLRKYTYG 1189
>gi|440800301|gb|ELR21340.1| Pumiliofamily RNA binding repeat domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 1039
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 152/329 (46%), Gaps = 30/329 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q++L VF + +++ + + +V KF E +
Sbjct: 716 IVEFSGDQHGSRFIQQQLEEASPAEKQMVFKEILPSALRLMTDVFGNYVIQKFFEHGTPE 775
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q+ + ++ + S+ +G I+K ++ ++ + V+K L+ +
Sbjct: 776 QIKILGDELIGN---VLALSMQMYGCRVIQKALEVISVE--QQEKVVKELEGNIMKCVKD 830
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ +C+E++ + FI +LA H GC + ++ + I
Sbjct: 831 QNGNHVIQKCIEKV--PSPLIQFI-------VYHLATHPYGCRVIQRILEYCTEEQTTPI 881
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + SL ++ GNYV+QHVLE P I LRG + LS K S VV+ C
Sbjct: 882 LDELLRCTISLVQDQYGNYVIQHVLEHGKPQDKAPILHKLRGQLLQLSQHKFASNVVEKC 941
Query: 340 LKYRITV-------NYIVEEFL-LNSDQIFRVAC---DKYGNYVIQTALIETMRPNSLHL 388
++ ++EE L L +D + D+Y NYVIQ L++ + N
Sbjct: 942 IQCAFGPYGDESDRQMVIEEILQLRNDGATPLQIMMKDQYANYVIQK-LLDVVNENQ--- 997
Query: 389 HQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
+L+TK++ ++ +L ++ YGKH+ N ++
Sbjct: 998 RDQLITKIRPHVPALKKYTYGKHIINRLE 1026
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
S+V L + + +N F Q + H + + + G + ++E ++ +
Sbjct: 688 SAVGRSSLLEEFRNNKNRKFTLQDIIGHIVEFSGDQHGSRFIQQQLEEASPAEKQMVFKE 747
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I +A L + GNYV+Q E P I+ + L G+ + LS+ G V+Q L+
Sbjct: 748 ILPSALRLMTDVFGNYVIQKFFEHGTPEQIKILGDELIGNVLALSMQMYGCRVIQKALEV 807
Query: 343 RITV---NYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRP 383
I+V +V+E N I + D+ GN+VIQ + + P
Sbjct: 808 -ISVEQQEKVVKELEGN---IMKCVKDQNGNHVIQKCIEKVPSP 847
>gi|357492315|ref|XP_003616446.1| Pumilio-like protein [Medicago truncatula]
gi|355517781|gb|AES99404.1| Pumilio-like protein [Medicago truncatula]
Length = 1066
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 152/350 (43%), Gaps = 47/350 (13%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + VFN + ++ + + +V KF E +
Sbjct: 698 VVEFSADQYGSRFIQQKLETASMEEKTMVFNEIMPKALTLMTDVFGNYVVQKFFEHGTAE 757
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMK--------AVANRPPL---------- 201
Q+ + Q+T + S+ +G I+K V RP
Sbjct: 758 QIRELADQLTGH---VLTLSLQMYGCRVIQKQSHYAKGARKYEVVGRPDGFPRLLIFFSF 814
Query: 202 ----------LDLVMKALKRLFRLLMM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAAL 248
LD K + L +M + G+ V+ +C+E + K FI
Sbjct: 815 YIVQAIEVVNLDQKTKMVTELDGHIMRCVRDQNGNHVIQKCIECVPEDEIK--FIVSTFY 872
Query: 249 EHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAAS-LSRNFSGNYVVQHVLELE 307
+ + L+ H GC + ++ P+ +QI+ + S L+++ GNYVVQHVLE
Sbjct: 873 DQVVTLSTHPYGCRVIQRVLEYCHDPKTQQIMMDEILQCVSMLAQDQYGNYVVQHVLEHG 932
Query: 308 DPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YIVEEFLLNSDQ---IFR 362
P+ I G + +S K S V++ CL + +V E + ++D +
Sbjct: 933 KPHERTAIIKEFTGQIVQMSQQKFASNVIEKCLSFGTPTERQVLVNEMIGSTDDNEPLQV 992
Query: 363 VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
+ D++ NYV+Q L ET L L ++ +++ +L++L ++ YGKH+
Sbjct: 993 MMKDQFANYVVQKVL-ETCDDQQLEL---ILNRIKVHLNALKKYTYGKHI 1038
>gi|254568676|ref|XP_002491448.1| Protein of the mitochondrial outer surface [Komagataella pastoris
GS115]
gi|238031245|emb|CAY69168.1| Protein of the mitochondrial outer surface [Komagataella pastoris
GS115]
gi|328352042|emb|CCA38441.1| Pumilio homolog 1 [Komagataella pastoris CBS 7435]
Length = 759
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 188/418 (44%), Gaps = 57/418 (13%)
Query: 40 SPPVPLYPQS-TWAVPSLSGRSTVP-------NLSGTSNPQYETITSSN-------FQTP 84
SPP+P+ P+ + VPS + + P N SG+ P S N +++P
Sbjct: 345 SPPIPMLPEGMSGQVPSPFPQHSAPPKFPAAANNSGSKPPAKNGRASKNRPRAQHIYRSP 404
Query: 85 L--GFQANP----------FQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVV 132
L F++N + H A+D+ GS+++Q++L+ D +F +
Sbjct: 405 LLEEFRSNKAGKDYRLRDIYGHGPE-----FARDQHGSRFIQQQLSKATKEEKDTIFEEI 459
Query: 133 SEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLM 192
+++++ + + +V K+ E +E+Q R+ +T + Q S+ +G +++ +
Sbjct: 460 EPTSYELMTDVFGNYVIQKYFEHGSEEQKARLLKIMTGKVQSL---SLQMYGCRVVQRAL 516
Query: 193 KAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCL 252
+ V + + L+ L+ + G+ V+ + +E+I ++ FI ++ +H
Sbjct: 517 EFVQLEQQIE--IASELQDNVLQLVEDQNGNHVIQKSIEKISF--DQISFILESLRQHIY 572
Query: 253 YLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLI 312
+L+ H GC + ++ +K IL ++S + L ++ GNYV+QH+LE +
Sbjct: 573 HLSTHPYGCRVIQRLLEYCSESEQKFILEVLSNHIFYLIQDQYGNYVIQHILEFGEEGYR 632
Query: 313 ETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN-YIVEEFLLNSDQIFRVAC------ 365
TI + + + S K S V+ C+ Y + +++ LL ++ V
Sbjct: 633 STITEIVTKNLVMFSKHKFASNAVEKCIIYGNKEHRHMLFNELLKDNKSLEVTTVDDNSA 692
Query: 366 ------DKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
D + NYV+Q +++ + + L L+ K++Q L + + Y KH+ + K
Sbjct: 693 LALMMKDPFANYVVQK-MVDALDEDDKKL---LIIKIKQYLKQISKSSYAKHLASIEK 746
>gi|168030468|ref|XP_001767745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681065|gb|EDQ67496.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1148
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 156/330 (47%), Gaps = 30/330 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + VF V ++ + + +V KF E
Sbjct: 806 VVEFSADQHGSRFIQQKLETATLEDKNMVFQEVLPRALVLMTDVFGNYVIQKFFEHGTHQ 865
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q R L + Q+ V S+ +G I+K ++ V +D + + L +M
Sbjct: 866 Q--RRELASKLEGQVLV-LSLQMYGCRVIQKALEVVD-----VDQQTQLVSELDGNVMRC 917
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI----DEMK 272
+ G+ V+ +C+E + K FI A + L+ H GC + + DE K
Sbjct: 918 VRDQNGNHVIQKCIECV--PPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQK 975
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+K I+ I + +L+++ GNYVVQHVLE + I L G + +S K
Sbjct: 976 ---QKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDHERSEIITKLAGQIVQMSQHKFA 1032
Query: 333 SFVVQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL+Y V +++E L +D+ + + D++ NYV+Q L ET +
Sbjct: 1033 SNVVEKCLEYGGPVERQILIDEMLGLTDENEPLQAMMKDQFANYVVQKVL-ETCDESQRE 1091
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
L L+ +++ +L +L ++ YGKH+ ++
Sbjct: 1092 L---LLGRIRVHLHALKKYTYGKHIVARVE 1118
>gi|449681928|ref|XP_002162083.2| PREDICTED: uncharacterized protein LOC100200828, partial [Hydra
magnipapillata]
Length = 940
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 114/243 (46%), Gaps = 5/243 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + ++ + + +V KF E + +
Sbjct: 684 IVEFSQDQHGSRFIQQKLERASVLEKTMVFNEILSAAYSLMTDVFGNYVIQKFFEFGSPE 743
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + P+ ++K L +
Sbjct: 744 QKLLLAQRIKGH---VLPLALQMYGCRVIQKALETIPSEIPIHGELVKELDGHVLKCVKD 800
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E I + + FI A L+ H GC + ++ + I
Sbjct: 801 QNGNHVVQKCIECI--DSTQLQFIIDAFQGQVYALSTHPYGCRVIQRILEHCTQEQTAPI 858
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P TI +RG+ + LS K S V++ C
Sbjct: 859 LAELHEHTERLIQDQYGNYVIQHVLEHGSPEDKSTIVNIVRGNVLLLSQHKFASNVIEKC 918
Query: 340 LKY 342
+ +
Sbjct: 919 VTH 921
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKG--PRRKQILYLISVNAASLSRNFSGNYVVQHVLELE 307
H L LA GC + ++ + P +++ + + ++ +GN+VVQ +E
Sbjct: 755 HVLPLALQMYGCRVIQKALETIPSEIPIHGELVKELDGHVLKCVKDQNGNHVVQKCIECI 814
Query: 308 DPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQIFRVAC 365
D ++ I + +G LS G V+Q L++ + I+ E +++++ +
Sbjct: 815 DSTQLQFIIDAFQGQVYALSTHPYGCRVIQRILEHCTQEQTAPILAELHEHTERLIQ--- 871
Query: 366 DKYGNYVIQTAL 377
D+YGNYVIQ L
Sbjct: 872 DQYGNYVIQHVL 883
>gi|335892195|pdb|2YJY|A Chain A, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
gi|335892196|pdb|2YJY|B Chain B, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
Length = 350
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 150/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 27 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 86
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 87 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQ--NEMVRELDGHVLKCVKD 141
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 142 QNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 199
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ G+YV++HVLE P I +RG+ + LS K S VV+ C
Sbjct: 200 LEELHQHTEQLVQDQYGSYVIRHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 259
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 260 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 315
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 316 HKIRPHIATLRKYTYGKHI 334
>gi|294655796|ref|XP_457992.2| DEHA2C07128p [Debaryomyces hansenii CBS767]
gi|199430612|emb|CAG86050.2| DEHA2C07128p [Debaryomyces hansenii CBS767]
Length = 820
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 163/356 (45%), Gaps = 35/356 (9%)
Query: 79 SNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQ 138
SNF+ F + + H + +D+ GS+++Q+KL + +FN + + ++
Sbjct: 466 SNFKGKEYFLKDIYGHA-----VEFTKDQHGSRFIQQKLPESSDEEKEVIFNEIRDISYD 520
Query: 139 IICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANR 198
++ + + +V K+ E + ++ + + + S+ FG +++ ++A+
Sbjct: 521 LMTDVFGNYVIQKYFEHGSP---IQKKILLDCMIGHIYELSLQTFGCRVVQRALEAID-- 575
Query: 199 PPLLD---LVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLA 255
LD +++ LK + + G+ V+ + +E I ++ +F+ ++ +L+
Sbjct: 576 ---LDGQIQIIEELKDYILVCAKDQNGNHVIQKSIETIPF--DRIEFVLESLDNQIYHLS 630
Query: 256 CHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETI 315
H GC + ++ RK+IL ++ L ++ GNYV+QH LE +P E I
Sbjct: 631 THPYGCRVIQRLLEHSDAEDRKKILGELNRFIFYLIQDQYGNYVMQHTLERGNPEDREEI 690
Query: 316 CFSLRGHYIDLSLTKCGSFVVQNCLKY-------RITVNYIVE------EFLLNSDQIFR 362
+ G ++ S K S V++ C+K+ RI ++ E + + +
Sbjct: 691 LKIVLGSVVNFSKHKFASNVIEKCIKFGTLDQRRRILHEVMIGNEDYNVETVSDDSALAL 750
Query: 363 VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLD--SLRFGYGKHVYNFIK 416
+ D+Y NYVIQ L+E S + LV KL+Q L S + YGKH+ + K
Sbjct: 751 MMKDQYANYVIQK-LVEGFDAKSDE-KKILVVKLRQYLKQISSKNNYGKHLASVEK 804
>gi|451845819|gb|EMD59130.1| hypothetical protein COCSADRAFT_175690 [Cochliobolus sativus
ND90Pr]
Length = 893
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 140/297 (47%), Gaps = 32/297 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ A D+ GS+++Q+KL + +S + VF + E Q++ + + +V KF E ++
Sbjct: 514 VVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQT 573
Query: 160 QLLRITLQITSQ-----DQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR 214
Q + ++ +Q++ + R + KA+ + L + +K L +
Sbjct: 574 QKKILVGKMKGHVLELANQMY-----------ACRVVQKALEH--ALTEQQASMVKELEK 620
Query: 215 LLMMT---KPGSSVVLQCLEQI-YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
++ T + G+ V+ + ++++ HH K I +A + L+ + GC + +++
Sbjct: 621 DVLKTVKDQNGNHVIQKVIDRVPMHHIQK---IVEAFRGNVGVLSVNSYGCRVIQRLLEK 677
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
++ P+R+ IL + L + GNYV QHV+E P I ++ ++ S K
Sbjct: 678 VEEPQRRFILTELHAEGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSKHK 737
Query: 331 CGSFVVQNCL------KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETM 381
S VV+ CL + R V+ ++ + + + D YGNYVIQ L++T+
Sbjct: 738 FASNVVERCLICSNDAQRRELVSVVLSKNERGESNVMNLLRDGYGNYVIQK-LLDTL 793
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 5/154 (3%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + A + G + ++ ++ + + NA L ++ GNYV+Q E D
Sbjct: 513 HVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQ 572
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ + ++GH ++L+ VVQ L++ +T L D + + D+ G
Sbjct: 573 TQKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQASMVKELEKD-VLKTVKDQNG 631
Query: 370 NYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL 403
N+VIQ + +H Q++V + N+ L
Sbjct: 632 NHVIQKVIDRV----PMHHIQKIVEAFRGNVGVL 661
>gi|451995215|gb|EMD87684.1| hypothetical protein COCHEDRAFT_1034063 [Cochliobolus
heterostrophus C5]
Length = 889
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 140/297 (47%), Gaps = 32/297 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ A D+ GS+++Q+KL + +S + VF + E Q++ + + +V KF E ++
Sbjct: 510 VVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQT 569
Query: 160 QLLRITLQITSQ-----DQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR 214
Q + ++ +Q++ + R + KA+ + L + +K L +
Sbjct: 570 QKKILVGKMKGHVLELANQMY-----------ACRVVQKALEH--ALTEQQASMVKELEK 616
Query: 215 LLMMT---KPGSSVVLQCLEQI-YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
++ T + G+ V+ + ++++ HH K I +A + L+ + GC + +++
Sbjct: 617 DVLKTVKDQNGNHVIQKVIDRVPMHHIQK---IVEAFRGNVGVLSVNSYGCRVIQRLLEK 673
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
++ P+R+ IL + L + GNYV QHV+E P I ++ ++ S K
Sbjct: 674 VEEPQRRFILTELHAEGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSKHK 733
Query: 331 CGSFVVQNCL------KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETM 381
S VV+ CL + R V+ ++ + + + D YGNYVIQ L++T+
Sbjct: 734 FASNVVERCLICSDDAQRRELVSVVLSKNERGESNVMNLLRDGYGNYVIQK-LLDTL 789
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 5/154 (3%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + A + G + ++ ++ + + NA L ++ GNYV+Q E D
Sbjct: 509 HVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQ 568
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ + ++GH ++L+ VVQ L++ +T L D + + D+ G
Sbjct: 569 TQKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQASMVKELEKD-VLKTVKDQNG 627
Query: 370 NYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL 403
N+VIQ + +H Q++V + N+ L
Sbjct: 628 NHVIQKVIDRV----PMHHIQKIVEAFRGNVGVL 657
>gi|190348753|gb|EDK41273.2| hypothetical protein PGUG_05371 [Meyerozyma guilliermondii ATCC
6260]
Length = 761
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 155/341 (45%), Gaps = 48/341 (14%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ-- 160
+D+ GS+++Q+KL + + + +FN + E +++++ + + +V K+ E N Q
Sbjct: 426 FTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKYFEYGNNTQKQ 485
Query: 161 -LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
LL+ + + S+ +G +++ ++AV + + ++ L+ +
Sbjct: 486 VLLKFMIG------HIYELSLQMYGCRVVQRALEAVDLKGQIS--IIDELRDHILVCAKD 537
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ- 278
+ G+ V+ + +E+I ++ FI + + +L+ H GC + + E P+R+Q
Sbjct: 538 QNGNHVIQKSIEKIPF--SEITFIMDSLEDQIYHLSTHPYGCRVIQRLL-EYADPKRQQE 594
Query: 279 --------ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
I YLI ++ GNYV+QH+LE E I + G ++ S K
Sbjct: 595 MLDELNRFIFYLI--------QDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSKHK 646
Query: 331 CGSFVVQNCLKYRIT--VNYIVEEFLL-NSDQIFRVACDK----------YGNYVIQTAL 377
S V++ C+K+ I++E +L N D D+ Y NYVIQ L
Sbjct: 647 FASNVIEKCIKFGTVKQKRRILDEVMLGNEDPTVETVSDESPLALMMKDQYANYVIQK-L 705
Query: 378 IETMRPNSLHLHQRLVTKLQQNLD--SLRFGYGKHVYNFIK 416
+E + LV KL+Q L S + YGKH+ + K
Sbjct: 706 VEGFDAKG-EEKRMLVMKLRQYLKQISSKNTYGKHLASVEK 745
>gi|320581830|gb|EFW96049.1| Member of the PUF protein family [Ogataea parapolymorpha DL-1]
Length = 548
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 150/323 (46%), Gaps = 16/323 (4%)
Query: 97 NSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETC 156
++ IL L++D+ G ++LQ+K+ + +F V + + +++ + + ++ K I
Sbjct: 203 STDILALSKDQFGCRFLQKKIDEDFGKNYPLIFKEVHQHSIELMMDPFGNYLIQKIILNA 262
Query: 157 NEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
+ ++L I I L ++ G+ + +KL+ ++ L+ L L
Sbjct: 263 SAEELKLILTNIAP---LIHTICRNQHGTRACQKLIDCLSTTG-HYRLLQNCLTPHVVNL 318
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ VV +C+ + N+ FI + + + ++ H+ GC + ++ +
Sbjct: 319 IQDLNGNHVVQKCIAKF--QNDDLQFIIDSICNNIVKISTHKHGCCVLQKLLNRCNHQQV 376
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
Q+ I N+ L ++ GNYVVQ ++ L+ P L + + DLS K S VV
Sbjct: 377 LQLGSEIVANSYQLMQDQFGNYVVQFLISLDIPSLNSELVKIMVPFINDLSTQKFSSNVV 436
Query: 337 QNCLKYRIT--VNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ CLK + N +V+ L Q+ V D++GNYV+QTA+ + N L R
Sbjct: 437 EKCLKIKFDQGFNPLVDALL--QPQVLGVLVKDQFGNYVVQTAMDNSSPDNKL----RFA 490
Query: 394 TKLQQNLDSLRFG-YGKHVYNFI 415
++ L +R +GK ++N +
Sbjct: 491 LAIKPMLPMVRHASFGKRIHNKV 513
>gi|50552866|ref|XP_503843.1| YALI0E12001p [Yarrowia lipolytica]
gi|49649712|emb|CAG79436.1| YALI0E12001p [Yarrowia lipolytica CLIB122]
Length = 752
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 150/321 (46%), Gaps = 23/321 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q++L S +F + + Q++ + + +V KF +
Sbjct: 432 IVEFSGDQHGSRFIQQQLESASGEEKSAIFEEIRPSSLQLMTDVFGNYVVQKFFVHGSNA 491
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAV--ANRPPLLDLVMKALKRLFRLLM 217
Q +T Q+ + S+ +G ++K ++ V A + L++ + K + R +
Sbjct: 492 QKAVLTKQMEGH---VLSLSLQMYGCRVVQKAIEYVDTAKQAHLINELDKHVLRCVK--- 545
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ + +E+I + + FI A E LA H GC + ++ + +
Sbjct: 546 -DQNGNHVIQKAIEKIPPQHIQ--FIINAFNEQVYQLATHPYGCRVIQRMLEHCE-EAQA 601
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
IL + A L ++ GNYV+QHVLE P E + ++ H + S K S VV+
Sbjct: 602 AILAELHNYAYHLIQDQYGNYVIQHVLEQGAPDDKEAMMLVIKQHVLIFSRHKFASNVVE 661
Query: 338 NCLKY--RITVNYIVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHLHQR 391
C+ Y R ++EE + I + D++ NYVIQ L++ L
Sbjct: 662 KCVIYGNRRQRRALIEEIATEREDGTLPITVMMKDQFANYVIQK-LLDVSEGEDFDL--- 717
Query: 392 LVTKLQQNLDSL-RFGYGKHV 411
LV+ ++ +L SL ++ YGKH+
Sbjct: 718 LVSIIKPHLASLKKYSYGKHL 738
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 6/157 (3%)
Query: 234 YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRN 293
+ +N F + H + + + G + ++ G + I I ++ L +
Sbjct: 415 FRNNKSKKFELKDLQGHIVEFSGDQHGSRFIQQQLESASGEEKSAIFEEIRPSSLQLMTD 474
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEF 353
GNYVVQ + + GH + LSL G VVQ ++Y V+ +
Sbjct: 475 VFGNYVVQKFFVHGSNAQKAVLTKQMEGHVLSLSLQMYGCRVVQKAIEY---VDTAKQAH 531
Query: 354 LLN--SDQIFRVACDKYGNYVIQTALIETMRPNSLHL 388
L+N + R D+ GN+VIQ A IE + P +
Sbjct: 532 LINELDKHVLRCVKDQNGNHVIQKA-IEKIPPQHIQF 567
>gi|300123315|emb|CBK24588.2| unnamed protein product [Blastocystis hominis]
Length = 497
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 8/277 (2%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
++ D G + LQ L + + + ++ V + +++ + + ++F K ++ + +Q
Sbjct: 177 MSHDHNGCRALQSCLDNASQKMIPIIYEEVGDSLTELMMDSFGNYLFQKLLDVSSVEQRR 236
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+ ++ + V AS D G+ S++KL++ + +L +M AL+ L G
Sbjct: 237 EVLRKVKHK---IVAASFDVHGTRSVQKLIQICHGQEDMLKDIMDALRGNIAKLSSDSNG 293
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL + ++Y+ ++ C+ ++ GC + +D +L
Sbjct: 294 NHVIQRCLNHMPEEYKV--YVYEEVVKSCVNISMQRHGCCVVQRCLDFAPEKYHNMMLDA 351
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I +A L + GNYV+Q+++E E I + G + LS K S V++ L +
Sbjct: 352 IVNSAVELICDPFGNYVIQYLIEKGKESEKERIARCVLGKVVALSCQKYSSNVIEKILLF 411
Query: 343 --RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
N +V E L ++ V D Y NYVIQ AL
Sbjct: 412 APESVRNEVVAE-LAECPKLRDVLHDIYANYVIQQAL 447
>gi|356542345|ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1053
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 156/327 (47%), Gaps = 24/327 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 722 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAS 781
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD ++ ++ L +M
Sbjct: 782 QRRELANKLLGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRC 833
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + FI + + L+ H GC + ++ K P
Sbjct: 834 VRDQNGNHVIQKCIECVPE--DAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTT 891
Query: 277 KQILYLISVNAAS-LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+Q + + A S L+++ GNYVVQHVLE P+ +I L + +S K S V
Sbjct: 892 QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELADKIVQMSQQKFASNV 951
Query: 336 VQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V + L +D+ + + D++ NYV+Q L ET L
Sbjct: 952 VEKCLTFGGPSERQLLVSQMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 1008
Query: 391 RLVTKLQQNLDSL-RFGYGKHVYNFIK 416
++++++ +L++L ++ YGKH+ + ++
Sbjct: 1009 -ILSRIKVHLNALKKYTYGKHIVSRVE 1034
>gi|384502000|gb|EIE92491.1| hypothetical protein RO3G_17013 [Rhizopus delemar RA 99-880]
Length = 259
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 144 YARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD 203
+ + K ++ C ++Q RI + ITS QA+++ G+ ++++L++ ++ P +D
Sbjct: 8 FGNYFCQKLLDKCTDEQRTRI-VHITSPH--LAQAALNIHGTRAVQRLIETIST-PEQID 63
Query: 204 LVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCIN 263
V+ AL L+ G+ V+ +CL + KN FIY A +C+ +A H+ GC
Sbjct: 64 SVIHALNPSVTALIKNLNGNHVIQKCLHYL-SKEEKNQFIYDAICTNCVEVASHKHGCCV 122
Query: 264 MNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHY 323
+ D ++ Q++ IS +A L + GNYVVQ+VL+L E I GH
Sbjct: 123 LQRCFDYATFKQKDQLVKEISKHALVLVQGPFGNYVVQYVLDLGLVTYSENINQKFLGHI 182
Query: 324 IDLSLTKCGSFVVQ 337
LS K S V++
Sbjct: 183 CSLSSQKFSSNVIE 196
>gi|301122711|ref|XP_002909082.1| pumilio-like mating protein M90 [Phytophthora infestans T30-4]
gi|262099844|gb|EEY57896.1| pumilio-like mating protein M90 [Phytophthora infestans T30-4]
Length = 926
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 152/337 (45%), Gaps = 36/337 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN-E 158
+ L A+D+ GS+++Q+KL D R FN + + ++ + + +V KF+E + E
Sbjct: 588 LFLFAKDQTGSRFIQQKLEKADERVKADAFNEIFPNSLLLMTDVFGNYVIQKFLEYGSLE 647
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
Q L + L ++ L +Q +G I++ ++ L +++ LK +
Sbjct: 648 QQQLLVELMTSNMISLALQV----YGCRVIQRALEVTQVEEQL--ALIRQLKGHVMKCVT 701
Query: 219 TKPGSSVVLQCLE---------------QIYHHNNKNDFIYQAALEHCLYLACHEQGCIN 263
+ G+ V+ +C+E Q + FI + + L+ H GC
Sbjct: 702 DQNGNHVLQKCIEAASWKRAAECKGLRPQRFVTGEDIQFIIDSFVGQAASLSTHSYGCRV 761
Query: 264 MNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHY 323
+ ++ + + +L I L ++ GNYVVQHV+ +P + ++
Sbjct: 762 IQRVLEHCAPNQIRPLLDEIIYKCRDLVKDQFGNYVVQHVISHGEPDQRNIVMQAVLPEI 821
Query: 324 IDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQ------IFRVACDKYGNYVIQT 375
S K S VV++CL++ + ++ IV +F+L D+ + + YGNYV+Q
Sbjct: 822 ARWSQHKYASNVVESCLEHATKEEISQIV-DFILQCDESGASCALLPMMKHMYGNYVVQK 880
Query: 376 ALIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
L+E + H R++ ++ N D L RF +GKHV
Sbjct: 881 -LLERADDHDRH---RIICIIRHNEDYLKRFTFGKHV 913
>gi|414869535|tpg|DAA48092.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 1043
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 152/325 (46%), Gaps = 20/325 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + VF + ++ + + +V KF E +
Sbjct: 719 VVEYSADQHGSRFIQQKLENCTAEEKTSVFAEILPHASALMTDVFGNYVIQKFFEHGTRE 778
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + S+ +G I+K ++ V +DLV + + R +
Sbjct: 779 QRRDLATKLVGH---VLPLSLQMYGCRVIQKALE-VMELDQKIDLVHELDGHIMRCVR-D 833
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ- 278
+ G+ V+ +C+E + F+ A L+ H GC + ++ G + Q
Sbjct: 834 QNGNHVIQKCIECV--PTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQC 891
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
I+ I L+++ GNYV QHVLE + I L G + +S K S V++
Sbjct: 892 IIDEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEK 951
Query: 339 CLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
C ++ + + IVE+ N++ + + D+Y NYV+Q ++ET + L L
Sbjct: 952 CFQHGDIAERDLLIRRIVEQTEGNNN-LLAMMKDQYANYVVQK-ILETCNEDQREL---L 1006
Query: 393 VTKLQQNLDSLR-FGYGKHVYNFIK 416
+++++ ++ +LR + YGKH+ + ++
Sbjct: 1007 LSRVKDHMQALRKYTYGKHIVSRVE 1031
>gi|47216145|emb|CAG10019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1287
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 164/379 (43%), Gaps = 62/379 (16%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL S VF+ + + +Q++ + + +V KF E + D
Sbjct: 900 IMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD 959
Query: 160 Q-----------LLRITLQ-------------ITSQDQLFVQASVDKFG-----SSSIRK 190
Q +L + LQ I S Q+ V FG +++++
Sbjct: 960 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVIVTGLAGGFGLFRLKGAAVQR 1019
Query: 191 LMKAV--------ANRPPLLDLVMKALKRLFRLLMM------------TKPGSSVVLQCL 230
+ V A + L VM AL + + M+ + G+ VV +C+
Sbjct: 1020 RLWIVGPGAVVEEAFKQGLDTDVMSALSPVLQSEMVRELDGHVLKCVKDQNGNHVVQKCI 1079
Query: 231 EQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASL 290
E + H FI A L+ H GC + ++ + IL + + L
Sbjct: 1080 ECVQPH--ALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQL 1137
Query: 291 SRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNY 348
++ GNYV+QHVLE I +RG+ + LS K S VV+ C+ + R
Sbjct: 1138 VQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAERAV 1197
Query: 349 IVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR 404
+++E ++ ++ + D+Y NYV+Q +I+ P + ++ K++ ++ +LR
Sbjct: 1198 LIDEVCSLTEGPHSALYTMMKDQYANYVVQK-MIDVAEPTQRKI---VMHKIRPHISTLR 1253
Query: 405 -FGYGKHVYNFIKDCDLQN 422
+ YGKH+ ++ ++N
Sbjct: 1254 KYTYGKHILAKLEKYYMKN 1272
>gi|256082284|ref|XP_002577388.1| pumilio [Schistosoma mansoni]
gi|350645490|emb|CCD59842.1| pumilio, putative [Schistosoma mansoni]
Length = 1309
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 150/337 (44%), Gaps = 40/337 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE--TCN 157
++ A+D+ GS+++Q+KL + + + VFN + + +++ + + +V KF E T
Sbjct: 943 MVEFARDQHGSRFIQQKLETATTAEKNSVFNEILPHSGKLMTDVFGNYVIQKFFEFGTKE 1002
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
+ +LL LQ V+ + +G I+K +++V + ++ L+ +
Sbjct: 1003 QKELLSQRLQ-----GHVVEFATQMYGCRVIQKALESVPAEAKIH--IVGELRPFVTRCV 1055
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +C+E + ++ DFI A + L+ H GC + ++ + +
Sbjct: 1056 KDQNGNHVIQKCIECVPP--SELDFIISAFRGQVVLLSSHPYGCRVIQRILEHCLPEQTR 1113
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
IL + L ++ GNYV+QHVLE I +LRG LS K S V++
Sbjct: 1114 PILDELHKGVEHLVKDQYGNYVIQHVLEHGSNEDKSRIIQNLRGRVCALSSHKFASNVME 1173
Query: 338 NCLKYRITVN--YIVEEFL-------LNSD-----------QIFRVACDKYGNYVIQTAL 377
+ + ++EE L +N D + + D+Y NYV+Q L
Sbjct: 1174 KAIANAVPSERAVLIEEILHPISNVNINGDTSSVTTNNISSSLVDMMKDQYANYVVQRML 1233
Query: 378 IETMRPNSLHLHQR--LVTKLQQNLDSLR-FGYGKHV 411
QR L+ +++ + LR F YGKH+
Sbjct: 1234 ------ELADTEQRRVLINRIRPMQNVLRKFNYGKHI 1264
>gi|414869530|tpg|DAA48087.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 1036
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 152/325 (46%), Gaps = 20/325 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + VF + ++ + + +V KF E +
Sbjct: 712 VVEYSADQHGSRFIQQKLENCTAEEKTSVFAEILPHASALMTDVFGNYVIQKFFEHGTRE 771
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + S+ +G I+K ++ V +DLV + + R +
Sbjct: 772 QRRDLATKLVGH---VLPLSLQMYGCRVIQKALE-VMELDQKIDLVHELDGHIMRCVR-D 826
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ- 278
+ G+ V+ +C+E + F+ A L+ H GC + ++ G + Q
Sbjct: 827 QNGNHVIQKCIECV--PTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQC 884
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
I+ I L+++ GNYV QHVLE + I L G + +S K S V++
Sbjct: 885 IIDEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEK 944
Query: 339 CLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
C ++ + + IVE+ N++ + + D+Y NYV+Q ++ET + L L
Sbjct: 945 CFQHGDIAERDLLIRRIVEQTEGNNN-LLAMMKDQYANYVVQK-ILETCNEDQREL---L 999
Query: 393 VTKLQQNLDSLR-FGYGKHVYNFIK 416
+++++ ++ +LR + YGKH+ + ++
Sbjct: 1000 LSRVKDHMQALRKYTYGKHIVSRVE 1024
>gi|448099238|ref|XP_004199094.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
gi|359380516|emb|CCE82757.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 154/329 (46%), Gaps = 24/329 (7%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+D+ GS+++Q+KL + +FN + + F+++ + + +V K+ E N+ Q
Sbjct: 475 FTKDQHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVIQKYFEHGNDVQ-- 532
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+ L + ++ S+ +G +++ ++A+ + L+++ LK + + G
Sbjct: 533 KEVLLDCMKGHIYT-LSMQMYGCRVVQRALEAIKVHQQI--LIIEELKDHILVCAKDQNG 589
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ + +E+I K F+ +A +L+ H GC + ++ +++IL
Sbjct: 590 NHVIQKSIEKIPFKRIK--FVLEALDNQIYHLSTHPYGCRVIQRLLEFSSPDDQRKILNE 647
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
++ L ++ GNYV+QH+LE E I + G ++ S K S V++ C+KY
Sbjct: 648 LNRFIFYLIQDQYGNYVMQHILERGSYEDREEILKVVLGSVVNFSKHKFASNVIEKCIKY 707
Query: 343 -------RITVNYIVE------EFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
RI ++ E + + + + D+Y NYVIQ L+E S
Sbjct: 708 GDFEQRKRILKEVMIGNEDFNVEVVGDDSPLALMMKDQYANYVIQK-LVEGFDAQS-EEK 765
Query: 390 QRLVTKLQQNLD--SLRFGYGKHVYNFIK 416
+ LV KL+Q L S + YGKH+ + K
Sbjct: 766 KILVVKLRQYLKQISSKNNYGKHLASVEK 794
>gi|23505401|gb|AAN37689.1| pumilio-like mating protein M90 [Phytophthora infestans]
Length = 875
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 152/337 (45%), Gaps = 36/337 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN-E 158
+ L A+D+ GS+++Q+KL D R FN + + ++ + + +V KF+E + E
Sbjct: 537 LFLFAKDQTGSRFIQQKLEKADERVKADAFNEIFPNSLLLMTDVFGNYVIQKFLEYGSLE 596
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
Q L + L ++ L +Q +G I++ ++ L +++ LK +
Sbjct: 597 QQQLLVELMTSNMISLALQV----YGCRVIQRALEVTQVEEQL--ALIRQLKGHVMKCVT 650
Query: 219 TKPGSSVVLQCLE---------------QIYHHNNKNDFIYQAALEHCLYLACHEQGCIN 263
+ G+ V+ +C+E Q + FI + + L+ H GC
Sbjct: 651 DQNGNHVLQKCIEAASWKRAAECKGLRPQRFVTGEDIQFIIDSFVGQAASLSTHSYGCRV 710
Query: 264 MNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHY 323
+ ++ + + +L I L ++ GNYVVQHV+ +P + ++
Sbjct: 711 IQRVLEHCAPNQIRPLLDEIIYKCRDLVKDQFGNYVVQHVISHGEPDQRNIVMQAVLPEI 770
Query: 324 IDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSDQ------IFRVACDKYGNYVIQT 375
S K S VV++CL++ + ++ IV +F+L D+ + + YGNYV+Q
Sbjct: 771 ARWSQHKYASNVVESCLEHATKEEISQIV-DFILQCDESGASCALLPMMKHMYGNYVVQK 829
Query: 376 ALIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
L+E + H R++ ++ N D L RF +GKHV
Sbjct: 830 -LLERADDHDRH---RIICIIRHNEDYLKRFTFGKHV 862
>gi|357143524|ref|XP_003572951.1| PREDICTED: pumilio homolog 4-like [Brachypodium distachyon]
Length = 1010
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 151/321 (47%), Gaps = 22/321 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + +F + ++ + + +V KF E E
Sbjct: 679 VVEFSSDQYGSRFIQQKLETASTEEKNTIFPEILPQARTLMTDVFGNYVIQKFFEYGTEA 738
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++ + +Q S+ +G I+K ++ V + AL+ ++
Sbjct: 739 QKKQLASLLKG---YVLQLSLQMYGCRVIQKALEVVG----VEHQTQMALELDGSIMKCV 791
Query: 220 KP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR-R 276
+ G+ V+ +C+E I + FI A H + L+ H GC + ++ +
Sbjct: 792 RDQNGNHVIQKCIECIPQE--RIQFIISAFYGHVVDLSTHPYGCRVIQRVLEHCDDESTQ 849
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
++ I + L+++ GNYV+QHVL+ P +I L G + +S K S VV
Sbjct: 850 NAMMEEIMQSVVPLTQDQYGNYVIQHVLQYGKPEERTSIITQLAGQIVKMSQQKFASNVV 909
Query: 337 QNCLKY--RITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQR 391
+ CL + ++ E L +D+ + + D++ NYV+Q L ET H +
Sbjct: 910 EKCLSFGSHEERQILINEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDD---HNREL 965
Query: 392 LVTKLQQNLDSL-RFGYGKHV 411
++++++ +L++L R+ YGKH+
Sbjct: 966 ILSRIKVHLNALKRYTYGKHI 986
>gi|345567293|gb|EGX50227.1| hypothetical protein AOL_s00076g302 [Arthrobotrys oligospora ATCC
24927]
Length = 880
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 25/323 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + S D +F+ + Q++ + + +V KF E N+
Sbjct: 515 VVEFSGDQHGSRFIQQKLETATSDEKDVIFSEIRPNALQLMTDVFGNYVIQKFFEHGNQL 574
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q+ ++ S+ +G ++K ++ V ++K + +
Sbjct: 575 QKAMLAKQMEGH---VLKLSLQMYGCRVVQKALEHVLTE--QQATLIKEIDGNVLKCVKD 629
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV + +E++ + DFI +A LA H GC + ++ P + I
Sbjct: 630 QNGNHVVQKAIERVPAQHI--DFILKAFKGQVQSLATHPYGCRVIQRMLEHCDEPAQSSI 687
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L +++ +L ++ GNYV QHV+E P I + H I S K S VV+
Sbjct: 688 LQELNMCLYALIQDQYGNYVTQHVIEHGKPEDRAKIIHVVSQHVIQFSKHKFASNVVEKS 747
Query: 340 LKY-------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALI---ETMRPNSLHLH 389
++Y + + + + D+YGNYVIQ L E R
Sbjct: 748 IQYGNEKQRKEVLGTITAPKSADGPPPLQTLMKDQYGNYVIQKLLFLLDEEDR------- 800
Query: 390 QRLVTKLQQNLDSL-RFGYGKHV 411
L+ ++ L +L RF YGK +
Sbjct: 801 DTLIEAIKPQLANLKRFSYGKQL 823
>gi|162312380|ref|NP_593141.2| RNA-binding protein Puf3 (predicted) [Schizosaccharomyces pombe
972h-]
gi|229891786|sp|O94462.4|PUF3_SCHPO RecName: Full=mRNA-binding protein puf3; AltName: Full=Pumilio
homology domain family member 3
gi|159883910|emb|CAA22616.2| RNA-binding protein Puf3 (predicted) [Schizosaccharomyces pombe]
Length = 732
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 151/341 (44%), Gaps = 32/341 (9%)
Query: 87 FQANPFQHCANSGIL----LLAQDEQGSQYLQEKLTSGDSRFLDKVF-NVVSEFTFQIIC 141
F AN +H S IL L + D+ GS+++Q+KL + + VF + S Q++
Sbjct: 384 FHANKQRHFELSDILGNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTSCLQLMM 443
Query: 142 NQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL 201
+ + +V K+ E NE Q + QI S+ +G ++K ++ ++ P
Sbjct: 444 DIFGNYVVQKYFEFGNEKQKQILLSQIKGH---VFSLSLQMYGCRVVQKAIEYIS--PEH 498
Query: 202 LDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGC 261
+++ L + + G+ V+ + +E I FI +A L+ H GC
Sbjct: 499 QVQLIQELDGHVLDCVCDQNGNHVIQKAIECI--DTGHLQFILRALRPQIHVLSAHPYGC 556
Query: 262 INMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICF 317
+ I+ RK I+ + + L+++ GNYVVQH+L E + Y+ + +
Sbjct: 557 RVIQRAIEHCHS-ERKLIIEELLPHILKLTQDQYGNYVVQHILRTGSESDKKYIFDLMI- 614
Query: 318 SLRGHYIDLSLTKCGSFVVQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNY 371
H + LS K S VV+ C+ Y R +N I+ E N + + DKY NY
Sbjct: 615 ---DHLLFLSCHKFASNVVERCISYISDVDRRRILNKIISEKAENCSILMLMMKDKYANY 671
Query: 372 VIQTALIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
VIQ L + L++ + ++ L +F YGKH+
Sbjct: 672 VIQKLLDASPEEE----RDLLISYIYPHISVLKKFTYGKHL 708
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Query: 233 IYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLI-SVNAASLS 291
++H N + F L + + + + G + + R+ + I S + L
Sbjct: 383 LFHANKQRHFELSDILGNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTSCLQLM 442
Query: 292 RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVE 351
+ GNYVVQ E + + + ++GH LSL G VVQ ++Y I+ + V+
Sbjct: 443 MDIFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEY-ISPEHQVQ 501
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTAL 377
+ CD+ GN+VIQ A+
Sbjct: 502 LIQELDGHVLDCVCDQNGNHVIQKAI 527
>gi|256082282|ref|XP_002577387.1| pumilio [Schistosoma mansoni]
gi|350645489|emb|CCD59841.1| pumilio, putative [Schistosoma mansoni]
Length = 1501
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 150/337 (44%), Gaps = 40/337 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE--TCN 157
++ A+D+ GS+++Q+KL + + + VFN + + +++ + + +V KF E T
Sbjct: 1050 MVEFARDQHGSRFIQQKLETATTAEKNSVFNEILPHSGKLMTDVFGNYVIQKFFEFGTKE 1109
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
+ +LL LQ V+ + +G I+K +++V + ++ L+ +
Sbjct: 1110 QKELLSQRLQ-----GHVVEFATQMYGCRVIQKALESVPAEAKIH--IVGELRPFVTRCV 1162
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +C+E + ++ DFI A + L+ H GC + ++ + +
Sbjct: 1163 KDQNGNHVIQKCIECVPP--SELDFIISAFRGQVVLLSSHPYGCRVIQRILEHCLPEQTR 1220
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
IL + L ++ GNYV+QHVLE I +LRG LS K S V++
Sbjct: 1221 PILDELHKGVEHLVKDQYGNYVIQHVLEHGSNEDKSRIIQNLRGRVCALSSHKFASNVME 1280
Query: 338 NCLKYRITVN--YIVEEFL-------LNSD-----------QIFRVACDKYGNYVIQTAL 377
+ + ++EE L +N D + + D+Y NYV+Q L
Sbjct: 1281 KAIANAVPSERAVLIEEILHPISNVNINGDTSSVTTNNISSSLVDMMKDQYANYVVQRML 1340
Query: 378 IETMRPNSLHLHQR--LVTKLQQNLDSLR-FGYGKHV 411
QR L+ +++ + LR F YGKH+
Sbjct: 1341 ------ELADTEQRRVLINRIRPMQNVLRKFNYGKHI 1371
>gi|150951083|ref|XP_001387330.2| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) [Scheffersomyces stipitis CBS
6054]
gi|149388306|gb|EAZ63307.2| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) [Scheffersomyces stipitis CBS
6054]
Length = 835
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 155/333 (46%), Gaps = 32/333 (9%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+D+ GS+++Q+KL + +FN + + ++ ++ + + +V K+ E + Q
Sbjct: 501 FTKDQHGSRFIQQKLPDASDEEKEVIFNEIRDISYDLMTDVFGNYVIQKYFEHGSTTQKK 560
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM---T 219
+ + + S+ +G +++ ++A+ LD +K ++ L +++
Sbjct: 561 VLLDYMIGH---IYELSLQMYGCRVVQRALEAID-----LDGQIKIIEELRDYILICAKD 612
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ + +E+I ++ FI + +L+ H GC + ++ ++ I
Sbjct: 613 QNGNHVIQKSIERIPF--DRIRFILDSLDNQIYHLSTHPYGCRVIQRLLEYSNVEDQQVI 670
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L ++ L ++ GNYV+QH+LE +P E I + G ++ S K S V++ C
Sbjct: 671 LQELNRFIFYLIQDQYGNYVMQHILERGEPDDREAILKVVLGSVVNFSKHKFASNVIEKC 730
Query: 340 LKYRI--TVNYIVEEFLLNSDQIFRVAC------------DKYGNYVIQTALIETMRPNS 385
+KY I+ E +L ++ F V D+Y NYVIQ L+E NS
Sbjct: 731 IKYGTLSQRKRILREVMLGNED-FNVELVSDESPLALMMKDQYANYVIQK-LVEGFDANS 788
Query: 386 LHLHQRLVTKLQQNLD--SLRFGYGKHVYNFIK 416
+ LV KL+Q L S + YGKH+ + K
Sbjct: 789 -EEKRILVVKLRQYLKQISSKNTYGKHLASVEK 820
>gi|340056635|emb|CCC50971.1| RNA-binding regulatory protein (fragment) [Trypanosoma vivax Y486]
Length = 540
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 130/288 (45%), Gaps = 28/288 (9%)
Query: 95 CANSGILLLAQDEQGSQYLQEKL--TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKF 152
C + A+D+ G ++LQ L + G+S + N + +++ +QYA F+ K
Sbjct: 194 CLRGAVYETAKDQHGCRHLQRLLGDSDGNSEVARVIMNEIVPHVAELMTDQYANFLVQKL 253
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL 212
+ D ++ + ++ G+ S++K+++ ++ R ++++ +AL R
Sbjct: 254 FDIMPPDVRYKVAYVAAPK---IADIALTPHGTFSVQKMIETISTRE-EMEIIREALSRD 309
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
L+ G+ + + L++ H + +FIY A C+ +A ++QGC + ++
Sbjct: 310 VVRLVKDANGNHAIQKVLQRFDHEDK--EFIYAAVGADCVPIAKNKQGCCVLQRCLEYAS 367
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+R ++ I ++ + GNYV+Q+VL+ + I+TI + H L L
Sbjct: 368 PTQRSTLVKHILDCCLQIAEDPYGNYVLQYVLQSGNNTTIDTIAIAFLPH---LPL---- 420
Query: 333 SFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIET 380
V + E + + R+ D +GNYV+QTAL +
Sbjct: 421 -------------VREMYVETMCTPEVAARLIQDDFGNYVLQTALTRS 455
>gi|255566430|ref|XP_002524200.1| pumilio, putative [Ricinus communis]
gi|223536477|gb|EEF38124.1| pumilio, putative [Ricinus communis]
Length = 1011
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 153/332 (46%), Gaps = 34/332 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGK-------- 151
++ + D+ GS+++Q+KL + + + VFN + ++ + + +V K
Sbjct: 668 VVEFSADQYGSRFIQQKLETATTEEKNMVFNEIMPQALSLMTDVFGNYVIQKKNHLSIVL 727
Query: 152 --FIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKAL 209
E + Q+ + Q+ + S+ +G I+K ++ V LD K +
Sbjct: 728 SSVFEHGSAAQIRELADQLIGH---VLTLSLQMYGCRVIQKAIEVVE-----LDQQTKMV 779
Query: 210 KRLFRLLMM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNN 266
L +M + G+ V+ +C+E + + FI + + L+ H GC +
Sbjct: 780 SELDGHIMRCVRDQNGNHVIQKCIECVPE--DAIQFIVSTFYDQVVTLSTHPYGCRVIQR 837
Query: 267 FIDEMKGPRRKQILY-LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYID 325
++ + ++I+ I + L+++ GNYVVQHVLE P+ +I L G +
Sbjct: 838 VLEHCHDAKTQRIMMDEILQSVLMLAQDQYGNYVVQHVLEHGKPHERSSIIKKLTGQIVQ 897
Query: 326 LSLTKCGSFVVQNCLKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIET 380
+S K S V++ CL + +V E L +D+ + + D++ NYV+Q L ET
Sbjct: 898 MSQQKFASNVIEKCLTFGTAAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVL-ET 956
Query: 381 MRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
L L ++ +++ +L++L ++ YGKH+
Sbjct: 957 CDDQQLEL---ILDRIKVHLNALKKYTYGKHI 985
>gi|356538982|ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1049
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 153/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 718 VVEFSADQYGSRFIQQKLETATTEEKNLVYQEIMPHALALMTDVFGNYVVQKFFEHGLAS 777
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD ++ ++ L +M
Sbjct: 778 QRRELANKLHGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRC 829
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + + FI + + L+ H GC + ++ K P
Sbjct: 830 VRDQNGNHVIQKCIECVPE--DAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTT 887
Query: 277 KQILYLISVNAAS-LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+Q + + A S L+++ GNYVVQHVLE P+ +I L + +S K S V
Sbjct: 888 QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELADKIVQMSQQKFASNV 947
Query: 336 VQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L ++D+ + + D++ NYV+Q L ET L
Sbjct: 948 VEKCLTFGGPSERQLLVSEMLGSTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 1004
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++ +++ +L++L ++ YGKH+
Sbjct: 1005 -ILYRIKVHLNALKKYTYGKHI 1025
>gi|213408907|ref|XP_002175224.1| PUF4 [Schizosaccharomyces japonicus yFS275]
gi|212003271|gb|EEB08931.1| PUF4 [Schizosaccharomyces japonicus yFS275]
Length = 846
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 99/193 (51%), Gaps = 10/193 (5%)
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G+ V+ +CL + + K FI+ A E+ + +A H GC + +D ++++ +
Sbjct: 646 GNHVIQKCLHKFS--SEKLQFIFTAMEENIVEIATHRHGCCVLQRSLDRAGEENKRRLAF 703
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
+ NA +L ++ GNYVVQ+V +L + + + GH DLS+ K S ++ C++
Sbjct: 704 KVIANALALVQDPFGNYVVQYVFDLRNDEYNDMLVTQFSGHICDLSMQKFSSNAIEKCIR 763
Query: 342 YRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQN 399
+ ++EE +L S ++ ++ D Y NYVIQ+ L + + QRL+ +
Sbjct: 764 VSTPESCERMLEE-VLQSSRMEKLLKDSYANYVIQSFLTHV----TGEMQQRLLQAINPL 818
Query: 400 LDSLR-FGYGKHV 411
L +R +G+H+
Sbjct: 819 LPKIRNTCHGRHI 831
>gi|297746040|emb|CBI16096.3| unnamed protein product [Vitis vinifera]
Length = 360
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 155/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 30 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGNYVIQKFFEHGLVS 89
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V P D +K ++ L +M
Sbjct: 90 QRRELAGKLYGH---VLTLSLQMYGCRVIQKAIEVV---DP--DQKIKMVEELDGHIMRC 141
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR- 275
+ G+ V+ +C+E + + FI + + L+ H GC + ++ + P+
Sbjct: 142 VRDQNGNHVIQKCIECV--PEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCRDPKT 199
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + + L+++ GNYVVQHVLE P+ I L G + +S K S V
Sbjct: 200 QSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASNV 259
Query: 336 VQNCLKYR--ITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 260 VEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 316
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++++++ +L++L ++ YGKH+
Sbjct: 317 -ILSRIKVHLNALKKYTYGKHI 337
>gi|224059464|ref|XP_002299859.1| predicted protein [Populus trichocarpa]
gi|222847117|gb|EEE84664.1| predicted protein [Populus trichocarpa]
Length = 1065
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 152/326 (46%), Gaps = 32/326 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + V+ + ++ + + +V KF E
Sbjct: 735 VVEFSADQYGSRFIQQKLETATMDEKNVVYEEIMPQALPLMTDVFGNYVIQKFFEHGLPS 794
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + + + S+ +G I+K ++ V LD +K ++ L +M
Sbjct: 795 QRRELAGNLFGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIKMVEELDGHVMRC 846
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E I N + FI + + L+ H GC + ++ K +
Sbjct: 847 VRDQNGNHVIQKCIECIPEDNIQ--FIVSTFFDQVVNLSTHPYGCRVIQRILEHCKDAKT 904
Query: 277 K-----QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
+ +IL +S+ L+++ GNYVVQHVLE + I L G + +S K
Sbjct: 905 ESKVMDEILGAVSM----LAQDQYGNYVVQHVLEHGKSHERSAIIKELAGKIVQMSQQKF 960
Query: 332 GSFVVQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSL 386
S VV+ CL + +V E L +D+ + + D++ NYV+Q L ET
Sbjct: 961 ASNVVEKCLTFSGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQR 1019
Query: 387 HLHQRLVTKLQQNLDSL-RFGYGKHV 411
L ++T+++ +L++L ++ YGKH+
Sbjct: 1020 EL---ILTRIKVHLNALKKYTYGKHI 1042
>gi|5263312|gb|AAD41414.1|AC007727_3 Contains 3 PF|00806 Pumilio-family RNA binding domains (PUF)
[Arabidopsis thaliana]
Length = 252
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
F + I ++ +L + +TS F+ + + GS I+KL+ + L A
Sbjct: 12 FEEMISKLDQRKLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTDDVDALF---AAA 68
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ R F ++ K S VV + + ++ K +A EH L+ A H
Sbjct: 69 ILRRFLHIITDKYASYVVRRGM-TVFDKKKK-----KAMYEHILHYASHI---------- 112
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
R K A LS + GN+V+Q VL+L D I SLRGH++DLS
Sbjct: 113 -----ARDKH--------ALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSF 159
Query: 329 TKCGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPN-SL 386
K GS+VV L+ + ++ +VEE + D + R+A ++YGN+++ AL T +
Sbjct: 160 QKYGSYVVDVLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKEMVRT 219
Query: 387 HLHQRLVTKLQQNLDSLRFGYGKHVYNFI 415
L LV KL+ + LR+ GK++ + +
Sbjct: 220 DLFWGLVHKLKPFHNLLRWSRGKNIASIL 248
>gi|261333325|emb|CBH16320.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 843
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 137/292 (46%), Gaps = 20/292 (6%)
Query: 51 WAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPL---GFQANPFQHCANSGILLLAQDE 107
W + GR T P S + P E + +F+T G H N + AQD+
Sbjct: 384 WGSGAARGRGTAPRES--TQPCSELL--EHFRTDAASGGVSQWRIAHILNHAVEF-AQDQ 438
Query: 108 QGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQ 167
+GS+++Q + S +D +F + E +++ + + +V K +E N QL +
Sbjct: 439 EGSRFIQRAVESATHDEVDALFREIFESPLELVVDVFGNYVLQKLLEVGNARQLAYAATR 498
Query: 168 ITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVL 227
+ + V ++ +G I+K ++ + P LD+++ L+ + + G+ VV
Sbjct: 499 LQNN---VVNLTLQTYGCRVIQKCIEVMP--PEGLDIILSELRGNVAKCIQDQNGNHVVQ 553
Query: 228 QCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVN- 286
+C+E I + FI A + LA H GC + +D P +++ ++ ++
Sbjct: 554 KCVEVI---PQRCGFIVSAFSGRVMELATHAYGCRVIQCIMDHC--PDQEEAIFSELLDC 608
Query: 287 AASLSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
+L+ + GNYV+QHVL+ ++D + I +L+G++ + S K S V++
Sbjct: 609 VGTLATDQYGNYVIQHVLQHMKDDEKVGRIFDALKGNFYESSKQKFASNVME 660
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 170 SQDQ---LFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVV 226
+QDQ F+Q +V+ + L + + P L+LV+ + V
Sbjct: 435 AQDQEGSRFIQRAVESATHDEVDALFREIFESP--LELVVDVF-------------GNYV 479
Query: 227 LQCLEQIYHHNNKNDFIYQAAL--EHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
LQ L ++ N Y A + + L GC + I+ M IL +
Sbjct: 480 LQKLLEV---GNARQLAYAATRLQNNVVNLTLQTYGCRVIQKCIEVMPPEGLDIILSELR 536
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
N A ++ +GN+VVQ +E+ P I + G ++L+ G V+Q + +
Sbjct: 537 GNVAKCIQDQNGNHVVQKCVEV-IPQRCGFIVSAFSGRVMELATHAYGCRVIQCIMDHCP 595
Query: 345 TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ LL D + +A D+YGNYVIQ L
Sbjct: 596 DQEEAIFSELL--DCVGTLATDQYGNYVIQHVL 626
>gi|328767389|gb|EGF77439.1| hypothetical protein BATDEDRAFT_91666 [Batrachochytrium
dendrobatidis JAM81]
Length = 869
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 152/338 (44%), Gaps = 36/338 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE--TCN 157
I+ + D+ GS+++Q+KL + + VF+ + Q++ + + +V K E +
Sbjct: 548 IVEFSGDQHGSRFIQQKLETCTNDEKQLVFDEIMPNALQLMTDVFGNYVIQKIFEYGSAA 607
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL- 216
+ Q+L ++ + ++ S+ +G ++K + V ++ RL L
Sbjct: 608 QKQILAELMEGS-----VLELSLQMYGCRVVQKAFEHVP---------IEQQARLIHELD 653
Query: 217 ------MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
+ + G+ V+ + +E++ + K FI A LA H GC + +
Sbjct: 654 GNVLKCVKDQNGNHVIQKAIERVSAEHIK--FIIDAFHGQVYALATHPYGCRVIQRIFEH 711
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
+ +L + A SL ++ GNYV+QH+LE P + ++G + +S K
Sbjct: 712 CSEEETQPLLGELHRYAISLIQDQYGNYVIQHILERGRPSDKLFVINKVKGQILTMSKHK 771
Query: 331 CGSFVVQNCLKYRITVNY--IVEEFLL----NSDQIFRVACDKYGNYVIQTALIETMRPN 384
S VV+ C+ + + I++E + +F + D++ NYV+Q L P
Sbjct: 772 FASNVVEKCVAFGSPADRQDIIDEVATTKSDGTTALFTMMKDQFANYVVQKMLDVASEPQ 831
Query: 385 SLHLHQRLVTKLQQNLDSL-RFGYGKHVYNFIKDCDLQ 421
+ LVTK++ L SL +F YGKH+ + ++ +Q
Sbjct: 832 KV----MLVTKIKPQLPSLKKFTYGKHLISKVEKLIIQ 865
>gi|452821137|gb|EME28171.1| RNA-binding protein [Galdieria sulphuraria]
Length = 996
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 150/323 (46%), Gaps = 25/323 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQI---ICNQYARFVFGKFIETC 156
I A D+ GS+++Q+KL + L+++ ++V+E I + + + +V K +E
Sbjct: 679 IAEFASDQHGSRFIQQKLEGAN---LEEIRSLVAELGPDIDRLVIDVFGNYVVQKLLEHG 735
Query: 157 NEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
+E+ +T ++ + S+ +G ++K ++ + LV + + + +
Sbjct: 736 DENIRQLLTKKLEGH---MLSLSLHMYGCRVVQKALEVLKGNE-RTQLVQELDGHVLQCI 791
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E + N FI + + LA H GC + ++ +
Sbjct: 792 R-DQNGNHVIQKCIELVEPENIV--FIVDSVKGQAVALAEHAYGCRVVQRVLEHCPKEHK 848
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+IL I A L R+ GNYV+QH++E D I + + + K S VV
Sbjct: 849 AEILAEIMGCARDLIRDQYGNYVIQHIVEKGDADNKAVIMKVVLNEVVAFAQHKFASNVV 908
Query: 337 QNCLKYRITVNYI--VEEFLLNSDQ-----IFRVACDKYGNYVIQTALIETMRPNSLHLH 389
+ CL+Y V + +E + D + + D++GNYV+Q L N HL
Sbjct: 909 ERCLQYGSPVQRMDFIEVLVRGKDSAEDCPLSNLVKDQFGNYVVQRILDVA---NEDHL- 964
Query: 390 QRLVTKLQQNLDSL-RFGYGKHV 411
+R+V+ L++ + L ++ YGKH+
Sbjct: 965 KRVVSILKEQIPYLKKYSYGKHI 987
>gi|71748656|ref|XP_823383.1| pumilio RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833051|gb|EAN78555.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 843
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 137/292 (46%), Gaps = 20/292 (6%)
Query: 51 WAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPL---GFQANPFQHCANSGILLLAQDE 107
W + GR T P S + P E + +F+T G H N + AQD+
Sbjct: 384 WGSGAARGRGTAPRES--TQPCSELL--EHFRTDAASGGVSQWRIAHILNHAVEF-AQDQ 438
Query: 108 QGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQ 167
+GS+++Q + S +D +F + E +++ + + +V K +E N QL +
Sbjct: 439 EGSRFIQRAVESATHDEVDALFREIFESPLELVVDVFGNYVLQKLLEVGNARQLAYAATR 498
Query: 168 ITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVL 227
+ + V ++ +G I+K ++ + P LD+++ L+ + + G+ VV
Sbjct: 499 LQNN---VVNLTLQTYGCRVIQKCIEVMP--PEGLDIILSELRGNVAKCIQDQNGNHVVQ 553
Query: 228 QCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVN- 286
+C+E I + FI A + LA H GC + +D P +++ ++ ++
Sbjct: 554 KCVEVI---PQRCGFIVSAFSGRVMELATHAYGCRVIQCIMDHC--PDQEEAIFSELLDC 608
Query: 287 AASLSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
+L+ + GNYV+QHVL+ ++D + I +L+G++ + S K S V++
Sbjct: 609 VGTLATDQYGNYVIQHVLQHMKDDEKVGRIFDALKGNFYESSKQKFASNVME 660
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 26/213 (12%)
Query: 170 SQDQ---LFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVV 226
+QDQ F+Q +V+ + L + + P L+LV+ + V
Sbjct: 435 AQDQEGSRFIQRAVESATHDEVDALFREIFESP--LELVVDVF-------------GNYV 479
Query: 227 LQCLEQIYHHNNKNDFIYQAAL--EHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
LQ L ++ N Y A + + L GC + I+ M IL +
Sbjct: 480 LQKLLEV---GNARQLAYAATRLQNNVVNLTLQTYGCRVIQKCIEVMPPEGLDIILSELR 536
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
N A ++ +GN+VVQ +E+ P I + G ++L+ G V+Q + +
Sbjct: 537 GNVAKCIQDQNGNHVVQKCVEV-IPQRCGFIVSAFSGRVMELATHAYGCRVIQCIMDHCP 595
Query: 345 TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ LL D + +A D+YGNYVIQ L
Sbjct: 596 DQEEAIFSELL--DCVGTLATDQYGNYVIQHVL 626
>gi|302793089|ref|XP_002978310.1| hypothetical protein SELMODRAFT_107963 [Selaginella moellendorffii]
gi|300154331|gb|EFJ20967.1| hypothetical protein SELMODRAFT_107963 [Selaginella moellendorffii]
Length = 354
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 150/316 (47%), Gaps = 24/316 (7%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL + + VF V ++ + + +V KF E Q +
Sbjct: 8 DQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQQRKELA 67
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKA--VANRPPLLDLVMKALKRLFRLLMMTKPGS 223
Q+ S+ + S+ +G I+K ++ V + L+ + + R R + G+
Sbjct: 68 QQLPSR---VLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVR----DQNGN 120
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ-ILYL 282
V+ +C+E + ++ FI A L L+ H GC + ++ +++Q I+
Sbjct: 121 HVIQKCIECVP--ADRIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQE 178
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I + SL+++ GNYVVQHVLE I L G + +S K S V++ CL++
Sbjct: 179 ILRSTCSLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEKCLQF 238
Query: 343 R--ITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTAL-IETMRPNSLHLHQRLVTKL 396
++ E L ++D+ + + D++ NYV+Q L I R + L+T++
Sbjct: 239 GGPAERQILINEMLGSTDENEALQAMMKDQFANYVVQKVLEICDDRQREI-----LLTRI 293
Query: 397 QQNLDSL-RFGYGKHV 411
+ +L +L ++ YGKH+
Sbjct: 294 KVHLHALKKYTYGKHI 309
>gi|224106433|ref|XP_002314164.1| predicted protein [Populus trichocarpa]
gi|222850572|gb|EEE88119.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 152/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 678 VVEFSADQYGSRFIQQKLETATTDEKNMVYQEIMPQALALMTDVFGNYVIQKFFEHGLPS 737
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V L+ +K ++ L +M
Sbjct: 738 QRRELAGKLLGH---VLTLSLQMYGCRVIQKAIEVVD-----LEHKIKMVEELDGHVMRC 789
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR- 275
+ G+ V+ +C+E I N + FI + + L+ H GC + ++ K +
Sbjct: 790 VRDQNGNHVIQKCIECIPEDNIQ--FIVTTFFDQVVILSTHPYGCRVIQRILEHCKDAKT 847
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + L+++ GNYVVQHVLE + I L G + +S K S V
Sbjct: 848 QSKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQKFASNV 907
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 908 VEKCLTFSGPSERQLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 964
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L +L ++ YGKH+
Sbjct: 965 -ILTRIKVHLTALKKYTYGKHI 985
>gi|213402367|ref|XP_002171956.1| PUF3 [Schizosaccharomyces japonicus yFS275]
gi|212000003|gb|EEB05663.1| PUF3 [Schizosaccharomyces japonicus yFS275]
Length = 840
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 149/323 (46%), Gaps = 24/323 (7%)
Query: 100 ILLLAQDEQGSQYLQEKL-TSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNE 158
+ + D+ GS++LQ+K+ T D ++V+ Q++ + + +V K +E +
Sbjct: 506 LAAFSTDQHGSRFLQQKIETCSDEDRALLFHDIVNGNCLQLMMDVFGNYVVQKLLEFGTD 565
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA-NRPPLLDLVMKALKRLFRLLM 217
+Q T ++ + S+ +G +K ++ + NR ++L+ + + + +
Sbjct: 566 EQREVFTEKMKGH---VLTLSLQMYGCRVAQKALEHIPLNR--QVELIQELDGDVLKCVK 620
Query: 218 MTKPGSSVVLQCLEQI-YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E I Y H F+ A + + L+ H GC + I+ R
Sbjct: 621 -DQNGNHVIQKAIECIPYGHLQ---FVVDAVMPNVYNLSSHPYGCRVIQRIIEHFADARS 676
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
L L L+++ GNYV+QH+++ P I + G+ + LS K S VV
Sbjct: 677 SVYLQL-HTQILHLAQDQYGNYVIQHLMKKGSPSEQREIVEVVLGNVLHLSRHKFASNVV 735
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ C+ Y N ++ E + + DKY NYVIQ LI+ +P L
Sbjct: 736 ERCISYCSDTDRERFFNSLLGENEDGDTYLLNLIKDKYANYVIQ-KLIDVSKPE---LRD 791
Query: 391 RLVTKLQQNLDSLR-FGYGKHVY 412
R++T L +L+ L+ + YGKH+Y
Sbjct: 792 RIITVLNPHLNVLKNYTYGKHLY 814
>gi|219110179|ref|XP_002176841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411376|gb|EEC51304.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 304
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 141/309 (45%), Gaps = 31/309 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I L++D+ G + +Q+ L + + F + + + + ++F K +E
Sbjct: 3 IRRLSRDQVGCRLVQQALDEEGTIAATLILKEGLPFWGEAMVDPFGNYLFQKILEKVTPQ 62
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA----------NRPPLLDLVMKAL 209
+ RI L + S V AS++ G+ S++KL++ A N D++ +L
Sbjct: 63 E--RIML-VKSVSPRLVNASLNLHGTRSVQKLVELCAQDEHNQVVGANEESAADILTYSL 119
Query: 210 KRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFID 269
L + G+ V+ + L ++ + ++K F++ A +A H GC + +D
Sbjct: 120 APAAARLCIDSHGNHVIQRILLKLNYKHSK--FVFDAVALSVGDVARHRHGCCVIQRCLD 177
Query: 270 EMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLT 329
R ++ I + L ++ GNYVVQ+VL++ ++ +C S+ G L++
Sbjct: 178 SQPTEARSHLVLRIVDKSLELMQDAYGNYVVQYVLDVCSDQDVQAVCESVAGRVNLLAIQ 237
Query: 330 KCGSFVVQNCLKY---RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA---------- 376
K S V++ CL+ RI Y+ E + ++I + D +GNYV+Q A
Sbjct: 238 KFSSNVMEKCLERCSDRIKEMYLDE--MSRPERIRELMMDPFGNYVVQRALSVATHTQAI 295
Query: 377 -LIETMRPN 384
L+E MRP+
Sbjct: 296 RLVEAMRPH 304
>gi|62718869|emb|CAG25892.1| Pumilio homolog [Dugesia japonica]
Length = 925
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 154/358 (43%), Gaps = 52/358 (14%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ AQD+ GS+++Q+KL VF + + ++ + + +V +F + +
Sbjct: 554 VVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPQCYSLMTDVFGNYVIQRFFDLGTPE 613
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q+ + +I +Q +Q S+ +G I+K ++ V+ + +++ L+ +
Sbjct: 614 QIQILGDRIRNQ---VLQLSLQMYGCRVIQKALETVSKVTQIN--IVRELEGSVIKCVKD 668
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + DFI A ++ L+ H GC + ++ + I
Sbjct: 669 QNGNHVVQKCVECVPPEHL--DFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPI 726
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + L ++ GNYV+QHVLE I LRG ++LS+ K S VV+
Sbjct: 727 LAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVNLLRGRIVELSIHKFASNVVEKA 786
Query: 340 LKY--RITVNYIVEEFLLN------SDQIFRVA--------------------------- 364
+ + R ++ E L + S+ I R A
Sbjct: 787 VAHATRQERQALINEVLQDSIPVSASNAIMRTADVSGVVYGSETDGSDTDGGGSVQRESV 846
Query: 365 -----CDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFG-YGKHVYNFIK 416
D++ NYVIQ L +P + + L+ K+ +L SLR GKH+ N ++
Sbjct: 847 LYWMMKDQFANYVIQKMLDVAEQP----MRKELMPKINPHLGSLRKSPSGKHIINKME 900
>gi|242781200|ref|XP_002479753.1| mRNA binding protein Pumilio 2, putative [Talaromyces stipitatus
ATCC 10500]
gi|218719900|gb|EED19319.1| mRNA binding protein Pumilio 2, putative [Talaromyces stipitatus
ATCC 10500]
Length = 943
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 145/322 (45%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL S +S D+VF + Q++ + + +V K E N+
Sbjct: 521 IVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 580
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ + + S +G ++K ++ + L D +K L + +M
Sbjct: 581 QKRILANQMKTH---ILALSTQMYGCRVVQKALEHI-----LTDQQAAMVKELDQHVMKC 632
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A + LA H GC + ++ + P R
Sbjct: 633 VRDQNGNHVIQKAIERVPTQHIR--FIIDAFKGNVNKLATHPYGCRVIQRMLEHCETPDR 690
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + V L + GNYV+QHV+E + + S+ + + S K S VV
Sbjct: 691 ESILAELHVCTELLIPDQFGNYVIQHVIENGEEKDRSVMIKSVIKNVHNFSKHKFASNVV 750
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ +++ R + + + + D+YGNYVIQ L + +
Sbjct: 751 EKSIEFGEESQRREIIRLLTAHNDRGESPLLALMRDQYGNYVIQKVLGQVKGSE----RE 806
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++ +++ L L +F YGK +
Sbjct: 807 MIIDEIKPLLSQLKKFSYGKQI 828
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 10/164 (6%)
Query: 220 KPGSSVVLQC--LEQIYHHNNKND-FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+P S V++ LE+ HN N + + H + + + G + ++ +
Sbjct: 487 EPDPSQVVRSPLLEEFRTHNKSNKRYELKDIYNHIVEFSGDQHGSRFIQQKLESANSDEK 546
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
Q+ I N L + GNYVVQ + E + + ++ H + LS G VV
Sbjct: 547 DQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQSQKRILANQMKTHILALSTQMYGCRVV 606
Query: 337 QNCLKYRITVN--YIVEEFLLNSDQ-IFRVACDKYGNYVIQTAL 377
Q L++ +T +V+E DQ + + D+ GN+VIQ A+
Sbjct: 607 QKALEHILTDQQAAMVKEL----DQHVMKCVRDQNGNHVIQKAI 646
>gi|448103094|ref|XP_004199945.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
gi|359381367|emb|CCE81826.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 153/329 (46%), Gaps = 24/329 (7%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+D+ GS+++Q+KL + +FN + + F+++ + + +V K+ E N+ Q
Sbjct: 475 FTKDQHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVIQKYFEHGNDVQ-- 532
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+ L + ++ S+ +G +++ ++A+ + +++ LK + + G
Sbjct: 533 KEVLLDCMKGHIYT-LSMQMYGCRVVQRALEAIKVHQQI--SIIEELKDHILVCAKDQNG 589
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ + +E+I K F+ +A +L+ H GC + ++ +++IL
Sbjct: 590 NHVIQKSIEKIPFKRIK--FVLEALDNQIYHLSTHPYGCRVIQRLLEYSSPDDQRKILDE 647
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
++ L ++ GNYV+QH+LE E I + G ++ S K S V++ C+KY
Sbjct: 648 LNRFIFYLIQDQYGNYVMQHILERGSCEDREEILKVVLGSVVNFSKHKFASNVIEKCIKY 707
Query: 343 -------RITVNYIVE------EFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
RI ++ E + + + + D+Y NYVIQ L+E S
Sbjct: 708 GDFEQRKRILKEVMIGNEDFNVEVVGDDSPLALMMKDQYANYVIQK-LVEGFDAQS-EEK 765
Query: 390 QRLVTKLQQNLD--SLRFGYGKHVYNFIK 416
+ LV KL+Q L S + YGKH+ + K
Sbjct: 766 KILVVKLRQYLKQISSKNNYGKHLASVEK 794
>gi|384494635|gb|EIE85126.1| hypothetical protein RO3G_09836 [Rhizopus delemar RA 99-880]
Length = 680
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 38/329 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + + VF + Q++ + + +V KF E N+
Sbjct: 336 IVEFSGDQHGSRFIQQKLETASREEKEMVFEEILPNALQLMTDVFGNYVLQKFFEHGNQL 395
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q+ + S+ +G I+K ++ V +++ L +
Sbjct: 396 QKAVLARQMEGH---VMSLSLQMYGCRVIQKALEYVLTEQQAC--LIRELDGYVLKCVKD 450
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ + +E++ + + FI A +L+ H GC + ++ G ++ +
Sbjct: 451 QNGNHVIQKAIERVPAQHIR--FIIDAFKGQVYHLSTHPYGCRVIQRVLEYCTGEQKNPL 508
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + SL ++ GNYV+QH+LE +P I + G + S K S VV+ C
Sbjct: 509 LKELDDFIESLIKDQYGNYVIQHILERGEPRDKANIIKKISGRVLSFSKHKFASNVVEKC 568
Query: 340 L---KYRITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQ-----------TALIETMR 382
+ ++I E +D + + D+Y NYV+Q LIET R
Sbjct: 569 VDNGSKEQRQDFIDEVVKCPTDGECPLVLMMKDQYANYVVQRMLEVATEDQRNKLIETTR 628
Query: 383 PNSLHLHQRLVTKLQQNLDSLRFGYGKHV 411
P H L+ K + YGKH+
Sbjct: 629 P-----HLALLKK---------YPYGKHL 643
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 10/164 (6%)
Query: 219 TKPGSSVVLQC--LEQIYHHNNKNDFIYQAALE-HCLYLACHEQGCINMNNFIDEMKGPR 275
+ P + +V + LEQ + KN + Q LE H + + + G + ++
Sbjct: 303 SNPTAGLVTRSPLLEQFRNSKQKNYELIQ--LEGHIVEFSGDQHGSRFIQQKLETASREE 360
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++ + I NA L + GNYV+Q E + + + GH + LSL G V
Sbjct: 361 KEMVFEEILPNALQLMTDVFGNYVLQKFFEHGNQLQKAVLARQMEGHVMSLSLQMYGCRV 420
Query: 336 VQNCLKYRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+Q L+Y +T ++ E + + D+ GN+VIQ A+
Sbjct: 421 IQKALEYVLTEQQACLIREL---DGYVLKCVKDQNGNHVIQKAI 461
>gi|357608364|gb|EHJ65955.1| putative pumilio [Danaus plexippus]
Length = 712
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 137/304 (45%), Gaps = 15/304 (4%)
Query: 112 YLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQ 171
++Q+KL + VFN + + ++ + + +V KF E +Q + TL +
Sbjct: 394 FIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEFGTTEQ--KTTLAQKVR 451
Query: 172 DQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLE 231
+ A + +G I+K ++++ P V++ L + + G+ VV +C+E
Sbjct: 452 GHVLALA-LQMYGCRVIQKALESIP--PEQQQEVVRELDGHVLKCVKDQNGNHVVQKCIE 508
Query: 232 QIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLS 291
+ FI A L+ H GC + ++ + +L + + L
Sbjct: 509 CV--EPAALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTAEQTAPVLAELHAHTDQLI 566
Query: 292 RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYI 349
++ GNYVVQHVLE + +RG + LS K S VV+ C+ + R +
Sbjct: 567 QDQYGNYVVQHVLEHGAAEDRSRLVAGVRGKVLQLSQHKFASNVVEKCVTHATRNERALL 626
Query: 350 VEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGY 407
++E N + + + D+Y NYV+Q +I+ P + L+ K++ ++ SLR + Y
Sbjct: 627 IDELCGFNDNALHVMMKDQYANYVVQK-MIDVAEPTQRKV---LMHKIRPHIGSLRKYTY 682
Query: 408 GKHV 411
GKH+
Sbjct: 683 GKHI 686
>gi|158828286|gb|ABW81162.1| PMpt5-1 [Capsella rubella]
Length = 961
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 147/314 (46%), Gaps = 29/314 (9%)
Query: 109 GSQYLQEKLTSGDSRF-LDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQ 167
GS L+E ++ F L ++ V EF+ +QY + +ET D+ + +
Sbjct: 617 GSSMLEEFKSNKTRGFELSEIAGHVVEFS----SDQYGSRFIQQKLETATTDEKNIVYEE 672
Query: 168 ITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM---TKPGSS 224
I Q + D FG+ I+K ++ V LD +K +K L +M + G+
Sbjct: 673 IMPQALALM---TDVFGNYVIQKAIEVVD-----LDQKIKMVKELDGHVMRCVRDQNGNH 724
Query: 225 VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-RRKQILYLI 283
VV +C+E + N +FI + + L+ H GC + ++ P + +++ I
Sbjct: 725 VVQKCIECVPEENI--EFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHEPDTQSKVMEEI 782
Query: 284 SVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR 343
+ L+++ GNYV+QHVLE P I L G + +S K S VV+ CL +
Sbjct: 783 MTTVSMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFG 842
Query: 344 ITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
+V E L +D+ + + D++ NYV+Q L ET L ++T+++
Sbjct: 843 GPEQRELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL---ILTRIKV 898
Query: 399 NLDSL-RFGYGKHV 411
+L++L ++ YGKH+
Sbjct: 899 HLNALKKYTYGKHI 912
>gi|15219041|ref|NP_173581.1| protein pumilio 20 [Arabidopsis thaliana]
gi|332192006|gb|AEE30127.1| protein pumilio 20 [Arabidopsis thaliana]
Length = 308
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 34/267 (12%)
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
+ I ++ +L + +TS F+ + + GS I+KL+ + L A+
Sbjct: 70 QMISKLDQRKLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTDDVDALF---AAAIL 126
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
R F ++ K S VV + + ++ K +A EH L+ A H
Sbjct: 127 RRFLHIITDKYASYVVRRGM-TVFDKKKK-----KAMYEHILHYASHIA----------- 169
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
R K +A LS + GN+V+Q VL+L D I SLRGH++DLS K
Sbjct: 170 ----RDK--------HALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQK 217
Query: 331 CGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPN-SLHL 388
GS+VV L+ + ++ +VEE + D + R+A ++YGN+++ AL T + L
Sbjct: 218 YGSYVVDVLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKEMVRTDL 277
Query: 389 HQRLVTKLQQNLDSLRFGYGKHVYNFI 415
LV KL+ + LR+ GK++ + +
Sbjct: 278 FWGLVHKLKPFHNLLRWSRGKNIASIL 304
>gi|330933813|ref|XP_003304306.1| hypothetical protein PTT_16851 [Pyrenophora teres f. teres 0-1]
gi|311319138|gb|EFQ87583.1| hypothetical protein PTT_16851 [Pyrenophora teres f. teres 0-1]
Length = 890
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 138/301 (45%), Gaps = 26/301 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ A D+ GS+++Q+KL + +S + VF + E Q++ + + +V KF E ++
Sbjct: 515 VVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQV 574
Query: 160 QLLRITLQITSQ-----DQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR 214
Q + ++ +Q++ V K ++ + A+ L V+K +K
Sbjct: 575 QKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQAAMVKE--LEKDVLKTVK---- 628
Query: 215 LLMMTKPGSSVVLQCLEQI-YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
+ G+ V+ + ++++ H K I +A + L+ + GC + +++++
Sbjct: 629 ----DQNGNHVIQKVIDRVPMQHIQK---IVEAFRGNVGVLSVNSYGCRVIQRLLEKVQE 681
Query: 274 PRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGS 333
P+R+ IL + + L + GNYV QHV+E P I ++ ++ S K S
Sbjct: 682 PQRRFILTELHAEGSKLITDQYGNYVTQHVIEHGLPEDRAKIVSLIKAQFLMFSKHKFAS 741
Query: 334 FVVQNCL------KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLH 387
VV+ CL + R V ++ + + + D YGNYVIQ L++T+ N
Sbjct: 742 NVVERCLICGDDAQRRELVAVVLSKNERGETNVMNLLRDGYGNYVIQK-LLDTLSRNDYE 800
Query: 388 L 388
+
Sbjct: 801 M 801
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 249 EHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELED 308
+H + A + G + ++ ++ + + NA L ++ GNYV+Q E D
Sbjct: 513 DHVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGD 572
Query: 309 PYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKY 368
+ + ++GH ++L+ VVQ L++ +T L D + + D+
Sbjct: 573 QVQKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQAAMVKELEKD-VLKTVKDQN 631
Query: 369 GNYVIQTAL 377
GN+VIQ +
Sbjct: 632 GNHVIQKVI 640
>gi|367049768|ref|XP_003655263.1| hypothetical protein THITE_2118754 [Thielavia terrestris NRRL 8126]
gi|347002527|gb|AEO68927.1| hypothetical protein THITE_2118754 [Thielavia terrestris NRRL 8126]
Length = 916
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 153/326 (46%), Gaps = 32/326 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++QEKL S + D+VF + ++ + + +V KF E + D
Sbjct: 516 VVEFSSDQSGSRFIQEKLESANGDEKDQVFREIEPNAVPLMKDLFGNYVIQKFFE--HGD 573
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR--LLM 217
Q+ + L + + + S+ + ++K ++ V L++ + +K L + +
Sbjct: 574 QIQKKVL-LRAMKGKVMDLSMQMYACRVVQKALENV-----LVEQQAELVKELEADVVKV 627
Query: 218 MTKP-GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
T P G+ VV Q + + + FI A LA + C + ++ +
Sbjct: 628 ATDPHGNHVVQQAIALVPRQH--IGFIIGAFKGRVCELASQQYACRVIQRILEHGTEADK 685
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVL---ELED-PYLIETICFSLRGHYIDLSLTKCG 332
+ + +A +L ++ GNYV+QHVL ED +I+ + L + LS +KC
Sbjct: 686 AAVTQELHKSAETLIKHPYGNYVIQHVLHHGRAEDRSKIIDVVMADL----VALSKSKCA 741
Query: 333 SFVVQNCLKY--RITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ C+ + R I + + + + +F++A D+YGNYV+Q + P H
Sbjct: 742 SNVVEKCIAFGTREEQRAIWDRLVADGEDNCPLFQLAKDQYGNYVVQKLI---ALPVDQH 798
Query: 388 LHQRLVTKLQQNLDSLRF--GYGKHV 411
+ L+ KL+ +L S+R G GK +
Sbjct: 799 -KEALLQKLKAHLQSVRKAPGAGKQM 823
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ G + Q+ I NA L ++ GNYV+Q E D
Sbjct: 515 HVVEFSSDQSGSRFIQEKLESANGDEKDQVFREIEPNAVPLMKDLFGNYVIQKFFEHGDQ 574
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFL-----LNSDQIFRVA 364
+ + +++G +DLS+ VVQ L+ N +VE+ L +D + +VA
Sbjct: 575 IQKKVLLRAMKGKVMDLSMQMYACRVVQKALE-----NVLVEQQAELVKELEAD-VVKVA 628
Query: 365 CDKYGNYVIQTAL 377
D +GN+V+Q A+
Sbjct: 629 TDPHGNHVVQQAI 641
>gi|302765685|ref|XP_002966263.1| hypothetical protein SELMODRAFT_86145 [Selaginella moellendorffii]
gi|300165683|gb|EFJ32290.1| hypothetical protein SELMODRAFT_86145 [Selaginella moellendorffii]
Length = 324
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 150/316 (47%), Gaps = 24/316 (7%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL + + VF V ++ + + +V KF E Q +
Sbjct: 8 DQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQQRKELA 67
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKA--VANRPPLLDLVMKALKRLFRLLMMTKPGS 223
Q+ S+ + S+ +G I+K ++ V + L+ + + R R + G+
Sbjct: 68 QQLPSR---VLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVR----DQNGN 120
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ-ILYL 282
V+ +C+E + ++ FI A L L+ H GC + ++ +++Q I+
Sbjct: 121 HVIQKCIECVP--PDRIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQE 178
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I + SL+++ GNYVVQHVLE I L G + +S K S V++ CL++
Sbjct: 179 ILRSTCSLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEKCLQF 238
Query: 343 R--ITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTAL-IETMRPNSLHLHQRLVTKL 396
++ E L ++D+ + + D++ NYV+Q L I R + L+T++
Sbjct: 239 GGPAERQILINEMLGSTDENEALQAMMKDQFANYVVQKVLEICDDRQREI-----LLTRI 293
Query: 397 QQNLDSL-RFGYGKHV 411
+ +L +L ++ YGKH+
Sbjct: 294 KVHLHALKKYTYGKHI 309
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 260 GCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSL 319
GC + ++ + ++ Q++ + + R+ +GN+V+Q +E P I+ I +
Sbjct: 83 GCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRDQNGNHVIQKCIECVPPDRIQFIICAF 142
Query: 320 RGHYIDLSLTKCGSFVVQNCLKY---RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA 376
G + LS G V+Q L++ I++E L ++ +A D+YGNYV+Q
Sbjct: 143 YGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQEILRST---CSLAQDQYGNYVVQHV 199
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIKDC 418
L +P ++TKL + ++ K N I+ C
Sbjct: 200 LEHGTQPER----SEIITKLAGQI--VQMSQHKFASNVIEKC 235
>gi|48716356|dbj|BAD22967.1| pumilio-like [Oryza sativa Japonica Group]
gi|125541647|gb|EAY88042.1| hypothetical protein OsI_09469 [Oryza sativa Indica Group]
gi|125584167|gb|EAZ25098.1| hypothetical protein OsJ_08892 [Oryza sativa Japonica Group]
Length = 1001
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 149/321 (46%), Gaps = 22/321 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D +F + ++ + + +V KF E E
Sbjct: 672 VVEFSSDQYGSRFIQQKLETASAEEKDTIFPEILPQARTLMTDVFGNYVIQKFFEYGTEP 731
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++ + +Q S+ +G I+K ++ V + AL+ ++
Sbjct: 732 QKKQLASLLKG---YVLQLSLQMYGCRVIQKALEMVE----VEQQTQMALELDGNIMKCV 784
Query: 220 KP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR-R 276
+ G+ V+ +C+E I + FI A H + L+ H GC + ++ +
Sbjct: 785 RDQNGNHVIQKCIECIPQERIR--FIISAFYGHVVELSTHPYGCRVIQRVLEHCNDENTQ 842
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
++ I + L+ + GNYV+QHVL+ P I L G + +S K S VV
Sbjct: 843 STMMEEIMQSVVLLTLDQYGNYVIQHVLQHGKPDERSAIIKQLAGQIVKMSQQKFASNVV 902
Query: 337 QNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQR 391
+ CL + ++ E L +D+ + + D++ NYV+Q L ET + L
Sbjct: 903 EKCLSFGSPEERQILINEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQNREL--- 958
Query: 392 LVTKLQQNLDSL-RFGYGKHV 411
++++++ +L++L R+ YGKH+
Sbjct: 959 ILSRIKVHLNALKRYTYGKHI 979
>gi|225560981|gb|EEH09262.1| pumilio domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 917
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 146/330 (44%), Gaps = 30/330 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q L S +S D+VF + Q++ + + +V K E N+
Sbjct: 498 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 557
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 558 QKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKC 609
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A LA H GC + ++ P R
Sbjct: 610 VKDQNGNHVIQKAVERVPSVHIQ--FIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPDR 667
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+ IL + +SL + GNYV+QHV+ E D I +I S + S K S
Sbjct: 668 RAILEELHACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVIS---QLLVFSKHKFAS 724
Query: 334 FVVQNCLKYRITVNY--IVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLH 387
VV+ +++ I+ + +D+ + + D+YGNYVIQ L + N L
Sbjct: 725 NVVEKSIEFGADDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQL---NGLE 781
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
+ LV K++ L L +F YGK + K
Sbjct: 782 -REALVKKIEPQLTQLKKFSYGKQIAAIEK 810
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
VV L + + N+KN+ Y+ H + + + G + + ++ + Q+
Sbjct: 470 VVRSPLLEEFRTNSKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFRE 529
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I N L + GNYVVQ + E + + + ++GH + LS G VVQ L++
Sbjct: 530 IQPNCLQLMTDVFGNYVVQKLFEHGNQSQKKILANQMKGHILALSTQMYGCRVVQKALEH 589
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 590 ILTDQQASMVKEL---ENHVLKCVKDQNGNHVIQKAV 623
>gi|301620056|ref|XP_002939403.1| PREDICTED: pumilio homolog 1 [Xenopus (Silurana) tropicalis]
Length = 1152
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 146/319 (45%), Gaps = 54/319 (16%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 855 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 914
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + PP ++ + ++ L
Sbjct: 915 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFI---PPDQQVINEMVREL------- 961
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
VL+C++ + + + Q +E C+ P+ Q
Sbjct: 962 ---DGHVLKCVK-----DQNGNHVVQKCIE-----------CVQ----------PQSLQF 992
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ + + + SR+ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 993 I-IDAFKSQVQSRDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1051
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1052 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1107
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1108 HKIRPHIATLRKYTYGKHI 1126
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Query: 270 EMKGPRRKQILYLISVNAA-SLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
E P +Q+++ + AA L + GNYV+Q E + +RGH + L+L
Sbjct: 873 ERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLAL 932
Query: 329 TKCGSFVVQNCLKYRITVNYIVEEFLLNSD-QIFRVACDKYGNYVIQTALIETMRPNSLH 387
G V+Q L++ ++ E + D + + D+ GN+V+Q IE ++P SL
Sbjct: 933 QMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSL- 990
Query: 388 LHQRLVTKLQQNLDSLRFGYGKHVYNFI 415
Q ++ + + S R YG +V +
Sbjct: 991 --QFIIDAFKSQVQS-RDQYGNYVIQHV 1015
>gi|242063522|ref|XP_002453050.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
gi|241932881|gb|EES06026.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
Length = 998
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 152/320 (47%), Gaps = 20/320 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + +F + ++ + + +V KF E E
Sbjct: 670 VVEFSSDQYGSRFIQQKLETASIEEKNMIFPEILPQARTLMTDVFGNYVIQKFFEYGTET 729
Query: 160 QLLRITLQITSQDQLFV-QASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
Q T Q+ + + +V Q S+ +G I+K ++ V + ++ + R +
Sbjct: 730 Q----TKQLATLLKGYVLQLSLQMYGCRVIQKALEVVEVEQ-QTQMALELDGSIMRCVR- 783
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR-RK 277
+ G+ V+ +C+E I + FI A H + L+ H GC + ++ +
Sbjct: 784 DQNGNHVIQKCIECIPQERIR--FIISAFYGHVVELSMHPYGCRVIQRVLEHCDDESTQN 841
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
++ I + +L+ + GNYV+QHVL+ P TI L G + +S K S VV+
Sbjct: 842 AMMEEIMQSVVTLTEDQYGNYVIQHVLQHGKPEERSTIITQLAGQIVKMSQQKFASNVVE 901
Query: 338 NCLKYR--ITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
CL + ++ E L +D+ + + D++ NYV+Q L E + L +
Sbjct: 902 KCLTFGNPEQRQILINEMLGTTDENEPLQAMMKDQFANYVVQKVL-EICDDQNREL---I 957
Query: 393 VTKLQQNLDSL-RFGYGKHV 411
+++++ +L++L R+ YGKH+
Sbjct: 958 LSRIKVHLNALKRYTYGKHI 977
>gi|367028016|ref|XP_003663292.1| hypothetical protein MYCTH_2305032 [Myceliophthora thermophila ATCC
42464]
gi|347010561|gb|AEO58047.1| hypothetical protein MYCTH_2305032 [Myceliophthora thermophila ATCC
42464]
Length = 891
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 146/312 (46%), Gaps = 21/312 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+Q S+++Q+KL + +S D+VF + + Q++ + + +V K E D
Sbjct: 498 IVEFSGDQQASRFIQQKLETANSDERDQVFAEIEKNAIQLMKDVFGNYVMQKLFEYG--D 555
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL-FRLLMM 218
Q+ + L + ++ V S+ + ++K ++ V L++ + +K L LL +
Sbjct: 556 QVQKKVLASAMKGKV-VDLSMQPYACRVVQKALEHV-----LVEQQTELVKELESDLLKV 609
Query: 219 TKP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
K G+ V+ Q + + + DFI LA H+ GC + ++ +
Sbjct: 610 AKDQHGNHVIQQAIVLVPREHI--DFIMTGFKGRVYELASHQFGCRVIQRILEHGTEADK 667
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
++ + +A SL + GNYV+QHVLE P + + + LS K S VV
Sbjct: 668 AALMVELHNSAQSLVTDMYGNYVIQHVLEKGRPEDRAKMIGVVTPQLLMLSRHKNASNVV 727
Query: 337 QNCLKYRITVN-YIVEEFLLNSD---QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
+ C+ + + L+ + +F++ D++GNYVIQ L++ ++ + L
Sbjct: 728 EKCIMLGTPEEQRAIRDKLMGEEPNSPLFQLMKDQFGNYVIQK-LVKALQGQDRMV---L 783
Query: 393 VTKLQQNLDSLR 404
V KL +L SLR
Sbjct: 784 VNKLASHLQSLR 795
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 5/167 (2%)
Query: 214 RLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
R + PG+S L + H + + H + + +Q + ++
Sbjct: 461 RPMRDQAPGNSFRSALLHEFKHSPKSKRWELKDIWGHIVEFSGDQQASRFIQQKLETANS 520
Query: 274 PRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGS 333
R Q+ I NA L ++ GNYV+Q + E D + + +++G +DLS+
Sbjct: 521 DERDQVFAEIEKNAIQLMKDVFGNYVMQKLFEYGDQVQKKVLASAMKGKVVDLSMQPYAC 580
Query: 334 FVVQNCLKYRITV--NYIVEEFLLNSDQIFRVACDKYGNYVIQTALI 378
VVQ L++ + +V+E L SD + +VA D++GN+VIQ A++
Sbjct: 581 RVVQKALEHVLVEQQTELVKE--LESD-LLKVAKDQHGNHVIQQAIV 624
>gi|320586016|gb|EFW98695.1| pumilio family mRNA-binding protein [Grosmannia clavigera kw1407]
Length = 953
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 133/287 (46%), Gaps = 19/287 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q KL + +S + VF +S T ++ + + +V KF E ++
Sbjct: 543 IVEFSGDQHGSRFIQSKLETANSDEKEHVFREISANTLVLMQDVFGNYVVQKFFEHGSQL 602
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD---LVMKALKRLFRLL 216
Q + Q+ + V S + ++K ++ + L+D ++ K L+ + +
Sbjct: 603 QKKYLAEQMRGK---IVDLSTQTYACRVVQKALQHI-----LVDQQVILAKELE-IDVIR 653
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
++ P + V+Q + ++ + N FI A L+ H GC + ++ +
Sbjct: 654 VVKDPNGNHVIQKVVELVPREHIN-FIIDAFRGRVRELSAHNYGCRVIQRMLEHGLEEDK 712
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + NA L + GNYV QHV++ P E + + + +S K S VV
Sbjct: 713 EMILSELHDNAMDLINDQYGNYVAQHVIQFGKPRDREKVISRVLNQLVTMSNNKFASNVV 772
Query: 337 QNCLKYRITVN--YIVEEF-LLNSDQ---IFRVACDKYGNYVIQTAL 377
+ C+++ + I EE L D + ++ D+YGNYVIQ L
Sbjct: 773 EKCIEFGTAADRQRIREELSRLGPDGQPILQQMIKDQYGNYVIQKLL 819
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 249 EHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQ----HVL 304
+H + + + G + + ++ ++ + IS N L ++ GNYVVQ H
Sbjct: 541 DHIVEFSGDQHGSRFIQSKLETANSDEKEHVFREISANTLVLMQDVFGNYVVQKFFEHGS 600
Query: 305 ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVA 364
+L+ YL E +RG +DLS VVQ L++ + ++ L D + RV
Sbjct: 601 QLQKKYLAE----QMRGKIVDLSTQTYACRVVQKALQHILVDQQVILAKELEID-VIRVV 655
Query: 365 CDKYGNYVIQ 374
D GN+VIQ
Sbjct: 656 KDPNGNHVIQ 665
>gi|341874392|gb|EGT30327.1| CBN-PUF-9 protein [Caenorhabditis brenneri]
Length = 688
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 158/333 (47%), Gaps = 26/333 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ A+D+ GS+++Q+KL SR +F V E +++ + + +V KF E N D
Sbjct: 336 VIEFAKDQHGSRFIQQKLERASSRDKAAIFTPVLEHAEELMTDVFGNYVIQKFFEYGNND 395
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++ I ++ ++ +G I+K ++ V + ++ ++ +
Sbjct: 396 QRNQLVATIRGN---VMKLALQMYGCRVIQKALEYVEEK--YQHEILGEMEGQVLKCVKD 450
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAAL----EHCLYLACHEQGCINMNNFIDEMKGPR 275
+ G+ V+ + +E++ ++ FI A ++ L+ H GC + ++ +
Sbjct: 451 QNGNHVIQKVIERV--EPDRLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNDEQ 508
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFS-LRGHYIDLSLTKCGSF 334
++ +L ++++ L + GNYV+QHV+E E I + + + K S
Sbjct: 509 KQPVLDALNLHLKQLVLDQYGNYVIQHVIEHGSAKDKEQIVKDVINDDLLKFAQHKFASN 568
Query: 335 VVQNCLKY--RITVNYIVEEFLLN----SDQIFRVACDKYGNYVIQTALIETMRPNSLHL 388
V++ CL + + N I+++ + S + + D + NYV+Q +++ P
Sbjct: 569 VIEKCLSFGSQEDRNLIIDKVCGDPNDASPPLLLMMKDPFANYVVQK-MLDVADPQ---- 623
Query: 389 HQRLVT-KLQQNLDSLR-FGYGKHVY-NFIKDC 418
H++ +T ++ ++ +LR + +GKH+ +I+DC
Sbjct: 624 HRKKITLTIKPHIATLRKYNFGKHILRKYIRDC 656
>gi|189195550|ref|XP_001934113.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979992|gb|EDU46618.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 891
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 137/301 (45%), Gaps = 26/301 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ A D+ GS+++Q+KL + +S + VF + E Q++ + + +V KF E ++
Sbjct: 516 VVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQV 575
Query: 160 QLLRITLQITSQ-----DQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR 214
Q + ++ +Q++ V K ++ + A+ L V+K +K
Sbjct: 576 QKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQAAMVKE--LEKDVLKTVK---- 629
Query: 215 LLMMTKPGSSVVLQCLEQI-YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
+ G+ V+ + ++++ H K I +A + L+ + GC + +++++
Sbjct: 630 ----DQNGNHVIQKVIDRVPMQHIQK---IVEAFRGNVGVLSVNSYGCRVIQRLLEKVQE 682
Query: 274 PRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGS 333
P+R+ IL + L + GNYV QHV+E P I ++ ++ S K S
Sbjct: 683 PQRRFILTELHAEGPKLITDQYGNYVTQHVIEHGLPEDRAKIVSLIKAQFLMFSKHKFAS 742
Query: 334 FVVQNCL------KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLH 387
VV+ CL + R V ++ + + + D YGNYVIQ L++T+ N
Sbjct: 743 NVVERCLICGDDAQRRQLVAVVLSKNERGETNVMNLLRDGYGNYVIQK-LLDTLGRNDYE 801
Query: 388 L 388
+
Sbjct: 802 M 802
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 249 EHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELED 308
+H + A + G + ++ ++ + + NA L ++ GNYV+Q E D
Sbjct: 514 DHVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGD 573
Query: 309 PYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKY 368
+ + ++GH ++L+ VVQ L++ +T L D + + D+
Sbjct: 574 QVQKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQAAMVKELEKD-VLKTVKDQN 632
Query: 369 GNYVIQTAL 377
GN+VIQ +
Sbjct: 633 GNHVIQKVI 641
>gi|158828185|gb|ABW81064.1| AlMpt5-2 [Arabidopsis lyrata subsp. lyrata]
Length = 949
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 147/314 (46%), Gaps = 29/314 (9%)
Query: 109 GSQYLQEKLTSGDSRF-LDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQ 167
GS L+E ++ F L ++ V EF+ +QY + +ET D+ + +
Sbjct: 617 GSSMLEEFKSNKTRGFELSEIAGHVVEFS----SDQYGSRFIQQKLETATTDEKNMVYEE 672
Query: 168 ITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM---TKPGSS 224
I Q + D FG+ I+K ++ V LD +K +K L +M + G+
Sbjct: 673 IMPQALALM---TDVFGNYVIQKAIEVVD-----LDQKIKMVKELDGHVMRCVRDQNGNH 724
Query: 225 VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-RRKQILYLI 283
VV +C+E + N +FI + + L+ H GC + ++ P + +++ I
Sbjct: 725 VVQKCIECVPEENI--EFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEI 782
Query: 284 SVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR 343
+ L+++ GNYV+QHVLE P I L G + +S K S VV+ CL +
Sbjct: 783 MSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFG 842
Query: 344 I--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
++V E L +D+ + + D++ NYV+Q L ET L ++ +++
Sbjct: 843 GPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL---ILGRIKV 898
Query: 399 NLDSL-RFGYGKHV 411
+L++L ++ YGKH+
Sbjct: 899 HLNALKKYTYGKHI 912
>gi|325096471|gb|EGC49781.1| pumilio [Ajellomyces capsulatus H88]
Length = 876
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 30/325 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q L S +S D+VF + Q++ + + +V K E N+
Sbjct: 457 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 516
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 517 QKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKC 568
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A LA H GC + ++ P R
Sbjct: 569 VKDQNGNHVIQKAVERVPSVHIQ--FIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPDR 626
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+ +L + +SL + GNYV+QHV+ E D I +I S + S K S
Sbjct: 627 RAVLEELHACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVIS---QLLVFSKHKFAS 683
Query: 334 FVVQNCLKYRITVNY--IVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLH 387
VV+ +++ I+ + +D+ + + D+YGNYVIQ L + N L
Sbjct: 684 NVVEKSIEFGADDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQL---NGLE 740
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHV 411
+ LV K++ L L +F YGK +
Sbjct: 741 -REALVKKIEPQLTQLKKFSYGKQI 764
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
VV L + + NNKN+ Y+ H + + + G + + ++ + Q+
Sbjct: 429 VVRSPLLEEFRTNNKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFRE 488
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I N L + GNYVVQ + E + + + ++GH + LS G VVQ L++
Sbjct: 489 IQPNCLQLMTDVFGNYVVQKLFEHGNQSQKKILANQMKGHILALSTQMYGCRVVQKALEH 548
Query: 343 RITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 549 ILTDQQASMVKEL---ENHVLKCVKDQNGNHVIQKAV 582
>gi|410075265|ref|XP_003955215.1| hypothetical protein KAFR_0A06450 [Kazachstania africana CBS 2517]
gi|372461797|emb|CCF56080.1| hypothetical protein KAFR_0A06450 [Kazachstania africana CBS 2517]
Length = 493
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 159/344 (46%), Gaps = 26/344 (7%)
Query: 67 GTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLD 126
G S + + +S ++Q L + ++ N I+ LA D Q + LQ L + +D
Sbjct: 131 GHSGNKAKKRSSCDYQEFLQNGKSSYKFDKNE-IINLATDYQTCKILQSYLDKLNRHEID 189
Query: 127 KVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSS 186
++ ++ + +I N Y + K I + + + + + I Q F + D G+
Sbjct: 190 VIYKIIEKDIIGLILNSYGNYFIQKLIISVSLENRVNLLKTIAGQ---FNSIATDIHGTR 246
Query: 187 SIRKLMKAVAN---RPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFI 243
I+ L+ V + ++ L+ L + P S+ ++Q + + I
Sbjct: 247 VIQSLVDCVETIQEQEQIIKLIDNDLIQFCH-----DPNSNHIIQKILAKFDPEALIG-I 300
Query: 244 YQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHV 303
YQ L++C+ ++ + GC + ID + ++ I NA SLS + GNYV+Q++
Sbjct: 301 YQIMLQNCISISKDKFGCCIIQRCIDYGTSNQVATLIGHIVKNAESLSFDAYGNYVIQYI 360
Query: 304 LELED-----PYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNS- 357
+++E Y + I +L+G +S K S +++ LK + I++EFL
Sbjct: 361 IKMEQNIYSCKYTFD-ILNNLKGKLTTISNHKFSSNIIELLLKNPNVADVIIKEFLSYGA 419
Query: 358 -----DQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ I + DKYGNYV+QTAL + R N++ L+ +LV K+
Sbjct: 420 KGNTFNSINVLLNDKYGNYVLQTALASS-RQNNILLYNQLVNKI 462
>gi|402083794|gb|EJT78812.1| hypothetical protein GGTG_03909 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 911
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 148/317 (46%), Gaps = 29/317 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+QGS+++Q KL S +S D+VF + Q++ + + +V KF E N+
Sbjct: 516 VVEFSGDQQGSRFIQTKLESANSDEKDQVFREIEPNAVQLMKDLFGNYVIQKFFEHGNQV 575
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR---LL 216
+ Q+ ++ V S + ++K ++ V L++ + +K L +
Sbjct: 576 HKKILAGQMKNR---MVDLSTQMYACRVVQKALEHV-----LVEQQAELVKELEHHTLSI 627
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
M + G+ V+ + +E + + FIY+A H L+ GC + +++ G
Sbjct: 628 MQNQNGNHVIQKIVELLPRQH--IGFIYEAVRGHLKELSTQTYGCRVVQRMLEQ--GTEE 683
Query: 277 KQILYLISVNAA--SLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
++ + + A+ +L + GNYVVQH++ P ++ + S K S
Sbjct: 684 DTVVMMDEIYASMTALITDQYGNYVVQHIITNGSPADQRRTIDAVMAQVVQFSKHKYASN 743
Query: 335 VVQNCLKYRITVNYI-VEEFLLNS-----DQIFRVACDKYGNYVIQTALIETMR-PNSLH 387
+V+ C+ + + + E L+ + + I ++ D+YGNYVIQ L++T++ P +
Sbjct: 744 IVEKCIVHGTAEDRTKISEILIRTGADGINPIHQLMKDQYGNYVIQK-LVDTLQEPEKTN 802
Query: 388 LHQRLVTKLQQNLDSLR 404
V K++ +SL+
Sbjct: 803 ----FVMKMKPQFNSLK 815
>gi|268562677|ref|XP_002646736.1| Hypothetical protein CBG13130 [Caenorhabditis briggsae]
Length = 514
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 168/376 (44%), Gaps = 50/376 (13%)
Query: 63 PNLSGT-SNPQYETITSSNFQTPLGFQANP-----FQHCANSGILL-LAQDEQGSQYLQE 115
PN +G +N ET TS + T F++NP + G+LL A+D+ GS+++Q+
Sbjct: 141 PNATGVFANTNRETATSDDLLT--RFRSNPSMMKGLKLSDVRGMLLKFAKDQVGSRFIQQ 198
Query: 116 KLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLF 175
KL D D +F+ V + +++ + + +V KF E E R+
Sbjct: 199 KLEFCDINEKDAIFDEVVDNAAELVDDIFGNYVVQKFFEYGEEKHWTRL----------- 247
Query: 176 VQASVDK-----FGSSSIRKLMKAVAN-RPPLLDLVMKALKRLFRLLMMTKPGSSVVLQC 229
V A VD+ F + R L KA+ PL ++ ++ + M + G+ V+ +
Sbjct: 248 VDAVVDRVPEYAFQMYACRVLQKALEKVNEPLQIKILSQIRHVIHRCMKDQNGNHVIQKA 307
Query: 230 LEQIYHHNNKNDFIYQAALE---HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVN 286
+E++ + FI +E + ++ GC + ++ + + I+ I
Sbjct: 308 IEKVSPQYIQ--FIVNTLMENPDNIFDMSVDPYGCRVVQRCLEHCIASQTRPIIERIHER 365
Query: 287 AASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR 343
++ N GNYVVQHV+ D LI T + + D + K S V++ CL+ R
Sbjct: 366 FDDIANNQYGNYVVQHVILHGTEADRLLIVT---RVSENLFDFASHKYSSNVIEKCLE-R 421
Query: 344 ITV---NYIVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
++ N IV D + ++ D+Y NYV+Q + E + P + L+ +
Sbjct: 422 GSIHHKNIIVRAACSQPDGTMPIVVQMMKDQYANYVVQK-MFEQVTPEQ---RRELILTV 477
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ LR F +GKH+
Sbjct: 478 RSHIPILRQFAHGKHI 493
>gi|196010159|ref|XP_002114944.1| hypothetical protein TRIADDRAFT_28798 [Trichoplax adhaerens]
gi|190582327|gb|EDV22400.1| hypothetical protein TRIADDRAFT_28798 [Trichoplax adhaerens]
Length = 488
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 146/327 (44%), Gaps = 31/327 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VFN + + ++ + + +V KF E + +
Sbjct: 147 IVEFSQDQHGSRFIQQKLERATTAEKQLVFNEIINSAYDLMTDVFGNYVIQKFFEFGSSE 206
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDL--VMKALKRLFRLLM 217
Q + ++ + ++ +G I+K ++++ P+ V+K L +
Sbjct: 207 QKQLLAERVKGH---VLPLALQMYGCRVIQKALESI----PVEQQTEVVKELDGHVLKCV 259
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ VV +C+E + + FI A + L+ H GC + ++ + +
Sbjct: 260 KDQNGNHVVQKCIECV--SPSALQFIINAFKKQVFSLSTHPYGCRVIQRILEHCTPEQTE 317
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLE---LEDPYLIETICFSLRGHYIDLSLTKCGSF 334
IL + L + GNYV+QHVLE LED I L G ++LS K S
Sbjct: 318 PILDELHEATEQLVLDQYGNYVIQHVLEHGRLEDK---SKIISKLTGKIVELSQHKFASN 374
Query: 335 VVQNCLKYRITVNY--IVEEFL-------LNSDQIFRVACDKYGNYVIQTALIETMRPNS 385
V++ C+ + +VEE N+ ++ + D++ NYVIQ + P
Sbjct: 375 VIEKCVSHSTKAERALLVEEVCSSHSDSNQNNSGLYTMMKDQFANYVIQKMIDMADSPQ- 433
Query: 386 LHLHQRLVTKLQQNLDSLR-FGYGKHV 411
+ L+ K++ LR + YGKH+
Sbjct: 434 ---RKILIQKIRPFTGVLRKYTYGKHI 457
>gi|302142233|emb|CBI19436.3| unnamed protein product [Vitis vinifera]
Length = 167
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 242 FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQ 301
++ + E+C +A + GC + + ++ +G R+Q++ I NA L+ + GNYVVQ
Sbjct: 12 YLIKEVAENCFEIATNRSGCCVLQSCVENSQGELREQLMAEIIANALPLAEDRYGNYVVQ 71
Query: 302 HVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL---KYRITVNYIVEEFLLNSD 358
H++ L+ P +I + G +I LS K GS VV+ L K + I+E LL S
Sbjct: 72 HLMGLKIPEVITNLLKQFEGTFISLSCNKYGSNVVEKFLIESKDEQSSQIIIE--LLRSP 129
Query: 359 QIFRVACDKYGNYVIQTAL 377
+ + D +GN+VIQ+AL
Sbjct: 130 NVSMLLLDPFGNFVIQSAL 148
>gi|344305475|gb|EGW35707.1| hypothetical protein SPAPADRAFT_58907 [Spathaspora passalidarum
NRRL Y-27907]
Length = 546
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 149/326 (45%), Gaps = 26/326 (7%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+D+ GS+++Q+KL S VFN + + ++ ++ + + +V K+ E +DQ
Sbjct: 214 FTKDQYGSRFIQQKLNSSSDEEKATVFNEIKDISYDLMTDVFGNYVIQKYFEYGLKDQK- 272
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+T + S+ +G +++ +++++ P ++ LK + + G
Sbjct: 273 --EFLLTKMKGHIYELSLQMYGCRVVQRALESLS--LPGQLAIIDELKDYILICAKDQNG 328
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ + +E I +K FI + + L+ H GC + ++ +K IL
Sbjct: 329 NHVIQKSIEMIKPF-DKIRFILTSLSDQIYQLSIHPYGCRVIQRLLEFSNLDDQKDILEQ 387
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
++ L ++ GNYV+QH+LE + I + G + S K S V++ C+K+
Sbjct: 388 LNRYIFYLIQDQYGNYVIQHILEHGNENERNEILKVVTGSVVTFSKHKFASNVIEKCIKF 447
Query: 343 RITV--NYIVEEFLLNSDQ-----------IFRVACDKYGNYVIQTALIETMRPNSLHLH 389
T I++E ++ ++ + + D+Y NYVIQ L+E S
Sbjct: 448 GSTAQKRKILDEVMIGNEDFSMELVSDDSSLALMMKDQYANYVIQ-KLVEGFDSKSPE-K 505
Query: 390 QRLVTKLQQNLDSL----RFGYGKHV 411
+RLV KL+Q L + +G GKH+
Sbjct: 506 KRLVLKLRQYLKQISNKNNYG-GKHL 530
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 8/167 (4%)
Query: 221 PGSSVVLQC--LEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
PG + + + LE+I + +F + H + + G + ++ +
Sbjct: 179 PGGNHIYRSPLLEEIRANPKDKEFFLKDIYGHAVEFTKDQYGSRFIQQKLNSSSDEEKAT 238
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ I + L + GNYV+Q E E + ++GH +LSL G VVQ
Sbjct: 239 VFNEIKDISYDLMTDVFGNYVIQKYFEYGLKDQKEFLLTKMKGHIYELSLQMYGCRVVQR 298
Query: 339 CLKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRP 383
L+ I++E D I A D+ GN+VIQ + IE ++P
Sbjct: 299 ALESLSLPGQLAIIDEL---KDYILICAKDQNGNHVIQKS-IEMIKP 341
>gi|123432416|ref|XP_001308417.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121890096|gb|EAX95487.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 399
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 139/314 (44%), Gaps = 27/314 (8%)
Query: 71 PQYET--ITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKV 128
P+ +T I +NF +P Q ++ A+D S+ LQ+K+T + LD +
Sbjct: 58 PKLDTPLIPDNNFVSP--------QQQQQRSYVMQARDPMKSRSLQKKMTECSKQELDII 109
Query: 129 FNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSI 188
FN + +++ +Q A FV K ET E+Q + S V S+ +
Sbjct: 110 FNSLYPSLNELVFDQSANFVIQKLCETATEEQQQKFLKFFLSDLNNIVDHSI------AC 163
Query: 189 RKLMKAV-ANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAA 247
R L + + + ++ + ALK L +++ G+ +V + + + +K + I A
Sbjct: 164 RVLQRFIETTQKENIEKLFNALKPNLMSLCLSQNGNHIVQRFVMSL---PSKLNVIIDAI 220
Query: 248 LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELE 307
L + LA GC + D+ K + + I+ + NA L+ N GNYVVQ++L
Sbjct: 221 LPSVVPLAIDNCGCRIVQRLFDQYKIEQLESIVAEVMRNAVELATNQYGNYVVQYILASN 280
Query: 308 DPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL-------KYRITVNYIVEEFLLNSDQI 360
I + + +G + SL K S V++ C+ + I I N+ +I
Sbjct: 281 KHEHISNLLKAFKGRFYQFSLHKFASNVIEKCIRGASEEERMEIFPEIIGSAPDFNATRI 340
Query: 361 FRVACDKYGNYVIQ 374
+ D++GNYVIQ
Sbjct: 341 STMVEDQFGNYVIQ 354
>gi|440300551|gb|ELP92998.1| pumilio, putative [Entamoeba invadens IP1]
Length = 427
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 162/363 (44%), Gaps = 23/363 (6%)
Query: 32 SSFNEIHPSPPVPLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQ----TPLGF 87
+S + + S + L+ S ++ S + P LS S+ ITSS Q TP F
Sbjct: 42 ASLQKPYSSDDIFLFMNSDNSMFSFLHQKQPPTLSHRSSDATILITSSRLQDLVNTPPSF 101
Query: 88 QANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARF 147
Q + ++ L +D+QGS+ +Q+ + + L ++F ++ + + + +
Sbjct: 102 QKKNVKGKPHN-FQTLCKDQQGSRKIQQFIEAATDDELSQIFIIIQPAILDLTIDLFGNY 160
Query: 148 VFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMK 207
V K +E ++ + QI+ V+ S++ +G I+K++ + + L V
Sbjct: 161 VVQKLLEYGPPKLIVDVFKQISGS---IVRLSLNTYGCRVIQKMLDVLPS--SCLQDVAD 215
Query: 208 ALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNF 267
+K L + + G+ V+ + ++ I FI + E + + H GC +
Sbjct: 216 EMKSNVVLFIEDQNGNHVIQKFIDAIPEIGL--GFIIKEIKEKVVDFSKHAYGCRVVQRL 273
Query: 268 IDEMKG-PRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
I++ P +++ N LS N GNYV+QH+++ + I +++G +
Sbjct: 274 IEKAAFLPIAGKLIE----NVWDLSVNQYGNYVIQHLVQHGNNSQRVAIVKNIKGKLYEY 329
Query: 327 SLTKCGSFVVQNCLK--YRITVNYIVEEFLL---NSDQIFRVACDKYGNYVIQTALIETM 381
++ K S VV+ CL+ N V+E + D++ + CD Y NYV+Q ++E M
Sbjct: 330 AMKKYSSNVVEKCLRCCEEKEQNVFVDELFRMEGDGDKVKEMVCDAYANYVVQR-IVEMM 388
Query: 382 RPN 384
N
Sbjct: 389 TDN 391
>gi|387594744|gb|EIJ89768.1| hypothetical protein NEQG_00538 [Nematocida parisii ERTm3]
gi|387596408|gb|EIJ94029.1| hypothetical protein NEPG_00694 [Nematocida parisii ERTm1]
Length = 461
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 145/321 (45%), Gaps = 28/321 (8%)
Query: 66 SGTSN-PQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRF 124
SG+S PQ E F+ L F + + I +++D++GS+++Q+KL S
Sbjct: 117 SGSSEEPQKEQF----FEEVLAFAKKRGITSSENLICAISKDQEGSRFIQKKLDSATIEE 172
Query: 125 LDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFG 184
+D F + + ++I + + +V KF+E +Q +I + S + ++ +G
Sbjct: 173 IDITFEEICPWISELIVDLFGNYVVQKFLEIGTTEQREKIFFAMES---TIISLALHMYG 229
Query: 185 SSSIRKLMKAV-ANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFI 243
I+K ++ NR +++ +K L+ + G+ VV +C+E + +DF+
Sbjct: 230 CRVIQKALECKDINRK-----IVEKIKGHVIDLVCDQNGNHVVQKCVECV-----DSDFV 279
Query: 244 YQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHV 303
+ E + L+ H GC + + + + I NA L + GNYV+QH+
Sbjct: 280 IKEFEEDAVSLSRHRYGCRVIQRIFE--NSTKCASAIDKIISNAKLLVEDQYGNYVIQHI 337
Query: 304 LELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YIVEEFL-----LN 356
LE I L + + S+ K S V++ C+ + + Y++++
Sbjct: 338 LEKGTHAHKRKIITELSDNIAEYSIHKFASNVMEKCVICGTSEDRRYMLKQLKSAVGPAG 397
Query: 357 SDQIFRVACDKYGNYVIQTAL 377
D + + DK+GNYV+Q L
Sbjct: 398 EDLLVHITMDKFGNYVVQRLL 418
>gi|342184736|emb|CCC94218.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 830
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 116/237 (48%), Gaps = 12/237 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
AQD++GS+++Q + S S +D +F + E +++ + + +V K +E N QL
Sbjct: 421 FAQDQEGSRFIQRAVESATSDEVDALFREIFESPLELVVDIFGNYVLQKLLEIGNARQLA 480
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ + V ++ +G I+K ++ + P LD+++ LK + + G
Sbjct: 481 YAATRLQNN---VVSLTLQTYGCRVIQKCIEVMP--PEGLDIILAELKGNVAKCIQDQNG 535
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV +C+E I + FI + LA H GC + +D P +++ ++
Sbjct: 536 NHVVQKCVEVIPQ---RCGFIVSVFSGRVMELATHAYGCRVIQCIMDHC--PDQEEAIFS 590
Query: 283 ISVN-AASLSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
+ +L+ + GNYV+QHVL+ + D + I +L+G++ + S K S V++
Sbjct: 591 ELLQCVGTLATDQYGNYVIQHVLQRVRDDDKVGRIFDALKGNFYEFSKQKFASNVME 647
>gi|145501806|ref|XP_001436883.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404028|emb|CAK69486.1| unnamed protein product [Paramecium tetraurelia]
Length = 475
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 151/315 (47%), Gaps = 31/315 (9%)
Query: 122 SRFLDKVFNVVSE-------FTFQIICNQYARFVFGKF-IETCNEDQLLRITLQITSQDQ 173
SR + K+F S + Q C ++++ VFG + I+ E L + I Q
Sbjct: 163 SRKVQKIFETGSANQKQQIFWKVQANCQEFSKDVFGNYLIQKILEKGSLAQQILIFKQLL 222
Query: 174 LFV-QASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQ 232
+V + S + FG I+KL++ ++N L++ ++ +K+ + L++ + G V+L+CLE
Sbjct: 223 PYVLELSKNNFGCRVIQKLIEIISNNDQLINPFIEEIKKNVQSLLIDQNGKYVILKCLEN 282
Query: 233 IYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAAS-LS 291
+ + FI + E C ++ + GC + I+ P + L I ++ L
Sbjct: 283 L--QIDAVRFILKPTEEQCNHMCDSQYGCKIIQKLIENY--PSQVDDLIQICISTQDLLY 338
Query: 292 RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYI 349
++ SGNY++Q+ ++ P +E I + H L K S V+ L+Y N +
Sbjct: 339 KSQSGNYIIQYA--IKQPKNLEVIANYIINHLEYLCFNKYASNTVEAILEYLTPKLKNDL 396
Query: 350 VEEFLLNSDQ----IF-RVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR 404
++ + SDQ IF +A + +GNYVI+ L L Q+L+ ++QNL+ L+
Sbjct: 397 IQILIKLSDQNKMFIFINIATNPFGNYVIKRLLYTF----ELEHTQQLLNVIKQNLNLLQ 452
Query: 405 F----GYGKHVYNFI 415
+ YG+ +Y +
Sbjct: 453 YIKQSDYGQRIYTIL 467
>gi|340518502|gb|EGR48743.1| predicted protein [Trichoderma reesei QM6a]
Length = 341
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 143/319 (44%), Gaps = 34/319 (10%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL + +S +++F + Q++ + + +V KF E ++ Q +
Sbjct: 35 DQHGSRFIQQKLETANSDEKEQIFREIEPNAVQLMKDVFGNYVIQKFFEYGSQLQKKILA 94
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMK--AVANRPPLLDLVMKALKRLFRLLMMTKPGS 223
++ + V SV + ++K ++ V + L + + R+ + + G+
Sbjct: 95 EKMKGK---VVDLSVQVYACRVVQKALEHILVEQQAALTRELEPEILRVIK----DQNGN 147
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLI 283
VV + +E + + DFI +A LA H GC + ++ + +I+ +
Sbjct: 148 HVVQKIIELVPRQHI--DFIMKAVRGQVTPLASHAYGCRVIQRLLEHGTEADKAEIMGEL 205
Query: 284 SVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR 343
+A L + GNYV QHV++ +P E I + G + LS K S VV+ C++Y
Sbjct: 206 HASAQLLITDQYGNYVAQHVIQNGEPEDRERIIRLVMGQLLTLSKHKFASNVVEKCIEYG 265
Query: 344 ITVNY-IVEEFLLNS--------DQIFRVACDKYGNYVIQT-----------ALIETMRP 383
+ E L + Q+ R D++GNYVIQ AL+E ++P
Sbjct: 266 TPAQRTTIREQLTTAGPDGNNPLQQMMR---DQFGNYVIQKLLGQLQGDEREALVEEIKP 322
Query: 384 NSLHLHQRLVTKLQQNLDS 402
L + + ++ Q L+
Sbjct: 323 QFYTLKKSVASRQVQALEK 341
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++QI I NA L ++ GNYV+Q E
Sbjct: 28 HAVEFSGDQHGSRFIQQKLETANSDEKEQIFREIEPNAVQLMKDVFGNYVIQKFFEYGSQ 87
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSD---QIFRVACD 366
+ + ++G +DLS+ VVQ L++ + + ++ L + +I RV D
Sbjct: 88 LQKKILAEKMKGKVVDLSVQVYACRVVQKALEHIL----VEQQAALTRELEPEILRVIKD 143
Query: 367 KYGNYVIQTAL 377
+ GN+V+Q +
Sbjct: 144 QNGNHVVQKII 154
>gi|167384832|ref|XP_001737111.1| pumilio [Entamoeba dispar SAW760]
gi|165900241|gb|EDR26620.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 526
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 157/333 (47%), Gaps = 41/333 (12%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ-- 160
++++ GS+ +Q+ + G+ K++ + + ++ + +A +V K +E E +
Sbjct: 215 MSKEHNGSRTVQQSIEKGNETERQKIWRALQDHIVELSSDLFANYVIQKALEFIPESRHI 274
Query: 161 --------LLRITLQITSQDQLFVQASVDKFGSSSIRKLMK--AVANRPPLLDLVMKALK 210
+LR+TL + +G ++K ++ +V +R L + + K+L
Sbjct: 275 VPQKMKGNVLRLTLHM--------------YGCRVVQKAVEYASVKDRRLLFEELRKSLV 320
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLAC-HEQGCINMNNFID 269
R + G+ V+ +C+E+ + + AL+ + C H GC + I+
Sbjct: 321 RCIE----DQNGNHVIQKCVEK---GDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIE 373
Query: 270 EMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLT 329
+ ++L +I ++ L+ + GNYVVQ+VLE P I ++G+ + LS+
Sbjct: 374 SVDYDCVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMG 433
Query: 330 KCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLH 387
K S V++ C K+ I+EE N+ I ++ D++ NYV+Q +IE + +SL
Sbjct: 434 KYSSNVIEKCFKFATPNERQQILEEIYQNNG-ILQMMQDQFANYVVQ-KIIEAI--DSLE 489
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHVYNFIKDCD 419
+ + ++ NL L + Y KH+ N ++ D
Sbjct: 490 REKIVELFIKPNLSILKKVTYTKHILNLLETLD 522
>gi|330797119|ref|XP_003286610.1| hypothetical protein DICPUDRAFT_31148 [Dictyostelium purpureum]
gi|325083435|gb|EGC36888.1| hypothetical protein DICPUDRAFT_31148 [Dictyostelium purpureum]
Length = 332
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 150/321 (46%), Gaps = 20/321 (6%)
Query: 104 AQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLR 163
++D+ GS+ +Q+K+ + VF+ V ++ + + +V KF E +Q
Sbjct: 16 SKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKFFEHGTTEQKRI 75
Query: 164 ITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGS 223
+ +++ + ++ +G I+K ++++ +L ++ L + + G+
Sbjct: 76 LADKLSGH---ILSLTLQMYGCRVIQKAIESIELDKQIL--LIGELNGHIVQCVTDQNGN 130
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLI 283
V+ +C+E+I N FI + H LA H GC + ++ + IL +
Sbjct: 131 HVIQKCIEKI--PTNLIQFIIDSFHGHIYQLATHPYGCRVIQRILEHCAESQVAPILDEL 188
Query: 284 SVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR 343
A SL ++ GNYV+QHVLE I + L+G +LS K S V++ C+++
Sbjct: 189 MRCAVSLVQDQYGNYVIQHVLENGSQRDKTAIVYKLQGQIYNLSQHKFASNVIEKCVQHG 248
Query: 344 ITVN--YIVEEFLLN------SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
++ I+ E L + S+ + ++ D Y NYVIQ L + + P+ + ++ +
Sbjct: 249 VSSERILIINEILGDINAPNSSNVLLKILKDPYANYVIQKIL-DIVEPSQRDV---IINR 304
Query: 396 LQQNLDSL-RFGYGKHVYNFI 415
+Q + +L + GKH+ + I
Sbjct: 305 IQPFIPTLKKVTPGKHIISRI 325
>gi|255080292|ref|XP_002503726.1| predicted protein [Micromonas sp. RCC299]
gi|226518993|gb|ACO64984.1| predicted protein [Micromonas sp. RCC299]
Length = 806
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 156/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + VF V Q+I + + +V KF+E ++
Sbjct: 442 VVEFSSDQHGSRFIQQKLETAEPEEAAAVFAEVLPSAHQLITDVFGNYVVQKFLEYGTDE 501
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAV--ANRPPLLDLVMKALKRLFRLLM 217
Q R L +D + S+ +G I+K ++ A + +++ + + R R
Sbjct: 502 Q--RRLLAGELKDHVL-SLSLQMYGCRVIQKALEVFDEAQQTAMVNELDGHVLRCVR--- 555
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +C+E++ + FI + + L L+ H GC + ++ P +K
Sbjct: 556 -DQNGNHVIQKCIERV--PPARIQFIVSSFYGNVLSLSTHPYGCRVIQRVLEHCT-PEQK 611
Query: 278 --QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
I+ I A L+++ GNYVVQHVL+ I +L G + L+ K S V
Sbjct: 612 TEGIMDEILREAVQLAQDQYGNYVVQHVLQHGGEDERRKILATLAGQIVILAQHKFASNV 671
Query: 336 VQNCLKY--RITVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
++ CL Y ++ E L +D+ + + D++ NYV+Q L+E +
Sbjct: 672 IEKCLTYCGAEERQIMITEMLGTTDENEPLQAMMKDQFANYVVQK-LLEVCDEGE---RE 727
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
+L++++Q +L +L +F YGKH+
Sbjct: 728 QLLSRMQVHLPNLKKFTYGKHI 749
>gi|322707325|gb|EFY98904.1| hypothetical protein MAA_06043 [Metarhizium anisopliae ARSEF 23]
Length = 852
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 146/332 (43%), Gaps = 37/332 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL S +S D+VF + Q++ + + +V KF E N+
Sbjct: 461 LVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKFFEHGNQV 520
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDL---VMKALKRLFRLL 216
Q + ++ + V SV + ++K ++ V L++ + K L+ +
Sbjct: 521 QKKVLAEKMKGK---VVDLSVQVYACRVVQKALEHV-----LVEQQAELTKELEPEILRV 572
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ + G+ VV + +E + DFI A LA H GC + ++ +
Sbjct: 573 IRDQNGNHVVQKIIELVPRQC--IDFIMNAVRGQVTALASHTYGCRVIQRMLEHGTESDK 630
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+I+ + +A L + GNYV QHV++ P + + + LS K S VV
Sbjct: 631 MEIMMELHASAQILITDQYGNYVAQHVIQNGKPEDRAQMIDLVMSQLLTLSKHKFASNVV 690
Query: 337 QNCLKYRITVNY--IVEEF-LLNSD------QIFRVACDKYGNYVIQT-----------A 376
+ C+++ I E+ + SD Q+ R D+YGNYVIQ
Sbjct: 691 EKCIEHGTAEQRTSIREQLTTVGSDGTSPLQQMMR---DQYGNYVIQKLLGQLEGREREM 747
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLRFGYG 408
L+E ++P L + ++ Q L+ L G G
Sbjct: 748 LVEEIKPQFYALKKNGTSRQLQALEKL-LGLG 778
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 14/203 (6%)
Query: 173 QLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQ 232
Q F A + +G + AN PP+ R PG V L++
Sbjct: 394 QNFRNAMMSGYGIPPVPSAYSLAANLPPV------------RPSRDQDPGKGVRSVLLDE 441
Query: 233 IYHHNNKND-FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLS 291
N N + + H + + + G + ++ + Q+ I NA L
Sbjct: 442 FRLSNKSNKRYELKDIYNHLVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLM 501
Query: 292 RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVE 351
++ GNYVVQ E + + + ++G +DLS+ VVQ L++ + V E
Sbjct: 502 KDVFGNYVVQKFFEHGNQVQKKVLAEKMKGKVVDLSVQVYACRVVQKALEH-VLVEQQAE 560
Query: 352 EFLLNSDQIFRVACDKYGNYVIQ 374
+I RV D+ GN+V+Q
Sbjct: 561 LTKELEPEILRVIRDQNGNHVVQ 583
>gi|218194334|gb|EEC76761.1| hypothetical protein OsI_14838 [Oryza sativa Indica Group]
Length = 756
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 143/316 (45%), Gaps = 54/316 (17%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ ++ D+ GS+++Q+KL + +K+F + + + + +V KF E E
Sbjct: 453 VMEVSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATES 512
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
QL ++ Q+ F+Q S +G ++K++ V L R + +
Sbjct: 513 QLSQLADQLRGH---FLQLSFQMYGCRVVQKVIDVVD---------------LERKISIV 554
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ VL+C+ N N + LEHC A + +
Sbjct: 555 GELKNSVLRCISD----QNGNHRV----LEHCHNPAT-------------------QSAV 587
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I A L+ + GNYVVQHVLE P +I L G ++LS K S VV+ C
Sbjct: 588 MDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKC 647
Query: 340 LKYRI--TVNYIVEEFLLNSDQIFR-VACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
L + ++ E +++S Q F+ + D++GNYV+Q +++T L + +++ +
Sbjct: 648 LSFGTPDEREGLIRE-IVSSGQTFQGLMKDQFGNYVVQR-ILQTCDDKFLVV---ILSSI 702
Query: 397 QQNLDSLR-FGYGKHV 411
+ +L+ L+ + +GKH+
Sbjct: 703 KMHLNELKNYTFGKHI 718
>gi|449496651|ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Cucumis
sativus]
Length = 1043
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 151/325 (46%), Gaps = 30/325 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ + D+ GS+++Q+KL + + + ++ + ++ + + +V KF E
Sbjct: 709 VFEFSGDQYGSRFIQQKLETATADXKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAA 768
Query: 160 QLLRITLQITSQDQLFVQA---SVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
Q + ++LF S+ +G I+K ++ V LD +K + L +
Sbjct: 769 QRRELA------NKLFGHVLTLSLQMYGCRVIQKAIEVVD-----LDQKIKMVGELDGHV 817
Query: 217 MM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
M + G+ V+ +C+E + + FI + + L+ H GC + ++ K
Sbjct: 818 MRCVRDQNGNHVIQKCIECVPE--SAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKD 875
Query: 274 PR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+ +++ I + + L+++ GNYVVQHVLE + I L G + +S K
Sbjct: 876 ETTQSRVMEEILGSVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQKFA 935
Query: 333 SFVVQNCLKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL + +V E L +D+ + + D++ NYV+Q L ET
Sbjct: 936 SNVVEKCLTFGGPTERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQRE 994
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHV 411
L ++++++ +L++L ++ YGKH+
Sbjct: 995 L---ILSRIKVHLNALKKYTYGKHI 1016
>gi|324503008|gb|ADY41314.1| Maternal protein pumilio [Ascaris suum]
Length = 736
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 154/328 (46%), Gaps = 30/328 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ AQD+ GS+++Q+KL + VF V+ ++ + + +V KF E +
Sbjct: 392 VVEFAQDQHGSRFIQQKLERASVKEKQAVFEEVAAHAQSLMTDVFGNYVIQKFFEYGTPE 451
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q ++T I + ++ +G I+K ++++ P ++K ++ +
Sbjct: 452 QKNQLTSAIKGN---VMNLALQMYGCRVIQKALESI--EPNQQMEILKEMEGQVLKCVKD 506
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEH-----CLYLACHEQGCINMNNFIDEMKGP 274
+ G+ VV + +E++ ++ FI A ++ L+ H GC + ++
Sbjct: 507 QNGNHVVQKVIERV--DPSRLQFIIDAFVQPGDNLTVCNLSTHPYGCRVIQRVLEHCTEE 564
Query: 275 RRKQILYLISVNAASLSRNFSGNYVVQHVLE---LEDPYLIETICFSLRGHYIDLSLTKC 331
+++ +L + ++ +L + GNYV+QHV+E +ED + I ++G + + K
Sbjct: 565 QKRPVLDQLHMHIKTLVVDQYGNYVIQHVIEHGSMED---RDRIVNQIKGDVLRFAQHKF 621
Query: 332 GSFVVQNCLKYRIT--VNYIVEEFLLNSDQ-----IFRVACDKYGNYVIQTALIETMRPN 384
S V++ CL N ++ E N + + + D++ NYV+Q L +
Sbjct: 622 ASNVIEKCLTCGAPHHKNALITEVCGNPNDTTATPLLMMMKDQFANYVVQKMLDVA---D 678
Query: 385 SLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
S H ++++ ++ ++ +LR + YGKH+
Sbjct: 679 SAH-RKKMMLAIKPHIPALRKYNYGKHI 705
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 237 NNKNDFIYQAAL-EHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFS 295
NN+N + + L H + A + G + ++ ++ + ++ +A SL +
Sbjct: 377 NNRNPHLQLSDLGNHVVEFAQDQHGSRFIQQKLERASVKEKQAVFEEVAAHAQSLMTDVF 436
Query: 296 GNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLL 355
GNYV+Q E P + +++G+ ++L+L G V+Q L+ I N +E
Sbjct: 437 GNYVIQKFFEYGTPEQKNQLTSAIKGNVMNLALQMYGCRVIQKALE-SIEPNQQMEILKE 495
Query: 356 NSDQIFRVACDKYGNYVIQTALIETMRPNSLHL 388
Q+ + D+ GN+V+Q +IE + P+ L
Sbjct: 496 MEGQVLKCVKDQNGNHVVQK-VIERVDPSRLQF 527
>gi|212722650|ref|NP_001132499.1| uncharacterized protein LOC100193958 [Zea mays]
gi|194694542|gb|ACF81355.1| unknown [Zea mays]
Length = 472
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 242 FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQ 301
FI++A ++C LA + G + N +D + ++ I +S + L+++ SGN++VQ
Sbjct: 296 FIFEAVAQNCTRLAYQQNGLRLLQNCLDRVSQKQKDYIFTQLSYESLFLAQDSSGNWIVQ 355
Query: 302 HVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK--YRITVNYIVEEFLLNSDQ 359
VL DP IE I LR HY+ L+ K S VV+ CL+ + + IV EF+ S
Sbjct: 356 DVLRRGDPSHIEIIASCLRNHYVTLAKNKYSSNVVEWCLRVFHEEERSVIVYEFISYSH- 414
Query: 360 IFR-VACDKYGNYVIQTAL 377
FR + D++ N+ + TAL
Sbjct: 415 -FRDLVTDEFANFALSTAL 432
>gi|322702154|gb|EFY93902.1| hypothetical protein MAC_00393 [Metarhizium acridum CQMa 102]
Length = 829
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 146/332 (43%), Gaps = 37/332 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL S +S D+VF + Q++ + + +V KF E N+
Sbjct: 438 VVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKFFEHGNQV 497
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDL---VMKALKRLFRLL 216
Q + ++ + V S+ + ++K ++ V L++ + K L+ +
Sbjct: 498 QKKVLAEKMKGK---VVDLSMQVYACRVVQKALEHV-----LVEQQAELTKELEPDILRV 549
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ + G+ VV + +E + DFI A LA H GC + ++ +
Sbjct: 550 IRDQNGNHVVQKIIELVPRQC--IDFIMNAVRGQVTALASHTYGCRVIQRMLEHGTESDK 607
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+I+ + +A L + GNYV QHV++ P + + + LS K S VV
Sbjct: 608 MEIMTELHASAQILITDQYGNYVAQHVIQNGKPEDRARMIDLVMAQLLTLSKHKFASNVV 667
Query: 337 QNCLKYRITVNY--IVEEF-LLNSD------QIFRVACDKYGNYVIQT-----------A 376
+ C+++ I E+ + SD Q+ R D+YGNYVIQ
Sbjct: 668 EKCIEHGTAEQRTSIREQLTTVGSDGTSPLQQMMR---DQYGNYVIQKLLGQLEGRERHM 724
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLRFGYG 408
L+E ++P L + ++ Q L+ L G G
Sbjct: 725 LVEEIKPQFFALKKNGTSRQLQALEKL-LGLG 755
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 78/203 (38%), Gaps = 14/203 (6%)
Query: 173 QLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQ 232
Q F A + +G + AN PP+ R PG V L++
Sbjct: 371 QNFRNAMMSGYGIHPVPSAYSLAANLPPV------------RPSRDQDPGKGVRSVLLDE 418
Query: 233 IYHHNNKND-FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLS 291
N N + + H + + + G + ++ + Q+ I NA L
Sbjct: 419 FRLSNKSNKRYELKDIYNHVVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLM 478
Query: 292 RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVE 351
++ GNYVVQ E + + + ++G +DLS+ VVQ L++ +
Sbjct: 479 KDVFGNYVVQKFFEHGNQVQKKVLAEKMKGKVVDLSMQVYACRVVQKALEHVLVEQQAEL 538
Query: 352 EFLLNSDQIFRVACDKYGNYVIQ 374
L D I RV D+ GN+V+Q
Sbjct: 539 TKELEPD-ILRVIRDQNGNHVVQ 560
>gi|255648502|gb|ACU24710.1| pumilo [Bombyx mori]
Length = 309
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 129/287 (44%), Gaps = 11/287 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VFN + + ++ + + +V KF E +
Sbjct: 19 IVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEFGTTE 78
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++ P V++ L +
Sbjct: 79 QKTTLAQKVRGH---VLNLALQMYGCRVIQKALESIP--PEQQQEVVRELDGHVLKCVKD 133
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + FI A L+ H GC + ++ + +
Sbjct: 134 QNGNHVVQKCIECV--EPSALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTPEQTAPV 191
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L + GNYVVQHVLE + ++RG + LS K S VV+ C
Sbjct: 192 LNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVEKC 251
Query: 340 LKY--RITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRP 383
+ + R +++E N + + + D++ NYV+Q +I+ P
Sbjct: 252 VTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQK-MIDVAEP 297
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 15/217 (6%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIR-KLMKAVANRPPLL--DLVMKALKRLFRLLMMTKPG 222
LQ+ V+ S D+ GS I+ KL +A ++ +++ A LM G
Sbjct: 10 LQLRDLANHIVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGAAYS-----LMTDVFG 64
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ + E + + + Q H L LA GC + ++ + ++++++
Sbjct: 65 NYVIQKFFE--FGTTEQKTTLAQKVRGHVLNLALQMYGCRVIQKALESIPPEQQQEVVRE 122
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
+ + ++ +GN+VVQ +E +P ++ I + G LS G V+Q L++
Sbjct: 123 LDGHVLKCVKDQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQRILEH 182
Query: 343 RI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ E ++DQ+ D+YGNYV+Q L
Sbjct: 183 CTPEQTAPVLNELHAHTDQLI---TDQYGNYVVQHVL 216
>gi|350636136|gb|EHA24496.1| translation repression protein [Aspergillus niger ATCC 1015]
Length = 894
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 141/322 (43%), Gaps = 22/322 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S ++VF + + Q++ + + +V K E N+
Sbjct: 479 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQT 538
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 539 QKKILANQMKGH---ILSLSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLRC 590
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + FI A LA H GC + ++ + R
Sbjct: 591 VRDQNGNHVIQKAIERVPSQYVQ--FIINAFKGQVERLATHPYGCRVIQRMLEHCEEVDR 648
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + + L + GNYV+QHV+E + + + + S K S VV
Sbjct: 649 ESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVV 708
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ ++Y R ++ + + + D+YGNYVIQ L + ++
Sbjct: 709 EKSIEYGEESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKILGQL--DDTSEEKY 766
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
L ++Q LD L +F YGK +
Sbjct: 767 SLAVRIQPMLDQLKKFSYGKQI 788
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
S VV + + + NK + Y+ H + + + G + ++ ++Q+
Sbjct: 449 SQVVRSPVLEEFRAQNKGNKRYELKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVF 508
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
I N+ L + GNYVVQ + E + + + ++GH + LS G VVQ L
Sbjct: 509 REIQSNSLQLMTDVFGNYVVQKLFEHGNQTQKKILANQMKGHILSLSTQMYGCRVVQKAL 568
Query: 341 KYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ +T +V+E + + R D+ GN+VIQ A+
Sbjct: 569 EHILTDQQASMVKEL---ENHVLRCVRDQNGNHVIQKAI 604
>gi|298709331|emb|CBJ31267.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 729
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 152/342 (44%), Gaps = 51/342 (14%)
Query: 103 LAQDEQGSQYLQEKL-------TSGDSRFLDKVFNVVSEFTFQIICN-------QYARFV 148
+++D+ G + LQ+KL GD+ + VS + + N + ++
Sbjct: 391 MSRDQVGCRLLQQKLDECPDRPPEGDAGKEPSEDDAVSAIFMEALPNLSMMMIDPFGNYL 450
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
F K ++ Q L +T + +A+V+ G+ ++K+++ + ++ ++
Sbjct: 451 FQKLFVKVDDHQRLLAVEAVTDR---MPEAAVNLHGTRCVQKVVE-LCRTDAQAAVIARS 506
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
L L + G+ VV + L+ + +NDF+ +A + +A H GC + +
Sbjct: 507 LGPSVVKLSLDPNGNHVVQRALQHM--PAPRNDFVLEAITASLVQVAIHRHGCCVLQRCL 564
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLEL---EDPYLIETICFSLRGHYID 325
D R +++ ++ N L ++ GNYVVQ+VL+ E+ Y+ +C + GH
Sbjct: 565 DAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYM---LCSAPLGHVAS 621
Query: 326 LSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA------- 376
LS K S V++ CL+ + + VEE L +I + D+Y NYV+Q A
Sbjct: 622 LSTQKFSSNVMEACLERALPEVQSKFVEE-LAQQGRIRELILDQYANYVVQRALTVANNE 680
Query: 377 ----LIETMRPNSLHLH--------QRLVTKLQQNLDSLRFG 406
L+ +RP HLH +R+ K+ + ++ G
Sbjct: 681 EGLKLVNAIRP---HLHSMQSTSSGRRIAAKIIKRYPTVDLG 719
>gi|317035324|ref|XP_001396658.2| mRNA binding protein Pumilio 2 [Aspergillus niger CBS 513.88]
Length = 912
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 141/322 (43%), Gaps = 22/322 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S ++VF + + Q++ + + +V K E N+
Sbjct: 497 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQT 556
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 557 QKKILANQMKGH---ILSLSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLRC 608
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + FI A LA H GC + ++ + R
Sbjct: 609 VRDQNGNHVIQKAIERVPSQYVQ--FIINAFKGQVERLATHPYGCRVIQRMLEHCEEVDR 666
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + + L + GNYV+QHV+E + + + + S K S VV
Sbjct: 667 ESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVV 726
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ ++Y R ++ + + + D+YGNYVIQ L + ++
Sbjct: 727 EKSIEYGEESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKILGQL--DDTSEEKY 784
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
L ++Q LD L +F YGK +
Sbjct: 785 SLAVRIQPMLDQLKKFSYGKQI 806
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
S VV + + + NK + Y+ H + + + G + ++ ++Q+
Sbjct: 467 SQVVRSPVLEEFRAQNKGNKRYELKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVF 526
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
I N+ L + GNYVVQ + E + + + ++GH + LS G VVQ L
Sbjct: 527 REIQSNSLQLMTDVFGNYVVQKLFEHGNQTQKKILANQMKGHILSLSTQMYGCRVVQKAL 586
Query: 341 KYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ +T +V+E + + R D+ GN+VIQ A+
Sbjct: 587 EHILTDQQASMVKEL---ENHVLRCVRDQNGNHVIQKAI 622
>gi|449450756|ref|XP_004143128.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1043
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 151/325 (46%), Gaps = 30/325 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ + D+ GS+++Q+KL + + + ++ + ++ + + +V KF E
Sbjct: 709 VFEFSGDQYGSRFIQQKLETATADEKNMIYQEIMPQALALMTDVFGNYVIQKFFEHGLAA 768
Query: 160 QLLRITLQITSQDQLFVQA---SVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
Q + ++LF S+ +G I+K ++ V LD +K + L +
Sbjct: 769 QRRELA------NKLFGHVLTLSLQMYGCRVIQKAIEVVD-----LDQKIKMVGELDGHV 817
Query: 217 MM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
M + G+ V+ +C+E + + FI + + L+ H GC + ++ K
Sbjct: 818 MRCVRDQNGNHVIQKCIECVPE--SAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKD 875
Query: 274 PR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+ +++ I + + L+++ GNYVVQHVLE + I L G + +S K
Sbjct: 876 ETTQSRVMEEILGSVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQKFA 935
Query: 333 SFVVQNCLKYRITVN--YIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL + +V E L +D+ + + D++ NYV+Q L ET
Sbjct: 936 SNVVEKCLTFGGPTERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQRE 994
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHV 411
L ++++++ +L++L ++ YGKH+
Sbjct: 995 L---ILSRIKVHLNALKKYTYGKHI 1016
>gi|413942338|gb|AFW74987.1| hypothetical protein ZEAMMB73_090092 [Zea mays]
Length = 919
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 157/370 (42%), Gaps = 72/370 (19%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + D VF+ + ++ + + +V KF E +
Sbjct: 540 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTA 599
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q+ + Q+ + + S+ +G I+K ++ V LDL K + L +M
Sbjct: 600 QIKELAGQLIGR---VLALSLQMYGCRVIQKAIEVVD-----LDLQTKMVAELEGHVMRC 651
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E I H +FI + L+ H GC + ++ P+
Sbjct: 652 VRDQNGNHVIQKCIECIPQH--AIEFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKT 709
Query: 277 KQILY-LISVNAASLSRNFSGNYVVQ---------------------------------- 301
+QI+ I + L+++ GNYVVQ
Sbjct: 710 QQIMMDEILQSVCLLAQDQYGNYVVQYCCLFHVAMCCAAVWNRKQQERCEYCCLSHVAMC 769
Query: 302 --------------HVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR--IT 345
HVLE P+ I L G + +S K S V++ CL + +
Sbjct: 770 CAAVWNRKQQERCEHVLEHGKPHERSAIIEKLIGQVVQMSQQKFASNVIEKCLAFGNPVE 829
Query: 346 VNYIVEEFLLN---SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDS 402
++ E L + S+ + + D++ NYV+Q L ET + ++T+++ +L++
Sbjct: 830 RQVLIGEMLGSTSESEPLEVMMKDQFANYVVQKVL-ETCDDQQREM---ILTRIKTHLNT 885
Query: 403 L-RFGYGKHV 411
L ++ YGKH+
Sbjct: 886 LKKYTYGKHI 895
>gi|134082176|emb|CAK42288.1| unnamed protein product [Aspergillus niger]
Length = 950
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 142/327 (43%), Gaps = 22/327 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S ++VF + + Q++ + + +V K E N+
Sbjct: 535 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQT 594
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 595 QKKILANQMKGH---ILSLSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLRC 646
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + FI A LA H GC + ++ + R
Sbjct: 647 VRDQNGNHVIQKAIERVPSQYVQ--FIINAFKGQVERLATHPYGCRVIQRMLEHCEEVDR 704
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + + L + GNYV+QHV+E + + + + S K S VV
Sbjct: 705 ESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVV 764
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ ++Y R ++ + + + D+YGNYVIQ L + ++
Sbjct: 765 EKSIEYGEESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKILGQL--DDTSEEKY 822
Query: 391 RLVTKLQQNLDSL-RFGYGKHVYNFIK 416
L ++Q LD L +F YGK + K
Sbjct: 823 SLAVRIQPMLDQLKKFSYGKQIVAIEK 849
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
S VV + + + NK + Y+ H + + + G + ++ ++Q+
Sbjct: 505 SQVVRSPVLEEFRAQNKGNKRYELKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVF 564
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
I N+ L + GNYVVQ + E + + + ++GH + LS G VVQ L
Sbjct: 565 REIQSNSLQLMTDVFGNYVVQKLFEHGNQTQKKILANQMKGHILSLSTQMYGCRVVQKAL 624
Query: 341 KYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ +T +V+E + + R D+ GN+VIQ A+
Sbjct: 625 EHILTDQQASMVKEL---ENHVLRCVRDQNGNHVIQKAI 660
>gi|300706085|ref|XP_002995351.1| hypothetical protein NCER_101799 [Nosema ceranae BRL01]
gi|239604391|gb|EEQ81680.1| hypothetical protein NCER_101799 [Nosema ceranae BRL01]
Length = 512
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 139/316 (43%), Gaps = 19/316 (6%)
Query: 101 LLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
+ +++D++GS+ +Q ++ + F+ + + + + N + +V K + NE Q
Sbjct: 205 VFMSKDQEGSRLIQNRIDISTENEIAWFFSQIEDSIYDLSSNLFGNYVIQKILPLLNESQ 264
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
+ + S+ S+ +G I+KLM +D +++ +K+ L+ +
Sbjct: 265 KFTVFTEFKSR---IYDLSLHPYGCRVIQKLMDCFE----CIDFIIEEIKQDIFCLIEDQ 317
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ V+ + +E+ N I + ++L+ H GC + ++ K+IL
Sbjct: 318 NGNHVIQKYIEKSPDKN----LIIDVFKKDPIFLSTHRYGCRVIQRLLEFCVEADVKKIL 373
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC- 339
++ N SL + GNYV+QH+L + D + + + +LS K S V++ C
Sbjct: 374 QILISNLESLVNDQYGNYVIQHMLTISDDSERNAVISQIINNCYNLSKFKFSSNVIEQCI 433
Query: 340 -LKYRITVNYIVEEFLLNSD---QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
+ N + +FL S +IF + D YGNYV+Q + + + L
Sbjct: 434 VISDHEQKNRFLNKFLEVSGGKPRIFNMCTDMYGNYVVQKFYDTVDNASKEKIRKSLKPF 493
Query: 396 LQQNLDSLRFGYGKHV 411
L+ D R + +H+
Sbjct: 494 LK---DLKRINFARHI 506
>gi|296814620|ref|XP_002847647.1| APUM2 [Arthroderma otae CBS 113480]
gi|238840672|gb|EEQ30334.1| APUM2 [Arthroderma otae CBS 113480]
Length = 916
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 126/287 (43%), Gaps = 19/287 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ D+ GS+++Q KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 519 IVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQA 578
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ Q ++ SV +G +++K ++ V L++ +K L +M
Sbjct: 579 QKRLLAQQM--QGHIY-SLSVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKC 630
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ N FI A H GC + ++ R
Sbjct: 631 VTNQNGNHVIQKAIERV--PNEHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADR 688
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL I SL + GNYV+QH++E + I + G + S K S VV
Sbjct: 689 LSILAEIHACTPSLISDQYGNYVIQHIIEFGEEADKNKIISIVLGQAVHFSKHKFASNVV 748
Query: 337 Q-----NCLKYRITVNYIVEEFLLNSD-QIFRVACDKYGNYVIQTAL 377
+ L+ R+ + I+ + + + D+YGNYVIQ +L
Sbjct: 749 EKSITFGTLEQRLGITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSL 795
>gi|391872405|gb|EIT81532.1| translational repressor Pumilio/PUF3 [Aspergillus oryzae 3.042]
Length = 906
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 155/340 (45%), Gaps = 50/340 (14%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S ++VF + + Q++ + + +V K E N+
Sbjct: 496 VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHGNQT 555
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 556 QKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELEHHVLRC 607
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + F+ A + LA H GC + ++ K R
Sbjct: 608 VRDQNGNHVIQKAIERVPSEHVQ--FVINAFIGQVEKLATHPYGCRVIQRMLEHCKEEDR 665
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+ IL + V A L + GNYV+QHV+ E +D + TI S + + S K S
Sbjct: 666 EAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMS---NLLTYSKHKFAS 722
Query: 334 FVVQNCLKY-RITVNYIVEEFLLNSDQ-----IFRVACDKYGNYVIQT-----------A 376
VV+ +++ + + + + L ++D + + D++GNYVIQ A
Sbjct: 723 NVVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKGAERDA 782
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIK 416
L+E ++P L+++L+ ++ YGK + K
Sbjct: 783 LVEEIKP--------LLSQLK------KYSYGKQIAAIEK 808
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 192 MKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAA--LE 249
M A++ P+ L AL R P +V LE+ + N+K + Y+
Sbjct: 438 MNALSGFYPVAQLGAAALAS--RGHRDHDPSQTVRSPVLEE-FRANSKGNKRYELKDIYN 494
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++Q+ I ++ L + GNYVVQ + E +
Sbjct: 495 HVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHGNQ 554
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YIVEEFLLNSDQIFRVACDK 367
+ + ++GH + LS G VVQ L++ +T +V+E + R D+
Sbjct: 555 TQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKEL---EHHVLRCVRDQ 611
Query: 368 YGNYVIQTAL 377
GN+VIQ A+
Sbjct: 612 NGNHVIQKAI 621
>gi|123483753|ref|XP_001324096.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121906973|gb|EAY11873.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 414
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 145/327 (44%), Gaps = 30/327 (9%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A+D Q + LQ+ L G +F + V N + + ++ C+ A FV K ++ +Q +
Sbjct: 100 MAKDRQNCRKLQDDLQFGTDKFRNIVLNSLIPYLGELYCDPSANFVVQKLLDYATREQKI 159
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
L +D L + + GS ++K ++ L+D + L L + G
Sbjct: 160 SF-LNAFKKDPL--EIANHPCGSRVMQKFIECADT--DLVDELYVFLSSSILDLCQSLHG 214
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ +V Q ++ + N+ I + + + + L GC + + + ++
Sbjct: 215 NRIVQQFIDIL---PNRVPEIIKCIMPYTISLVADNCGCRVVQHLFQPFDQNKLAPLISE 271
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
+ A L+ N GNYV+Q++++ + + + S +G+Y S+ K S V++ C++
Sbjct: 272 VIKAAPQLTANQYGNYVIQNIIDDGNEEQVAELIKSYKGYYYSFSIHKFASNVIERCIR- 330
Query: 343 RITVNYIVEEFLL----------NSDQIFRVACDKYGNYVIQTALI--ETMRPNSLHLHQ 390
N EF+ N D+I+ + DK+GNYVIQ L R N+++
Sbjct: 331 --RANQAQREFIFADIIGVEENYNYDRIYSLITDKFGNYVIQRILEFGSDSRINAIY--- 385
Query: 391 RLVTKLQQNLDSLR-FGYGKHVYNFIK 416
+ +N D L+ GY KHV +K
Sbjct: 386 ---DVVDKNYDELQDVGYAKHVITKLK 409
>gi|255945903|ref|XP_002563719.1| Pc20g12340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588454|emb|CAP86563.1| Pc20g12340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 906
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 147/332 (44%), Gaps = 44/332 (13%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 495 VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQT 554
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 555 QKKILANQMRGH---VLALSTQMYGCRVVQKALEHI-----LTDQQAAMVKELENHVLKC 606
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + FI A LA H GC + ++ + R
Sbjct: 607 VRDQNGNHVIQKAIERVPSQYVQ--FIINAFRGQVNRLAAHPYGCRVIQRMLEHCEEVDR 664
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + ++L + GNYV+QHV+E D + + G + S K S VV
Sbjct: 665 QSILAELHACTSNLIPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAYSKHKFASNVV 724
Query: 337 QNCLKYRI--TVNYIVEEFLLNSDQ----IFRVACDKYGNYVIQT-----------ALIE 379
+ +++ N+I+ +D+ + + D+YGNYVIQ ALIE
Sbjct: 725 EKSIEFGAEHERNHIISTLTSTNDRGESPLLGLMRDQYGNYVIQKVLGQLKDAEREALIE 784
Query: 380 TMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHV 411
++P L+++L+ +F YGK +
Sbjct: 785 QIKP--------LLSQLK------KFSYGKQI 802
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
VV L + + N+K + Y+ H + + + G + ++ ++Q+
Sbjct: 467 VVRSPLLEEFRANSKGNKRYELKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFRE 526
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I N L + GNYVVQ + E + + + +RGH + LS G VVQ L++
Sbjct: 527 IQPNCLQLMTDVFGNYVVQKLFEHGNQTQKKILANQMRGHVLALSTQMYGCRVVQKALEH 586
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 587 ILTDQQAAMVKEL---ENHVLKCVRDQNGNHVIQKAI 620
>gi|83771739|dbj|BAE61869.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 860
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 155/340 (45%), Gaps = 50/340 (14%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S ++VF + + Q++ + + +V K E N+
Sbjct: 450 VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHGNQT 509
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 510 QKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELEHHVLRC 561
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + F+ A + LA H GC + ++ K R
Sbjct: 562 VRDQNGNHVIQKAIERVPSEHVQ--FVINAFIGQVEKLATHPYGCRVIQRMLEHCKEEDR 619
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+ IL + V A L + GNYV+QHV+ E +D + TI S + + S K S
Sbjct: 620 EAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMS---NLLTYSKHKFAS 676
Query: 334 FVVQNCLKY-RITVNYIVEEFLLNSDQ-----IFRVACDKYGNYVIQT-----------A 376
VV+ +++ + + + + L ++D + + D++GNYVIQ A
Sbjct: 677 NVVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKGAERDA 736
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIK 416
L+E ++P L+++L+ ++ YGK + K
Sbjct: 737 LVEEIKP--------LLSQLK------KYSYGKQIAAIEK 762
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 192 MKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAA--LE 249
M A++ P+ L AL R P +V LE+ + N+K + Y+
Sbjct: 392 MNALSGFYPVAQLGAAALAS--RGHRDHDPSQTVRSPVLEE-FRANSKGNKRYELKDIYN 448
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++Q+ I ++ L + GNYVVQ + E +
Sbjct: 449 HVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHGNQ 508
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YIVEEFLLNSDQIFRVACDK 367
+ + ++GH + LS G VVQ L++ +T +V+E + R D+
Sbjct: 509 TQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKEL---EHHVLRCVRDQ 565
Query: 368 YGNYVIQTAL 377
GN+VIQ A+
Sbjct: 566 NGNHVIQKAI 575
>gi|167392700|ref|XP_001740261.1| pumilio [Entamoeba dispar SAW760]
gi|165895722|gb|EDR23351.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 525
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 156/333 (46%), Gaps = 41/333 (12%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ-- 160
++++ GS+ +Q+ + G K++ + + ++ + +A +V K +E E +
Sbjct: 214 MSKEHNGSRTVQQSIEKGSEDERQKIWRALQDHIVELSSDLFANYVIQKALEFIPESRHI 273
Query: 161 --------LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVA--NRPPLLDLVMKALK 210
+LR+TL + +G ++K ++ V+ +R L + + K+L
Sbjct: 274 VPQKMKGNVLRLTLHM--------------YGCRVVQKAVEYVSMKDRRLLFEELRKSLV 319
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLAC-HEQGCINMNNFID 269
R + G+ V+ +C+E+ + + AL+ + C H GC + I+
Sbjct: 320 RCIE----DQNGNHVIQKCVEK---GDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIE 372
Query: 270 EMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLT 329
+ ++L +I ++ L+ + GNYVVQ+VLE P I ++G+ + LS+
Sbjct: 373 SVDYDCVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMG 432
Query: 330 KCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLH 387
K S V++ C K+ I+EE N+ I ++ D++ NYV+Q +IE + +SL
Sbjct: 433 KYSSNVIEKCFKFATPNERQQILEEIYQNNG-ILQMMQDQFANYVVQ-KIIEAI--DSLE 488
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHVYNFIKDCD 419
+ + ++ NL L + Y KH+ N ++ D
Sbjct: 489 REKIVELFIKPNLSILKKVTYTKHILNLLETLD 521
>gi|389629662|ref|XP_003712484.1| hypothetical protein MGG_04985 [Magnaporthe oryzae 70-15]
gi|351644816|gb|EHA52677.1| hypothetical protein MGG_04985 [Magnaporthe oryzae 70-15]
Length = 888
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 139/309 (44%), Gaps = 32/309 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q KL + +S D++F + Q++ + + +V KF E N+
Sbjct: 497 VVEFSGDQHGSRFIQSKLETANSDEKDQIFKELEPNAVQLMKDVFGNYVIQKFFEHGNQV 556
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL-FRLLMM 218
Q + Q+ + V S + + ++K ++ V L++ + +K L ++ +
Sbjct: 557 QKKALASQMKGK---MVSLSTEMYACRVVQKALEHV-----LVEQQAELVKELEVEIVRI 608
Query: 219 TKP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
K G+ VV + +E + F+ + + L+ H GC + ++ +
Sbjct: 609 IKDANGNHVVQKIIELVPRQ--YISFVMDSIRGQVIQLSQHNYGCRVIQRMMEHGSDADK 666
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
I++ + +A L+ + GNYV+QH++ P + + + G + LS K S VV
Sbjct: 667 ATIMHELHQHAPMLTTDPYGNYVIQHIITHGKPEDRQKVISIVLGQIVLLSKHKLASNVV 726
Query: 337 QNCL-----KYRITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQT-----------ALIE 379
+ C+ + R + I+ ++ ++ D+Y NYV+Q A +E
Sbjct: 727 ERCIVSGTAEDRTAIRKIITTPGIDGTSPLQLMMKDQYANYVVQKLLEKLNGAERQAFVE 786
Query: 380 TMRP--NSL 386
M+P NSL
Sbjct: 787 EMKPQFNSL 795
>gi|384484809|gb|EIE76989.1| hypothetical protein RO3G_01693 [Rhizopus delemar RA 99-880]
Length = 747
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 15/260 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S VF V Q++ + + +V KF E N+
Sbjct: 492 IVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKFFEHGNQM 551
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S+ +G ++K ++ V L + K +K L ++
Sbjct: 552 QKTILAKQMEGH---VLSLSLQMYGCRVVQKALEHV-----LTEQQAKLVKELDGCVLKC 603
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A LA H GC + + +
Sbjct: 604 IKDQNGNHVIQKAIERVPAQHIQ--FIIDAFHGQVYNLATHPYGCRVIQRMFEHCTEDQT 661
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+L + + L ++ GNYV+QH+LE P + +RGH + LS K S VV
Sbjct: 662 GPLLDELHRCTSQLVQDQYGNYVIQHILERGRPADKSLVIEKIRGHVLQLSKHKFASNVV 721
Query: 337 QNCLKY--RITVNYIVEEFL 354
+ C+ + + ++EE L
Sbjct: 722 EKCVDFGSKRDRQLLIEEVL 741
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++ + + NA L + GNYV+Q E +
Sbjct: 491 HIVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKFFEHGNQ 550
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YIVEEFLLNSDQIFRVACDK 367
+ + GH + LSL G VVQ L++ +T +V+E + + D+
Sbjct: 551 MQKTILAKQMEGHVLSLSLQMYGCRVVQKALEHVLTEQQAKLVKEL---DGCVLKCIKDQ 607
Query: 368 YGNYVIQTAL 377
GN+VIQ A+
Sbjct: 608 NGNHVIQKAI 617
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 23/253 (9%)
Query: 172 DQLFVQASVDKFGSSSIR-KLMKAVANRPPLL--DLVMKALKRLFRLLMMTKPGSSVVLQ 228
D V+ S D+ GS I+ KL A ++ ++ +++ AL+ +MT + VLQ
Sbjct: 489 DGHIVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQ------LMTDVFGNYVLQ 542
Query: 229 CLEQIYHHNNKNDFIYQAALE-HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNA 287
H N I +E H L L+ GC + ++ + ++ +++ +
Sbjct: 543 KF--FEHGNQMQKTILAKQMEGHVLSLSLQMYGCRVVQKALEHVLTEQQAKLVKELDGCV 600
Query: 288 ASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RIT 345
++ +GN+V+Q +E I+ I + G +L+ G V+Q ++
Sbjct: 601 LKCIKDQNGNHVIQKAIERVPAQHIQFIIDAFHGQVYNLATHPYGCRVIQRMFEHCTEDQ 660
Query: 346 VNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRF 405
+++E + Q+ + D+YGNYVIQ ++E RP L ++ K++ ++ L+
Sbjct: 661 TGPLLDELHRCTSQLVQ---DQYGNYVIQH-ILERGRPADKSL---VIEKIRGHV--LQL 711
Query: 406 GYGKHVYNFIKDC 418
K N ++ C
Sbjct: 712 SKHKFASNVVEKC 724
>gi|154343920|ref|XP_001567904.1| putative pumilio protein 6 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065238|emb|CAM40666.1| putative pumilio protein 6 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 818
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 119/243 (48%), Gaps = 12/243 (4%)
Query: 97 NSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETC 156
N + A+D++GS+++Q + S LD +F+ + E +++ + + +V K ++
Sbjct: 403 NGYAVEFAKDQEGSRFIQSAVDSASPESLDILFHEIFEAPLELVTDIFGNYVLQKLLDKG 462
Query: 157 NEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
N QL ++ V+ ++ +G I+K ++ + P LD+++ LK
Sbjct: 463 NTPQLTFAAERMCGH---VVELTMQTYGCRVIQKCIEVMP--PAGLDIILAELKDNVAKC 517
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ + G+ V+ +C+E I + FI A + LA H GC + + P +
Sbjct: 518 IQDQNGNHVIQKCVEVI---PQQCGFIISAFSGRVMELATHAYGCRVIQCIMQHC--PEQ 572
Query: 277 KQILYLISVNAAS-LSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSF 334
+ ++ + A L+++ GNYV+QHVL+ ++D IE++ +L+ + LS K S
Sbjct: 573 EDTIFNELLKAVDVLAKDQYGNYVIQHVLQNVKDENKIESVYAALKPKFFYLSKQKFASN 632
Query: 335 VVQ 337
V++
Sbjct: 633 VME 635
>gi|255729316|ref|XP_002549583.1| hypothetical protein CTRG_03880 [Candida tropicalis MYA-3404]
gi|240132652|gb|EER32209.1| hypothetical protein CTRG_03880 [Candida tropicalis MYA-3404]
Length = 883
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 142/323 (43%), Gaps = 31/323 (9%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+D+ GS+++Q+KL +FN + E ++ ++ + + +V K+ E N Q
Sbjct: 556 FTKDQHGSRFIQQKLPEASDEEKQTIFNEIWEISYDLMTDVFGNYVIQKYFEHGNSTQKQ 615
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+ + + S+ +G +++ ++A+ L +++ LK + + G
Sbjct: 616 VLLESMIGH---IHELSLQMYGCRVVQRALEAIETEGQLR--IIEELKDHILVCCKDQNG 670
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ + +E+I + K FI + +L+ H GC + ++ +K IL
Sbjct: 671 NHVIQKSIEKIKPFS-KIRFILTSLDTQIYHLSTHPYGCRVIQRLLEFSDEDDQKMILTQ 729
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
++ L + GNYV+QH+LE P E I + G + S K S V++ C+K+
Sbjct: 730 LNNFLYYLILDQYGNYVIQHILENGTPEEKEPILEIVLGSVVQFSKHKFASNVIEKCIKF 789
Query: 343 RI--TVNYIVEEFLLNSDQIFR------------VACDKYGNYVIQTALIETMRPNSLHL 388
I+ E +L ++ I + D++GNYVIQ L+E L
Sbjct: 790 GDLNQRKRILHEVMLGNEDINDDSEIGDDSPLALMVKDQFGNYVIQK-LVEAFDGEERRL 848
Query: 389 HQRLVTKLQQ-------NLDSLR 404
L+ K+++ NL S+R
Sbjct: 849 ---LIVKIKKCLSLSGNNLASIR 868
>gi|317148910|ref|XP_001823002.2| mRNA binding protein Pumilio 2 [Aspergillus oryzae RIB40]
Length = 880
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 154/335 (45%), Gaps = 50/335 (14%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S ++VF + + Q++ + + +V K E N+
Sbjct: 470 VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHGNQT 529
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 530 QKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELEHHVLRC 581
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + F+ A + LA H GC + ++ K R
Sbjct: 582 VRDQNGNHVIQKAIERVPSEHVQ--FVINAFIGQVEKLATHPYGCRVIQRMLEHCKEEDR 639
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+ IL + V A L + GNYV+QHV+ E +D + TI S + + S K S
Sbjct: 640 EAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMS---NLLTYSKHKFAS 696
Query: 334 FVVQNCLKY-RITVNYIVEEFLLNSDQ-----IFRVACDKYGNYVIQT-----------A 376
VV+ +++ + + + + L ++D + + D++GNYVIQ A
Sbjct: 697 NVVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKGAERDA 756
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHV 411
L+E ++P L+++L+ ++ YGK +
Sbjct: 757 LVEEIKP--------LLSQLK------KYSYGKQI 777
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 192 MKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAA--LE 249
M A++ P+ L AL R P +V LE+ + N+K + Y+
Sbjct: 412 MNALSGFYPVAQLGAAALAS--RGHRDHDPSQTVRSPVLEE-FRANSKGNKRYELKDIYN 468
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++Q+ I ++ L + GNYVVQ + E +
Sbjct: 469 HVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHGNQ 528
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YIVEEFLLNSDQIFRVACDK 367
+ + ++GH + LS G VVQ L++ +T +V+E + R D+
Sbjct: 529 TQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKEL---EHHVLRCVRDQ 585
Query: 368 YGNYVIQTAL 377
GN+VIQ A+
Sbjct: 586 NGNHVIQKAI 595
>gi|358369705|dbj|GAA86319.1| mRNA binding protein Pumilio 2 [Aspergillus kawachii IFO 4308]
Length = 932
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 142/327 (43%), Gaps = 22/327 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S ++VF + + Q++ + + +V K E N+
Sbjct: 517 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQT 576
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 577 QKKILANQMKGH---ILSLSTQMYGCRVVQKALEHI-----LTDQQASMVKELESHVLRC 628
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + FI A LA H GC + ++ + R
Sbjct: 629 VRDQNGNHVIQKAIERVPSQYVQ--FIINAFKGQVDRLATHPYGCRVIQRMLEHCEEVDR 686
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + + L + GNYV+QHV+E + + + + S K S VV
Sbjct: 687 ESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVV 746
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ ++Y R ++ + + + D+YGNYVIQ L + ++
Sbjct: 747 EKSIEYGEESQRRQMISTLTSVNERGDSPLISLMRDQYGNYVIQKILGQL--DDTSEEKY 804
Query: 391 RLVTKLQQNLDSL-RFGYGKHVYNFIK 416
L ++Q LD L +F YGK + K
Sbjct: 805 SLAVRIQPMLDQLKKFSYGKQIVAIEK 831
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
S VV + + + NK + Y+ H + + + G + ++ ++Q+
Sbjct: 487 SQVVRSPVLEEFRAQNKGNKRYELKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVF 546
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
I N+ L + GNYVVQ + E + + + ++GH + LS G VVQ L
Sbjct: 547 REIQPNSLQLMTDVFGNYVVQKLFEHGNQTQKKILANQMKGHILSLSTQMYGCRVVQKAL 606
Query: 341 KYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ +T +V+E + R D+ GN+VIQ A+
Sbjct: 607 EHILTDQQASMVKEL---ESHVLRCVRDQNGNHVIQKAI 642
>gi|258570377|ref|XP_002543992.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904262|gb|EEP78663.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 877
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 131/293 (44%), Gaps = 32/293 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 503 IVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKLFEHGNQA 562
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD---LVMKALKRLFRLL 216
Q + Q+ + S +G ++K ++ V LLD ++K L+
Sbjct: 563 QKKALAQQMMGH---ILNLSTQMYGCRVVQKALEHV-----LLDQQAAIVKELEHHVIKC 614
Query: 217 MMTKPGSSVVLQCLEQIYHHNNK---NDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
+ + G+ V+ + +E++ + + NDF Q A H GC + ++
Sbjct: 615 VKDQNGNHVIQKAIERVPQAHIQFIINDFKGQ-----IQRWAVHSYGCRVIQRMLEHCDE 669
Query: 274 PRRKQILYLISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLT 329
R+ IL + V + +L + GNYV+QHV+ E + +I + L + S
Sbjct: 670 EDREAILAELHVCSGNLISDQFGNYVIQHVIENGKEKDRAQMIAVVISDL----VTYSKH 725
Query: 330 KCGSFVVQNCLKY-----RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
K S VV+ +++ R+ + I D + + D++GNYV+Q L
Sbjct: 726 KFASNVVEKTIEFGRNSDRLDILRIFTTLDERGDPLLDLMRDQFGNYVVQKVL 778
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++++ I NA L + GNYV+Q + E +
Sbjct: 502 HIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKLFEHGNQ 561
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVACDK 367
+ + + GH ++LS G VVQ L++ + IV+E + + D+
Sbjct: 562 AQKKALAQQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAIVKEL---EHHVIKCVKDQ 618
Query: 368 YGNYVIQTAL 377
GN+VIQ A+
Sbjct: 619 NGNHVIQKAI 628
>gi|296417426|ref|XP_002838359.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634287|emb|CAZ82550.1| unnamed protein product [Tuber melanosporum]
Length = 999
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 143/322 (44%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S + +F + + Q++ + + +V KF E N+
Sbjct: 621 VVEFSGDQHGSRFIQQKLETANSDEKETIFAEIKSNSLQLMTDVFGNYVIQKFFEHGNQL 680
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ + S+ +G ++K ++ + L + +K L ++
Sbjct: 681 QKSILAKQMEGH---VLALSLQMYGCRVVQKALEHI-----LTEQQASLVKELDGSVLKC 732
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ VV + +E++ + + FI +A LA H GC + ++ +
Sbjct: 733 VKDQNGNHVVQKAIERVPAEHIQ--FIIKAFRGQVHTLATHPYGCRVIQRMLEHCDETAQ 790
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+L + V +L ++ GNYV QHV+E P I + + S K S VV
Sbjct: 791 ASLLQELHVCTIALVQDQYGNYVTQHVIEHGKPEDRAKIISLVTTQLLQFSKHKFASNVV 850
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ + + R V + + + + D+YGNYVIQ L P+ +
Sbjct: 851 EKSITFGSEEEKREIVKVVTTPRSDGNSPLQILMRDQYGNYVIQKLLTLLQGPD----RE 906
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
LV +++ L +L +F YGK +
Sbjct: 907 TLVEQIKPQLQALKKFTYGKQI 928
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 234 YHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLS 291
+ N+K++ Y+ H + + + G + ++ ++ I I N+ L
Sbjct: 602 FRANSKSNKRYELKDIFHHVVEFSGDQHGSRFIQQKLETANSDEKETIFAEIKSNSLQLM 661
Query: 292 RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YI 349
+ GNYV+Q E + + + GH + LSL G VVQ L++ +T +
Sbjct: 662 TDVFGNYVIQKFFEHGNQLQKSILAKQMEGHVLALSLQMYGCRVVQKALEHILTEQQASL 721
Query: 350 VEEFLLNSDQIFRVACDKYGNYVIQTAL 377
V+E + + D+ GN+V+Q A+
Sbjct: 722 VKEL---DGSVLKCVKDQNGNHVVQKAI 746
>gi|302504613|ref|XP_003014265.1| mRNA binding protein Pumilio 2, putative [Arthroderma benhamiae CBS
112371]
gi|291177833|gb|EFE33625.1| mRNA binding protein Pumilio 2, putative [Arthroderma benhamiae CBS
112371]
Length = 883
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 19/287 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ D+ GS+++Q KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 485 IVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQA 544
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ SV +G +++K ++ V L++ +K L +M
Sbjct: 545 QKRLLAQQMQGN---ICSLSVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKC 596
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ N FI A H GC + ++ R
Sbjct: 597 VTNQNGNHVIQKAIERV--PNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADR 654
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL I SL + GNYV+QH++E + I + G + S K S VV
Sbjct: 655 LSILAEIHACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVV 714
Query: 337 QNCLKY-----RITVNYIVEEFLLNSD-QIFRVACDKYGNYVIQTAL 377
+ + + R+ + I+ + + + D+YGNYVIQ +L
Sbjct: 715 EKSITFGTMEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSL 761
>gi|413921571|gb|AFW61503.1| hypothetical protein ZEAMMB73_884166 [Zea mays]
Length = 441
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 202 LDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGC 261
+DLV + + R + + G+ V+ +C+E + F+ A L+ H GC
Sbjct: 215 IDLVHELDGHVMRCVR-DQNGNHVIQKCIECV--PTEHIGFVVSAFQGQVASLSMHPYGC 271
Query: 262 INMNNFIDEMKGPRRKQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLR 320
+ ++ G + Q I+ I +A L+++ GNYV QHVLE + + I L
Sbjct: 272 RVIQRVLEHCGGTSQSQCIVDEILQSACVLAQDQYGNYVTQHVLERGNAHERSQIIIKLA 331
Query: 321 GHYIDLSLTKCGSFVVQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQ 374
G + +S K S V++ C ++ + + IVE+ N D + + D+Y NYV+Q
Sbjct: 332 GQVVTMSQNKFASNVIEKCFQHGDMAERDLLIRQIVEQTEGN-DNLLAMMKDQYANYVVQ 390
Query: 375 TALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHVYNFIK 416
++ET N L LV++++ ++ +LR + YGKH+ + ++
Sbjct: 391 K-ILETCNENQREL---LVSRVKGHMQALRKYTYGKHIVSRVE 429
>gi|302654395|ref|XP_003019005.1| mRNA binding protein Pumilio 2, putative [Trichophyton verrucosum
HKI 0517]
gi|291182695|gb|EFE38360.1| mRNA binding protein Pumilio 2, putative [Trichophyton verrucosum
HKI 0517]
Length = 851
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 19/287 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ D+ GS+++Q KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 453 IVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQA 512
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ SV +G +++K ++ V L++ +K L +M
Sbjct: 513 QKRLLAQQMQGN---ICSLSVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKC 564
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ N FI A H GC + ++ R
Sbjct: 565 VTNQNGNHVIQKAIERV--PNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADR 622
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL I SL + GNYV+QH++E + I + G + S K S VV
Sbjct: 623 LSILAEIHACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVV 682
Query: 337 QNCLKY-----RITVNYIVEEFLLNSD-QIFRVACDKYGNYVIQTAL 377
+ + + R+ + I+ + + + D+YGNYVIQ +L
Sbjct: 683 EKSITFGTMEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSL 729
>gi|429848383|gb|ELA23874.1| mRNA binding protein pumilio [Colletotrichum gloeosporioides Nara
gc5]
Length = 853
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 136/311 (43%), Gaps = 40/311 (12%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
S ++ + D+ GS+++Q+KL + +S D+VF + Q++ + + +V KF E N
Sbjct: 468 SHVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGN 527
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDL---VMKALKRLFR 214
+ Q + Q+ + V S+ + ++K ++ V L++ ++K L+
Sbjct: 528 QVQKKVLASQMKGK---VVDLSMQMYACRVVQKALEHV-----LVEQQAELVKELEPEIV 579
Query: 215 LLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP 274
++ + G+ VV + +E + H +FI + LA H C + ++
Sbjct: 580 KVVKDQNGNHVVQKIIELVPRH--YINFIMDSFRGQVSTLASHMYACRVIQRMLEYGTEQ 637
Query: 275 RRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
++ IL + + SL + GNYVVQH++E P I + + LS K S
Sbjct: 638 DKETILGELHNSTQSLITDQYGNYVVQHIIEHGKPEDRSRIIQLVISQLVTLSKHKFASN 697
Query: 335 VVQNCLKYRITVNYIVEEFLLNSDQIFRVAC-----------DKYGNYVIQT-------- 375
VV+ C+++ EE +QI A D+YGNYVIQ
Sbjct: 698 VVEKCIQFG-----TAEERKGIREQITSQASDGTSSLQLMMKDQYGNYVIQKLLNLIEGS 752
Query: 376 ---ALIETMRP 383
A IE M+P
Sbjct: 753 EREAFIEEMKP 763
>gi|302410901|ref|XP_003003284.1| pumilio domain-containing protein [Verticillium albo-atrum
VaMs.102]
gi|261358308|gb|EEY20736.1| pumilio domain-containing protein [Verticillium albo-atrum
VaMs.102]
Length = 852
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 142/325 (43%), Gaps = 28/325 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S D++F + Q++ + + +V KF E N+
Sbjct: 456 VVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKFFEHGNQV 515
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAV--ANRPPLLDLVMKALKRLFRLLM 217
Q + Q+ + V S+ + ++K ++ V + L+D + + ++ +
Sbjct: 516 QKKVLAAQMKGK---VVDLSMQMYACRVVQKALEHVLVEQQAELVDELQPDIVKVVK--- 569
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ VV + +E + DF+ + LA H GC + ++ ++
Sbjct: 570 -DQNGNHVVQKVIELVPRQ--YIDFVMDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQDKE 626
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
IL + +A L + GNYV QHV++ P + + + LS K S VV+
Sbjct: 627 VILTELHNSAQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSKHKFASNVVE 686
Query: 338 NCLKY-----RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQT-----------ALIET 380
C+++ R ++ + + ++ D+YGNYVIQ A IE
Sbjct: 687 KCIEHGSPEERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQKLLNQLDGGDREAFIEE 746
Query: 381 MRPNSLHLHQRLVTKLQQNLDSLRF 405
M+P + L + + +D L F
Sbjct: 747 MKPQFIALKKTSTGRQIAAIDRLIF 771
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 11/158 (6%)
Query: 224 SVVLQCLEQIYHHNNKNDF--IYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
SV+L+ N + D IY H + + + G + ++ + QI
Sbjct: 431 SVLLEEFRSSSKSNKRYDLKDIYG----HVVEFSGDQHGSRFIQQKLETANSDEKDQIFR 486
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I NA L ++ GNYV+Q E + + + ++G +DLS+ VVQ L+
Sbjct: 487 EIEPNAVQLMKDVFGNYVIQKFFEHGNQVQKKVLAAQMKGKVVDLSMQMYACRVVQKALE 546
Query: 342 YRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ + +V+E + I +V D+ GN+V+Q +
Sbjct: 547 HVLVEQQAELVDELQPD---IVKVVKDQNGNHVVQKVI 581
>gi|358377871|gb|EHK15554.1| hypothetical protein TRIVIDRAFT_165243 [Trichoderma virens Gv29-8]
Length = 308
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 131/282 (46%), Gaps = 19/282 (6%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL S +S ++VF + Q++ + + +V KF E ++ Q +
Sbjct: 35 DQHGSRFIQQKLESANSDEKEQVFREIEPNALQLMKDVFGNYVVQKFFEYGSQLQKKILA 94
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSV 225
++ + V SV + ++K ++ + +L + + R++ + G+ V
Sbjct: 95 EKMKGK---VVDLSVQVYACRVVQKALEHILVEQQA-ELTRELEPEILRVIK-DQNGNHV 149
Query: 226 VLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISV 285
V + +E + DFI A LA H GC + ++ + +I+ +
Sbjct: 150 VQKIIELVPRQ--YIDFIMNAVRGQVTPLASHAYGCRVIQRLLEHGTEADKAEIMGELHA 207
Query: 286 NAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--- 342
+A L + GNYV QHV++ +P E I + G + LS K S VV+ C++Y
Sbjct: 208 SAQILITDQYGNYVAQHVIQNGEPEDRERIIQLVMGQLLTLSKHKFASNVVEKCIEYGTP 267
Query: 343 --RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALI 378
R T+ + + + Q+ R D++GNYVI+ +L+
Sbjct: 268 AQRTTIREQLTTTGADGNNPLQQMMR---DQFGNYVIRKSLV 306
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++Q+ I NA L ++ GNYVVQ E
Sbjct: 28 HAVEFSGDQHGSRFIQQKLESANSDEKEQVFREIEPNALQLMKDVFGNYVVQKFFEYGSQ 87
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ + ++G +DLS+ VVQ L++ I V E +I RV D+ G
Sbjct: 88 LQKKILAEKMKGKVVDLSVQVYACRVVQKALEH-ILVEQQAELTRELEPEILRVIKDQNG 146
Query: 370 NYVIQTAL 377
N+V+Q +
Sbjct: 147 NHVVQKII 154
>gi|346971293|gb|EGY14745.1| pumilio domain-containing protein [Verticillium dahliae VdLs.17]
Length = 825
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 142/325 (43%), Gaps = 28/325 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S D++F + Q++ + + +V KF E N+
Sbjct: 429 VVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKFFEHGNQV 488
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAV--ANRPPLLDLVMKALKRLFRLLM 217
Q + Q+ + V S+ + ++K ++ V + L+D + + ++ +
Sbjct: 489 QKKVLAAQMKGK---VVDLSMQMYACRVVQKALEHVLVEQQAELVDELQPDIVKVVK--- 542
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ VV + +E + DF+ + LA H GC + ++ ++
Sbjct: 543 -DQNGNHVVQKVIELVPRQ--YIDFVMDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQDKE 599
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
IL + +A L + GNYV QHV++ P + + + LS K S VV+
Sbjct: 600 VILTELHNSAQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSKHKFASNVVE 659
Query: 338 NCLKY-----RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQT-----------ALIET 380
C+++ R ++ + + ++ D+YGNYVIQ A IE
Sbjct: 660 KCIEHGSPEERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQKLLNQLDGADREAFIEE 719
Query: 381 MRPNSLHLHQRLVTKLQQNLDSLRF 405
M+P + L + + +D L F
Sbjct: 720 MKPQFIALKKTSTGRQIAAIDRLIF 744
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 11/158 (6%)
Query: 224 SVVLQCLEQIYHHNNKNDF--IYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
SV+L+ N + D IY H + + + G + ++ + QI
Sbjct: 404 SVLLEEFRSSSKSNKRYDLKDIYG----HVVEFSGDQHGSRFIQQKLETANSDEKDQIFR 459
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
I NA L ++ GNYV+Q E + + + ++G +DLS+ VVQ L+
Sbjct: 460 EIEPNAVQLMKDVFGNYVIQKFFEHGNQVQKKVLAAQMKGKVVDLSMQMYACRVVQKALE 519
Query: 342 YRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ + +V+E + I +V D+ GN+V+Q +
Sbjct: 520 HVLVEQQAELVDELQPD---IVKVVKDQNGNHVVQKVI 554
>gi|238494168|ref|XP_002378320.1| mRNA binding protein Pumilio 2, putative [Aspergillus flavus
NRRL3357]
gi|220694970|gb|EED51313.1| mRNA binding protein Pumilio 2, putative [Aspergillus flavus
NRRL3357]
Length = 550
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 155/340 (45%), Gaps = 50/340 (14%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S ++VF + + Q++ + + +V K E N+
Sbjct: 140 VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHGNQT 199
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 200 QKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELEHHVLRC 251
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + F+ A + LA H GC + ++ K R
Sbjct: 252 VRDQNGNHVIQKAIERVPSEHVQ--FVINAFIGQVEKLATHPYGCRVIQRMLEHCKEEDR 309
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+ IL + V A L + GNYV+QHV+ E +D + TI S + + S K S
Sbjct: 310 EAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMS---NLLTYSKHKFAS 366
Query: 334 FVVQNCLKY-RITVNYIVEEFLLNSDQ-----IFRVACDKYGNYVIQT-----------A 376
VV+ +++ + + + + L ++D + + D++GNYVIQ A
Sbjct: 367 NVVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKGAERDA 426
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIK 416
L+E ++P L+++L+ ++ YGK + K
Sbjct: 427 LVEEIKP--------LLSQLK------KYSYGKQIAAIEK 452
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
P +V LE+ + N+K + Y+ H + + + G + ++ ++Q
Sbjct: 109 PSQTVRSPVLEE-FRANSKGNKRYELKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQ 167
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ I ++ L + GNYVVQ + E + + + ++GH + LS G VVQ
Sbjct: 168 VFREIQGDSLQLMTDVFGNYVVQKLFEHGNQTQKKILANQMKGHILALSTQMYGCRVVQK 227
Query: 339 CLKYRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
L++ +T +V+E + R D+ GN+VIQ A+
Sbjct: 228 ALEHILTDQQASMVKEL---EHHVLRCVRDQNGNHVIQKAI 265
>gi|406607197|emb|CCH41458.1| hypothetical protein BN7_999 [Wickerhamomyces ciferrii]
Length = 893
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 157/329 (47%), Gaps = 27/329 (8%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
++D+ GS+++Q++L + +FN + E + +++ + + +V K+ E ++ Q
Sbjct: 562 FSKDQHGSRFIQQQLEISSDEENEVIFNEIREASLELMTDVFGNYVIQKYFEHGSDTQRQ 621
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLV--MKALKRLFRLLMMTK 220
+ Q+ +Q Q S+ +G ++K ++ V PL D + + LK + +
Sbjct: 622 VLLEQMKNQVQHL---SMQMYGCRVVQKAIEYV----PLNDQISIITELKDSIVSCIKDQ 674
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ V+ + +E+I K +FI + +L+ H GC + ++ K ++ IL
Sbjct: 675 NGNHVIQKSIEKIPIE--KIEFILDSLKTQIYHLSTHTYGCRVIQRLLEFSKPKDQEYIL 732
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
++ L ++ GNYV+QH++E P + I ++ G +D S K S VV+ C+
Sbjct: 733 NELNKFTYFLIQDQFGNYVIQHIIEHGKPSERKLIVDTVLGSVVDFSKHKFASNVVEKCV 792
Query: 341 KYRITV--NYIVEEFLLNSDQ-----------IFRVACDKYGNYVIQTALIETMRPNSLH 387
+ + I++E L N+++ + + D++ NYV+Q L++ + +
Sbjct: 793 IFGDDEQRSLILDEVLKNNEKDDDKPVDDRSPLGLMMKDQFANYVVQ-KLVDVTKGSKKK 851
Query: 388 LHQRLVTKLQQNLDSLRFGYGKHVYNFIK 416
+ + + + + + + YGKH+ + K
Sbjct: 852 ILIKKIKQFLKQIS--KTNYGKHLASIEK 878
>gi|327309080|ref|XP_003239231.1| pumilio RBD protein [Trichophyton rubrum CBS 118892]
gi|326459487|gb|EGD84940.1| pumilio RBD protein [Trichophyton rubrum CBS 118892]
Length = 910
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 19/287 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ D+ GS+++Q KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 512 IVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQA 571
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ SV +G +++K ++ V L++ +K L +M
Sbjct: 572 QKRLLAQQMQGN---ICSLSVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKC 623
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ N FI A H GC + ++ R
Sbjct: 624 VTNQNGNHVIQKAIERV--PNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADR 681
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL I SL + GNYV+QH++E + I + G + S K S VV
Sbjct: 682 LSILAEIHACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVV 741
Query: 337 QNCLKY-----RITVNYIVEEFLLNSD-QIFRVACDKYGNYVIQTAL 377
+ + + R+ + I+ + + + D+YGNYVIQ +L
Sbjct: 742 EKSITFGTMEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSL 788
>gi|344234445|gb|EGV66315.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 746
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 148/313 (47%), Gaps = 33/313 (10%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSG-----DSRF--LDKVFNVVSEFTFQIICNQYARFVFG 150
S IL L++D+ G ++LQ+K+ R+ + +FN + +++I + + ++
Sbjct: 137 SDILRLSKDQYGCRFLQKKIDENLISNYSIRYANFEIIFNEIYLNLYELIIDPFGNYLIQ 196
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K I+ + + L + L I Q LF Q S+++ G+ +++K+++++ N P LDL+ LK
Sbjct: 197 KLIKYASNENL-NLMLDIL-QSNLF-QISINQHGTRALQKIIESL-NSPYQLDLLTSGLK 252
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ + L + + FIY + L + +A H+ GC + ++
Sbjct: 253 PFIIELIKDLNGNHVIQKILNKFKPL--QCQFIYDSILNDLITVATHKHGCCVLQKCLNH 310
Query: 271 MKGPRRKQILYLI--SVNAASLSRNFSGNYVVQHVLELEDPYLIETICFS--LRGHYIDL 326
+ + Q + I N L + GNYV+Q+++ + D Y I +S +R I
Sbjct: 311 VTYKQLNQFVNEILNDFNLNKLINDQFGNYVLQYLISIND-YQIHYKFYSNLVRFDMIHY 369
Query: 327 SLTKCGSFVVQNCLKY---------RITVNYI------VEEFLLNSDQIFRVACDKYGNY 371
K S V++ +K + ++++ V L S + ++ D +GNY
Sbjct: 370 CNLKFSSNVIEKFIKNCANNEFKNNEVNIDFVNLKFEMVHHILKTSASLNKLINDPFGNY 429
Query: 372 VIQTALIETMRPN 384
VIQT + PN
Sbjct: 430 VIQTLIDNLTNPN 442
>gi|346327596|gb|EGX97192.1| Armadillo-type fold domain containing protein [Cordyceps militaris
CM01]
Length = 816
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 144/337 (42%), Gaps = 37/337 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q KL S +S D+VF + Q++ + + +V KF E N+
Sbjct: 438 IVEFSGDQHGSRFIQSKLESANSDEKDRVFCEIEPNAIQLMKDVFGNYVIQKFFEHGNQV 497
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD---LVMKALKRLFRLL 216
Q + ++ + V SV + ++K ++ V L++ + K L +
Sbjct: 498 QKKILAEKMRGK---VVDLSVQVYACRVVQKALEHV-----LVEQQAALTKELDPEILRV 549
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ + G+ V+ + +E + DFI A LA H GC + ++ +
Sbjct: 550 IRDQNGNHVIQKIIELVPRQ--YIDFIMDAVRGQVTGLASHTYGCRVIQRMLEHGTDIDK 607
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+I+ + +A L + GNYV QHV++ P + + + + LS K S VV
Sbjct: 608 LEIMTELHASAQILITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFASNVV 667
Query: 337 QNCLKY---------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT-----------A 376
+ C+++ R+ + + + + R D+YGNYVIQ
Sbjct: 668 EKCIEHGTQQQRSAIRVQLTTVGPDGTSPLQLMMR---DQYGNYVIQKLLGQLQGAEKEI 724
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYN 413
L+E ++P L + ++ Q L+ L G G N
Sbjct: 725 LVEEIKPQFYTLKKNGASRQLQALEKL-LGLGNRSDN 760
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + + ++ + ++ I NA L ++ GNYV+Q E +
Sbjct: 437 HIVEFSGDQHGSRFIQSKLESANSDEKDRVFCEIEPNAIQLMKDVFGNYVIQKFFEHGNQ 496
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ + +RG +DLS+ VVQ L++ + L+ +I RV D+ G
Sbjct: 497 VQKKILAEKMRGKVVDLSVQVYACRVVQKALEHVLVEQQAALTKELDP-EILRVIRDQNG 555
Query: 370 NYVIQ 374
N+VIQ
Sbjct: 556 NHVIQ 560
>gi|315053707|ref|XP_003176228.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311338074|gb|EFQ97276.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 914
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 19/287 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ D+ GS+++Q KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 515 IVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQA 574
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ SV +G +++K ++ V L++ +K L +M
Sbjct: 575 QKRLLAQQMQGN---ICSLSVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKC 626
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ N FI A H GC + ++ R
Sbjct: 627 VTNQNGNHVIQKAIERV--PNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADR 684
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL I SL + GNYV+QH++E + I + G + S K S VV
Sbjct: 685 LSILAEIHACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVV 744
Query: 337 QNCLKY-----RITVNYIVEEFLLNSD-QIFRVACDKYGNYVIQTAL 377
+ + + R+ + I+ + + + D+YGNYVIQ +L
Sbjct: 745 EKSITFGTMEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSL 791
>gi|183233559|ref|XP_655386.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801513|gb|EAL49999.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
Length = 528
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 155/333 (46%), Gaps = 41/333 (12%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ-- 160
++++ GS+ +Q+ + G K++ + E ++ + +A +V K IE E +
Sbjct: 217 MSKEHNGSRTVQQSIEKGSEDERQKIWRTLQEHVVELSSDLFANYVIQKAIEFIPESRHI 276
Query: 161 --------LLRITLQITSQDQLFVQASVDKFGSSSIRKLMK--AVANRPPLLDLVMKALK 210
+LR+TL + +G ++K ++ ++ +R L + + K+L
Sbjct: 277 VPQKMKGNVLRLTLHM--------------YGCRVVQKAVEYASMKDRRLLFEELRKSLV 322
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLAC-HEQGCINMNNFID 269
R + G+ V+ +C+E+ + + AL+ + C H GC + I+
Sbjct: 323 RCIE----DQNGNHVIQKCVEK---GDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIE 375
Query: 270 EMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLT 329
+ ++L +I ++ L+ + GNYVVQ+VLE P I ++G+ + LS+
Sbjct: 376 SVDYDCVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMG 435
Query: 330 KCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLH 387
K S V++ C K+ I+EE N+ I ++ D++ NYV+Q +IE + +S
Sbjct: 436 KYSSNVIEKCFKFATQNERQQILEEIYQNNG-ILQMMQDQFANYVVQ-KIIEAI--DSSE 491
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHVYNFIKDCD 419
+ + ++ NL L + Y KH+ N ++ D
Sbjct: 492 REKIVELFIKPNLTILKKVTYTKHILNLLETLD 524
>gi|123509694|ref|XP_001329922.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121912972|gb|EAY17787.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 408
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 120/279 (43%), Gaps = 15/279 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A+D LQ+++ D +FN + +++C+ A FV K E E+Q
Sbjct: 93 MAKDRSDCIQLQDQIARATPTERDTIFNALYPHMGELVCDGAANFVIQKLCENITEEQQS 152
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R+ L +D F+ + G ++K ++ + P +D + AL F L ++ G
Sbjct: 153 RM-LSFFLEDVQFIVDHPN--GCRVLQKFIEQTS--PKNIDPIFLALLPRFVELCSSQNG 207
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ + + + +I N+ I H L GC + D ++
Sbjct: 208 NHIAQRFIIKI---PNRVPEIIDKIKGHVYELVVDNWGCRVIQQLFDRQPIQDLIPLVDE 264
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
+ A +L+ N GNYVVQ++L P I+ + + GH+ + S+ K S V++ C++
Sbjct: 265 VLCRAETLATNQFGNYVVQNILNSGTPEHIQALIRAFTGHFYEFSMHKFASNVIEKCIRK 324
Query: 343 R-------ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQ 374
I I E N +I + D++GNYVIQ
Sbjct: 325 ANQQQQNMIFTEIIGPEENYNKPRIKEMVSDQFGNYVIQ 363
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 6/132 (4%)
Query: 248 LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELE 307
LE ++ H GC + FI++ I + L + +GN++ Q + ++
Sbjct: 159 LEDVQFIVDHPNGCRVLQKFIEQTSPKNIDPIFLALLPRFVELCSSQNGNHIAQRFI-IK 217
Query: 308 DPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYI--VEEFLLNSDQIFRVAC 365
P + I ++GH +L + G V+Q + + I V+E L ++ + A
Sbjct: 218 IPNRVPEIIDKIKGHVYELVVDNWGCRVIQQLFDRQPIQDLIPLVDEVLCRAETL---AT 274
Query: 366 DKYGNYVIQTAL 377
+++GNYV+Q L
Sbjct: 275 NQFGNYVVQNIL 286
>gi|302853691|ref|XP_002958359.1| pumilio family protein [Volvox carteri f. nagariensis]
gi|300256312|gb|EFJ40581.1| pumilio family protein [Volvox carteri f. nagariensis]
Length = 345
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 148/325 (45%), Gaps = 33/325 (10%)
Query: 106 DEQGSQYLQE------KLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
D+ GS+++Q+ KL ++ +D F V ++ + + +V KF+E
Sbjct: 29 DQHGSRFIQQARGGGLKLECVNNEDVDAAFGEVVPRILHLMTDVFGNYVVQKFLEHGTPQ 88
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
I+ + +Q S+ +G ++K ++ V +DLV + + R +
Sbjct: 89 HRACISKALHGH---VLQLSLQMYGCRVVQKALE-VFTEDQQVDLVSELDGHVMRCVR-D 143
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ +C+E + H + L + L+ H GC + ++ ++ RR+
Sbjct: 144 QNGNHVIQKCIECVPTHRIAG--LLDNFLMCVVPLSTHPFGCRIIQRILEHVRDQRRRAA 201
Query: 280 LYLISVNAA-SLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ + AA L+++ GNYV+QHVLE P +I SL + LS+ K S V++
Sbjct: 202 VMADILGAAVQLTQDQYGNYVIQHVLERGTPEEKSSIIGSLSATVVQLSMHKFASNVIEK 261
Query: 339 CLKYRITV--NYIVEEFL--LN----SDQIFRVACDKYGNYVIQTAL---IETMRPNSLH 387
CL + T + I+ L LN + D++GNYV+Q L + R
Sbjct: 262 CLIHGSTADRDLIINRMLGPLNISPKRGPWTAMIKDQFGNYVVQKVLEVCTDVQR----- 316
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHV 411
+ ++ +++ L +L RF YGKH+
Sbjct: 317 --EAMLARVRAQLHALKRFTYGKHI 339
>gi|170596494|ref|XP_001902784.1| RE63138p [Brugia malayi]
gi|158589322|gb|EDP28367.1| RE63138p, putative [Brugia malayi]
Length = 572
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 182/415 (43%), Gaps = 51/415 (12%)
Query: 29 PSYSSFNEIHPSPPVPLYPQSTWAVPSLSGRSTVP----------NLSGTSNPQY----- 73
P SS I P+PP P +ST+A P + + +P N+S S Y
Sbjct: 176 PGSSSGAHI-PAPPAP---RSTYA-PQQNTIAQMPYNVAVHNNRRNISSVSGRGYVSADG 230
Query: 74 ETITSSNFQTPLGFQANPFQHCANSG--ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNV 131
E T S+ NP + G ++ AQD+ GS+++Q+KL + VF+
Sbjct: 231 ERQTRSHLLDDFRNNRNPHLQLIDLGKHVVEFAQDQHGSRFIQQKLERASLKEKQAVFDE 290
Query: 132 VSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKL 191
V+ ++ + + +V KF E +Q +T + + ++ +G I+K
Sbjct: 291 VALHAQSLMTDVFGNYVIQKFFEYGTNEQKNILTNAVKGN---VMSLALQMYGCRVIQKA 347
Query: 192 MKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEH- 250
++++ P ++K ++ + + G+ VV + +E++ ++ FI A +
Sbjct: 348 LESI--EPEQQMEILKEMEGQVLKCVKDQNGNHVVQKVIERV--DASRLQFIIDALVPAG 403
Query: 251 ----CLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLE- 305
L+ H GC + ++ +++ +L + + SL + GNYV+QHV+E
Sbjct: 404 DNMTVCNLSTHPYGCRVIQRVLEHCTDDQKRPVLDQLHKHVKSLIVDQYGNYVIQHVIEH 463
Query: 306 --LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVEEFLLNSDQI- 360
LED + I ++G + + K S V++ CL N ++ E N + I
Sbjct: 464 GSLED---RDRIVNQVKGDVLRFAQHKFASNVIEKCLTCGEPHHKNALITEVCGNPNDIA 520
Query: 361 ---FRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
+ D++ NYV+Q L L ++++ ++ ++ +LR + YGKH+
Sbjct: 521 TPLLMMMKDQFANYVVQKMLDVA----DSALRKKMMLAIKPHIPALRKYNYGKHI 571
>gi|71983283|ref|NP_495523.3| Protein PUF-8 [Caenorhabditis elegans]
gi|351065107|emb|CCD66262.1| Protein PUF-8 [Caenorhabditis elegans]
Length = 535
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 158/377 (41%), Gaps = 51/377 (13%)
Query: 63 PNLSGT-SNPQYETITSSNFQTPLGFQANPFQ------HCANSGILLLAQDEQGSQYLQE 115
P+ +G SNP E T+ + T ++ANP +L A+D+ GS+++Q+
Sbjct: 157 PSATGIFSNPYREPTTTDDLLT--RYRANPAMMKNLKLSDIRGALLKFAKDQVGSRFIQQ 214
Query: 116 KLTSGDSRF-LDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQL 174
+L S RF D +F+ V +++ + + +V KF E E R+ D +
Sbjct: 215 ELASSKDRFEKDSIFDEVVSNADELVDDIFGNYVVQKFFEYGEERHWARLV------DAI 268
Query: 175 FVQASVDKFGSSSIRKLMKAVAN-RPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQI 233
+ F + R L KA+ PL ++ ++ + M + G+ VV + +E++
Sbjct: 269 IDRVPEYAFQMYACRVLQKALEKINEPLQIKILSQIRHVIHRCMKDQNGNHVVQKAIEKV 328
Query: 234 YHHNNKNDFIYQAALE--HCLY-LACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASL 290
+ FI LE + +Y ++ GC + ++ + K ++ I +
Sbjct: 329 SPQYVQ--FIVDTLLESSNTIYEMSVDPYGCRVVQRCLEHCSPSQTKPVIGQIHKRFDEI 386
Query: 291 SRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIV 350
+ N GNYVVQHV+E I + + + + K S V++ CL+
Sbjct: 387 ANNQYGNYVVQHVIEHGSEEDRMVIVTRVSNNLFEFATHKYSSNVIEKCLE--------- 437
Query: 351 EEFLLNSDQIFRVAC---------------DKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
+ + + I AC D+Y NYV+Q + + + L+
Sbjct: 438 QGAVYHKSMIVGAACHHQEGSVPIVVQMMKDQYANYVVQKMFDQV----TSEQRRELILT 493
Query: 396 LQQNLDSLR-FGYGKHV 411
++ ++ LR F +GKH+
Sbjct: 494 VRPHIPVLRQFPHGKHI 510
>gi|443699258|gb|ELT98839.1| hypothetical protein CAPTEDRAFT_180493 [Capitella teleta]
Length = 632
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 110/243 (45%), Gaps = 7/243 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q+KL VFN + + ++ + + +V KF E +
Sbjct: 235 VVEFSQDQHGSRFIQQKLERALPAEKSMVFNEILSAAYSLMTDVFGNYVIQKFFEFGTSE 294
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I+K ++++ + + ++K L +
Sbjct: 295 QKQTLAQRVRGH---VLPLALQMYGCRVIQKALESIPSE--MQVEIVKELDGHVLKCVKD 349
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + F+ A L+ H GC + ++ + +
Sbjct: 350 QNGNHVVQKCIECV--EPKQLQFLIDAFKGQVFTLSTHPYGCRVIQRILEHCVSEQTNPV 407
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + V+ L ++ GNYV+QHVLE P I LRG + LS K S VV+ C
Sbjct: 408 LDELHVHTERLVQDQYGNYVIQHVLEHGRPEDKSKIVSELRGRVLVLSQHKFASNVVEKC 467
Query: 340 LKY 342
+ Y
Sbjct: 468 VTY 470
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 118/256 (46%), Gaps = 17/256 (6%)
Query: 166 LQITSQDQLFVQASVDKFGSSSIR-KLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSS 224
LQ+ V+ S D+ GS I+ KL +A+ P +V + LM G+
Sbjct: 226 LQLKDLANHVVEFSQDQHGSRFIQQKLERAL---PAEKSMVFNEILSAAYSLMTDVFGNY 282
Query: 225 VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
V+ + E + + + + Q H L LA GC + ++ + + +I+ +
Sbjct: 283 VIQKFFE--FGTSEQKQTLAQRVRGHVLPLALQMYGCRVIQKALESIPSEMQVEIVKELD 340
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
+ ++ +GN+VVQ +E +P ++ + + +G LS G V+Q L++ +
Sbjct: 341 GHVLKCVKDQNGNHVVQKCIECVEPKQLQFLIDAFKGQVFTLSTHPYGCRVIQRILEHCV 400
Query: 345 T--VNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDS 402
+ N +++E ++++ R+ D+YGNYVIQ L E RP ++V++L+ +
Sbjct: 401 SEQTNPVLDELHVHTE---RLVQDQYGNYVIQHVL-EHGRPED---KSKIVSELRGRV-- 451
Query: 403 LRFGYGKHVYNFIKDC 418
L K N ++ C
Sbjct: 452 LVLSQHKFASNVVEKC 467
>gi|378730303|gb|EHY56762.1| hypothetical protein HMPREF1120_04829 [Exophiala dermatitidis
NIH/UT8656]
Length = 907
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 146/330 (44%), Gaps = 33/330 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ S+++Q KL + +S +++F + Q++ + + +V K E N+
Sbjct: 548 VVEFSGDQHASRFIQLKLETANSDEKEQIFKEIQPNVLQLMTDVFGNYVIQKLFEHGNQA 607
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLF----RL 215
Q + Q+ +Q S+ +G ++K V L D +K L ++
Sbjct: 608 QKKALANQMKGH---VLQLSMQMYGCRVVQKAFDHV-----LTDQQASLVKELDGPNQQI 659
Query: 216 LMMTKP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
L + K G+ VV + +E+I + + FI A L ++ H+ GC + ++ +
Sbjct: 660 LKVVKDNNGNHVVQKAIERIPGEHIQ--FIVDAHRGQMLKMSTHQYGCRVVQRMLEHCRP 717
Query: 274 PRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGS 333
++ IL + + L + GNYVVQH+++ +P+ + + H + S K S
Sbjct: 718 EAKRAILDELLEHTLPLISDSFGNYVVQHIIQNGEPHDRRRVVDVVLQHVLAFSKHKFAS 777
Query: 334 FVVQNCLKYRIT--VNYIVEEFLLNSDQ----IFRVACDKYGNYVIQ-----------TA 376
+V+ +++ + I+ +Q +F + D+YGNYV+Q +A
Sbjct: 778 NIVEKSIEHADADQRSQILHTLTAPDEQGNTPVFGLMKDQYGNYVLQKVHDQLQGAELSA 837
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLRFG 406
L E M+ N L + K ++ L +G
Sbjct: 838 LREDMKRNFPALRRTSYGKQVMAMEKLLYG 867
>gi|225683895|gb|EEH22179.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 932
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 144/322 (44%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q L S +S DKVF + + Q++ + + +V K E N+
Sbjct: 510 IVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNYVVQKLFEHGNQS 569
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 570 QKRILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKC 621
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A LA H GC + ++ R
Sbjct: 622 VKDQNGNHVIQKAVERVPTVHIQ--FIINAFKGQVNRLAAHPYGCRVIQRMLEHCNEGDR 679
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + +ASL + GNYV+QH+LE + + I + + S K S VV
Sbjct: 680 QAILAELHSCSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNVV 739
Query: 337 QNCLKYRIT--VNYIVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ +++ I++ +D+ + + D+YGNYVIQ L + +
Sbjct: 740 EKSIEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKGSE----RE 795
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
LV++++ L L +F YGK +
Sbjct: 796 NLVSQIEPQLIHLKKFSYGKQI 817
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
VV L + + NNKN+ Y+ H + + + G + + ++ + ++
Sbjct: 482 VVRSPLLEEFRTNNKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDKVFRE 541
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I +N+ L + GNYVVQ + E + + ++GH + LS G VVQ L++
Sbjct: 542 IQLNSLQLMTDVFGNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEH 601
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 602 ILTDQQASMVKEL---ENHVLKCVKDQNGNHVIQKAV 635
>gi|226293282|gb|EEH48702.1| mRNA binding protein Pumilio 2 [Paracoccidioides brasiliensis Pb18]
Length = 958
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 144/322 (44%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q L S +S DKVF + + Q++ + + +V K E N+
Sbjct: 536 IVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNYVVQKLFEHGNQS 595
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 596 QKRILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKC 647
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A LA H GC + ++ R
Sbjct: 648 VKDQNGNHVIQKAVERVPTVHIQ--FIINAFKGQVNRLAAHPYGCRVIQRMLEHCNEGDR 705
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + +ASL + GNYV+QH+LE + + I + + S K S VV
Sbjct: 706 QAILAELHSCSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNVV 765
Query: 337 QNCLKYRIT--VNYIVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ +++ I++ +D+ + + D+YGNYVIQ L + +
Sbjct: 766 EKSIEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKGSE----RE 821
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
LV++++ L L +F YGK +
Sbjct: 822 NLVSQIEPQLIHLKKFSYGKQI 843
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
VV L + + NNKN+ Y+ H + + + G + + ++ + ++
Sbjct: 508 VVRSPLLEEFRTNNKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDKVFRE 567
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I +N+ L + GNYVVQ + E + + ++GH + LS G VVQ L++
Sbjct: 568 IQLNSLQLMTDVFGNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEH 627
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 628 ILTDQQASMVKEL---ENHVLKCVKDQNGNHVIQKAV 661
>gi|357445831|ref|XP_003593193.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482241|gb|AES63444.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 601
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I L+A+D+ G ++LQ G + +FN + +++ + + ++ K ++
Sbjct: 427 ARGCIYLMAKDQNGGRFLQRMFDEGRMEDIQMIFNEIIGHVVELMMSPFGNYLIRKLLDV 486
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
C+E+Q ++I L + + V+ S++ G+ ++KL++ + + + LV+ AL+ F +
Sbjct: 487 CSEEQRMQIILMVIQEPGQLVRISLNTHGTRVVQKLIETLKTKQQ-VSLVVSALEPGFLI 545
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFI 243
L+ G+ VV CLE + + +NK F+
Sbjct: 546 LIKDNNGNHVVQHCLEYLRNGDNKTKFL 573
>gi|409194216|gb|AFV31434.1| pumilio [Hydractinia echinata]
Length = 979
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 13/258 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VFN + + ++ + + +V KF E + +
Sbjct: 729 IVEFSQDQHGSRFIQQKLERASILEKNMVFNEILTAAYSLMTDVFGNYVIQKFFEFGSPE 788
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q L + +I + ++ +G I+K ++ + PP + + + ++ L ++
Sbjct: 789 QKLLLAQRIKGH---VLPLALQMYGCRVIQKALETI---PPEMTIHSELVRELDGHVLKC 842
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ VV +C+E + + + FI A L+ H GC + ++ +
Sbjct: 843 VKDQNGNHVVQKCIECV--DSVQLQFIIDAFQGQVFALSTHPYGCRVIQRILEHCTTEQT 900
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL + + L ++ GNYV+QHVLE TI +RG+ + LS K S V+
Sbjct: 901 SPILGELHEHTERLIQDQYGNYVIQHVLEHGSADDKSTIVNIVRGNVLLLSQHKFASNVI 960
Query: 337 QNCLKY--RITVNYIVEE 352
+ C+ + R + ++EE
Sbjct: 961 EKCVSHASRAERSMLIEE 978
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 292 RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYI 349
++ +GN+VVQ +E D ++ I + +G LS G V+Q L++ T + I
Sbjct: 844 KDQNGNHVVQKCIECVDSVQLQFIIDAFQGQVFALSTHPYGCRVIQRILEHCTTEQTSPI 903
Query: 350 VEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+ E +++++ + D+YGNYVIQ L
Sbjct: 904 LGELHEHTERLIQ---DQYGNYVIQHVL 928
>gi|449488821|ref|XP_004176337.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1, partial
[Taeniopygia guttata]
Length = 1076
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 16/291 (5%)
Query: 99 GILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNE 158
G +++ QG ++Q KL VFN + + +Q++ + + +V KF E +
Sbjct: 717 GFIMVISGTQG--FIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSL 774
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
+Q L + +I + ++ +G I+K ++ + P + +++ L +
Sbjct: 775 EQKLALAERIRGH---VLSLALQMYGCRVIQKALEFIP--PDQQNEMVRELDGHVLKCVK 829
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
+ G+ VV +C+E + + + FI A L H GC + ++ +
Sbjct: 830 DQNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALXTHPYGCRVIQRILEHCLPEQTLP 887
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
IL + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+
Sbjct: 888 ILEELLQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 947
Query: 339 CLKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRP 383
C+ + R +++E +D ++ + D+Y NYV+Q +I+ P
Sbjct: 948 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEP 997
>gi|190345122|gb|EDK36946.2| hypothetical protein PGUG_01044 [Meyerozyma guilliermondii ATCC
6260]
Length = 618
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 148/304 (48%), Gaps = 32/304 (10%)
Query: 100 ILLLAQDEQGSQYLQEKL-----TSGDSRF--LDKVFNVVSEFTFQIICNQYARFVFGKF 152
IL LA+D+ G ++LQ+K+ ++ R D +F+ VS +++I + + ++ K
Sbjct: 109 ILSLAKDQYGCRFLQKKIDEHVVSNAQQRRANFDVIFSQVSPNMYELIIDPFGNYLVQKL 168
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL 212
I C+E ITL + S Q S+++ G+ +++K++ AV+N+ L L++ L
Sbjct: 169 IAYCSEQ---NITLILESLSYNLFQISINQHGTRALQKIIDAVSNKYQ-LTLIVNGLSPY 224
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
L+ G+ V+ + L + + + FIY + ++ L +A H+ GC + ++ +
Sbjct: 225 IIELIKDLNGNHVIQKILNK--YPADDCQFIYDSIIKDLLVVATHKHGCCVLQKCLNHVT 282
Query: 273 GPRRKQI---LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFS--LRGHYIDLS 327
+ Q + + ++ F GNYV+Q+++ + + I F+ +R +L
Sbjct: 283 TEQLSQFSARILTFEIFIKLINDQF-GNYVLQYLISI-NSLPINRAVFNNFVRFGVSNLC 340
Query: 328 LTKCGSFVVQNCLKYRITVNYIVEEF----------LLNSDQIFRVACDKYGNYVIQTAL 377
K S VV+ LK I + F +L SD + ++ D YGNYV+QT L
Sbjct: 341 KLKFSSNVVEKFLKNCFNNEPISDAFSCLKYDLCYQILISD-LNKMINDPYGNYVVQT-L 398
Query: 378 IETM 381
IE +
Sbjct: 399 IEVI 402
>gi|449708558|gb|EMD47999.1| pumilio, putative, partial [Entamoeba histolytica KU27]
Length = 499
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 155/333 (46%), Gaps = 41/333 (12%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ-- 160
++++ GS+ +Q+ + G K++ + E ++ + +A +V K IE E +
Sbjct: 188 MSKEHNGSRTVQQSIEKGSEDERQKIWRTLQEHVVELSSDLFANYVIQKAIEFIPESRHI 247
Query: 161 --------LLRITLQITSQDQLFVQASVDKFGSSSIRKLMK--AVANRPPLLDLVMKALK 210
+LR+TL + +G ++K ++ ++ +R L + + K+L
Sbjct: 248 VPQKMKGNVLRLTLHM--------------YGCRVVQKAVEYASMKDRRLLFEELRKSLV 293
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLAC-HEQGCINMNNFID 269
R + G+ V+ +C+E+ + + AL+ + C H GC + I+
Sbjct: 294 RCIE----DQNGNHVIQKCVEK---GDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIE 346
Query: 270 EMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLT 329
+ ++L +I ++ L+ + GNYVVQ+VLE P I ++G+ + LS+
Sbjct: 347 SVDYDCVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMG 406
Query: 330 KCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLH 387
K S V++ C K+ I+EE N+ I ++ D++ NYV+Q +IE + +S
Sbjct: 407 KYSSNVIEKCFKFATQNERQQILEEIYQNNG-ILQMMQDQFANYVVQ-KIIEAI--DSSE 462
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHVYNFIKDCD 419
+ + ++ NL L + Y KH+ N ++ D
Sbjct: 463 REKIVELFIKPNLTILKKVTYTKHILNLLETLD 495
>gi|312075892|ref|XP_003140618.1| hypothetical protein LOAG_05033 [Loa loa]
Length = 607
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 150/327 (45%), Gaps = 29/327 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ AQD+ GS+++Q+KL + VF+ V+ ++ + + +V KF E +
Sbjct: 264 VVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVFGNYVIQKFFEYGTTE 323
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +T + + ++ +G I+K ++++ P ++K ++ +
Sbjct: 324 QKNILTNAVKGN---VMSLALQMYGCRVIQKALESI--EPKQQMEILKEMEGQVLKCVKD 378
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEH-----CLYLACHEQGCINMNNFIDEMKGP 274
+ G+ VV + +E++ ++ FI A + L+ H GC + ++
Sbjct: 379 QNGNHVVQKVIERV--DASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDE 436
Query: 275 RRKQILYLISVNAASLSRNFSGNYVVQHVLE---LEDPYLIETICFSLRGHYIDLSLTKC 331
+++ +L + + SL + GNYV+QHV+E LED + I ++G + + K
Sbjct: 437 QKRPVLDQLHKHVKSLIVDQYGNYVIQHVIEHGSLED---RDRIVNQVKGDVLHFAQHKF 493
Query: 332 GSFVVQNCLKYRIT--VNYIVEEFLLNSDQI----FRVACDKYGNYVIQTALIETMRPNS 385
S V++ CL N ++ E N + I + D++ NYV+Q L
Sbjct: 494 ASNVIEKCLTCGEPHHKNALITEVCGNPNDIATPLLMMMKDQFANYVVQKMLDVA----D 549
Query: 386 LHLHQRLVTKLQQNLDSLR-FGYGKHV 411
L ++++ ++ ++ +LR + YGKH+
Sbjct: 550 SALRKKMMLAIKPHIPALRKYNYGKHI 576
>gi|393907055|gb|EJD74503.1| puf domain-containing protein 9 [Loa loa]
Length = 731
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 150/327 (45%), Gaps = 29/327 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ AQD+ GS+++Q+KL + VF+ V+ ++ + + +V KF E +
Sbjct: 388 VVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVFGNYVIQKFFEYGTTE 447
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +T + + ++ +G I+K ++++ P ++K ++ +
Sbjct: 448 QKNILTNAVKGN---VMSLALQMYGCRVIQKALESI--EPKQQMEILKEMEGQVLKCVKD 502
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEH-----CLYLACHEQGCINMNNFIDEMKGP 274
+ G+ VV + +E++ ++ FI A + L+ H GC + ++
Sbjct: 503 QNGNHVVQKVIERV--DASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDE 560
Query: 275 RRKQILYLISVNAASLSRNFSGNYVVQHVLE---LEDPYLIETICFSLRGHYIDLSLTKC 331
+++ +L + + SL + GNYV+QHV+E LED + I ++G + + K
Sbjct: 561 QKRPVLDQLHKHVKSLIVDQYGNYVIQHVIEHGSLED---RDRIVNQVKGDVLHFAQHKF 617
Query: 332 GSFVVQNCLKYRIT--VNYIVEEFLLNSDQI----FRVACDKYGNYVIQTALIETMRPNS 385
S V++ CL N ++ E N + I + D++ NYV+Q L
Sbjct: 618 ASNVIEKCLTCGEPHHKNALITEVCGNPNDIATPLLMMMKDQFANYVVQKMLDVA----D 673
Query: 386 LHLHQRLVTKLQQNLDSLR-FGYGKHV 411
L ++++ ++ ++ +LR + YGKH+
Sbjct: 674 SALRKKMMLAIKPHIPALRKYNYGKHI 700
>gi|28394605|gb|AAO38522.1| pumilio RBD [Schistocerca americana]
Length = 322
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 9/255 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ G +++Q+KL VF+ + + ++ + + +V KF E +
Sbjct: 59 IVEFSQDQHGPRFIQQKLERATVAEKQMVFSEILAAAYNLMTDVFGNYVIQKFFEFGTPE 118
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + ++ +G I++ +++++ P + +++ L +
Sbjct: 119 QKTTLAQKVRGH---VLPLALQMYGCRVIQRALESIS--PEQQEEIVRELDGHVLKCVKD 173
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + H + FI A L+ H GC + ++ + I
Sbjct: 174 QNGNHVVQKCIECVDPHALQ--FIINAFSGQVFALSTHPYGCRVIQRILEHCTPEQTAPI 231
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I S+RG + LS K S VV+ C
Sbjct: 232 LEELHRHTEQLIQDQYGNYVIQHVLEHGKPEDKSQIILSVRGKVLVLSQHKFASNVVEKC 291
Query: 340 LKY--RITVNYIVEE 352
+ + R ++EE
Sbjct: 292 VTHATRAERAVLIEE 306
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 243 IYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQH 302
+ Q H L LA GC + ++ + ++++I+ + + ++ +GN+VVQ
Sbjct: 123 LAQKVRGHVLPLALQMYGCRVIQRALESISPEQQEEIVRELDGHVLKCVKDQNGNHVVQK 182
Query: 303 VLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQI 360
+E DP+ ++ I + G LS G V+Q L++ I+EE +++Q+
Sbjct: 183 CIECVDPHALQFIINAFSGQVFALSTHPYGCRVIQRILEHCTPEQTAPILEELHRHTEQL 242
Query: 361 FRVACDKYGNYVIQTAL 377
+ D+YGNYVIQ L
Sbjct: 243 IQ---DQYGNYVIQHVL 256
>gi|358391961|gb|EHK41365.1| hypothetical protein TRIATDRAFT_147678 [Trichoderma atroviride IMI
206040]
Length = 415
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 143/321 (44%), Gaps = 36/321 (11%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q+KL + +S +++F + Q++ + + +V KF E ++ Q +
Sbjct: 35 DQHGSRFIQQKLETANSDEKEQIFREIEPNALQLMKDVFGNYVVQKFFEYGSQLQKKILA 94
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSV 225
++ + V SV + ++K ++ + +L + + R++ + G+ V
Sbjct: 95 EKMKGK---VVDLSVQVYACRVVQKALEHILVEQQA-ELTRELEPEILRVIK-DQNGNHV 149
Query: 226 VLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISV 285
V + +E + DFI A LA H GC + ++ + +I+ +
Sbjct: 150 VQKIIELVPRQ--YIDFIMNAVRGQVTPLASHAYGCRVIQRLLEHGTEEDKAEIMGELHA 207
Query: 286 NAASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
+A L + GNYV QHV+ ELED E I + G + LS K S VV+ C+++
Sbjct: 208 SAQILITDQYGNYVAQHVIQNGELEDR---ERIIQLVMGQLLTLSKHKFASNVVEKCIEF 264
Query: 343 RITVNY-IVEEFLLNS--------DQIFRVACDKYGNYVIQT-----------ALIETMR 382
+ E L + Q+ R D++GNYVIQ AL+E ++
Sbjct: 265 GTPAQRTTIREQLTTAGPDGNNPLQQMMR---DQFGNYVIQKMLGQLQGEERDALVEEIK 321
Query: 383 PNSLHLHQRLVTKLQQNLDSL 403
P +L + ++ Q L+ L
Sbjct: 322 PQFYNLKKSGASRQLQALEKL 342
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++QI I NA L ++ GNYVVQ E
Sbjct: 28 HAVEFSGDQHGSRFIQQKLETANSDEKEQIFREIEPNALQLMKDVFGNYVVQKFFEYGSQ 87
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ + ++G +DLS+ VVQ L++ I V E +I RV D+ G
Sbjct: 88 LQKKILAEKMKGKVVDLSVQVYACRVVQKALEH-ILVEQQAELTRELEPEILRVIKDQNG 146
Query: 370 NYVIQ 374
N+V+Q
Sbjct: 147 NHVVQ 151
>gi|67475695|ref|XP_653533.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56470496|gb|EAL48147.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449704716|gb|EMD44904.1| pumilio family RNA-binding protein, putative [Entamoeba histolytica
KU27]
Length = 484
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 173/401 (43%), Gaps = 34/401 (8%)
Query: 33 SFNEIHPSPPVPLY---PQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPL-GFQ 88
SF++ + SP + T +P S V NL + Q T ++ P+ Q
Sbjct: 86 SFDQWNNSPSIKQINSPSTKTTTIPIESHSPGVCNLRASPRVQTLINTPPAYKKPIPNIQ 145
Query: 89 ANPFQHCANSGILL-----------LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTF 137
++ S IL L +D+QGS+ +Q+ L + ++++F + + +F
Sbjct: 146 GKYYKSPKQSNILSTVMPKSHTVADLCKDQQGSRRIQQFLDTAQPNEIEELFEFIIKDSF 205
Query: 138 QIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVAN 197
+++ + + +V K IE + + I V+ S+ +G I+K + ++
Sbjct: 206 ELMTDLFGNYVIQKLIEYGTIEHKHQFMEIIKGH---VVELSLHTYGCRVIQKACEFISG 262
Query: 198 RPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACH 257
L ++ + +K + + G+ V+ + +E + + + I + + + H
Sbjct: 263 EE--LGIIAEEIKGHIVEFVEDQNGNHVIQKFIE--FMPSTYSSLIANEISGYIISFSKH 318
Query: 258 EQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICF 317
GC + I+ + + I + N L+ N GNYV+QH+LE + +
Sbjct: 319 AYGCRVVQKLIERKEPLIQNVITSELKNNIWDLAVNQYGNYVIQHLLENGNQQQHNLVIS 378
Query: 318 SLRGHYIDLSLTKCGSFVVQNCLKYRITV--NYIVEEFLLNSDQ--IFRVACDKYGNYVI 373
++G + + S+ K S VV+ C+ + + ++E D + ++ D Y NYVI
Sbjct: 379 EMKGKFCEYSMKKYSSNVVEKCVHCCTSAQRDNFIDEICSKKDNEMLLKLMKDPYANYVI 438
Query: 374 QTALIETMRPN--SLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
QT L+E M + S + Q ++ N+ SL R Y KH+
Sbjct: 439 QT-LVEVMDDDQRSKFIEQNILP----NVSSLRRVSYSKHL 474
>gi|67474034|ref|XP_652766.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56469651|gb|EAL47380.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449702370|gb|EMD43022.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 438
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 148/320 (46%), Gaps = 26/320 (8%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE--TCNEDQ 160
L +D+QGS+ +Q+ +D++F ++ + +++ + + +V K +E T
Sbjct: 125 LCKDQQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLVEYGTKKHVH 184
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
LL LQ V+ S+ +G I+K+++ ++ P + ++ +K + +
Sbjct: 185 LLFEKLQGN-----VVKLSLHMYGCRVIQKIIEVLS--PEEVRIISSEIKSNVSTFIEDQ 237
Query: 221 PGSSVVLQCLE--QIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
G+ V+ + ++ N D IY A+E+ + H GC + I++ K+
Sbjct: 238 NGNHVIQKFIDFASEIDLNFMIDEIYTRAVEY----SKHPYGCRVIQRLIEKNSQNCVKR 293
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ + LS N GNYV+QH+++ I +++G + S+ K S VV+
Sbjct: 294 VTDKLVEYVWELSINQYGNYVIQHLIQYGTNEQRVEIVNNIKGKLYEYSMKKYSSNVVEK 353
Query: 339 CLK------YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
C++ I VN + + N QI + CD Y NYVIQ LIE M N + +
Sbjct: 354 CIRCCETREQTILVNELCNSNVTNK-QINEMICDPYANYVIQ-RLIEMMDFNQKNYF--I 409
Query: 393 VTKLQQNLDSLRFG-YGKHV 411
T + N+DSLR + KH+
Sbjct: 410 ETFISPNIDSLRRNTHAKHL 429
>gi|380488307|emb|CCF37468.1| hypothetical protein CH063_08789 [Colletotrichum higginsianum]
Length = 821
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 132/309 (42%), Gaps = 40/309 (12%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S D+VF + Q++ + + +V KF E N+
Sbjct: 437 VVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGNQV 496
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLF-RLLMM 218
Q + Q+ + V S+ + ++K ++ V L++ + +K L +L +
Sbjct: 497 QKKVLASQMKGK---VVDLSMQMYACRVVQKALEHV-----LVEQQAELVKELEPEILKV 548
Query: 219 TKP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
K G+ VV + +E + DF+ + LA H C + ++ +
Sbjct: 549 VKDQNGNHVVQKIIELVPRQ--YIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTEQDK 606
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + + L + GNYVVQH++E I + + LS K S VV
Sbjct: 607 ETILAELHSSTQVLITDQYGNYVVQHIIEHGKSEDRSRIIQLVIAQLVTLSKHKFASNVV 666
Query: 337 QNCLKYRITVNYIVEEFLLNSDQIFRVAC-----------DKYGNYVIQT---------- 375
+ C++Y EE +QI A D+YGNYVIQ
Sbjct: 667 EKCIQYG-----TAEERKGIREQIISHAADGTSSLQLMMKDQYGNYVIQKLLNQLEGAER 721
Query: 376 -ALIETMRP 383
A +E MRP
Sbjct: 722 EAFVEEMRP 730
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 2/155 (1%)
Query: 221 PGSSVVLQCLEQIYHHNNKND-FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
PG V LE+ + N + + H + + + G + ++ + Q+
Sbjct: 406 PGKGVRSLLLEEFRSSSKSNKRYELKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQV 465
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
I NA L ++ GNYV+Q E + + + ++G +DLS+ VVQ
Sbjct: 466 FREIEPNAIQLMKDVFGNYVIQKFFEHGNQVQKKVLASQMKGKVVDLSMQMYACRVVQKA 525
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQ 374
L++ + V E +I +V D+ GN+V+Q
Sbjct: 526 LEH-VLVEQQAELVKELEPEILKVVKDQNGNHVVQ 559
>gi|378756380|gb|EHY66404.1| hypothetical protein NERG_00044 [Nematocida sp. 1 ERTm2]
Length = 461
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 138/323 (42%), Gaps = 29/323 (8%)
Query: 66 SGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFL 125
S +S P E + F+ F + + I +++D++GS+++Q+KL + +
Sbjct: 114 SFSSTPAAEPLKDQFFEEVYAFAKKRGISSSENLICAISKDQEGSRFIQKKLDGASAEEI 173
Query: 126 DKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGS 185
F + + +I + + +V KF+E +Q +I ++ + + ++ +G
Sbjct: 174 AMTFEEICPWIGDLIADLFGNYVVQKFLEIGTHEQREKI---FSAMEGTIIPLALHMYGC 230
Query: 186 SSIRKLMKAV-ANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIY 244
I+K ++ NR +++ +K L+ + G+ VV +C+E + +DF+
Sbjct: 231 RVIQKALECKDINRK-----IVERIKGHVIDLVCDQNGNHVVQKCVECV-----DSDFVI 280
Query: 245 QAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL 304
+ E + L+ H GC + + + + I NA L + GNYV+QH+L
Sbjct: 281 KEFEEDAVSLSRHRYGCRVIQRIFE--NSTKCASAIDKIISNAKLLVEDQYGNYVIQHIL 338
Query: 305 ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLL--------- 355
E I L + + S K S V++ C+ I + +L
Sbjct: 339 EKGTHAHKRKIITDLSDNIAEYSTHKFASNVMEKCV---ICGTMEDRKHMLKQLKSAVGP 395
Query: 356 -NSDQIFRVACDKYGNYVIQTAL 377
D + + DK+GNYVIQ L
Sbjct: 396 SGEDMLIHITMDKFGNYVIQRLL 418
>gi|407037210|gb|EKE38557.1| pumilio family RNA-binding protein [Entamoeba nuttalli P19]
Length = 438
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 148/320 (46%), Gaps = 26/320 (8%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE--TCNEDQ 160
L +D+QGS+ +Q+ +D++F ++ + +++ + + +V K +E T
Sbjct: 125 LCKDQQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLVEHGTKKHVH 184
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
LL LQ V+ S+ +G I+K+++ ++ P + ++ +K + +
Sbjct: 185 LLFEKLQGN-----VVKLSLHMYGCRVIQKIIEVLS--PEEVRIISSEIKSNVSTFIEDQ 237
Query: 221 PGSSVVLQCLE--QIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
G+ V+ + ++ N D IY A+E+ + H GC + I++ K+
Sbjct: 238 NGNHVIQKFIDFASEIDLNFMIDEIYTKAVEY----SKHPYGCRVIQRLIEKNSQNCVKR 293
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ + LS N GNYV+QH+++ I +++G + S+ K S VV+
Sbjct: 294 VTDKLVEYVWELSINQYGNYVIQHLIQYGTNEQRVEIVNNIKGKLYEYSMKKYSSNVVEK 353
Query: 339 CLK------YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
C++ I VN + + N QI + CD Y NYVIQ LIE M N + +
Sbjct: 354 CIRCCETREQIILVNELCNSNVTNK-QINEMICDPYANYVIQ-RLIEMMDFNQKNYF--I 409
Query: 393 VTKLQQNLDSLRFG-YGKHV 411
T + N+DSLR + KH+
Sbjct: 410 ETFISPNIDSLRRNTHAKHL 429
>gi|425773915|gb|EKV12240.1| mRNA binding protein Pumilio 2, putative [Penicillium digitatum
PHI26]
gi|425782417|gb|EKV20327.1| mRNA binding protein Pumilio 2, putative [Penicillium digitatum
Pd1]
Length = 904
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 148/326 (45%), Gaps = 32/326 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 493 VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQT 552
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 553 QKKILANQMRGH---VLALSTQMYGCRVVQKALEHI-----LTDQQAAMVKELENHVLKC 604
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A LA H GC + ++ + R
Sbjct: 605 VRDQNGNHVIQKAIERVPSQHVQ--FIINAFRGQVNRLAAHPYGCRVIQRMLEHCEEVDR 662
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + ++L + GNYV+QHV+E D + + G + S K S VV
Sbjct: 663 QSILAELHACTSNLIPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAYSKHKFASNVV 722
Query: 337 QNCLKY-----RITVNYIVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLH 387
+ +++ RI +I+ +D+ + + D+YGNYVIQ L + H
Sbjct: 723 EKSIEFGAEHERI---HIISTLTSANDRGESPLLGLMRDQYGNYVIQKVLGQLK-----H 774
Query: 388 LHQR-LVTKLQQNLDSL-RFGYGKHV 411
+ + L+ +++ L L +F YGK +
Sbjct: 775 VEREALIDQIKPLLGQLKKFSYGKQI 800
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
VV L + + N+K + Y+ H + + + G + ++ ++Q+
Sbjct: 465 VVRSPLLEEFRANSKGNKRYELKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFRE 524
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I N L + GNYVVQ + E + + + +RGH + LS G VVQ L++
Sbjct: 525 IQPNCLQLMTDVFGNYVVQKLFEHGNQTQKKILANQMRGHVLALSTQMYGCRVVQKALEH 584
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 585 ILTDQQAAMVKEL---ENHVLKCVRDQNGNHVIQKAI 618
>gi|240280462|gb|EER43966.1| mRNA binding protein Pumilio 2 [Ajellomyces capsulatus H143]
Length = 900
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 128/290 (44%), Gaps = 25/290 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q L S +S D+VF + Q++ + + +V K E N+
Sbjct: 545 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 604
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 605 QKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKC 656
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A LA H GC + ++ P R
Sbjct: 657 VKDQNGNHVIQKAVERVPSVHIQ--FIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPDR 714
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+ +L + +SL + GNYV+QHV+ E D I +I S + S K S
Sbjct: 715 RAVLEELHACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVIS---QLLVFSKHKFAS 771
Query: 334 FVVQNCLKYRITVNY--IVEEFLLNSDQ----IFRVACDKYGNYVIQTAL 377
VV+ +++ I+ + +D+ + + D+YGNYVIQ L
Sbjct: 772 NVVEKSIEFGADDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVL 821
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
VV L + + NNKN+ Y+ H + + + G + + ++ + Q+
Sbjct: 517 VVRSPLLEEFRTNNKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFRE 576
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I N L + GNYVVQ + E + + + ++GH + LS G VVQ L++
Sbjct: 577 IQPNCLQLMTDVFGNYVVQKLFEHGNQSQKKILANQMKGHILALSTQMYGCRVVQKALEH 636
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 637 ILTDQQASMVKEL---ENHVLKCVKDQNGNHVIQKAV 670
>gi|344234446|gb|EGV66316.1| hypothetical protein CANTEDRAFT_118702 [Candida tenuis ATCC 10573]
Length = 453
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 148/313 (47%), Gaps = 33/313 (10%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSG-----DSRF--LDKVFNVVSEFTFQIICNQYARFVFG 150
S IL L++D+ G ++LQ+K+ R+ + +FN + +++I + + ++
Sbjct: 92 SDILRLSKDQYGCRFLQKKIDENLISNYSIRYANFEIIFNEIYLNLYELIIDPFGNYLIQ 151
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K I+ + + L + L I Q LF Q S+++ G+ +++K+++++ N P LDL+ LK
Sbjct: 152 KLIKYASNENL-NLMLDIL-QSNLF-QISINQHGTRALQKIIESL-NSPYQLDLLTSGLK 207
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ + L + + FIY + L + +A H+ GC + ++
Sbjct: 208 PFIIELIKDLNGNHVIQKILNKFKPL--QCQFIYDSILNDLITVATHKHGCCVLQKCLNH 265
Query: 271 MKGPRRKQIL--YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFS--LRGHYIDL 326
+ + Q + L N L + GNYV+Q+++ + D Y I +S +R I
Sbjct: 266 VTYKQLNQFVNEILNDFNLNKLINDQFGNYVLQYLISIND-YQIHYKFYSNLVRFDMIHY 324
Query: 327 SLTKCGSFVVQNCLKY---------RITVNYI------VEEFLLNSDQIFRVACDKYGNY 371
K S V++ +K + ++++ V L S + ++ D +GNY
Sbjct: 325 CNLKFSSNVIEKFIKNCANNEFKNNEVNIDFVNLKFEMVHHILKTSASLNKLINDPFGNY 384
Query: 372 VIQTALIETMRPN 384
VIQT + PN
Sbjct: 385 VIQTLIDNLTNPN 397
>gi|156064143|ref|XP_001597993.1| hypothetical protein SS1G_00079 [Sclerotinia sclerotiorum 1980]
gi|154690941|gb|EDN90679.1| hypothetical protein SS1G_00079 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 964
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 154/337 (45%), Gaps = 39/337 (11%)
Query: 92 FQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGK 151
+QH ++ + D+ GS+++Q+KL + +S +++F + Q++ + + +V K
Sbjct: 561 YQH-----VVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQK 615
Query: 152 FIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKR 211
E N+ Q + Q+ + ++ S+ +G ++K ++ V L D + +K
Sbjct: 616 LFEHGNQVQKRVLAEQMKNH---VMELSMQMYGCRVVQKALEHV-----LADQQAELVKE 667
Query: 212 LFRLLMM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
L ++ + G+ VV + +E++ + + FI +A LA H GC + +
Sbjct: 668 LEADVLKCVKDQNGNHVVQKAIERVPTEHIQ--FIIEAFRGQVHILATHPYGCRVIQRIL 725
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
+ + ++++L + A++L + GNYV QHV++ P I + + LS
Sbjct: 726 EYCQPRDQERVLEELHQCASNLITDQYGNYVTQHVIQHGKPEDRAKIIKIVTAQLLTLSK 785
Query: 329 TKCGSFVVQNCLKY-----RITVNYIVEEFLLNSDQIFRVAC---DKYGNYVIQ------ 374
K S VV+ +++ R T+ ++ L+SD + D+YGNYVIQ
Sbjct: 786 HKFASNVVEKSIQFGTDEQRHTIVSLLT--ALHSDGTSPLQLMMKDQYGNYVIQKLLGQL 843
Query: 375 -----TALIETMRPNSLHLHQRLVTKLQQNLDSLRFG 406
A +E ++P L L + K ++ L +G
Sbjct: 844 KGAERAAFVEDLKPQLLALKKYNYGKQIAAIEKLIYG 880
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 243 IYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQH 302
IYQ H + + + G + ++ ++Q+ I NA L + GNYV+Q
Sbjct: 560 IYQ----HVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQK 615
Query: 303 VLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNY--IVEEFLLNSDQI 360
+ E + + ++ H ++LS+ G VVQ L++ + +V+E L +D +
Sbjct: 616 LFEHGNQVQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVKE--LEAD-V 672
Query: 361 FRVACDKYGNYVIQTAL 377
+ D+ GN+V+Q A+
Sbjct: 673 LKCVKDQNGNHVVQKAI 689
>gi|310789326|gb|EFQ24859.1| hypothetical protein GLRG_00003 [Glomerella graminicola M1.001]
Length = 821
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 30/304 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S D+VF + Q++ + + +V KF E N+
Sbjct: 437 VVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGNQV 496
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLF-RLLMM 218
Q + Q+ + V S+ + ++K ++ V L++ + +K L +L +
Sbjct: 497 QKKVLASQMKGK---VVDLSMQMYACRVVQKALEHV-----LVEQQAELVKELEPEILKV 548
Query: 219 TKP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
K G+ VV + +E + DF+ + LA H C + ++ +
Sbjct: 549 VKDQNGNHVVQKIIELVPRQ--YIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTDQDK 606
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + + L + GNYVVQH++E I + + +S K S VV
Sbjct: 607 ETILAELHNSTQVLITDQYGNYVVQHIIEHGKSEDRSRIIQLVIAQLVTMSKHKFASNVV 666
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT-----------ALIE 379
+ C++Y + I+ + + + + D+YGNYVIQ A +E
Sbjct: 667 EKCIQYGSAEERKGIREQIISQSADGTSSLQLMMKDQYGNYVIQKLLNQLDGPEREAFVE 726
Query: 380 TMRP 383
MRP
Sbjct: 727 EMRP 730
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 2/155 (1%)
Query: 221 PGSSVVLQCLEQIYHHNNKND-FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
PG V LE+ + N + + H + + + G + ++ + Q+
Sbjct: 406 PGKGVRSLLLEEFRSSSKSNKRYELKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQV 465
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
I NA L ++ GNYV+Q E + + + ++G +DLS+ VVQ
Sbjct: 466 FREIEPNAIQLMKDVFGNYVIQKFFEHGNQVQKKVLASQMKGKVVDLSMQMYACRVVQKA 525
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQ 374
L++ + V E +I +V D+ GN+V+Q
Sbjct: 526 LEH-VLVEQQAELVKELEPEILKVVKDQNGNHVVQ 559
>gi|407397270|gb|EKF27682.1| pumilio protein, putative [Trypanosoma cruzi marinkellei]
Length = 827
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 115/237 (48%), Gaps = 12/237 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
AQD++GS+++Q + S +D +F+ + E ++ + + +V K +E N QL
Sbjct: 418 FAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQLA 477
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ + V ++ +G I+K ++ + P LD+++ LK + + G
Sbjct: 478 HAATRLQNN---VVSLTLQTYGCRVIQKCIEVMP--PEGLDIILAELKGNVAKCIQDQNG 532
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ VV +C+E + FI A + LA H GC + + P ++++++
Sbjct: 533 NHVVQKCVEVT---PQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHC--PDQEEVIFS 587
Query: 283 -ISVNAASLSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
I +L+++ GNYV+QHVL+ ++D + + +L+ + + S K S V++
Sbjct: 588 EILKCVDTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKNDFYEFSKQKFASNVME 644
>gi|146423478|ref|XP_001487667.1| hypothetical protein PGUG_01044 [Meyerozyma guilliermondii ATCC
6260]
Length = 618
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 148/304 (48%), Gaps = 32/304 (10%)
Query: 100 ILLLAQDEQGSQYLQEKL-----TSGDSRF--LDKVFNVVSEFTFQIICNQYARFVFGKF 152
IL LA+D+ G ++LQ+K+ ++ R D +F+ VS +++I + + ++ K
Sbjct: 109 ILSLAKDQYGCRFLQKKIDEHVVSNAQQRRANFDVIFSQVSPNMYELIIDPFGNYLVQKL 168
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL 212
I C+E ITL + S Q S+++ G+ +++K++ AV+N+ L L++ L
Sbjct: 169 IAYCSEQ---NITLILESLLYNLFQISINQHGTRALQKIIDAVSNKYQ-LTLIVNGLSPY 224
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
L+ G+ V+ + L + + + FIY + ++ L +A H+ GC + ++ +
Sbjct: 225 IIELIKDLNGNHVIQKILNK--YPADDCQFIYDSIIKDLLVVATHKHGCCVLQKCLNHVT 282
Query: 273 GPRRKQI---LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFS--LRGHYIDLS 327
+ Q + + ++ F GNYV+Q+++ + + I F+ +R +L
Sbjct: 283 TEQLSQFSARILTFEIFIKLINDQF-GNYVLQYLISI-NSLPINRAVFNNFVRFGVSNLC 340
Query: 328 LTKCGSFVVQNCLKYRITVNYIVEEF----------LLNSDQIFRVACDKYGNYVIQTAL 377
K S VV+ LK I + F +L SD + ++ D YGNYV+QT L
Sbjct: 341 KLKFSSNVVEKFLKNCFNNEPISDAFSCLKYDLCYQILISD-LNKMINDPYGNYVVQT-L 398
Query: 378 IETM 381
IE +
Sbjct: 399 IEVI 402
>gi|25150422|ref|NP_508980.2| Protein PUF-9 [Caenorhabditis elegans]
gi|351061611|emb|CCD69461.1| Protein PUF-9 [Caenorhabditis elegans]
Length = 703
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 163/362 (45%), Gaps = 32/362 (8%)
Query: 63 PNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDS 122
PN S + P+ N QTP Q + ++ A+D+ GS+++Q+KL
Sbjct: 317 PNFS-QNPPRRRGPEDPNGQTPKTLQD------IKNNVIEFAKDQHGSRFIQQKLERASL 369
Query: 123 RFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDK 182
R +F V E +++ + + +V KF E N +Q ++ I ++ ++
Sbjct: 370 RDKAAIFTPVLENAEELMTDVFGNYVIQKFFEFGNNEQRNQLVGTIRGN---VMKLALQM 426
Query: 183 FGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDF 242
+G I+K ++ V + ++ ++ + + G+ V+ + +E++ + F
Sbjct: 427 YGCRVIQKALEYVEEK--YQHEILGEMEGQVLKCVKDQNGNHVIQKVIERV--EPERLQF 482
Query: 243 IYQAAL----EHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNY 298
I A ++ L+ H GC + ++ +++ +L + ++ L + GNY
Sbjct: 483 IIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNEEQKQPVLDALQIHLKQLVLDQYGNY 542
Query: 299 VVQHVLELEDPYLIETICFS-LRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLL 355
V+QHV+E P E I + + + K S V++ CL + N I+++
Sbjct: 543 VIQHVIEHGSPSDKEQIVQDVISDDLLKFAQHKFASNVIEKCLTFGGHAERNLIIDKVCG 602
Query: 356 N----SDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT-KLQQNLDSLR-FGYGK 409
+ S + ++ D + NYV+Q +++ P H++ +T ++ ++ +LR + +GK
Sbjct: 603 DPNDPSPPLLQMMKDPFANYVVQK-MLDVADPQ----HRKKITLTIKPHIATLRKYNFGK 657
Query: 410 HV 411
H+
Sbjct: 658 HI 659
>gi|35186936|gb|AAQ84130.1| pumilio protein 1 [Trypanosoma cruzi]
Length = 827
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
AQD++GS+++Q + S +D +F+ + E ++ + + +V K +E N QL
Sbjct: 418 FAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQLA 477
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ + V ++ +G I+K ++ + P LD+++ LK + + G
Sbjct: 478 HAATRLQNN---VVSLTLQTYGCRVIQKCIEVMP--PEGLDIILAELKGNVAKCIQDQNG 532
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY- 281
+ VV +C+E + FI A + LA H GC + + P ++++++
Sbjct: 533 NHVVQKCVEVT---PQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHC--PDQEEVIFS 587
Query: 282 --LISVNAASLSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
L V+ +L+++ GNYV+QHVL+ ++D + + +L+ + + S K S V++
Sbjct: 588 EILKCVD--TLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVME 644
>gi|71411474|ref|XP_807985.1| pumilio/PUF RNA binding protein 6 [Trypanosoma cruzi strain CL
Brener]
gi|70872096|gb|EAN86134.1| pumilio/PUF RNA binding protein 6, putative [Trypanosoma cruzi]
Length = 827
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
AQD++GS+++Q + S +D +F+ + E ++ + + +V K +E N QL
Sbjct: 418 FAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQLA 477
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ + V ++ +G I+K ++ + P LD+++ LK + + G
Sbjct: 478 HAATRLQNN---VVSLTLQTYGCRVIQKCIEVMP--PEGLDIILAELKGNVAKCIQDQNG 532
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY- 281
+ VV +C+E + FI A + LA H GC + + P ++++++
Sbjct: 533 NHVVQKCVEVT---PQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHC--PDQEEVIFS 587
Query: 282 --LISVNAASLSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
L V+ +L+++ GNYV+QHVL+ ++D + + +L+ + + S K S V++
Sbjct: 588 EILKCVD--TLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVME 644
>gi|407834788|gb|EKF99041.1| pumilio protein, putative [Trypanosoma cruzi]
Length = 827
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
AQD++GS+++Q + S +D +F+ + E ++ + + +V K +E N QL
Sbjct: 418 FAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQLA 477
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ + V ++ +G I+K ++ + P LD+++ LK + + G
Sbjct: 478 HAATRLQNN---VVSLTLQTYGCRVIQKCIEVMP--PEGLDIILAELKGNVAKCIQDQNG 532
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY- 281
+ VV +C+E + FI A + LA H GC + + P ++++++
Sbjct: 533 NHVVQKCVEVT---PQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHC--PDQEEVIFS 587
Query: 282 --LISVNAASLSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
L V+ +L+++ GNYV+QHVL+ ++D + + +L+ + + S K S V++
Sbjct: 588 EILKCVD--TLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVME 644
>gi|347836748|emb|CCD51320.1| similar to pumilio domain-containing protein [Botryotinia
fuckeliana]
Length = 964
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 146/319 (45%), Gaps = 35/319 (10%)
Query: 92 FQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGK 151
+QH ++ + D+ GS+++Q+KL + +S +++F + Q++ + + +V K
Sbjct: 561 YQH-----VVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQK 615
Query: 152 FIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKR 211
E N+ Q + Q+ + ++ S+ +G ++K ++ V L D + +K
Sbjct: 616 LFEHGNQVQKRVLAEQMKNH---VMELSMQMYGCRVVQKALEHV-----LADQQAELVKE 667
Query: 212 LFRLLMM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
L ++ + G+ VV + +E++ + + FI +A LA H GC + +
Sbjct: 668 LEADVLKCVKDQNGNHVVQKAIERVPTEHIQ--FIIEAFRGQVHVLATHPYGCRVIQRIL 725
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
+ + ++++L + A++L + GNYV QHV++ P I + + LS
Sbjct: 726 EYCQPRDQERVLEELHQCASNLITDQYGNYVTQHVIQHGKPEDRAKIVKIVTAQLLTLSK 785
Query: 329 TKCGSFVVQNCLKY-----RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQ-------- 374
K S VV+ +++ R T+ ++ + ++ D+YGNYVIQ
Sbjct: 786 HKFASNVVEKSIQFGTDEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLKG 845
Query: 375 ---TALIETMRPNSLHLHQ 390
A +E ++P L L +
Sbjct: 846 AERNAFVEDLKPQLLALKK 864
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 243 IYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQH 302
IYQ H + + + G + ++ ++Q+ I NA L + GNYV+Q
Sbjct: 560 IYQ----HVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQK 615
Query: 303 VLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNY--IVEEFLLNSDQI 360
+ E + + ++ H ++LS+ G VVQ L++ + +V+E L +D +
Sbjct: 616 LFEHGNQVQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVKE--LEAD-V 672
Query: 361 FRVACDKYGNYVIQTAL 377
+ D+ GN+V+Q A+
Sbjct: 673 LKCVKDQNGNHVVQKAI 689
>gi|154298974|ref|XP_001549908.1| hypothetical protein BC1G_11734 [Botryotinia fuckeliana B05.10]
Length = 964
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 146/319 (45%), Gaps = 35/319 (10%)
Query: 92 FQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGK 151
+QH ++ + D+ GS+++Q+KL + +S +++F + Q++ + + +V K
Sbjct: 561 YQH-----VVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQK 615
Query: 152 FIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKR 211
E N+ Q + Q+ + ++ S+ +G ++K ++ V L D + +K
Sbjct: 616 LFEHGNQVQKRVLAEQMKNH---VMELSMQMYGCRVVQKALEHV-----LADQQAELVKE 667
Query: 212 LFRLLMM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
L ++ + G+ VV + +E++ + + FI +A LA H GC + +
Sbjct: 668 LEADVLKCVKDQNGNHVVQKAIERVPTEHIQ--FIIEAFRGQVHVLATHPYGCRVIQRIL 725
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
+ + ++++L + A++L + GNYV QHV++ P I + + LS
Sbjct: 726 EYCQPRDQERVLEELHQCASNLITDQYGNYVTQHVIQHGKPEDRAKIVKIVTAQLLTLSK 785
Query: 329 TKCGSFVVQNCLKY-----RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQ-------- 374
K S VV+ +++ R T+ ++ + ++ D+YGNYVIQ
Sbjct: 786 HKFASNVVEKSIQFGTDEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLKG 845
Query: 375 ---TALIETMRPNSLHLHQ 390
A +E ++P L L +
Sbjct: 846 AERNAFVEDLKPQLLALKK 864
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 243 IYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQH 302
IYQ H + + + G + ++ ++Q+ I NA L + GNYV+Q
Sbjct: 560 IYQ----HVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQK 615
Query: 303 VLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNY--IVEEFLLNSDQI 360
+ E + + ++ H ++LS+ G VVQ L++ + +V+E L +D +
Sbjct: 616 LFEHGNQVQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVKE--LEAD-V 672
Query: 361 FRVACDKYGNYVIQTAL 377
+ D+ GN+V+Q A+
Sbjct: 673 LKCVKDQNGNHVVQKAI 689
>gi|406861814|gb|EKD14867.1| pumilio domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 948
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 127/284 (44%), Gaps = 19/284 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q +L + +S +++F + Q++ + + +V K E N+
Sbjct: 550 VVEFSGDQHGSRFIQNRLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGNQV 609
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + ++ S+ +G ++K ++ V L D + + L ++
Sbjct: 610 QKRVLAEQMKNH---VLELSLQMYGCRVVQKALEHV-----LADQQAELAQELRADVLKC 661
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ VV + +E++ + + FI +A LA H GC + ++ K +
Sbjct: 662 VKDQNGNHVVQKAIERVPTEHVR--FIIEAFRGQVHTLAVHPYGCRVIQRILEYCKPHEQ 719
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL + A L + GNYV QHV+E P + + ++LS K S VV
Sbjct: 720 VGILEELHQCTAMLITDQYGNYVTQHVIEHGQPEDQAKVIRIVTSQLLELSKHKFASNVV 779
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQ 374
+ C+++ R VN + + + D YGNYVIQ
Sbjct: 780 EKCIEFGTHEQRRAIVNTVNHVHSNGISPLQLMIKDPYGNYVIQ 823
>gi|397646257|gb|EJK77194.1| hypothetical protein THAOC_00992 [Thalassiosira oceanica]
Length = 743
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 239 KNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNY 298
+ FI+ A +A H GC + +D R ++ I + L ++ GNY
Sbjct: 396 RTQFIFDAVAASVEDVARHRHGCCVIQRCLDSRHSAARSHLVDRIVEKSLELMQDAYGNY 455
Query: 299 VVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY---RITVNYIVEEFLL 355
VVQ+VL++ + IC S+ G L++ K S V++ CL+ R+ Y+ E L
Sbjct: 456 VVQYVLDVCGDDEVHAICESVVGKVCVLAVQKFSSNVMEKCLERCTDRVREEYLNE--LN 513
Query: 356 NSDQIFRVACDKYGNYVIQTA-----------LIETMRPN 384
+SD++ + D +GNYV+Q A L+ETM+P+
Sbjct: 514 DSDRLRELMMDPFGNYVVQRALSVSTHAQAIRLVETMKPH 553
>gi|134107804|ref|XP_777513.1| hypothetical protein CNBB0870 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260205|gb|EAL22866.1| hypothetical protein CNBB0870 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 673
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 126/295 (42%), Gaps = 38/295 (12%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ A D+ GS+++Q+KL + K+F+ + +Q++ + + +V K E + D
Sbjct: 298 IVEFAGDQHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVTQKMFE--HGD 355
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANR----------PPLLDLVMKA- 208
QL + L D +Q S+ +G ++K + + N P +L+ V +
Sbjct: 356 QLQKAAL-AKKMDGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECVKSSN 414
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ + ++ T P S+ + FI H LA H GC +
Sbjct: 415 ANHVVQRIINTGPPQSI-------------PDSFI-----GHVEELAKHPYGCRVLQKTF 456
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
+ + ++ +L + SL+ + GNYV+Q V+ + P + LRG +
Sbjct: 457 ENLDDKMKRSLLDEMHKCVISLTEDQFGNYVIQSVITVGKPEDRNKVISQLRGRVTTFAR 516
Query: 329 TKCGSFVVQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
K S VV+ L + R+ ++ ++ L ++Q+ + D Y N+ +QT +
Sbjct: 517 HKFASNVVEKALIHADPADRRVLIDELIGMQLDGTNQVGMLLRDAYANFPLQTGM 571
>gi|118378471|ref|XP_001022411.1| Pumilio-family RNA binding repeat containing protein [Tetrahymena
thermophila]
gi|89304178|gb|EAS02166.1| Pumilio-family RNA binding repeat containing protein [Tetrahymena
thermophila SB210]
Length = 977
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 138/337 (40%), Gaps = 33/337 (9%)
Query: 105 QDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRI 164
+D+ S+ +Q++ + +K+F + ++ +Q+ +V K E + ++
Sbjct: 555 KDQNSSRTIQKQFENSTIEEKNKIFERIQPEALNLMKDQFGNYVIQKLFEKGTIEHKEKL 614
Query: 165 TLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSS 224
I Q S+ +G I+K ++ + RP + + +++ L + + G+
Sbjct: 615 YYIIKGN---VEQLSLHTYGCRVIQKALEELKERPQMQEGLIQELNNKIMTCIQDQNGNH 671
Query: 225 VVLQCLEQIYHHN----------------------NKNDFIYQAALEHCLYLACHEQGCI 262
V+ +C E + NKN F YQ E LA H GC
Sbjct: 672 VIQKCFETLSSSKLTTIINEVIQNVNLELQNKYLFNKNKF-YQKIEE----LAFHPYGCR 726
Query: 263 NMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGH 322
+ ++ P K+I + N L GNY++Q+++E + I ++ H
Sbjct: 727 VIQRILEFCSNPETKKIYEKLMTNLIRLCECQYGNYIIQYIIEKGQKLEKDEILQVVKVH 786
Query: 323 YIDLSLTKCGSFVVQNCLKYRI-TVNYIVEEFLL--NSDQIFRVACDKYGNYVIQTALIE 379
++DLSL K S V + + Y V + LL N+ + + +GNYV+Q +
Sbjct: 787 FVDLSLNKFASNVTEKSIVYSDEEFKAGVLDVLLRPNNQNHLELTKNAFGNYVVQRLYEK 846
Query: 380 TMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIK 416
L + Q L+ + + +GKHV ++I+
Sbjct: 847 AQHETKLRVCQYLLQNNDVYNEVISNSFGKHVLSYIE 883
>gi|308510969|ref|XP_003117667.1| CRE-PUF-9 protein [Caenorhabditis remanei]
gi|308238313|gb|EFO82265.1| CRE-PUF-9 protein [Caenorhabditis remanei]
Length = 714
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 163/362 (45%), Gaps = 32/362 (8%)
Query: 63 PNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDS 122
PN S + P+ N Q+P Q + ++ A+D+ GS+++Q+KL
Sbjct: 332 PNFS-QNPPRRRGPEDPNGQSPRTLQD------IKNNVIEFAKDQHGSRFIQQKLERASI 384
Query: 123 RFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDK 182
R +F V E +++ + + +V KF E N +Q + I ++ ++
Sbjct: 385 RDKAVIFTPVLEHAEELMTDVFGNYVIQKFFEFGNNEQRNLLVGTIRGN---VMKLALQM 441
Query: 183 FGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDF 242
+G I+K ++ V + ++ ++ + + G+ V+ + +E++ ++ F
Sbjct: 442 YGCRVIQKALEYVEEK--YQHEILGEMEGQVLKCVKDQNGNHVIQKVIERV--EPDRLQF 497
Query: 243 IYQAAL----EHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNY 298
I A ++ L+ H GC + ++ +++ +L ++++ L + GNY
Sbjct: 498 IIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNDEQKQPVLDALNLHLKQLVLDQYGNY 557
Query: 299 VVQHVLELEDPYLIETICFS-LRGHYIDLSLTKCGSFVVQNCLKY------RITVNYIVE 351
V+QHV+E P E I + + + K S V++ CL + I ++ +
Sbjct: 558 VIQHVIEHGSPKDKEQIVQDVINDDLLKYAQHKFASNVIEKCLTFGGDAERNIIIDKVCG 617
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT-KLQQNLDSLR-FGYGK 409
+ S + ++ D + NYV+Q +++ P H++ +T ++ ++ +LR + +GK
Sbjct: 618 DPNDPSPPLLQMMKDPFANYVVQK-MLDVADPQ----HRKKITLTIKPHIATLRKYNFGK 672
Query: 410 HV 411
H+
Sbjct: 673 HI 674
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 114/273 (41%), Gaps = 34/273 (12%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ LA G + +Q+ L + ++ ++ + + + +Q V K IE D
Sbjct: 434 VMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQVLKCVKDQNGNHVIQKVIERVEPD 493
Query: 160 QLLRITLQIT--SQDQLFVQASVDKFGSSSIRKLMKAVAN--RPPLLDLVMKALKRLFRL 215
+L I T + D ++ SV +G I+++++ + + P+LD AL +
Sbjct: 494 RLQFIIDAFTKNNSDNVYT-LSVHPYGCRVIQRVLEYCNDEQKQPVLD----ALNLHLKQ 548
Query: 216 LMMTKPGSSVVLQCLE--------QIYHHNNKNDFIYQA-------ALEHCLYLACHEQG 260
L++ + G+ V+ +E QI +D + A +E CL G
Sbjct: 549 LVLDQYGNYVIQHVIEHGSPKDKEQIVQDVINDDLLKYAQHKFASNVIEKCLTFG----G 604
Query: 261 CINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLR 320
N ID++ G L+ + ++ NYVVQ +L++ DP + I +++
Sbjct: 605 DAERNIIIDKVCGDPNDPSPPLLQ-----MMKDPFANYVVQKMLDVADPQHRKKITLTIK 659
Query: 321 GHYIDLSLTKCGSFVVQNCLK-YRITVNYIVEE 352
H L G +++ +K Y + ++ I E
Sbjct: 660 PHIATLRKYNFGKHILRKYIKIYLMELSLITPE 692
>gi|295666323|ref|XP_002793712.1| mRNA binding protein Pumilio 2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278006|gb|EEH33572.1| mRNA binding protein Pumilio 2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 947
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 143/322 (44%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q L S +S D+VF + + Q++ + + +V K E N+
Sbjct: 536 IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQLNSLQLMTDVFGNYVVQKLFEHGNQS 595
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 596 QKRILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKC 647
Query: 218 -MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI A LA H GC + ++ R
Sbjct: 648 VKDQNGNHVIQKAVERVPTVHIQ--FIINAFKGQVHRLAAHPYGCRVIQRMLEHCNEGDR 705
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + +A L + GNYV+QH+LE + + I + + S K S VV
Sbjct: 706 QAILAELHSCSAGLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNVV 765
Query: 337 QNCLKYRIT--VNYIVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ +++ I++ +D+ + + D+YGNYVIQ L + +
Sbjct: 766 EKSIEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKGSE----RE 821
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
LV++++ L L +F YGK +
Sbjct: 822 NLVSQIEPQLIHLKKFSYGKQI 843
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
VV L + + NNKN+ Y+ H + + + G + + ++ + Q+
Sbjct: 508 VVRSPLLEEFRTNNKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFRE 567
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I +N+ L + GNYVVQ + E + + ++GH + LS G VVQ L++
Sbjct: 568 IQLNSLQLMTDVFGNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEH 627
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 628 ILTDQQASMVKEL---ENHVLKCVKDQNGNHVIQKAV 661
>gi|449019193|dbj|BAM82595.1| similar to translational repressor pumilio [Cyanidioschyzon merolae
strain 10D]
Length = 1506
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 73/337 (21%), Positives = 147/337 (43%), Gaps = 36/337 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q KL + + V V +++ + + +V K +E
Sbjct: 1031 IVEFSTDQHGSRFIQTKLETATPDQVGWVLQEVLAEMNRLVTDVFGNYVVQKLLEHGTAR 1090
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
L I +++ ++ + S+ +G +++K ++ + +LV++ + + +
Sbjct: 1091 DLQAIAMKLKNR---ILALSLHMYGCRAVQKALEVLPASTQA-ELVIELDGHVLKCIR-D 1145
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ +C+E++ + + FI A + LA H GC + ++ ++ I
Sbjct: 1146 QNGNHVIQKCIERVPGQHVQ--FIVDAVRGQAVSLAEHSYGCRVIQRILEYSPEEQKVPI 1203
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ I +L R+ GNYV+QHV+E I +R I +S K S VV+ C
Sbjct: 1204 MREIMQACRTLIRDQYGNYVIQHVVEHGKEEERAHILRMVRDQCISMSQHKYASNVVERC 1263
Query: 340 LKYRITVNY--IVEEFLLNSD----------------------QIFRVACDKYGNYVIQT 375
L++ + +++ L SD + + D++GNYV+Q
Sbjct: 1264 LQHGSPADRKALIDILLGRSDVAGSGSGGGGSSGATALPRNSVPLIDLVQDQFGNYVVQR 1323
Query: 376 ALIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
L Q+ L+ NL+ + RF YGKH+
Sbjct: 1324 VLDVAGDEQ----RQQAAELLRANLNVIKRFSYGKHI 1356
>gi|167392498|ref|XP_001740184.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165895862|gb|EDR23451.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 437
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 162/361 (44%), Gaps = 29/361 (8%)
Query: 65 LSGTSNPQYETITSSNFQ---TPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGD 121
++ +N Q T++S T FQ N + L +D+QGS+ +Q+
Sbjct: 83 ITKNNNEQILTLSSRVLDLMNTQPSFQKKLLNKNKNYSLPELCKDQQGSRKIQQFFEIAT 142
Query: 122 SRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE--TCNEDQLLRITLQITSQDQLFVQAS 179
+D++F ++ + +++ + + +V K +E T LL LQ V+ S
Sbjct: 143 EEEIDQIFRLIYSDSIELMIDLFGNYVIQKLLEHGTKKHVHLLFEKLQGN-----VVKLS 197
Query: 180 VDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLE--QIYHHN 237
+ +G I+K+++ +++ + ++ +K + + G+ V+ + ++ N
Sbjct: 198 LHMYGCRVIQKILEVLSSEE--VRIISAEIKSNVSTFIEDQNGNHVIQKFIDFASEIDLN 255
Query: 238 NKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGN 297
D IY A+E+ + H GC + I++ K++ + LS N GN
Sbjct: 256 FMIDEIYTKAVEY----SKHPYGCRVIQRLIEKNSQNCVKRVTDKLVEYVWELSINQYGN 311
Query: 298 YVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK------YRITVNYIVE 351
YV+QH+++ I +++G + S+ K S VV+ C++ I VN +
Sbjct: 312 YVIQHLIQYGTNEQRIKIVNNIKGKLYEYSMKKYSSNVVEKCIRCCESREQIILVNELCN 371
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFG-YGKH 410
+ N QI + CD Y NYVIQ LIE M N + + T + N+D+LR + KH
Sbjct: 372 SNVTNK-QINEMICDPYANYVIQ-RLIEMMDANQKNYF--IETFISPNIDALRRNTHAKH 427
Query: 411 V 411
+
Sbjct: 428 L 428
>gi|398021567|ref|XP_003863946.1| pumilio protein, putative [Leishmania donovani]
gi|322502180|emb|CBZ37263.1| pumilio protein, putative [Leishmania donovani]
Length = 837
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 117/237 (49%), Gaps = 12/237 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
A+D++GS+++Q + + LD +F+ + E +++ + + +V K ++ N QL
Sbjct: 414 FAKDQEGSRFIQSAVDTASPESLDVLFHEIFESPLELVTDIFGNYVLQKLLDKGNTPQLT 473
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ V+ ++ +G I+K ++ + + LD+++ LK + + G
Sbjct: 474 FAAERMCGH---VVELTMQTYGCRVIQKCIEVMPSAG--LDIILAELKDNVAKCIQDQNG 528
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+E I + FI A + LA H GC + + P ++ ++
Sbjct: 529 NHVIQKCVEVI---PQRCGFIISAFSGRVMELATHAYGCRVIQCIMQHC--PEQEDTIFN 583
Query: 283 ISVNAAS-LSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
+ A L+++ GNYV+QHVL+ ++D IE++ +L+ + LS K S V++
Sbjct: 584 ELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVYAALKPKFFYLSKQKFASNVME 640
>gi|146097730|ref|XP_001468199.1| putative pumilio protein 6 [Leishmania infantum JPCM5]
gi|134072566|emb|CAM71280.1| putative pumilio protein 6 [Leishmania infantum JPCM5]
Length = 837
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 117/237 (49%), Gaps = 12/237 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
A+D++GS+++Q + + LD +F+ + E +++ + + +V K ++ N QL
Sbjct: 414 FAKDQEGSRFIQSAVDTASPESLDVLFHEIFESPLELVTDIFGNYVLQKLLDKGNTPQLT 473
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ V+ ++ +G I+K ++ + + LD+++ LK + + G
Sbjct: 474 FAAERMCGH---VVELTMQTYGCRVIQKCIEVMPSAG--LDIILAELKDNVAKCIQDQNG 528
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+E I + FI A + LA H GC + + P ++ ++
Sbjct: 529 NHVIQKCVEVI---PQRCGFIISAFSGRVMELATHAYGCRVIQCIMQHC--PEQEDTIFN 583
Query: 283 ISVNAAS-LSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
+ A L+++ GNYV+QHVL+ ++D IE++ +L+ + LS K S V++
Sbjct: 584 ELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVYAALKPKFFYLSKQKFASNVME 640
>gi|326433440|gb|EGD79010.1| hypothetical protein PTSG_11819 [Salpingoeca sp. ATCC 50818]
Length = 903
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 147/325 (45%), Gaps = 24/325 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ L+ D+ GS+ +Q + S + K+ V E +Q++ + + +V K ++ +
Sbjct: 578 IVELSADQHGSRMIQHCIESATPAEMHKLLEEVGEQLYQVMTDVFGNYVIQKLLQYGDG- 636
Query: 160 QLLRITLQITSQDQLFVQA-SVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL-FRLLM 217
+ I + + V A S+ +G +++++ V + L ++V+K L+ L+
Sbjct: 637 ---TVQHAIVNGMRGRVPALSMHNYGCRVVQEVLATVTSAE-LRNIVLKELEAYNVSDLI 692
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
M + + V+ +C+ + N F+ A ++ H GC + I++ + +
Sbjct: 693 MDQHANHVIQKCVTSLSPDNLG--FVISACERQASAMSRHLYGCRVIQRLIEQCESTQLA 750
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
+ + + ASL +N GNYV+QHVLE + + + G+ + LS K S V++
Sbjct: 751 LVYKNVLDDCASLMKNAYGNYVIQHVLEHGKQEHRDVVMDCVSGNLLTLSQHKFASNVIE 810
Query: 338 NCLKYRIT--VNYIVEEFL--------LNSDQIFRVACDKYGNYVIQTALIETMRPNSLH 387
L+ ++ +V E + + + DKY NYVIQT + R +
Sbjct: 811 KFLRVARADQISSLVAELCRSTALPDGTTAAPLHIMMKDKYANYVIQTLMQFAPRQTQM- 869
Query: 388 LHQRLVTKLQQNLDSLR-FGYGKHV 411
L+ + N + LR + YGKH+
Sbjct: 870 ---ALLDYIHANREVLRGYNYGKHI 891
>gi|168030344|ref|XP_001767683.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681003|gb|EDQ67434.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1085
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 24/290 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + VF V ++ + + +V KF E
Sbjct: 806 VVEFSADQHGSRFIQQKLETATLEDKNMVFQEVLPRALVLMTDVFGNYVIQKFFEHGTHQ 865
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q R L + Q+ V S+ +G I+K ++ V +D + + L +M
Sbjct: 866 Q--RRELASKLEGQVLV-LSLQMYGCRVIQKALEVVD-----VDQQTQLVSELDGNVMRC 917
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI----DEMK 272
+ G+ V+ +C+E + K FI A + L+ H GC + + DE K
Sbjct: 918 VRDQNGNHVIQKCIECV--PPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQK 975
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+K I+ I + +L+++ GNYVVQHVLE + I L G + +S K
Sbjct: 976 ---QKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDHERSEIITKLAGQIVQMSQHKFA 1032
Query: 333 SFVVQNCLKYRITVNY--IVEEF--LLNSDQIFRVACDKYGNYVIQTALI 378
S VV+ CL+Y V +++E L + ++ +V C+ N ++ ++
Sbjct: 1033 SNVVEKCLEYGGPVERQILIDEMLGLTDENEPLQVLCELSSNSLVSGWVV 1082
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 20/248 (8%)
Query: 176 VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR-LLMMTKPGSSVVLQCLEQIY 234
V+ S D+ GS I++ ++ L D M + L R L++MT + V+Q +
Sbjct: 807 VEFSADQHGSRFIQQKLETAT----LEDKNMVFQEVLPRALVLMTDVFGNYVIQKFFEHG 862
Query: 235 HHNNKNDFIYQAALE-HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRN 293
H + + + LE L L+ GC + ++ + ++ Q++ + N R+
Sbjct: 863 THQQRRELASK--LEGQVLVLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGNVMRCVRD 920
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY---RITVNYIV 350
+GN+V+Q +E P I I + + LS G V+Q L++ I+
Sbjct: 921 QNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIM 980
Query: 351 EEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKH 410
EE L ++ +A D+YGNYV+Q L E R H ++TKL + ++ K
Sbjct: 981 EEILRST---CTLAQDQYGNYVVQHVL-EHGRD---HERSEIITKLAGQI--VQMSQHKF 1031
Query: 411 VYNFIKDC 418
N ++ C
Sbjct: 1032 ASNVVEKC 1039
>gi|425774740|gb|EKV13041.1| hypothetical protein PDIG_40650 [Penicillium digitatum PHI26]
gi|425780733|gb|EKV18734.1| hypothetical protein PDIP_26200 [Penicillium digitatum Pd1]
Length = 824
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 137/327 (41%), Gaps = 56/327 (17%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+Q S +LQ+KL G + + ++ + ++ N++ F+ + E +Q++ I
Sbjct: 477 DQQASIFLQQKLKVGTTEQKFDIIESIAHQAYPLMVNRFGNFLIQRCFEHGTPEQVVAIA 536
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKR-------------- 211
I + S+D FG ++K V+ + +V + L+R
Sbjct: 537 NAIRGNT---LNLSMDAFGCHVVQKAFDCVSEEHKAI-MVHELLRRIPETVVHRYACHVW 592
Query: 212 --LFRLLMMTKPGS--SVVLQCLEQIYHH---NNKNDFIYQAALEHCLYLACHEQGCINM 264
LF L +P + V + L ++H + Q E+C
Sbjct: 593 QKLFELRWSGEPPQVMAKVNEALRGMWHDVALGETGSLVVQNIFENC------------- 639
Query: 265 NNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYI 324
++E K P +++L I V L+R GN+ +QH+ E P+ + +
Sbjct: 640 ---VEEEKRPAIEEVLAKIDV----LARGQFGNWCIQHICEHGAPHDKSRAVEHVLRWAV 692
Query: 325 DLSLTKCGSFVVQNCLKYRITV---NYIVEEFLLNSDQ----IFRVACDKYGNYVIQTAL 377
D S+ + S +V+ CLK T +Y+ SD+ + +A D+YGNY+IQ L
Sbjct: 693 DYSMDQFASKIVEKCLKIGGTEFMDHYLSRVCTGRSDRPRMPLIDIAGDQYGNYLIQWIL 752
Query: 378 IETMRPNSLHLHQRLVTKLQQNLDSLR 404
+ + H + + + +++++ SLR
Sbjct: 753 MNA----APHQRELVASHIRKHMVSLR 775
>gi|400597485|gb|EJP65218.1| pumilio domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 809
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 145/335 (43%), Gaps = 34/335 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S ++VF + Q++ + + +V KF E N+
Sbjct: 431 VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIEPNAIQLMKDVFGNYVVQKFFEHGNQV 490
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL---FRLL 216
Q + ++ + V SV + ++K ++ V L++ + K L +
Sbjct: 491 QKKILAEKMRGK---VVDLSVQVYACRVVQKALEHV-----LVEQQAELTKELSPDIIRV 542
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ + G+ V+ + +E + DFI A LA H GC + ++ +
Sbjct: 543 IRDQNGNHVIQKIIELV--PRQYIDFIMDALRGQVTGLASHTYGCRVIQRMLEYGTETDK 600
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+I+ + +A L + GNYV QHV++ P + + + + LS K S VV
Sbjct: 601 LEIMTELHASAQILITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFASNVV 660
Query: 337 QNCLKYRITV--NYIVEEFLL----NSDQIFRVACDKYGNYVIQT-----------ALIE 379
+ C+++ + I E+ S + + D+YGNYVIQ L++
Sbjct: 661 EKCIEHGTPAQRSAIREQLTTVVSDGSSPLQLMMRDQYGNYVIQKLLGQLHGAEKEILVD 720
Query: 380 TMRPNSLHLHQRLVTKLQQNLDSL----RFGYGKH 410
++P L + ++ Q L+ L G G H
Sbjct: 721 EIKPQFFSLKKNGASRQLQALEKLLGLGSRGEGDH 755
>gi|440302927|gb|ELP95233.1| pumilio domain containing protein C4G8.03C, putative [Entamoeba
invadens IP1]
Length = 549
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 167/379 (44%), Gaps = 63/379 (16%)
Query: 69 SNPQYETITSSNFQTPLGFQANPFQHC--------ANSGILLLAQDEQGSQYLQEKLTSG 120
S+ Y T + F P+ PFQ+ A + + ++++ GS+ +Q+ + G
Sbjct: 196 SDENYYQNTYNTFGYPVPNYTMPFQNTYMYQMEQNAPADYVAMSKEHHGSRSVQQNIEKG 255
Query: 121 DSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ----------LLRITLQITS 170
+ ++ + ++ + +A +V K +E E + +LR+TL +
Sbjct: 256 TADERLTIWRAIQSHIVELSADLFANYVIQKALEFVPESRHAVPAQMKNNVLRLTLHM-- 313
Query: 171 QDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL-------MMTKPGS 223
+G ++K ++ A MK K LF L + + G+
Sbjct: 314 ------------YGCRVVQKAVEYAA---------MKDRKLLFEELRGHLVQCIEDQNGN 352
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLAC--HEQGCINMNNFIDEMKGPRRKQILY 281
V+ +C+E+ +++ + + + L C H GC + I+ + +L
Sbjct: 353 HVIQKCVEK----GDRSMVMDVVKALNGIVLECCRHPYGCRVVQRVIESVDYDCVVDLLK 408
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
+I + +L+ + GNYVVQ+VLE I L+G+ + LS+ K S V++ C K
Sbjct: 409 IIEPQSLNLTEDQYGNYVVQNVLERGYDNDRHIILTKLKGNIVRLSMGKYSSNVIEKCFK 468
Query: 342 YRITVN---YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
+ T N I+EE +N D I ++ D++ NYV+Q +IE + N + + + ++
Sbjct: 469 H-ATQNERAQILEEIYVN-DGIVKMMQDQFANYVVQK-IIEAV--NDVDREKIVEGFIKP 523
Query: 399 NLDSL-RFGYGKHVYNFIK 416
N+ L + Y KH+ N ++
Sbjct: 524 NIALLKKVSYTKHILNLLE 542
>gi|339246841|ref|XP_003375054.1| pumilio protein [Trichinella spiralis]
gi|316971694|gb|EFV55440.1| pumilio protein [Trichinella spiralis]
Length = 369
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 146/316 (46%), Gaps = 24/316 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ AQD+ GS+++Q+KL + + VF+ + E ++ + + +V KF E +
Sbjct: 48 VVEFAQDQYGSRFIQQKLERANMQDRQMVFSEIIESAQMLMTDVFGNYVIQKFFEFGTVE 107
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + + + ++ +G I+K ++AV + ++K L+ +
Sbjct: 108 QKNELARVLRPN---VLALALQMYGCRVIQKCLEAVDHEQQ--REIVKELEGNILKCVKD 162
Query: 220 KPGSSVVLQCLEQIYHHNNKN-DFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
+ G+ V+ + +E + + K+ F+ A + L+ H GC + ++ ++K
Sbjct: 163 QNGNHVIQKIIETV---DPKSLQFVIDAFKDQVFALSTHSYGCRVIQRILEHCMMEQKKP 219
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
IL + + SL + GNYV+QHVLE I +R + S K S VV+
Sbjct: 220 ILEELHQHIKSLVCDQYGNYVIQHVLEHGQAEDKSRIIKEMREEILRYSQHKFASNVVEK 279
Query: 339 CLKYRITVNYIVEEFLLNSDQIFRVAC--DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
C+ + EE + I VA D+Y NYV+Q L++ P+ +RL+ +
Sbjct: 280 CVCF-----ATAEE---RNCLIILVAMMKDQYANYVVQK-LLDVADPSQ---RKRLMQNI 327
Query: 397 QQNLDSL-RFGYGKHV 411
+ ++ L RF YGKH+
Sbjct: 328 RPHVPQLRRFTYGKHI 343
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 122/258 (47%), Gaps = 19/258 (7%)
Query: 165 TLQITSQDQLFVQASVDKFGSSSIR-KLMKA-VANRPPLLDLVMKALKRLFRLLMMTKPG 222
TLQ+ V+ + D++GS I+ KL +A + +R + ++++ + ++MT
Sbjct: 38 TLQLRDVTNHVVEFAQDQYGSRFIQQKLERANMQDRQMVFSEIIESAQ-----MLMTDVF 92
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+Q + KN+ + + + L LA GC + ++ + ++++I+
Sbjct: 93 GNYVIQKFFEFGTVEQKNE-LARVLRPNVLALALQMYGCRVIQKCLEAVDHEQQREIVKE 151
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
+ N ++ +GN+V+Q ++E DP ++ + + + LS G V+Q L++
Sbjct: 152 LEGNILKCVKDQNGNHVIQKIIETVDPKSLQFVIDAFKDQVFALSTHSYGCRVIQRILEH 211
Query: 343 RITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNL 400
+ I+EE I + CD+YGNYVIQ L + R++ ++++ +
Sbjct: 212 CMMEQKKPILEEL---HQHIKSLVCDQYGNYVIQHVLEHGQAEDK----SRIIKEMREEI 264
Query: 401 DSLRFGYGKHVYNFIKDC 418
LR+ K N ++ C
Sbjct: 265 --LRYSQHKFASNVVEKC 280
>gi|402590419|gb|EJW84349.1| hypothetical protein WUBG_04743 [Wuchereria bancrofti]
Length = 399
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 165/374 (44%), Gaps = 38/374 (10%)
Query: 55 SLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSG--ILLLAQDEQGSQY 112
S+SGR G + E T S+ NP + G ++ AQD+ GS++
Sbjct: 16 SVSGR-------GYVSADGERQTRSHLLDDFRNNRNPHLQLIDLGKHVVEFAQDQHGSRF 68
Query: 113 LQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQD 172
+Q+KL + VF+ V+ ++ + + +V KF E +Q +T +
Sbjct: 69 IQQKLERASLKEKQAVFDEVALHAQSLMTDVFGNYVIQKFFEYGTSEQKNILTNAVKGN- 127
Query: 173 QLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQ 232
+ ++ +G I+K ++++ P ++K ++ + + G+ VV + +E+
Sbjct: 128 --VMSLALQMYGCRVIQKALESI--EPEQQMEILKEMEGQVLKCVKDQNGNHVVQKVIER 183
Query: 233 IYHHNNKNDFIYQAALEH-----CLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNA 287
+ ++ FI A + L+ H GC + ++ +++ +L + +
Sbjct: 184 V--DASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDEQKRPVLDQLHKHV 241
Query: 288 ASLSRNFSGNYVVQHVLE---LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI 344
SL + GNYV+QHV+E LED + I ++G + + K S V++ CL
Sbjct: 242 KSLIVDQYGNYVIQHVIEHGSLEDR---DRIVNQVKGDVLRFAQHKFASNVIEKCLTCGE 298
Query: 345 T--VNYIVEEFLLNSDQI----FRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
N ++ E N + I + D++ NYV+Q L L ++++ ++
Sbjct: 299 PHHKNALITEVCGNPNDIATPLLMMMKDQFANYVVQKMLDVA----DSALRKKMMLAIKP 354
Query: 399 NLDSLR-FGYGKHV 411
++ +LR + YGKH+
Sbjct: 355 HIPALRKYNYGKHI 368
>gi|414885203|tpg|DAA61217.1| TPA: hypothetical protein ZEAMMB73_669990 [Zea mays]
Length = 484
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 242 FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQ 301
FI +A ++C LA G + N ++ + ++ I +S + L++N GN++VQ
Sbjct: 308 FILKAVAQNCTRLAYQPDGLSLLQNCLERVSRKQKDDIFTQLSYQSLFLAQNSRGNWIVQ 367
Query: 302 HVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK--YRITVNYIVEEFLLNSDQ 359
VL DP +E I LR HY+ L+ K S VV+ CL+ + + I+ EF +N
Sbjct: 368 DVLRKGDPSHVEIIASCLRNHYVTLAKNKYSSNVVEWCLRVFHEGERSVIICEF-INYPH 426
Query: 360 IFRVACDKYGNYVIQTAL 377
+ D++ N+ + TAL
Sbjct: 427 FRDLVTDEFANFALSTAL 444
>gi|145525300|ref|XP_001448472.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416016|emb|CAK81075.1| unnamed protein product [Paramecium tetraurelia]
Length = 483
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 151/319 (47%), Gaps = 33/319 (10%)
Query: 110 SQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKF-IETCNEDQLLRITLQI 168
S+ +Q+ +G + ++F + Q C ++++ +FG + I+ E L+ +QI
Sbjct: 171 SRKVQKIFETGQTNQRQQIF-----WKVQANCQEFSKDIFGNYLIQKILEKGTLQQQIQI 225
Query: 169 TSQDQLFV-QASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVL 227
Q Q +V + S + FG I+KL+ ++ L+ ++ +K+ + L+ + G V+L
Sbjct: 226 FKQLQPYVVELSKNTFGCRVIQKLIDIISKNDHLIVPFIQEIKQNIKSLLTDQNGKYVIL 285
Query: 228 QCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISV-N 286
+CLE + + FI + E ++ + GC + ID P++ L I + N
Sbjct: 286 KCLENLSIDVVR--FILKPTEELGFHMCDSQYGCKIIQKLIDNY--PKQVDTLVQICITN 341
Query: 287 AASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY---R 343
L ++ GN+++Q+ ++L P ++ I + H +L K S V++ LKY +
Sbjct: 342 QNLLYKSQHGNHILQYAIKL--PKYLDIIANYILNHLENLCFNKYASNTVEDILKYLTPK 399
Query: 344 ITVNYIVEEFLLNSDQ------IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ N++ + L+ + +A + +GNYV++ L + Q+LV ++
Sbjct: 400 LKNNFV--QILMKPSENNGMFIFLNLAINPFGNYVVKKVL----QIFDQEHKQQLVDLMK 453
Query: 398 QNLDSLRF----GYGKHVY 412
QNL L YG+ +Y
Sbjct: 454 QNLRLLYLIKQSEYGQRIY 472
>gi|401427766|ref|XP_003878366.1| putative pumilio protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322494614|emb|CBZ29916.1| putative pumilio protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 842
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 126/270 (46%), Gaps = 18/270 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
A+D++GS+++Q + LD +F+ + E +++ + + +V K ++ N QL
Sbjct: 414 FAKDQEGSRFIQSAADTASPESLDVLFHEIFESPLELVTDIFGNYVLQKLLDKGNTPQLT 473
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ V+ ++ +G I+K ++ + LD+++ LK + + G
Sbjct: 474 FAAERMCGH---VVELTMQTYGCRVIQKCIEVMPEAG--LDIILAELKDNVAKCIQDQNG 528
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+E I + FI A + LA H GC + + P ++ ++
Sbjct: 529 NHVIQKCVEVI---PQRCGFIISAFSGRVMELATHAYGCRVIQCIMQHC--PEQEDTIFN 583
Query: 283 ISVNAAS-LSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
+ A L+++ GNYV+QHVL+ ++D IE++ +L+ + LS K S V++
Sbjct: 584 ELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVYAALKPKFFYLSKQKFASNVMEKLY 643
Query: 341 KYRITVNY--IVE----EFLLNSDQIFRVA 364
N IVE +F +D + VA
Sbjct: 644 ARSSPANRMEIVEMMCADFPTKADHVEIVA 673
>gi|260949221|ref|XP_002618907.1| hypothetical protein CLUG_00066 [Clavispora lusitaniae ATCC 42720]
gi|238846479|gb|EEQ35943.1| hypothetical protein CLUG_00066 [Clavispora lusitaniae ATCC 42720]
Length = 752
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 149/305 (48%), Gaps = 34/305 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTS---GDSRFLDKVFNVVSE----FTFQIICNQYARFVFGKF 152
I LA+D+ G ++LQ+++ +S+ + F V+ E +++I + + ++ K
Sbjct: 136 IFRLAKDQHGCRFLQKRIDENVVSNSQTREANFEVIFEQVHPILYELIIDPFGNYLIQKL 195
Query: 153 IETCNEDQLLRI--TLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
I+ C+E L I TLQ S+++ G+ +++K++ +++ L L++K LK
Sbjct: 196 IDYCDETNLNLILETLQFN-----LFSISINQHGTRALQKVIDRMSSDYQL-SLLIKGLK 249
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ + L + N + FIY + ++ L +A H+ GC + ++
Sbjct: 250 PYIIELIKDLNGNHVIQKILNKYSPENCQ--FIYDSIIQDLLVVATHKHGCCVLQKCLNH 307
Query: 271 MKGPRRKQI-LYLISVNA-ASLSRNFSGNYVVQHVLELEDPYLIETICFS--LRGHYIDL 326
+ + Q ++ N L + GNYV+Q+++ + D I +S +R DL
Sbjct: 308 VNPSQLMQFSTNILKYNVFMKLVNDQFGNYVLQYLISI-DSIDINGQLYSNFVRFGVSDL 366
Query: 327 SLTKCGSFVVQNCLKYRITVNYIVEEF----------LLNSDQIFRVACDKYGNYVIQTA 376
+K S VV+ ++ + EF +L+SD + ++ D YGNYVIQT
Sbjct: 367 CKSKFSSNVVEKLMRNCFNNEFKSVEFSNLKFSLVSQILSSD-LNKLINDPYGNYVIQT- 424
Query: 377 LIETM 381
LI+T+
Sbjct: 425 LIDTL 429
>gi|68489418|ref|XP_711460.1| hypothetical protein CaO19.9361 [Candida albicans SC5314]
gi|68489451|ref|XP_711443.1| hypothetical protein CaO19.1795 [Candida albicans SC5314]
gi|46432746|gb|EAK92215.1| hypothetical protein CaO19.1795 [Candida albicans SC5314]
gi|46432764|gb|EAK92232.1| hypothetical protein CaO19.9361 [Candida albicans SC5314]
Length = 929
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 150/331 (45%), Gaps = 42/331 (12%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE--TCNEDQ 160
+D+ GS+++Q+KL + +FN + E +++++ + + +V K+ E T + Q
Sbjct: 592 FTKDQHGSRFIQQKLPEATEEEKETIFNEIWEISYELMTDVFGNYVIQKYFEYGTTTQKQ 651
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
+L + S + S+ +G +++ ++A+ N L +++ LK + +
Sbjct: 652 VL-----LESMIGHIHELSLQMYGCRVVQRALEAIDNEGQL--RIIEELKDHILICCKDQ 704
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ V+ + +E+I ++ +I + +L+ H GC + ++ +K IL
Sbjct: 705 NGNHVIQKSIEKIKPF-SQIRYILTSLDNQIYHLSTHPYGCRVIQRLLEYSDIDDQKLIL 763
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
++ L + GNYV+QH+LE E I + G + S K S V++ C+
Sbjct: 764 SQLNNFLYYLILDQYGNYVIQHILENGTQEEKEPILEIVLGSVVQFSKHKFASNVIEKCI 823
Query: 341 KYRITVN---YIVEEFLLNSDQIFR-----------------VACDKYGNYVIQTALIET 380
K+ +N I+ E +L ++ I + D++GNYVIQ L+E
Sbjct: 824 KFG-DINQRKRILHEVMLGNETILGDDDIDGEPVKEDSPLALMVKDQFGNYVIQ-KLVEA 881
Query: 381 MRPNSLHLHQRLVTKLQQ-------NLDSLR 404
+ L L+ K+++ NL S+R
Sbjct: 882 FDGDERKL---LIIKIKKCLSLSSNNLASIR 909
>gi|298710813|emb|CBJ32228.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 543
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 160/360 (44%), Gaps = 32/360 (8%)
Query: 70 NPQYETITSSNFQTPLGFQANPFQHCANSG--ILLLAQDEQGSQYLQEKLTSGDSRFLDK 127
+P+Y + Q+P G P A G + +D+ GS+++Q+KL +
Sbjct: 186 DPRYPRV----HQSPRGPTGYPDPMAAGGGGHTVQFCRDQHGSRFIQQKLEVSTDEDKEA 241
Query: 128 VFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSS 187
FN + T ++ + + +V K + + Q + + VQ S+ +G
Sbjct: 242 FFNEILPHTQSLMTDVFGNYVVQKLFDNGSSAQREALASFLVGH---AVQLSLQMYGCRV 298
Query: 188 IRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQI---------YHHNN 238
++K ++ ++ L+ LV + ++ + + + G+ VV +C+E + Y H++
Sbjct: 299 VQKALE-YSSIDTLIALVSEFCGQVMKCVQ-DQNGNHVVQKCIEVVSTTAKTEGQYLHSH 356
Query: 239 KNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNY 298
FI + L+ H GC + ++ +++ IL I + + L ++ GNY
Sbjct: 357 IQ-FIIDGFVGQVEKLSMHAYGCRVIQRILEHCIDEQKQVILEEIKDSFSVLIQDQYGNY 415
Query: 299 VVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY------RITVNYIVEE 352
V+QHVL+ P + ++ + + S K S VV+ CL+Y + + +++
Sbjct: 416 VIQHVLKHGRPTDRGRLMREVKENLLSYSQHKFASNVVEKCLQYGTKEERGVLIQHLLYG 475
Query: 353 FLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
+ + + CD Y NYV+Q +I+ Q ++ +++ + L R+ +GKH+
Sbjct: 476 HSDGTSLLQVMVCDPYANYVVQK-IIDVADQEQ---RQTIIMEIKAHAAQLKRYTFGKHI 531
>gi|440298987|gb|ELP91602.1| pumilio domain containing protein C6G9.14, putative [Entamoeba
invadens IP1]
Length = 486
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 149/346 (43%), Gaps = 31/346 (8%)
Query: 52 AVPSLSGRSTVPNLSGTSNPQYETITSS---------NFQTPLGFQANPFQHCANSGILL 102
++PSL +V NL + P+ +T+ S+ N + + F +
Sbjct: 117 SIPSL--EESVGNLRAS--PRVQTLISTPPAYKKPSHNMKFSKSLKQPSFFSTKTHTVTD 172
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+QGS+ +Q+ L + ++++FN +S ++++ + + +V K E ++ +
Sbjct: 173 LCKDQQGSRRIQQFLDTASKAEVEEIFNFISNDIYELMLDLFGNYVIQKLFEFGTKE--I 230
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R + ++ V S +G I+K ++ + + + ++ +K + + G
Sbjct: 231 RDVFMDVVKSRV-VMLSTHTYGCRVIQKAVEFIDAKQ--MGILADEIKGHIVAFVEDQNG 287
Query: 223 SSVVLQCLE---QIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ V+ + +E IY + I + H + H GC + ++ + + +
Sbjct: 288 NHVIQRFIEFMPSIY-----SSMISEEITGHVVSFGKHAYGCRVVQKLVERREDVIHRTL 342
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ N L+ N GNYV+QH+LE + ++G + + S K S VV+ C
Sbjct: 343 NKELENNIWDLAMNQYGNYVIQHLLEKGTRVQQNMVINEMKGKFCEFSTKKYSSNVVEKC 402
Query: 340 LK--YRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETM 381
+ + V E D + ++ D Y NYVIQT L+E M
Sbjct: 403 MHCCTPTQRDGFVNEICGKKDNEMLLKLMKDPYANYVIQT-LVEVM 447
>gi|119467660|ref|XP_001257636.1| mRNA binding protein Pumilio 2, putative [Neosartorya fischeri NRRL
181]
gi|119405788|gb|EAW15739.1| mRNA binding protein Pumilio 2, putative [Neosartorya fischeri NRRL
181]
Length = 908
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 143/337 (42%), Gaps = 44/337 (13%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 496 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 555
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 556 QKKILANQMKGH---VLALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKC 607
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + FI A LA H GC + ++ + R
Sbjct: 608 VRDQNGNHVIQKAIERVPSQYVQ--FIINAFKGQVSRLAAHPYGCRVIQRMLEHCEEVDR 665
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + A L + GNYV+QHV+E + + + + S K S VV
Sbjct: 666 ESILAELHACTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLSQLLMYSKHKFASNVV 725
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT-----------ALIE 379
+ +++ R ++ + + + D+YGNYVIQ ALI+
Sbjct: 726 EKSIEFGEESQRRQIISTLTSANERGESPLLGLMRDQYGNYVIQKVLGQLKGEEREALID 785
Query: 380 TMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIK 416
+RP L+++L+ +F YGK + K
Sbjct: 786 QIRP--------LLSQLK------KFSYGKQIVAIEK 808
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
VV L + + N+K + Y+ H + + + G + ++ ++Q+
Sbjct: 468 VVRSPLLEEFRANSKGNKRYELKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKEQVFRE 527
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I N L + GNYVVQ + E + + + ++GH + LS G VVQ L++
Sbjct: 528 IQPNCLQLMTDVFGNYVVQKLFEHGNQSQKKILANQMKGHVLALSTQMYGCRVVQKALEH 587
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 588 ILTDQQASMVKEL---ENHVLKCVRDQNGNHVIQKAI 621
>gi|430812324|emb|CCJ30264.1| unnamed protein product [Pneumocystis jirovecii]
Length = 738
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 132/295 (44%), Gaps = 37/295 (12%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+ L + + VF + + Q++ + + +V KF+E + D
Sbjct: 408 IVEFSGDQHGSRFIQQALEGASAEDKEIVFQEIFPNSLQLMTDVFGNYVIQKFME--HGD 465
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q+ + TL + + S+ +G ++K ++ + +D + +K L
Sbjct: 466 QMQK-TLLLEQMKGHVLTLSLQTYGCRVVQKALEYIQ-----IDQKISLVKEL------- 512
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYL-----------ACHEQGCINMNNFI 268
+ VL+C++ ++ I + +EH +L A H GC + +
Sbjct: 513 ---NGNVLKCIKNQNGNHVIQKIIEKVPIEHIQFLINTFQGQIYVLATHPYGCRVIQRML 569
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
+ R ++ + + A +L R+ GNY +QH++E +P I ++G+ S
Sbjct: 570 EYCSQTR--DLIKELHLYAQNLIRDQYGNYCIQHIIEKGEPEDRSKIISVVKGNVFRFSR 627
Query: 329 TKCGSFVVQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
K S VV+ C+ Y ++ ++ I+E + + D+Y NYVI+ AL
Sbjct: 628 HKFASNVVEKCITYGTDEEKKLLIDEIIESNENGMSFLLPMIKDQYANYVIKKAL 682
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H L L+ GC + ++ ++ ++ ++ ++ N +N +GN+V+Q ++E
Sbjct: 479 HVLTLSLQTYGCRVVQKALEYIQIDQKISLVKELNGNVLKCIKNQNGNHVIQKIIEKVPI 538
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
I+ + + +G L+ G V+Q L+Y +++E L + + R D+YG
Sbjct: 539 EHIQFLINTFQGQIYVLATHPYGCRVIQRMLEYCSQTRDLIKELHLYAQNLIR---DQYG 595
Query: 370 NYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIKDC 418
NY IQ +IE P ++++ ++ N+ RF K N ++ C
Sbjct: 596 NYCIQ-HIIEKGEPED---RSKIISVVKGNV--FRFSRHKFASNVVEKC 638
>gi|222624342|gb|EEE58474.1| hypothetical protein OsJ_09731 [Oryza sativa Japonica Group]
Length = 599
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
Query: 238 NKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSR---NF 294
++ D I++ ++H L + + +D +R +I+ +++ + L R N
Sbjct: 418 DQADLIFEGIIDHIPELMANSFANYLVQKLLDVCDEEQRLRIIAVLTEDPVKLLRVSLNS 477
Query: 295 SGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YIVEE 352
GNYV+Q+VL+L+ P+ + +G+Y+ LS K GS VV+ CLK + I+ E
Sbjct: 478 HGNYVIQYVLDLKIPFANAQLASLFQGNYVYLSKQKVGSNVVEKCLKVFPDDDKAAIIWE 537
Query: 353 FLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR 404
L+++ ++ D Y NYVI TAL++T HL LV + + +++R
Sbjct: 538 -LISASHFEQLLQDPYANYVIHTALVQTRG----HLRSALVNAILPHEEAIR 584
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 80/151 (52%), Gaps = 6/151 (3%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I +A+D+ G ++LQ+K G + D +F + + +++ N +A ++ K ++
Sbjct: 392 AKGYIYFMAKDQNGCRFLQQKFEEGKDQ-ADLIFEGIIDHIPELMANSFANYLVQKLLDV 450
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKAL-KRLFR 214
C+E+Q LRI +T ++ S++ G+ I+ ++ + P + + +L + +
Sbjct: 451 CDEEQRLRIIAVLTEDPVKLLRVSLNSHGNYVIQYVLDL---KIPFANAQLASLFQGNYV 507
Query: 215 LLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQ 245
L K GS+VV +CL +++ ++K I++
Sbjct: 508 YLSKQKVGSNVVEKCL-KVFPDDDKAAIIWE 537
>gi|440302948|gb|ELP95254.1| hypothetical protein EIN_430600 [Entamoeba invadens IP1]
Length = 452
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 144/307 (46%), Gaps = 14/307 (4%)
Query: 101 LLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
L + D+ G + LQ+KL D +D+++ + +I +Q+ ++ K IE +++Q
Sbjct: 135 LKMCCDQFGCRCLQKKLEDDDDDAIDEIYERMLPIMNNLIADQFGNYLCQKLIEVVDDEQ 194
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
L I L+ S + + ++ G+ S++K++ + + +L++ + L+
Sbjct: 195 RLDI-LKCVSNNIGIISKNI--HGTRSVQKMINCATTKAEIDELILSLSPHIVDLVF-DG 250
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLAC-HEQGCINMNNFID-EMKGPRRKQ 278
G+ V+ +CL+ NK FI+ L C H+ GC + ID +G K
Sbjct: 251 NGNHVIQECLKTFSKEQNK--FIFDGILGDSFVEICEHKHGCCVVQRCIDFGNRGQLNKL 308
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ +IS N + + GNYVVQ++L+++ ++ + + I LS K S V++
Sbjct: 309 VDKVIS-NTLEIITDPYGNYVVQYILKVDVDHVCMDVTKIILDDLIVLSTQKFSSNVIEQ 367
Query: 339 -CLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ + V ++ + L + R+ + NYVIQT L + R H +L +
Sbjct: 368 LVMSDEVGVKELMFDKFLQYKDVERLLQGSFSNYVIQTCLENSSR----EYHVKLSNWIL 423
Query: 398 QNLDSLR 404
++DS++
Sbjct: 424 PHIDSIK 430
>gi|389748876|gb|EIM90053.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 400
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 148/327 (45%), Gaps = 32/327 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFN-VVSEFTFQIICNQYARFVFGKFIETCNE 158
++ + D+ GS+++Q+KL S S VF+ +V +I + + +V K E +
Sbjct: 44 VVEFSGDQHGSRFIQQKLESASSEEKQFVFDEIVPSNALALIQDVFGNYVIQKLFEHGTQ 103
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
Q T+ TS + + S+ +G ++K ++ + P + +K L+ +
Sbjct: 104 VQK---TVLATSMETHILSLSLQMYGCRVVQKAVEYIL--PEQQSIFVKELEPHVLRCVK 158
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFI--YQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
G+ V+ + +E++ + F+ +Q H L+ H GC + + + +
Sbjct: 159 DANGNHVIQKLIERVA--PERLGFVPSFQG---HVWELSTHPYGCRVLQRCFEHLAEDQT 213
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ +L + + +L ++ GNYV+Q+VLE P I LRG + +S K S V
Sbjct: 214 RPLLEELHKHTRNLMQDQFGNYVIQYVLEHGKPQDRNLIINQLRGQMMAMSRHKFASNV- 272
Query: 337 QNCLKYRITVN-----YIVEEFLL----NSDQIFRVACDKYGNYVIQTALIETMRPNSLH 387
C K +T + +++E ++ + I + D+Y NYV+Q A++
Sbjct: 273 --CEKALVTADSASRRQLIDEIMVPRHDGASPIITMMKDQYANYVLQRAMVVAEGDQR-- 328
Query: 388 LHQRLVTKLQQNLDSLR---FGYGKHV 411
L++K++ L+S+R Y KH+
Sbjct: 329 --DELLSKVRPQLNSMRRYSTAYSKHL 353
>gi|157874927|ref|XP_001685873.1| putative pumilio protein 6 [Leishmania major strain Friedlin]
gi|68128946|emb|CAJ06238.1| putative pumilio protein 6 [Leishmania major strain Friedlin]
Length = 850
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 116/237 (48%), Gaps = 12/237 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
A+D++GS+++Q + + LD +F+ + E +++ + + +V K ++ N QL
Sbjct: 415 FAKDQEGSRFIQSAVDTASPESLDVLFHEIFESPLELVTDIFGNYVLQKLLDKGNTPQLT 474
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ V+ ++ +G I+K ++ + LD+++ LK + + G
Sbjct: 475 FAAERMCGH---VVELTMQTYGCRVIQKCIEVMP--AAGLDILLAELKDNVAKCIQDQNG 529
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+E I + FI A + LA H GC + + P ++ ++
Sbjct: 530 NHVIQKCVEVI---PQRCGFIISAFSGRVMELATHAYGCRVIQCIMQHC--PEQEDTIFN 584
Query: 283 ISVNAAS-LSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
+ A L+++ GNYV+QHVL+ ++D IE++ +L+ + LS K S V++
Sbjct: 585 ELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVYAALKPKFFYLSKQKFASNVME 641
>gi|255728835|ref|XP_002549343.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133659|gb|EER33215.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 970
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 144/311 (46%), Gaps = 37/311 (11%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSG-----DSRF--LDKVFNVVSEFTFQIICNQYARFVFG 150
S IL LA+D+ G ++LQ+K+ R D +FN ++ +++I + + ++
Sbjct: 300 SEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFDIIFNQTYQYMYELIIDPFGNYLIQ 359
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K I CNE L + ++I Q LF Q S+++ G+ +++K++ + N L L++K LK
Sbjct: 360 KLIAYCNESN-LDLLMEIL-QYNLF-QISINQHGTRALQKIIDNL-NNSHQLGLLIKGLK 415
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ + L + + FIY + ++ +A H+ GC + ++
Sbjct: 416 PYIIELIKDLNGNHVIQKILNK--YQPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNH 473
Query: 271 MK----GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
+ G + IL N L + GNYV+Q+++ + I F + ++I
Sbjct: 474 VTLQQLGEFSRAILKF--ENFKLLINDQFGNYVLQYLISINS----LDINFKIFQNFITF 527
Query: 327 SLT-----KCGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVAC--------DKYGNYV 372
++ K S VV+ LK T + F L + I+ + D YGNYV
Sbjct: 528 GISNLCNLKFSSNVVEKFLKNCYTNETVNSSFANLKFELIYIILINDLNVLINDPYGNYV 587
Query: 373 IQTALIETMRP 383
IQT + + P
Sbjct: 588 IQTMIDIIVNP 598
>gi|218202388|gb|EEC84815.1| hypothetical protein OsI_31896 [Oryza sativa Indica Group]
Length = 988
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 150/326 (46%), Gaps = 22/326 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + D +F V +++ + + +V KF E +
Sbjct: 656 IVKYSSDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKFFEKGSPQ 715
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q I ++ S+ +G I+K ++ + ++ LV + + R +
Sbjct: 716 QKREIANKLAGH---VFSLSLQMYGCRVIQKALEVIDLEQKIV-LVGELDGHVLRCVH-D 770
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ +C+E I + F+ + L+ H GC + ++ +
Sbjct: 771 QNGNHVIQKCIECIPLEHI--GFLVSSFQCQVAKLSMHTYGCRVIQRILERCS--NNSEC 826
Query: 280 LYLISV---NAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
L +I +A L+++ GNYVVQHVLE + + I L G + +S K S V+
Sbjct: 827 LCIIDEILQSACILAQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASNVI 886
Query: 337 QNCLKYRITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQR 391
+ C ++ + +V+E L ++ + + D+Y NYV+Q L N H +
Sbjct: 887 ERCFEHGGSAERELLVKEILKQTEGNNYLLVIMKDQYANYVVQKMLTTC---NEQH-KEI 942
Query: 392 LVTKLQQNLDSL-RFGYGKHVYNFIK 416
L+++++ +L L ++ Y KH+ + ++
Sbjct: 943 LLSRVKIHLPLLKKYTYAKHIVSLVE 968
>gi|385304539|gb|EIF48553.1| protein of the mitochondrial outer surface [Dekkera bruxellensis
AWRI1499]
Length = 419
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 139/311 (44%), Gaps = 23/311 (7%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
++D+ GS+++Q++L + + +FN + ++ ++ + + +V K+ E NE Q
Sbjct: 93 FSKDQHGSRFIQQQLADASAEDKEMIFNEIRNYSIDLMTDVFGNYVIQKYFEYGNETQ-- 150
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
I + S F S+ +G ++K M +V+ L V+ LK L+ + G
Sbjct: 151 -IKILFESMKGNFNFLSMQMYGCRVVQKCMDSVSLDDRL--QVVDELKPNILNLVKDQNG 207
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ + +E I ++ FI ++ +L+ H GC + ++ R IL
Sbjct: 208 NHVIQKVIESI--PTSRTPFILESLKHQIYHLSTHPYGCRVIQRLLEYSDEEDRAYILGE 265
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
+ L ++ GNYV+QH++E E I + + ++LS K S V+ C+ +
Sbjct: 266 LKGFIYYLVQDQFGNYVIQHIIEHGSEQYTEQILQIVIDNLVNLSKHKFASNAVEKCIVH 325
Query: 343 R------------ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ + N + L + + + D + NYV+Q ++E + L
Sbjct: 326 QSAENRRRVYNALLAKNENKDSPLDENSSLSIMMKDPFANYVVQ-KMVELVDGPERAL-- 382
Query: 391 RLVTKLQQNLD 401
LV K++Q LD
Sbjct: 383 -LVYKIRQYLD 392
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 19/174 (10%)
Query: 207 KALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNN 266
K KR+FR + LE+ + N ++ + L H + + G +
Sbjct: 58 KTKKRIFRSPL------------LEEFRSNKNGKEYKLKDILGHAYEFSKDQHGSRFIQQ 105
Query: 267 FIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
+ + ++ I I + L + GNYV+Q E + I+ + S++G++ L
Sbjct: 106 QLADASAEDKEMIFNEIRNYSIDLMTDVFGNYVIQKYFEYGNETQIKILFESMKGNFNFL 165
Query: 327 SLTKCGSFVVQNCLKYRITVN---YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
S+ G VVQ C+ ++++ +V+E N I + D+ GN+VIQ +
Sbjct: 166 SMQMYGCRVVQKCMD-SVSLDDRLQVVDELKPN---ILNLVKDQNGNHVIQKVI 215
>gi|299753403|ref|XP_001833252.2| pumilio [Coprinopsis cinerea okayama7#130]
gi|298410285|gb|EAU88525.2| pumilio [Coprinopsis cinerea okayama7#130]
Length = 461
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 133/290 (45%), Gaps = 19/290 (6%)
Query: 104 AQDEQGSQYLQEKLTSGDSRFLDKVFN-VVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
++D++ S+++Q+ + D+ LD +++ V S+ I N +V K ++ +E Q
Sbjct: 124 SRDQRASRFIQQVIEDADTDALDLIWSEVASDDLLTISFNACGNYVVQKLLDRGSEAQ-- 181
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R+ L Q + VQ S D +G I+K++ V N +V++A + L ++ P
Sbjct: 182 RVKLATALQGHV-VQVSQDAYGCWVIQKVLDVVPNHV-RGQIVLEAEPHI--LTLVKDPN 237
Query: 223 SSVVLQCLEQIYHHNNKN--DFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
+ V+Q + Q+ D + A+E +A GC + + + + +L
Sbjct: 238 GNHVVQKILQVVPARYLTFVDAFHGRAVE----IARDNYGCRVLQRCLQHLPFEAVQPLL 293
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
+ + + GNYV+QH+L+ E I +RG + L+ K S V++ L
Sbjct: 294 QELKPFILEMICDQFGNYVIQHILQDGKTSEKEEIFHQIRGRVLRLARHKYASNVLEKAL 353
Query: 341 KYR--ITVNYIVEEFLLN----SDQIFRVACDKYGNYVIQTALIETMRPN 384
+ + + I+EE L ++++ D+YGNYV+Q AL P
Sbjct: 354 THAPPLIRHAIIEEMLTTVKGFPKGVWQLMNDQYGNYVLQKALTLAEEPQ 403
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 176 VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYH 235
+Q + GS SI M + + P+L K L+ L+ +PG S +L LE +
Sbjct: 51 IQPPIQVDGSPSILPEMPTLLRQAPMLPPPPKELEAQPSELL--QPGCSKLL--LE--FK 104
Query: 236 HNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAAS-----L 290
N K + + H + ++ + FI ++ L LI AS +
Sbjct: 105 TNLKKRWELKDVRGHIAEFSRDQRA----SRFIQQVIEDADTDALDLIWSEVASDDLLTI 160
Query: 291 SRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIV 350
S N GNYVVQ +L+ + +L+GH + +S G +V+Q L + N++
Sbjct: 161 SFNACGNYVVQKLLDRGSEAQRVKLATALQGHVVQVSQDAYGCWVIQKVLD--VVPNHVR 218
Query: 351 EEFLLNSD-QIFRVACDKYGNYVIQTAL 377
+ +L ++ I + D GN+V+Q L
Sbjct: 219 GQIVLEAEPHILTLVKDPNGNHVVQKIL 246
>gi|115479929|ref|NP_001063558.1| Os09g0497100 [Oryza sativa Japonica Group]
gi|113631791|dbj|BAF25472.1| Os09g0497100 [Oryza sativa Japonica Group]
gi|215678529|dbj|BAG92184.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641849|gb|EEE69981.1| hypothetical protein OsJ_29881 [Oryza sativa Japonica Group]
Length = 988
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 150/326 (46%), Gaps = 22/326 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + D +F V +++ + + +V KF E +
Sbjct: 656 IVKYSSDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKFFEKGSPQ 715
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q I ++ S+ +G I+K ++ + ++ LV + + R +
Sbjct: 716 QKREIANKLAGH---VFSLSLQMYGCRVIQKALEVIDLEQKIV-LVGELDGHVLRCVH-D 770
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ V+ +C+E I + F+ + L+ H GC + ++ +
Sbjct: 771 QNGNHVIQKCIECIPLEHI--GFLVSSFQCQVAKLSMHTYGCRVIQRILERCS--NNSEC 826
Query: 280 LYLISV---NAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
L +I +A L+++ GNYVVQHVLE + + I L G + +S K S V+
Sbjct: 827 LCIIDEILQSACILAQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASNVI 886
Query: 337 QNCLKYRITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQR 391
+ C ++ + +V+E L ++ + + D+Y NYV+Q L N H +
Sbjct: 887 ERCFEHGGSAERELLVKEILKQTEGNNYLLVIMKDQYANYVVQKMLTTC---NEQH-KEI 942
Query: 392 LVTKLQQNLDSL-RFGYGKHVYNFIK 416
L+++++ +L L ++ Y KH+ + ++
Sbjct: 943 LLSRVKIHLPLLKKYTYAKHIVSLVE 968
>gi|409046090|gb|EKM55570.1| hypothetical protein PHACADRAFT_95334 [Phanerochaete carnosa
HHB-10118-sp]
Length = 372
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 147/335 (43%), Gaps = 30/335 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFN-VVSEFTFQIICNQYARFVFGKFIETCNE 158
++ + D+ GS+++Q+K+ + D +F+ ++ ++I + + +V KF E NE
Sbjct: 45 VVEFSMDQHGSRFIQQKIETADEEEKQIIFDEIMPHHALKLIQDVFGNYVVQKFFEHGNE 104
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPP-----LLDLVMKALKRLF 213
L+ +L + + + S+ +G R + KA+ + P +D + + R
Sbjct: 105 ---LQTSLLAKTMEGHILPLSLQMYGC---RVVQKAIEHMPAEQQSAFVDELAGDVLRCV 158
Query: 214 RLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALE-HCLYLACHEQGCINMNNFIDEMK 272
+ G+ V+ + +E + + AA + H LA H GC + + +
Sbjct: 159 K----DANGNHVIQRLIESV----PPERLTFIAAFQGHVCDLATHPYGCRVLQRCFENLP 210
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
+ + +L + +A L ++ GNYV+Q VLE P +I L G + +S K
Sbjct: 211 EHQTRVLLSEVQEHALQLMQDQFGNYVIQFVLEHGQPQDRASIVSKLHGQMLHMSRHKFA 270
Query: 333 SFVVQNCL------KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
S VV+ L R + ++ + + D++ NYV+Q AL+ +
Sbjct: 271 SNVVEKALVMAEPSSRRALIEEVMAPRPDGPNPFVSMMKDQFANYVLQRALMVADQDQKE 330
Query: 387 HLHQRLVTKLQQNLDSLRFGYGKH-VYNFIKDCDL 420
L + LV QNL + +G+H V + DCD+
Sbjct: 331 ALVE-LVKPQLQNLRKISH-HGRHLVASKWLDCDI 363
>gi|241954858|ref|XP_002420150.1| RNA binding protein, putative; mRNA-binding protein involved in RNA
catabolism, putative [Candida dubliniensis CD36]
gi|223643491|emb|CAX42370.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 943
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 137/303 (45%), Gaps = 34/303 (11%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE--TCNEDQ 160
+D+ GS+++Q+KL + +FN + E +++++ + + +V K+ E T + Q
Sbjct: 602 FTKDQHGSRFIQQKLPEATEEEKETIFNEIWEISYELMTDVFGNYVIQKYFEYGTTTQKQ 661
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
+L + S + S+ +G +++ ++A+ N L +++ LK + +
Sbjct: 662 VL-----LESMIGHIHELSLQMYGCRVVQRALEAIDNEGQL--RIIEELKNHILICCKDQ 714
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ V+ + +E+I ++ +I + +L+ H GC + ++ +K IL
Sbjct: 715 NGNHVIQKSIEKIKPF-SQIRYILTSLDNQIYHLSTHPYGCRVIQRLLEYSDINDQKFIL 773
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
++ L + GNYV+QH+LE E I + G + S K S V++ C+
Sbjct: 774 SQLNNFLYYLILDQYGNYVIQHILENGTSEEKEPILEIVLGSVVQFSKHKFASNVIEKCI 833
Query: 341 KYRIT--VNYIVEEFLLNSDQIFR---------------------VACDKYGNYVIQTAL 377
K+ T I+ E ++ ++++ + D++GNYVIQ L
Sbjct: 834 KFGDTNQRQRILHEVMIGNEKMLSNNDDDNSDNDEPVKEDSPLALMVKDQFGNYVIQ-KL 892
Query: 378 IET 380
+E
Sbjct: 893 VEA 895
>gi|241950345|ref|XP_002417895.1| Protein binding to mRNAs encoding chromatin modifiers and spindle
pole body components; involved in longevity, in
maintenance of cell wall integrity, and in sensitivity
to and recovery from pheromone arrest, putative;
RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223641233|emb|CAX45613.1| Protein binding to mRNAs encoding chromatin modifiers and spindle
pole body components; involved in longevity, in
maintenance of cell wall integrity, and in sensitivity
to and recovery from pheromone arrest, putative [Candida
dubliniensis CD36]
Length = 982
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 150/312 (48%), Gaps = 39/312 (12%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSG-----DSRF--LDKVFNVVSEFTFQIICNQYARFVFG 150
S IL LA+D+ G ++LQ+K+ R + +FN + + +++I + + ++
Sbjct: 287 SEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEVIFNQIYSYVYELIVDPFGNYLIQ 346
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K I CNE L + ++I Q LF Q S+++ G+ +++K++ ++ N L L++K LK
Sbjct: 347 KLIVYCNESN-LDLLMEIL-QYNLF-QISINQHGTRALQKIIDSL-NNSHQLGLLIKGLK 402
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ + L + + FIY + ++ +A H+ GC + ++
Sbjct: 403 PYIIELIKDLNGNHVIQKILNK--YEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNH 460
Query: 271 MK----GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
+ G + IL N L + GNYV+Q+++ + I F + ++++
Sbjct: 461 VTLQQLGEFSRAILKF--ENFKLLINDQFGNYVLQYLISINS----LDINFQIFQNFVNF 514
Query: 327 SLT-----KCGSFVVQNCLK-----YRITVNYIVEEF-----LLNSDQIFRVACDKYGNY 371
++ K S VV+ LK + V++ +F +L SD + + D YGNY
Sbjct: 515 GISNLCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSD-LNVLINDPYGNY 573
Query: 372 VIQTALIETMRP 383
VIQT + + P
Sbjct: 574 VIQTMIDIMVNP 585
>gi|121703716|ref|XP_001270122.1| mRNA binding protein Pumilio 2, putative [Aspergillus clavatus NRRL
1]
gi|119398266|gb|EAW08696.1| mRNA binding protein Pumilio 2, putative [Aspergillus clavatus NRRL
1]
Length = 908
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 144/340 (42%), Gaps = 50/340 (14%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 494 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 553
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 554 QKKILANQMKGH---VLALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKC 605
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + FI A LA H GC + ++ + R
Sbjct: 606 VRDQNGNHVIQKAIERV--PSQYVQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCEEEDR 663
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+ IL + L + GNYV+QHV+ E +D + TI S + S K S
Sbjct: 664 ESILAELHACTTHLIPDQFGNYVIQHVIENGEEKDRSRMITIVLS---QLLVYSKHKFAS 720
Query: 334 FVVQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT-----------A 376
VV+ +++ R ++ + + + D+YGNYVIQ
Sbjct: 721 NVVEKSIEFGEESQRRQIISTLTSPNDRGESPLLGLMRDQYGNYVIQKVLGQLKGEEREG 780
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIK 416
LIE +RP L+++L+ +F YGK + K
Sbjct: 781 LIEQIRP--------LLSQLK------KFSYGKQIVAIEK 806
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
VV L + + N+K + Y+ H + + + G + ++ ++Q+
Sbjct: 466 VVRSPLLEEFRANSKGNKRYELKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKEQVFRE 525
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I N L + GNYVVQ + E + + + ++GH + LS G VVQ L++
Sbjct: 526 IQPNCLQLMTDVFGNYVVQKLFEHGNQSQKKILANQMKGHVLALSTQMYGCRVVQKALEH 585
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 586 ILTDQQASMVKEL---ENHVLKCVRDQNGNHVIQKAI 619
>gi|388583020|gb|EIM23323.1| ARM repeat-containing protein [Wallemia sebi CBS 633.66]
Length = 373
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 143/329 (43%), Gaps = 24/329 (7%)
Query: 86 GFQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYA 145
G P H + A D+ GS+++Q+KL + L +VF + T ++ + +
Sbjct: 30 GKHTKPELHNIFGYVTEFATDQLGSRFIQQKLDNAPPESLMRVFEEIFPNTVELSSDVFG 89
Query: 146 RFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLV 205
+V K E +DQ LR+ +I S +G ++K ++ V L+LV
Sbjct: 90 NYVIQKLFEHGTQDQRLRLVNKIKD---CVPTLSFQMYGCRVVQKAIECV-EEAEQLELV 145
Query: 206 MKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMN 265
K ++ + + + + V+ + +E++ +K + + LA H GC +
Sbjct: 146 -KRVETITERAVQDQNANHVIQRIIERV--DPDKLGNFPEVFANNAKELATHPYGCRVLQ 202
Query: 266 NFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYID 325
+ + R ++++ + + +L + GNYVVQ++LE I + + +
Sbjct: 203 RSFEHIGQARSRELIEQLHESVDNLVVDMFGNYVVQYLLEFGTDEDRSRIVVKINQRFFE 262
Query: 326 LSLTKCGSFVVQNCLKYRITVNYIVEEFLL----------NSDQIFRVACDKYGNYVIQT 375
L+ K S V C K I N +E L+ + D I + D++GNYV+Q
Sbjct: 263 LARHKFASNV---CEKALIKANEKDKEMLIYRLIDRSDEASVDGIPSLMKDQFGNYVLQR 319
Query: 376 ALIETMRPNSLHLHQRLVTKLQQNLDSLR 404
A+ R + HL L+ + + LD++R
Sbjct: 320 AINAVSRSQA-HL---LIAAISEELDNIR 344
>gi|427794829|gb|JAA62866.1| Putative translational repressor pumilio/puf3, partial
[Rhipicephalus pulchellus]
Length = 332
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 140/319 (43%), Gaps = 38/319 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VF+ + + ++ + + +V KF E + +
Sbjct: 15 IVEFSQDQHGSRFIQQKLERATLAEKQLVFSEILGAAYNLMTDVFGNYVIQKFFEFGSAE 74
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + L++ + ++ +G I+K +++++ P V+K L +
Sbjct: 75 QKQALALKVKGH---VLPLALQMYGCRVIQKALESIS--PDQQKEVVKELDGHVLKCVKD 129
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + FI A L+ H GC + ++ G + +
Sbjct: 130 QNGNHVVQKCIECV--DPSALQFIINAFQGQVFCLSTHPYGCRVIQRILEHCTGEQTGPV 187
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ G ++RG + LS K S VV+ C
Sbjct: 188 LEELHQHTEQLVQDQYGX--------------------AVRGRVLPLSQHKFASNVVEKC 227
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R ++EE D ++ + D+Y NYV+Q +IE P L L+
Sbjct: 228 VTHASRSERALLIEEVCAYVDGPHSALYTMMKDQYANYVVQK-MIEVAEPPQRKL---LL 283
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ SLR + YGKH+
Sbjct: 284 HKIRPHVPSLRKYTYGKHI 302
>gi|145547968|ref|XP_001459665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427491|emb|CAK92268.1| unnamed protein product [Paramecium tetraurelia]
Length = 640
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 163/369 (44%), Gaps = 24/369 (6%)
Query: 47 PQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANS------GI 100
P+S+ V S N + P + + +FQ Q + + S I
Sbjct: 268 PKSSPIVDSFLFSPKTRNFTPQVGPTQQRVRFQSFQLEEQTQPDEWTEDLQSFEQIRGKI 327
Query: 101 LLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
+ A+ + GS+ +Q+ T+ LD++ + ++ + YA ++FG ++C Q
Sbjct: 328 VNFAKTQHGSRLIQKHFTTCTQIELDQLLQEIGSNIGDLMIDPYANYMFGSLSQSCAPHQ 387
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
L I I+++ V + DK G+ +I+ L+ ++++ ++V ++K L +
Sbjct: 388 RLYILQTISNR---LVDIACDKKGTHAIQSLVSLISSKQE-EEMVENSIKNHIINLTLDS 443
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ ++ + + + ++ + I+ +E + + H+ G + + I + K K
Sbjct: 444 QGTHLIKKIIARF--SEDRLNLIFSKLMEKFIQVVNHQFGLCVLKDLITKFKNNPEKCTF 501
Query: 281 YLISVNAA--SLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
LI + + ++ GNY VQH +++ I + + LS+ K S VV+
Sbjct: 502 ILIKMRDQLDDIVQDPFGNYGVQHAIDVYGDLKCTPIIDKILQKLVQLSIHKYSSNVVEK 561
Query: 339 CL---KYRITVNYIVEEFLLNSDQI-FRVACDKYGNYVIQTALIETMRPNSLHLHQRLVT 394
C+ + +I + L+ D I + +K+G +V+Q AL E + L ++L
Sbjct: 562 CILETSAKTQKRFIKQ---LSQDVICLELMKNKFGTFVLQKALQEAEK---LGEGEQLQQ 615
Query: 395 KLQQNLDSL 403
LQ+NL S+
Sbjct: 616 ALQRNLPSI 624
>gi|353242398|emb|CCA74046.1| related to PUF3-transcript-specific regulator of mRNA degradation
[Piriformospora indica DSM 11827]
Length = 684
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 129/294 (43%), Gaps = 21/294 (7%)
Query: 92 FQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFN-VVSEFTFQIIC-NQYARFVF 149
F HC + D+ GS+++Q+KL + S VF+ V+ F ++ + + +V
Sbjct: 325 FGHCVE-----FSTDQHGSRFIQQKLDTASSDERQAVFDEVIPAGNFSVLAFDVFGNYVI 379
Query: 150 GKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKAL 209
K E + L L ++ + +Q S+D +G ++K + P V+ L
Sbjct: 380 QKLFEYGSP---LHRRLLCSAMEGHVLQLSLDMYGCRVVQKALDC--GTPQQQAAVVSEL 434
Query: 210 KRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFID 269
+ G+ V+ + +E + ++ + + A + LA H GC + I+
Sbjct: 435 NGHVLQCVKDANGNHVIQKIMELV---PSQRNVLLDAFSGNVRNLASHPYGCRVLQRSIE 491
Query: 270 EMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLT 329
+L + N++ L ++ GNYVVQ++LE P + + SLRG+ + ++
Sbjct: 492 HAAPEETASLLEELHQNSSLLMQDQFGNYVVQYILEHGAPAHRDRMIDSLRGNVLSMARH 551
Query: 330 KCGS------FVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
K S +V N ++ R + ++ + + + D+Y NYV+Q A+
Sbjct: 552 KFASNVCEKALLVSNDVQRRALIEEMLAPMSNGTSPVSIMMKDQYANYVLQKAI 605
>gi|440475954|gb|ELQ44600.1| hypothetical protein OOU_Y34scaffold00071g16 [Magnaporthe oryzae
Y34]
gi|440487789|gb|ELQ67564.1| hypothetical protein OOW_P131scaffold00314g137 [Magnaporthe oryzae
P131]
Length = 847
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 130/309 (42%), Gaps = 47/309 (15%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q KL + +S D++F + Q++ + + +V KF E N+
Sbjct: 471 VVEFSGDQHGSRFIQSKLETANSDEKDQIFKELEPNAVQLMKDVFGNYVIQKFFEHGNQV 530
Query: 160 QLLRITLQITSQ---DQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
Q + Q+ + + + V+ + LV + + R++
Sbjct: 531 QKKALASQMKGKMALEHVLVEQQAE----------------------LVKELEVEIVRII 568
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
G+ VV + +E + F+ + + L+ H GC + ++ +
Sbjct: 569 KDAN-GNHVVQKIIELVPRQ--YISFVMDSIRGQVIQLSQHNYGCRVIQRMMEHGSDADK 625
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
I++ + +A L+ + GNYV+QH++ P + + + G + LS K S VV
Sbjct: 626 ATIMHELHQHAPMLTTDPYGNYVIQHIITHGKPEDRQKVISIVLGQIVLLSKHKLASNVV 685
Query: 337 QNCL-----KYRITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQT-----------ALIE 379
+ C+ + R + I+ ++ ++ D+Y NYV+Q A +E
Sbjct: 686 ERCIVSGTAEDRTAIRKIITTPGIDGTSPLQLMMKDQYANYVVQKLLEKLNGAERQAFVE 745
Query: 380 TMRP--NSL 386
M+P NSL
Sbjct: 746 EMKPQFNSL 754
>gi|349603126|gb|AEP99054.1| Pumilio-like protein 2-like protein, partial [Equus caballus]
Length = 235
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 13/208 (6%)
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G+ VV +C+E + FI A L+ H GC + ++ + IL
Sbjct: 19 GNHVVQKCIECV--QPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 76
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK 341
+ + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C+
Sbjct: 77 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 136
Query: 342 Y--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTK 395
+ R +++E +D ++ + D+Y NYV+Q +I+ P + ++ K
Sbjct: 137 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IMHK 192
Query: 396 LQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
++ ++ +LR + YGKH+ ++ L+N
Sbjct: 193 IRPHITTLRKYTYGKHILAKLEKYYLEN 220
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 292 RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNY--I 349
++ +GN+VVQ +E P ++ I + +G LS G V+Q L++ I
Sbjct: 15 KDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 74
Query: 350 VEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNS 385
+EE +++Q+ + D+YGNYVIQ L E RP
Sbjct: 75 LEELHQHTEQLVQ---DQYGNYVIQHVL-EHGRPED 106
>gi|440491702|gb|ELQ74316.1| Translational repressor Pumilio/PUF3, RNA-binding proteins (Puf
superfamily) [Trachipleistophora hominis]
Length = 557
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 141/306 (46%), Gaps = 31/306 (10%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIIC-NQYARFVFGKFIETCNEDQL 161
+ +D++GS+++Q++L ++ +V + +C + + +V K IE N +
Sbjct: 263 IVKDQEGSRFIQKRLELSTE---EEWIWLVKHIRIKELCIDLFGNYVIQKLIE--NRECH 317
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRP-PLLDLVMKALKRLFRLLMMTK 220
IT + + + + SV+ FG +++L+ N + LK L+
Sbjct: 318 GYITQYL---EGCYKEMSVNAFGCRVVQRLLDEDVNEESEYYRRIADELKAHILDLVYDS 374
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ VV + +E+ K DF C+ L+ H+ GC + ++ + I+
Sbjct: 375 NGNHVVQKIVER------KIDF-ENVFYNDCIQLSNHKYGCRVLQKLFEKNESS---TII 424
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
+ N L+ N GNYV+QH++ ++ YL+ + L + SL K S V++ +
Sbjct: 425 NKLIDNCLDLAENQYGNYVLQHIITIKHEYLVR-VSDILSPYIFSFSLHKFASNVIEKII 483
Query: 341 KY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
K +N I+++ L N + I +++ DKY NYV+Q L R +R+V L
Sbjct: 484 KMCDEKQLNGILDDLLAN-NSIVKMSMDKYANYVVQRILESKSR-------ERVVNVLMA 535
Query: 399 NLDSLR 404
N++ LR
Sbjct: 536 NINELR 541
>gi|303324307|ref|XP_003072141.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111851|gb|EER29996.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 835
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 132/294 (44%), Gaps = 33/294 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 447 IVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKLFEHGNQA 506
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM-- 217
Q + Q+ + S +G ++K ++ V LLD +K L ++
Sbjct: 507 QKKALAQQMMGH---ILNLSTQMYGCRVVQKALEHV-----LLDQQAAMVKELENQVIKC 558
Query: 218 -MTKPGSSVVLQCLEQIYHHNNK---NDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
+ G+ V+ + +E++ + + NDF Q A H GC + ++
Sbjct: 559 VKDQNGNHVIQKAIERVPQAHIQFIINDFSGQ-----IQRWAVHSYGCRVIQRMLEHCNE 613
Query: 274 PRRKQILYLISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICFSLRGHYIDLSLT 329
R IL + + +ASL + GNYV+QHV+ E + +I + L + S
Sbjct: 614 ADRDAILAELHLCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQL----VLFSKH 669
Query: 330 KCGSFVVQNCLKYRITVNY--IVEEFLLNSDQ----IFRVACDKYGNYVIQTAL 377
K S VV+ L+Y + I+ F +++ + + D++GNYVIQ L
Sbjct: 670 KFASNVVEKTLEYGGPNDRSEILRIFTTPNERGESPLEGLMKDQFGNYVIQKVL 723
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++++ I NA L + GNYV+Q + E +
Sbjct: 446 HIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKLFEHGNQ 505
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYIVEEFLLNSDQIFRVACDK 367
+ + + GH ++LS G VVQ L++ + +V+E +Q+ + D+
Sbjct: 506 AQKKALAQQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAMVKEL---ENQVIKCVKDQ 562
Query: 368 YGNYVIQTAL 377
GN+VIQ A+
Sbjct: 563 NGNHVIQKAI 572
>gi|321248782|ref|XP_003191239.1| RNA binding protein Pumilio [Cryptococcus gattii WM276]
gi|317457706|gb|ADV19452.1| Pumilio-like protein 2 (Pumilio-2) [Cryptococcus gattii WM276]
Length = 673
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 130/296 (43%), Gaps = 40/296 (13%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ A D+ GS+++Q+KL S K+F+ + +Q++ + + +V K E + D
Sbjct: 298 IVEFAGDQHGSRFIQQKLEIATSEDRQKLFDEIYPNAYQLMTDVFGNYVTQKMFE--HGD 355
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
QL + L D +Q S+ +G ++K + + N ++ +++
Sbjct: 356 QLQKAAL-AKKMDGRVLQLSMQMYGCRVVQKALDHLLN------------EQRAKIVAEL 402
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQ------------AALEHCLYLACHEQGCINMNNF 267
+P +L+C++ +N N + + + + H LA H GC +
Sbjct: 403 EPH---ILECVKS----SNANHVVQRMINIGPPQSIPDSFIGHVEELAKHPYGCRVLQKA 455
Query: 268 IDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
+ ++ ++ +L + L+ + GNYV+Q V+ + +P I L+G L+
Sbjct: 456 FENLEDKMKRSLLDEMHECVIPLTEDQFGNYVIQSVITVGEPEDRNKIINQLKGRITTLA 515
Query: 328 LTKCGSFVVQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
K S VV+ L + R+ + +++ ++Q+ + D Y N+ +QT +
Sbjct: 516 RHKFASNVVEKALIHADPADRRVLIKELIDMQPDGTNQVGMLLRDAYANFPLQTGM 571
>gi|429963921|gb|ELA45919.1| hypothetical protein VCUG_02588 [Vavraia culicis 'floridensis']
Length = 550
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 35/308 (11%)
Query: 103 LAQDEQGSQYLQEKLT-SGDSRFLDKVFNVVSEFTFQIICNQ-YARFVFGKFIETCNEDQ 160
+ +D++GS+++Q++L S D ++ +V + +C + +V K IE N D
Sbjct: 256 IVKDQEGSRFIQKRLELSTDEEWI----WLVKHIKVKELCTDLFGNYVIQKLIE--NRDC 309
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLM-KAVANRPPLLDLVMKALKRLFRLLMMT 219
IT + + + + SV+ FG +++L+ + V + LK L+
Sbjct: 310 HAYITQYL---EGCYKEMSVNAFGCRVVQRLLDEDVNGGGEYYHRIADELKAHILDLVYD 366
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAAL-EHCLYLACHEQGCINMNNFIDEMKGPRRKQ 278
G+ VV + +E+ + +++ C+ L+ H+ GC + ++ +
Sbjct: 367 SNGNHVVQKIVER--------EIDFESVFYNDCIQLSNHKYGCRVLQKLFEKNECS---T 415
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
I+ + N L+ N GNYV+QH++ + YL+ + L + SL K S V++
Sbjct: 416 IIGKLIDNCLDLAENQYGNYVLQHIITIRPEYLVR-VSDILSPYIFSFSLHKFASNVIEK 474
Query: 339 CLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+K +N I++E LL S+ I +++ DKY NYVIQ L R +R+ L
Sbjct: 475 IIKMCDEKRLNSILDE-LLASNCILKMSMDKYANYVIQRILESKSR-------ERVTNVL 526
Query: 397 QQNLDSLR 404
N++ LR
Sbjct: 527 MANVNELR 534
>gi|116207968|ref|XP_001229793.1| hypothetical protein CHGG_03277 [Chaetomium globosum CBS 148.51]
gi|88183874|gb|EAQ91342.1| hypothetical protein CHGG_03277 [Chaetomium globosum CBS 148.51]
Length = 819
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 16/194 (8%)
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
PG S+ L + H + + H + + +Q + ++ R Q+
Sbjct: 411 PGKSLRSVLLHEFKHSPKSKKWELKDIWSHVVEFSGDQQASRFIQQKLETANSDERDQVF 470
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
I NA L ++ GNYV+Q + E D + + +++G +DLS+ VVQ
Sbjct: 471 AEIEPNAVQLMKDVFGNYVMQKLFEYGDQVQKKVLANAMKGKVVDLSMQPYACRVVQKAF 530
Query: 341 KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNL 400
++ I V+ E ++ +VA D++GN+VIQ A++ R +++
Sbjct: 531 EH-ILVDQQTELVKELESEVIKVAKDQHGNHVIQQAIVLVPR---------------EHI 574
Query: 401 DSLRFGYGKHVYNF 414
D + G H+Y
Sbjct: 575 DCMMAGLNGHIYEL 588
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 111/246 (45%), Gaps = 13/246 (5%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
S ++ + D+Q S+++Q+KL + +S D+VF + Q++ + + +V K E
Sbjct: 439 SHVVEFSGDQQASRFIQQKLETANSDERDQVFAEIEPNAVQLMKDVFGNYVMQKLFEYG- 497
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL-FRLL 216
DQ+ + L + ++ V S+ + ++K + + L+D + +K L ++
Sbjct: 498 -DQVQKKVLANAMKGKV-VDLSMQPYACRVVQKAFEHI-----LVDQQTELVKELESEVI 550
Query: 217 MMTKP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP 274
+ K G+ V+ Q + + + D + H LA H+ GC + ++
Sbjct: 551 KVAKDQHGNHVIQQAIVLVPREHI--DCMMAGLNGHIYELAAHQYGCRVVQRVLERGTET 608
Query: 275 RRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
+ ++ + +A L + GNYV+QHVLE P + + + LS K S
Sbjct: 609 DKAAVMSELHDSAELLITDMYGNYVIQHVLEKGRPEDRGRMISVITPQLLTLSRHKNASN 668
Query: 335 VVQNCL 340
VV+ C+
Sbjct: 669 VVEKCI 674
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 122/297 (41%), Gaps = 56/297 (18%)
Query: 125 LDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFG 184
L +++ V EF+ Q +RF+ K +ET N D+ ++ +I VQ D FG
Sbjct: 434 LKDIWSHVVEFSGD---QQASRFIQQK-LETANSDERDQVFAEIEPN---AVQLMKDVFG 486
Query: 185 SSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIY 244
+ ++KL + D V K ++L G V L Q Y +
Sbjct: 487 NYVMQKLFE-------YGDQVQK------KVLANAMKGKVVDLSM--QPYACR-----VV 526
Query: 245 QAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL 304
Q A EH L +D+ + +++ + ++++ GN+V+Q +
Sbjct: 527 QKAFEHIL---------------VDQ-----QTELVKELESEVIKVAKDQHGNHVIQQAI 566
Query: 305 ELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI-TVNYIVEEFLLNSDQIFRV 363
L I+ + L GH +L+ + G VVQ L+ T V L +S ++ +
Sbjct: 567 VLVPREHIDCMMAGLNGHIYELAAHQYGCRVVQRVLERGTETDKAAVMSELHDSAEL--L 624
Query: 364 ACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIKDCDL 420
D YGNYVIQ L E RP R+++ + L L K+ N ++ C L
Sbjct: 625 ITDMYGNYVIQHVL-EKGRPED---RGRMISVITPQL--LTLSRHKNASNVVEKCIL 675
>gi|255948592|ref|XP_002565063.1| Pc22g11140 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592080|emb|CAP98402.1| Pc22g11140 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 839
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 135/327 (41%), Gaps = 56/327 (17%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+Q S +LQ+KL G + + + + ++ N++ F+ + E +Q++ I
Sbjct: 477 DQQASIFLQQKLKVGTTEQKYDIIESIVRQAYPLMVNRFGNFLIQRCFEHGTPEQVIAIA 536
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKR-------------- 211
I + S+D FG ++K V+ + +V + L+R
Sbjct: 537 NAIRGNT---LNLSMDAFGCHVVQKAFDCVSEEHKAM-MVHELLRRIPETVVHRYACHVW 592
Query: 212 --LFRLLMMTKPGS--SVVLQCLEQIYHH---NNKNDFIYQAALEHCLYLACHEQGCINM 264
LF L +P + V + L ++H + Q E+C
Sbjct: 593 QKLFELRWSGEPPQVMARVNEALRGMWHEVALGETGSLVVQNIFENC------------- 639
Query: 265 NNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYI 324
++E K P +++L I V L+ GN+ +QH+ E P+ + +
Sbjct: 640 ---VEEEKRPAIEEVLAKIDV----LAHGQFGNWCIQHICEHGAPHDKSRAVEHVLRWAV 692
Query: 325 DLSLTKCGSFVVQNCLKYRITV---NYIVEEFLLNSDQ----IFRVACDKYGNYVIQTAL 377
D S+ + S +V+ CLK T +Y+ SD+ + +A D+YGNY+IQ L
Sbjct: 693 DYSMDQFASKIVEKCLKIGGTEFMDHYLSRVCTGRSDRPRMPLIDIAGDQYGNYLIQWIL 752
Query: 378 IETMRPNSLHLHQRLVTKLQQNLDSLR 404
+ + H + + + +++++ SLR
Sbjct: 753 MNA----APHQRELVASHIRKHMVSLR 775
>gi|121717586|ref|XP_001276094.1| Pumilio-family RNA binding repeat protein [Aspergillus clavatus
NRRL 1]
gi|119404292|gb|EAW14668.1| Pumilio-family RNA binding repeat protein [Aspergillus clavatus
NRRL 1]
Length = 771
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 143/315 (45%), Gaps = 32/315 (10%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+Q S +LQ+KL G + + ++ + ++ N++ F+ + E +Q++ I
Sbjct: 409 DQQASIFLQQKLKVGTTEQKYDIIEAITHQAYPLMVNRFGNFLVQRCFEHGTPEQVVAIA 468
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSV 225
I + S+D FG ++K+ V + +V + L+R+ ++ +
Sbjct: 469 NAIKGNT---LSLSMDPFGCHVVQKVFDCVPEEHKAV-MVHELLRRIPETVIHRY--ACH 522
Query: 226 VLQCLEQIYHHNNKNDFIYQA--ALEHCLY-LACHEQGCINMNNF----IDEMKGPRRKQ 278
V Q L ++ N + + AL + +A E G + + N +++ K P ++
Sbjct: 523 VWQKLFELRWSNEPPQIMEKVNEALRGMWHEVALGETGSLVVQNIFENCVEDEKRPAIEE 582
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+L I V L+ GN+ +QH+ E P+ + +D S+ + S +V+
Sbjct: 583 VLAKIDV----LAHGQFGNWCIQHICEHGAPHDKNRAIEHILLRSVDYSMDQFASKIVEK 638
Query: 339 CLKYRITVNYIVEEFLL-----NSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHLH 389
CLK I + ++ +L +D+ + +A D+YGNY+IQ L+ + H
Sbjct: 639 CLK--IGGSDFLDRYLSRVCTGRTDRPRMPLIDIAGDQYGNYLIQWILLNA----APHQR 692
Query: 390 QRLVTKLQQNLDSLR 404
+ + T +++++ SLR
Sbjct: 693 ELVATHIRKHMVSLR 707
>gi|307102758|gb|EFN51026.1| hypothetical protein CHLNCDRAFT_28462 [Chlorella variabilis]
Length = 393
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 139/315 (44%), Gaps = 18/315 (5%)
Query: 105 QDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRI 164
+D+ GS+ +Q++L + L +F V ++ + + +V +F+E + +
Sbjct: 22 RDQHGSRLVQQQLETAAPEELTALFGEVRHKLLPLMVDVFGNYVVQRFLERGGAEVQAAV 81
Query: 165 TLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSS 224
I + + S+ +G ++K ++ + + + + + L + + G+
Sbjct: 82 AEAIRGK---ALPLSLQMYGCRVVQKALEVLPQQQRVS--ICRELTEHTLRCVRDQNGNH 136
Query: 225 VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK-GPRRKQILYLI 283
VV +C+E + D I + + L+ H GC + ++ R++++ +
Sbjct: 137 VVQKCIECVQPSGPARDMI-EIIVNKGQALSTHTFGCRLVQRVLEFCSIAELREKVISDV 195
Query: 284 SVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR 343
+ LS + GNYVVQH++ E+I + + L+ K S VV+ CLK+
Sbjct: 196 LDSTLQLSHDQYGNYVVQHLVAKGPGPARESIVAKVAPQVMTLAQHKYASNVVEACLKHS 255
Query: 344 ------ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
V+ ++ E + + D+YGNYV+Q AL P L+ ++
Sbjct: 256 GQAHRDAIVDQMIRESGARPAALTALMRDQYGNYVVQRALEVATPPQRA----ALLAAIK 311
Query: 398 QNLDSL-RFGYGKHV 411
+LD+L ++ YGKH+
Sbjct: 312 PHLDALKKYTYGKHI 326
>gi|156845539|ref|XP_001645660.1| hypothetical protein Kpol_541p44 [Vanderwaltozyma polyspora DSM
70294]
gi|156116326|gb|EDO17802.1| hypothetical protein Kpol_541p44 [Vanderwaltozyma polyspora DSM
70294]
Length = 756
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 164/378 (43%), Gaps = 62/378 (16%)
Query: 40 SPPVPLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSG 99
+PP + P + P+L ++ P+L +N + T +S+ L + P
Sbjct: 68 APPFEIEPNN----PNLKNGNSTPSLLCNNNIKTTTQSSN-----LDIHSIPLLEL---D 115
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFL--DKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
+ LA D+ G ++LQ+KL S + D ++ + ++ + + ++ K E N
Sbjct: 116 YVKLATDQYGCRFLQKKLESPSESMIVKDVLYEQIKPIILDLMLDPFGNYLIQKLSEYIN 175
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL-- 215
Q +L I S Q S++++G+ S +K++ + N + D+++K ++ +
Sbjct: 176 SSQR---SLIIQSIYPHVFQLSINQYGTRSFQKIIDTIDNEAQI-DMIIKGFEQEYTTIK 231
Query: 216 ----LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAAL--EHCLYLACHEQGCINMNNFID 269
L+ G+ V+ +C+ + +K +FI A + ++ + ++ H+ GC +
Sbjct: 232 QIVTLINDLNGNHVIQKCI--LKFPTSKFNFIINAMVHEDNIIAISTHKHGCC----VLQ 285
Query: 270 EMKGPRRKQILYLISVNAASLSRNFS----GNYVVQHVLELE--DPYLIETICFSLRGHY 323
++ Q + IS+ N GNY++Q +L++ D YL+ I +
Sbjct: 286 KLLSVSTLQQFFKISIKIVEYLPNLINDQFGNYIIQFLLDVRELDFYLVSEIYKKIELSL 345
Query: 324 IDLSLTKCGSFVVQNCLK--YRITVNYIV---EEFLLNSDQIF----------------- 361
LS K S V++ +K Y++ +YI+ E SD +F
Sbjct: 346 CQLSRLKFSSNVIEKFIKKIYKVMTSYIIPRKESSSNTSDDLFISTVGILFSIIDLFTNN 405
Query: 362 --RVACDKYGNYVIQTAL 377
+ D YGNYV+QT L
Sbjct: 406 LSNIIRDNYGNYVLQTLL 423
>gi|342321718|gb|EGU13650.1| Hypothetical Protein RTG_00087 [Rhodotorula glutinis ATCC 204091]
Length = 949
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 137/321 (42%), Gaps = 20/321 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q KL + + + VF + Q+ + +A +V KF E ++
Sbjct: 594 MVEFSGDQLGSRHIQTKLETATTEERNMVFKEILPNMLQLSTDVFANYVIQKFFEQGSQV 653
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL-FRLLMM 218
Q + + +Q S+ +G ++K ++ V L+D ++ +K L +L
Sbjct: 654 QKTAMAKVLEGH---VLQLSLQMYGCRVVQKALEYV-----LVDQQVRLVKELDGNVLKC 705
Query: 219 TKPGSS--VVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ S V+ + LE++ + FI A + LA H GC + + +
Sbjct: 706 ARDAQSNHVIQRALERVPPEHLL--FITNACVGEVHSLATHPYGCRVLQRIFENCPAHQT 763
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ +L + + L ++ GNYVVQ VLE D + + G + L+ K S VV
Sbjct: 764 RTLLDELHRSTQHLIQDQYGNYVVQWVLEKGDTADRSLVIAKVYGQLLPLAQQKFASNVV 823
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+ C+ Y R ++ +++ S I + Y NYVIQ L + P L
Sbjct: 824 EKCILYGTDDERRRLIDEVLQTGHDGSSTIKAMLVHPYANYVIQKCLHSALSPQREALFA 883
Query: 391 RLVTKLQQNLDSLRFGYGKHV 411
++ NL Y KH+
Sbjct: 884 ETTQQI-LNLRKYSTTYSKHL 903
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 6/155 (3%)
Query: 234 YHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRN 293
+ N + Q H + + + G ++ ++ R + I N LS +
Sbjct: 577 FRSNRNRSWELQDLAGHMVEFSGDQLGSRHIQTKLETATTEERNMVFKEILPNMLQLSTD 636
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYI--VE 351
NYV+Q E + L GH + LSL G VVQ L+Y + + V+
Sbjct: 637 VFANYVIQKFFEQGSQVQKTAMAKVLEGHVLQLSLQMYGCRVVQKALEYVLVDQQVRLVK 696
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
E N + + A D N+VIQ AL E + P L
Sbjct: 697 ELDGN---VLKCARDAQSNHVIQRAL-ERVPPEHL 727
>gi|71654531|ref|XP_815883.1| pumilio/PUF RNA binding protein 5 [Trypanosoma cruzi strain CL
Brener]
gi|70880972|gb|EAN94032.1| pumilio/PUF RNA binding protein 5, putative [Trypanosoma cruzi]
Length = 418
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 126/264 (47%), Gaps = 14/264 (5%)
Query: 122 SRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVD 181
S L++ F VV + C R + + + D++ I ++ Q + ++D
Sbjct: 107 SNLLEQFFAVVGNIP-RTACTVTGRHLLVSVLRLQHTDKVQIIIDELLPQLNIV---ALD 162
Query: 182 KFGSSSIRKLMKAVANRPPLLDLVMK--ALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNK 239
+ G +R L++ ++ LL+ ++ A K + L + ++ VV E+ H +
Sbjct: 163 QQGCHVVRALIELISTE--LLETILPHFAPKTIIELAVSSQHTRRVVQSIFER--HKSEA 218
Query: 240 NDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYV 299
I + LA +QGCI + I+ +R+ ++ ++ SL+ N GNYV
Sbjct: 219 LTPIVTTIAQSGQQLAVSQQGCIAVIRTIENSLPHQRRSVISMLLPVLPSLTMNCYGNYV 278
Query: 300 VQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLN 356
VQ +L+ ++ L+ +C + GH++ LS K S V++ + + +V+E +++
Sbjct: 279 VQCLLQHMDHASLVSVVCHNFAGHWLTLSCNKFASNVIEKVVWQLDGVARKEVVDELVMD 338
Query: 357 SDQIFRVACDKYGNYVIQTALIET 380
+ + + D +GN+V+Q A+I++
Sbjct: 339 ASNLRCLMQDGFGNFVLQ-AIIDS 361
>gi|320584088|gb|EFW98300.1| hypothetical protein HPODL_0192 [Ogataea parapolymorpha DL-1]
Length = 959
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 182/416 (43%), Gaps = 44/416 (10%)
Query: 29 PSYSSFNEIHPSPPV------PLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQ 82
PS+S + + PPV PL ++ A PS +G P L + +P+ + +
Sbjct: 352 PSFSPYGFVASPPPVVPAEVSPLQHEAHIA-PSKAGSPGKP-LKKSISPKPAKMKKHIVR 409
Query: 83 TPLGFQANPFQHCANSGILL---------LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVS 133
+PL F++ N L A+D+ GS+++Q++L + R + +FN +
Sbjct: 410 SPL---LEEFRNNKNKEYTLKDIYGHGYEFAKDQHGSRFIQQQLALSNDRDKEVIFNEIR 466
Query: 134 EFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMK 193
++ + + +V K+ E N+ Q + S F S+ +G ++K ++
Sbjct: 467 NHAMDLMTDVFGNYVIQKYFEHGNDVQR---KVMFESMRGSFYDLSLQMYGCRVVQKGLE 523
Query: 194 AVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLY 253
A+ L ++ L+ LL+ + G+ V+ + +E I K FI + +
Sbjct: 524 ALQLEEQL--QILDELRENILLLVKDQNGNHVIQKSIECI--PIAKIPFILDSIKHQIYH 579
Query: 254 LACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIE 313
L+ H GC + ++ ++ IL + L ++ GNYV+QHV+E +
Sbjct: 580 LSTHPYGCRVIQRLLEFSDQTDQQFILDELKDYVYYLIQDQFGNYVIQHVVEHGSVKYTD 639
Query: 314 TICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNY--IVEEFLLNS----DQIFRVAC-- 365
I + + ++LS K S V+ C+ ++ N I +E + ++ ++ +C
Sbjct: 640 EILQVVLENLVELSKHKFASNAVEKCIIHQTEENRGKIYKEIMRDNMDPHGKLDENSCLC 699
Query: 366 ----DKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
D + NYV+Q L+E + L LV K++ L + + YGKH+ + K
Sbjct: 700 LMMKDPFANYVVQK-LVELIDDEKKGL---LVKKIRDYLKLISKNNYGKHLASIEK 751
>gi|268579547|ref|XP_002644756.1| C. briggsae CBR-PUF-9 protein [Caenorhabditis briggsae]
Length = 709
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 149/325 (45%), Gaps = 25/325 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ A+D+ GS+++Q+KL R +F V E +++ + + +V KF E N +
Sbjct: 347 VIEYAKDQHGSRFIQQKLERASPRDKAVIFTPVLENAEELMTDVFGNYVIQKFFEFGNNE 406
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + I ++ ++ +G I+K ++ V + ++ ++ +
Sbjct: 407 QRNLLVGTIRGN---VMKLALQMYGCRVIQKALEYVEEK--YQHEILGEMEGQVLKCVKD 461
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAAL----EHCLYLACHEQGCINMNNFIDEMKGPR 275
+ G+ V+ + +E++ + FI A ++ L+ H GC + ++ +
Sbjct: 462 QNGNHVIQKVIERV--EPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCSDDQ 519
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFS-LRGHYIDLSLTKCGSF 334
++ +L + ++ L + GNYV+QHV+E E I + + + K S
Sbjct: 520 KQPVLDALHIHLKQLVLDQYGNYVIQHVIEHGSASDKEKIVQDVISDDLLKFAQHKFASN 579
Query: 335 VVQNCLKY--RITVNYIVEEFLLN----SDQIFRVACDKYGNYVIQTALIETMRPNSLHL 388
V++ CL Y N I+++ + S + ++ D + NYV+Q +++ P
Sbjct: 580 VIEKCLTYGGHAERNLIIDKVCGDPNDPSPPLLQMMKDPFANYVVQK-MLDVADPQ---- 634
Query: 389 HQRLVT-KLQQNLDSLR-FGYGKHV 411
H++ +T ++ ++ +LR + +GKH+
Sbjct: 635 HRKKITLTIKPHIATLRKYNFGKHI 659
>gi|354545908|emb|CCE42637.1| hypothetical protein CPAR2_202800 [Candida parapsilosis]
Length = 986
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 144/309 (46%), Gaps = 33/309 (10%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSG-------DSRFLDKVFNVVSEFTFQIICNQYARFVFG 150
S IL LA+D+ G ++LQ+K+ + + +F+ V + ++I + + ++
Sbjct: 293 SEILKLAKDQYGCRFLQKKIDENLIPSYQVRAANFEIIFDQVYPYMCELIVDPFGNYLVQ 352
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K I C D L + L+I + Q S+++ G+ +++K++ + N L+L++K LK
Sbjct: 353 KMIPYC-SDANLDLMLEILQYN--LCQISINQHGTRALQKIIDNL-NSTSQLNLLIKGLK 408
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ + L + N + FIY + +E +A H+ GC + ++
Sbjct: 409 PYIIELIRDLNGNHVIQKILNKYEPPNCQ--FIYDSIIEDLYTVATHKHGCCVLQKCLNH 466
Query: 271 MKGPRRKQILYLISV--NAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHY----I 324
+ + Q I N L + GNYV+Q+++ + IE C + +
Sbjct: 467 VTQQQLNQFSKAILKFDNFKMLINDQFGNYVLQYLISINS---IEVSCEMFQNFFQFGLT 523
Query: 325 DLSLTKCGSFVVQNCLKYRITVNYIVE--------EFLLN--SDQIFRVACDKYGNYVIQ 374
+L +K S VV+ +K N +V+ E + N ++ + + D +GNYVIQ
Sbjct: 524 NLCNSKFSSNVVEKFMK-NCYNNEVVDVAFADLKFELIYNILANDLNVLVNDPFGNYVIQ 582
Query: 375 TALIETMRP 383
T L + P
Sbjct: 583 TMLDILINP 591
>gi|258571557|ref|XP_002544582.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904852|gb|EEP79253.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1139
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 123/293 (41%), Gaps = 69/293 (23%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G +YLQ KL + +F +++ + + ++ K +E N++Q
Sbjct: 778 LCKDQHGCRYLQRKLEERIPENVQMIFLETHMHVVELMTDPFGNYLCQKLLEFSNDEQ-- 835
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
R L + QL V ++++ G+ +++K+++ ++ P V+ AL+ L+ G
Sbjct: 836 RTALINNAAPQL-VSIALNQHGTRALQKMIEFIST-PEQTQTVINALRGKVVELVQDLNG 893
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL ++ + ++ F
Sbjct: 894 NHVIQKCLNRLSVADAQDPF---------------------------------------- 913
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK- 341
GNYVVQ++L+L +P+ E +C + G LS K S V++ C +
Sbjct: 914 -------------GNYVVQYILDLAEPHFTEPLCQTFVGKVSMLSKQKFSSNVIEKCPRT 960
Query: 342 YRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT-----------ALIETMRP 383
++ + +L + ++ R+ D + NYV+QT ALIE +RP
Sbjct: 961 AEFQSRRLLIQEMLPAQELERMLRDSFANYVVQTAMDYADPETRVALIEAIRP 1013
>gi|308502562|ref|XP_003113465.1| CRE-PUF-8 protein [Caenorhabditis remanei]
gi|308263424|gb|EFP07377.1| CRE-PUF-8 protein [Caenorhabditis remanei]
Length = 536
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 180/436 (41%), Gaps = 62/436 (14%)
Query: 14 LNNLSLSFENLQVN--------------DPSYSSFNEIHPS---PPVPLYPQSTWAVPSL 56
+NNLSL N+ ++ PS S PS +P++ T VP
Sbjct: 100 INNLSLHLNNMSLHLNSMNNNYLNPNWNAPSMFSLTSPLPSHSCTDIPIHQAPTLRVPVQ 159
Query: 57 SGRSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGI----LLLAQDEQGSQY 112
+T S P E+ + + + +++NP + S I + A+D+ GS++
Sbjct: 160 CSSAT----DIFSPPSRESTSPDDLLS--RYRSNPMKGLKLSDIRGQVIKFAKDQVGSRF 213
Query: 113 LQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQD 172
+Q+KL DS+ D +F+ V +++ + + +V KF E E R+
Sbjct: 214 IQQKLEFCDSKEKDAIFDEVVAHAPELVDDIFGNYVVQKFFEYGEEKHWARL-------- 265
Query: 173 QLFVQASVDK-----FGSSSIRKLMKAVAN-RPPLLDLVMKALKRLFRLLMMTKPGSSVV 226
V A VD+ F + R L KA+ PL ++ ++ + M + G+ V+
Sbjct: 266 ---VDAVVDRIPEYAFQMYACRVLQKALEKVSEPLQIKILARVRHVIHRCMKDQNGNHVI 322
Query: 227 LQCLEQIYHHNNKNDFIYQAALEH--CLY-LACHEQGCINMNNFIDEMKGPRRKQILYLI 283
+ +E++ FI LE+ +Y ++ GC + ++ + + ++ I
Sbjct: 323 QKAIEKV--SPPYVQFIVSTLLENPDTIYDMSVDPYGCRVVQRCLEHCIPQQTRPVIERI 380
Query: 284 SVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYR 343
++ N GNYVVQHV+ I + + + S K S V++ CL+ R
Sbjct: 381 HERFDDIANNQYGNYVVQHVILHGSDADRMLIVNRVADNLFEFSTHKYSSNVIEKCLE-R 439
Query: 344 ITVNYIVEEFLLNSDQ-------IFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+++ Q + ++ D+Y NYV+Q + + L+ +
Sbjct: 440 GAIHHKAMLVGAACSQPEGCMPIVVQMMKDQYANYVVQKMFDQVTSDQ----RRELILTV 495
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ LR F +GKH+
Sbjct: 496 RSHIPVLRQFPHGKHI 511
>gi|390598145|gb|EIN07544.1| hypothetical protein PUNSTDRAFT_53691 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 570
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 138/318 (43%), Gaps = 25/318 (7%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFN--VVSEFTFQIICNQYARFVFGKFIETCNEDQLLR 163
D+ GS+++Q+KL + + VF V Q+ + + +V K +E C+ Q R
Sbjct: 247 DQHGSRFIQQKLEGASAEEREAVFAEIVPGGHALQLTQDVFGNYVVQKLLEHCSPAQ--R 304
Query: 164 ITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGS 223
+ + D + S+ +G ++K ++ + V + + R + G+
Sbjct: 305 VAIAECLSDHVLA-LSLQMYGCRVVQKALEYLPESH-QAKFVRELEPHVIRCVKDAN-GN 361
Query: 224 SVVLQCLEQIYHHNNKNDFIYQAALE-HCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
V+ + +E++ N + + + H LA H GC + ++ + + + +L
Sbjct: 362 HVIQKIIERV----NPSLLTFVNGFQSHVFELASHPYGCRVLQRCLEYLSPEQTRGLLAE 417
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL-- 340
+ L ++ GNYV+Q VLE P + LRG + ++ K S V + L
Sbjct: 418 LHECTIQLMQDQFGNYVIQFVLEHGAPQDRAEVVQKLRGQMLPMARHKFASNVCEKALVT 477
Query: 341 ----KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
R ++ I+ + S I + D+Y NYV+Q A + T P+ + L++++
Sbjct: 478 AEPDSRRALIDEILAQGADGSSPIVTMMKDQYANYVLQRA-VSTAEPDQ---QETLISRI 533
Query: 397 QQNLDSLRF---GYGKHV 411
+ L ++R Y KH+
Sbjct: 534 RPQLLTMRRYNNAYTKHL 551
>gi|361128047|gb|EHK99999.1| putative Pumilio like protein [Glarea lozoyensis 74030]
Length = 447
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 136/309 (44%), Gaps = 30/309 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S +++F + Q++ + + +V K E N+
Sbjct: 52 VVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGNQI 111
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + ++ S+ +G ++K ++ V L D + ++ L ++
Sbjct: 112 QKRVLAEQMKNH---VMELSMQMYGCRVVQKALEHV-----LADQQAELVEELRSDVLKC 163
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ VV + +E++ + + F+ A LA H GC + ++ K +
Sbjct: 164 VKDQNGNHVVQKAIERVPTEHIQ--FVIDAFRGQVHVLATHPYGCRVIQRILEYCKPHDQ 221
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+L + A+ L + GNYV QHV++ P I + + LS K S VV
Sbjct: 222 AVVLEELHQCASMLITDQYGNYVTQHVIQHGKPEDRAKIIKIITAQLLTLSKHKFASNVV 281
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL-----------IE 379
+ +++ + V + S + + D+YGNYVIQ L +E
Sbjct: 282 EKSIQFGTSEQRKAIVAQLTAMHSDGSSPLQLMMKDQYGNYVIQKLLGQLKGEERDNFVE 341
Query: 380 TMRPNSLHL 388
M+P + L
Sbjct: 342 DMKPQLIQL 350
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ ++Q+ I NA L + GNYV+Q + E +
Sbjct: 51 HVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGNQ 110
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNY--IVEEFLLNSDQIFRVACDK 367
+ ++ H ++LS+ G VVQ L++ + +VEE L SD + + D+
Sbjct: 111 IQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVEE--LRSD-VLKCVKDQ 167
Query: 368 YGNYVIQTAL 377
GN+V+Q A+
Sbjct: 168 NGNHVVQKAI 177
>gi|294953151|ref|XP_002787620.1| pumilio, putative [Perkinsus marinus ATCC 50983]
gi|239902644|gb|EER19416.1| pumilio, putative [Perkinsus marinus ATCC 50983]
Length = 645
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 139/320 (43%), Gaps = 17/320 (5%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
LA D+ GS++LQ L + VF V Q+ + + +V K + E+ ++
Sbjct: 301 LAMDQYGSRFLQNALETATPSERHDVFLAVLSSAQQLTTDPFGNYVIQKLFDHLPEEHIV 360
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
++ Q+ ++ S +G ++K+++ V +L ++ LK + + G
Sbjct: 361 ILSEQLLGD---ILRLSFHMYGCRVVQKVLENVNAEQQVL--IVNELKGHVVDCVEDQNG 415
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+E + FI + ++ H GC + I+ + + ++
Sbjct: 416 NHVIQKCIETL--PTQTLGFIVDEFRGNVTRMSLHCYGCRVVQRLIERLPEEMSEPLMQE 473
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL-- 340
+ N LS++ GNYVVQHV+E + ++ + K S VV+ L
Sbjct: 474 VVENLWMLSQDQYGNYVVQHVVEHGPNNFKNAVVKAVAANIEQYGCHKFASNVVEKALLS 533
Query: 341 KYRITVNYIVEEFLLNSD---QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
R + I+ + ++ + + DK+ NYV+Q L + N H LV LQ
Sbjct: 534 GSRQNQDEIIGAVIGSAGPDAPLHSMTVDKFANYVVQRCLELSQGTNREH----LVNMLQ 589
Query: 398 QNLDSLR-FGYGKHVYNFIK 416
+L +LR YGKH+ + ++
Sbjct: 590 LDLPNLRKVTYGKHIASAVE 609
>gi|407853402|gb|EKG06417.1| pumilio/PUF RNA binding protein 5, putative, partial [Trypanosoma
cruzi]
Length = 445
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 126/264 (47%), Gaps = 14/264 (5%)
Query: 122 SRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVD 181
S L++ F VV + C R + + + D++ I ++ Q + ++D
Sbjct: 134 SNLLEQFFAVVGNIP-RTACTVTGRHLLVSVLRLQHTDKVQIIIDELLPQLNIV---ALD 189
Query: 182 KFGSSSIRKLMKAVANRPPLLDLVMK--ALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNK 239
+ G +R L++ ++ LL+ ++ A K + L + ++ VV E+ H +
Sbjct: 190 QQGCHVVRALIELISTE--LLETILPHFAPKTIIELAVSSQHTRRVVQSIFER--HKSEA 245
Query: 240 NDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYV 299
I + LA +QGCI + I+ +R+ ++ ++ SL+ N GNYV
Sbjct: 246 LTPIVTTIAQSGQQLAVSQQGCIAVIRTIENSLPHQRRSVISMLLPVLPSLTMNCYGNYV 305
Query: 300 VQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLN 356
VQ +L+ ++ L+ +C + GH++ LS K S V++ + + +V+E +++
Sbjct: 306 VQCLLQHMDHASLVSVVCHNFAGHWLTLSCNKFASNVIEKVVWQLDGVARKEVVDELVMD 365
Query: 357 SDQIFRVACDKYGNYVIQTALIET 380
+ + + D +GN+V+Q A+I++
Sbjct: 366 ASNLRCLMQDGFGNFVLQ-AIIDS 388
>gi|294656065|ref|XP_458303.2| DEHA2C14278p [Debaryomyces hansenii CBS767]
gi|199430829|emb|CAG86381.2| DEHA2C14278p [Debaryomyces hansenii CBS767]
Length = 658
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 142/317 (44%), Gaps = 53/317 (16%)
Query: 100 ILLLAQDEQGSQYLQEKLTSG-------DSRFLDKVFNVVSEFTFQIICNQYARFVFGKF 152
IL LA+D+ G ++LQ+K+ + +F V F +++I + + ++ K
Sbjct: 138 ILKLAKDQYGCRFLQKKIDENVIPSSQIRTENFKVIFKEVYPFIYELIIDPFGNYLVQKL 197
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL 212
I+ C +D L + L+I Q LF Q S+++ G+ +++K++ ++ N L L++ L
Sbjct: 198 IDYC-DDANLSLILEIL-QYNLF-QISINQHGTRALQKIINSLNNDYQ-LSLLISGLNPF 253
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMN---NFID 269
L+ G+ V+ + L + N + FIY + + +A H+ GC + N ++
Sbjct: 254 IIELIKDLNGNHVIQKILNKYSPENCQ--FIYDSIINDLYVVATHKHGCCVLQKCLNHVN 311
Query: 270 EMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLT 329
M+ + Q + + L+ + GNYV+Q+++ I +I +L+ +
Sbjct: 312 SMQLVQFSQKILMFDT-FRKLTNDQFGNYVLQYLIS------INSISINLKMY------E 358
Query: 330 KCGSFVVQNCLKYRITVNYIVEEFLLN-----------------------SDQIFRVACD 366
F V N + + N +VE+FL N + ++ D
Sbjct: 359 NFMKFGVNNLCNLKFSSN-VVEKFLKNCYVNEPNSPAFSNLKLELCLQVMQGDLNKMIND 417
Query: 367 KYGNYVIQTALIETMRP 383
+GNYVIQT + + P
Sbjct: 418 PFGNYVIQTLIDILVNP 434
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 290 LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYI 349
L ++ +GN+V+Q +L P + I S+ ++ K G V+Q CL + ++ +
Sbjct: 257 LIKDLNGNHVIQKILNKYSPENCQFIYDSIINDLYVVATHKHGCCVLQKCLNHVNSMQLV 316
Query: 350 -VEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYG 408
+ +L D ++ D++GNYV+Q + +L +++ + NL +L+F
Sbjct: 317 QFSQKILMFDTFRKLTNDQFGNYVLQYLISINSISINLKMYENFMKFGVNNLCNLKFS-S 375
Query: 409 KHVYNFIKDC 418
V F+K+C
Sbjct: 376 NVVEKFLKNC 385
>gi|317148458|ref|XP_001822786.2| pumilio-family RNA binding repeat protein [Aspergillus oryzae
RIB40]
Length = 857
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 139/329 (42%), Gaps = 60/329 (18%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+Q S +LQ+KL G + ++ ++ + ++ N++ F+ + E +Q++ I
Sbjct: 495 DQQASIFLQQKLKVGTAEQKYEIIEAIAHQAYPLMINRFGNFLVQRCFEHGTPEQIVAIA 554
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKR-------------- 211
I + S+D FG I+K V + +V + L+R
Sbjct: 555 NAIKGNT---LSLSMDPFGCHVIQKAFDCVPEEHKAV-MVHELLRRIPETVIHRYACHVW 610
Query: 212 --LFRLLMMTKPGS--SVVLQCLEQIYHH---NNKNDFIYQAALEHCLYLACHEQGCINM 264
LF L +P + V + L ++H + Q E+C
Sbjct: 611 QKLFELRWSGEPPQIMAKVNEALRGMWHEVALGETGSLVVQNIFENC------------- 657
Query: 265 NNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYI 324
+++ K P +++L I + L+ GN+ +QH+ E P+ + +
Sbjct: 658 ---VEDEKRPAIEEVLTKIDL----LAHGQFGNWCIQHICEHGAPHDKNRAIEHILLWSV 710
Query: 325 DLSLTKCGSFVVQNCLKYRITVNYIVEEFLL-----NSDQ----IFRVACDKYGNYVIQT 375
D S+ + S +V+ CLK I + ++ +L +D+ + +A D+YGNY+IQ
Sbjct: 711 DYSMDQFASKIVEKCLK--IGGSEFLDRYLTRVCTGRTDRPRMPLIDIAGDQYGNYLIQW 768
Query: 376 ALIETMRPNSLHLHQRLVTKLQQNLDSLR 404
L+ +LH + + + +++++ SLR
Sbjct: 769 ILMNA----ALHQRELVASHIRKHMVSLR 793
>gi|238503363|ref|XP_002382915.1| Pumilio-family RNA binding repeat domain protein [Aspergillus
flavus NRRL3357]
gi|83771521|dbj|BAE61653.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220691725|gb|EED48073.1| Pumilio-family RNA binding repeat domain protein [Aspergillus
flavus NRRL3357]
gi|391874439|gb|EIT83321.1| translational repressor Pumilio/PUF3 [Aspergillus oryzae 3.042]
Length = 748
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 139/329 (42%), Gaps = 60/329 (18%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+Q S +LQ+KL G + ++ ++ + ++ N++ F+ + E +Q++ I
Sbjct: 386 DQQASIFLQQKLKVGTAEQKYEIIEAIAHQAYPLMINRFGNFLVQRCFEHGTPEQIVAIA 445
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKR-------------- 211
I + S+D FG I+K V + +V + L+R
Sbjct: 446 NAIKGNT---LSLSMDPFGCHVIQKAFDCVPEEHKAV-MVHELLRRIPETVIHRYACHVW 501
Query: 212 --LFRLLMMTKPGS--SVVLQCLEQIYHH---NNKNDFIYQAALEHCLYLACHEQGCINM 264
LF L +P + V + L ++H + Q E+C
Sbjct: 502 QKLFELRWSGEPPQIMAKVNEALRGMWHEVALGETGSLVVQNIFENC------------- 548
Query: 265 NNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYI 324
+++ K P +++L I + L+ GN+ +QH+ E P+ + +
Sbjct: 549 ---VEDEKRPAIEEVLTKIDL----LAHGQFGNWCIQHICEHGAPHDKNRAIEHILLWSV 601
Query: 325 DLSLTKCGSFVVQNCLKYRITVNYIVEEFLL-----NSDQ----IFRVACDKYGNYVIQT 375
D S+ + S +V+ CLK I + ++ +L +D+ + +A D+YGNY+IQ
Sbjct: 602 DYSMDQFASKIVEKCLK--IGGSEFLDRYLTRVCTGRTDRPRMPLIDIAGDQYGNYLIQW 659
Query: 376 ALIETMRPNSLHLHQRLVTKLQQNLDSLR 404
L+ +LH + + + +++++ SLR
Sbjct: 660 ILMNA----ALHQRELVASHIRKHMVSLR 684
>gi|238878269|gb|EEQ41907.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 965
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 149/312 (47%), Gaps = 39/312 (12%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSG-----DSRF--LDKVFNVVSEFTFQIICNQYARFVFG 150
S IL LA+D+ G ++LQ+K+ R + +FN + +++I + + ++
Sbjct: 285 SEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEIIFNQIYSHVYELIVDPFGNYLIQ 344
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K I CNE L + ++I Q LF Q S+++ G+ +++K++ ++ N L L++K LK
Sbjct: 345 KLIVYCNESN-LDLLMEIL-QYNLF-QISINQHGTRALQKIIDSL-NNSHQLGLLIKGLK 400
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ + L + + FIY + ++ +A H+ GC + ++
Sbjct: 401 PYIIELIKDLNGNHVIQKILNK--YEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNH 458
Query: 271 MK----GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
+ G + IL N L + GNYV+Q+++ + I F + ++++
Sbjct: 459 VTLQQLGEFSRAILKF--ENFKLLINDQFGNYVLQYLISINS----LDINFQIFQNFVNF 512
Query: 327 SLT-----KCGSFVVQNCLK-----YRITVNYIVEEF-----LLNSDQIFRVACDKYGNY 371
++ K S VV+ LK + V++ +F +L SD + + D YGNY
Sbjct: 513 GISNLCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSD-LNVLINDPYGNY 571
Query: 372 VIQTALIETMRP 383
VIQT + + P
Sbjct: 572 VIQTMIDIMVNP 583
>gi|295657032|ref|XP_002789091.1| pumilio-family RNA binding repeat protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226284989|gb|EEH40555.1| pumilio-family RNA binding repeat protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 744
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 138/318 (43%), Gaps = 28/318 (8%)
Query: 101 LLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
++ D+Q S +LQ+KL G S ++ + + ++ N++ F+ + E +Q
Sbjct: 371 IVCGNDQQASIFLQQKLKVGTSEQKFEIIEAIVNQAYPLMVNRFGNFLVQRCFEHGTPEQ 430
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
++ I + + S+D FG I+K V + +V + L+R+ ++
Sbjct: 431 IIAIANAVRGNT---LSLSMDPFGCHVIQKAFDCVPEEHKAV-MVHELLRRIPETVIHRY 486
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQA--ALEHCLY-LACHEQGCINMNNFIDEMKGPRRK 277
+ V Q L ++ N + + AL + +A E G + + N + ++
Sbjct: 487 --ACHVWQKLFELRWSNEPPQIMAKVNEALRGMWHEVALGETGSLVVQNIFENCVEDEKR 544
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
Q + + N LS GN+ +QH+ E P+ + D S+ + S VV+
Sbjct: 545 QAIEEVLSNVDLLSHGQFGNWCIQHICEHGAPHDKSRAIEHILLWATDYSMDQFASKVVE 604
Query: 338 NCLKYRITVNYIVEEFL-----LNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHL 388
CLK I + ++ +L D+ + +A D+YGNY+IQ L+
Sbjct: 605 KCLK--IGGSEFLDRYLNRVCTGRPDRPRMPLIDIAGDQYGNYLIQWILMNAAS------ 656
Query: 389 HQR--LVTKLQQNLDSLR 404
HQR + T +++++ SLR
Sbjct: 657 HQRDIVATHIRKHMVSLR 674
>gi|68467297|ref|XP_722310.1| hypothetical protein CaO19.12458 [Candida albicans SC5314]
gi|68467526|ref|XP_722196.1| hypothetical protein CaO19.4991 [Candida albicans SC5314]
gi|46444151|gb|EAL03428.1| hypothetical protein CaO19.4991 [Candida albicans SC5314]
gi|46444276|gb|EAL03552.1| hypothetical protein CaO19.12458 [Candida albicans SC5314]
Length = 938
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 149/312 (47%), Gaps = 39/312 (12%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSG-----DSRF--LDKVFNVVSEFTFQIICNQYARFVFG 150
S IL LA+D+ G ++LQ+K+ R + +FN + +++I + + ++
Sbjct: 284 SEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEIIFNQIYSHVYELIVDPFGNYLIQ 343
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K I CNE L + ++I Q LF Q S+++ G+ +++K++ ++ N L L++K LK
Sbjct: 344 KLIVYCNESN-LDLLMEIL-QYNLF-QISINQHGTRALQKIIDSL-NNSHQLGLLIKGLK 399
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ + L + + FIY + ++ +A H+ GC + ++
Sbjct: 400 PYIIELIKDLNGNHVIQKILNK--YEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNH 457
Query: 271 MK----GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
+ G + IL N L + GNYV+Q+++ + I F + ++++
Sbjct: 458 VTLQQLGEFSRAILKF--ENFKLLINDQFGNYVLQYLISINS----LDINFQIFQNFVNF 511
Query: 327 SLT-----KCGSFVVQNCLK-----YRITVNYIVEEF-----LLNSDQIFRVACDKYGNY 371
++ K S VV+ LK + V++ +F +L SD + + D YGNY
Sbjct: 512 GISNLCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSD-LNVLINDPYGNY 570
Query: 372 VIQTALIETMRP 383
VIQT + + P
Sbjct: 571 VIQTMIDIMVNP 582
>gi|452846127|gb|EME48060.1| hypothetical protein DOTSEDRAFT_69859 [Dothistroma septosporum
NZE10]
Length = 945
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 139/298 (46%), Gaps = 31/298 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I + D+ GS+++Q KL + +S D+VF + ++ + + +V KF E + D
Sbjct: 537 IAEFSGDQHGSRFIQTKLETANSDEKDRVFREIEPNAIPLMTDVFGNYVIQKFFE--HGD 594
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD---LVMKALKRLFRLL 216
+ L QDQ++ S +G ++K + V L++ ++ LK
Sbjct: 595 MSHKKILAKKMQDQVY-SLSKQMYGCRVVQKALDHV-----LVEQQQQLVAELKGHVLDC 648
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ + G+ V+ + +E+ H + FI +A + L+ H GC + +++ P++
Sbjct: 649 VKDQNGNHVIQKAIERC--HPSTIAFIIEAFVGQVPSLSIHAYGCRVIQRCLEKCDLPQK 706
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELED----PYLIETICFSLRGHYIDLSLTKCG 332
I+ + + ++ + GNYVVQHV+ ++ ++++ + +L G+ S K
Sbjct: 707 SMIMAELLQSIHTMISDQFGNYVVQHVVAHDEGECRSHVLDIVMNNLEGY----SKHKFA 762
Query: 333 SFVVQNCL-------KYRITVNYI--VEEFLLNSDQIFRVACDKYGNYVIQTALIETM 381
S VV+ CL ++ + V + + + I + D +GNYVIQ L++T+
Sbjct: 763 SNVVEKCLEKSDERWRHEVVVRLVNNSQRRIEGESPIVLMIKDNFGNYVIQK-LLDTL 819
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 260 GCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSL 319
GC + +D + +++Q++ + + ++ +GN+V+Q +E P I I +
Sbjct: 618 GCRVVQKALDHVLVEQQQQLVAELKGHVLDCVKDQNGNHVIQKAIERCHPSTIAFIIEAF 677
Query: 320 RGHYIDLSLTKCGSFVVQNCL-KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALI 378
G LS+ G V+Q CL K + ++ LL S I + D++GNYV+Q +
Sbjct: 678 VGQVPSLSIHAYGCRVIQRCLEKCDLPQKSMIMAELLQS--IHTMISDQFGNYVVQHVVA 735
Query: 379 ETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVY--NFIKDC 418
H+ ++ L+ GY KH + N ++ C
Sbjct: 736 HDEGECRSHVLDIVMNNLE--------GYSKHKFASNVVEKC 769
>gi|258571505|ref|XP_002544556.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904826|gb|EEP79227.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 773
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 138/313 (44%), Gaps = 28/313 (8%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+Q S +LQ+KL G S ++ + + ++ N++ F+ + E DQ++ I
Sbjct: 411 DQQASIFLQQKLKVGTSDQKYEIIEAIVNQAYPLMVNRFGNFLVQRCFEHGTADQVIAIA 470
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSV 225
I + S+D FG I+K V + +V + L+R+ ++ +
Sbjct: 471 NAIRGNT---LSLSMDPFGCHVIQKAFDCVPEEHKAV-MVHELLRRIPETVIHRY--ACH 524
Query: 226 VLQCLEQIYHHNNKNDFIYQA--ALEHCLY-LACHEQGCINMNNF----IDEMKGPRRKQ 278
V Q L ++ N + + AL + +A E G + + N +++ K P ++
Sbjct: 525 VWQKLFELRWSNEPPQIMAKVNEALRGMWHEVALGETGSLVVQNIFENCVEDEKRPAIEE 584
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+L I + L+ GN+ +QH+ E P+ + D S+ + S VV+
Sbjct: 585 VLAKIDL----LAHGQFGNWCIQHICEHGAPHDKSRAIEHILLWATDYSMDQFASKVVEK 640
Query: 339 CLKYRITV---NYIVEEFLLNSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHLHQR 391
CLK + +Y+ D+ + +A D+YGNY+IQ L+ + H +
Sbjct: 641 CLKIGGSEFLDHYLARVCTGRPDRPRMPLIDIAGDQYGNYLIQWILVNA----ATHQREL 696
Query: 392 LVTKLQQNLDSLR 404
+ + +++++ SLR
Sbjct: 697 VASHIRKHMVSLR 709
>gi|15489333|gb|AAH13765.1| Pum2 protein, partial [Mus musculus]
Length = 204
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 242 FIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQ 301
FI A L+ H GC + ++ + IL + + L ++ GNYV+Q
Sbjct: 6 FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQ 65
Query: 302 HVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLNSD- 358
HVLE P I +RG + LS K S VV+ C+ + R +++E +D
Sbjct: 66 HVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDG 125
Query: 359 ---QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHVYNF 414
++ + D+Y NYV+Q +I+ P + ++ K++ ++ +LR + YGKH+
Sbjct: 126 PHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IMHKIRPHITTLRKYTYGKHILAK 181
Query: 415 IKDCDLQN 422
++ L+N
Sbjct: 182 LEKYYLKN 189
>gi|9759249|dbj|BAB09773.1| unnamed protein product [Arabidopsis thaliana]
Length = 250
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 34/246 (13%)
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL 212
I + L+ + +TS F+ + +K GS +++KLM + +A+ RL
Sbjct: 11 ISVLDTGTLMWMASLMTSDCDYFMVITTNKNGSKTLQKLMGMSDDMDVFF---FEAIMRL 67
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
F +M K S V +Q + +K + +Y L + +LA + +
Sbjct: 68 FIHVMTDKYASYVTIQGMRVF--QQDKRELMYDQILRYACFLAGDQYALL---------- 115
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
LS + GN+VVQHVL+L D I L G+ ++LS K G
Sbjct: 116 -----------------LSNDAYGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYG 158
Query: 333 SFVVQNCLKY-RITVNYIVEEFLL-NSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
S++V+ L+ + + +V + L ++ + R+A +YGN+V+ AL T + L
Sbjct: 159 SYIVERLLEAGDVPMATVVLDLLACKTEMLIRLARSEYGNFVVCKALELTNEILTADLFY 218
Query: 391 RLVTKL 396
LV +L
Sbjct: 219 GLVNRL 224
>gi|406607837|emb|CCH40775.1| putative translational repressor [Wickerhamomyces ciferrii]
Length = 729
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 153/342 (44%), Gaps = 34/342 (9%)
Query: 59 RSTVPNLSGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQYLQEKLT 118
S++P + S PQ + N++ P + IL L+ D+ G ++LQ+KL
Sbjct: 233 HSSLPAVHFNSQPQTPKVEIPNYKNYDELNLIPIESL---DILKLSVDQYGCRFLQKKL- 288
Query: 119 SGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQA 178
D D +FN + +I N + ++ K I+ + Q + +I + LF+
Sbjct: 289 DLDVSIKDVIFNKIFNNLIDLIINPFGNYLIQKLIDYLSNYQKDLLIEKIHTY--LFL-I 345
Query: 179 SVDKFGSSSIRKLMKAVANRPPLLDLVMKALK-----------RLFRLLMMTKPGSSVVL 227
S++++G+ S++K++ V+N + DL++K L+ + +L+ G+ V+
Sbjct: 346 SINQYGTRSLQKIIDKVSNTYQI-DLIIKGLQINDVTNGIDDNNIVKLIKDLN-GNHVIQ 403
Query: 228 QCLEQIYHHNNKNDFIYQAAL--EHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISV 285
+C+ + K FI + + + ++ H+ GC + ++ + I ++ +
Sbjct: 404 KCIFKFPPE--KFQFIIDSICINNNIVRISTHKHGCCVLQKLLNNANFNQILNIAKMLLI 461
Query: 286 NAASLSRNFSGNYVVQHVLELE-------DPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
L + GNY++Q + EL +LI+ + + I LS K S VV+
Sbjct: 462 YLDDLINDQFGNYIIQFLFELNFLKTSKNISFLIDEFFNKIYNNLIQLSCLKFSSNVVEK 521
Query: 339 ---CLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
LK++ Y+ E L + DK+GNYVIQT +
Sbjct: 522 FIKILKFKQNYLYLTEIIKLVDYNFELLIKDKFGNYVIQTLI 563
>gi|195572367|ref|XP_002104167.1| GD20820 [Drosophila simulans]
gi|194200094|gb|EDX13670.1| GD20820 [Drosophila simulans]
Length = 701
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 7/251 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 457 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 516
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 517 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 571
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 572 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 629
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K + +N
Sbjct: 630 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFAQTLWRNA 689
Query: 340 LKYRITVNYIV 350
L + N +V
Sbjct: 690 LPMPLAENALV 700
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H L LA GC + ++ + ++++I++ + + ++ +GN+VVQ +E DP
Sbjct: 528 HVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDP 587
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVEEFLLNSDQIFRVACDK 367
++ I + +G LS G V+Q L++ I++E +++Q+ + D+
Sbjct: 588 VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ---DQ 644
Query: 368 YGNYVIQTAL 377
YGNYVIQ L
Sbjct: 645 YGNYVIQHVL 654
>gi|119173521|ref|XP_001239193.1| hypothetical protein CIMG_10215 [Coccidioides immitis RS]
Length = 829
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 132/294 (44%), Gaps = 33/294 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 441 IVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKLFEHGNQA 500
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ V LLD +K L ++
Sbjct: 501 QKKALAQQMMGH---ILNLSTQMYGCRVVQKALEHV-----LLDQQAAMVKELENQVIKC 552
Query: 219 --TKPGSSVVLQCLEQIYHHNNK---NDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
+ G+ V+ + +E++ + + NDF Q A H GC + ++
Sbjct: 553 VKDQNGNHVIQKAIERVPQAHIQFIINDFSGQ-----IQRWAVHSYGCRVIQRMLEHCNE 607
Query: 274 PRRKQILYLISVNAASLSRNFSGNYVVQHVLE----LEDPYLIETICFSLRGHYIDLSLT 329
R IL + + +ASL + GNYV+QHV+E + +I + L + S
Sbjct: 608 ADRDAILGELHLCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQL----VLFSKH 663
Query: 330 KCGSFVVQNCLKYRITVNY--IVEEFLLNSDQ----IFRVACDKYGNYVIQTAL 377
K S VV+ L++ + I+ F +++ + + D++GNYVIQ L
Sbjct: 664 KFASNVVEKTLEFGRPNDRSEILRIFTTPNERGESPLEGLMKDQFGNYVIQKVL 717
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 234 YHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLS 291
+ NNK + Y+ H + + + G + ++ ++++ I NA L
Sbjct: 422 FRANNKGNKRYELKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLM 481
Query: 292 RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYI 349
+ GNYV+Q + E + + + + GH ++LS G VVQ L++ + +
Sbjct: 482 MDVFGNYVIQKLFEHGNQAQKKALAQQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAM 541
Query: 350 VEEFLLNSDQIFRVACDKYGNYVIQTAL 377
V+E +Q+ + D+ GN+VIQ A+
Sbjct: 542 VKEL---ENQVIKCVKDQNGNHVIQKAI 566
>gi|393245475|gb|EJD52985.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 503
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 133/286 (46%), Gaps = 17/286 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFN-VVSEFTFQIICNQYARFVFGKFIETCNE 158
I+ + D+ GS+++Q+KL S S VF+ +V E Q+I + + +V K E
Sbjct: 42 IVEFSGDQHGSRFIQQKLESATSEEKQIVFDEIVPESALQLIQDVFGNYVIQKLFEYGT- 100
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
Q+ + L T ++ + +Q S+ +G ++K ++ + P +K L+ ++M
Sbjct: 101 -QVQKTALANTMENHI-LQLSLQMYGCRVVQKAIEYIL--PEQQASFVKELEAHVLKIVM 156
Query: 219 TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLY-LACHEQGCINMNNFIDEMKGPRRK 277
G+ V+ + +E++ + F++ + +Y L+ H GC + + + + +
Sbjct: 157 DANGNHVIQKLIERVS--PERLGFVH--SFRGSVYELSTHPFGCRVLQRCFEYLTDDQTR 212
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
+L + ++L ++ GNYVVQ VLE P I LRG + ++ K S V +
Sbjct: 213 PLLDELHKYTSNLMQDQFGNYVVQFVLEHGKPEDRLLIISRLRGQMLHMAKHKFASNVCE 272
Query: 338 NCL------KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
L R+ ++ I+ + + D++ NYV+Q AL
Sbjct: 273 KALITADEENQRLLIDEIMTPRADGFSPVVTMMKDQFANYVLQRAL 318
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 277 KQILY--LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
KQI++ ++ +A L ++ GNYV+Q + E + ++ H + LSL G
Sbjct: 67 KQIVFDEIVPESALQLIQDVFGNYVIQKLFEYGTQVQKTALANTMENHILQLSLQMYGCR 126
Query: 335 VVQNCLKYRITVNY--IVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
VVQ ++Y + V+E + ++ D GN+VIQ LIE + P L
Sbjct: 127 VVQKAIEYILPEQQASFVKEL---EAHVLKIVMDANGNHVIQK-LIERVSPERL 176
>gi|357153506|ref|XP_003576473.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like
[Brachypodium distachyon]
Length = 445
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 145/343 (42%), Gaps = 32/343 (9%)
Query: 66 SGTSNPQ--YETITSSNFQTPLGFQANPFQHCA-----NSGILLLAQDEQGSQYLQEKLT 118
+G+ P + + +S + TP A P + A + I+ LA++EQ + + L
Sbjct: 96 AGSVRPHAAWPSFSSDAYMTPP--WAWPGRSAAINTQLDDYIVYLAKNEQ---MVLDTLF 150
Query: 119 SGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQA 178
SG V +++ + ++ + + + + CN I +IT
Sbjct: 151 SGSPVDAQIVADLIVRYAVHLLESSHGNRLLDLVLNHCNHSLHGLIVARITR-------- 202
Query: 179 SVDKFGSSSIRKLMKA---VANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYH 235
DK S + +++++ V + L + +M + ++T V+Q Q
Sbjct: 203 --DKNRSDEVARVIRSCRSVKSLQLLRNAIMPWIAPSMMHQLVTDSNRLRVVQAFVQCVP 260
Query: 236 HNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFS 295
FI+ A ++CL LA G + + ++ + + +L IS + L++N
Sbjct: 261 DPYFAKFIFDAIAKNCLALAYGSHGVSLLRSCLEHAEWTEKDDVLSKISCWSIELAQNRF 320
Query: 296 GNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVN--YIVEEF 353
GNY+VQ VL+ +P + I R +Y+ LS + S VV+ CL+ + +I++E
Sbjct: 321 GNYIVQDVLKQRNPSHLAIIASCFRNNYVLLSKQRYSSNVVETCLQVFVDAERFFIIDE- 379
Query: 354 LLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
L+ + ++ NYVI AL P L RL T +
Sbjct: 380 LIWCPHFKDLVTHEFANYVISRALGTCTFP----LQHRLATAI 418
>gi|341899697|gb|EGT55632.1| CBN-PUF-8 protein [Caenorhabditis brenneri]
Length = 531
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 146/339 (43%), Gaps = 51/339 (15%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN 157
+L A+D+ GS+++Q+KL D + D +F+ V +++ + + +V KF E
Sbjct: 198 GNLLKFAKDQVGSRFIQQKLEYCDKKEKDSIFDEVVANAAELVDDIFGNYVVQKFFEYGE 257
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAV--ANRPPLLDLVMKALKRLFRL 215
E ++ D + + F + R L KA+ N P + ++ K ++R
Sbjct: 258 EKHWAKLV------DAVVERVPEYAFQMYACRVLQKALEKVNEPLQIKILNKVRHVIYR- 310
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEH---CLYLACHEQGCINMNNFIDEMK 272
M + G+ VV + +E++ FI L++ ++ GC + ++
Sbjct: 311 CMKDQNGNHVVQKAIEKV--GPEYIQFIVDTLLKNHKTVFDMSVDPYGCRVVQRCLEHCI 368
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLEL---EDP-YLIETICFSLRGHYIDLSL 328
+ + I+ I ++ N GNYVVQHV++ ED ++I+ + L + +
Sbjct: 369 PKQTRPIIERILERFDEVTNNQYGNYVVQHVIQHGTDEDRMFIIKRVAEKL----FEFAT 424
Query: 329 TKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVAC---------------DKYGNYVI 373
K S V++ CL+ E + + + I R AC D+Y NYV+
Sbjct: 425 HKYSSNVIEKCLE---------EGTVYHKNMIVRSACNQPEGNMPVVVQMMKDQYANYVV 475
Query: 374 QTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
Q + + + L+ ++ ++ LR F +GKH+
Sbjct: 476 QKMFDQV----TTDQRRELIQTVRPHIPVLRQFPHGKHI 510
>gi|156523285|ref|NP_001096040.1| pumilio homolog 2 [Danio rerio]
gi|154354086|gb|ABS76148.1| pum-like protein [Danio rerio]
Length = 1106
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 113/258 (43%), Gaps = 35/258 (13%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ +QD+ GS+++Q+KL S VF + + +Q++ + + +V KF E + D
Sbjct: 847 MVEFSQDQHGSRFIQQKLERATSAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 906
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ +++ L +
Sbjct: 907 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKD 963
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ ++Q
Sbjct: 964 QNGNHVVRKCIECV--QPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCT---QEQT 1018
Query: 280 LYLI---------------------------SVNAASLSRNFSGNYVVQHVLELEDPYLI 312
L ++ +V++ +L ++ GNYV+QHVLE P
Sbjct: 1019 LPILEELHQHSEQLGQKYQGVSLEMTPKTYYTVSSDALFKDQYGNYVIQHVLEHGRPEDK 1078
Query: 313 ETICFSLRGHYIDLSLTK 330
I +RG + LS K
Sbjct: 1079 SKIVAEVRGKVLALSQHK 1096
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ R+ + I A L + GNYV+Q E
Sbjct: 846 HMVEFSQDQHGSRFIQQKLERATSAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSA 905
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSD-QIFRVACDKY 368
+ +RGH + L+L G V+Q L+ + ++ + + D + + D+
Sbjct: 906 DQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQN 965
Query: 369 GNYVIQTALIETMRPNSLHL 388
GN+V++ IE ++P +L
Sbjct: 966 GNHVVRK-CIECVQPQALQF 984
>gi|344302253|gb|EGW32558.1| hypothetical protein SPAPADRAFT_67158 [Spathaspora passalidarum
NRRL Y-27907]
Length = 926
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 147/325 (45%), Gaps = 42/325 (12%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSG-------DSRFLDKVFNVVSEFTFQIICNQYARFVFG 150
S IL L++D+ G ++LQ+K+ + +F + + + +I + + ++
Sbjct: 220 SEILKLSKDQYGCRFLQKKIDENLIPNYQVRHANFEIIFKQIYPYMYDLIIDPFGNYLIQ 279
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K I CNE L + L+I Q+ LF Q S+ + G+ +++K++ + N L+L++K LK
Sbjct: 280 KLIIYCNEANL-NLLLEIL-QENLF-QISISQHGTRALQKIIDNLNNSY-QLELLIKGLK 335
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ + L + + + FIY + ++ +A H+ GC + ++
Sbjct: 336 PYIIDLIKDLNGNHVIQKILNKYQPQDCQ--FIYDSIIDDLYIVATHKHGCCVLQKCLNH 393
Query: 271 MKGPRRKQILYLISV--NAASLSRNFSGNYVVQHVLELED------------PYLIETIC 316
+ + +Q I N L + GNYV+Q+++ + + I +C
Sbjct: 394 VTPAQLQQFSAAILRFDNFKLLINDQFGNYVLQYLISINSFEMNYKIFENFVQFNIGNLC 453
Query: 317 -FSLRGHYIDLSLTKCGSFVVQNC----LKYRITVNYIVEEFLLNSDQIFRVACDKYGNY 371
+ ++ L C + + LK+ + N ++ + + ++ D YGNY
Sbjct: 454 NLKFSSNVVEKFLKNCFNNETMDMSFSNLKFELIYNILIND-------LNKLINDPYGNY 506
Query: 372 VIQTALIETMRPNSLHLHQRLVTKL 396
VIQT + + P H+ V KL
Sbjct: 507 VIQTLIDILINP---HVDNNQVEKL 528
>gi|392869402|gb|EJB11747.1| mRNA binding protein Pumilio 2 [Coccidioides immitis RS]
Length = 886
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 132/294 (44%), Gaps = 33/294 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 498 IVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKLFEHGNQA 557
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ V LLD +K L ++
Sbjct: 558 QKKALAQQMMGH---ILNLSTQMYGCRVVQKALEHV-----LLDQQAAMVKELENQVIKC 609
Query: 219 --TKPGSSVVLQCLEQIYHHNNK---NDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
+ G+ V+ + +E++ + + NDF Q A H GC + ++
Sbjct: 610 VKDQNGNHVIQKAIERVPQAHIQFIINDFSGQ-----IQRWAVHSYGCRVIQRMLEHCNE 664
Query: 274 PRRKQILYLISVNAASLSRNFSGNYVVQHVLE----LEDPYLIETICFSLRGHYIDLSLT 329
R IL + + +ASL + GNYV+QHV+E + +I + L + S
Sbjct: 665 ADRDAILGELHLCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQL----VLFSKH 720
Query: 330 KCGSFVVQNCLKYRITVNY--IVEEFLLNSDQ----IFRVACDKYGNYVIQTAL 377
K S VV+ L++ + I+ F +++ + + D++GNYVIQ L
Sbjct: 721 KFASNVVEKTLEFGRPNDRSEILRIFTTPNERGESPLEGLMKDQFGNYVIQKVL 774
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 234 YHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLS 291
+ NNK + Y+ H + + + G + ++ ++++ I NA L
Sbjct: 479 FRANNKGNKRYELKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLM 538
Query: 292 RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRI--TVNYI 349
+ GNYV+Q + E + + + + GH ++LS G VVQ L++ + +
Sbjct: 539 MDVFGNYVIQKLFEHGNQAQKKALAQQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAM 598
Query: 350 VEEFLLNSDQIFRVACDKYGNYVIQTAL 377
V+E +Q+ + D+ GN+VIQ A+
Sbjct: 599 VKEL---ENQVIKCVKDQNGNHVIQKAI 623
>gi|35186944|gb|AAQ84134.1| pumilio protein 5 [Trypanosoma cruzi]
Length = 418
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 172 DQLFVQ---ASVDKFGSSSIRKLMKAVANRPPLLDLVMK--ALKRLFRLLMMTKPGSSVV 226
D+L Q ++D+ G +R L++ ++ LL+ ++ A K + L + ++ VV
Sbjct: 150 DELLPQLNIVALDQQGCHVVRALIELISTE--LLETILPHFAPKTIIELAVSSQHTRRVV 207
Query: 227 LQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVN 286
E+ H + I + LA +QGCI + I+ +R+ ++ ++
Sbjct: 208 QSIFER--HKSEALTPIVTTIAQSGQQLAVSQQGCIAVIRTIENSLPHQRRSVISMLLPV 265
Query: 287 AASLSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--R 343
SL+ N GNYVVQ +L+ ++ L+ +C + GH++ LS K S V++ +
Sbjct: 266 LPSLTMNCYGNYVVQCLLQHMDHASLVSVVCHNFAGHWLTLSCNKFASNVIEKVVWQLDG 325
Query: 344 ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIET 380
+ +V+E ++++ + + D +GN+V+Q A+I++
Sbjct: 326 VARKEVVDELVMDASNLRCLMQDGFGNFVLQ-AIIDS 361
>gi|349605218|gb|AEQ00529.1| Pumilio-like protein 1-like protein, partial [Equus caballus]
Length = 281
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 113/240 (47%), Gaps = 13/240 (5%)
Query: 179 SVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNN 238
++ +G I+K ++ + +++ +++ L + + G+ VV +C+E +
Sbjct: 22 ALQMYGCRVIQKALEFIPADQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECV--QPQ 79
Query: 239 KNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNY 298
FI A L+ H GC + ++ + IL + + L ++ GNY
Sbjct: 80 SLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY 139
Query: 299 VVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--RITVNYIVEEFLLN 356
V+QHVLE P I +RG+ + LS K S VV+ C+ + R +++E
Sbjct: 140 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 199
Query: 357 SD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLR-FGYGKHV 411
+D ++ + D+Y NYV+Q +I+ P + ++ K++ ++ +LR + YGKH+
Sbjct: 200 NDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VMHKIRPHIATLRKYTYGKHI 255
>gi|70984262|ref|XP_747647.1| mRNA binding protein Pumilio 2 [Aspergillus fumigatus Af293]
gi|66845274|gb|EAL85609.1| mRNA binding protein Pumilio 2, putative [Aspergillus fumigatus
Af293]
gi|159122433|gb|EDP47554.1| mRNA binding protein Pumilio 2, putative [Aspergillus fumigatus
A1163]
Length = 908
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 141/332 (42%), Gaps = 44/332 (13%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 496 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQS 555
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ + S +G ++K ++ + L D +K L ++
Sbjct: 556 QKKILANQMKGH---VLALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKC 607
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + FI A LA H GC + ++ + R
Sbjct: 608 VRDQNGNHVIQKAIERVP--SQYVQFIINAFKGQVSRLAAHPYGCRVIQRMLEHCEEVDR 665
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ IL + A L + GNYV+QHV+E + + + + S K S VV
Sbjct: 666 ESILAELHACTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLSQLLMYSKHKFASNVV 725
Query: 337 QNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQT-----------ALIE 379
+ +++ + ++ + + + D+YGNYVIQ LI+
Sbjct: 726 EKSIEFGEESQRQQIISTLTSANERGESPLLGLMRDQYGNYVIQKVLGQLKGEEREGLID 785
Query: 380 TMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHV 411
+RP L+++L+ +F YGK +
Sbjct: 786 QIRP--------LLSQLK------KFSYGKQI 803
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 225 VVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
VV L + + N+K + Y+ H + + + G + ++ ++Q+
Sbjct: 468 VVRSPLLEEFRANSKGNKRYELKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKEQVFRE 527
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I N L + GNYVVQ + E + + + ++GH + LS G VVQ L++
Sbjct: 528 IQPNCLQLMTDVFGNYVVQKLFEHGNQSQKKILANQMKGHVLALSTQMYGCRVVQKALEH 587
Query: 343 RITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
+T +V+E + + + D+ GN+VIQ A+
Sbjct: 588 ILTDQQASMVKEL---ENHVLKCVRDQNGNHVIQKAI 621
>gi|410077699|ref|XP_003956431.1| hypothetical protein KAFR_0C03030 [Kazachstania africana CBS 2517]
gi|372463015|emb|CCF57296.1| hypothetical protein KAFR_0C03030 [Kazachstania africana CBS 2517]
Length = 703
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 49/315 (15%)
Query: 103 LAQDEQGSQYLQEKLTSG---DSRFL-DKVFNVVSEFTFQIICNQYARFVFGKFIETCNE 158
LA D+ G ++LQ+KL S +S + D ++ + F ++ + + ++ K E
Sbjct: 135 LATDQFGCRFLQKKLESNSITESNLVRDLMYEQIKPFFLNLVLDPFGNYLIQKLCEYLTT 194
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR---- 214
D+ T I S + S++++G+ S++K++ V N + DL++K + F
Sbjct: 195 DEK---TFLINSIYPHVFRISINQYGTRSLQKIIDTVDNETQI-DLIVKGFSQEFTSIDQ 250
Query: 215 --LLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALE--HCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ +C+ + ++K DFI A +E + + ++ H+ GC + +
Sbjct: 251 VVTLINDLNGNHVIQKCIFKF--PSSKFDFIINAIIEKNNIIAISTHKHGCCVLQKLLSV 308
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLS 327
+ +I I + L + GNY++Q +L EL+ +LIE L LS
Sbjct: 309 CTLQQIFKISLKIIQFLSGLMNDQFGNYIIQFLLDIKELDFYFLIEIFNTLLVNDICQLS 368
Query: 328 LTKCGSFVVQNCLK--YRI---TVN--------------------YIVEEFLLNSDQIFR 362
K S V++ +K +RI T+N I+E F +N + + R
Sbjct: 369 CLKFSSNVIEKYIKKLFRIIQDTINGNILPNMNDDIINNLMRIILNIIEFFTINLNILIR 428
Query: 363 VACDKYGNYVIQTAL 377
D YGNY +QT L
Sbjct: 429 ---DNYGNYALQTLL 440
>gi|58263134|ref|XP_568977.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58263136|ref|XP_568978.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58263138|ref|XP_568979.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223627|gb|AAW41670.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223628|gb|AAW41671.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223629|gb|AAW41672.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 673
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 124/295 (42%), Gaps = 38/295 (12%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ A D+ GS+++Q+KL + K+F+ + +Q++ + + +V K E + D
Sbjct: 298 IVEFAGDQHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVTQKMFE--HGD 355
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANR----------PPLLDLVMKA- 208
QL + L D +Q S+ +G ++K + + N P +L+ V +
Sbjct: 356 QLQKAAL-AKKMDGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECVKSSN 414
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ + ++ T P S+ + FI H LA H GC +
Sbjct: 415 ANHVVQRIINTGPPQSI-------------PDSFI-----GHVEELAKHPYGCRVLQKTF 456
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
+ + ++ +L + L+ + GNYV+Q V+ + P + L+G +
Sbjct: 457 ENLDDKMKRSLLDEMHKCVIPLTEDQFGNYVIQSVITVGKPEDRNKVISQLKGRVTTFAR 516
Query: 329 TKCGSFVVQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
K S VV+ L + R+ ++ ++ ++Q+ + D Y N+ +QT +
Sbjct: 517 HKFASNVVEKALIHADPADRRVLIDELIGMQPDGTNQVGMLLRDAYANFPLQTGM 571
>gi|343413307|emb|CCD21355.1| pumillio RNA binding protein 4, putative [Trypanosoma vivax Y486]
Length = 1027
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 36/291 (12%)
Query: 60 STVPNLSGTSNPQYETITSSNFQTPLGFQ--ANPFQHCA-------NSGILLLAQDEQGS 110
S++PN SG+ + ++T SN P + +Q CA NS ++ + D+ G
Sbjct: 458 SSIPNNSGS----FHSLTLSNAHLPGNVENVGVVYQPCAPQQLLLTNSSVVKMVNDQAGC 513
Query: 111 QYLQEKLTSGDSRFLDKVFNVVSEFTF---QIICNQYARFVFGKFIETCNEDQLLRITLQ 167
+ LQ L + +V +++E ++ NQY F+ K +E + + L +
Sbjct: 514 RDLQFVLEHFPFHSV-QVQGIIAELLPVLPHVMMNQYGNFLVQKLLEIAPDAERLNMLED 572
Query: 168 ITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVL 227
S + +V G+ +++KL+ ++ ++ +V AL+R RLLMM GS VVL
Sbjct: 573 YLSSS--LCEIAVSPHGNYAVQKLIDSLRSQHET-KVVCDALRRKARLLMMDPKGSHVVL 629
Query: 228 ---QCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
QC++Q F+Y +E + L +QGC + +D + ++ I
Sbjct: 630 KLLQCVQQ-----KDVVFLYDLIVEQTVILCNDKQGCCVVQKCMDHASPDQLLRLQQAIL 684
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
N L+ + GNYVV H LI + S + H +D + + G +
Sbjct: 685 KNIIPLAMDPFGNYVVTH--------LISSCNSSGQCHVVDEAALRVGHVI 727
>gi|71655238|ref|XP_816225.1| pumilio/PUF RNA binding protein 5 [Trypanosoma cruzi strain CL
Brener]
gi|70881337|gb|EAN94374.1| pumilio/PUF RNA binding protein 5, putative [Trypanosoma cruzi]
Length = 418
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 172 DQLFVQ---ASVDKFGSSSIRKLMKAVANRPPLLDLVMK--ALKRLFRLLMMTKPGSSVV 226
D+L Q ++D+ G +R L++ ++ LL+ ++ A K + L + ++ VV
Sbjct: 150 DELLPQLNIVALDQQGCHVVRALIELISTE--LLETILPHFAPKTIIELAVSSQHTRRVV 207
Query: 227 LQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVN 286
E+ H + I + LA +QGCI + I+ +R+ ++ ++
Sbjct: 208 QSIFER--HKSEALTPIVTTIAQSGQQLAVSQQGCIAVIRTIENSLPHQRRSVISMLLPV 265
Query: 287 AASLSRNFSGNYVVQHVLE-LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY--R 343
SL+ N GNYVVQ +L+ ++ L+ +C + GH++ LS K S V++ +
Sbjct: 266 LPSLTMNCYGNYVVQCLLQHMDHASLVSVVCHNFAGHWLTLSCNKFASNVIEKVVWQLDG 325
Query: 344 ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIET 380
+ +V+E ++++ + + D +GN+V+Q A+I++
Sbjct: 326 VARKEVVDELVMDASNLRCLMQDGFGNFVLQ-AIIDS 361
>gi|115386338|ref|XP_001209710.1| hypothetical protein ATEG_07024 [Aspergillus terreus NIH2624]
gi|114190708|gb|EAU32408.1| hypothetical protein ATEG_07024 [Aspergillus terreus NIH2624]
Length = 882
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 139/313 (44%), Gaps = 42/313 (13%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + +S ++VF + Q++ + + +V K E N+
Sbjct: 491 VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIKGDCLQLMTDVFGNYVVQKLFEHGNQT 550
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+ V S+ +G ++K ++ + L D +K L ++
Sbjct: 551 QKKVLANQMKGH---IVMLSLQMYGCRVVQKALEHI-----LTDQQAAMVKELEGHVIKC 602
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E++ + + FI LA H GC + ++ K R
Sbjct: 603 VRDQNGNHVIQKAIERVPSEHIQ--FIMNDFRGSVDKLAAHPYGCRVIQRMLEHCKEEDR 660
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVL---ELEDPYLIETICFSLRGHYIDLSLTKCGS 333
+ IL + A L + GNYV+QHV+ + +D + T+ S + ++ S K S
Sbjct: 661 ESILGELHSCTAKLIPDQFGNYVIQHVITNGQEKDRTRMITVVMS---NLLNFSKHKFAS 717
Query: 334 FVVQNCLKY------RITVNYIV----EEFLL----------NSDQIF---RVACDKYGN 370
VV+ +++ + V +V E+F L N +++ V D+YGN
Sbjct: 718 NVVEKSIEFGTLSQREVIVRTLVFPHDEDFTLLEGSKKPVDINDERLKPLEGVIRDQYGN 777
Query: 371 YVIQTALIETMRP 383
YVIQ L + P
Sbjct: 778 YVIQKILNMILEP 790
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAA--LEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
+S+V + + + NNK ++ H + + + G + ++ ++Q+
Sbjct: 461 TSIVRSPVLEEFRANNKGPKRHELKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKEQVF 520
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
I + L + GNYVVQ + E + + + ++GH + LSL G VVQ L
Sbjct: 521 REIKGDCLQLMTDVFGNYVVQKLFEHGNQTQKKVLANQMKGHIVMLSLQMYGCRVVQKAL 580
Query: 341 KYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ +T +V+E + + D+ GN+VIQ A+
Sbjct: 581 EHILTDQQAAMVKEL---EGHVIKCVRDQNGNHVIQKAI 616
>gi|145483393|ref|XP_001427719.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394802|emb|CAK60321.1| unnamed protein product [Paramecium tetraurelia]
Length = 469
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 123/270 (45%), Gaps = 11/270 (4%)
Query: 113 LQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQD 172
LQ L D +FN V + + + + + K E +DQ R+ + +Q
Sbjct: 168 LQNILDGNDINAKRVIFNQVEKICLKASKDMFGNYTVQKIFEVGTQDQKQRMYNLLINQ- 226
Query: 173 QLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQ 232
S +++ ++K+M+ + + L+D+ ++ + L+ G+ V+L C E
Sbjct: 227 --IFDLSKNQYACRVVQKMMEFIKDHTQLVDIFLQIMYPQINQLLNDSNGNYVILSCFEL 284
Query: 233 IYHHNNKNDFIYQAA-LEHCL-YLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASL 290
NKN I+ +E L +++ GC + ++ + ++IL ++ A+ L
Sbjct: 285 F----NKNQLIFMIPYIEDSLQFMSKQTYGCRVIQKVLELYPIEQTQRILDILMTLASQL 340
Query: 291 SRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIV 350
GNY++Q++L+ P + IC ++ ++ LS+ K GS V+ + I
Sbjct: 341 CYQEFGNYIIQYLLKSGPPKEKQIICSIIKDNFEQLSINKFGSNTVEKYIDIMGPNQIIT 400
Query: 351 EEFLLNSDQ--IFRVACDKYGNYVIQTALI 378
+++DQ + ++ + +GNYV++ LI
Sbjct: 401 ILCSISNDQFVFYNLSINPFGNYVMKKVLI 430
>gi|440301750|gb|ELP94136.1| meiotic coiled-coil protein, putative [Entamoeba invadens IP1]
Length = 443
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 170/388 (43%), Gaps = 39/388 (10%)
Query: 44 PLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTPLGFQ-----ANPFQH---- 94
P P+ V S P+ + S P+ + I SS P ++ +NP Q
Sbjct: 71 PFIPKKRHVVGLASPSCISPSFNSMS-PRVKQIVSS----PPTYKHANSSSNPNQMRNTI 125
Query: 95 CANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE 154
N + L +++QGS+ +Q L + + ++F+ + F ++ + + +V KFIE
Sbjct: 126 NNNYTVADLCKEQQGSRRIQAFLQTAKEYEVTEIFDSLKGDLFDLMLDLFGNYVVQKFIE 185
Query: 155 TCNED--QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL 212
E Q +R ++ + S +G I+K+++ ++ + + + ++
Sbjct: 186 VGVEKHRQYVRDLVKCK-----IIMLSKHMYGCRVIQKIVEYSSSEQQ--EELFQKIEGE 238
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
R L++ + G+ VV + +E+ + I + +E ++ H GC + I++
Sbjct: 239 VRDLIVDQNGNHVVQKFVEKYDGCGGRVIDIIKDDIE---LISSHGFGCRVIQRLIEKSD 295
Query: 273 GPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
I + N LS N GNYV+QH+LE + + I ++ + + SL K
Sbjct: 296 TTINTIIYNKVRGNIQVLSMNQFGNYVIQHLLEFGSQPIRDEIISEVQDIFCESSLMKFS 355
Query: 333 SFVVQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
S V++ C+++ R+ + + F N+D + + + + NYV+Q L + +
Sbjct: 356 SNVMEKCVQFGSSEKQRVLIGKV---FSCNADSVVSMMKNPFANYVLQRMLTVMNKDDRT 412
Query: 387 HLHQRLVTKLQQNLDSLRFG-YGKHVYN 413
+ + Q+N+ LR Y KH+ N
Sbjct: 413 KFNANFI---QKNVVMLRKNVYAKHLLN 437
>gi|19113974|ref|NP_593062.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|1351595|sp|Q09829.1|YAD3_SCHPO RecName: Full=Pumilio domain-containing protein C4G8.03c
gi|1022348|emb|CAA91204.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 780
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 127/277 (45%), Gaps = 9/277 (3%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+ +D+ G +YLQ+ L F + + Q++ + + ++ K + +Q L
Sbjct: 470 ICKDQYGCRYLQKLLDENPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVYASREQKL 529
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+ I + V + +G+ S++ ++ + + + L++K + L G
Sbjct: 530 SMLNGI---GEGIVDICSNLYGTRSMQNIIDKLTSNEQI-SLLLKIIIPSLTTLACDNNG 585
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+ + K + ++ + E+ + LA + GC + +D G +++++
Sbjct: 586 THVLQKCIAKFPPE--KLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGDIQERLVNS 643
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I + L +N GNY+VQHVLEL E I G+ LSL K S ++ C++
Sbjct: 644 IIKSCLLLVQNAYGNYLVQHVLELNIQPYTERIIEKFFGNICKLSLQKFSSNAIEQCIRT 703
Query: 343 R--ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
T +++EF L+ I ++ D Y NYV+Q L
Sbjct: 704 ASPSTREQMLQEF-LSFPNIEQLLDDCYANYVMQRFL 739
>gi|223995911|ref|XP_002287629.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976745|gb|EED95072.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 306
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 128/287 (44%), Gaps = 20/287 (6%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+ GS+++Q++L D+ V + V ++ + + +V K E N++ +
Sbjct: 12 DQNGSRFIQQRLEVADAAEKRAVMSEVIPNMSELQNDVFGNYVVQKLFEFGNDEMKADLK 71
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSV 225
+T+ + S+ +G I+K ++++ + L +L +K K+ + + + G+ V
Sbjct: 72 GALTNN---MISLSLQMYGCRVIQKALESL-DYEVLCEL-LKEFKQSVLMCIQDQNGNHV 126
Query: 226 VLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISV 285
+ +C+E + + +FI L + L CH GC + ++ ++ L I +
Sbjct: 127 MQKCIEVMSIKAKEAEFIVDDVLANVETLCCHPYGCRVLQRMLEHCVEFQKTATLDEIQL 186
Query: 286 NAASLSRNFSGNYVVQHVLEL-EDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY-- 342
+L + GNYV+QHVL+ D + + + LS K S VV+ LKY
Sbjct: 187 VHKTLLDDQYGNYVIQHVLQYGRDSDRDSLLKIIVENDLLKLSRQKFASNVVEKLLKYGN 246
Query: 343 RITVNYIVEEFL------------LNSDQIFRVACDKYGNYVIQTAL 377
N IV E L + S + + D Y NYV+QTA+
Sbjct: 247 ARQRNAIVREMLQVVNESGTSQEGVGSTVLLLMVRDAYANYVVQTAI 293
>gi|328849409|gb|EGF98590.1| hypothetical protein MELLADRAFT_40771 [Melampsora larici-populina
98AG31]
Length = 370
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 140/321 (43%), Gaps = 20/321 (6%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ A D+ GS+++Q KL + + + VFN + Q+ + +A +V KF E N+
Sbjct: 57 IVEFAGDQLGSRHIQSKLDTATTEEKEIVFNEIYPNVLQLSMDVFANYVVQKFFEQGNQA 116
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLD---LVMKALKRLFRLL 216
Q ++ + +Q S+ +G I+K ++ V L+D ++K L+
Sbjct: 117 QKTQLAESLRGH---VLQLSLQMYGCRVIQKALEFV-----LVDQQHAIIKELEGEVIQC 168
Query: 217 MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ + V+ + LE+I N FI QA + LA H GC + + M +
Sbjct: 169 AKDQNANHVLQRSLERI--DPKMNRFISQAFVGQAFALATHPYGCRVLQRVFEHMPEDQT 226
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+ +L + + +L + GNYV Q ++ + ++G + +S K S VV
Sbjct: 227 RGLLEELHRFSNNLMTDQYGNYVAQWIITDGKKEDAAAMMAKVKGQVLLMSKHKFASNVV 286
Query: 337 QNCL--KYRITVNYIVEEFLL-NSDQIFRVAC---DKYGNYVIQTALIETMRPNSLHLHQ 390
+ + ++ ++EE L +D V D + N+ +Q L + P L +
Sbjct: 287 EKAILKSTEEEMHQMIEEILAPRADGTSTVGVMLKDAFANFPLQKFLQASKEPQRALLFE 346
Query: 391 RLVTKLQQNLDSLRFGYGKHV 411
+ ++L ++ YGK++
Sbjct: 347 EVASQL-NHMKKYSLSYGKYL 366
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + A + G ++ + +D ++ + I N LS + NYVVQ E +
Sbjct: 56 HIVEFAGDQLGSRHIQSKLDTATTEEKEIVFNEIYPNVLQLSMDVFANYVVQKFFEQGNQ 115
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVEEFLLNSDQIFRVACDK 367
+ SLRGH + LSL G V+Q L++ + + I++E ++ + A D+
Sbjct: 116 AQKTQLAESLRGHVLQLSLQMYGCRVIQKALEFVLVDQQHAIIKEL---EGEVIQCAKDQ 172
Query: 368 YGNYVIQTAL 377
N+V+Q +L
Sbjct: 173 NANHVLQRSL 182
>gi|327356555|gb|EGE85412.1| pumilio RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 858
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 141/320 (44%), Gaps = 32/320 (10%)
Query: 101 LLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
++ + D+Q S +LQ+KL G + ++ + + ++ N++ F+ + E +Q
Sbjct: 491 IVCSNDQQASIFLQQKLKVGTAEQKYEIIEAIVNQAYPLMVNRFGNFLVQRCFEHGTPEQ 550
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
++ I + + S+D FG I+K V + +V + L+R+ ++
Sbjct: 551 VIAIANAVRGNT---LSLSMDPFGCHVIQKAFDCVPEEHKAV-MVHELLRRIPETVIHRY 606
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQA--ALEHCLY-LACHEQGCINMNNFIDEMKGPRRK 277
+ V Q L ++ N + + AL + +A E G + + N + ++
Sbjct: 607 --ACHVWQKLFELRWSNEPPQIMTKVNEALRGMWHEVALGETGSLVVQNIFENCVEDEKR 664
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPY----LIETICFSLRGHYIDLSLTKCGS 333
Q + + LS GN+ +QH+ E P+ IE I D S+ + S
Sbjct: 665 QAIEEVLAKIDLLSHGQFGNWCIQHICEHGAPHDKSRAIEHILL----WATDYSMDQFAS 720
Query: 334 FVVQNCLKYRITVNYIVEEFLL-----NSDQ----IFRVACDKYGNYVIQTALIETMRPN 384
VV+ CLK I + ++ +L D+ + +A D+YGNY+IQ L+ +
Sbjct: 721 KVVEKCLK--IGGSEFLDRYLTRVCTGRPDRPRMPLIDIAGDQYGNYLIQWILMNS---- 774
Query: 385 SLHLHQRLVTKLQQNLDSLR 404
+ H + + T +++++ SLR
Sbjct: 775 AAHQREIVATHIRKHMVSLR 794
>gi|388855193|emb|CCF51087.1| related to PUF3-transcript-specific regulator of mRNA degradation
[Ustilago hordei]
Length = 959
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 27/266 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++QEKL S VF+ V Q++ + + +V K +E +E+
Sbjct: 603 IVEFSSDQHGSRFIQEKLDSASDEEKKLVFHEVLPQARQLMTDVFGNYVIQKMLEHGDEE 662
Query: 160 Q---LLR------ITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
Q L R ++L + + VQ + D +S KL + +M+ ++
Sbjct: 663 QRDVLGREMEGHILSLSLGTYGCRVVQKAFDHISASQREKLAAELDGH------IMQCVR 716
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
+ + VV + +E++ H K DFI +A + LA H C + +
Sbjct: 717 --------DQNANHVVQKVIERV--HPTKMDFIPKAFIGQVASLASHCYSCRVLQRCFEC 766
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
+ + + +L + A L ++ GNYV+Q VL+ PY + ++G + LS K
Sbjct: 767 CEEGQTRALLEELHAEAFGLMQHQYGNYVIQWVLQSGKPYDRARVISKIKGLVLTLSRHK 826
Query: 331 CGSFVVQNCLKY--RITVNYIVEEFL 354
S V++ ++ N ++EE L
Sbjct: 827 FASNVIEQVIRTCNSTDRNELLEEIL 852
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 13/225 (5%)
Query: 175 FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIY 234
V+ S D+ GS I++ + + ++ LV + R LM G+ V+ + LE +
Sbjct: 603 IVEFSSDQHGSRFIQEKLDSASDE--EKKLVFHEVLPQARQLMTDVFGNYVIQKMLE--H 658
Query: 235 HHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNF 294
+ D + + H L L+ GC + D + +R+++ + + R+
Sbjct: 659 GDEEQRDVLGREMEGHILSLSLGTYGCRVVQKAFDHISASQREKLAAELDGHIMQCVRDQ 718
Query: 295 SGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK--YRITVNYIVEE 352
+ N+VVQ V+E P ++ I + G L+ V+Q C + ++EE
Sbjct: 719 NANHVVQKVIERVHPTKMDFIPKAFIGQVASLASHCYSCRVLQRCFECCEEGQTRALLEE 778
Query: 353 FLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ F + +YGNYVIQ L ++ +P + R+++K++
Sbjct: 779 LHA---EAFGLMQHQYGNYVIQWVL-QSGKP---YDRARVISKIK 816
>gi|154276964|ref|XP_001539327.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414400|gb|EDN09765.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 847
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 138/316 (43%), Gaps = 24/316 (7%)
Query: 101 LLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
++ + D+Q S +LQ+KL G + ++ + + ++ N++ F+ + E +Q
Sbjct: 480 IVCSNDQQASIFLQQKLKVGTAEQKYEIIEAIVNQAYPLMVNRFGNFLVQRCFEHGTPEQ 539
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
++ I + + S+D FG I+K V +V + L+R+ ++
Sbjct: 540 VIAIANAVRGNT---LSLSMDPFGCHVIQKAFDCVPEEHKAA-MVHELLRRIPETVIHRY 595
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQA--ALEHCLY-LACHEQGCINMNNFIDEMKGPRRK 277
+ V Q L ++ N + + AL + +A E G + + N + ++
Sbjct: 596 --ACHVWQKLFELRWSNEPPQIMAKVNEALRGMWHEVALGETGSLVVQNIFENCVEDEKR 653
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
Q + + LS GN+ +QH+ E P+ + D S+ + S VV+
Sbjct: 654 QAIEEVLAKIDLLSHGQFGNWCIQHICEHGAPHDKSRAIEHILLWATDYSMDQFASKVVE 713
Query: 338 NCLKYRITVNYIVEEFLL-----NSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHL 388
CLK I + ++ +L D+ + +A D+YGNY+IQ L+ + + H
Sbjct: 714 KCLK--IGGSEFLDRYLARVCTGRPDRPRMPLIDIAGDQYGNYLIQWILMNS----AAHQ 767
Query: 389 HQRLVTKLQQNLDSLR 404
+ + T +++++ SLR
Sbjct: 768 REIVATHIRKHMVSLR 783
>gi|300123698|emb|CBK24970.2| unnamed protein product [Blastocystis hominis]
Length = 389
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 14/182 (7%)
Query: 243 IYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQH 302
IY LE C +A G + + ++ R++ + +I +A LS + GNYVVQH
Sbjct: 199 IYSILLEKCYDVARDRNGSMVLRLCYGQVDIDRKEDLARVIIQHAKDLSADPVGNYVVQH 258
Query: 303 VLELEDPY----------LIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITV--NYIV 350
+L L D Y +I I L GHY++LS K S VV+ + + + N I
Sbjct: 259 ILMLPDAYSEEKLARYYSIIRGILSKLAGHYLELSKQKYSSNVVEKSITNSVMLGDNTIF 318
Query: 351 EEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKH 410
E LL + ++ + YG +V+Q L++++ P +R + +++ L R G G +
Sbjct: 319 RE-LLTVSAVQQLLDNHYGMFVLQ-KLLQSIPPQWSKEIERQMKDIEKQLKGGRMGNGPN 376
Query: 411 VY 412
++
Sbjct: 377 LF 378
>gi|336469407|gb|EGO57569.1| hypothetical protein NEUTE1DRAFT_121965 [Neurospora tetrasperma
FGSC 2508]
gi|350290954|gb|EGZ72168.1| ARM repeat-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 824
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 31/296 (10%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I A D GS+++Q+KL S S +V+ + E ++ + Y +V KF E ++
Sbjct: 388 IADFAADRAGSRFIQDKLQSASSEEKAEVWRELMEELMPLMTDVYGNYVVQKFFEHGTQE 447
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + I ++ S +K+G ++K + + R ++LV + LK L +
Sbjct: 448 QKTSMASIIKKN---MLRLSENKYGCRVVQKALDNIFRRY-QVELVNE-LKDHVDKLNKS 502
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQA--ALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ ++ + ++ FIY + + LA ++ C + ++ R
Sbjct: 503 QEGNHVIQMIIKLLPR--DEIGFIYDSFRGPGKVMELALNQYACRVIQRALEHGNEEDR- 559
Query: 278 QILYLIS---VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
LYL+S A +L + GNYV QH++E P + ++ I LS K S
Sbjct: 560 --LYLVSELHKGAHTLITDAYGNYVAQHIIEAGKPEDRARMIAAVMSQTITLSTHKHASN 617
Query: 335 VVQNCLKYRI--TVNYIVEEFLLNSDQIFRVAC--------------DKYGNYVIQ 374
VV+ C+ Y V I + F D + + D + NYVIQ
Sbjct: 618 VVEKCINYGTPEDVRRIRDMFFSPQDGVGGYSSDHQSPDSFLRFLMLDHFANYVIQ 673
>gi|315049231|ref|XP_003173990.1| meiotic coiled-coil protein 2 [Arthroderma gypseum CBS 118893]
gi|311341957|gb|EFR01160.1| meiotic coiled-coil protein 2 [Arthroderma gypseum CBS 118893]
Length = 843
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 131/325 (40%), Gaps = 52/325 (16%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+Q S +LQ+KL G S ++ ++ + ++ N++ F+ + E +Q++ I
Sbjct: 482 DQQASIFLQQKLKVGTSEQKYEIIEAIANQAYPLMINRFGNFLVQRCFEHGTPEQVISIA 541
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKR-------------- 211
I + S+D FG I+K V + +V + L+R
Sbjct: 542 NAIRGNT---LSLSMDPFGCHVIQKAFDCVPEEHKAV-MVHELLRRIPETVIHRYACHVW 597
Query: 212 --LFRLLMMTKPGS--SVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNF 267
LF L +P + V + L ++H +A E G + + N
Sbjct: 598 QKLFELRWSGEPPQIMAKVNEALRGMWHE-----------------VALGETGSLVVQNI 640
Query: 268 IDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
+ ++Q + + L+ GN+ +QH+ E P + D S
Sbjct: 641 FENCVEDEKRQAIEEVLAKIDLLAHGQFGNWCIQHICEHGAPPDKSRAIEHILAWVTDYS 700
Query: 328 LTKCGSFVVQNCLKYRITV---NYIVEEFLLNSDQ----IFRVACDKYGNYVIQTALIET 380
+ + S VV+ CLK T Y+ D+ + +A D+YGNY+IQ L+
Sbjct: 701 MDQFASKVVEKCLKIGGTEFLDRYLARVCTGRPDRPRMPLIDIAGDQYGNYLIQWILL-- 758
Query: 381 MRPNSLHLHQRLVTK-LQQNLDSLR 404
N+ + H+ LV +++++ SLR
Sbjct: 759 ---NAGNQHRELVAGHIRKHMVSLR 780
>gi|443896502|dbj|GAC73846.1| translational repressor Pumilio/PUF3 [Pseudozyma antarctica T-34]
Length = 944
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 141/325 (43%), Gaps = 31/325 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++QEKL S + +F+ V Q++ + + +V K +E +++
Sbjct: 597 VVEFSGDQHGSRFIQEKLDSASAEEKKTLFDEVLPHARQLMTDVFGNYVIQKMLEHGDDE 656
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + ++ + S+ +G ++K +A P + + K L +
Sbjct: 657 QRAVLAREMEGN---VLSLSLGTYGCRVVQKAFDYIA--PEQREKLAKELDGHIMQCVRD 711
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ + VV + +E++ + FI +A + H LA H C + + + + +
Sbjct: 712 QNANHVVQKVIERV--DAGEVAFIPEAFVGHVAGLASHCYSCRVLQRAFEHCTEAQARPL 769
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + A +L ++ GNYV+Q VL+ P + +RG+ + LS K S V++
Sbjct: 770 LDELHHEAYALMQHQYGNYVIQWVLQRGQPNDRAQVIAKIRGNVLTLSRHKFASNVIEEV 829
Query: 340 LKYR--ITVNYIVEEFLL------------NSDQIFRVAC------DKYGNYVIQTALIE 379
++ ++ +V+E L + Q ++A D++ NYV+Q L +
Sbjct: 830 IRTSSAADLDALVDEILTPKQVPSAGADAEAAQQTTKIAPAVLMMKDQFANYVLQRFLEK 889
Query: 380 TMRPNSLHLHQRLVTKLQQNLDSLR 404
RLV +Q +L S R
Sbjct: 890 A----DGAQRARLVEAVQPSLLSAR 910
>gi|308198245|ref|XP_001387179.2| protein necessary for high temperature growth [Scheffersomyces
stipitis CBS 6054]
gi|149389106|gb|EAZ63156.2| protein necessary for high temperature growth [Scheffersomyces
stipitis CBS 6054]
Length = 528
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 149/306 (48%), Gaps = 35/306 (11%)
Query: 98 SGILLLAQDEQGSQYLQEKLTSG-----DSRF--LDKVFNVVSEFTFQIICNQYARFVFG 150
S IL L++D+ G ++LQ+K+ +R + +F + + +++I + + ++
Sbjct: 134 SDILRLSKDQYGCRFLQKKIDENLIPNYQTRLNNFEVIFAQIHPYLYELIIDPFGNYLIQ 193
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
K I CNE L + LQI Q LF Q S+++ G+ +++K++ + N+ L +L++K +K
Sbjct: 194 KLIVYCNESNL-NLILQIL-QYNLF-QISINQHGTRALQKIIDNLNNQYQL-NLLIKGMK 249
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
L+ G+ V+ + L + + + FIY + +E +A H+ GC + ++
Sbjct: 250 PYIIELIKDLNGNHVIQKILNK--YPPSDCQFIYDSIIEGLYVVASHKHGCCVLQKCLNH 307
Query: 271 MKGPRRKQILYLIS--VNAASLSRNFSGNYVVQHVLELEDPYLIETICFS--LRGHYIDL 326
+ + ++ I N L + GNYV+Q+++ + + + I F L+ +L
Sbjct: 308 VTMTQLQEFSACILDFANFQLLINDQFGNYVLQYLISI-NSFEINYKIFQNFLQFGINNL 366
Query: 327 SLTKCGSFVVQNCLK-------YR--ITVNY------IVEEFLLNSDQIFRVACDKYGNY 371
K S VV+ LK Y VN+ ++ L+N + ++ D YGNY
Sbjct: 367 CNLKFSSNVVEKFLKNCYNNEAYNGVTAVNFSNLKMELIYNILIND--LNKLINDPYGNY 424
Query: 372 VIQTAL 377
VIQT +
Sbjct: 425 VIQTLI 430
>gi|221504265|gb|EEE29940.1| pumilio, putative [Toxoplasma gondii VEG]
Length = 1913
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 82/327 (25%), Positives = 149/327 (45%), Gaps = 36/327 (11%)
Query: 101 LLLAQDEQGSQYLQEKLTSGDSRFLDKV---FNVVSEFTFQIICNQYARFVFGKFIETCN 157
L A+D + +LQE+L + D+V F ++ + +Q+ +V KF ET +
Sbjct: 998 LEFAKDPFAAVFLQEQLET--CPLADRVPILFQLLPH-ALDLAVDQHGNYVLQKFFETGS 1054
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
+ + + Q+T D +F + S++ +G I++ ++++ P L LV + LK +
Sbjct: 1055 DKEKEWLAAQLT--DHVF-RLSLEVYGCRVIQRAVESLP-VPAQLRLV-RELKDHVITCV 1109
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
+ G+ V+ +C E++ + FI A ++ H GC + ++ +
Sbjct: 1110 EDQHGNHVIQKCAERL--PSPSVQFIIDAFKGQEARMSVHSYGCRVIQRLLEACPMSQVA 1167
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLEL----EDPYLIETICFSLRGHYIDLSLTKCGS 333
++ ++ L R+ GNYVVQHVLE + +I+ +C + I LS K
Sbjct: 1168 ALIDVVMAELCMLIRDQFGNYVVQHVLEFGRDADKMKIIDFMCEDI----IALSTEKYAC 1223
Query: 334 FVVQNCL--------KYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNS 385
VV+ L + RI + E + + V D+YGNYV+Q M
Sbjct: 1224 NVVERALTLNAMGRARRRIITAALGPEMM--GQPLKMVMLDRYGNYVVQ----RMMEVAP 1277
Query: 386 LHLHQRLVTKLQQNLDSL-RFGYGKHV 411
L L+ L++++D L +F YGKH+
Sbjct: 1278 DDLRPPLLRLLREHVDILKKFTYGKHI 1304
>gi|171686492|ref|XP_001908187.1| hypothetical protein [Podospora anserina S mat+]
gi|170943207|emb|CAP68860.1| unnamed protein product [Podospora anserina S mat+]
Length = 752
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 146/357 (40%), Gaps = 38/357 (10%)
Query: 39 PSPPVPLYPQSTWAVPSLSGRSTVPNLSGTSNPQYETITSSNFQTP-------LGFQANP 91
P P+P YP + VP + S G + + E + N + GF
Sbjct: 305 PGYPLPQYPFAHNGVPPVRPSSDRDPARGVRSLKLEEFKTGNKSSKRFELKDIYGF---- 360
Query: 92 FQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGK 151
I+ + D+ GS+++Q KL + +S ++VF+ + ++ + + +V K
Sbjct: 361 --------IVEFSGDQHGSRFIQNKLETANSDDKNQVFHEIEPNAIVLMKDLFGNYVIQK 412
Query: 152 FIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKR 211
F E N+ Q + + + V+ S+ + ++K + V L++ + +K
Sbjct: 413 FFEHGNQAQKQVLAAAMKGK---VVELSMQMYACRVVQKALSHV-----LVEQQAELVKE 464
Query: 212 LF-RLLMMTKP--GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
L +L + K G+ VV + ++ + + FI+ L+ H GC + +
Sbjct: 465 LEPEILTIVKDQNGNHVVQKIIQTVPRQHIG--FIFDCFRGRVSELSSHAYGCRVIQRAL 522
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
+ ++ I+ + A L + GNYV QHV+ P + + S
Sbjct: 523 EHGNEADKQSIMKELHSCAQMLIMDQYGNYVTQHVITDGSPDDRSKMVALVMSQLPIFSK 582
Query: 329 TKCGSFVVQNCLKYRITVNY--IVEEFLLNSDQ----IFRVACDKYGNYVIQTALIE 379
K S VV+ C+K+ I + F+ D + + D++GNYV+QT L E
Sbjct: 583 HKFASNVVEKCIKHGTADQQRDIRDRFMSRGDDGNSFLVSLTKDQFGNYVLQTLLSE 639
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 254 LACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIE 313
+ + G + N ++ + Q+ + I NA L ++ GNYV+Q E + +
Sbjct: 364 FSGDQHGSRFIQNKLETANSDDKNQVFHEIEPNAIVLMKDLFGNYVIQKFFEHGNQAQKQ 423
Query: 314 TICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVI 373
+ +++G ++LS+ VVQ L + + V E +I + D+ GN+V+
Sbjct: 424 VLAAAMKGKVVELSMQMYACRVVQKALSH-VLVEQQAELVKELEPEILTIVKDQNGNHVV 482
Query: 374 QTALIETM 381
Q +I+T+
Sbjct: 483 QK-IIQTV 489
>gi|440638601|gb|ELR08520.1| hypothetical protein GMDG_03219 [Geomyces destructans 20631-21]
Length = 976
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 133/311 (42%), Gaps = 30/311 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q KL + +S +++F + Q++ + + +V K E N+
Sbjct: 552 VVEFSGDQHGSRFIQMKLETANSDEKEQIFREIQPNALQLMTDVFGNYVIQKLFEHGNQI 611
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q +I +I ++ S+ +G ++K ++ V L D + ++ L ++
Sbjct: 612 QK-KILAEIMKNH--VIELSLQMYGCRVVQKALEHV-----LADQQAELVRELQADVLKC 663
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ + +E+ + FI A LA H GC + ++ P +
Sbjct: 664 VKDQNGNHVIQKAIERC--PTEQVQFILDAFRTQVHTLATHPYGCRVIQRMLEYCTPPDQ 721
Query: 277 KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
+L + A L + GNYVVQHV++ P + + + LS K S VV
Sbjct: 722 TSVLKELFACAQMLIVDQYGNYVVQHVIQHGKPEDQAKLISMVTNQVLTLSKHKFASNVV 781
Query: 337 QNCLKYRIT------VNYIVEEFLLNSDQIFRVACDKYGNYVIQT-----------ALIE 379
+ + T V IV S + + D+YGNYVIQ A +E
Sbjct: 782 ERSISCGTTEQRQTIVAKIVALESDGSSPLQLMMKDQYGNYVIQKLLGLLQGDERDAFVE 841
Query: 380 TMRPNSLHLHQ 390
++P + L +
Sbjct: 842 DIKPQLMQLKK 852
>gi|794145|emb|CAA58660.1| MPT5=HTR1 [Saccharomyces cerevisiae]
Length = 812
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 159/363 (43%), Gaps = 60/363 (16%)
Query: 103 LAQDEQGSQYLQEKL-TSGDSRFL-DKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
LA D+ G ++LQ+KL T +S + D ++ + F +I + + ++ K + +Q
Sbjct: 218 LATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTAEQ 277
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR------ 214
TL I + Q S++++G+ S++K++ V N + DL++K + F
Sbjct: 278 K---TLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQI-DLIIKGFSQEFTSIEQVV 333
Query: 215 LLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALE--HCLYLACHEQGCINMNNFIDEMK 272
L+ G+ V+ +C+ + +K FI A +E + + ++ H+ GC + ++
Sbjct: 334 TLINDLNGNHVIQKCIFKFSP--SKFGFIIDAIVEQNNIITISTHKHGCC----VLQKLL 387
Query: 273 GPRRKQILYLISVNAA----SLSRNFSGNYVVQHVLELE--DPYLIETICFSLRGHYIDL 326
Q ++ ISV L + GNY++Q +L+++ D YL+ + L L
Sbjct: 388 SVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQL 447
Query: 327 SLTKCGSFVVQNCLK--YRITVNYIVEE---------------------FLLNSDQIFRV 363
S K S VV+ +K +RI +IV LL + IF V
Sbjct: 448 SCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTV 507
Query: 364 AC-----DKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIKDC 418
D +GNY +QT L++ + L + + + QN S YG NF D
Sbjct: 508 NLNVLIRDNFGNYALQT-LLDVKNYSPLLAYNKNSNAIGQN-SSSTLNYG----NFCNDF 561
Query: 419 DLQ 421
L+
Sbjct: 562 SLK 564
>gi|395333575|gb|EJF65952.1| ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 410
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 150/347 (43%), Gaps = 53/347 (15%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFN-VVSEFTFQIICNQYARFVFGKFIETCNE 158
I+ + D+ GS+++Q+KL S S ++ VF+ +V ++ Q++ + + +V K E
Sbjct: 52 IVEFSGDQHGSRFIQQKLESASSEEMEIVFDEIVPQYAVQLMQDVFGNYVVQKMFEYGTA 111
Query: 159 DQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM 218
Q R+ +++ + + S+ +G ++K ++ V + +M
Sbjct: 112 AQKARL---VSTMEGQVLGLSLQMYGCRVVQKAIEYVGPD---------------QQVMF 153
Query: 219 TKPGSSVVLQC---------LEQIYHHNNKNDFIYQAALEHCLY-LACHEQGCINMNNFI 268
+ S VL+C +++I H + A +Y L+ H GC +
Sbjct: 154 VQELSPSVLRCVKDANGNHVIQKIIEHVVPERLAFVNAFRGSVYELSTHPYGCRVLQRCF 213
Query: 269 DEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSL 328
+ + + + +L + ++L + GNYVVQ VLE P I L G +++
Sbjct: 214 EYLPDEQTRPLLDELHKYVSNLMIDQFGNYVVQFVLEHGTPQDRAMIIAKLTGQMNNMAK 273
Query: 329 TKCGSFVVQNCLKYRITVN-----YIVEEFLLNSDQ-----IFRVACDKYGNYVIQTALI 378
K S V C K +T + +++E + Q + + D +GNYV+Q AL
Sbjct: 274 HKFASNV---CEKALVTADPDSRRQLIDEIMTPKQQDGPSPLMSLMKDSFGNYVLQRALT 330
Query: 379 ETMRPNSLHLHQRLVTKLQQNLDSLR---FGYGKHVY----NFIKDC 418
++L++K++ +L ++R Y KH+ NF++
Sbjct: 331 VAEGEQK----EQLISKVRPHLVNMRRYSSAYSKHLSASKCNFVRSA 373
>gi|145509346|ref|XP_001440614.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407837|emb|CAK73217.1| unnamed protein product [Paramecium tetraurelia]
Length = 648
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 181/410 (44%), Gaps = 32/410 (7%)
Query: 16 NLSLSFENLQVNDPSYSSFNEIHPSPPVPLYPQSTWAVPSLSGRSTVPNLSGTSNPQYET 75
++ LS ++LQ+ PS S + I SP +S+ + S + N + P
Sbjct: 249 SIQLSIKSLQITLPSELSTSLIKQSP------KSSPIIDSFLFSPKLNNFTPQVGPIQSR 302
Query: 76 ITSSNFQ------TPLGFQANPFQHCAN--SGILLLAQDEQGSQYLQEKLTSGDSRFLDK 127
+ +FQ TP+ Q+ ++ + + GS+ +Q+ T+ LD+
Sbjct: 303 VRLQSFQLEETIQTPIDEWTEDLQNLEQIRGNVVNFVKTQHGSRLIQKYFTTCTQIELDQ 362
Query: 128 VFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSS 187
+ + ++ + YA ++FG ++C Q L I I ++ V + DK G+ +
Sbjct: 363 LLQEIGPHLPDLMIDPYANYMFGSLSQSCAPHQRLYILQTIGNR---LVDIACDKKGTHA 419
Query: 188 IRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAA 247
I+ L+ ++ + ++V ++K L + G+ ++ + + + ++ ++I+
Sbjct: 420 IQSLVSLISCKQE-EEMVENSIKNNIIPLTLDSQGTHLIKKIIARF--SEDRLNYIFHKL 476
Query: 248 LEHCLYLACHEQGCINMNNFIDEMKGPRRKQ--ILYLISVNAASLSRNFSGNYVVQHVLE 305
++ + + H+ G + + I + K K I+ + + + ++ GNY VQHV++
Sbjct: 477 MDRFIQVVNHQFGLCVLKDLITKFKNNLEKSAIIINRMKDHLDEIIQDPFGNYGVQHVID 536
Query: 306 LEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFL--LNSDQI-FR 362
+ I + I LS+ K S VV+ C+ T + F+ L+ D I
Sbjct: 537 VYGDLRCNCIIDKILLKLIQLSIHKYSSNVVEKCILE--TSPKTQKRFIKQLSQDIICLE 594
Query: 363 VACDKYGNYVIQTALIETMR---PNSLH--LHQRLVTKLQQNLDSLRFGY 407
+ +K+G +V+Q AL E + +SL L++ L + QN+ F Y
Sbjct: 595 LMKNKFGTFVLQKALQEADKLSETDSLQQALYRNLPSIYAQNIRQKWFEY 644
>gi|242807950|ref|XP_002485062.1| Pumilio-family RNA binding repeat domain protein [Talaromyces
stipitatus ATCC 10500]
gi|218715687|gb|EED15109.1| Pumilio-family RNA binding repeat domain protein [Talaromyces
stipitatus ATCC 10500]
Length = 856
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 139/315 (44%), Gaps = 32/315 (10%)
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRIT 165
D+Q S +LQ+KL G + + + + ++ N++ F+ + E +Q++ I
Sbjct: 494 DQQASIFLQQKLKVGTAEQKYDIIEAIVSQAYPLMVNRFGNFLVQRCFEHGTPEQVIAIA 553
Query: 166 LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSV 225
I + S+D FG I+K V + +V + L+R+ ++ +
Sbjct: 554 NSIKGNT---LSLSMDAFGCHVIQKAFDCVPEEYKAM-MVHELLRRIPETVIHRY--ACH 607
Query: 226 VLQCLEQIYHHNNKNDFIYQA--ALEHCLY-LACHEQGCINMNNF----IDEMKGPRRKQ 278
V Q L ++ +N + + AL + +A E G + + N ++E K P ++
Sbjct: 608 VWQKLFELRWNNEPPQIMTKVNEALRGMWHEVALGETGSLVVQNIFENCVEEEKRPAIEE 667
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
+L I + LS GN+ +QH+ E P + D S+ + S VV+
Sbjct: 668 VLANIDL----LSHGQFGNWCIQHICEHGAPRDKNRAIEHILQWCADYSMDQFASKVVEK 723
Query: 339 CLKYRITVNYIVEEFLL-----NSDQ----IFRVACDKYGNYVIQTALIETMRPNSLHLH 389
CLK I + ++ +L +D+ + +A D+YGNY+IQ L + H
Sbjct: 724 CLK--IGGSEFLDRYLARVCTGRADRPRMPLIDIAGDQYGNYLIQWILGNA----APHQR 777
Query: 390 QRLVTKLQQNLDSLR 404
+ + T +++++ SLR
Sbjct: 778 ELVATHIRKHMVSLR 792
>gi|325190256|emb|CCA24733.1| pumiliolike mating protein M90 putative [Albugo laibachii Nc14]
Length = 595
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 152/341 (44%), Gaps = 38/341 (11%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIE--TCN 157
+L +A+D+ GS+++Q +L S + VF ++ + + +V K E T +
Sbjct: 263 LLDVARDQTGSRFIQLRLEFASSDERNAVFEEALPQALVLMTDVFGNYVIQKLFELGTTH 322
Query: 158 EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLM 217
+ Q L I S V+ ++ +G I+K ++ V N + ++ + + R +
Sbjct: 323 QQQQL-----IASMKSSMVELALQVYGCRVIQKALE-VVNVYEKVTILRELIGHTMRCI- 375
Query: 218 MTKPGSSVVLQCLEQIYHHNNKN-----------DFIYQAALEHCLYLACHEQGCINMNN 266
+ + G+ V+ +C+E + N N FI A + L+ H GC +
Sbjct: 376 IDQNGNHVIQKCIEVCSYKNPANTESKQLRGTDVQFIIDAFMGKAAKLSTHAYGCRVIQR 435
Query: 267 FIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHV-LELEDPY--LIETICFSLRGHY 323
++ + + ++ + L +N GNYVVQHV + D + +IE+I ++
Sbjct: 436 ILEHCELEQTLPLVDELIWKCRELVKNQFGNYVVQHVIMHGADNHRAMIESILLEELPYW 495
Query: 324 IDLSLTKCGSFVVQNCLKYRITVNYIVE-EFLLNSDQ------IFRVACDKYGNYVIQTA 376
S+ K S VV+ L++ + + +L D+ + + YGNYV+Q
Sbjct: 496 ---SMHKYASNVVETYLEHTDADKICLAIDSILAPDESGVPRTLLTMMKHMYGNYVVQKL 552
Query: 377 LIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHVYNFIK 416
L + R + H R++ +++N L +F YG+HV +K
Sbjct: 553 LDKADRTS----HARILGIIKENSAFLEKFTYGRHVLGRLK 589
>gi|401415042|ref|XP_003872017.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488239|emb|CBZ23484.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 470
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 172 DQLFVQ---ASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQ 228
D+L Q ++D+ G R L++ ++ P + LV + R + T + VLQ
Sbjct: 204 DELVPQFNIVAMDQHGCHVARTLIEYIST-PKMEALVPYIDPHVIRQMATTTQHTRRVLQ 262
Query: 229 CLEQIYHHNNKNDF--IYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVN 286
I+ H+ + I + C L+ +QGCI + I+ K +++ ++ +
Sbjct: 263 A---IFEHHKSDALMPIVEVVTSDCQRLSVTQQGCIAIIRIIEYAKPAQKRTLISALVPL 319
Query: 287 AASLSRNFSGNYVVQHVLELEDPYL-IETICFSLRGHYIDLSLTKCGSFVV-------QN 338
++L++N GNYVVQ +L+ + Y+ + + S +GH+++LS K S V+ Q
Sbjct: 320 LSTLAKNQFGNYVVQCILKNMEGYVSLNDLVGSFQGHWVELSCDKYSSNVMEKIVGMLQG 379
Query: 339 CLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
L+ R IV E + + + + + +GNYV+Q +
Sbjct: 380 SLRQR-----IVNELIFDVAHLQCLMQNSFGNYVLQAVI 413
>gi|219116400|ref|XP_002178995.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409762|gb|EEC49693.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 319
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 142/316 (44%), Gaps = 18/316 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ QD+ GS+++Q++L GD+ V + V ++ + + +V K ++ + D
Sbjct: 8 IVEFCQDQNGSRFIQQRLELGDTSEQQIVMSEVLPAIRRLRNDVFGNYVIQKLLDFGSAD 67
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
I + S+ +Q S+ +G ++K ++A+ L L+M+ + +
Sbjct: 68 MKSEIRNTLESE---MLQLSLQMYGCRVVQKALEALPE-EELPRLLMEFHHNVLSCIH-D 122
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ + V+ +C+E + + +FI L + L+CH GC + ++ + ++ +
Sbjct: 123 QNENHVIQKCVEFL---TEQIEFIINDVLVNTKTLSCHPYGCRVLQRILEHCEKTKKTAV 179
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETIC-FSLRGHYIDLSLTKCGSFVVQN 338
L I L + GNYV+QHVL+ ++I + + LS K S VV+
Sbjct: 180 LDEICKAHRKLLDDQYGNYVIQHVLQFGRQSDRDSILHIVVENGLLGLSRQKFASNVVEK 239
Query: 339 CLKY--RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
LKY IV E L I + D Y NYV+QT L + L L+ +L
Sbjct: 240 LLKYGNGSQRRAIVREML---KVILLMVRDAYANYVVQTTLDVVPESDEKRL---LLKEL 293
Query: 397 QQNLDSLR-FGYGKHV 411
+ + LR + + KH+
Sbjct: 294 SAHSEELRNYTFAKHI 309
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,222,631,109
Number of Sequences: 23463169
Number of extensions: 248467326
Number of successful extensions: 621855
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 594
Number of HSP's that attempted gapping in prelim test: 612953
Number of HSP's gapped (non-prelim): 3255
length of query: 422
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 277
effective length of database: 8,957,035,862
effective search space: 2481098933774
effective search space used: 2481098933774
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)