BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047627
(422 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LVC3|PUM12_ARATH Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2
Length = 596
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 179/319 (56%), Gaps = 11/319 (3%)
Query: 96 ANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIET 155
A I LA+D+ G ++LQ + D ++ +FN + ++ +++ + + ++ K +E
Sbjct: 278 ARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKLLEV 337
Query: 156 CNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
CNEDQ ++I IT + L ++ S D G+ +++K+++ A R + +++ ALK
Sbjct: 338 CNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVE-TAKREEEISIIISALKHGIVH 396
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L+ G+ VV +CL+ + + K F+++AA+ HC+ LA GC + + +G +
Sbjct: 397 LIKNVNGNHVVQRCLQYLLPYCGK--FLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQ 454
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++ ++ I+ NA LS++ GNYV+Q+V EL+ + I L G+Y +LS+ KC S V
Sbjct: 455 KQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNV 514
Query: 336 VQNCLKYRITVN--YIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
V+ CLK + I+ E L+N ++ +V D YGNYVIQ AL + + ++H LV
Sbjct: 515 VEKCLKLADDKHRARIIRE-LINYGRLDQVMLDPYGNYVIQAAL----KQSKGNVHALLV 569
Query: 394 TKLQQNLDSLRFG-YGKHV 411
++ N+ SLR YGK V
Sbjct: 570 DAIKLNISSLRTNPYGKKV 588
>sp|Q9LXC5|PUM21_ARATH Putative pumilio homolog 21 OS=Arabidopsis thaliana GN=APUM21 PE=3
SV=1
Length = 517
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 175/348 (50%), Gaps = 34/348 (9%)
Query: 87 FQANPFQHCANSGILLLAQDEQGSQYLQEKLTSGDSRFL----DKVFNVVSEFTFQIICN 142
F A PF + L D+ S+Y + F+ DK N +S + C
Sbjct: 170 FNAPPFTPSS-----LTQPDDSSSRYSGKPFPPPPLSFVSPGVDKDRNWLSSLLDMMTCA 224
Query: 143 QYARFV-FGKFIETCN-------EDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKA 194
Q RF F K+++ + E L +I +T+ ++F+ + +++GS ++R L +
Sbjct: 225 Q--RFTEFQKYLQDLDTYPTAERESHLFKIGSALTTTKRIFLHLATNQYGSQALRILFR- 281
Query: 195 VANRPPLLD-LVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLY 253
R P LD L+ A+ F LLM K G +++ + + K + +Y+ E+ L+
Sbjct: 282 ---RSPSLDHLLFCAVDTNFFLLMSDKYGRGLIIPAIRAV--DKTKKESLYKLTYEYTLH 336
Query: 254 LACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIE 313
LA E GC+ +NN + E++G R I ++ NA LS + G +VVQ++L L++P
Sbjct: 337 LARLETGCLALNNVLQEIRGIYRDLIFECVANNADWLSFDPYGTHVVQNILILQNPVATT 396
Query: 314 TICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVI 373
I LRG + L++ + GS+VV+ CLK + ++EEF N+ + R+ DK+GN+V+
Sbjct: 397 AIAERLRGSFFRLAMERQGSYVVEKCLKSDFARDQVLEEFRGNAKEWVRMTTDKFGNFVV 456
Query: 374 QTALI----ETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIKD 417
Q+AL + MRP L + V KL+ + + G G++ I++
Sbjct: 457 QSALRVMKEKEMRP----LLREFVEKLRPHFGKMEIGRGRNTLRVIQE 500
>sp|Q9LM20|PUM8_ARATH Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana
GN=APUM8 PE=3 SV=2
Length = 515
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 158/298 (53%), Gaps = 14/298 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ +A+D+ G ++LQ G + +F+ V +++ + + ++ K ++ CNE+
Sbjct: 203 VYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKLLDVCNEE 262
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I L +TS+ ++ S++ +G+ +++L++++ R + LV AL+ F L+
Sbjct: 263 QRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQI-SLVKSALRPGFLNLIRD 321
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+ + N+FI++ A + C+ +A H GC + I G +R+++
Sbjct: 322 LNGNHVIQRCLQCL--STEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKL 379
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS N+ L+++ GNY VQ VLEL D I + L+GHY++LS+ K S +V+ C
Sbjct: 380 VTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERC 439
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA-----------LIETMRPNSL 386
L + + L++ + D Y N+VIQ A L+E +RP+S+
Sbjct: 440 LTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHATLVEVIRPHSI 497
>sp|Q9C9R6|PUM7_ARATH Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana
GN=APUM7 PE=3 SV=2
Length = 650
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 152/294 (51%), Gaps = 7/294 (2%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ L+A+D+ G ++LQ G S +FN V +++ + + ++ K ++ C E+
Sbjct: 338 VYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEE 397
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I L T + ++ S++ +G+ +++L++ + + + LV AL+ F L+
Sbjct: 398 QRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGK-QISLVKLALRPGFLDLIKD 456
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+ +CL+ + +NK FI+ AA + C +A H GC + I +R+++
Sbjct: 457 LNGNHVIQRCLQCLSTEDNK--FIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKL 514
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS N+ L+++ GNY VQ V+EL P + + L+GHY+ LS+ K S +V+ C
Sbjct: 515 IAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERC 574
Query: 340 LKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
L + + L++ ++ D Y N+VIQ AL T P LH LV
Sbjct: 575 LMHCPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAATKGP----LHASLV 624
>sp|Q9LDW3|PUM11_ARATH Pumilio homolog 11 OS=Arabidopsis thaliana GN=APUM11 PE=3 SV=2
Length = 556
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 157/284 (55%), Gaps = 11/284 (3%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
+ L+A+D+ G + LQ+ + G+ + +F V ++ + + ++ K IE CNE+
Sbjct: 246 VYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCNEE 305
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q +I +++TS+ L V+ S++ +G+ ++KL++ V + + LV AL F L
Sbjct: 306 QRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQ-ISLVKSALVPGFLSLFRE 364
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
G+ V+L CL+ + N N FI +AA + C+ +A GC + + G + +++
Sbjct: 365 LNGNHVILNCLK--FFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKL 422
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
+ IS N+ L+++ GNY+VQ+++E + + + F LRG+Y+ L+ K GS VV+ C
Sbjct: 423 VDEISRNSLLLAQDPFGNYLVQYIIEKKVGGV--NVLFELRGNYVKLATQKFGSHVVEKC 480
Query: 340 LKYRI-TVNYIVEEF--LLNSDQIFRVACDKYGNYVIQTALIET 380
L+Y + + IV E +LN + + D Y NYVIQ AL +T
Sbjct: 481 LRYYPESRSQIVNELVSVLNFGYLLQ---DPYANYVIQCALSKT 521
>sp|Q9LVG3|PUM18_ARATH Pumilio homolog 18 OS=Arabidopsis thaliana GN=APUM18 PE=2 SV=1
Length = 327
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 138/269 (51%), Gaps = 8/269 (2%)
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
F + I ++ +L R+ +TS F+ KFGS ++KL+ + A
Sbjct: 58 FKEMISNSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSDDVDAFF---CAA 114
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ R F + K S V ++ + + +Y+ L H L LAC + GCI +N+ I
Sbjct: 115 ILRRFLHITTDKYASYVTIRAM--VVFDKVMKKALYERILYHALDLACDQHGCIALNDII 172
Query: 269 DEMKGPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
+ P R Q+L L++ NA LS + SGN+VVQHVL L D I I +L G I+LS
Sbjct: 173 TDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELS 232
Query: 328 LTKCGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
K GS++V+ L+ ++ +V E L + D++ R+A +++GN+V+ AL T + + +
Sbjct: 233 FKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKALRFT-KMSRM 291
Query: 387 HLHQRLVTKLQQNLDSLRFGYGKHVYNFI 415
L LV KL + LR +G ++ N +
Sbjct: 292 DLFWGLVQKLMPFIRLLRRSHGSNIANIL 320
>sp|Q1PFN9|PUM9_ARATH Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1
Length = 564
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 153/298 (51%), Gaps = 15/298 (5%)
Query: 102 LLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
L+A+D+ G + LQ+ + G + + + ++ + + ++ K + +E+Q
Sbjct: 256 LMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKLFDVSDEEQR 315
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKP 221
I +TS + ++ ++ +G+ ++K+++ V + + LV LK F L+
Sbjct: 316 TLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIA-LVKSGLKPGFLALVKDLN 374
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G+ V+ CL+ + N N+F+ +AA ++C +A H GC + I G +R++++
Sbjct: 375 GNHVIQSCLQTL--GPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVA 432
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL- 340
IS N+ LS++ GNYVVQ++++ + + + F R HY +L+ K S V++ CL
Sbjct: 433 EISRNSLHLSQDPFGNYVVQYLIDQQVSAVKLLVQF--RMHYAELATQKFSSHVIEKCLR 490
Query: 341 KYRITVNYIVEEFLL--NSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
KY + IV E L N + + + D Y NYVIQTAL T P + +LV K+
Sbjct: 491 KYPESRAEIVRELLCVPNFEYLLQ---DPYANYVIQTALSVTKGP----VRAKLVAKV 541
>sp|Q9LSS8|PUM19_ARATH Putative pumilio homolog 19 OS=Arabidopsis thaliana GN=APUM19 PE=3
SV=2
Length = 327
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 136/269 (50%), Gaps = 8/269 (2%)
Query: 149 FGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKA 208
F + I ++ +L R+ +TS F+ KFGS ++KL+ + A
Sbjct: 58 FKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSDDVDAFF---CAA 114
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+ R F + K S V ++ + + +Y+ L H L LAC + GCI +N+ I
Sbjct: 115 ILRRFLHITTDKYASYVTIRAM--VVFDKVMKKALYERILYHALDLACDQHGCIALNDII 172
Query: 269 DEMKGPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLS 327
+ P R Q+L L+ NA LS + SGN+VVQHVL L D I I +L G I+LS
Sbjct: 173 TDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELS 232
Query: 328 LTKCGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPNSL 386
K GS++V+ L+ ++ +V E L + D++ R+A +++GN+V+ AL T + +
Sbjct: 233 FKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKALRFT-KEMRM 291
Query: 387 HLHQRLVTKLQQNLDSLRFGYGKHVYNFI 415
L LV KL + LR +G ++ N +
Sbjct: 292 DLFWGLVQKLMPFIHLLRRSHGNNIANIL 320
>sp|O81465|PUM15_ARATH Pumilio homolog 15 OS=Arabidopsis thaliana GN=APUM15 PE=3 SV=1
Length = 477
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 155/339 (45%), Gaps = 27/339 (7%)
Query: 57 SGRSTVPNLSGTSNPQYETITSSNFQ--TPLGFQANPFQHCANSGILLLAQDEQGSQYLQ 114
SG TV G S S N + L A + + + +L A+D S LQ
Sbjct: 110 SGGRTVSGSRGISRSTDFVGASQNLRPFVSLDDDAYGYMYGIRNTLLSRAKDGIESHMLQ 169
Query: 115 EKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQL 174
+ G +DK+F+ + +++ + Y VF K +E C ++Q+ R+ + +
Sbjct: 170 YVIAKGLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVLEEPFE 229
Query: 175 FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIY 234
FV+ V G+ +I+ LM+++ + + M+ L + LL V+L C Q
Sbjct: 230 FVRLCVHTHGTHAIQGLMRSLCSEEQ-ISRFMETLCYVSLLLTKDVIAHRVILFCFNQFS 288
Query: 235 HHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI----DEMKGPRRKQILYLISVNAASL 290
+ + ++ + +++C +A + GC + I E++ P K+I+ + A L
Sbjct: 289 PSHTR--YLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPLIKEIISI----AVRL 342
Query: 291 SRNFSG----------NYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL 340
N G NYVVQ++L L+D + + L G+Y+ LS K GS VVQ CL
Sbjct: 343 CGNCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCL 402
Query: 341 KYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALI 378
+ R + I+ E L + D + D YG+YVIQTA I
Sbjct: 403 ESREFSSRRIIAELLSDIDSLL---VDPYGDYVIQTAWI 438
>sp|Q9LP21|PUM10_ARATH Putative pumilio homolog 10 OS=Arabidopsis thaliana GN=APUM10 PE=3
SV=2
Length = 528
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 157/308 (50%), Gaps = 21/308 (6%)
Query: 102 LLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQL 161
L+A+D+ G + LQ+ + G +F + + ++ + ++ K + +E+Q
Sbjct: 220 LMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKLLVVSDEEQR 279
Query: 162 LRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKP 221
I +TS+ + ++ ++ G+ I+K++K V + + LV AL+ F +L+
Sbjct: 280 TMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIA-LVKSALEPGFLVLVNDSN 338
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY 281
G V+ CLE + ++NK F+ +AA E+C LA H+ GC + + G + ++++
Sbjct: 339 GYHVLQSCLEFLVPNDNK--FVVEAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLVA 396
Query: 282 LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCL- 340
IS ++ LS++ GNYVVQ +++ + + + R H I+L+ K S V++ CL
Sbjct: 397 EISRDSLRLSQDPFGNYVVQCLIDQQVSSV--NLLLPFRTHCIELATQKFSSHVIEKCLR 454
Query: 341 KYRITVNYIVEEFLL--NSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQ 398
KY + IV E L N +Q+ + D Y NYVIQTAL T + RLV K++
Sbjct: 455 KYPESRAEIVRELLSYPNFEQLLQ---DPYANYVIQTALSVTKGA----VRARLVEKVK- 506
Query: 399 NLDSLRFG 406
RFG
Sbjct: 507 -----RFG 509
>sp|Q8TB72|PUM2_HUMAN Pumilio homolog 2 OS=Homo sapiens GN=PUM2 PE=1 SV=2
Length = 1066
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 160/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ ++K L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 847
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 848 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 905
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 906 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 965
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 966 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1021
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1022 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1051
>sp|Q9C8B8|PUM17_ARATH Putative pumilio homolog 17 OS=Arabidopsis thaliana GN=APUM17 PE=5
SV=2
Length = 332
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 138/270 (51%), Gaps = 23/270 (8%)
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL 212
I + L+ + +TS F+ + +K GS S++KLM+ + A+ RL
Sbjct: 65 ISVLDTGMLMWMASFLTSDSDYFMVITRNKNGSKSLQKLMRMSDDMDVFF---FVAIMRL 121
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
F +M+ K S V +Q + +I+ + K + +Y L + L+LA + GCI +N I E+
Sbjct: 122 FIHVMIDKYASYVAIQGM-RIFKQD-KRELMYDHILRYALFLARDQYGCIALNEIIKELD 179
Query: 273 GPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
P R +++ ++S NA LS + GN+VVQHVL+L D I L G+ ++LS K
Sbjct: 180 DPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKY 239
Query: 332 GSFVVQNCLKYR-ITVNYIVEEFLL-NSDQIFRVACDKYGNYV----------IQTA--- 376
GS++V+ L+ R I + IV + L ++ + R+A + GN+V I TA
Sbjct: 240 GSYIVERLLEVRDIPMATIVLDLLACKTEMLIRLARSENGNFVVCKLLELTNDILTADLF 299
Query: 377 --LIETMRPNSLHLHQRLVTKLQQNLDSLR 404
L+ +RP LH+ +K+ L S+R
Sbjct: 300 YSLVNKLRPYRFLLHRFPESKIVAILGSMR 329
>sp|Q80U58|PUM2_MOUSE Pumilio homolog 2 OS=Mus musculus GN=Pum2 PE=1 SV=2
Length = 1066
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 160/330 (48%), Gaps = 16/330 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL VFN + + +Q++ + + +V KF E + D
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++++++ ++ ++K L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 847
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 848 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI 905
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG + LS K S VV+ C
Sbjct: 906 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKC 965
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 966 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQK-MIDMAEPAQRKI---IM 1021
Query: 394 TKLQQNLDSLR-FGYGKHVYNFIKDCDLQN 422
K++ ++ +LR + YGKH+ ++ L+N
Sbjct: 1022 HKIRPHITTLRKYTYGKHILAKLEKYYLKN 1051
>sp|P25339|PUF4_YEAST Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PUF4 PE=1 SV=2
Length = 888
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
L +D+ G ++LQ++L S+ D +F ++T +++ + + ++ K +E +Q
Sbjct: 571 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-- 628
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
RI L S FV+ S++ G+ +++KL++ + +V+ +L+ L G
Sbjct: 629 RIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTDE-EAQIVVDSLRPYTVQLSKDLNG 686
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +CL+++ N + FI+ A + C+ +A H GC + +D + +
Sbjct: 687 NHVIQKCLQRLKPENFQ--FIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDK 744
Query: 283 ISVNAASLSRNFSGNYVVQHVLELE---DPY-LIETICFSLRGHYIDLSLTKCGSFVVQN 338
+ L+ + GNYVVQ+++ E + Y I L+ I+LS+ K GS V++
Sbjct: 745 LLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEK 804
Query: 339 CLKYRITVNYIVEEFLLNSDQ--IFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
LK I ++ E L N + I + D YGNYV+QTAL + + N +L++RL
Sbjct: 805 ILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQND-YLYKRL 859
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 22/226 (9%)
Query: 175 FVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIY 234
F+Q +D GS + D + + K LM G+ ++ + LE++
Sbjct: 580 FLQKQLDILGSKAA--------------DAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 625
Query: 235 HHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILY-LISVNAASLSRN 293
+ + + + H + ++ + G + I+ +K QI+ + LS++
Sbjct: 626 --TEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKD 683
Query: 294 FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT--VNYIVE 351
+GN+V+Q L+ P + I ++ ID++ + G V+Q CL + T + + +
Sbjct: 684 LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCD 743
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ L D ++ D +GNYV+Q + + N ++V L+
Sbjct: 744 KLLALVD---KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLK 786
>sp|Q9FIE9|PUM16_ARATH Putative pumilio homolog 16 OS=Arabidopsis thaliana GN=APUM16 PE=3
SV=2
Length = 332
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 8/247 (3%)
Query: 153 IETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRL 212
I + L+ + +TS F+ + +K GS +++KLM + +A+ RL
Sbjct: 65 ISVLDTGTLMWMASLMTSDCDYFMVITTNKNGSKTLQKLMGMSDDMDVFF---FEAIMRL 121
Query: 213 FRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
F +M K S V +Q + +K + +Y L + +LA + GCI +N I ++
Sbjct: 122 FIHVMTDKYASYVTIQGMR--VFQQDKRELMYDQILRYACFLAGDQYGCIALNEIITDLD 179
Query: 273 GPR-RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
P R Q+L +++ NA LS + GN+VVQHVL+L D I L G+ ++LS K
Sbjct: 180 DPYYRDQLLDIVANNALLLSNDAYGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKY 239
Query: 332 GSFVVQNCLKY-RITVNYIVEEFLL-NSDQIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
GS++V+ L+ + + +V + L ++ + R+A +YGN+V+ AL T + L
Sbjct: 240 GSYIVERLLEAGDVPMATVVLDLLACKTEMLIRLARSEYGNFVVCKALELTNEILTADLF 299
Query: 390 QRLVTKL 396
LV +L
Sbjct: 300 YGLVNRL 306
>sp|Q4PSD1|PUM14_ARATH Pumilio homolog 14 OS=Arabidopsis thaliana GN=APUM14 PE=2 SV=1
Length = 518
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 136/283 (48%), Gaps = 19/283 (6%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
A+D++ S+ L + G +D ++N + +++ + Y V + C+ +Q++
Sbjct: 208 FAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQIV 267
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANR-----PPLLDLVMKALKRLFRLLM 217
++ +T Q FV +D G+++I+ L+ + R P ++D+V +L +
Sbjct: 268 QLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVDVVRTVALQLSK--- 324
Query: 218 MTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR-- 275
+ V+L C H + + +++C +A + GC + ++ + P
Sbjct: 325 -SNHAIFVILACFRLFPLHCR---LLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLE 380
Query: 276 -RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
R++++ NA L N GNYVVQ+++EL + YLI+ + L G+Y L+ K GS
Sbjct: 381 IRQRLIMEAIANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSH 440
Query: 335 VVQNCLKYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA 376
VQ LK R I IV + L D + D +GNYVIQTA
Sbjct: 441 AVQKLLKLRWIDSRVIVIDLLREIDTLL---LDPFGNYVIQTA 480
>sp|Q80U78|PUM1_MOUSE Pumilio homolog 1 OS=Mus musculus GN=Pum1 PE=1 SV=2
Length = 1189
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL + VFN + + +Q++ + + +V KF E + +
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 913
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + +++ +++ L +
Sbjct: 914 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 970
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 971 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1028
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1029 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1088
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1089 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1144
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1145 HKIRPHIATLRKYTYGKHI 1163
>sp|Q92359|YDHE_SCHPO Pumilio domain-containing protein C6G9.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC6G9.14 PE=4 SV=1
Length = 681
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 138/285 (48%), Gaps = 13/285 (4%)
Query: 97 NSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETC 156
NS IL +D+ G +YLQ L + +D VF + ++ + + ++ K E
Sbjct: 345 NSNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHA 404
Query: 157 NEDQLLRIT-LQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRL 215
+E Q R T +QI + V S + G+ +++K++ V++ P + ++ AL+ L
Sbjct: 405 SEAQ--RSTFIQIIAPK--LVPISFNMHGTRALQKIIDLVSS-PDQISCIVNALRPNVVL 459
Query: 216 LMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR 275
L G+ V+ +CL + + + FI+ A E L ++ H GC + D +
Sbjct: 460 LTKDLNGNHVIQKCLNKFSQEDCQ--FIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQ 517
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+Q++ I +A +L ++ GNYV+Q+VLEL +P E I LS K S V
Sbjct: 518 IEQLVEHIVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNV 577
Query: 336 VQNCLKY---RITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ C+ + I I E L++ + ++ D + NYVIQTAL
Sbjct: 578 MEKCIFFAPAAIKEKLISE--LMDEKHLPKLLRDSFANYVIQTAL 620
>sp|P25822|PUM_DROME Maternal protein pumilio OS=Drosophila melanogaster GN=pum PE=1 SV=2
Length = 1533
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q+KL + VF+ + + ++ + + +V KF E +
Sbjct: 1116 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPE 1175
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + +Q+ +Q ++ +G I+K +++++ P ++ L +
Sbjct: 1176 QKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKCVKD 1230
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + FI A L+ H GC + ++ + I
Sbjct: 1231 QNGNHVVQKCIECV--DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 1288
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE + S+RG + LS K S VV+ C
Sbjct: 1289 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1348
Query: 340 LKY--RITVNYIVEEFLLNSDQIFRVAC-DKYGNYVIQTALIETMRPNSLHLHQRLVTKL 396
+ + R +++E +D V D+Y NYV+Q +I+ P L ++L+TK+
Sbjct: 1349 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKI 1404
Query: 397 QQNLDSLR-FGYGKHV 411
+ ++ +LR + YGKH+
Sbjct: 1405 RPHMAALRKYTYGKHI 1420
>sp|Q2VB19|PUM1_CHICK Pumilio homolog 1 OS=Gallus gallus GN=PUM1 PE=2 SV=1
Length = 1189
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 16/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 913
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + +++ +++ L +
Sbjct: 914 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKD 970
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 971 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPI 1028
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1029 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1088
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1089 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPAQRKI---VM 1144
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1145 HKIRPHIATLRKYTYGKHI 1163
>sp|Q9XI17|PUM20_ARATH Putative pumilio homolog 20 OS=Arabidopsis thaliana GN=APUM20 PE=5
SV=2
Length = 332
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 133/267 (49%), Gaps = 10/267 (3%)
Query: 151 KFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALK 210
+ I ++ +L + +TS F+ + + GS I+KL+ + L A+
Sbjct: 70 QMISKLDQRKLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTDDVDALF---AAAIL 126
Query: 211 RLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDE 270
R F ++ K S VV + + K +Y+ L + ++A + G + +N+ I +
Sbjct: 127 RRFLHIITDKYASYVVRRGMTVF--DKKKKKAMYEHILHYASHIARDKHGNLALNDIITD 184
Query: 271 MKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTK 330
R ++ +I+ A LS + GN+V+Q VL+L D I SLRGH++DLS K
Sbjct: 185 ---AYRNKLFDVIAHKALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQK 241
Query: 331 CGSFVVQNCLKYRITVNYIVEEFL-LNSDQIFRVACDKYGNYVIQTALIETMRPN-SLHL 388
GS+VV L+ + ++ +VEE + D + R+A ++YGN+++ AL T + L
Sbjct: 242 YGSYVVDVLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKEMVRTDL 301
Query: 389 HQRLVTKLQQNLDSLRFGYGKHVYNFI 415
LV KL+ + LR+ GK++ + +
Sbjct: 302 FWGLVHKLKPFHNLLRWSRGKNIASIL 328
>sp|Q9C5E7|PUM6_ARATH Pumilio homolog 6, chloroplastic OS=Arabidopsis thaliana GN=APUM6
PE=1 SV=1
Length = 861
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 155/335 (46%), Gaps = 30/335 (8%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ + D+ GS+++Q+KL + VF + +++ + + +V KF E N
Sbjct: 537 IVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNST 596
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q + Q+ Q V S+ +G I+K + + P + + L +
Sbjct: 597 QRKELADQLMGQ---IVPLSLQMYGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRD 651
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR--- 276
+ G+ V+ +C+E I +K F+ A L+ H GC + ++ +
Sbjct: 652 QNGNHVIQKCIENI--PADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRF 709
Query: 277 --KQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
++IL + V LS++ GNYV QHVLE E I L GH + LSL K S
Sbjct: 710 ITEEILESVCV----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASN 765
Query: 335 VVQNCLKY--RITVNYIVEEFLLNSD---QIFRVACDKYGNYVIQTALIETMRPNSLHLH 389
V++ CL+Y R+ + I++E + + + D+YGNYV+Q + ET +
Sbjct: 766 VIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQK-IFETCTAD----- 819
Query: 390 QRLV--TKLQQNLDSL-RFGYGKHVYNFIKDCDLQ 421
QRL ++++ + +L ++ YGKH+ + ++ ++
Sbjct: 820 QRLTLFSRVRMHASALKKYTYGKHIVSRLEQPSIE 854
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H + + + G + ++ K + + I +A L + GNYV+Q E +
Sbjct: 536 HIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNS 595
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ + L G + LSL G V+Q L I + V Q+ R D+ G
Sbjct: 596 TQRKELADQLMGQIVPLSLQMYGCRVIQKALDV-IEPDQRVRLARELDGQVMRCVRDQNG 654
Query: 370 NYVIQTAL 377
N+VIQ +
Sbjct: 655 NHVIQKCI 662
>sp|Q9FMH4|PUM13_ARATH Putative pumilio homolog 13 OS=Arabidopsis thaliana GN=APUM13 PE=3
SV=1
Length = 527
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 10/279 (3%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+A D S+ L++ + G +D +F+ + +++ + + V I C+ +Q++
Sbjct: 216 IATDRVWSKELEKTIFVGTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCSSEQII 275
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPP-LLDLVMKALKRLFRLLMMTKP 221
I +T FV + G+ +I+ L+ ++ R + +M A+ + L
Sbjct: 276 LIVDVVTRHISKFVNICFNPIGTLAIQVLLTSIHERANNQIPRIMDAISSVALQLTRNTN 335
Query: 222 GSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPR---RKQ 278
V+L C + + + +HC +A + GC + D+ + P R++
Sbjct: 336 AKYVILACFRMFTSSQCRR--LLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQR 393
Query: 279 ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQN 338
++ + +A L N GNYVVQ+V+EL++ + + + L +Y L+ K GS VVQ
Sbjct: 394 LISEVIEHALKLCLNCHGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQK 453
Query: 339 CLKYR-ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTA 376
LK R I IV + L D + D +GNYVIQTA
Sbjct: 454 LLKLRGIDSKLIVVDLLRGIDTLL---LDPFGNYVIQTA 489
>sp|Q5R5X3|PUM1_PONAB Pumilio homolog 1 OS=Pongo abelii GN=PUM1 PE=2 SV=1
Length = 1186
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 967
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 968 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1025
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1026 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1086 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1141
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1142 HKIRPHIATLRKYTYGKHI 1160
>sp|Q14671|PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens GN=PUM1 PE=1 SV=3
Length = 1186
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
I+ +QD+ GS+++Q KL VFN + + +Q++ + + +V KF E + +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMT 219
Q L + +I + ++ +G I+K ++ + + + +++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSD--QQNEMVRELDGHVLKCVKD 967
Query: 220 KPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQI 279
+ G+ VV +C+E + + + FI A L+ H GC + ++ + I
Sbjct: 968 QNGNHVVQKCIECVQPQSLQ--FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPI 1025
Query: 280 LYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNC 339
L + + L ++ GNYV+QHVLE P I +RG+ + LS K S VV+ C
Sbjct: 1026 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 340 LKY--RITVNYIVEEFLLNSD----QIFRVACDKYGNYVIQTALIETMRPNSLHLHQRLV 393
+ + R +++E +D ++ + D+Y NYV+Q +I+ P + ++
Sbjct: 1086 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQK-MIDVAEPGQRKI---VM 1141
Query: 394 TKLQQNLDSLR-FGYGKHV 411
K++ ++ +LR + YGKH+
Sbjct: 1142 HKIRPHIATLRKYTYGKHI 1160
>sp|Q9SS47|PUM4_ARATH Pumilio homolog 4 OS=Arabidopsis thaliana GN=APUM4 PE=1 SV=2
Length = 1003
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 156/322 (48%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + +F + + ++ + + +V KF E
Sbjct: 669 VIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTK 728
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + Q+T + S+ +G I+K ++ V L+ + +K L +M
Sbjct: 729 QRKELAEQVTGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARMVKELDGSVMKC 780
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRR 276
+ G+ V+ +C+E++ + FI + L L+ H GC + ++ +
Sbjct: 781 VHDQNGNHVIQKCIERLPQ--DWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIET 838
Query: 277 KQILYL-ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
++I+ I + +L+++ GNYV+QH+++ P+ I L G + +S K S V
Sbjct: 839 QRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNV 898
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D +GNYV+Q L ET SL L
Sbjct: 899 VEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCDDQSLAL-- 955
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++++++ +L++L R+ YGKH+
Sbjct: 956 -ILSRIKVHLNALKRYTYGKHI 976
>sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis thaliana GN=APUM5 PE=1 SV=2
Length = 961
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 150/326 (46%), Gaps = 32/326 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL VF+ V +++ + + +V KFIE
Sbjct: 633 VVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPA 692
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL--- 216
Q + Q+ Q V S+ +G I+K ++ ++D+ K L R L
Sbjct: 693 QREELVKQLAGQ---MVSLSLQMYGCRVIQKALE-------VIDVDQKT--ELIRELDGN 740
Query: 217 ----MMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMK 272
+ + G+ V+ +C+E + + F+ A L+ H GC + ++
Sbjct: 741 VLKCVRDQNGNHVIQKCIESM--PAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCS 798
Query: 273 GPRRKQ-ILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKC 331
I+ I +A +L+ + GNYV QHVLE P I L G+ + +S K
Sbjct: 799 DDEETHCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKY 858
Query: 332 GSFVVQNCLKYRITV--NYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSL 386
S VV+ CL++ + +++EE + S++ + + D++ NYV+Q L E +
Sbjct: 859 ASNVVEKCLEHADSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVL-EISKDQQR 917
Query: 387 HLHQRLVTKLQQNLDSLR-FGYGKHV 411
+ LV +++ +L SLR + YGKH+
Sbjct: 918 EI---LVQRMKIHLQSLRKYTYGKHI 940
>sp|Q9ZW06|PUM2_ARATH Pumilio homolog 2 OS=Arabidopsis thaliana GN=APUM2 PE=1 SV=1
Length = 972
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 154/325 (47%), Gaps = 30/325 (9%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + S + V+ + ++ + + +V KF E
Sbjct: 639 VVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPP 698
Query: 160 QLLRITLQITSQDQLF---VQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLL 216
Q + D+LF + S+ +G I+K ++ V LD +K +K L +
Sbjct: 699 QRRELA------DKLFDNVLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHV 747
Query: 217 MM---TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKG 273
M + G+ VV +C+E + N +FI + + L+ H GC + ++
Sbjct: 748 MRCVRDQNGNHVVQKCIECVPEENI--EFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHD 805
Query: 274 P-RRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCG 332
P + +++ I + L+++ GNYV+QHVLE P I L G + +S K
Sbjct: 806 PDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFA 865
Query: 333 SFVVQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLH 387
S VV+ CL + ++V E L +D+ + + D++ NYV+Q L ET
Sbjct: 866 SNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQRE 924
Query: 388 LHQRLVTKLQQNLDSL-RFGYGKHV 411
L ++ +++ +L++L ++ YGKH+
Sbjct: 925 L---ILGRIKVHLNALKKYTYGKHI 946
>sp|Q9ZW07|PUM1_ARATH Pumilio homolog 1 OS=Arabidopsis thaliana GN=APUM1 PE=1 SV=1
Length = 968
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 153/327 (46%), Gaps = 24/327 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 635 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLPP 694
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD +K +K L +M
Sbjct: 695 QRRELAEKLFDH---VLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 746
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-R 275
+ G+ VV +C+E + N +FI H + L+ H GC + ++ P
Sbjct: 747 VRDQNGNHVVQKCIECVPEENI--EFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDT 804
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + L+++ GNYVVQHVLE P I L G + +S K S V
Sbjct: 805 QSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 864
Query: 336 VQNCLKYRI--TVNYIVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 865 VEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 921
Query: 391 RLVTKLQQNLDSL-RFGYGKHVYNFIK 416
++T+++ +L +L ++ YGKHV I+
Sbjct: 922 -ILTRIKVHLTALKKYTYGKHVVARIE 947
>sp|Q9ZW02|PUM3_ARATH Pumilio homolog 3 OS=Arabidopsis thaliana GN=APUM3 PE=1 SV=1
Length = 964
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 152/322 (47%), Gaps = 24/322 (7%)
Query: 100 ILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNED 159
++ + D+ GS+++Q+KL + + + V+ + ++ + + +V KF E
Sbjct: 631 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKFFEHGLPP 690
Query: 160 QLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMM- 218
Q + ++ + S+ +G I+K ++ V LD ++ +K L +M
Sbjct: 691 QRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEVVD-----LDQKIQMVKELDGHVMRC 742
Query: 219 --TKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGP-R 275
+ G+ VV +C+E + N +FI H + L+ H GC + ++ P
Sbjct: 743 VRDQNGNHVVQKCIECVPEENI--EFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDT 800
Query: 276 RKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFV 335
+ +++ I + L+++ GNYVVQHVLE P I L G + +S K S V
Sbjct: 801 QSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 860
Query: 336 VQNCLKYRITVNY--IVEEFLLNSDQ---IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
V+ CL + +V E L +D+ + + D++ NYV+Q L ET L
Sbjct: 861 VEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQREL-- 917
Query: 391 RLVTKLQQNLDSL-RFGYGKHV 411
++T+++ +L++L ++ YGKH+
Sbjct: 918 -ILTRIKVHLNALKKYTYGKHI 938
>sp|O94462|PUF3_SCHPO mRNA-binding protein puf3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=puf3 PE=2 SV=4
Length = 732
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 151/341 (44%), Gaps = 32/341 (9%)
Query: 87 FQANPFQHCANSGIL----LLAQDEQGSQYLQEKLTSGDSRFLDKVF-NVVSEFTFQIIC 141
F AN +H S IL L + D+ GS+++Q+KL + + VF + S Q++
Sbjct: 384 FHANKQRHFELSDILGNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTSCLQLMM 443
Query: 142 NQYARFVFGKFIETCNEDQLLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPL 201
+ + +V K+ E NE Q + QI S+ +G ++K ++ ++ P
Sbjct: 444 DIFGNYVVQKYFEFGNEKQKQILLSQIKGH---VFSLSLQMYGCRVVQKAIEYIS--PEH 498
Query: 202 LDLVMKALKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGC 261
+++ L + + G+ V+ + +E I FI +A L+ H GC
Sbjct: 499 QVQLIQELDGHVLDCVCDQNGNHVIQKAIECI--DTGHLQFILRALRPQIHVLSAHPYGC 556
Query: 262 INMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVL----ELEDPYLIETICF 317
+ I+ RK I+ + + L+++ GNYVVQH+L E + Y+ + +
Sbjct: 557 RVIQRAIEHCHS-ERKLIIEELLPHILKLTQDQYGNYVVQHILRTGSESDKKYIFDLMI- 614
Query: 318 SLRGHYIDLSLTKCGSFVVQNCLKY------RITVNYIVEEFLLNSDQIFRVACDKYGNY 371
H + LS K S VV+ C+ Y R +N I+ E N + + DKY NY
Sbjct: 615 ---DHLLFLSCHKFASNVVERCISYISDVDRRRILNKIISEKAENCSILMLMMKDKYANY 671
Query: 372 VIQTALIETMRPNSLHLHQRLVTKLQQNLDSL-RFGYGKHV 411
VIQ L + L++ + ++ L +F YGKH+
Sbjct: 672 VIQKLLDASPEEE----RDLLISYIYPHISVLKKFTYGKHL 708
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Query: 233 IYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLI-SVNAASLS 291
++H N + F L + + + + G + + R+ + I S + L
Sbjct: 383 LFHANKQRHFELSDILGNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTSCLQLM 442
Query: 292 RNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVE 351
+ GNYVVQ E + + + ++GH LSL G VVQ ++Y I+ + V+
Sbjct: 443 MDIFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEY-ISPEHQVQ 501
Query: 352 EFLLNSDQIFRVACDKYGNYVIQTAL 377
+ CD+ GN+VIQ A+
Sbjct: 502 LIQELDGHVLDCVCDQNGNHVIQKAI 527
>sp|Q09829|YAD3_SCHPO Pumilio domain-containing protein C4G8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC4G8.03c PE=4 SV=1
Length = 780
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 127/277 (45%), Gaps = 9/277 (3%)
Query: 103 LAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLL 162
+ +D+ G +YLQ+ L F + + Q++ + + ++ K + +Q L
Sbjct: 470 ICKDQYGCRYLQKLLDENPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVYASREQKL 529
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPG 222
+ I + V + +G+ S++ ++ + + + L++K + L G
Sbjct: 530 SMLNGI---GEGIVDICSNLYGTRSMQNIIDKLTSNEQI-SLLLKIIIPSLTTLACDNNG 585
Query: 223 SSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYL 282
+ V+ +C+ + K + ++ + E+ + LA + GC + +D G +++++
Sbjct: 586 THVLQKCIAKFPPE--KLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGDIQERLVNS 643
Query: 283 ISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKY 342
I + L +N GNY+VQHVLEL E I G+ LSL K S ++ C++
Sbjct: 644 IIKSCLLLVQNAYGNYLVQHVLELNIQPYTERIIEKFFGNICKLSLQKFSSNAIEQCIRT 703
Query: 343 R--ITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
T +++EF L+ I ++ D Y NYV+Q L
Sbjct: 704 ASPSTREQMLQEF-LSFPNIEQLLDDCYANYVMQRFL 739
>sp|P39016|MPT5_YEAST Suppressor protein MPT5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MPT5 PE=1 SV=2
Length = 859
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 159/363 (43%), Gaps = 60/363 (16%)
Query: 103 LAQDEQGSQYLQEKL-TSGDSRFL-DKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
LA D+ G ++LQ+KL T +S + D ++ + F +I + + ++ K + +Q
Sbjct: 218 LATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTAEQ 277
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFR------ 214
TL I + Q S++++G+ S++K++ V N + DL++K + F
Sbjct: 278 K---TLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQI-DLIIKGFSQEFTSIEQVV 333
Query: 215 LLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALE--HCLYLACHEQGCINMNNFIDEMK 272
L+ G+ V+ +C+ + +K FI A +E + + ++ H+ GC + ++
Sbjct: 334 TLINDLNGNHVIQKCIFKFSP--SKFGFIIDAIVEQNNIITISTHKHGCC----VLQKLL 387
Query: 273 GPRRKQILYLISVNAA----SLSRNFSGNYVVQHVLELE--DPYLIETICFSLRGHYIDL 326
Q ++ ISV L + GNY++Q +L+++ D YL+ + L L
Sbjct: 388 SVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQL 447
Query: 327 SLTKCGSFVVQNCLK--YRITVNYIVEE---------------------FLLNSDQIFRV 363
S K S VV+ +K +RI +IV LL + IF V
Sbjct: 448 SCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTV 507
Query: 364 AC-----DKYGNYVIQTALIETMRPNSLHLHQRLVTKLQQNLDSLRFGYGKHVYNFIKDC 418
D +GNY +QT L++ + L + + + QN S YG NF D
Sbjct: 508 NLNVLIRDNFGNYALQT-LLDVKNYSPLLAYNKNSNAIGQN-SSSTLNYG----NFCNDF 561
Query: 419 DLQ 421
L+
Sbjct: 562 SLK 564
>sp|Q9LNI2|PUM22_ARATH Putative pumilio homolog 22 OS=Arabidopsis thaliana GN=APUM22 PE=3
SV=1
Length = 361
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Query: 278 QILYLISVNAASLSRN-FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
QIL LI V+A L+++ GN QH + L I L+ HYI+LS K GS +V
Sbjct: 203 QILRLIGVHALYLTKDPDMGNKTFQHAINLHHQDCTTFIACGLQSHYIELSFLKHGSKIV 262
Query: 337 QNCLKYRIT----VNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETMRPNSLHLHQRL 392
+ + RI+ V ++E + D + R+A D+YGN +++ L + + L
Sbjct: 263 EMLIDDRISMVPLVLLMMEIVKCDEDTLVRLATDEYGNNILKKFL-ALAKEHKEDFFGDL 321
Query: 393 VTKLQQNLDSLRFGYGKHVYNFI 415
V KL LDSLR G+++ I
Sbjct: 322 VDKLNPLLDSLRGTLGENIVAII 344
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 250 HCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELEDP 309
H L L+ + GC+ + I + + L LI+ +A SLS + G ++QHVLEL+
Sbjct: 32 HLLVLSSDDNGCVILKKVITIADDFLKDEFLDLIAQHAHSLSMHDLGISLIQHVLELD-- 89
Query: 310 YLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYG 369
+ +T R H + + S V + ++ + + +L+SD F + G
Sbjct: 90 FTKKTTQDDKRLHELMAEFDEVLSTSVTADVD---KLHKLASKLMLDSDLFFEFVITRRG 146
Query: 370 NYVIQTAL 377
+ +IQ L
Sbjct: 147 SLMIQIIL 154
>sp|Q10238|MPF1_SCHPO Meiotic PUF family protein 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mpf1 PE=4 SV=1
Length = 581
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 161/380 (42%), Gaps = 37/380 (9%)
Query: 58 GRSTVPNL-----SGTSNPQYETITSSNFQTPLGFQANPFQHCANSGILLLAQDEQGSQY 112
G ST NL +GT+ P +E + + + L + A + A ++ D+ S
Sbjct: 214 GESTNKNLFYEFPNGTTEP-FEKNSVHSGKETLQYSATISKWKAMIEQIIFQNDQAASLS 272
Query: 113 LQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQD 172
LQ++L + D + N + F+ ++ N++ F+ K E E QL + +
Sbjct: 273 LQQQLKNEDIEDNINLINTILPFSVTLMKNKFGNFLIQKCFEYSTEAQLQSFSYFLKKHV 332
Query: 173 QLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQ 232
+ + S+D FGS ++K ++ R + +++ L +M + V + E
Sbjct: 333 K---ELSIDAFGSHVLQKSLEIYPER--FTNNLIEELIECLPATLMQRHSCHVWQKFFET 387
Query: 233 --------IYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS 284
I+ H NK L ++ E G + + + K ++ L I
Sbjct: 388 RRKSLVDGIFDHFNK------KMQGKWLQVSVSEMGSLVVQTIFENCKEKDKRTCLDEII 441
Query: 285 VNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLK--Y 342
N + GN+V+QH++E + I SL S + S VV+ L+ +
Sbjct: 442 NNMDQIICGQWGNWVIQHIIEHGSEPDKQRILNSLLKEVESYSTNRYASKVVERALRVCH 501
Query: 343 RITVNYIVEEFLLNSDQ---IF--RVACDKYGNYVIQTALIETMRPNSLHLHQRLVTKLQ 397
+ V+E ++ IF +A ++YGNY++Q L++ P+ ++L + L+
Sbjct: 502 VTFFDRYVKEITTPQNELPTIFLQEIASNQYGNYIVQ-YLLQVATPSQINL---MAEHLK 557
Query: 398 QNLDSLR-FGYGKHVYNFIK 416
+++ SLR YG+ + ++
Sbjct: 558 KHMVSLRGHKYGQRIAALVE 577
>sp|O74438|MCP2_SCHPO Meiotic coiled-coil protein 2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mcp2 PE=4 SV=1
Length = 703
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 167/392 (42%), Gaps = 42/392 (10%)
Query: 48 QSTWAVPSLSGRSTVPNLSGTSNP--QYETITSSNFQTPLGFQANPFQHCANSGILLLAQ 105
QS W + S S +P + + P +Y I+ N + ++++
Sbjct: 321 QSIWETMNNSNPSVIPESTSSREPAARYRKISERNAVYDWNVIIDK---------IIVSN 371
Query: 106 DEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQI---ICNQYARFVFGKFIETCNEDQLL 162
D+Q S +LQ+KL D N+V QI + N++ F+ + E Q+
Sbjct: 372 DQQSSIFLQQKLKISS---YDMKQNIVDSIISQIHPLMLNRFGNFLVQRCFEHGTAPQIR 428
Query: 163 RITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLF---RLLMMT 219
++ + ++ + D FG ++K + V D+ + + LF + +M
Sbjct: 429 QMGSAMLGN---MLKLATDPFGCHVVQKAIDNVTE-----DIKLAMMDELFLTIDVTIMH 480
Query: 220 KPGSSVVLQCLE-QIYHHN-NKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRK 277
V + E Q Y + N + + A +A E G + + N + ++
Sbjct: 481 HYACHVWQKLFETQWYEYPVNVMNRVNNALRGKWHEVAVGENGSLVVQNMFENCVEKDKR 540
Query: 278 QILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQ 337
+ + I + ++R GN+VVQH++E ++ + +L ++ S+ + S V++
Sbjct: 541 ECIEEIIFHLDGIARGQWGNWVVQHMVENGQGEDLKRVIDALLNRAVEFSIDQFASKVIE 600
Query: 338 NCLK------YRITVNYIVEEFLLNSDQ-IFRVACDKYGNYVIQTALIETMRPNSLHLHQ 390
+K + + I + + Q + +A D+YGNY+IQ +I+ +P +L
Sbjct: 601 KAIKSGPKNFISLYLKQITNARVDRTRQPLIDIASDQYGNYLIQ-QIIQLGQPAEKNL-- 657
Query: 391 RLVTKLQQNLDSLRFG-YGKHVYNFIKDCDLQ 421
++T +++++ SLR YG+ V ++ + Q
Sbjct: 658 -VITHIKKHMVSLRGSKYGQKVAYLVEKWNSQ 688
>sp|Q07807|PUF3_YEAST mRNA-binding protein PUF3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF3 PE=1 SV=1
Length = 879
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 275 RRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
++ I I +A LS + GNYV+Q E T+ +G+ LSL
Sbjct: 567 EKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACR 626
Query: 335 VVQNCLKYRITVNYIVEEFLLNSDQIFRVACDKYGNYVIQTALIETM 381
V+Q L+Y I N +E L SD + ++ D+ GN+VIQ A IET+
Sbjct: 627 VIQKALEY-IDSNQRIELVLELSDSVLQMIKDQNGNHVIQKA-IETI 671
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 133/293 (45%), Gaps = 27/293 (9%)
Query: 101 LLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQ 160
L +D+ GS+++Q +L + + + +FN + + ++ + + +V KF E ++ Q
Sbjct: 544 LEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQ 603
Query: 161 LLRITLQITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTK 220
+ Q Q S+ + I+K ++ + + ++LV++ + +++ +
Sbjct: 604 KNTLVDQFKGN---MKQLSLQMYACRVIQKALEYIDSNQ-RIELVLELSDSVLQMIK-DQ 658
Query: 221 PGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQIL 280
G+ V+ + +E I K FI + H +L+ H GC + ++ ++ IL
Sbjct: 659 NGNHVIQKAIETIPIE--KLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESIL 716
Query: 281 YLISVNAASLSRNFSGNYVVQHVLELEDPY-------LIETICFSLRGHYIDLSLTKCGS 333
+ L ++ GNYV+Q+VL+ +D + + + I ++ + ++ S K S
Sbjct: 717 NELKDFIPYLIQDQYGNYVIQYVLQ-QDQFTNKEMVDIKQEIIETVANNVVEYSKHKFAS 775
Query: 334 FVVQNCLKY--RITVNYIVEEFL---------LNSDQ-IFRVACDKYGNYVIQ 374
VV+ + Y + + I+ + L L D + + D++ NYVIQ
Sbjct: 776 NVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQ 828
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 275 RRKQILYLISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSF 334
+R +++ +S + + ++ +GN+V+Q +E + I SL GH LS G
Sbjct: 639 QRIELVLELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCR 698
Query: 335 VVQNCLKYRITVNYIVEEFLLN--SDQIFRVACDKYGNYVIQTALIETMRPNS--LHLHQ 390
V+Q L++ + + +E +LN D I + D+YGNYVIQ L + N + + Q
Sbjct: 699 VIQRLLEFGSSED---QESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQ 755
Query: 391 RLVTKLQQNLDSLRFGYGKHVY 412
++ + N+ Y KH +
Sbjct: 756 EIIETVANNV----VEYSKHKF 773
>sp|Q9P789|YN8E_SCHPO Pumilio domain-containing protein P35G2.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP35G2.14 PE=1 SV=2
Length = 1065
Score = 39.3 bits (90), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 248 LEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGNYVVQHVLELE 307
L+ L+ G + D P ++ +L I+ + A + + +G + Q ++++
Sbjct: 775 LDEVSDLSSDHLGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIHKNGTWAAQKIVDVA 834
Query: 308 DPYL-IETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYIVEEFLLNSDQIFRVACD 366
+ I L+ + L + G++VVQ CLK+ +N V E +LN Q + +A
Sbjct: 835 STEAQMRLIAKHLQPYIPLLFADQFGNYVVQTCLKFGAPMNDFVFEAILN--QFWVIAQS 892
Query: 367 KYGNYVIQTAL 377
+YG+ ++ L
Sbjct: 893 RYGSRAVRACL 903
Score = 32.3 bits (72), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 25/198 (12%)
Query: 114 QEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCNEDQLLRITLQITSQDQ 173
QE++ +LD+V ++ S+ + N + +F + E L RI +
Sbjct: 764 QEEVEDIAINWLDEVSDLSSDH----LGNTVVQKLFDYCSDPVKEMMLERIAPHL----- 814
Query: 174 LFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVLQCLEQI 233
Q + K G+ + +K++ VA+ + L+ K L+ LL + G+ VV CL+
Sbjct: 815 --AQIGIHKNGTWAAQKIVD-VASTEAQMRLIAKHLQPYIPLLFADQFGNYVVQTCLK-- 869
Query: 234 YHHNNKNDFIYQAALEHCLYLACHEQG------CINMNNFIDEMKGPRRKQILYLISVNA 287
NDF+++A L +A G C+ + +E +R + I+V +
Sbjct: 870 -FGAPMNDFVFEAILNQFWVIAQSRYGSRAVRACLESPDVTEE----QRVLVAAAITVYS 924
Query: 288 ASLSRNFSGNYVVQHVLE 305
L+ N +G ++ +++E
Sbjct: 925 VHLAMNGNGTLLLTYLVE 942
>sp|O60059|YG58_SCHPO Pumilio domain-containing protein C56F2.08c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC56F2.08c PE=1
SV=1
Length = 661
Score = 35.4 bits (80), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 25/200 (12%)
Query: 112 YLQEKLTSGDSRFLDKVFNVVSEFTFQIICNQYARFVFGKFIETCN----EDQLLRITLQ 167
Y QE++ LD V + S++ V KF E C+ E L RI
Sbjct: 180 YTQEEIEVIARSMLDDVAELSSDY--------LGNTVVQKFFEYCSDPIKEAMLERIAPY 231
Query: 168 ITSQDQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVMKALKRLFRLLMMTKPGSSVVL 227
+ + + K G+ + +K++ VA+ +DL++K L+ LL + G+ V
Sbjct: 232 LAA-------IGIHKNGTWAAQKIID-VASTEKQMDLIVKHLRPYTALLYFDQFGNYVAQ 283
Query: 228 QCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFIDEMKGPRRKQILYLIS--V 285
CL Y KN F+++ HC + G + ++ +Q L + S +
Sbjct: 284 CCLRFKY---PKNTFLFEVMARHCCEIGQSRFGARAIRACLENENATFEQQALVVASIII 340
Query: 286 NAASLSRNFSGNYVVQHVLE 305
N+ L+ N +G ++ +L+
Sbjct: 341 NSHLLATNSNGMLLLTWLLD 360
>sp|Q9FGE7|PUM26_ARATH Pumilio homolog 26 OS=Arabidopsis thaliana GN=APUM26 PE=2 SV=1
Length = 187
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 278 QILYLISVNAASLSRN-FSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVV 336
IL I NA L+RN G +V+ + + DP I L HY++LS + GS +V
Sbjct: 114 DILRRIGNNALYLTRNPLRGICLVEKAINVRDPDCTVFIALKLHSHYVELSFEELGSNIV 173
Query: 337 QNCL 340
+ L
Sbjct: 174 EKLL 177
>sp|Q9UU76|PUF6_SCHPO Pumilio homology domain family member 6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=puf6 PE=1 SV=1
Length = 642
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 271 MKGPRRKQILY----LISVNAASLSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDL 326
+K RK I+ LI N L + VVQ ++ ETIC L G Y+DL
Sbjct: 146 IKAEERKTIIAELFDLIRTNVKQLVFKHDMSRVVQTCVKFGSKQQRETICAELAGSYVDL 205
Query: 327 SLTKCGSFVVQNCLKY 342
+ G ++ KY
Sbjct: 206 CKSPYGKYLAIKIFKY 221
>sp|Q58186|Y776_METJA Uncharacterized protein MJ0776 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0776 PE=4 SV=1
Length = 383
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 18/158 (11%)
Query: 148 VFGKFIETCNEDQLLRITLQITSQ-DQLFVQASVDKFGSSSIRKLMKAVANRPPLLDLVM 206
V G+ E +E++L+ I ++ + D +F+ + V +F +S I + N P ++ +
Sbjct: 66 VHGRLKENYDENKLIEIANKLADEVDCIFITSGVFEFENSKIPGWDNVIGNGPKKINEIS 125
Query: 207 KALKRLFRL--LMMTKPGSSVVLQCLEQIYHHNNKND-FIYQAALEHCLYLACHEQGC-- 261
K +L L P + + NNK + + + C+ + G
Sbjct: 126 NKYKTYKKLKNLGFNIPETKKI----------NNKTQLYKFLEEFKTCILKPIYGSGGSI 175
Query: 262 --INMNNFIDEMKGPRRKQILYLISVNAASLSRNFSGN 297
I +NNF DE+ + I+ + S S NF GN
Sbjct: 176 LKIELNNFDDEIINEIKFPIIAQEYIRGKSFSANFIGN 213
>sp|P47135|JSN1_YEAST Protein JSN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=JSN1 PE=1 SV=1
Length = 1091
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 39/88 (44%)
Query: 290 LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRITVNYI 349
LS ++ GN +VQ + E + + + + + + K G++ Q + T I
Sbjct: 625 LSSDYLGNTIVQKLFEHSSDIIKDIMLRKTSKYLTSMGVHKNGTWACQKMITMAHTPRQI 684
Query: 350 VEEFLLNSDQIFRVACDKYGNYVIQTAL 377
++ D + D++GNYVIQ L
Sbjct: 685 MQVTQGVKDYCTPLINDQFGNYVIQCVL 712
>sp|Q9M081|SC24B_ARATH Protein transport protein Sec24-like At4g32640 OS=Arabidopsis
thaliana GN=At4g32640 PE=1 SV=3
Length = 1080
Score = 32.7 bits (73), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 93 QHCANSGILLLAQDEQGSQYLQEKLTSGDSRFLDKVFNVVS--EFTFQIICNQYARFVFG 150
+H +N G+ L E G ++ E + DS L K+F V S E Q + QY +
Sbjct: 961 EHISNEGVYFLENGEDGLLFVGESV---DSDILQKLFAVSSAAEIPNQFVLQQYDNQLSK 1017
Query: 151 KFIETCNE 158
KF + NE
Sbjct: 1018 KFNDAVNE 1025
>sp|Q12221|PUF2_YEAST mRNA-binding protein PUF2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF2 PE=1 SV=1
Length = 1075
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 290 LSRNFSGNYVVQHVLELEDPYLIETICFSLRGHYIDLSLTKCGSFVVQNCLKYRIT---V 346
LS ++ GN V+Q + E + + + + + + K G++V Q +K T +
Sbjct: 584 LSSDYLGNTVIQKLFENSSNIIRDIMLRKCNKYLTSMGVHKNGTWVCQKIIKMANTPRQI 643
Query: 347 NYIVEEFLLNSDQIFRVACDKYGNYVIQTAL 377
N + SD + D++GNYVIQ L
Sbjct: 644 NLVTSGV---SDYCTPLFNDQFGNYVIQGIL 671
>sp|Q9I8S4|DCOR2_XENLA Ornithine decarboxylase 2 OS=Xenopus laevis GN=odc1-b PE=2 SV=1
Length = 456
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 55/139 (39%), Gaps = 37/139 (26%)
Query: 7 HPVSETQLNNLSLSFENLQVNDPSYSSFNEI-------------HPSPPVPLYPQSTWAV 53
H VS+ + N S S VND Y SFN + PSP PLY S W
Sbjct: 297 HSVSDDEENESSKSI-MYYVNDGVYGSFNCLVFDHAHPKPILHKKPSPDQPLYTSSLWG- 354
Query: 54 PSLSG------RSTVPNLSGTSNPQYETI------TSSNFQTPLGFQANPFQH----CAN 97
P+ G R +P L +E + SSNF GFQ +P + A
Sbjct: 355 PTCDGLDQIAERVQLPELHVGDWLLFENMGAYTIAASSNFN---GFQQSPVHYAMPRAAW 411
Query: 98 SGILLLAQDEQGSQYLQEK 116
+ LL ++G Q +EK
Sbjct: 412 KAVQLL---QRGLQQTEEK 427
>sp|Q5DID3|UROL1_MOUSE Uromodulin-like 1 OS=Mus musculus GN=Umodl1 PE=1 SV=1
Length = 1319
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 24 LQVNDPSYSSFNEIHPSPPVPLYPQSTWAVPSLSGRSTVPNLSGTS 69
LQ DP SSF PS P + P+S VP G+ TV N++ TS
Sbjct: 678 LQNEDPRSSSFPG-PPSAPTDVTPESPACVPGPIGKVTVSNVTSTS 722
>sp|B2VDY5|SYE_ERWT9 Glutamate--tRNA ligase OS=Erwinia tasmaniensis (strain DSM 17950 /
Et1/99) GN=gltX PE=3 SV=1
Length = 469
Score = 32.0 bits (71), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 209 LKRLFRLLMMTKPGSSVVLQCLEQIYHHNNKNDFIYQAALEHCLYLACHEQGCINMNNFI 268
+K+LF L +++K S+ + L+ + HH +I A E Y+A H Q I N I
Sbjct: 282 MKKLFELDVVSKSASAFNTEKLQWLNHH-----YINSLAPE---YVATHLQWHIEQEN-I 332
Query: 269 DEMKGPRRKQILYLISVNAASL 290
D GP+ Q++ L+ +L
Sbjct: 333 DTRTGPQLAQLVKLLGERCKTL 354
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,355,800
Number of Sequences: 539616
Number of extensions: 5931802
Number of successful extensions: 15754
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 15489
Number of HSP's gapped (non-prelim): 105
length of query: 422
length of database: 191,569,459
effective HSP length: 120
effective length of query: 302
effective length of database: 126,815,539
effective search space: 38298292778
effective search space used: 38298292778
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)