BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047628
(327 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225437963|ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Vitis vinifera]
gi|297744229|emb|CBI37199.3| unnamed protein product [Vitis vinifera]
Length = 399
Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust.
Identities = 262/322 (81%), Positives = 294/322 (91%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+A VFG TGFLGRYVVQQLAKMGSQVLVPFRG ED RHLKLMGDLGQIVPMK+NPR
Sbjct: 64 SGIVAVVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 123
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+N+IKA MAKANVV+NLIGREYETRNYSFE+VNH MAE++A I+KEHGGIMRFIQ+SCL
Sbjct: 124 DENSIKAVMAKANVVLNLIGREYETRNYSFEEVNHHMAEQLAMISKEHGGIMRFIQVSCL 183
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SSPSR+ KAAAEEAVLRELP ATIMRPA MIGTEDR+LN+WAQF KK+ F PL+
Sbjct: 184 GASPSSPSRMLMAKAAAEEAVLRELPEATIMRPAVMIGTEDRILNRWAQFAKKYGFLPLY 243
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+ QPVYV+DVAAA+ AALKDDGTSMGK+YELGGP+IFT+HELA +MYDTIRE+P
Sbjct: 244 GDGSTKFQPVYVIDVAAAIMAALKDDGTSMGKVYELGGPEIFTMHELAAVMYDTIREWPR 303
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+ +PREILL KVPFPLP PGLFNLD INA+TSDT+VS+NALTF DLGIV
Sbjct: 304 YVKVPFPIAKAMTLPREILLNKVPFPLPTPGLFNLDLINAFTSDTVVSENALTFDDLGIV 363
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+L+ YRKGGP+F
Sbjct: 364 PHKLKGYPIEFLLSYRKGGPQF 385
>gi|356548101|ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Glycine max]
Length = 396
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 254/322 (78%), Positives = 294/322 (91%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGIIATVFG TGFLGRYVVQQLAKMGSQVLVPFRG ED+PRHLKLMGDLGQIVPMK+NPR
Sbjct: 61 SGIIATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDLGQIVPMKYNPR 120
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D++++KA MAKANVVINLIGR+YETRNYSFE+V++ MAE++A I+KEHGGI+RFIQ+SCL
Sbjct: 121 DESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQLAKISKEHGGILRFIQVSCL 180
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SSPSR+ TK+AAEE +LRELP ATI++PA MIGTEDR+LN WA F KK+ F PLF
Sbjct: 181 GASPSSPSRMLRTKSAAEEMILRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFLPLF 240
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+IQPVYV+DVAAA+T+ LKDDGTSMGKIYELGGP+IFTVHELA++M+DTIRE+P
Sbjct: 241 GDGSTKIQPVYVIDVAAALTSLLKDDGTSMGKIYELGGPEIFTVHELADVMFDTIREWPR 300
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+A PREILL KVPFPLP P + NLD+I A T+DT+VS+NALTF DLGIV
Sbjct: 301 YVKVPFPIAKALATPREILLNKVPFPLPVPEILNLDKIQALTTDTVVSENALTFNDLGIV 360
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP+F
Sbjct: 361 PHKLKGYPIEFLISYRKGGPQF 382
>gi|224132264|ref|XP_002321296.1| predicted protein [Populus trichocarpa]
gi|222862069|gb|EEE99611.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/322 (80%), Positives = 293/322 (90%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQQLAKMGSQVLVPFRG +DDPRHLKLMGDLGQIVPMK+NPR
Sbjct: 59 SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSDDDPRHLKLMGDLGQIVPMKYNPR 118
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+N+IKA MAKANVVINLIGR+YETRNYSFE++NH MA ++A I+KEHGGIMRFIQ+SCL
Sbjct: 119 DENSIKAVMAKANVVINLIGRDYETRNYSFEELNHAMAGQLAMISKEHGGIMRFIQVSCL 178
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS+SSPSR+ KAA EEAVLRE+P AT+M+PA MIGTEDR+LN+WA F KK++F PL
Sbjct: 179 GASASSPSRLLRAKAAGEEAVLREMPEATVMKPAVMIGTEDRILNRWAHFTKKYSFLPLI 238
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+IQPVYVVD+AAA+ AALKDDGTSMGK+YELGGP+IFTVHELAELMYD IRE+P
Sbjct: 239 GDGSTKIQPVYVVDIAAAIIAALKDDGTSMGKVYELGGPEIFTVHELAELMYDVIREWPR 298
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA A PREILL KVPFPLP P +FNLDEIN+ T DT+VS+NALTF DLGIV
Sbjct: 299 YVKVPFPIAKAFATPREILLNKVPFPLPNPKMFNLDEINSLTMDTVVSENALTFSDLGIV 358
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP+F
Sbjct: 359 PHKLKGYPVEFLISYRKGGPQF 380
>gi|255645431|gb|ACU23211.1| unknown [Glycine max]
Length = 396
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 253/322 (78%), Positives = 293/322 (90%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGIIATVFG TGFLGRYVVQQLAKMGSQVLVPFRG ED+PRHLKLMGDLGQIVPMK+NPR
Sbjct: 61 SGIIATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDLGQIVPMKYNPR 120
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D++++KA MAKANVVINLIGR+YETRNYSFE+V++ MAE++A I+KEHGGI+RFIQ+SCL
Sbjct: 121 DESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQLAKISKEHGGILRFIQVSCL 180
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SSPSR+ TK+AAEE +LRELP ATI++PA MIGTEDR+LN WA F KK+ F PLF
Sbjct: 181 GASPSSPSRMLRTKSAAEEMILRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFLPLF 240
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+IQPVYV+DVAAA+T+ LKDDGTSMGKIYELGGP+IFTVHELA++M+DTIRE+P
Sbjct: 241 GDGSTKIQPVYVIDVAAALTSLLKDDGTSMGKIYELGGPEIFTVHELADVMFDTIREWPR 300
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+A PREILL KVPFPLP P + NLD+I A T+DT+VS+NALTF DLGIV
Sbjct: 301 YVKVPFPIAKALATPREILLNKVPFPLPVPEILNLDKIQALTTDTVVSENALTFNDLGIV 360
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLK YP E+LI YRKGGP+F
Sbjct: 361 PHKLKEYPIEFLISYRKGGPQF 382
>gi|217072722|gb|ACJ84721.1| unknown [Medicago truncatula]
gi|388499986|gb|AFK38059.1| unknown [Medicago truncatula]
Length = 396
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 248/322 (77%), Positives = 290/322 (90%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQQLAKMGSQVLVPFRG ED PRHLKLMGDLGQIVPMKFNPR
Sbjct: 61 SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQIVPMKFNPR 120
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D++++KA MA+ANVVINLIGR+YETRN+S+E+V++ MAE++A I+KEHGGIMRFIQ+SCL
Sbjct: 121 DESSVKAVMARANVVINLIGRDYETRNFSYEEVHYHMAEKLAKISKEHGGIMRFIQVSCL 180
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SS SR+ KAAAEEAVLRELP ATI +PA MIGTEDR+LN+WA F KK+ F PL
Sbjct: 181 GASPSSSSRMLRCKAAAEEAVLRELPEATIFKPAVMIGTEDRILNRWAHFAKKYGFIPLM 240
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G+G+T+IQPVYVVDVAAA+T ALKDDGTSMGKIYELGGP+IFTVH+LAE+MYD IRE+P
Sbjct: 241 GNGNTKIQPVYVVDVAAALTTALKDDGTSMGKIYELGGPEIFTVHQLAEIMYDVIREWPR 300
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YV VP P+AKA+A PRE+ L K+PFPLP+P +FNLD+I+AY +DT+VS+NALTF DLGIV
Sbjct: 301 YVNVPLPIAKALATPRELFLNKLPFPLPKPEMFNLDQIHAYAADTVVSENALTFNDLGIV 360
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP+F
Sbjct: 361 PHKLKGYPIEFLIQYRKGGPQF 382
>gi|118485658|gb|ABK94679.1| unknown [Populus trichocarpa]
Length = 399
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/322 (78%), Positives = 291/322 (90%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQQLAKMGSQVLVPFRG ED RHLKLMGDLGQIVPMK+NPR
Sbjct: 64 SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 123
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+N+IKA MAKANVVINLIGR++ETRNYSFE++NH M E++A I+KEHGGIMRFIQ+SCL
Sbjct: 124 DENSIKAVMAKANVVINLIGRDHETRNYSFEELNHGMTEQLAMISKEHGGIMRFIQVSCL 183
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS+SSPSR+ KAA EEAVLRE+P AT+M+PA MIGTEDR+LN+WA F KK++F PL
Sbjct: 184 GASASSPSRMLRAKAAGEEAVLREMPEATVMKPAVMIGTEDRILNRWAHFAKKYSFLPLI 243
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+IQPVYVVDVAAA+ AALKDDG+SMGK+YELGGP+IFTVHELA+LM+D IRE+P
Sbjct: 244 GDGSTKIQPVYVVDVAAAIIAALKDDGSSMGKVYELGGPEIFTVHELADLMHDVIREWPR 303
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+A PR +L+ KVPFPLP P +FNLDEINA T D++VS+NALTF DLGIV
Sbjct: 304 YVKVPFPIAKALATPRAVLINKVPFPLPAPKIFNLDEINALTIDSVVSENALTFNDLGIV 363
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP+F
Sbjct: 364 PHKLKGYPIEFLISYRKGGPQF 385
>gi|224065531|ref|XP_002301843.1| predicted protein [Populus trichocarpa]
gi|222843569|gb|EEE81116.1| predicted protein [Populus trichocarpa]
Length = 399
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/322 (78%), Positives = 291/322 (90%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQQLAKMGSQVLVPFRG ED RHLKLMGDLGQIVPMK+NPR
Sbjct: 64 SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 123
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+N+IKA MAKANVVINLIGR++ETRNYSFE++NH M E++A I+KEHGGIMRFIQ+SCL
Sbjct: 124 DENSIKAVMAKANVVINLIGRDHETRNYSFEELNHGMTEQLAMISKEHGGIMRFIQVSCL 183
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS+SSPSR+ KAA EEAVLRE+P AT+M+PA MIGTEDR+LN+WA F KK++F PL
Sbjct: 184 GASASSPSRMLRAKAAGEEAVLREMPEATVMKPAVMIGTEDRILNRWAHFAKKYSFLPLI 243
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+IQPVYVVDVAAA+ AALKDDG+SMGK+YELGGP+IFTVHELA+LM+D IRE+P
Sbjct: 244 GDGSTKIQPVYVVDVAAAIIAALKDDGSSMGKVYELGGPEIFTVHELADLMHDVIREWPR 303
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+A PR +L+ KVPFPLP P +FNLDEINA T D++VS+NALTF DLGIV
Sbjct: 304 YVKVPFPIAKALATPRAVLINKVPFPLPAPKIFNLDEINALTIDSVVSENALTFNDLGIV 363
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP+F
Sbjct: 364 PHKLKGYPIEFLISYRKGGPQF 385
>gi|388520273|gb|AFK48198.1| unknown [Lotus japonicus]
Length = 396
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 245/322 (76%), Positives = 291/322 (90%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQ LAKMGSQVLVPFRG ED RHLKLMGDLGQ+VPMK+NPR
Sbjct: 61 SGIVATVFGATGFLGRYVVQHLAKMGSQVLVPFRGSEDCHRHLKLMGDLGQVVPMKYNPR 120
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D++++KA MAKANVVINLIGR++ETRNYS+E V++ MA+++A I+KEHGGIMRFIQ+SCL
Sbjct: 121 DESSVKAVMAKANVVINLIGRDFETRNYSYEQVHYHMADQLARISKEHGGIMRFIQVSCL 180
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SSPSR+ KAAAEEA+LRELP ATI++PA MIGTEDR+LN+WA F KK++F PLF
Sbjct: 181 GASPSSPSRMLRAKAAAEEAILRELPEATILKPATMIGTEDRILNRWAHFAKKYSFLPLF 240
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+IQPVYVVDVA A+TAALKDDGTSMGK+YELGGP+++T+HELAELMY+ IRE+P
Sbjct: 241 GDGSTKIQPVYVVDVANALTAALKDDGTSMGKVYELGGPEVYTMHELAELMYEVIREWPR 300
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+A PRE+L+ K+PFPLP P +FNLD+I A T+DT+VS+NALTF DLGI
Sbjct: 301 YVKVPFPIAKALASPRELLINKLPFPLPTPNIFNLDQIRALTTDTVVSENALTFNDLGIN 360
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
P KLKGYPTE+LI YRKGGP+F
Sbjct: 361 PQKLKGYPTEFLISYRKGGPQF 382
>gi|242063496|ref|XP_002453037.1| hypothetical protein SORBIDRAFT_04g037200 [Sorghum bicolor]
gi|241932868|gb|EES06013.1| hypothetical protein SORBIDRAFT_04g037200 [Sorghum bicolor]
Length = 408
Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust.
Identities = 244/322 (75%), Positives = 285/322 (88%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRY+VQQLAKMGSQVLVPFRGCED RHLK+MGDLGQIVPMK++PR
Sbjct: 74 SGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGCEDSHRHLKIMGDLGQIVPMKYHPR 133
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++IKA MAK+NVVINLIGREYETRNYSFE+VNH MAE++A IAKEHGGIMRFIQ+SCL
Sbjct: 134 DVDSIKAVMAKSNVVINLIGREYETRNYSFEEVNHHMAEQLATIAKEHGGIMRFIQVSCL 193
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SS SR+ TKAA E+++L+E P ATIMRPA MIGTEDR+LN+WAQF K + F PL
Sbjct: 194 GASPSSESRLLRTKAAGEQSILKEFPEATIMRPATMIGTEDRILNRWAQFAKNWGFLPLV 253
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G GST+IQPVYV+DVAAA+ +LKDDGTSMGKIYELGGP+I+TVHELAELMY+TIRE+P
Sbjct: 254 GGGSTKIQPVYVIDVAAAIVNSLKDDGTSMGKIYELGGPEIYTVHELAELMYETIREWPR 313
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YV VP PVA+A+A PRE+LL KVPFPLP P +FNLD+INA+ D +VS++ALTF+DLGI+
Sbjct: 314 YVNVPLPVARAIASPREMLLNKVPFPLPTPSIFNLDQINAFAVDNLVSEDALTFEDLGIM 373
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
P KLKGYP E+L+ YRKGGP F
Sbjct: 374 PQKLKGYPVEFLVSYRKGGPSF 395
>gi|255571168|ref|XP_002526534.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus
communis]
gi|223534095|gb|EEF35812.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus
communis]
Length = 394
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/322 (80%), Positives = 294/322 (91%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQ+LAKMGSQVLVPFRG ED RHLKLMGDLGQIVPMK+NPR
Sbjct: 65 SGIVATVFGATGFLGRYVVQRLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 124
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+ +IKA MAKANVVINLIGREYETRNYSFE+VNH MAE++A IAKEHGGIMR+IQ+SCL
Sbjct: 125 DEASIKAVMAKANVVINLIGREYETRNYSFEEVNHGMAEQLAMIAKEHGGIMRYIQVSCL 184
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
G+SSSSPSR+ KAAAEEAVLRE+P AT+M+PAAMIGTEDR+LNKWA FVKK++F PLF
Sbjct: 185 GSSSSSPSRMLRAKAAAEEAVLREIPEATVMKPAAMIGTEDRILNKWAHFVKKYSFLPLF 244
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST++QPVYVVDVAAA+ AALKDDG+SMGKIYELGGP+I TVHELAE+M+D IRE+P
Sbjct: 245 GDGSTKLQPVYVVDVAAAIIAALKDDGSSMGKIYELGGPEILTVHELAEIMFDMIREWPR 304
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+A PRE+L+ KVPFPLP P +FNLDEI A T DT+VS+NALTF DLGI+
Sbjct: 305 YVKVPFPIAKAIATPREVLINKVPFPLPTPNIFNLDEIIALTMDTVVSENALTFHDLGIM 364
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP EYLI YRKGGP+F
Sbjct: 365 PHKLKGYPVEYLISYRKGGPQF 386
>gi|194703378|gb|ACF85773.1| unknown [Zea mays]
gi|238009398|gb|ACR35734.1| unknown [Zea mays]
Length = 407
Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust.
Identities = 243/322 (75%), Positives = 283/322 (87%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRY+VQQLAKMGSQVLVPFRGCED PRHLK+MGDLGQIVPMK++PR
Sbjct: 73 SGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGCEDSPRHLKIMGDLGQIVPMKYHPR 132
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++IKA MAK+NVVINLIGREYETRNYSFE+VNH M E++A IAKEHGGI+RFIQ+SCL
Sbjct: 133 DVDSIKAVMAKSNVVINLIGREYETRNYSFEEVNHHMPEQLATIAKEHGGIIRFIQVSCL 192
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SS SR+ TKAA E++V +E P ATIMRPA MIGTEDR+LN+WAQF K + F PL
Sbjct: 193 GASPSSESRMLRTKAAGEQSVFKEFPEATIMRPATMIGTEDRILNRWAQFAKNWGFLPLV 252
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G GST+IQPVYV+DVAAA+ +LKDDGTSMGKIYELGGP+I+TVHELAELMY+TIRE+P
Sbjct: 253 GGGSTKIQPVYVIDVAAAIVNSLKDDGTSMGKIYELGGPEIYTVHELAELMYETIREWPR 312
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YV VP PVA+A+A PRE+LL KVPFPLP P +FNLD+INA+ D +VS++ALTF+DL I+
Sbjct: 313 YVNVPLPVARAIASPREMLLNKVPFPLPTPSIFNLDQINAFAVDNLVSEDALTFEDLSIM 372
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
P KLKGYP EYL+ YRKGGP F
Sbjct: 373 PQKLKGYPVEYLVSYRKGGPSF 394
>gi|413939477|gb|AFW74028.1| NADH-ubiquinone oxidoreductase subunit [Zea mays]
Length = 460
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 243/322 (75%), Positives = 283/322 (87%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRY+VQQLAKMGSQVLVPFRGCED PRHLK+MGDLGQIVPMK++PR
Sbjct: 126 SGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGCEDSPRHLKIMGDLGQIVPMKYHPR 185
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++IKA MAK+NVVINLIGREYETRNYSFE+VNH M E++A IAKEHGGI+RFIQ+SCL
Sbjct: 186 DVDSIKAVMAKSNVVINLIGREYETRNYSFEEVNHHMPEQLATIAKEHGGIIRFIQVSCL 245
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SS SR+ TKAA E++V +E P ATIMRPA MIGTEDR+LN+WAQF K + F PL
Sbjct: 246 GASPSSESRMLRTKAAGEQSVFKEFPEATIMRPATMIGTEDRILNRWAQFAKNWGFLPLV 305
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G GST+IQPVYV+DVAAA+ +LKDDGTSMGKIYELGGP+I+TVHELAELMY+TIRE+P
Sbjct: 306 GGGSTKIQPVYVIDVAAAIVNSLKDDGTSMGKIYELGGPEIYTVHELAELMYETIREWPR 365
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YV VP PVA+A+A PRE+LL KVPFPLP P +FNLD+INA+ D +VS++ALTF+DL I+
Sbjct: 366 YVNVPLPVARAIASPREMLLNKVPFPLPTPSIFNLDQINAFAVDNLVSEDALTFEDLSIM 425
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
P KLKGYP EYL+ YRKGGP F
Sbjct: 426 PQKLKGYPVEYLVSYRKGGPSF 447
>gi|115449641|ref|NP_001048516.1| Os02g0816800 [Oryza sativa Japonica Group]
gi|47847737|dbj|BAD21515.1| putative NADH dehydrogenase [Oryza sativa Japonica Group]
gi|47848189|dbj|BAD22016.1| putative NADH dehydrogenase [Oryza sativa Japonica Group]
gi|113538047|dbj|BAF10430.1| Os02g0816800 [Oryza sativa Japonica Group]
Length = 408
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 245/322 (76%), Positives = 282/322 (87%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGIIATVFG TGFLGRY+VQQLAKMGSQVLVPFRG ED RHLKLMGDLGQIVPMK+NPR
Sbjct: 74 SGIIATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDCHRHLKLMGDLGQIVPMKYNPR 133
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++IKA MAK+NVVINLIGREYETRNY F++VNH MAE++A I+KEHGGIMRFIQ+S L
Sbjct: 134 DVDSIKAVMAKSNVVINLIGREYETRNYGFDEVNHHMAEQLAMISKEHGGIMRFIQVSSL 193
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS+SSPSR+ KAA EE+VL+E P ATIMRPA MIGTEDR+LN+WAQF K + F PL
Sbjct: 194 GASASSPSRMLRAKAAGEESVLKEFPEATIMRPATMIGTEDRILNRWAQFAKNWGFLPLV 253
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GST+IQPVYVVDVAAA+ +LKDDGTSMGK YELGGP+I+TVHELAELMY+TIRE+P
Sbjct: 254 DSGSTKIQPVYVVDVAAAIVNSLKDDGTSMGKTYELGGPEIYTVHELAELMYETIREWPR 313
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
Y+ VP P+A+A+A PRE+LL KVPFPLP P +FN D+INA++ DT+VSDNALTF DLGIV
Sbjct: 314 YIDVPLPIARAIASPREMLLNKVPFPLPTPSIFNKDQINAFSVDTLVSDNALTFSDLGIV 373
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+L+ YRKGGP F
Sbjct: 374 PHKLKGYPVEFLVCYRKGGPAF 395
>gi|226530543|ref|NP_001149069.1| LOC100282690 [Zea mays]
gi|195624488|gb|ACG34074.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Zea mays]
Length = 407
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 242/322 (75%), Positives = 282/322 (87%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRY+VQQLAKMGSQVLVPFRGCED PRHLK+MGDLGQIVPMK++PR
Sbjct: 73 SGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGCEDSPRHLKIMGDLGQIVPMKYHPR 132
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++IKA MAK+NVVINLIGREYETRNYSFE+VNH M E++A IAKEHGGI+RFIQ+SCL
Sbjct: 133 DVDSIKAVMAKSNVVINLIGREYETRNYSFEEVNHHMPEQLATIAKEHGGIIRFIQVSCL 192
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SS SR+ TKAA E++V +E P ATIMRPA MIGTEDR+LN+WAQF K + F PL
Sbjct: 193 GASPSSESRMLRTKAAGEQSVFKEFPEATIMRPATMIGTEDRILNRWAQFAKNWGFLPLV 252
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G GST+IQPVYV+DVAAA+ +LKDDGTSMGKIYEL GP+I+TVHELAELMY+TIRE+P
Sbjct: 253 GGGSTKIQPVYVIDVAAAIVNSLKDDGTSMGKIYELEGPEIYTVHELAELMYETIREWPR 312
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YV VP PVA+A+A PRE+LL KVPFPLP P +FNLD+INA+ D +VS++ALTF+DL I+
Sbjct: 313 YVNVPLPVARAIASPREMLLNKVPFPLPTPSIFNLDQINAFAVDNLVSEDALTFEDLSIM 372
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
P KLKGYP EYL+ YRKGGP F
Sbjct: 373 PQKLKGYPVEYLVSYRKGGPSF 394
>gi|218191814|gb|EEC74241.1| hypothetical protein OsI_09443 [Oryza sativa Indica Group]
Length = 408
Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust.
Identities = 244/322 (75%), Positives = 281/322 (87%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGIIATVFG TGFLGRY+VQQLAKMGSQVLVPFRG ED RHLKLMGDLGQIVPMK+NPR
Sbjct: 74 SGIIATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDCHRHLKLMGDLGQIVPMKYNPR 133
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++IKA MAK+NVVINLIGREYETRNY F++VNH MAE++A I+KEHGGIMRFI +S L
Sbjct: 134 DVDSIKAVMAKSNVVINLIGREYETRNYGFDEVNHHMAEQLAMISKEHGGIMRFIHVSSL 193
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS+SSPSR+ KAA EE+VL+E P ATIMRPA MIGTEDR+LN+WAQF K + F PL
Sbjct: 194 GASASSPSRMLRAKAAGEESVLKEFPEATIMRPATMIGTEDRILNRWAQFAKNWGFLPLV 253
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GST+IQPVYVVDVAAA+ +LKDDGTSMGK YELGGP+I+TVHELAELMY+TIRE+P
Sbjct: 254 DSGSTKIQPVYVVDVAAAIVNSLKDDGTSMGKTYELGGPEIYTVHELAELMYETIREWPR 313
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
Y+ VP P+A+A+A PRE+LL KVPFPLP P +FN D+INA++ DT+VSDNALTF DLGIV
Sbjct: 314 YIDVPLPIARAIASPREMLLNKVPFPLPTPSIFNKDQINAFSVDTLVSDNALTFSDLGIV 373
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+L+ YRKGGP F
Sbjct: 374 PHKLKGYPVEFLVCYRKGGPAF 395
>gi|326507730|dbj|BAJ86608.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514510|dbj|BAJ96242.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525485|dbj|BAJ88789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/322 (74%), Positives = 279/322 (86%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQQLAKMGSQVLVPFRGCED RHLKLMGDLGQIVPM +NPR
Sbjct: 75 SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGCEDSHRHLKLMGDLGQIVPMNYNPR 134
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D N+IK +AK+NVVINLIGREYETRNY FE+VNH MAE++A I+KEHGGI+RFIQ+S L
Sbjct: 135 DVNSIKTAVAKSNVVINLIGREYETRNYGFEEVNHQMAEQLAMISKEHGGIVRFIQVSAL 194
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS+SSPSR+ KAA EE+VL+E P ATIMRPA +IGTEDR+LN+WA + K + F PLF
Sbjct: 195 GASASSPSRLLRAKAAGEESVLKEFPEATIMRPATLIGTEDRILNRWAMYAKNWGFLPLF 254
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G GST+ QPVYVVDVAAA+ +LKDDGTSMGK YELGGPD++TVH+LAE+MY+TIREYP
Sbjct: 255 GGGSTKFQPVYVVDVAAAIVNSLKDDGTSMGKTYELGGPDVYTVHDLAEMMYETIREYPR 314
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YV +PFP+AKA+A PRE+LL KVPFPLP P +FNLD+I A + D +VS+NALTF DL I
Sbjct: 315 YVNLPFPIAKAMASPREMLLNKVPFPLPTPSIFNLDQIKALSVDNLVSENALTFADLEIK 374
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYPTE+L+ YRKGGP F
Sbjct: 375 PHKLKGYPTEFLVCYRKGGPSF 396
>gi|18399328|ref|NP_565469.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Arabidopsis
thaliana]
gi|75206396|sp|Q9SK66.2|NDUA9_ARATH RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; Flags: Precursor
gi|14334734|gb|AAK59545.1| putative NADH-ubiquinone oxireductase [Arabidopsis thaliana]
gi|15293277|gb|AAK93749.1| putative NADH-ubiquinone oxireductase [Arabidopsis thaliana]
gi|20197857|gb|AAD21752.2| putative NADH-ubiquinone oxireductase [Arabidopsis thaliana]
gi|49660121|gb|AAT68351.1| hypothetical protein At2g20360 [Arabidopsis thaliana]
gi|60547713|gb|AAX23820.1| hypothetical protein At2g20360 [Arabidopsis thaliana]
gi|330251903|gb|AEC06997.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Arabidopsis
thaliana]
Length = 402
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/322 (76%), Positives = 284/322 (88%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRY+VQQLAKMGSQVLVPFRG ED PRHLKLMGDLGQ+VPMKF+PR
Sbjct: 67 SGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQVVPMKFDPR 126
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+++IKA MAKANVVINLIGREYETRN+SFED NH +AE++A +AKEHGGIMR+IQ+SCL
Sbjct: 127 DEDSIKAVMAKANVVINLIGREYETRNFSFEDANHHIAEKLALVAKEHGGIMRYIQVSCL 186
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SSPSR+ KAAAEEAVL LP ATIMRPA MIGTEDR+LN W+ FVKK+ F PL
Sbjct: 187 GASVSSPSRMLRAKAAAEEAVLNALPEATIMRPATMIGTEDRILNPWSMFVKKYGFLPLI 246
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G+T+ QPVYVVDVAAA+ AALKDDG+SMGK YELGGPD+FT HELAE+MYD IRE+P
Sbjct: 247 GGGTTKFQPVYVVDVAAAIVAALKDDGSSMGKTYELGGPDVFTTHELAEIMYDMIREWPR 306
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVK+PFP+AKA+A PR+ ++ KVPFPLP P +FNLD+INA T+DT+VSDNAL FQDL +V
Sbjct: 307 YVKLPFPIAKAMAAPRDFMVNKVPFPLPSPQIFNLDQINALTTDTLVSDNALKFQDLDLV 366
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP F
Sbjct: 367 PHKLKGYPVEFLIQYRKGGPNF 388
>gi|297832628|ref|XP_002884196.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330036|gb|EFH60455.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata]
Length = 402
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/322 (76%), Positives = 284/322 (88%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRY+VQQLAKMGSQVLVPFRG ED PRHLKLMGDLGQ+VPMKF+PR
Sbjct: 67 SGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQVVPMKFDPR 126
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+++IKA MAKANVVINLIGREYETRN+SFED NH +AE++A +AKEHGGIMR+IQ+SCL
Sbjct: 127 DEDSIKAVMAKANVVINLIGREYETRNFSFEDANHHIAEKLALVAKEHGGIMRYIQVSCL 186
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS+SSPSR+ KAAAEEAVL LP AT+MRPA MIGTEDR+LN W+ FVKK+ F PL
Sbjct: 187 GASASSPSRMLRAKAAAEEAVLNALPEATVMRPATMIGTEDRILNPWSMFVKKYGFLPLI 246
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G+T+ QPVYVVDVAAA+ AALKDDG+SMGK YELGGPD+FT HELAE+MYD IRE+P
Sbjct: 247 GGGTTKFQPVYVVDVAAAIVAALKDDGSSMGKTYELGGPDVFTTHELAEIMYDMIREWPR 306
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVK+PFP+AKA+A PR+ ++ KVPFPLP P +FNLD+INA T+DT+VSD AL FQDL +V
Sbjct: 307 YVKLPFPIAKAMAAPRDFMVNKVPFPLPSPQIFNLDQINALTTDTLVSDKALKFQDLDLV 366
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP F
Sbjct: 367 PHKLKGYPVEFLIQYRKGGPNF 388
>gi|222424711|dbj|BAH20309.1| AT2G20360 [Arabidopsis thaliana]
Length = 335
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 246/321 (76%), Positives = 283/321 (88%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
GI+ATVFG TGFLGRY+VQQLAKMGSQVLVPFRG ED PRHLKLMGDLGQ+VPMKF+PRD
Sbjct: 1 GIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQVVPMKFDPRD 60
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+++IKA MAKANVVINLIGREYETRN+SFED NH +AE++A +AKEHGGIMR+IQ+SCLG
Sbjct: 61 EDSIKAVMAKANVVINLIGREYETRNFSFEDANHHIAEKLALVAKEHGGIMRYIQVSCLG 120
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
AS SSPSR+ KAAAEEAVL LP ATIMRPA MIGTEDR+LN W+ FVKK+ F PL G
Sbjct: 121 ASVSSPSRMLRAKAAAEEAVLNALPEATIMRPATMIGTEDRILNPWSMFVKKYGFLPLIG 180
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G+T+ QPVYVVDVAAA+ AALKDDG+SMGK YELGGPD+FT HELAE+MYD IRE+P Y
Sbjct: 181 GGTTKFQPVYVVDVAAAIVAALKDDGSSMGKTYELGGPDVFTTHELAEIMYDMIREWPRY 240
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
VK+PFP+AKA+A PR+ ++ KVPFPLP P +FNLD+INA T+DT+VSDNAL FQDL +VP
Sbjct: 241 VKLPFPIAKAMAAPRDFMVNKVPFPLPSPQIFNLDQINALTTDTLVSDNALKFQDLDLVP 300
Query: 307 HKLKGYPTEYLIWYRKGGPKF 327
HKLKGYP E+LI YRKGGP F
Sbjct: 301 HKLKGYPVEFLIQYRKGGPNF 321
>gi|357137610|ref|XP_003570393.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Brachypodium distachyon]
Length = 412
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/322 (74%), Positives = 280/322 (86%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQQLAKMGSQVLVPFRGCED RHLKLMGDLGQIVPMK+NPR
Sbjct: 74 SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGCEDSHRHLKLMGDLGQIVPMKYNPR 133
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++IK +AK+NVVINLIGREYETRNY FE+VNH MAE++A I+KEHGGI+RFIQ+S L
Sbjct: 134 DVDSIKTAVAKSNVVINLIGREYETRNYGFEEVNHHMAEQLAMISKEHGGIVRFIQVSSL 193
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GASSSSPSR+ KAA EE+VL+E P ATIMRPA +IGTEDR+LN+WA + K + F PL
Sbjct: 194 GASSSSPSRMLRAKAAGEESVLKEFPEATIMRPATLIGTEDRILNRWAMYAKNWGFLPLM 253
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G GST+IQPVYVVDVAAA+ +LKDDGTSMGK YELGGPDI+TVH+LAELM++TIRE+P
Sbjct: 254 GGGSTKIQPVYVVDVAAAIVNSLKDDGTSMGKTYELGGPDIYTVHDLAELMFETIREWPR 313
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YV VPFP+A+A+A PRE+LL KVPFPLP P +FNLD+INA + D +VS+NALTF DL I
Sbjct: 314 YVNVPFPIARAIASPREMLLNKVPFPLPTPSIFNLDQINALSVDNLVSENALTFADLEIR 373
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+L+ YRKGGP F
Sbjct: 374 PHKLKGYPVEFLVCYRKGGPSF 395
>gi|116787047|gb|ABK24353.1| unknown [Picea sitchensis]
Length = 401
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/322 (71%), Positives = 275/322 (85%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGIIATVFG TGFLGRYVVQQLAK GSQVLVPFRG ED PRHLKLMGDLGQIVPMK+NPR
Sbjct: 67 SGIIATVFGATGFLGRYVVQQLAKTGSQVLVPFRGSEDSPRHLKLMGDLGQIVPMKYNPR 126
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+++IKA MAK+NVVINLIGREYETRN+SFE+VN ++E +A IAKEHGGI+RFIQ+SCL
Sbjct: 127 DESSIKAVMAKSNVVINLIGREYETRNFSFEEVNVDISEHLAKIAKEHGGIVRFIQLSCL 186
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GASSSSPS++ TKAAAEE V RELP ATI+RPAAM+GTEDR+LNKWAQ KK++ P+
Sbjct: 187 GASSSSPSKMQRTKAAAEEVVRRELPEATILRPAAMVGTEDRILNKWAQIAKKWSVLPII 246
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGSTR+QPVYV+DVAAA+ AALKDDGTS+GK YELGGPD+FT+ +L LM++ IRE P
Sbjct: 247 GDGSTRLQPVYVIDVAAAIIAALKDDGTSIGKTYELGGPDVFTIDQLVHLMFEMIREEPR 306
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
++K+P P+A+ ++ PRE LL KVPFPLP P +FN D +++ +D +VS +ALTF DL +V
Sbjct: 307 FIKIPIPIARLISSPREFLLNKVPFPLPTPEIFNQDYVDSLLADNVVSQDALTFTDLSVV 366
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+L YR GGP F
Sbjct: 367 PHKLKGYPIEFLFQYRTGGPSF 388
>gi|215717110|dbj|BAG95473.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 311
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/298 (74%), Positives = 259/298 (86%)
Query: 30 MGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYE 89
MGSQVLVPFRG ED RHLKLMGDLGQIVPMK+NPRD ++IKA MAK+NVVINLIGREYE
Sbjct: 1 MGSQVLVPFRGSEDCHRHLKLMGDLGQIVPMKYNPRDVDSIKAVMAKSNVVINLIGREYE 60
Query: 90 TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRE 149
TRNY F++VNH MAE++A I+KEHGGIMRFIQ+S LGAS+SSPSR+ KAA EE+VL+E
Sbjct: 61 TRNYGFDEVNHHMAEQLAMISKEHGGIMRFIQVSSLGASASSPSRMLRAKAAGEESVLKE 120
Query: 150 LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209
P ATIMRPA MIGTEDR+LN+WAQF K + F PL GST+IQPVYVVDVAAA+ +LK
Sbjct: 121 FPEATIMRPATMIGTEDRILNRWAQFAKNWGFLPLVDSGSTKIQPVYVVDVAAAIVNSLK 180
Query: 210 DDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVP 269
DDGTSMGK YELGGP+I+TVHELAELMY+TIRE+P Y+ VP P+A+A+A PRE+LL KVP
Sbjct: 181 DDGTSMGKTYELGGPEIYTVHELAELMYETIREWPRYIDVPLPIARAIASPREMLLNKVP 240
Query: 270 FPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGGPKF 327
FPLP P +FN D+INA++ DT+VSDNALTF DLGIVPHKLKGYP E+L+ YRKGGP F
Sbjct: 241 FPLPTPSIFNKDQINAFSVDTLVSDNALTFSDLGIVPHKLKGYPVEFLVCYRKGGPAF 298
>gi|222623910|gb|EEE58042.1| hypothetical protein OsJ_08874 [Oryza sativa Japonica Group]
Length = 310
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/300 (65%), Positives = 229/300 (76%), Gaps = 41/300 (13%)
Query: 28 AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87
AKMGSQVLVPFRG ED RHLKLMGDLGQIVPMK+NPRD ++IKA MAK+NVVINLIGRE
Sbjct: 39 AKMGSQVLVPFRGSEDCHRHLKLMGDLGQIVPMKYNPRDVDSIKAVMAKSNVVINLIGRE 98
Query: 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVL 147
YETRNY F++VNH MAE++A I+KEHGGIMRFIQ+S LGAS+SSPSR+ KAA EE+VL
Sbjct: 99 YETRNYGFDEVNHHMAEQLAMISKEHGGIMRFIQVSSLGASASSPSRMLRAKAAGEESVL 158
Query: 148 RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207
+E P +PVYVVDVAAA+ +
Sbjct: 159 KEFP-----------------------------------------EPVYVVDVAAAIVNS 177
Query: 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKK 267
LKDDGTSMGK YELGGP+I+TVHELAELMY+TIRE+P Y+ VP P+A+A+A PRE+LL K
Sbjct: 178 LKDDGTSMGKTYELGGPEIYTVHELAELMYETIREWPRYIDVPLPIARAIASPREMLLNK 237
Query: 268 VPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGGPKF 327
VPFPLP P +FN D+INA++ DT+VSDNALTF DLGIVPHKLKGYP E+L+ YRKGGP F
Sbjct: 238 VPFPLPTPSIFNKDQINAFSVDTLVSDNALTFSDLGIVPHKLKGYPVEFLVCYRKGGPAF 297
>gi|168026473|ref|XP_001765756.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682933|gb|EDQ69347.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/321 (56%), Positives = 247/321 (76%), Gaps = 1/321 (0%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVVQQLA+MGSQV+VP+RG +++ RHLKLMGDLGQIVP+K++ R
Sbjct: 72 SGVVATVFGATGFLGRYVVQQLARMGSQVMVPYRGLDEEWRHLKLMGDLGQIVPIKYDAR 131
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+++IKA +A +NV++N IG+EYETRN+SF+DVN+ ++ RI+ +AKEHGGI++++Q+SCL
Sbjct: 132 DEDSIKAAIANSNVIVNCIGKEYETRNFSFDDVNYGISNRISKLAKEHGGILKYVQMSCL 191
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPSR+ +K AAEEAV++ P ATI+R A ++G EDRLLN+WA KK F P+
Sbjct: 192 AADPHSPSRLIRSKHAAEEAVMQNFPEATILRTAPLVGVEDRLLNRWAIQAKKLPFVPIP 251
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDG +++QPV VVDVAAAV AA++D+G SMGK +ELGGPD+FTV+EL LM++ IREYP
Sbjct: 252 GDGLSKLQPVLVVDVAAAVIAAIRDEGFSMGKTFELGGPDVFTVNELVALMFEAIREYPR 311
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
V +P P+ + AMPRE+ +K+ P+P F+ D ++ D IVS +A+ DLGI
Sbjct: 312 VVHIPMPLCQIAAMPRELAMKR-GIPIPFSPSFSKDYLDQLACDLIVSQDAMGLADLGIT 370
Query: 306 PHKLKGYPTEYLIWYRKGGPK 326
HK+ G E+L YR GGP
Sbjct: 371 SHKIGGLTIEHLNAYRTGGPS 391
>gi|302788642|ref|XP_002976090.1| hypothetical protein SELMODRAFT_104564 [Selaginella moellendorffii]
gi|300156366|gb|EFJ22995.1| hypothetical protein SELMODRAFT_104564 [Selaginella moellendorffii]
Length = 353
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 177/321 (55%), Positives = 236/321 (73%), Gaps = 1/321 (0%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G I T+FG+TG LGR VV LAK+G+Q ++P+RG ED PRHLK+MGDLGQIVP N R
Sbjct: 26 TGFIVTIFGSTGMLGRAVVNNLAKIGAQCMIPYRGLEDKPRHLKVMGDLGQIVPFVCNIR 85
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D++ I+A +AK+NVVINLIG+EYETRNY FE+VN +A+RIA I+KEHGGI+R+I SC+
Sbjct: 86 DEDAIRAAIAKSNVVINLIGQEYETRNYGFEEVNIDIAQRIARISKEHGGIVRYIHTSCV 145
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA +SPS+ TKA EEAV +E P ATIMRPA+M G D+ LN++A K + P+F
Sbjct: 146 GADENSPSKQHRTKALGEEAVRQEFPEATIMRPASMFGYHDKFLNRFATKAKFWPNVPMF 205
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKD-DGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
DG TR+QPV V+DVAAA AA+K+ +G +GK+YELGGPD++T+HEL M++ +RE P
Sbjct: 206 FDGKTRVQPVCVLDVAAAFLAAVKEKEGIHVGKVYELGGPDVYTIHELLLWMFEVLREKP 265
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+ +P P+A+AV+ RE K+VP PLP+ I++ D +VS +ALTF++LGI
Sbjct: 266 RIINIPLPLAEAVSRVREFFFKRVPVPLPQLWPCYRHYIDSLKVDQVVSPDALTFEELGI 325
Query: 305 VPHKLKGYPTEYLIWYRKGGP 325
P L G TEYL +YR+GGP
Sbjct: 326 KPRPLGGLATEYLFYYREGGP 346
>gi|302769736|ref|XP_002968287.1| hypothetical protein SELMODRAFT_89106 [Selaginella moellendorffii]
gi|300163931|gb|EFJ30541.1| hypothetical protein SELMODRAFT_89106 [Selaginella moellendorffii]
Length = 362
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 177/321 (55%), Positives = 235/321 (73%), Gaps = 1/321 (0%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G I T+FG+TG LGR VV LAK+G+Q ++P+RG ED PRHLK+MGDLGQIVP N R
Sbjct: 35 TGFIVTIFGSTGMLGRAVVNNLAKIGAQCMIPYRGLEDKPRHLKVMGDLGQIVPFVCNIR 94
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
DD+ I+A +AK+NVVINLIG+EYETRNY FE+VN +A+RIA I+KEHGGI+R+I SC+
Sbjct: 95 DDDAIRAAIAKSNVVINLIGQEYETRNYGFEEVNIDIAQRIARISKEHGGIVRYIHTSCV 154
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA +SPS+ TKA EEAV +E P ATIMRPA+M G D+ LN++A K + P F
Sbjct: 155 GADENSPSKQHRTKALGEEAVRQEFPEATIMRPASMFGYHDKFLNRFATKAKFWPNVPTF 214
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKD-DGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
DG T++QPV V+DVAAA AA+K+ +G +GK+YELGGPD++T+HEL M++ +RE P
Sbjct: 215 FDGKTKVQPVCVLDVAAAFLAAVKEKEGIHVGKVYELGGPDVYTIHELLLWMFEVLREKP 274
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+ +P P+A+AV+ RE K+VP PLP+ I++ D +VS +ALTF++LGI
Sbjct: 275 RIINIPLPLAEAVSRVREFFFKRVPVPLPQLWPCYRHYIDSLKVDQVVSPDALTFEELGI 334
Query: 305 VPHKLKGYPTEYLIWYRKGGP 325
P L G TEYL +YR+GGP
Sbjct: 335 KPRPLGGLATEYLFYYREGGP 355
>gi|168009832|ref|XP_001757609.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691303|gb|EDQ77666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/321 (51%), Positives = 230/321 (71%), Gaps = 12/321 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYV+QQLA+MGSQV+ + G LGQIVP+K++ R
Sbjct: 71 SGVVATVFGATGFLGRYVIQQLARMGSQVMA-----------FEAHGRLGQIVPIKYDAR 119
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+ +IK +A +NV++N IG+EYETRN+SFEDVNH ++ RI+ +A+EHGGI++++Q+SCL
Sbjct: 120 DEGSIKPVIANSNVIVNCIGKEYETRNFSFEDVNHGISNRISKLAREHGGILKYVQMSCL 179
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ SPSR+ +K AAEE V + P ATI+R M+G EDRLLN+WA KK P+
Sbjct: 180 AAAPDSPSRLLRSKHAAEEVVKQNFPEATILRTGPMVGVEDRLLNRWAIQAKKLPVVPIP 239
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDG T++QPV VVDVAAAV AA++D+G SMGK +ELGGPD+FTV++L L+++ IRE+P
Sbjct: 240 GDGLTKMQPVLVVDVAAAVIAAIRDEGFSMGKTFELGGPDVFTVNDLVTLVFEAIREHPR 299
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
V +P +A+ +AMPRE+ +K+ P+P F+ D ++ + D +VS +A+ DLG+
Sbjct: 300 VVHIPMALAQLLAMPREVAMKR-GIPIPFSPTFSKDYLDQLSCDLVVSSDAMGLADLGVT 358
Query: 306 PHKLKGYPTEYLIWYRKGGPK 326
HK+ G E+L YR GGP
Sbjct: 359 SHKIGGLTIEHLNAYRTGGPS 379
>gi|449445818|ref|XP_004140669.1| PREDICTED: ABC transporter C family member 5-like [Cucumis sativus]
gi|449487419|ref|XP_004157617.1| PREDICTED: ABC transporter C family member 5-like [Cucumis sativus]
Length = 1752
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 131/185 (70%), Positives = 154/185 (83%), Gaps = 10/185 (5%)
Query: 153 ATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST----------RIQPVYVVDVAA 202
ATI+RPA MIGTEDR+LN WA F KK+ F PLFG+GST RIQPVYVVDVA
Sbjct: 1554 ATILRPATMIGTEDRILNPWAHFAKKYGFIPLFGNGSTNYPNHQCYLCRIQPVYVVDVAG 1613
Query: 203 AVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPRE 262
+ +ALKDDGTS+GK+YELGGP+I++VH+LAELM+D IRE+PHY+KVPFP+AKA+A PRE
Sbjct: 1614 GIVSALKDDGTSIGKVYELGGPEIYSVHDLAELMFDVIREWPHYLKVPFPIAKAIATPRE 1673
Query: 263 ILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRK 322
ILL KVPFPLP P +FNLD+I A T DT+VS+ ALTF DLGIVPHKLKGYP E+LI YRK
Sbjct: 1674 ILLNKVPFPLPTPAIFNLDQILALTQDTVVSEKALTFNDLGIVPHKLKGYPVEFLISYRK 1733
Query: 323 GGPKF 327
GGP+F
Sbjct: 1734 GGPQF 1738
>gi|412992660|emb|CCO18640.1| predicted protein [Bathycoccus prasinos]
Length = 431
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/321 (47%), Positives = 201/321 (62%), Gaps = 2/321 (0%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
YSGI A VFG+TGFLGRYVV LAK GS+VLVP R E+ +HLK MGDLGQIV ++
Sbjct: 91 YSGITAAVFGSTGFLGRYVVNHLAKNGSRVLVPTRCSENHRQHLKPMGDLGQIVQFDYSM 150
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RDD IK + +ANVVIN++GRE+ETRN+SFEDV+ R+A KE + R I +S
Sbjct: 151 RDDEAIKYAVERANVVINMVGREWETRNFSFEDVHRDFPRRLAEACKESSSVKRLIHVSA 210
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
LGA ++ S+ + TKA +E V R P ATI++PA +IG EDR LN +A+ KF F PL
Sbjct: 211 LGADVNAKSKYYRTKAEGDEEVRRIFPRATIVKPAKLIGVEDRFLNVFAEHASKFPFVPL 270
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G ++ QPV V DVA A++ D+ T +GK Y L G FT+ ELA+L D R
Sbjct: 271 TGLGESKHQPVSVDDVAIAISQMPYDEET-VGKEYVLAGEKTFTMEELAKLTVDAGRFRS 329
Query: 245 HYVK-VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
V +P V K ++ P E LL +VPFPLP P ++A +D + N L F++LG
Sbjct: 330 ARVAYIPKFVYKLLSAPHEFLLNRVPFPLPTPKGLTRSFVDAQDADYVKKPNELGFKELG 389
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
+ P K+ G +YL YR GG
Sbjct: 390 MTPAKMDGITIDYLRSYRSGG 410
>gi|145351563|ref|XP_001420142.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580375|gb|ABO98435.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 366
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 143/321 (44%), Positives = 209/321 (65%), Gaps = 3/321 (0%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SGI TVFG+TGFLGRYVV +AK GS++++P R E+D +HLK+MGDLGQIV + +
Sbjct: 29 FSGITCTVFGSTGFLGRYVVHHVAKSGSRMILPTRCSENDRQHLKVMGDLGQIVQLDYGI 88
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD+ TI+ + ++NVVIN++GRE+ETRN+SFEDVN +++A I + G+ R + +S
Sbjct: 89 RDEETIRYAVERSNVVINMVGREWETRNFSFEDVNVTFPKKLAEICAD-VGVRRLVHVSA 147
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
LGA PS + +KAA E AV P ATI+RPA ++G EDR LN + + +K+ P+
Sbjct: 148 LGAEEDHPSAYYRSKAAGEAAVREAFPSATIVRPAKIVGVEDRFLNIFGEHSRKYPAVPI 207
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G T+ QPV+V DVA A+ + D+ TS G+ YEL G ++T ELA+++ TIR
Sbjct: 208 IDGGDTKHQPVFVDDVAVAIRQIVHDELTS-GRTYELAGNKVYTFDELAKMVLKTIRTRK 266
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+P + KA++ P E LL++VPFP+P P I+A + D + ++L F DLGI
Sbjct: 267 STAYIPSFIMKALSCPHEWLLRRVPFPMPTPLGLTRSYIDAQSRDYVKRADSLGFSDLGI 326
Query: 305 VPHKLK-GYPTEYLIWYRKGG 324
P+ ++ GY +YL +R GG
Sbjct: 327 EPNNIENGYVLDYLRSFRAGG 347
>gi|255082926|ref|XP_002504449.1| predicted protein [Micromonas sp. RCC299]
gi|226519717|gb|ACO65707.1| predicted protein [Micromonas sp. RCC299]
Length = 390
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 146/321 (45%), Positives = 214/321 (66%), Gaps = 4/321 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI +TVFG++GFLGRYVV + K GS++++P R E+ +HLK+MGDLGQIV + F+ R
Sbjct: 57 SGITSTVFGSSGFLGRYVVNHIGKSGSKMILPNRCNENARQHLKVMGDLGQIVHLDFSIR 116
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D + IK + ++NVV+N++GRE+ETRN+SFEDV+ ++A I KE G+ R + +S L
Sbjct: 117 DADAIKYAVERSNVVVNMVGREWETRNFSFEDVHVEFPAKLAEICKEV-GVERLVHVSAL 175
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS ++PS+ + TKAA ++AV P ATI++PA +IGTEDRLLN +A+ KF PL
Sbjct: 176 GASHTNPSKYYQTKAAGDDAVRAAFPNATIVKPAKLIGTEDRLLNVFAEHTCKFPLAPLV 235
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE--Y 243
DG ++ QPVYV DVA A+ A ++D+ T+ G+ +EL G ++T+ ++ + TIR Y
Sbjct: 236 DDGESKHQPVYVDDVALAIQAIVEDEETA-GQTFELAGDKVYTMEDMLRFVQKTIRTPGY 294
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
P + VP + +A+ P E LL+KVPFPLP P I+A + + + + F+ LG
Sbjct: 295 PKILYVPSFILRALGAPHEFLLRKVPFPLPTPTGLTKSYIDAQSVNYLKNPRVPGFEQLG 354
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P KL+G +YL +R GG
Sbjct: 355 IKPAKLEGVVIDYLRAFRFGG 375
>gi|384253270|gb|EIE26745.1| NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]
Length = 378
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 154/321 (47%), Positives = 211/321 (65%), Gaps = 5/321 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMK-FNP 64
SG+ ATVFG +GFLGRY+V LA+ G+QV+VP+R E D ++L+ MGDLGQI K FN
Sbjct: 42 SGVTATVFGCSGFLGRYIVNALARQGTQVVVPYRRDELDVQYLRQMGDLGQIYQWKDFNI 101
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RDD+ IK + ++NV+INL G + ET N+SFEDV+ A RIA A ++ RF+Q SC
Sbjct: 102 RDDSHIKDAIKRSNVIINLTGLDKETWNFSFEDVHIDAATRIAQAAADNPLTERFVQFSC 161
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GAS ++ SR TKAA + AV LP+AT+ +P ++GTEDR+ N +A K+ F PL
Sbjct: 162 IGASENAASRRLRTKAAGDAAVRSILPYATVFKPGHVVGTEDRMYNIYATMAKQVPFIPL 221
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G T++QP YV DVA AV +LK ++GK Y L GP++ TV ++ EL+Y TIRE
Sbjct: 222 VGGGETKLQPTYVRDVADAVIHSLKTK-EALGKEYFLAGPEVLTVKQIVELVYTTIREPI 280
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+P PVA+ +A+PRE L K FP+P +F D I T D ++ N LT+ DL +
Sbjct: 281 STFNLPLPVARLLAVPREKLFKM--FPIPVNTMFTADYIEEMTQDHVLPPNVLTYADLEV 338
Query: 305 VPHKL-KGYPTEYLIWYRKGG 324
VP K+ +G+P E+L YR GG
Sbjct: 339 VPKKVTEGFPIEHLRHYRVGG 359
>gi|303281276|ref|XP_003059930.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458585|gb|EEH55882.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 353
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/322 (45%), Positives = 205/322 (63%), Gaps = 5/322 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMK-FNP 64
SGI +TVFG TG+LGRYVV L K GS++++P R ++ +HLK+MGDLGQIV +
Sbjct: 22 SGITSTVFGATGYLGRYVVNHLGKSGSRMILPTRCGDNAKQHLKVMGDLGQIVDLAGLKI 81
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RDD+ IK + ++NVV+NL+GRE+ETRN+SF+DV+ ER+A I KE G + R + +S
Sbjct: 82 RDDSAIKYAVERSNVVVNLLGREWETRNFSFDDVHRDFPERLARICKELG-VERLVHVSA 140
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
LGA+ PS+ + TKA +EAV P AT+++PA +IGTEDRLLN +A+ KF L
Sbjct: 141 LGATLDHPSKYYRTKAEGDEAVRAAFPNATVVKPAKLIGTEDRLLNVFAEHTCKFPVQTL 200
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR--E 242
DG ++ QPVYV DVA A+ A + D+ T+ G+ +EL G I T+ ++ ++ IR
Sbjct: 201 IDDGGSKHQPVYVDDVALAIRAIVHDESTA-GRTFELCGEKILTMEDMLKMTQSIIRAQN 259
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
V VP + K +A P E LL +VPFPLP P I+A D + + F++L
Sbjct: 260 ASRIVYVPSFILKMLAAPHEFLLNRVPFPLPTPTGLTRSYIDAQGEDYLKDPKSEGFKEL 319
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GIVP KL+G +YL +R GG
Sbjct: 320 GIVPAKLEGVVIDYLRAFRFGG 341
>gi|224152461|ref|XP_002337243.1| predicted protein [Populus trichocarpa]
gi|222838542|gb|EEE76907.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/150 (81%), Positives = 137/150 (91%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQQLAKMGSQVLVPFRG +DDPRHLKLMGDLGQIVPMK+NPR
Sbjct: 59 SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSDDDPRHLKLMGDLGQIVPMKYNPR 118
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+N+IKA MAKANVVINLIGR+YETRNYSFE++NH MA ++A I+KEHGGIMRFIQ+SCL
Sbjct: 119 DENSIKAVMAKANVVINLIGRDYETRNYSFEELNHAMAGQLAMISKEHGGIMRFIQVSCL 178
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATI 155
GAS+SSPSR+ KAA EEAVLRE+P I
Sbjct: 179 GASASSPSRLLRAKAAGEEAVLREMPEVNI 208
>gi|307110188|gb|EFN58424.1| hypothetical protein CHLNCDRAFT_34039 [Chlorella variabilis]
Length = 415
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 198/328 (60%), Gaps = 9/328 (2%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM-KFNP 64
SGI AT+FG +GFLGRYV + G Q+++P R + D +HL+ MGDLGQ+V M F+
Sbjct: 65 SGITATIFGCSGFLGRYVANAIGNTGGQLVLPHRCDDTDVQHLRTMGDLGQVVMMPDFSI 124
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD+ ++ ++++N+V+N++G ET NY FE+V+ R+A ++ G + RFI +S
Sbjct: 125 RDEEAVRRAISRSNLVVNMVGAGQETWNYGFEEVHIEWPARLARAIRDSGKVERFIHLSA 184
Query: 125 LGASSSSPSRVFSTKAAAEEAVLREL-PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
LGA + +PSR TKAA +E V EL P +TI +PAA+ GTEDRL N +A K+ F P
Sbjct: 185 LGAEADAPSRRLRTKAAGDEVVRSELGPISTIFKPAAVSGTEDRLFNMFATMAKRTPFLP 244
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G TR+QPV+V DVAAA+ +LK S+G+ Y L GPD+ TV +L Y TIRE
Sbjct: 245 LIDGGKTRMQPVWVRDVAAAIMNSLKTY-DSLGQTYYLAGPDVMTVAQLVAFTYHTIRER 303
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD---EINAYTSDTIVSDNALTFQ 300
V +P VA +A + L + PL P +F+ D E+ D ++ L F+
Sbjct: 304 NASVPMPAAVAGVLAKGWDALGRST--PLRGPLMFSSDFIAEMKGGWGDYVMPSGVLGFE 361
Query: 301 DLGIVPHKL-KGYPTEYLIWYRKGGPKF 327
L + PH++ +G P EYL YR GG F
Sbjct: 362 HLDVEPHRVAEGIPIEYLRHYRSGGYDF 389
>gi|440796531|gb|ELR17640.1| NADH dehydrogenase, putative [Acanthamoeba castellanii str. Neff]
Length = 376
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 196/325 (60%), Gaps = 22/325 (6%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGR+VV +L K+GSQV+VP+RG E RHLK+MGDLGQI P+ F+ R
Sbjct: 43 SGVVATVFGCTGFLGRFVVNRLGKIGSQVIVPYRGEESAFRHLKVMGDLGQIAPVWFDLR 102
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D T++ + +NVVINL+G+ +ETRN+SF+DV+ IA AKE G+ RFIQ+S
Sbjct: 103 DKETVRRAVQYSNVVINLLGKRWETRNFSFDDVHPEATRTIAEAAKE-AGVERFIQVSAA 161
Query: 126 GASSSSPSRVFSTKAAAEEAVLREL-PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
GA +SPS F+ E VLRE+ P ATI+RP + G D L KW + ++P
Sbjct: 162 GADVNSPS-AFARSKGESEKVLREIFPDATILRPTVLYGARDNFLVKWGMIAR---YWPA 217
Query: 185 FGD--GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
F T+ QP+YV D+A A+ AL D T+ GK YELGGP ++T+ E+ EL+
Sbjct: 218 FVRTLKDTKFQPLYVADMATALMNALADPETA-GKTYELGGPKVYTLEEITELVTRLTFL 276
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS-DTIVSDNA-LTFQ 300
P V VPFP +A A + L+K PR F ++E++ + S D +V +NA LT
Sbjct: 277 EPSVVDVPFPALRAFAQVTQPFLRK-----PR---FTVEELDYWKSGDVVVPENAPLTIN 328
Query: 301 DLGIVPHKLKGYPTE---YLIWYRK 322
+L L E +L YRK
Sbjct: 329 NLNFSTEDLTVLEKEAVNFLRLYRK 353
>gi|328767653|gb|EGF77702.1| hypothetical protein BATDEDRAFT_37370 [Batrachochytrium
dendrobatidis JAM81]
Length = 383
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 193/319 (60%), Gaps = 15/319 (4%)
Query: 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
ATVFG TGFLGRYVV L K+G+ V+ P+RG +D+ RHL+ MGDLGQIV ++F+ R +
Sbjct: 54 ATVFGATGFLGRYVVNNLGKIGTTVVTPYRGSDDERRHLRNMGDLGQIVQLRFDLRREEQ 113
Query: 70 IKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
I + ++VV NL+GR+YET+N++FE V+ A R+A IA+E+ G+ RFI +S L AS
Sbjct: 114 IAECLKHSDVVYNLVGRDYETKNFNFEQVHVEGARRLARIAREN-GVARFIHMSALNASE 172
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKF--NFFPLFGD 187
+SPS+ TKA E+AVL E P ATI+R A M G EDR N+ F K + P+ +
Sbjct: 173 NSPSQFLRTKALGEKAVLEEYPDATIVRSATMYGDEDRFWNRMGWFAKWAPGSILPVVHN 232
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G RI+PVYV DVA ++ L++D S+GK+ EL GP + L L + +
Sbjct: 233 GKARIRPVYVGDVAIVLSKMLQNDA-SVGKMVELYGPREYHYRTLVGLFQKIVLRERTIL 291
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT-SDTIVSDNA--LTFQDLGI 304
+P P+AK A + LL +P+ P D+I SD + SD++ + F+D I
Sbjct: 292 NIPKPIAKLAAKIWDQLL---VYPVISP-----DDIERQCISDVVSSDHSDIMKFKDFDI 343
Query: 305 VPHKLKGYPTEYLIWYRKG 323
+PH ++ +++ YR G
Sbjct: 344 LPHTIEETIGRFVLHYRPG 362
>gi|452823042|gb|EME30056.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Galdieria
sulphuraria]
Length = 385
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 184/320 (57%), Gaps = 8/320 (2%)
Query: 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
+IATVFG+TGFLGRYVV QL ++GSQV+ +RG E D RHLK MGDLGQI+P + R
Sbjct: 63 VIATVFGSTGFLGRYVVNQLGRVGSQVIATWRGDELDARHLKPMGDLGQIIPFEIELRHH 122
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+++ +M +NVVINL+G+ Y TR YS DV+ + IA IAKE G+ FI +S +GA
Sbjct: 123 ESLRKSMENSNVVINLLGKNYPTRYYSLYDVHVTASRTIAQIAKE-VGVEHFIHVSSIGA 181
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+S S TKA EEAV P ATI+RP + G ED +N+ VK F F PL +
Sbjct: 182 DKNSKSEFLRTKALGEEAVRDIFPSATIIRPCDIFGDEDNFINRACIIVKTFPFIPLVNE 241
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G ++QPV+ D+A + A +D +GK +ELGG ++T+ E E + + +
Sbjct: 242 GRCKVQPVWCNDIAMVIRRASQDPEMFLGKTFELGGTKVYTIREFYEWILRETKLPNTFQ 301
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS--DNALTFQDLGIV 305
+P VA+ + E K++P P P + D + TSD IV+ + LTF D+ V
Sbjct: 302 DLPQRVAELMLFFAE---KRIPILNPDPK-YTRDHLIRETSDMIVTCKNGELTFADVDTV 357
Query: 306 PHKLKG-YPTEYLIWYRKGG 324
PH+ E YR+ G
Sbjct: 358 PHEFDSDIAKEVTKLYRRAG 377
>gi|449017696|dbj|BAM81098.1| NADH dehydrogenase I alpha subcomplex 9, mitochondrial precursor
[Cyanidioschyzon merolae strain 10D]
Length = 392
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 195/337 (57%), Gaps = 22/337 (6%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGIIATVFG+TGFLGRYVV QL ++GS V V +RG E D RHLK+MGDLGQI P++ R
Sbjct: 55 SGIIATVFGSTGFLGRYVVSQLGRIGSTVFVAWRGDELDNRHLKVMGDLGQINPIQIEAR 114
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D N+++ ++A +NVVINLIG+ Y+TR YS EDVN +AE IA +A + FI +S L
Sbjct: 115 DINSLRRSIAGSNVVINLIGKWYDTRYYSLEDVNIGVAETIARLASLE-QVEHFIHVSAL 173
Query: 126 GASSSSPS-----RVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
A S + S R +K E V + P ATI RPA + G EDR L + A + +
Sbjct: 174 PAYSKANSEYPEDRWSRSKIEGERLVRQAFPRATIFRPADIWGMEDRFLARIATSLSRLG 233
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
F P+ G +R QPV+V DVA A+ +++++ ++ GK YEL GP + T E+ E + D+
Sbjct: 234 FVPVVQGGKSRTQPVWVDDVARAIVSSVRNPESTAGKTYELFGPRVLTRREVVEFVADST 293
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPG-LFNLDEINAYTSDTIVSD----- 294
+ + + +P P+AK V + L + PL P LF + SD I S
Sbjct: 294 KRELNLLNLPLPIAKVV-----MRLTGMRLPLVNPSPLFTESDAVREASDVIASSILSSG 348
Query: 295 ---NAL-TFQDLGIVPHK-LKGYPTEYLIWYRKGGPK 326
AL TF DL I+PH L L YRKGG +
Sbjct: 349 EEREALGTFDDLDIIPHDLLSDLGRNTLRQYRKGGDR 385
>gi|302846108|ref|XP_002954591.1| NADH:ubiquinone oxidoreductase 39 kDa subunit [Volvox carteri f.
nagariensis]
gi|300260010|gb|EFJ44232.1| NADH:ubiquinone oxidoreductase 39 kDa subunit [Volvox carteri f.
nagariensis]
Length = 395
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 194/326 (59%), Gaps = 6/326 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM-KFNP 64
SG++ATVFG+ GF+G Y+V +LAK GSQV+ PFR E++ HLK MGDLGQ+V + + +
Sbjct: 50 SGVVATVFGSNGFVGSYIVNELAKCGSQVVCPFRSTENEAMHLKQMGDLGQVVLLPELDI 109
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
R+D IK ++++NVVIN +G +T N+SFEDV+ +R+A IA E G + R I S
Sbjct: 110 RNDEHIKRAISRSNVVINCVGMRLQTMNWSFEDVHVDFPKRLAKIAAESGHVDRLIHFSD 169
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GA + S+ TKA +EA+L P ATIMRP ++G ED N + F P+
Sbjct: 170 MGADVNHKSKRMRTKALGDEALLEAFPSATIMRPGDIVGIEDHFYNYLIYQLTLTVFAPV 229
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
GS ++QP YV+DVA AVT+AL+ S G+ Y LGGP++ TV E+ +L+ T+R +
Sbjct: 230 VETGSNKLQPTYVLDVADAVTSALRKP-ESKGQTYYLGGPEVLTVREVYDLLLKTLRIHR 288
Query: 245 HYV-KVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
+P + KA+ P + + +K+P P+ P + D + D +V + DL
Sbjct: 289 DDTWHLPAWIVKAMYKPMDSVRRKLPGLPMTSP-MATDDYVEECLRDKVVPAGVKGYADL 347
Query: 303 GIVPHKL-KGYPTEYLIWYRKGGPKF 327
IVP K+ G P E + R GG ++
Sbjct: 348 DIVPQKVTDGLPIEPVRHARVGGYRW 373
>gi|159489336|ref|XP_001702653.1| NADH:ubiquinone oxidoreductase 39 kDa subunit [Chlamydomonas
reinhardtii]
gi|33943527|gb|AAQ55458.1| putative NADH:ubiquinone oxidoreductase 39 kDa subunit precursor
[Chlamydomonas reinhardtii]
gi|158280675|gb|EDP06432.1| NADH:ubiquinone oxidoreductase 39 kDa subunit [Chlamydomonas
reinhardtii]
Length = 397
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 191/326 (58%), Gaps = 6/326 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM-KFNP 64
SGI ATVFG GFLG Y+V +LAK GSQV+ PFR E++ HLK MGDLGQIV + + +
Sbjct: 52 SGITATVFGANGFLGSYIVNELAKRGSQVVCPFRSTENEAMHLKQMGDLGQIVLLPELDI 111
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
R+D+ IK ++++NV+IN +G +T+N+SFEDV+ +R+A +A E G + R I S
Sbjct: 112 RNDDDIKRAISRSNVIINCVGMRLQTKNWSFEDVHVDFPKRLAKLAAETGQVQRLIHFSD 171
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GA + S TKA ++ VL P ATI+RP ++G ED N + F P+
Sbjct: 172 MGADENHKSLRMRTKAVGDKEVLDAFPDATIVRPGDIVGIEDHFYNYLIYQLTLTVFAPV 231
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY- 243
GS +IQP YV+DVA AV A L+ T+ GK LGGP++ T+ E+ +L+ T+R Y
Sbjct: 232 VESGSNKIQPTYVLDVADAVAALLRKPDTA-GKTLYLGGPEVLTMREVYDLLLKTLRIYR 290
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
V +P KA+ P + + + +P P+ P L D + D +V AL + DL
Sbjct: 291 DDTVHLPAWAVKAMYKPFDSVRRMLPGLPMTSP-LATEDYVEEMLRDKVVPAGALGYADL 349
Query: 303 GIVPHKL-KGYPTEYLIWYRKGGPKF 327
GIVP K+ G E + R GG ++
Sbjct: 350 GIVPQKVTDGLAIEPVRHARVGGYRW 375
>gi|281202903|gb|EFA77105.1| NADH dehydrogenase 1 alpha subcomplex subunit 9 [Polysphondylium
pallidum PN500]
Length = 369
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 186/302 (61%), Gaps = 13/302 (4%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGF GRY+VQ L K G QV+VP+RG + R LK++G+LGQI+P++++ R
Sbjct: 51 SGLVATVFGVTGFTGRYIVQLLTKSGIQVVVPYRGEDYSFRDLKVLGELGQIIPVRYDIR 110
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ M+ +N+VIN+I R YETRN+SFEDVN A +IA ++K I +++ +S L
Sbjct: 111 DQDSIERAMSHSNIVINMISRNYETRNFSFEDVNIDAATKIAKLSKSL-DIEKYVHVSAL 169
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS S S+ TKA E+AV LP TI+RP+ M G EDRL+NKW++ V F P +
Sbjct: 170 NASEESASKWSRTKAVGEKAVKEILPNCTIVRPSIMFGDEDRLINKWSRVVAFSPFIPRY 229
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYP 244
+ + QP++ VD A A+ + L + ++ GK YELGG +IF + +++ + T+++
Sbjct: 230 NE-DLKFQPLHCVDFANAMMSIL-ELQSAAGKTYELGGDEIFAWGQFLDMITEATVQQDK 287
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+ V F + E + R +F DE+ D +VS +ALT +DL I
Sbjct: 288 RNIPVSFEAMRFATKFLEYM---------RDPVFLADELEYLNQDLLVSADALTLKDLKI 338
Query: 305 VP 306
P
Sbjct: 339 KP 340
>gi|66823679|ref|XP_645194.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Dictyostelium discoideum AX4]
gi|74857844|sp|Q559Z0.1|NDUA9_DICDI RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; Flags: Precursor
gi|60473339|gb|EAL71285.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Dictyostelium discoideum AX4]
Length = 356
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 193/320 (60%), Gaps = 15/320 (4%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNP 64
+G++ATVFG TGF GRY+VQ LA+ G QV+VP+R CED+ R LK++G+LGQI+P++F+
Sbjct: 38 TGLVATVFGATGFTGRYLVQLLARTGIQVVVPYR-CEDEGFRDLKVLGELGQIIPVRFDI 96
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD +I+ ++ +N+VIN+ GR+YETRN+S +D+N A RIA ++K + ++I +S
Sbjct: 97 RDSESIERAISHSNIVINMAGRDYETRNFSLDDINVHAASRIADLSK---NVEKYIHVST 153
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L AS SPS +KA E+ +P T++RP+ + G ED+ +NKW++ + + F P
Sbjct: 154 LRASEDSPSHFSRSKAIGEKLTREIIPNCTVVRPSIIFGDEDKFINKWSKVSQNWPFIPR 213
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
+ + +IQP++ D+A+ + + L+ GTS GK+YE G ++FT E +++ D +Y
Sbjct: 214 Y-NQQHKIQPLHCYDLASGILSILETPGTS-GKVYEFAGDEVFTWDEFLDMIIDGTAQYS 271
Query: 245 HYVKVPFPVAKA-VAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
K+ PV+ + E LL++ R F D+I+ + D + ALT +DL
Sbjct: 272 ---KLNIPVSNDFMKFISEHLLER----FARNPNFIKDQIDYHNQDMTTTVGALTLKDLN 324
Query: 304 IVPHKLKGYPTEYLIWYRKG 323
+ ++ YR G
Sbjct: 325 VTTTPIQEKLIRLSRMYRPG 344
>gi|224095898|ref|XP_002188497.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Taeniopygia guttata]
Length = 373
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 193/318 (60%), Gaps = 12/318 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV +L ++GSQV++P+R + D +L+ MGDLGQ++ ++++ R
Sbjct: 49 SGIVATVFGATGFLGRYVVNRLGRIGSQVIIPYRCDQYDLMYLRPMGDLGQLLFLEWDCR 108
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIG+E+ET+N+ FED + + IA I+KE G+ +FI +S L
Sbjct: 109 DKDSIRRAVEHSNVVINLIGKEWETKNFKFEDEFVNIPQSIARISKE-AGVEKFIHVSHL 167
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS SPS+ KA EEAV E P A I++P+ M G EDR LN +A ++ F PL
Sbjct: 168 NASMKSPSKYLRNKAVGEEAVREEFPDAVILKPSEMFGREDRFLNHYAN-MRWFGGVPLV 226
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G + QPVYVVDVA A+ A+K+ + GK Y L GP + ++++ E +Y
Sbjct: 227 SLGKKTVKQPVYVVDVAKAIVNAIKNP-DAKGKTYALAGPHRYLLYDMVEYIYAVA---- 281
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
H+ +P+P+ + + + PF P L D+++ + + + + F++LGI
Sbjct: 282 HHPFIPYPLPRPLYHFVARFFEMNPF---EPWL-TRDKVDRFHTTDMTFPDLPGFEELGI 337
Query: 305 VPHKLKGYPTEYLIWYRK 322
P L+ E L +R+
Sbjct: 338 EPTPLEQKAIEVLRRHRR 355
>gi|328868176|gb|EGG16556.1| Transcription regulatory protein SNF5 [Dictyostelium fasciculatum]
Length = 1352
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 185/302 (61%), Gaps = 12/302 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++AT+FG TGF GRY+VQ + K G QV+VP+RG + R LK++G+LGQ++P++++ R
Sbjct: 1033 SGLVATIFGVTGFTGRYLVQMMTKSGIQVVVPYRGEDYSFRDLKVLGELGQVIPVRYDIR 1092
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ +I+ ++ +N+VINL GR + TRNY+ D+N AERIA ++ + G I RF+ +S L
Sbjct: 1093 NEESIERAISHSNIVINLAGRFWPTRNYTLPDINIDAAERIARLSNKMGNIERFVHVSAL 1152
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
G S S TKA E+ V +P ATI+RP+ M G EDRL+NKW++ ++ F P +
Sbjct: 1153 GVSEDHKSEYARTKAVGEKIVRDLIPSATIVRPSLMFGDEDRLINKWSKAIQWAPFVPRY 1212
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ + QP++ VD A A+ + L + T+ GK+YELGG +IFT + +++ I
Sbjct: 1213 NED-LKFQPLHCVDFAKAIMSIL-ELQTTHGKVYELGGDEIFTWGQFLDMV---IEATAA 1267
Query: 246 YVKVPFPVA-KAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
K PV+ + + M E+L R LF DEI + D +V +AL +DL +
Sbjct: 1268 TEKRNIPVSVEFMKMAAEVL------QYARDPLFLPDEIEYHNQDLLVGQDALGLKDLRV 1321
Query: 305 VP 306
P
Sbjct: 1322 KP 1323
>gi|348519170|ref|XP_003447104.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Oreochromis niloticus]
Length = 381
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 184/334 (55%), Gaps = 41/334 (12%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SGI ATVFG TGFLGRYVV +L ++GSQ+++P R + D H + MGDLGQI+ ++++
Sbjct: 54 FSGIAATVFGATGFLGRYVVNRLGRIGSQIIIPHRCDQYDLMHFRPMGDLGQIIFLEWDA 113
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
R+ ++IK M ++VVINL+GRE+ETRN+ FEDV + ++IA A+E GI +F+ +S
Sbjct: 114 RNKDSIKRAMEHSDVVINLVGREWETRNFRFEDVFVTIPQQIARAARE-AGITKFVHMSH 172
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L A SPS+ KA E AV E P A IM+P+ M G EDR N +A N PL
Sbjct: 173 LNADIRSPSKYLRNKAVGETAVREEFPDAIIMKPSEMFGREDRFFNYYANMRWFGNAVPL 232
Query: 185 FGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
G + QPV+VVDVA A+ +A++D + GK Y L GP+ + +H+L E +Y
Sbjct: 233 IALGKKTVKQPVHVVDVAKAIISAIRDPDAN-GKTYALVGPNRYLLHDLVEYIYAVAHR- 290
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRP------GLFNLDEINAYTSDTIVSDNAL 297
PF VP+PLPRP LF ++ +T+ V
Sbjct: 291 ------PF----------------VPYPLPRPLFHLAAQLFAMNPFEPWTTPDKVDRFHT 328
Query: 298 T---------FQDLGIVPHKLKGYPTEYLIWYRK 322
T +DLGI ++ E L +R+
Sbjct: 329 TDMKYPGLPGLEDLGITASSVEQKAIEILRRHRR 362
>gi|388852305|emb|CCF54116.1| probable NADH2 dehydrogenase (ubiquinone) 40K chain [Ustilago
hordei]
Length = 392
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 184/322 (57%), Gaps = 24/322 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG + TVFG TGFLGRYVV +LA+ GSQV++P+R ED+ RHLK+MGDLGQ+VPM+++ R
Sbjct: 64 SGHVVTVFGCTGFLGRYVVNRLAQKGSQVIIPYRD-EDEKRHLKVMGDLGQVVPMEWDLR 122
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+D I+ + ++VV NL GR YET+N++F DV+ A+RIA IA E G+ RFI +S L
Sbjct: 123 NDEQIEECVRHSDVVYNLTGRHYETKNFTFNDVHATGAQRIAQIA-EAAGVGRFIHVSHL 181
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A ++SPS +KA E AV R ATI+RP M G EDR LN+ A + +
Sbjct: 182 NADANSPSAFLRSKAEGEAAVKRAFEGATIVRPGTMWGHEDRFLNQMAVYPYAWR----V 237
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM-----YDTI 240
G TR++PV+ +DVA A+ L+ D TSMG + L GP +T+ ++ +L+ +
Sbjct: 238 NHGQTRMRPVHSLDVAHALEKMLEADVTSMGATFSLAGPKEYTIGQILQLVESLTFTSLV 297
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDE-INAYTSDTIVSDNALTF 299
+ + K F +A +A +P+ P DE + Y D ++
Sbjct: 298 KPGLNTPKFAFKLAAKIA-------DLAWWPMISP-----DEVVRRYIDDKADEPGTKSW 345
Query: 300 QDLGIVPHKLKGYPTEYLIWYR 321
DL I P L+ YL YR
Sbjct: 346 ADLAITPDTLEDTAAPYLRRYR 367
>gi|157423514|gb|AAI53423.1| Ndufa9 protein [Danio rerio]
Length = 380
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 186/334 (55%), Gaps = 43/334 (12%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG+ ATVFG TGFLGRYVV +L +MGSQV++P+R + D +L+ MGDLGQI+ M+++PR
Sbjct: 54 SGLAATVFGATGFLGRYVVNRLGRMGSQVVIPYRCDQYDLMYLRPMGDLGQIIFMEWDPR 113
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I+ ++ +NVVINL+GRE+ET NY +EDV + +IA +E GI +FI +S L
Sbjct: 114 NKESIQRAISHSNVVINLVGREWETSNYKYEDVFVSIPLQIARATRE-AGIKKFIHMSHL 172
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPS+ KA EEAV E P A IM+P+ + G EDR LN +A PL
Sbjct: 173 NADIRSPSKYLRNKAVGEEAVRNEFPDAIIMKPSELFGREDRFLNHFANMRWFGTAVPLI 232
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G + QPV+VVDVA A+ A++D + GK Y L GP+ + +H+L E +Y
Sbjct: 233 AMGKKTVKQPVHVVDVAKAIINAIQDPEAN-GKTYALVGPNRYLLHDLVEYLYSVAHR-- 289
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL----------------DEINAYTS 288
PF +P+PLPRP L++L D+++ +
Sbjct: 290 -----PF----------------MPYPLPRP-LYHLVARFFEMNPFEPWTTRDKVDRLHT 327
Query: 289 DTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRK 322
+ + +DLGI P ++ E L +R+
Sbjct: 328 SDLKYPDLPGLEDLGITPASIEQKAIETLRRHRR 361
>gi|46249713|gb|AAH68378.1| Ndufa9 protein, partial [Danio rerio]
Length = 374
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 186/334 (55%), Gaps = 43/334 (12%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG+ ATVFG TGFLGRYVV +L +MGSQV++P+R + D +L+ MGDLGQI+ M+++PR
Sbjct: 48 SGLAATVFGATGFLGRYVVNRLGRMGSQVVIPYRCDQYDLMYLRPMGDLGQIIFMEWDPR 107
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I+ ++ +NVVINL+GRE+ET NY +EDV + +IA +E GI +FI +S L
Sbjct: 108 NKESIQRAISHSNVVINLVGREWETSNYKYEDVFVSIPLQIARATRE-AGIKKFIHMSHL 166
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPS+ KA EEAV E P A IM+P+ + G EDR LN +A PL
Sbjct: 167 NADIRSPSKYLRNKAVGEEAVRNEFPDAIIMKPSELFGREDRFLNHFANMRWFGTAVPLI 226
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G + QPV+VVDVA A+ A++D + GK Y L GP+ + +H+L E +Y
Sbjct: 227 AMGKKTVKQPVHVVDVAKAIINAIQDPEAN-GKTYALVGPNRYLLHDLVEYLYSVAHR-- 283
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL----------------DEINAYTS 288
PF +P+PLPRP L++L D+++ +
Sbjct: 284 -----PF----------------MPYPLPRP-LYHLVARFFEMNPFEPWTTRDKVDRLHT 321
Query: 289 DTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRK 322
+ + +DLGI P ++ E L +R+
Sbjct: 322 SDLKYPDLPGLEDLGITPASIEQKAIETLRRHRR 355
>gi|166158023|ref|NP_001107421.1| uncharacterized protein LOC100135261 [Xenopus (Silurana)
tropicalis]
gi|156229986|gb|AAI52140.1| Ndufa9 protein [Danio rerio]
gi|163916162|gb|AAI57548.1| LOC100135261 protein [Xenopus (Silurana) tropicalis]
Length = 380
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 186/334 (55%), Gaps = 43/334 (12%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG+ ATVFG TGFLGRYVV +L +MGSQV++P+R + D +L+ MGDLGQI+ M+++PR
Sbjct: 54 SGLAATVFGATGFLGRYVVNRLGRMGSQVVIPYRCDQYDLMYLRPMGDLGQIIFMEWDPR 113
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I+ ++ +NVVINL+GRE+ET NY +EDV + +IA +E GI +FI +S L
Sbjct: 114 NKESIQRAISHSNVVINLVGREWETSNYKYEDVFVSIPLQIARPTRE-AGIKKFIHMSHL 172
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPS+ KA EEAV E P A IM+P+ + G EDR LN +A PL
Sbjct: 173 NADIRSPSKYLRNKAVGEEAVRNEFPDAIIMKPSELFGREDRFLNHFANMRWFGTAVPLI 232
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G + QPV+VVDVA A+ A++D + GK Y L GP+ + +H+L E +Y
Sbjct: 233 AMGKKTVKQPVHVVDVAKAIINAIQDPEAN-GKTYALVGPNRYLLHDLVEYLYSVAHR-- 289
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL----------------DEINAYTS 288
PF +P+PLPRP L++L D+++ +
Sbjct: 290 -----PF----------------MPYPLPRP-LYHLVARFFEMNPFEPWTTRDKVDRLHT 327
Query: 289 DTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRK 322
+ + +DLGI P ++ E L +R+
Sbjct: 328 SDLKYPDLPGLEDLGITPASIEQKAIETLRRHRR 361
>gi|71003724|ref|XP_756528.1| hypothetical protein UM00381.1 [Ustilago maydis 521]
gi|46095692|gb|EAK80925.1| hypothetical protein UM00381.1 [Ustilago maydis 521]
Length = 392
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 129/317 (40%), Positives = 180/317 (56%), Gaps = 14/317 (4%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG + TVFG TGFLGRYVV +LA+ GSQV+VP+R ED+ RHLK+MGDLGQ+VPM+++ R
Sbjct: 64 SGHVVTVFGCTGFLGRYVVNRLAQKGSQVIVPYRD-EDEKRHLKVMGDLGQVVPMEWDLR 122
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D I+ + ++VV NL GR YET+N++F DV+ A+RIA IA E G+ RFI +S L
Sbjct: 123 HDEQIEECVRHSDVVYNLTGRHYETKNFTFNDVHVTGAQRIAQIA-EASGVGRFIHVSHL 181
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A ++SPS +KA E V R ATI+RP M G EDR LN+ A + +
Sbjct: 182 NADANSPSAFLRSKAEGEAVVKRAFEGATIVRPGTMWGHEDRFLNQMAVYPYAWR----V 237
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G T+++PV+ +DVA A+ L+ D TSMG + L GP +T+ ++ +L+ Y
Sbjct: 238 NQGQTKMRPVHSLDVAHALEKMLEADVTSMGATFSLAGPKEYTIGQILQLVESLT--YTS 295
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDE-INAYTSDTIVSDNALTFQDLGI 304
VK K V + +P+ P DE + Y D + ++ DL I
Sbjct: 296 LVKPGLNTPKFVMKLAAKVADLAWWPMISP-----DEVVRRYIDDLPDAPGTKSWADLAI 350
Query: 305 VPHKLKGYPTEYLIWYR 321
P L+ YL YR
Sbjct: 351 SPDTLEETAAPYLRRYR 367
>gi|387915632|gb|AFK11425.1| Ndufa9 protein [Callorhinchus milii]
Length = 380
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 132/333 (39%), Positives = 186/333 (55%), Gaps = 41/333 (12%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SGI+ATVFG TGFLGRYVV +L ++GSQ+++P+R D HLK MGDLGQI + ++
Sbjct: 53 FSGIVATVFGATGFLGRYVVNRLGRIGSQIVIPYRCDPYDTMHLKPMGDLGQITLLHWDA 112
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD ++I+ + +NVVINL+GRE+ET NY FEDVN + +IA A+E G+ +FI IS
Sbjct: 113 RDKDSIRRAVENSNVVINLVGREWETWNYKFEDVNINIPRQIALAARE-AGVEKFIHISH 171
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L A+ S S++ TKA E+ V E P A I++P+ + G EDR LN +A PL
Sbjct: 172 LNANIKSISKLLRTKAVGEQVVREEFPDAVILKPSELFGREDRFLNYFANMRWFGAAVPL 231
Query: 185 FGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
G G + QPVYVVDVA A+ +A+K + + GK Y + GP+ + +H+L E ++
Sbjct: 232 IGMGKKTVKQPVYVVDVAKAIVSAIK-EADANGKSYAIVGPNRYLLHDLVEYVF------ 284
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRP------GLFNLDEINAYTSDTIVSDNAL 297
AVA I +PLPRP F L+ +TS + +
Sbjct: 285 ------------AVAHRSFI-----SYPLPRPFYHLIARFFELNPFEPWTSRDKLDRFHI 327
Query: 298 T---------FQDLGIVPHKLKGYPTEYLIWYR 321
T +DLGI P L+ E L +R
Sbjct: 328 TDMKYPDLPGLEDLGITPTPLEQNVLEVLRRHR 360
>gi|326429413|gb|EGD74983.1| hypothetical protein PTSG_07208 [Salpingoeca sp. ATCC 50818]
Length = 341
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/316 (38%), Positives = 182/316 (57%), Gaps = 10/316 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGF+GRYVV +L K+GSQV+VPFRG E D RHL++ GDLGQI + F
Sbjct: 23 SGVVATVFGATGFMGRYVVNRLGKVGSQVVVPFRGDEHDYRHLRVAGDLGQIHFLPFQLL 82
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D +T++ + +NVVINLIG++ ++R++S EDV+ A IA AKE G+ R I +S L
Sbjct: 83 DKDTVRRAVEHSNVVINLIGQDTDSRHFSLEDVHVTGALNIAEAAKE-AGVERLIHMSAL 141
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA +S SR +KA EEAV P ATI+RP+ + G EDR LN++A PLF
Sbjct: 142 GADKTSNSRFLQSKALGEEAVASVFPSATIIRPSHIFGYEDRFLNRFAGLRVLPCGQPLF 201
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G + PVY +DVA + AA+ D + G ++E GP +T+ E+ + R+
Sbjct: 202 DGGKAKKSPVYSLDVADGIAAAVGDP-IAEGSVFEFVGPREYTMKEIVTFINQITRKPNK 260
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ VP +A+P L + LP + + ++I YT D V+ + L + + +
Sbjct: 261 TIHVP----SMLALP----LTRFSDKLPVDPIISTEDILRYTKDDEVTADTLRLEHMDVK 312
Query: 306 PHKLKGYPTEYLIWYR 321
++ +L +R
Sbjct: 313 GTDMEAVALGFLRRFR 328
>gi|443896253|dbj|GAC73597.1| NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Pseudozyma
antarctica T-34]
Length = 385
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/322 (40%), Positives = 184/322 (57%), Gaps = 24/322 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG + TVFG TGFLGRYVV +LA+ GSQV++P+R ED+ RHLK+MGDLGQIVPM+++ R
Sbjct: 57 SGHVVTVFGCTGFLGRYVVNRLAQKGSQVIIPYRD-EDEKRHLKVMGDLGQIVPMEWDLR 115
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+D I+ + ++VV NL GR YET+N+SF DV+ A+RIA IA E G+ R I +S L
Sbjct: 116 NDEQIEECVRHSDVVYNLTGRHYETKNFSFNDVHVAGAQRIAQIA-ESAGVGRLIHVSHL 174
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A + SPS +KA E AV R ATI+RP M G EDR LN+ A + +
Sbjct: 175 NADADSPSSFLRSKAEGEAAVKRAFEGATIVRPGTMWGHEDRFLNQMAVYPYAWR----V 230
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD---TIRE 242
G T+++PV+ +DVA A+ L+ D TSMG + L GP +T+ ++ +L+ T
Sbjct: 231 NHGQTKMRPVHSLDVAQALEKMLEADVTSMGATFSLAGPKEYTIGQILQLVESLTFTSLA 290
Query: 243 YP--HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDE-INAYTSDTIVSDNALTF 299
P + K F +A +A +P+ P DE + Y +D + ++
Sbjct: 291 KPGLNTPKFAFKLAAKIA-------DLAWWPMISP-----DEVVRRYINDKPDAPGTKSW 338
Query: 300 QDLGIVPHKLKGYPTEYLIWYR 321
DL + P L+ YL YR
Sbjct: 339 ADLAMTPDTLEDTAAPYLRRYR 360
>gi|47221864|emb|CAF98876.1| unnamed protein product [Tetraodon nigroviridis]
Length = 380
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
I ATVFG TGFLGRYVV +L ++GSQV++P R + D +L+ MGDLGQI+ M+++ R+
Sbjct: 57 IAATVFGATGFLGRYVVNRLGRIGSQVVIPHRCDQYDIMYLRPMGDLGQIIFMEWDARNQ 116
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
++IK + ++VVINL+GRE+ETRNY FEDV + ++IA A+E G +F+ IS L A
Sbjct: 117 DSIKRALEHSDVVINLVGREWETRNYGFEDVFVTIPQKIAKAARE-AGTTKFVHISHLNA 175
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
SPS+ KA E AV E P A IM+P+ M G EDR N +A N PL
Sbjct: 176 DIRSPSKYLRNKAVGETAVRDEFPDAIIMKPSEMFGREDRFFNHYANMSWFGNAIPLIAM 235
Query: 188 GSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G + QPVYVVDVA A+ +A++D + GK Y L GP+ + +H+L E +Y H
Sbjct: 236 GKKTVKQPVYVVDVAKAIISAIRDPDAN-GKTYALVGPNRYLLHDLVEYIYAV----AHR 290
Query: 247 VKVPFPVAKAVAMPREILLKKVPF-PLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
V +P+ + + PF P P D++ + + + +DLGI
Sbjct: 291 SFVAYPLPRPLYRLAAQFFAMNPFEPWTTP-----DKVERFHTTDMKYPGLPGLEDLGIT 345
Query: 306 PHKLKGYPTEYLIWYR 321
P ++ E L +R
Sbjct: 346 PSSVEQKAIEVLRRHR 361
>gi|164658469|ref|XP_001730360.1| hypothetical protein MGL_2742 [Malassezia globosa CBS 7966]
gi|159104255|gb|EDP43146.1| hypothetical protein MGL_2742 [Malassezia globosa CBS 7966]
Length = 340
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 187/318 (58%), Gaps = 16/318 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG IATVFG TGFLGRY+V +LAK+G+QV+VP+R ED+ RHLKL+GDLGQIVP++++ R
Sbjct: 9 SGSIATVFGATGFLGRYLVSKLAKVGTQVVVPYRD-EDEKRHLKLLGDLGQIVPLEWDIR 67
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ I + ++ V NL GR Y T+N+S DV+ A RIA IA + G+ RFI +S L
Sbjct: 68 NEQQIDECLRHSDTVFNLTGRNYATKNFSMRDVHVDGARRIAEIAAQ-AGVARFIHMSHL 126
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S S TKA E+AV + P ATI+RP+++ G EDR LNK A + +
Sbjct: 127 MADVDSESEYMRTKALGEDAVRKVFPSATIVRPSSIYGHEDRFLNKMASWPITWK----L 182
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+G T ++PV+ +DVA A+ + D +MG+ + L GP +T+ EL +++ E
Sbjct: 183 NNGQTVLRPVHSLDVAEALLVISQQDRLAMGETFSLYGPKAYTIRELLQIV-----ENIT 237
Query: 246 YVKVPFPVAKAVAMPREIL--LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
Y K+ V+ V +PR + + K+ + +FN DE+ + + + +F DL
Sbjct: 238 YQKI---VSPDVNIPRFMFSAIAKLGEKIAWWPMFNQDEVTRRFINEVPAPGTKSFADLD 294
Query: 304 IVPHKLKGYPTEYLIWYR 321
I P L+ YL +R
Sbjct: 295 IAPDVLEDVAIMYLRRFR 312
>gi|57529307|ref|NP_001006281.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Gallus gallus]
gi|53136628|emb|CAG32643.1| hypothetical protein RCJMB04_31o2 [Gallus gallus]
Length = 378
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 192/334 (57%), Gaps = 44/334 (13%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV +L ++GSQV++P+R + D +L+ MGDLGQ++ ++++ +
Sbjct: 53 SGIVATVFGATGFLGRYVVNRLGRIGSQVIIPYRCDQYDLMYLRPMGDLGQLLFLEWDCK 112
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++ + + +NVVINL+G+E+ET+N+SFED + + IA I +E G+ I IS L
Sbjct: 113 DKDSTRRAVEHSNVVINLVGKEWETKNFSFEDEFVNIPKSIAQITRE-AGVETLIHISHL 171
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS SPS+ +KA E+AV E P A IM+P+ M G EDR LN +A ++ F PL
Sbjct: 172 NASMKSPSKYLRSKAVGEKAVREEFPDAVIMKPSEMFGREDRFLNHYAN-MRWFGGVPLI 230
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G + QPVYVVDVA A+ A+KD GK Y L GP+ + ++++ E +Y
Sbjct: 231 SLGKKTVKQPVYVVDVAKAIINAVKDPDAK-GKTYALVGPNRYLLYDMIEYIY------- 282
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL----------------DEINAYTS 288
AVA K P+PLPRP L++L D+++ + +
Sbjct: 283 -----------AVA-----FRKFFPYPLPRP-LYHLIARFFEISPFEPWLTRDKVDRFHT 325
Query: 289 DTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRK 322
++ + +DLGI P L+ E L +R+
Sbjct: 326 TDMILPDLPGLEDLGIQPTPLEQRAIEVLRRHRR 359
>gi|209732928|gb|ACI67333.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Salmo salar]
gi|223647086|gb|ACN10301.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Salmo salar]
gi|223672959|gb|ACN12661.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Salmo salar]
Length = 380
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 174/315 (55%), Gaps = 41/315 (13%)
Query: 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
+ ATVFG TGFLGRYVV +L +MGSQ+++P R + D +L+ MGDLGQI+ M+++ R+
Sbjct: 56 VAATVFGATGFLGRYVVNRLGRMGSQIVIPHRCDQYDLMYLRPMGDLGQIIFMEWDARNK 115
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
++I+ +A +NVVINL+GRE+ET+NY FED + ++IA +E GI + I +S L A
Sbjct: 116 DSIREALAHSNVVINLVGREWETKNYPFEDTYVSIPQQIAKATRE-AGITKLIHVSHLNA 174
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
SPS+ KA E+AV E P A IM+PA M G EDR N +A + PL
Sbjct: 175 DIRSPSKYLRNKAVGEKAVREEFPDAIIMKPAEMFGREDRFFNHFANMRWFGSAVPLISM 234
Query: 188 GSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G + QPV+VVDVA A+ A+KD + GK Y L GP+ + +H+L E +Y
Sbjct: 235 GKKTVKQPVHVVDVAKAIINAIKDPDAN-GKTYALVGPNRYLLHDLVEYVYAVAHR---- 289
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRP------GLFNLDEINAYTSDTIVSDNALT-- 298
PF VP+PLPRP F ++ +T+ V T
Sbjct: 290 ---PF----------------VPYPLPRPLYHLVASFFAMNPFEPWTTPDKVDRFHTTDM 330
Query: 299 -------FQDLGIVP 306
+DLGIVP
Sbjct: 331 KYPGLPGLEDLGIVP 345
>gi|449282261|gb|EMC89125.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Columba livia]
Length = 370
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 188/322 (58%), Gaps = 20/322 (6%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV +L ++GSQV++P+R D +L+ MGDLGQ++ ++++ +
Sbjct: 45 SGIVATVFGATGFLGRYVVNRLGRIGSQVIIPYRCDRYDLMYLRPMGDLGQLLFLEWDCK 104
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D +TI+ + +NVVINL+G+E+ET+N+ +EDV + + IA IA+E G+ I IS L
Sbjct: 105 DKDTIRRALEHSNVVINLVGKEWETKNFKYEDVFVNIPQNIAQIARE-AGVETLIHISHL 163
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS SPS+ +KA E AV + P A I++P+ M G EDR LN +A ++ F PL
Sbjct: 164 NASMKSPSKYLRSKAVGERAVREKFPDAIILKPSEMYGREDRFLNHYAN-MRWFGGVPLI 222
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD----TI 240
G + QP+YVVDVA A+ A+KD GK Y L GP+ + ++++ E +Y T
Sbjct: 223 SLGKKTVKQPIYVVDVAKAIINAIKDPDAK-GKTYALAGPNRYLLYDIVEYIYSVCYRTF 281
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
YP +P P+ VA EI P D+++ + + + + +
Sbjct: 282 LPYP----LPRPLYHLVARFFEI--------NPFEPWITRDKVDRFHTTDMTFPDLPGLE 329
Query: 301 DLGIVPHKLKGYPTEYLIWYRK 322
DLGI P L+ E L +R+
Sbjct: 330 DLGIQPTPLEQKAIEVLRRHRR 351
>gi|358054225|dbj|GAA99675.1| hypothetical protein E5Q_06378 [Mixia osmundae IAM 14324]
Length = 386
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/320 (40%), Positives = 182/320 (56%), Gaps = 17/320 (5%)
Query: 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKF 62
+ ++G +ATVFG TGFLGRY+V +LAK G+QV++P+R ED+ RHLK+MGDLGQIVPM++
Sbjct: 56 HSFTGHVATVFGCTGFLGRYLVHKLAKKGTQVIIPYRD-EDEKRHLKVMGDLGQIVPMEW 114
Query: 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
+ R+D+ I+ + ++VV NL+GR+YET+N+ F +V+ A RIA IA + G+ R I +
Sbjct: 115 DIRNDSQIEEAVRHSDVVYNLVGRDYETKNFKFHEVHIDGARRIASIA-QLAGVSRLIHV 173
Query: 123 SCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
S L A SPS V KA EEAV P ATI+RP M G EDRLLN A + F
Sbjct: 174 SHLNADPDSPSAVLRCKAEGEEAVKNAFPSATIVRPGWMYGHEDRLLNTLA----VYPFI 229
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
D T I+PV+V+DVA A+ A + D ++ G+ + L GP +T +L L R
Sbjct: 230 FRINDQQTVIKPVHVLDVAEAM-AIMLDAESTAGQTFSLPGPQEYTYEQLIALAES--RT 286
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN-AYTSDTIVSDNALTFQD 301
Y P M R + + V +P P DEI + D + L++
Sbjct: 287 YTKLQGANLPKWAMSLMTR--VWENVWWPTLSP-----DEITRRFLDDKDNAAGTLSWDY 339
Query: 302 LGIVPHKLKGYPTEYLIWYR 321
LG+ P +L Y YR
Sbjct: 340 LGMTPDQLADLSIVYFRRYR 359
>gi|148230575|ref|NP_001082699.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
[Xenopus laevis]
gi|32484269|gb|AAH54183.1| MGC64316 protein [Xenopus laevis]
Length = 377
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/334 (39%), Positives = 188/334 (56%), Gaps = 44/334 (13%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRY+V +L ++GSQV++P+R D +L+ MGDLGQ++ M +N +
Sbjct: 52 SGVVATVFGATGFLGRYLVNRLGRVGSQVVIPYRCEPYDIMYLRPMGDLGQLIFMDWNAK 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D +TI+ + +NVVINLIG+E+ET+N+S+EDV + +A +A+E G+ +FI +S L
Sbjct: 112 DKDTIRKALENSNVVINLIGKEWETKNFSYEDVFVNIPRDLALLARE-AGVEKFIHMSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPS+ KA E AV P A IM+P+ M G EDR N +A ++ F PL
Sbjct: 171 NADLKSPSKYLRNKAVGEAAVREAFPDAIIMKPSEMYGREDRFFNHYAN-MRWFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G + QPVYVVDVA A+ A+ D S GK Y L GP+ + +H+L E ++
Sbjct: 230 AFGKKTVKQPVYVVDVAKAILNAIHDP-ESNGKTYALAGPNRYLLHDLVEYVFAVAHR-- 286
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD----EINAY----TSDTI----V 292
PF VP+P+PRP L+ L EIN + T D +
Sbjct: 287 -----PF----------------VPYPIPRP-LYRLIARFFEINPFEPWITRDKLDRFHT 324
Query: 293 SDNALT----FQDLGIVPHKLKGYPTEYLIWYRK 322
+D +DLGIVP ++ E L +R+
Sbjct: 325 TDKKFPDLPGLEDLGIVPVSVEQKAIEVLRRHRR 358
>gi|326912578|ref|XP_003202626.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Meleagris gallopavo]
Length = 399
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 189/318 (59%), Gaps = 12/318 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV +L ++GSQV++P+R + D +L+ MGDLGQ++ ++++ +
Sbjct: 74 SGIVATVFGATGFLGRYVVNRLGRIGSQVIIPYRCDQYDLMYLRQMGDLGQLLFLEWDCK 133
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++ + + +NVVINLIG+E+ET+N+SFED + + IA I +E G+ I IS L
Sbjct: 134 DKDSTRRAVEHSNVVINLIGKEWETKNFSFEDEFVNIPKSIAQITRE-AGVETLIHISHL 192
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS SPS+ +KA E+AV E P A IM+P+ M G EDR LN +A ++ F PL
Sbjct: 193 NASMKSPSKYLRSKAVGEKAVREEFPDAIIMKPSEMFGREDRFLNHYAN-MRWFGGVPLI 251
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G T QPVYVVDVA A+ A+KD + GK Y L GP+ + ++++ E +Y
Sbjct: 252 SLGKKTMKQPVYVVDVAKAIINAVKDP-DAKGKTYALAGPNRYLLYDMIEYIYAV----A 306
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+ P+P+ + + + PF P L D+++ + + + + +DLGI
Sbjct: 307 YRTFFPYPLPRPLYHLIARFFEMSPF---EPWL-TRDKVDRFHTTDMTLPDLPGLEDLGI 362
Query: 305 VPHKLKGYPTEYLIWYRK 322
P L+ E L +R+
Sbjct: 363 QPTSLEQKAIEVLRRHRR 380
>gi|28278769|gb|AAH45076.1| MGC64316 protein, partial [Xenopus laevis]
Length = 380
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/334 (39%), Positives = 188/334 (56%), Gaps = 44/334 (13%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRY+V +L ++GSQV++P+R D +L+ MGDLGQ++ M +N +
Sbjct: 55 SGVVATVFGATGFLGRYLVNRLGRVGSQVVIPYRCEPYDIMYLRPMGDLGQLIFMDWNAK 114
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D +TI+ + +NVVINLIG+E+ET+N+S+EDV + +A +A+E G+ +FI +S L
Sbjct: 115 DKDTIRKALENSNVVINLIGKEWETKNFSYEDVFVNIPRDLALLARE-AGVEKFIHMSHL 173
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPS+ KA E AV P A IM+P+ M G EDR N +A ++ F PL
Sbjct: 174 NADLKSPSKYLRNKAVGEAAVREAFPDAIIMKPSEMYGREDRFFNHYAN-MRWFGGVPLI 232
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G + QPVYVVDVA A+ A+ D S GK Y L GP+ + +H+L E ++
Sbjct: 233 AFGKKTVKQPVYVVDVAKAILNAIHDP-ESNGKTYALAGPNRYLLHDLVEYVFAVAHR-- 289
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD----EINAY----TSDTI----V 292
PF VP+P+PRP L+ L EIN + T D +
Sbjct: 290 -----PF----------------VPYPIPRP-LYRLIARFFEINPFEPWITRDKLDRFHT 327
Query: 293 SDNALT----FQDLGIVPHKLKGYPTEYLIWYRK 322
+D +DLGIVP ++ E L +R+
Sbjct: 328 TDKKFPDLPGLEDLGIVPVSVEQKAIEVLRRHRR 361
>gi|393230765|gb|EJD38366.1| NAD(P)-binding protein [Auricularia delicata TFB-10046 SS5]
Length = 390
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 192/334 (57%), Gaps = 26/334 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G IATVFG TGFLGRY+V +LAK G+QV+VP+R ED RHL++MGDLGQ+VP++F+ R
Sbjct: 42 TGQIATVFGCTGFLGRYLVAKLAKAGTQVVVPYRD-EDKKRHLRVMGDLGQVVPLEFDAR 100
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ I+ + +++V NL+GR+YET+N+ + VN A+RIA ++ G+ RF+ +S L
Sbjct: 101 NEAQIEECVRHSHIVYNLVGRDYETKNFDYNAVNVAAAQRIAEVSA-RVGVPRFVHVSHL 159
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ SPS + TKA EEAV P ATI+RPAAM G ED+LLNK ++ F
Sbjct: 160 NANFDSPSEFYRTKALGEEAVRDVFPDATIIRPAAMFGWEDKLLNKLYRWPIWFK----L 215
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL----MYDTIR 241
G TR++PV+V+DVA A+ + + ++ + L GP T + L EL +Y+ +
Sbjct: 216 NGGETRVRPVHVMDVAQALKNLI--ERPALAETLSLPGPKTHTYNYLLELVASVLYEPMT 273
Query: 242 EYPHYVKVPFPVAKAVA-----------MPREILLKKVPFPLPRPGLFNLDEINAYTSDT 290
P VP PVA A+A P E+ + + L P L++ +
Sbjct: 274 RAP---TVPKPVALALASAAQYAYFPMISPDEVRRRYIDDELALPAQRALEDWESPEDVK 330
Query: 291 IVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
+ + +GIVP +++ Y YL YR G
Sbjct: 331 PAQEAPGDWDKVGIVPEEIEQYALLYLRQYRTIG 364
>gi|156365559|ref|XP_001626712.1| predicted protein [Nematostella vectensis]
gi|156213599|gb|EDO34612.1| predicted protein [Nematostella vectensis]
Length = 372
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 179/292 (61%), Gaps = 16/292 (5%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++G+ ATVFG TGFLGRYV+ +L ++G+Q+ VP+RG E D RHL+LMGDLGQI F+
Sbjct: 43 FNGVSATVFGATGFLGRYVINRLGRVGTQLTVPYRGDEHDIRHLRLMGDLGQIDFFDFHL 102
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D+ +I + +NVV+NLIGR +ETRN++FE+V+ A IA AKE G+ R I +S
Sbjct: 103 KDEESIAKMVKHSNVVVNLIGRGFETRNFNFEEVHVDGARTIAKAAKE-AGVERLIHVSA 161
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L A+ SPS+ TKA E+AV E P ATI+RP + G ED+ LN +A PL
Sbjct: 162 LNAAVDSPSKFLHTKALGEQAVREEFPNATILRPGTVFGHEDKFLNYYAYLRSLPLGIPL 221
Query: 185 FGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR-E 242
G +T+ PVYV DVA ++ A+K++ S+G+ +EL GP + ++++ + +Y ++
Sbjct: 222 IEGGMNTKKMPVYVADVAQSILEAIKEE-ASVGQTFELVGPSEYYLYDIIDYIYRVMKCN 280
Query: 243 YPHYVKVPFPVAKAVA-----------MPREILLKKVPFPLPRPGLFNLDEI 283
+ HY VP + +A + R++L ++ PGL L+++
Sbjct: 281 FKHYT-VPRKAYELMAWGFEWSIFNPRLTRDMLYRQFQSDALTPGLPGLEDL 331
>gi|340383427|ref|XP_003390219.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Amphimedon queenslandica]
Length = 367
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/227 (49%), Positives = 143/227 (62%), Gaps = 14/227 (6%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG +ATVFG TGF GRY+V +L ++GSQ++ P+RG E D RHL+ MGDLGQI+ FN
Sbjct: 42 FSGTVATVFGCTGFCGRYIVNRLGQVGSQIVAPYRGDEHDYRHLRPMGDLGQILFRSFNL 101
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD ++ T+ +NVV+N IGR+YETRN+ F+DV H R+ A + G+ R I S
Sbjct: 102 RDPESVTKTLEYSNVVVNAIGRDYETRNFKFDDV-HVQGSRVIAEAAKKAGVKRLIHFSA 160
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
LGAS SPS+ +KAA EEAV P ATI+RPAA+ G EDR N A KF FPL
Sbjct: 161 LGASKDSPSKFLQSKAAGEEAVREVFPDATIIRPAAIYGREDRYFNLCA----KFKVFPL 216
Query: 185 -------FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP 224
+G G + PV VVDVA AV + D GT+ G YEL GP
Sbjct: 217 GRVPLMNYGHGIYKY-PVSVVDVAKAVVQIIADQGTA-GTTYELVGP 261
>gi|327273277|ref|XP_003221407.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Anolis carolinensis]
Length = 380
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 184/318 (57%), Gaps = 12/318 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV +L ++GSQV++P+R + D +L+ MGDLGQ++ M+++
Sbjct: 54 SGVVATVFGATGFLGRYVVNRLGRIGSQVVIPYRCDQYDLMYLRPMGDLGQLLFMEWDSH 113
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIG+E+ETRN+ +EDV + IA +++E G+ + I IS L
Sbjct: 114 DKDSIRRALEYSNVVINLIGKEWETRNFKYEDVFVNIPRNIAQLSRE-AGVEKLIHISHL 172
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPS+ KA E V E P A I++P+ M G EDR N +A + F PL
Sbjct: 173 NADVKSPSKYLRNKAIGERVVREEFPDAIILKPSEMFGREDRFFNHYAN-MHWFGGVPLI 231
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G + QP+YV DVA A+ +A+KD GK Y L GP + +++L + +Y +
Sbjct: 232 AFGRKTVKQPIYVSDVAKAIISAIKDPDAK-GKTYTLTGPHRYLLYDLVQYLYAVL---- 286
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
H V +P+P+ + + + PF D+I+ + + + N +DLG+
Sbjct: 287 HRVYLPYPLPRPIYHLIARFFEMNPF----EPWTTRDKIDRFHTTDMRFPNLPGLEDLGV 342
Query: 305 VPHKLKGYPTEYLIWYRK 322
VP ++ E L +RK
Sbjct: 343 VPTPVELKAIEVLRRHRK 360
>gi|58332714|ref|NP_001011432.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 [Xenopus
(Silurana) tropicalis]
gi|56971758|gb|AAH88072.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
[Xenopus (Silurana) tropicalis]
Length = 377
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 187/334 (55%), Gaps = 44/334 (13%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG +GFLGRYVV +L ++GSQV++P+R D +L+ MGDLGQ++ M ++ +
Sbjct: 52 SGVVATVFGASGFLGRYVVNRLGRIGSQVIIPYRCDPYDIMYLRPMGDLGQLIFMDWDSK 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D +TI+ + +NVVINLIG+E+ET+N+S+EDV + +A +A+E G+ +FI +S L
Sbjct: 112 DKDTIRKALQNSNVVINLIGKEWETKNFSYEDVFVNIPRDLALLARE-AGVEKFIHMSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL- 184
A SPS+ KA E+AV P A IM+P+ + G EDR N +A ++ F PL
Sbjct: 171 NADLKSPSKYLRNKAVGEDAVREAFPDAIIMKPSEIYGREDRFFNHYAN-MRWFGGVPLI 229
Query: 185 -FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
FG S + QPVYVVDVA A+ A+ D S GK Y L GP+ + +H+L E ++
Sbjct: 230 AFGKKSVK-QPVYVVDVAKAILNAIHDP-ESKGKTYALVGPNRYLLHDLVEYIFAVTHR- 286
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRP------GLFNLDEINAYTSDTIVSDNAL 297
PF VP+P+PRP F ++ +T+ V
Sbjct: 287 ------PF----------------VPYPIPRPLYRLISRFFEINPFEPWTTRDKVDRFHT 324
Query: 298 T---------FQDLGIVPHKLKGYPTEYLIWYRK 322
T +DLGIVP ++ E L +R+
Sbjct: 325 TDKKFPDLPGLEDLGIVPTSVEQKGIEVLRRHRR 358
>gi|320170520|gb|EFW47419.1| Ndufa9 protein [Capsaspora owczarzaki ATCC 30864]
Length = 324
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 159/250 (63%), Gaps = 2/250 (0%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG+TGF+GRY+V +L ++GSQ+++P+RG E RHLK MGDLGQ ++ R
Sbjct: 77 SGVVATVFGSTGFIGRYLVNRLGRVGSQLILPYRGDEHAYRHLKPMGDLGQFSFPFYHLR 136
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D +T+K + +NVV NL+G+E+ TRN+S DV+ AE IA +E G+ R I +S L
Sbjct: 137 DKDTVKRLVEHSNVVFNLVGQEFATRNFSLHDVHVTGAETIARACQE-AGVGRLIHVSAL 195
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS+ S S +KA E+AVL P ATI+RPA + G EDRL N+ + ++ PL
Sbjct: 196 NASTESRSPFLQSKALGEQAVLAAFPNATIIRPATLFGPEDRLFNRLSVPMRTPFGVPLQ 255
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G TR QP+YVVDVA A+ A+++ T+ GK +EL GP +T +L + M D R
Sbjct: 256 NYGETRKQPIYVVDVARALIRAMEER-TTAGKTFELVGPKEYTTAQLLQYMCDMARRPMR 314
Query: 246 YVKVPFPVAK 255
VP +A+
Sbjct: 315 AFHVPSEIAE 324
>gi|410907479|ref|XP_003967219.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Takifugu rubripes]
Length = 382
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 181/316 (57%), Gaps = 11/316 (3%)
Query: 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
I ATVFG TGFLGRYVV +L ++GSQV++P R + D +L+ MGDLGQI+ M+++ ++
Sbjct: 58 IAATVFGATGFLGRYVVNRLGRVGSQVVLPHRCDQYDIMYLRPMGDLGQIIFMEWDAKNK 117
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
++IK + ++VVINL+GRE+ETRNY FEDV + ++IA A+E GI +F+ IS L A
Sbjct: 118 DSIKRALEHSDVVINLVGREWETRNYGFEDVFVTIPQQIAKAARE-AGITKFVHISHLNA 176
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
SPS+ KA E AV E P A IM+P+ M G EDR N +A N PL
Sbjct: 177 DIRSPSKYLRNKAVGETAVRDEFPDAIIMKPSEMFGREDRFFNHYANMSWFGNAIPLISM 236
Query: 188 GSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G + QPV VVDVA A+ A++D + GK Y L GP+ + +++L E +Y T+ P +
Sbjct: 237 GKKTVKQPVCVVDVAKAIINAIRDPDAN-GKTYALVGPNRYLLYDLVEYIY-TVAHRP-F 293
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ P P P L+ +V P D++ + + + +DLGI P
Sbjct: 294 LAYPLP------RPLYRLVAQVFAMNPFEPWITPDKVERFHTTDMKYPELPGLEDLGITP 347
Query: 307 HKLKGYPTEYLIWYRK 322
++ E L YRK
Sbjct: 348 SSVEQKAIEILRRYRK 363
>gi|331237468|ref|XP_003331391.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
gi|309310381|gb|EFP86972.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
Length = 386
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 184/319 (57%), Gaps = 17/319 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G++ATVFG TGFLGRY+V +LAK G+QV+VP+R ED RHL++MGDLGQIVP++F+
Sbjct: 57 TGLVATVFGATGFLGRYLVHKLAKQGTQVIVPYRD-EDSKRHLRVMGDLGQIVPLEFDLE 115
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ I + ++VV NL+GRE+ET+NYSF+ + A +I IAKE+ G+ R I +S L
Sbjct: 116 NEGFINECVRHSHVVYNLLGREHETKNYSFDRLFIEGASKITRIAKEN-GVGRLIHVSHL 174
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS SPS+++ KAA E V P ATI++P+ M G EDR LNK K F F
Sbjct: 175 NASLDSPSKLYKAKAAGESVVRDIFPEATIVKPSIMFGQEDRFLNKMV--TKPFTF--QV 230
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY-- 243
T ++PV V+DVA A+ D T+ GK +EL GP +T EL +++ +
Sbjct: 231 NRLETLVRPVSVLDVAEAMQLMSTADSTA-GKTFELAGPRTYTHEELFQVLEVLTHKSLT 289
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTI-VSDNALTFQDL 302
P ++ +P P+ K L+K V + P L + + D + ++ F
Sbjct: 290 PSFINLPLPIFK-------FLMKIVDKAVWWPTLSEDEIVRRCIDDKLELTKGCYGFDYF 342
Query: 303 GIVPHKLKGYPTEYLIWYR 321
GI P ++ YL +YR
Sbjct: 343 GIEPDAVENLAITYLRYYR 361
>gi|291392701|ref|XP_002712902.1| PREDICTED: NADH dehydrogenase-like [Oryctolagus cuniculus]
Length = 377
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/332 (37%), Positives = 182/332 (54%), Gaps = 42/332 (12%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQI+ +++N R
Sbjct: 52 SGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQIIFLEWNGR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINL+GRE+ETRN+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRAVQHSNVVINLVGREWETRNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA E+AV P ATI++P+ + G EDR LN +A ++ F PL
Sbjct: 171 NADIKSSSRYLRNKAVGEKAVRDVFPEATIIKPSDIFGREDRFLNHFAN-IRWFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G + QPVYVVDV+ + A+K D + GK + GP+ +++ +L + +Y
Sbjct: 230 SLGKKTVKQPVYVVDVSKGIVNAVK-DADARGKTFVFTGPNRYSLFDLVQYIYAVAHR-- 286
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPR------PGLFNLDEINAYTSDTIVSDNALT 298
PF +P+PLP LF + +T+ V N +T
Sbjct: 287 -----PF----------------LPYPLPHFAYRMIARLFEISPFEPWTTRDKVERNHIT 325
Query: 299 ---------FQDLGIVPHKLKGYPTEYLIWYR 321
+DLGI L+ E L +R
Sbjct: 326 DKTLPHLPGLEDLGIQATPLELKAIEVLRRHR 357
>gi|323507922|emb|CBQ67793.1| probable NADH2 dehydrogenase (ubiquinone) 40K chain [Sporisorium
reilianum SRZ2]
Length = 392
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 152/231 (65%), Gaps = 6/231 (2%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG + TVFG TGFLGRY+V +LA+ G+QV++P+R ED+ RHLK+MGDLGQIVPM+++ R
Sbjct: 64 SGHVVTVFGCTGFLGRYLVNRLAQKGTQVIIPYRD-EDEKRHLKVMGDLGQIVPMEWDLR 122
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D I+ + ++VV NL+GR YET+N++F DV+ A+RIA IA E G+ RFI +S L
Sbjct: 123 HDEQIEECVRHSDVVYNLVGRHYETKNFTFNDVHVTGAQRIAQIA-ESAGVGRFIHVSHL 181
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A ++SPS +KA E V R ATI+RP + G EDR LN+ A + +
Sbjct: 182 NADANSPSAFLRSKAEGEAVVKRAFEGATIVRPGTLWGHEDRFLNQMAVYPYAWR----V 237
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
G T+++PV+ DVA A+ L+ D TSMG + L GP +T+ ++ +L+
Sbjct: 238 NHGQTKMRPVHSFDVAHALEKMLEADVTSMGATFSLAGPKEYTIGQILQLV 288
>gi|389744576|gb|EIM85758.1| NADH dehydrogenase [Stereum hirsutum FP-91666 SS1]
Length = 379
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 186/326 (57%), Gaps = 22/326 (6%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G +ATVFG TGFLGRY+V +LAK G+QV+VP+R ED+ RHLK+MGDLGQIVP++++ R
Sbjct: 47 TGHVATVFGCTGFLGRYLVSKLAKAGTQVVVPYRD-EDEKRHLKVMGDLGQIVPLEWDIR 105
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+N I+ + +++V NL GREY+T+ +S DVN A RIA +A G+ RF+ +S L
Sbjct: 106 SENQIEECLRHSDIVYNLTGREYDTKRFSLHDVNSTGAGRIASVAAR-AGVPRFVHVSHL 164
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS SPSR + KA EE V P ATI+RPA M G EDRLL Q + + +
Sbjct: 165 NASRDSPSRFYQAKAEGEELVHDAFPNATIIRPATMYGYEDRLL----QNMAVWPIWWKL 220
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G TRI+PV+V+DVA A+T + S+ L GP T + +L+ P
Sbjct: 221 NHGRTRIRPVHVMDVAQALTNLISI--PSLPGTLSLPGPSTLTYAYILDLISTVTYNAPS 278
Query: 246 YVK-VPFPVAKAVAMPREILLKKVPFPLPRPGLFN---LDEINA---YTSDTIVSDNAL- 297
VP PVA +A + + V +P+ P LD++ A Y + + AL
Sbjct: 279 RAPVVPKPVANLLAK----VSQNVWWPVISPDEVTRRYLDDVGAGAEYAEEK--DEKALG 332
Query: 298 TFQDLGIVPHKLKGYPTEYLIWYRKG 323
+ +G+VP +++ + YL YR
Sbjct: 333 DWDKVGVVPDEMENHAITYLRRYRSA 358
>gi|229366480|gb|ACQ58220.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Anoplopoma fimbria]
Length = 381
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 181/332 (54%), Gaps = 43/332 (12%)
Query: 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
I ATVFG TGF+GRYVV +L +MGSQ++VP R + D +L+ MGDLGQI+ M ++ R+
Sbjct: 57 IAATVFGATGFIGRYVVNRLGRMGSQIVVPHRCDQYDIMYLRPMGDLGQIIFMDWDARNK 116
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
++IK + +NVVINL+GRE+ET NY +EDV + ++IA A+E GI +F+ +S L A
Sbjct: 117 DSIKRALENSNVVINLVGREWETSNYHYEDVFVTIPQQIAKAARE-AGITKFVHMSHLNA 175
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
S S+ KA E AV E P A IM+P+ + G EDR N +A N PL
Sbjct: 176 DIRSQSKYLRNKAVGETAVRDEFPEAIIMKPSEIFGREDRFFNYYANMRWFGNAVPLISM 235
Query: 188 GSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G + QPV+VVDVA A+ A++D + GK Y L GP+ + +H+L E +Y
Sbjct: 236 GKKTVKQPVHVVDVAKAIINAVRDPDAN-GKTYALVGPNRYLLHDLVEYIYAVAHR---- 290
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL----------------DEINAYTSDT 290
PF VP+PLPRP L++L D+++ + +
Sbjct: 291 ---PF----------------VPYPLPRP-LYHLGARFFAMNPFEPWTTADKVDRFHATD 330
Query: 291 IVSDNALTFQDLGIVPHKLKGYPTEYLIWYRK 322
+ +DLGI P ++ E L +R+
Sbjct: 331 MKYPGLPGLEDLGITPSTVEQKAIEILRRHRR 362
>gi|46397823|sp|P25284.2|NDUA9_NEUCR RecName: Full=NADH-ubiquinone oxidoreductase 40 kDa subunit,
mitochondrial; AltName: Full=Complex I-40kD;
Short=CI-40kD; Flags: Precursor
Length = 375
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 185/319 (57%), Gaps = 17/319 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V++PFR E + RHLK+ GDLG++V ++F+ R+
Sbjct: 51 GHTATVFGATGQLGRYIVNRLARQGCTVVIPFRD-EYNKRHLKVTGDLGKVVMIEFDLRN 109
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NLIGR+Y T+N+SFEDV+ AERIA ++ + RFI +S
Sbjct: 110 TQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAEAVAKY-DVDRFIHVSSYN 168
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +S F+TKA E+ V P TI+RPA M G EDRLL+K A VK L
Sbjct: 169 ADPNSECEFFATKARGEQVVRSIFPETTIVRPAPMFGFEDRLLHKLAS-VKNI----LTS 223
Query: 187 DG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+G + PV+V+DV A+ L DD T+ + +EL GP +T E++E++ I +
Sbjct: 224 NGMQEKYNPVHVIDVGQALEQMLWDDNTA-SETFELYGPKTYTTAEISEMVDREIYKRRR 282
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+V VP + K +A +L K + +P + + DEI D ++ A TF+DLGI
Sbjct: 283 HVNVPKKILKPIAG---VLNKALWWP-----IMSADEIEREFHDQVIDPEAKTFKDLGIE 334
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P + + YL YR
Sbjct: 335 PADIANFTYHYLQSYRSNA 353
>gi|336467425|gb|EGO55589.1| NADH/ubiquinone oxidoreductase [Neurospora tetrasperma FGSC 2508]
gi|350287932|gb|EGZ69168.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
[Neurospora tetrasperma FGSC 2509]
Length = 375
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 185/319 (57%), Gaps = 17/319 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V++PFR E + RHLK+ GDLG++V ++F+ R+
Sbjct: 51 GHTATVFGATGQLGRYIVNRLARQGCTVVIPFRD-EYNKRHLKVTGDLGKVVMIEFDLRN 109
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NLIGR+Y T+N+SFEDV+ AERIA ++ + RFI +S
Sbjct: 110 TQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAEAVAKY-DVDRFIHVSSYN 168
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +S F+TKA E+ V P TI+RPA M G EDRLL+K A VK L
Sbjct: 169 ADPNSECEFFATKARGEQVVRSIFPETTIVRPAPMFGFEDRLLHKLAS-VKNI----LTS 223
Query: 187 DG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+G + PV+V+DV A+ L DD T+ + +EL GP +T E++E++ I +
Sbjct: 224 NGMQEKYNPVHVIDVGQALEQMLWDDNTA-SETFELYGPKTYTTAEISEMVDREIYKRRR 282
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+V VP + K +A +L K + +P + + DEI D ++ A TF+DLGI
Sbjct: 283 HVNVPKKILKPIAG---VLNKALWWP-----IMSADEIEREFHDQVIDPEAKTFKDLGIE 334
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P + + YL YR
Sbjct: 335 PADIANFTYHYLQSYRSNA 353
>gi|318037573|ref|NP_001187320.1| mitochondrial NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
subunit 9 [Ictalurus punctatus]
gi|308322709|gb|ADO28492.1| mitochondrial NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
subunit 9 [Ictalurus punctatus]
Length = 380
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 176/322 (54%), Gaps = 41/322 (12%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG+ ATVFG TGFLGRYVV +L ++GSQ+++P R + D +L+ MGDLGQI+ M+++
Sbjct: 53 FSGVAATVFGATGFLGRYVVNRLGRIGSQIVIPHRCDQYDLMYLRPMGDLGQIIFMEWDV 112
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D +IK ++ +NVVINL+GRE+ET NY +EDV + ++IA ++E G+ +FI +S
Sbjct: 113 KDKESIKRAISHSNVVINLVGREWETSNYKYEDVFVTIPQQIAKASRE-AGVSKFIHVSH 171
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L A SPS+ KA E V E P A IM+P+ + G EDR N +A PL
Sbjct: 172 LNADIRSPSKYLRNKAVGETVVRDEFPDAIIMKPSELFGREDRFFNHFANMRWFGKAIPL 231
Query: 185 FGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
G + QP +VVDVA A+ A+KD + GK Y L GP+ + +H+L E +Y
Sbjct: 232 IAMGKKTVKQPCHVVDVAKAIVNAIKDPDAN-GKTYALVGPNRYLLHDLVEYVYAVAHR- 289
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRP------GLFNLDEINAYTSDTIVSDNAL 297
PF V +P+PRP F ++ +T+ V L
Sbjct: 290 ------PF----------------VAYPMPRPLYHLVARFFEMNPFEPWTTRDKVDRFHL 327
Query: 298 T---------FQDLGIVPHKLK 310
T F+DLGI P ++
Sbjct: 328 TDMQYPDLPGFEDLGITPSSVE 349
>gi|3046|emb|CAA39695.1| 40 kD subunit of NADH dehydrogenase [Neurospora crassa]
Length = 375
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 185/319 (57%), Gaps = 17/319 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V++PFR E + RHLK+ GDLG++V ++F+ R+
Sbjct: 51 GHTATVFGATGQLGRYIVNRLARQGCTVVIPFRD-EYNKRHLKVTGDLGKVVMIEFDLRN 109
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NLIGR+Y T+N+SFEDV+ AERIA ++ + RFI +S
Sbjct: 110 TQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAERVAKY-DVDRFIHVSSYN 168
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +S F+TKA E+ V P TI+RPA M G EDRLL+K A VK L
Sbjct: 169 ADPNSECEFFATKARGEQVVRSIFPETTIVRPAPMFGFEDRLLHKLAS-VKNI----LTS 223
Query: 187 DG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+G + PV+V+DV A+ L DD T+ + +EL GP +T E++E++ I +
Sbjct: 224 NGMQEKYNPVHVIDVGQALEQMLWDDNTA-SETFELYGPKTYTTAEISEMVDREIYKRRR 282
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+V VP + K +A +L K + +P + + DEI D ++ A TF+DLGI
Sbjct: 283 HVNVPKKILKPIAG---VLNKALWWP-----IMSADEIEREFHDQVIDPEAKTFKDLGIE 334
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P + + YL YR
Sbjct: 335 PADIANFTYHYLQSYRSNA 353
>gi|323456187|gb|EGB12054.1| hypothetical protein AURANDRAFT_20714 [Aureococcus anophagefferens]
Length = 394
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 175/337 (51%), Gaps = 28/337 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG+ +FG GFLGRYV ++ K+G++V V RGCE + RHLK+ D GQ ++ R
Sbjct: 58 SGVRCALFGGIGFLGRYVCSEMGKIGTRVRVGNRGCELEARHLKVSFDHGQFHAPFYSAR 117
Query: 66 DDNTIKATMAKANVVINLIGREYETR---------------NYSFEDVNHFMAERIAGIA 110
D+ +I + +ANVV+N++G+ YETR NYS+E+VN A R
Sbjct: 118 DEASIAEVIGRANVVVNMVGKYYETRNVVPTKRADGAYSNVNYSYEEVN-VDAARAIARQ 176
Query: 111 KEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLN 170
+ G F+ +S + A + SPS TKAA E AVL E P ATI+RP + G EDRLLN
Sbjct: 177 AKAAGAAGFVHVSAMAADAKSPSEWARTKAAGEAAVLEEFPEATIVRPCTLFGWEDRLLN 236
Query: 171 KWAQFVK-KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTV 229
+A PL DG++ +QPVY VDVA + D G++ ELGGP +T
Sbjct: 237 WFAGIAGMPGALVPLVDDGASVLQPVYAVDVAKVINQITLDPTKYAGQVVELGGPAEYTR 296
Query: 230 HELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSD 289
ELAE +D ++ V VP +A A + P P ++ DE+ T D
Sbjct: 297 RELAEFTFDVTKQKATLVPVPAQLADFAAG----FMNLAPSP-----MWTRDEVALETVD 347
Query: 290 TIVSDNA--LTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
+V LTF D GI P ++ YL YR+GG
Sbjct: 348 VVVPPGTPNLTFADFGIAPTPIEKIAFSYLHRYREGG 384
>gi|374293238|ref|YP_005040273.1| putative NAD-dependent epimerase/dehydratase [Azospirillum
lipoferum 4B]
gi|357425177|emb|CBS88060.1| putative NAD-dependent epimerase/dehydratase [Azospirillum
lipoferum 4B]
Length = 323
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 171/300 (57%), Gaps = 10/300 (3%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
Y + TVFG +GF+GR+++++LA+ G+Q+ + R LK G +GQIVP +
Sbjct: 3 YRTQVITVFGGSGFIGRHLIRRLARSGAQIRIATRN-PGKATFLKTAGAVGQIVPFATDC 61
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D ++ + A++VINL+G YE + SF+ V H A G+ R IQIS
Sbjct: 62 TKDESVARAVQGADIVINLLGVLYERGSQSFQGV-HVDAAARIARLAAANGVNRLIQISA 120
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GA ++SPS +KAA E+AVL P ATI+RP+ + G ED NK+A +K PL
Sbjct: 121 IGADANSPSSYARSKAAGEQAVLSAFPAATILRPSIVFGPEDNFFNKFAAMAQKAPALPL 180
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G TR QPVYV ++A AV AAL+ D S GK YELGGP +++ EL EL I+ +
Sbjct: 181 IGGGKTRFQPVYVGNLADAVVAALESD-DSRGKTYELGGPRVYSFRELLELTQKDIQRHR 239
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
V +P+ +A+++A L+KVP P D++ D +VS AL F+DLGI
Sbjct: 240 PLVTIPWNIAESLAG----FLEKVPVLAP---ALTRDQVALLRQDNVVSPTALGFKDLGI 292
>gi|195997701|ref|XP_002108719.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190589495|gb|EDV29517.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 358
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 152/235 (64%), Gaps = 5/235 (2%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
YSGI+ATVFG TGF GRYV+ +L ++G+Q++VP+R E D RH++LMGDLGQI+ F+
Sbjct: 47 YSGILATVFGGTGFTGRYVINRLGRVGTQIMVPYRCDEHDIRHIRLMGDLGQIMFRPFSL 106
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD + + + +NVVINLIG+++ETRNY++ED N A IA ++H G+ R I +S
Sbjct: 107 RDTDAVSELVKHSNVVINLIGQDWETRNYTYEDANVEGARAIARACRDH-GVERLIHVSA 165
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L +S S +KAA EEAVL E P ATI+RP+ + G EDR N +A+ PL
Sbjct: 166 LNVDKNSKSHWLRSKAAGEEAVLEEFPDATIVRPSDIYGQEDRFFNYYAELRMLPFGVPL 225
Query: 185 FGDG--STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G +T+I P+YV D A A+ DD T+ G+IYEL GP + +++L ++
Sbjct: 226 LDGGLKATKI-PLYVADFAKAIAKMTVDD-TTAGRIYELYGPHEYLLYDLVGTIF 278
>gi|308322229|gb|ADO28252.1| mitochondrial NADH dehydrogenase 1 alpha subcomplex subunit 9
[Ictalurus furcatus]
Length = 380
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 175/322 (54%), Gaps = 41/322 (12%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG+ ATVFG TGFLGRYVV +L ++GSQ+++P R + D +L+ MGDLGQI+ M+++
Sbjct: 53 FSGVAATVFGATGFLGRYVVNRLGRIGSQIVIPHRCDQYDLMYLRPMGDLGQIIFMEWDV 112
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D +IK +A +NVVINL+GRE+ET NY +EDV + ++IA ++E G+ +FI +S
Sbjct: 113 KDKESIKRAIAHSNVVINLVGREWETSNYKYEDVFVTIPQQIAKASRE-AGVSKFIHVSH 171
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
A SPS+ KA E V E P A IM+P+ + G EDR N +A PL
Sbjct: 172 PNADIRSPSKYLRNKAVGETVVRDEFPDAIIMKPSELFGREDRFFNHFANMRWFGKATPL 231
Query: 185 FGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
G + QP +VVDVA A+ A+KD + GK Y L GP+ + +H+L E +Y
Sbjct: 232 IAMGKKTVKQPCHVVDVAKAIVNAIKDPDAN-GKTYALVGPNRYLLHDLVEYVYAVAHR- 289
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRP------GLFNLDEINAYTSDTIVSDNAL 297
PF V +P+PRP F ++ +T+ V L
Sbjct: 290 ------PF----------------VAYPMPRPLYHLVVRFFEMNPFEPWTTRDKVDRFHL 327
Query: 298 T---------FQDLGIVPHKLK 310
T F+DLGI P ++
Sbjct: 328 TDMQYPDLPGFEDLGITPSSVE 349
>gi|336272906|ref|XP_003351208.1| hypothetical protein SMAC_03511 [Sordaria macrospora k-hell]
gi|380092728|emb|CCC09481.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 375
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 184/320 (57%), Gaps = 19/320 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V++PFR E + RHLK+ GDLG++V ++F+ R+
Sbjct: 51 GHTATVFGATGQLGRYIVNRLARQGCTVIIPFRD-EYNKRHLKVTGDLGKVVMIEFDLRN 109
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NLIGR+Y T+N+SFEDV+ AERIA ++ + RFI +S
Sbjct: 110 TQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAEAVAKY-DVDRFIHVSSYN 168
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQF--VKKFNFFPL 184
A S S F+TKA E V P ATI+RPA M G EDRLL+K A + N+
Sbjct: 169 ADPKSASEFFATKARGEHVVRSIFPEATIVRPAPMFGFEDRLLHKLASVKNILTSNWM-- 226
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
+ PV+V+DV A+ L DD T+ + +EL GP ++ E++E++ I +
Sbjct: 227 ----QEKYNPVHVIDVGQALEQMLFDDNTA-SETFELYGPKTYSTAEISEMVDREIYKKR 281
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+V VP + K +A ++ K + +P + + DEI D ++ +A TF+DLGI
Sbjct: 282 RHVNVPKRILKPIAG---VVNKALWWP-----IMSADEIEREFHDQVIDPSAKTFKDLGI 333
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + + YL YR
Sbjct: 334 EPADIANFTYHYLQSYRSNA 353
>gi|354467247|ref|XP_003496081.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Cricetulus griseus]
gi|344242401|gb|EGV98504.1| hypothetical protein I79_001369 [Cricetulus griseus]
Length = 377
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 156/249 (62%), Gaps = 8/249 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDTMHLRPMGDLGQLIFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ETRN+ FED+ + + IA +KE G+ R I +S L
Sbjct: 112 DKDSIRRAVQHSNVVINLIGRDWETRNFDFEDIFVKIPQAIAQASKE-AGVERLIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS S SR KA E+ V R P ATI+RP+ + G EDR LN +A ++ F PL
Sbjct: 171 NASMKSSSRYLRNKAVGEKEVRRLFPEATIIRPSDIFGREDRFLNHFAN-IRWFIGVPLI 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G T QPVYVVDV+ + A+KD + GK + GP+ + + L + +Y
Sbjct: 230 SLGFKTVKQPVYVVDVSKGIINAVKDP-DARGKTFAFAGPNRYLLFHLVQYVYGM----A 284
Query: 245 HYVKVPFPV 253
H +P+P+
Sbjct: 285 HRTFIPYPL 293
>gi|432862508|ref|XP_004069890.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Oryzias latipes]
Length = 381
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/331 (37%), Positives = 177/331 (53%), Gaps = 41/331 (12%)
Query: 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
I ATVFG TGFLGRYVV +L +MGSQ+++P R + D + + MGDLGQI+ ++++ ++
Sbjct: 57 ISATVFGATGFLGRYVVNRLGRMGSQIIIPHRCDQYDLMYFRPMGDLGQIIFLEWDSKNK 116
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
++IK + +NVVINL+GRE+ETRN+SF+DV + +++A KE GI +FI +S L A
Sbjct: 117 DSIKRALEHSNVVINLVGREWETRNFSFQDVFVTIPQQLARATKE-AGISKFIHLSHLNA 175
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
SPS+ KA E+ V E P A IM+P+ M G EDR N +A N PL
Sbjct: 176 DIRSPSKYLRNKAVGEQVVREEFPDAIIMKPSEMFGREDRFFNYFANMRWFGNAIPLMAL 235
Query: 188 GSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G + QPVYV DV A+ A +D + GK + L GP+ + +H+L E +Y
Sbjct: 236 GKKTVKQPVYVADVGKAIINAARDPDAN-GKTFALVGPNRYLLHDLVEYIYAVAHR---- 290
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRP------GLFNLDEINAYTSDTIVSDNALT-- 298
PF VP+PLPRP F L+ +T+ V T
Sbjct: 291 ---PF----------------VPYPLPRPLYHLAAQFFALNPFEPWTTPDKVDRFHTTDM 331
Query: 299 -------FQDLGIVPHKLKGYPTEYLIWYRK 322
+DLGI + ++ E L +R+
Sbjct: 332 KYPELPGLEDLGITANSVEQKAIEILRRHRR 362
>gi|334348210|ref|XP_001372251.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Monodelphis domestica]
Length = 377
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 151/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV+VP+R D +L+ MGDLGQI+ +++N +
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCEPYDFTYLRPMGDLGQIIFLEWNSK 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINL+GR++ETRN+ F DV + E IA +AKE G+ FI +S L
Sbjct: 112 DKSSIQRALEHSNVVINLVGRDWETRNFDFTDVFADIPESIAQLAKE-AGVETFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S S+ KA E+AV P A I++PA + G EDRLLN +A + F PL
Sbjct: 171 NADIKSTSKYLRNKAVGEKAVREAFPEAIILKPADIFGREDRLLNYFAN-NRWFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVYVVDV+ A+ A+KD S GK Y + GP+ + +H+ + ++
Sbjct: 230 SMGKKTVKQPVYVVDVSRAIVNAIKDPD-SRGKTYAITGPNRYLLHDFVQYIF 281
>gi|395538753|ref|XP_003771339.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Sarcophilus harrisii]
Length = 377
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 153/233 (65%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV+VP+R D +L+ MGDLGQI+ +++N +
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCEPYDFTYLRPMGDLGQIIFLEWNAK 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINL+GR++ET+N+ F DV + E IA +AK + G+ FI +S L
Sbjct: 112 DKSSIQRALEHSNVVINLVGRDWETKNFDFSDVFAVIPETIAQLAK-NAGVETFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA ++AV P A IM+P+ + G EDRLLN +A ++ F PL
Sbjct: 171 NADIKSTSRYLRNKAVGDKAVREVFPEAIIMKPSDIFGREDRLLNHFAN-IRWFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVYVVDV+ A+ A+KD + GK Y L GP+ + +++L + ++
Sbjct: 230 SLGKKTVKQPVYVVDVSKAIINAIKDPD-AQGKTYALTGPNRYLLYDLVQYIF 281
>gi|149712374|ref|XP_001494651.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Equus caballus]
Length = 377
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 151/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV L +MGSQV+VP+R D HL+ MGDLGQI+ +++N R
Sbjct: 52 SGVVATVFGATGFLGRYVVNHLGRMGSQVMVPYRCDTYDTMHLRPMGDLGQIIFLEWNGR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ ++I+ + +NVVINL+GRE+ET+N+ FEDV + IA ++KE G+ +FI +S L
Sbjct: 112 NKDSIRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPLAIAQVSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA E+ V P ATI++PA + G EDR LN +A ++ F PL
Sbjct: 171 NADIKSSSRYLRNKAVGEKEVRNAFPEATIIKPADIFGREDRFLNHFAN-IRSFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVYVVDV+ + A+KD ++ GK + GP+ + + +L + +Y
Sbjct: 230 SLGKKTVKQPVYVVDVSKGIINAIKDP-SARGKTFVFVGPNRYVLFDLVQYVY 281
>gi|335773127|gb|AEH58289.1| mitochondrial NADH dehydrogenase (ubiquinone) 1 alph subcomplex
subunit 9-like protein [Equus caballus]
Length = 377
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 151/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV L +MGSQV+VP+R D HL+ MGDLGQI+ +++N R
Sbjct: 52 SGVVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCDTYDTMHLRPMGDLGQIIFLEWNGR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ ++I+ + +NVVINL+GRE+ET+N+ FEDV + IA ++KE G+ +FI +S L
Sbjct: 112 NKDSIRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPLAIAQVSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA E+ V P ATI++PA + G EDR LN +A ++ F PL
Sbjct: 171 NADIKSSSRYLRNKAVGEKEVRNAFPEATIIKPADIFGREDRFLNHFAN-IRSFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVYVVDV+ + A+KD ++ GK + GP+ + + +L + +Y
Sbjct: 230 SLGKKTVKQPVYVVDVSKGIINAIKDP-SARGKTFVFVGPNRYVLFDLVQYVY 281
>gi|156042508|ref|XP_001587811.1| hypothetical protein SS1G_11051 [Sclerotinia sclerotiorum 1980]
gi|154695438|gb|EDN95176.1| hypothetical protein SS1G_11051 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 345
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 179/319 (56%), Gaps = 15/319 (4%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G ATVFG TGFLGRY+V +LAK G V+VPFR E RHLK+ GDLG+++ M+++ R
Sbjct: 17 AGHTATVFGATGFLGRYIVNRLAKQGCTVIVPFRE-EMAKRHLKVSGDLGRVIFMEYDLR 75
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +++ ++ ++VV NL+GR Y T+N+ EDV+ AERIA ++ + RFI +S
Sbjct: 76 NTQSLEESVRHSDVVYNLVGRNYPTKNFDLEDVHVEGAERIADAVAKY-DVDRFIHVSSY 134
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A +SPS + TKA E V P TI+RPA + G EDRLL+K A F +
Sbjct: 135 NADPNSPSEFYRTKARGEAVVRSIFPETTIVRPAPLFGFEDRLLHKLAGFTNVLTSNHM- 193
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
R PV+ DV A+ L+DD T+ + YEL GP ++ E+A L+ I
Sbjct: 194 ---QERYWPVHAPDVGQALEKMLQDDNTA-SQTYELYGPKNYSTAEIAALVDREINSRRR 249
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
++ +P + K +A E+L K + +P + + DE+ D + +A TF+DLGI
Sbjct: 250 HINLPKKILKPIA---EVLNKALWWP-----VLSGDEVEREFIDQKIDPSAKTFKDLGIE 301
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P +L YL+ YR
Sbjct: 302 PAELSSLTFHYLLGYRSAA 320
>gi|392572330|gb|EIW65481.1| hypothetical protein TREMEDRAFT_72592 [Tremella mesenterica DSM
1558]
Length = 411
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 188/341 (55%), Gaps = 32/341 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG + TVFG TGFLGRY V ++AK G+QV+VP+R ED+ RHL++MGDLGQIVPM+++ R
Sbjct: 58 SGNVVTVFGCTGFLGRYTVAKIAKQGAQVIVPYRD-EDEKRHLRVMGDLGQIVPMEWDAR 116
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ + I + ++ V NL GR++ET+N++FED+N A IA +A + + R I +S L
Sbjct: 117 NPDQIYECVKHSDTVYNLAGRDWETKNFTFEDINVKAAGLIARVAAQ-ANVPRLIHVSHL 175
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS SS S + TK A E AV P ATI+RPA M G ED LLN AQ+ F F
Sbjct: 176 NASPSSTSEFYRTKYAGERAVREAFPEATIVRPAGMYGAEDWLLNAIAQYPILFK----F 231
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYP 244
G T+I PV+V+DVA+A++ L TS+ + L GP + T + L L T+R
Sbjct: 232 NQGRTKILPVHVLDVASALSVMLTAPVTSVASTFALPGPAMHTFNSLFALTSAMTMRPVS 291
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSD--------------T 290
+VP VAK V+ I+ + + +P+ P I+ ++ T
Sbjct: 292 GVPEVPKAVAKLVS---SIIHRAIWWPVISPDEIERKFIDDMGTELFASPGEEKPSGWAT 348
Query: 291 IVSDNAL--------TFQDLGIVPHKLKGYPTEYLIWYRKG 323
SD A+ + DL I P ++ + +YL YR
Sbjct: 349 SRSDGAVGIDGEPVKGWADLDISPDYIEEHAIKYLRRYRSA 389
>gi|388581995|gb|EIM22301.1| NAD(P)-binding protein [Wallemia sebi CBS 633.66]
Length = 378
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 185/317 (58%), Gaps = 15/317 (4%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G +ATVFG TGFLGRY+VQ++A+ G+QV+VP+R E + RHLK+MGDLGQIVPM+++ R
Sbjct: 49 TGHVATVFGCTGFLGRYLVQKIARTGAQVVVPYRD-EMEKRHLKVMGDLGQIVPMEWDAR 107
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ I + ++VV NL+GR++ET+N+S+EDV+ +A IA IA + GI R I +S
Sbjct: 108 RPDQIAECLRHSDVVYNLVGRDHETKNFSYEDVHTKVASDIASIATQE-GIERLIHVSHF 166
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ SPS + K A E+ V ATI+RP+ M G EDR L + A + +
Sbjct: 167 NAAHDSPSAFYRAKQAGEDLVRENFDGATIVRPSTMYGHEDRFLQQMAFWTIAYK----L 222
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYP 244
+G TR++P +V+DVA A+ + D S G Y L GP +T +E +++ T++E+
Sbjct: 223 NNGQTRVKPAHVLDVAEALHKMMTLDPGS-GDTYSLPGPKEYTYNEAIDVVSSLTLKEH- 280
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
VP P+AKAVA LL +L+++ A + + ++ DL I
Sbjct: 281 KAPSVPKPIAKAVAQLMNRLLWWQSISEDEVERRHLNDLAA------IPEGHKSWNDLDI 334
Query: 305 VPHKLKGYPTEYLIWYR 321
+P ++ Y+ YR
Sbjct: 335 IPDYMEDVSIPYVRRYR 351
>gi|60688426|gb|AAH91192.1| Ndufa9 protein, partial [Rattus norvegicus]
Length = 370
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 182/317 (57%), Gaps = 12/317 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+LMGDLGQ++ ++++ R
Sbjct: 45 SGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDIYDTMHLRLMGDLGQLIFLEWDAR 104
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGRE+ETRN+ FEDV + IA +KE G+ RFI +S L
Sbjct: 105 DKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKE-AGVERFIHVSHL 163
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS S ++ +KA E+ V P A I+RP+ M G EDR LN +A + + F PL
Sbjct: 164 NASMKSSAKSLRSKAVGEKEVRTVFPDAIIIRPSDMFGREDRFLNHFANY-RWFLAVPLV 222
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G T QPVYV DV+ + A K+ ++GK + GP+ + + L + ++
Sbjct: 223 SLGFKTVKQPVYVADVSKGIANATKNPD-AIGKTFAFTGPNRYLLFHLVKYIFGMT---- 277
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
H +P+P+ + V L PF P ++ I + SD + +D +DLG+
Sbjct: 278 HRTFIPYPLPRFVYSWIGRLFGLSPFE-PWTTKDKVERI--HISDVMATDLP-GLEDLGV 333
Query: 305 VPHKLKGYPTEYLIWYR 321
P L+ E L +R
Sbjct: 334 QPTPLELKSIEVLRRHR 350
>gi|198278533|ref|NP_001094222.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Rattus norvegicus]
gi|317373396|sp|Q5BK63.2|NDUA9_RAT RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; AltName: Full=Sperm
flagella protein 3; Flags: Precursor
gi|149049372|gb|EDM01826.1| rCG30092 [Rattus norvegicus]
gi|197246398|gb|AAI68777.1| Ndufa9 protein [Rattus norvegicus]
Length = 377
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 182/317 (57%), Gaps = 12/317 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+LMGDLGQ++ ++++ R
Sbjct: 52 SGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDIYDTMHLRLMGDLGQLIFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGRE+ETRN+ FEDV + IA +KE G+ RFI +S L
Sbjct: 112 DKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKE-AGVERFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS S ++ +KA E+ V P A I+RP+ M G EDR LN +A + + F PL
Sbjct: 171 NASMKSSAKSLRSKAVGEKEVRTVFPDAIIIRPSDMFGREDRFLNHFANY-RWFLAVPLV 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G T QPVYV DV+ + A K+ ++GK + GP+ + + L + ++
Sbjct: 230 SLGFKTVKQPVYVADVSKGIANATKNPD-AIGKTFAFTGPNRYLLFHLVKYIFGMT---- 284
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
H +P+P+ + V L PF P ++ I + SD + +D +DLG+
Sbjct: 285 HRTFIPYPLPRFVYSWIGRLFGLSPFE-PWTTKDKVERI--HISDVMATDLP-GLEDLGV 340
Query: 305 VPHKLKGYPTEYLIWYR 321
P L+ E L +R
Sbjct: 341 QPTPLELKSIEVLRRHR 357
>gi|330797894|ref|XP_003286992.1| hypothetical protein DICPUDRAFT_97564 [Dictyostelium purpureum]
gi|325083015|gb|EGC36479.1| hypothetical protein DICPUDRAFT_97564 [Dictyostelium purpureum]
Length = 352
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 179/303 (59%), Gaps = 22/303 (7%)
Query: 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
++ATVFG TGF GRY+VQ LA+ G QV+VP+RG + R LK++GD+GQI+P++++ R++
Sbjct: 35 LVATVFGATGFTGRYIVQALARTGVQVVVPYRGEDWTFRDLKVLGDIGQIIPVRYDIRNE 94
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+I+ ++ +N+VINL GR Y+TRN+S +D+N AERIA I++ + R+I +S L A
Sbjct: 95 ESIERAISHSNIVINLAGRNYDTRNFSLQDINVDAAERIARISQ---NVDRYIYVSALNA 151
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
S + S TKA E+ + P ATI+RP+ + G EDR +NKW++ + + F P F +
Sbjct: 152 SEDASSEFARTKALGEKVSRKHNPKATIVRPSIIFGDEDRFINKWSKVSQNWPFIPRF-N 210
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
+IQP++ D A + + + ++ ++ K E G + FT + +++ I Y
Sbjct: 211 SEHKIQPLHCSDFAKGILSTI-ENPQAVAKTCEFAGDETFTWDQFLDMI---IEGTAQYD 266
Query: 248 KVPFPVA----KAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIV--SDNALTFQD 301
++ PV+ K VA P E R F +DEI+ + D +V + LT +D
Sbjct: 267 RLNLPVSTEFMKMVAGPME--------QFSRDPNFIVDEIDYHNQDLVVVPKKDVLTLKD 318
Query: 302 LGI 304
G+
Sbjct: 319 FGV 321
>gi|392591619|gb|EIW80946.1| NAD(P)-binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 362
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 184/321 (57%), Gaps = 24/321 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG + TVFG+TGFL RY++ +LA+ G+QV+VP+R ED RHLK MGDLGQIV M+++ R
Sbjct: 46 SGHVVTVFGSTGFLARYMISKLARQGTQVVVPYRE-EDTKRHLKPMGDLGQIVSMEWDLR 104
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+D+ I + +++V NL+GR+YET+N+ ++DV+ AERIA IA E G+ R + +S L
Sbjct: 105 NDDQIAECLRHSDIVYNLVGRDYETKNFKYDDVHVKGAERIAKIAAE-VGVQRLVHVSHL 163
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
ASSSS S + +KA EE V P ATI+RPAAM G ED+ N + + +
Sbjct: 164 NASSSSKSAFYRSKAEGEERVKAAFPNATIIRPAAMYGHEDKFFNN----MSNWPIWWKL 219
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G T+I+PV+V+DVA A+ + GT SM Y L GP T L +L+ P
Sbjct: 220 NHGETKIRPVHVMDVAQALANLM---GTPSMPGTYSLPGPRTMTYEYLLDLVSSVTYNPP 276
Query: 245 HYV-KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN-AYTSDTIVSDNALTFQDL 302
+P PVA A+A + V +P P DE+ Y SD+ V+ + F
Sbjct: 277 SGTPTLPKPVAMALAK----AAQNVWWPALSP-----DEVERRYISDSEVAGDWDAF--- 324
Query: 303 GIVPHKLKGYPTEYLIWYRKG 323
G+ P ++ + YL +R
Sbjct: 325 GVAPDAIEQHAITYLRRHRSA 345
>gi|392565904|gb|EIW59080.1| NADH dehydrogenase [Trametes versicolor FP-101664 SS1]
Length = 367
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 181/323 (56%), Gaps = 28/323 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G +ATVFG TGFLGRYVV +LAK G+QV+VP+R ED+ RHLK+ GDLGQIV M+++ R
Sbjct: 46 TGHVATVFGCTGFLGRYVVAKLAKAGTQVIVPYRD-EDEKRHLKVTGDLGQIVSMEWDLR 104
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ I + +++V NL+GREYET+N+S+EDV+ AE IA +A + G+ RF+ +S L
Sbjct: 105 RPDQIDECLRHSDIVYNLVGREYETKNFSYEDVHVKGAEAIASLATQ-AGVDRFVHVSHL 163
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ SPS + TKA EE V P ATI+RP+ M G EDRLLN A F+P++
Sbjct: 164 NAAHDSPSAFYRTKAVGEERVKEAFPNATIIRPSIMFGYEDRLLNNVA-------FWPIW 216
Query: 186 ---GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
T+++PV+ +DVA A+ ++ SM Y L GP T L L+
Sbjct: 217 WKLNHMRTKVRPVHALDVAQALANVIQ--IPSMPGTYNLPGPSEMTYEYLLTLVSTVTLN 274
Query: 243 YPHYVKVPFPVAKAVAMPREI--LLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
PV+ A +P+ + L KV + P L + + Y D V + +
Sbjct: 275 ---------PVSPAPILPKSVALALAKVAQRVWWPALSPDEVVRRYIDDADVPGD---WD 322
Query: 301 DLGIVPHKLKGYPTEYLIWYRKG 323
GI P +++ + YL YR
Sbjct: 323 KFGITPDEIEEHAITYLRRYRSA 345
>gi|335288570|ref|XP_003126608.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Sus scrofa]
Length = 377
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/248 (43%), Positives = 156/248 (62%), Gaps = 6/248 (2%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV+VP+R D HL+ MGDLGQI+ M++N +
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCEPYDTMHLRPMGDLGQIIFMEWNGK 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINL+GRE+ET+N+ FEDV + IA ++KE G+ + I IS L
Sbjct: 112 DKDSIRKVVEHSNVVINLVGREWETKNFDFEDVFVKIPHAIAQVSKE-AGVEKLIHISHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPSR +KA E+ V P ATI++P+ + G EDR LN +A ++ F PL
Sbjct: 171 NADIKSPSRYLRSKAVGEKEVRAAFPEATIIKPSDIFGREDRFLNYFAS-MRWFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G + QPVY+VDV+ + A+KD + GK + GP+ + + +L + ++ Y
Sbjct: 230 SLGKETVKQPVYIVDVSKGIINAIKDP-DAKGKTFAFVGPNRYLLFDLVQYIFAV--AYR 286
Query: 245 HYVKVPFP 252
++ P P
Sbjct: 287 PFLPYPLP 294
>gi|169858077|ref|XP_001835685.1| NADH dehydrogenase [Coprinopsis cinerea okayama7#130]
gi|116503361|gb|EAU86256.1| NADH dehydrogenase [Coprinopsis cinerea okayama7#130]
Length = 366
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 188/324 (58%), Gaps = 28/324 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG TVFG TGFLGRY+V +L K+G+QV+ P+R ED+ RHLKLMGDLGQIV M+++ R
Sbjct: 46 SGHTVTVFGCTGFLGRYLVSKLGKIGTQVVAPYRD-EDESRHLKLMGDLGQIVRMEWDLR 104
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+ +I + ++ VINL+GR+Y T+N+ F+ VN AERIA IA E+ G+ RFIQ+S L
Sbjct: 105 DEKSIAECLRHSDTVINLVGRDYTTKNFDFKQVNALGAERIAKIAAEN-GVSRFIQVSHL 163
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS +SPS+ +++KA E VL P ATI+RP+ + G ED+LL A +P++
Sbjct: 164 NASENSPSKFYASKAEGEARVLEAFPNATIVRPSILYGYEDKLLTNMA-------IWPIW 216
Query: 186 ---GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
+ T+I+P +V+DVA A+ +++ S G + L GP T L +L+ +
Sbjct: 217 WKLNNAETKIRPAHVMDVAQALVNLVRNPKVS-GTV-NLPGPSTLTYEYLLDLVSSVTLQ 274
Query: 243 YPHYVKVPFPVAKAVAMPREIL--LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
P +KA +PR + + K+ + P L + + Y +D+ V + +
Sbjct: 275 ---------PPSKAPTLPRIVAENIAKLGNAVWWPTLSPDEVVRRYINDSEVPGD---WD 322
Query: 301 DLGIVPHKLKGYPTEYLIWYRKGG 324
+ + P +++ + YL YR
Sbjct: 323 VVDVTPSEIEDHAITYLRRYRTAA 346
>gi|119472804|ref|XP_001258421.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Neosartorya fischeri NRRL 181]
gi|119406573|gb|EAW16524.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Neosartorya fischeri NRRL 181]
Length = 382
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 176/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VPFR E RHLK GDLG++V ++++ R+
Sbjct: 55 GHTATVFGATGFLGRYIVNKLANQGCTVVVPFRE-EMTKRHLKPTGDLGRVVFIEYDLRN 113
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+ DV+ ERIA ++ + RFI +S
Sbjct: 114 TQSIEESVRHSDVVYNLVGRQYPTKNFSYTDVHVDGTERIAEAVAKY-DVDRFIHVSSYN 172
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +SPS F TKA EE P TI+RPA M G ED LL+K A F +
Sbjct: 173 ADKNSPSEFFRTKAWGEEVARSIFPETTIVRPAPMFGFEDNLLHKLAGVTNLFTSNHM-- 230
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+V+DV +A+ L DD T+ G+ +EL GP ++ E+AEL+ I ++ +
Sbjct: 231 --QERFWPVHVIDVGSALELMLHDD-TTAGQTFELYGPKNYSTAEIAELVDREIVKHRRH 287
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP KAV P L K+ + + DE+ D + A TF+DLGI P
Sbjct: 288 INVP----KAVLKPMAYYLNKLLW----WHTISADEVEREFIDQKIDKTAKTFKDLGIEP 339
Query: 307 HKLKGYPTEYLIWYRKGG 324
+L YL YR
Sbjct: 340 AELSDLTFHYLKGYRSSS 357
>gi|430813689|emb|CCJ28978.1| unnamed protein product [Pneumocystis jirovecii]
Length = 375
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 180/341 (52%), Gaps = 45/341 (13%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG IATVFG TGFLGRY+V +LAK G+ V++P+R +D RHLK++GDLGQIV M+F+ R
Sbjct: 40 SGHIATVFGATGFLGRYIVNKLAKHGTTVIIPWRD-QDSKRHLKILGDLGQIVMMEFDLR 98
Query: 66 DDNTIKATMAKANVVINLIGREYETR--------------NYSFEDVNHFMAERIAGIAK 111
+ +I+ ++ +N+V NLIGR+YET+ N+S++DV+ + A IA
Sbjct: 99 NKTSIEESVRHSNIVYNLIGRDYETKYNFVINRNPPTNNRNFSYKDVHVYGAAAIAEACV 158
Query: 112 EHGGIMRFIQISCLGASSSSPSRVFST---------------KAAAEEAVLRELPWATIM 156
++ I R I IS L AS +SPS + T K EE V P TI+
Sbjct: 159 KY-NIDRLIHISALNASITSPSHFYKTKVYYKIKEYAKTNNIKGLGEEIVHNIFPEVTIV 217
Query: 157 RPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMG 216
RP+ M G EDR LN F+ + I+P YV DVA A+ + DD T G
Sbjct: 218 RPSIMFGAEDRFLN----FLANAKILLTINNNRELIRPTYVKDVAHALELMMFDDSTK-G 272
Query: 217 KIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPG 276
+IYEL GP +++ E+ ++ I P ++ +P P+ + +L +P P
Sbjct: 273 QIYELYGPHEYSIAEVLTMITHIIHRQPWHLNIPKPIFSIITS----ILNLFWWPTIAPD 328
Query: 277 LFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYL 317
+ IN T + NA T+ DLGI PH L +YL
Sbjct: 329 QIQMQCINYKT-----TSNAKTYTDLGIKPHHLDKLAPKYL 364
>gi|328858126|gb|EGG07240.1| hypothetical protein MELLADRAFT_77647 [Melampsora larici-populina
98AG31]
Length = 391
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 188/325 (57%), Gaps = 24/325 (7%)
Query: 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKF 62
+ +G TVFG TGFLGRY+V +LAK G+QV+VP+R ED RHL++MGDLGQIVP++F
Sbjct: 60 HANAGQTVTVFGATGFLGRYLVHKLAKRGTQVIVPYRD-EDSKRHLRVMGDLGQIVPLEF 118
Query: 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHG---GIMRF 119
+ + I + +NVV NLIGRE+ET+NY F+DV F+ + AGI E G+ RF
Sbjct: 119 DLSNQTLIDDCLRHSNVVYNLIGREHETKNYKFDDV--FV--KGAGILAERAKSLGVDRF 174
Query: 120 IQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKF 179
I +S L AS S S+ + TKA E+ V P ATI++P+ M G EDR LNK K F
Sbjct: 175 IHLSHLNASHDSISKFYRTKALGEQLVKATFPGATIVKPSTMFGPEDRFLNKMV--TKPF 232
Query: 180 NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD- 238
F TR++PV+V+DVA A+ + T +G+ +EL GP +T EL ++
Sbjct: 233 TF--KVNGLETRVRPVHVIDVAEALEMMSRAPST-IGQTFELTGPRTYTYEELFGVLEAL 289
Query: 239 TIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSD--TIVSDNA 296
T++ + P+ + K +A +I+ + V +P + DEI T D +S +A
Sbjct: 290 TLKPLTPSIGFPYWLFKLLA---KIVDRAVWWP-----TLSEDEIVRRTIDDRESLSPDA 341
Query: 297 LTFQDLGIVPHKLKGYPTEYLIWYR 321
L F+ GI P ++ YL +YR
Sbjct: 342 LGFEHFGIQPDLIEHAAITYLRYYR 366
>gi|426195954|gb|EKV45883.1| NdufA9 NADH ubiquinone oxidoreductase subunit [Agaricus bisporus
var. bisporus H97]
Length = 367
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 183/318 (57%), Gaps = 22/318 (6%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG TVFG TGFLGRY+V +L K+G+QV+VP+R EDD R K MGDLGQIV M+++ R
Sbjct: 46 SGHTVTVFGATGFLGRYLVSKLGKLGTQVIVPYRD-EDDARIFKPMGDLGQIVRMEWDIR 104
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ I + +++V NL+GR+YET+N+ F DV+ AERIA + G+ RF+Q+S L
Sbjct: 105 NEQQIAECVRHSDIVFNLVGRDYETKNFKFGDVHVEGAERIAKVCAAE-GVPRFVQVSHL 163
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS++S S+ + TKA EE V P AT+MRP M G EDRLLN A ++ +
Sbjct: 164 NASATSQSKFYQTKAEGEERVKAAFPTATVMRPGPMYGYEDRLLNNMA----FWSIWWKL 219
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYP 244
TRI+PV+V DVA A+ + ++ + G+ L GP T L +L+ T+R
Sbjct: 220 NQAETRIRPVHVFDVAQALANQVANNVS--GRTLSLPGPSTLTYEYLLDLISSVTLRPPS 277
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDE-INAYTSDTIVSDNALTFQDLG 303
+P P+A A A L + V +P P DE I Y D SD ++ +G
Sbjct: 278 RAPMLPKPIALAAAK----LAQSVWWPALSP-----DEVIRRYIDD---SDVPGDWEVVG 325
Query: 304 IVPHKLKGYPTEYLIWYR 321
+ P +++ + +YL YR
Sbjct: 326 VNPTEIESHAIKYLRRYR 343
>gi|238487382|ref|XP_002374929.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Aspergillus flavus NRRL3357]
gi|317143619|ref|XP_001819584.2| NADH-ubiquinone oxidoreductase subunit [Aspergillus oryzae RIB40]
gi|220699808|gb|EED56147.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Aspergillus flavus NRRL3357]
Length = 381
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 178/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++ ++++ R+
Sbjct: 54 GHTATVFGATGFLGRYIVNRLASQGCTVVVPYRE-EMTKRHLKVTGDLGRVNFLEYDLRN 112
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NL+GR+Y T+N+S+ DV+ ERI ++ + R+I +S
Sbjct: 113 TQSIEESVRHSDIVYNLVGRQYPTKNFSYTDVHVDGTERIVEAVAKY-DVDRYIHVSSYN 171
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
AS SPS F+TKA EE P TI+RPA M G ED LL+K A+ +
Sbjct: 172 ASRDSPSEFFATKAWGEEVARSIYPETTIVRPAPMFGFEDNLLHKLAKVTNLLTSNHM-- 229
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ DV A+ L DD T+ G+ +EL GP ++ E+AEL+ I ++ +
Sbjct: 230 --QERYWPVHAPDVGNALERMLHDDSTA-GQTFELYGPKEYSTAEIAELVDREIVKHRRH 286
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP P+ K VA L K + +P+ P DE+ D ++ NA TF+DLGI P
Sbjct: 287 INVPKPILKPVA---HYLNKLLWWPIISP-----DEVEREFIDQVIDPNAKTFKDLGIEP 338
Query: 307 HKLKGYPTEYLIWYRKGG 324
L YL+ YR
Sbjct: 339 VDLATLTFHYLLGYRSAS 356
>gi|426225688|ref|XP_004006995.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Ovis aries]
Length = 380
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 149/233 (63%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRY+V L +MGSQV+VP+R D HL+ MGDLGQI+ M +N R
Sbjct: 52 SGIVATVFGATGFLGRYLVNHLGRMGSQVIVPYRCEPYDTMHLRPMGDLGQIIFMDWNGR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINL+GRE+ET+N+ FEDV + + IA ++KE G+ +FI IS L
Sbjct: 112 DKDSIRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHISHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S S+ KA E+ V P ATI++PA + G EDR LN +A ++ F PL
Sbjct: 171 NADIKSSSKYLRNKAVGEKEVRETFPEATIIKPADIFGREDRFLNYFAN-IRWFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVY+VDV + A+KD + GK + GP+ + + +L + ++
Sbjct: 230 SLGKKTVKQPVYIVDVTKGIINAIKDP-DARGKTFAFVGPNRYLLFDLVQYVF 281
>gi|159046130|ref|YP_001534924.1| ubiquinone dependent NADH dehydrogenase [Dinoroseobacter shibae DFL
12]
gi|157913890|gb|ABV95323.1| ubiquinone dependent NADH dehydrogenase [Dinoroseobacter shibae DFL
12]
Length = 327
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 181/317 (57%), Gaps = 8/317 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRY+ +++A+ G +V V R ++ ++ G +GQ+ P+ N RDD
Sbjct: 4 LVTIFGGSGFVGRYIARRMAQEGWRVRVAVR-RPNEALFVRTYGAVGQVEPILSNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A + A+VVIN +G ET +F V A R+A ++ E G+ RF+QIS +GA
Sbjct: 63 SVQAAVTGADVVINCVGILSETGKNTFGLVQSHGAARVARLSAE-AGVGRFVQISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ S TKA E+AVL+ +P A I+RP+ + G ED+ N++A + P+ G
Sbjct: 122 PAAKSDYARTKAEGEQAVLQAMPEAVILRPSIVFGPEDQFFNRFASMSRLGPILPVVG-A 180
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T+ QPVYV DVA AAV AAL G + IYELGGPD+ + EL M I V
Sbjct: 181 ETKFQPVYVDDVARAAVKAAL---GQAKPGIYELGGPDVNSFRELMAHMLSVIDRRRLIV 237
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
VPFPVA + M + L++K+ + G+ D++ D +V+ +A+ F DLGI P
Sbjct: 238 NVPFPVAHVMGMTLD-LVQKLSLGIIHNGMLTHDQVRNLAKDNVVAADAMGFDDLGIEPV 296
Query: 308 KLKGYPTEYLIWYRKGG 324
L+ EYL +R G
Sbjct: 297 ALEAVLPEYLWRFRPAG 313
>gi|407918818|gb|EKG12081.1| NmrA-like protein [Macrophomina phaseolina MS6]
Length = 386
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 182/320 (56%), Gaps = 21/320 (6%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V+VPFR E RHLK+ GDLG++V ++++ R+
Sbjct: 59 GHTATVFGATGFLGRYIVNRLARQGVTVVVPFRE-EMAKRHLKVAGDLGRVVFIEYDLRN 117
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NL+GR+Y T+N+ EDV+ AERIA ++ + RF+ +S
Sbjct: 118 TQSIEESVRHSDIVYNLVGRDYPTKNFDLEDVHVEGAERIAEAVAKY-DVDRFVHVSSYN 176
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWA---QFVKKFNFFP 183
A+ +SPS F TKA EE V P TI+RPA M G EDRLLN+ A F+ N
Sbjct: 177 ANKNSPSEFFRTKARGEEVVRSIYPETTIVRPAPMFGAEDRLLNRLAGPTNFITSNNM-- 234
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
R PV+ +DV A+ L +D T+ + YEL GP ++ ELAE++ I ++
Sbjct: 235 -----EERYWPVHAIDVGMALEYMLHNDSTA-SETYELYGPTNYSTAELAEMVSKEILKH 288
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
++ VP V + + EIL K + +P+ + D++ + + A TF+DL
Sbjct: 289 RRHINVPKKVLQPIV---EILNKALWWPIS-----SRDQVEREFINQEIDPTAKTFKDLD 340
Query: 304 IVPHKLKGYPTEYLIWYRKG 323
I P ++K YL YR
Sbjct: 341 IEPVEIKSLLYHYLKSYRSS 360
>gi|409079047|gb|EKM79409.1| 39kDa subunit of NdufA9, NADH ubiquinone oxidoreductase [Agaricus
bisporus var. burnettii JB137-S8]
Length = 367
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 182/318 (57%), Gaps = 22/318 (6%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG TVFG TGFLGRY+V +L K+G+QV+VP+R EDD R K MGDLGQIV M+++ R
Sbjct: 46 SGHTVTVFGATGFLGRYLVSKLGKLGTQVIVPYRD-EDDSRIFKPMGDLGQIVRMEWDIR 104
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ I + +++V NL+GR+YET+N+ F DV+ AERIA + G+ RF+Q+S L
Sbjct: 105 SEQQIAECVRHSDIVFNLVGRDYETKNFKFGDVHIEGAERIAKVCAAE-GVPRFVQVSHL 163
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS++S S+ + TKA EE V P AT+MRP M G EDRLLN A ++ +
Sbjct: 164 NASATSQSKFYQTKAEGEERVKAAFPTATVMRPGPMYGYEDRLLNNMA----FWSIWWKL 219
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYP 244
TRI+PV+V DVA A+ + ++ + G+ L GP T L +L+ T+R
Sbjct: 220 NQAETRIRPVHVFDVAQALANQVANNVS--GRTLSLPGPSTLTYEYLLDLISSVTLRPPS 277
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDE-INAYTSDTIVSDNALTFQDLG 303
+P P+A A A L + V +P P DE I Y D SD ++ +G
Sbjct: 278 RAPMLPKPIALAAAK----LAQSVWWPALSP-----DEVIRRYIDD---SDVPGDWEVVG 325
Query: 304 IVPHKLKGYPTEYLIWYR 321
+ P +++ + +YL YR
Sbjct: 326 VNPTEIESHAIKYLRRYR 343
>gi|387193143|gb|AFJ68688.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9
[Nannochloropsis gaditana CCMP526]
Length = 373
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 177/339 (52%), Gaps = 27/339 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+GI A++FG TGFLG+Y+ +L K G ++ + RG E D R K+ DLGQ + ++ R
Sbjct: 38 AGITASLFGGTGFLGKYLQFELGKTGFRLYLANRGDEQDVRAYKVAFDLGQWASVPYSLR 97
Query: 66 DDNTIKATMAKANVVINLIGREYETR---------------NYSFEDVNHFMAERIAGIA 110
D+++IK + +++ IN IG+ Y+T+ N+S E+++ ++A +A
Sbjct: 98 DEDSIKRVLEGSDIAINCIGKYYDTKHLVPHRDASGKLSNVNFSLEEIHIEAPAKLAELA 157
Query: 111 KEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLN 170
K G + F+ +S LGA SP R +TK EEA+ P ATI+RP + G EDRLLN
Sbjct: 158 KSVG-VSHFLHVSALGADKDSPVRWLATKGQGEEALKSVFPRATIVRPGRLFGPEDRLLN 216
Query: 171 KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVH 230
+AQ F PLF G+ +QP Y DV A+ ++D GK +EL G FT
Sbjct: 217 WFAQNAASFGVIPLFNGGNALLQPTYASDVVDAMVKIIEDPEDYEGKTFELAGEHNFTWR 276
Query: 231 ELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDT 290
EL + +D + P V +P V + A L ++P P L D+ ++D
Sbjct: 277 ELMDFTFDITYQKPRVVDLPLAVGEMAAFG----LSQLPNP-----LLTTDDAKLMSTDV 327
Query: 291 IV--SDNALTFQDLGIVPHKLKGYPTEYLIWYRKGGPKF 327
I+ S +A+TFQDL I P L+ YL YR G F
Sbjct: 328 ILEPSSSAMTFQDLHIKPTPLEKVAFNYLYRYRTDGGHF 366
>gi|348684267|gb|EGZ24082.1| hypothetical protein PHYSODRAFT_284843 [Phytophthora sojae]
Length = 344
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 180/326 (55%), Gaps = 19/326 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+GI A VFG+TGFLGRYV L G+ ++P+RG E + HL++ DLG + F+PR
Sbjct: 22 NGITAAVFGSTGFLGRYVCAHLGTNGNAYVLPYRGDESEVSHLRVSADLGNVAQQPFHPR 81
Query: 66 DDNTIKATMAKANVVINLIGREYETR-------NYSFEDVNHFMAERIAGIAKEHGGIMR 118
D ++I + A++V+NLIG+ Y+T+ NY+++DV+ +A IA +AKE G+ R
Sbjct: 82 DRDSIFEAVEGADIVVNLIGKHYQTKHILPWWINYTYDDVHVDVARTIAEVAKE-AGVPR 140
Query: 119 FIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKK 178
+ +S L A +SPS ++K E AV + P A I+RP+ M G EDRLL W
Sbjct: 141 MVHVSSLLAQPNSPSEWAASKFRGEVAVRKAFPEANIVRPSNMFGPEDRLL-VWIGNRLN 199
Query: 179 FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD 238
+ P+ +G IQPV+V DVA A+ + D T GK +EL G + FT ELA+ ++D
Sbjct: 200 YGGVPVVNNGDAVIQPVFVNDVAKAIY-HITQDPTIQGKTFELVGDEEFTYKELADYVFD 258
Query: 239 TIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
+ P V +P PVA+A+ E FP P+ F D + + + + +
Sbjct: 259 ITKRNPSLVNLPLPVAQAIGYFCE------QFPDPK---FTRDWATRLSLNEVKTSDLPG 309
Query: 299 FQDLGIVPHKLKGYPTEYLIWYRKGG 324
++L + P KL+ +L+ + GG
Sbjct: 310 LRELDVEPTKLEKEAPNFLLKFNPGG 335
>gi|121700136|ref|XP_001268333.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Aspergillus clavatus NRRL 1]
gi|119396475|gb|EAW06907.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Aspergillus clavatus NRRL 1]
Length = 382
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 177/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK GDLG++V ++++ R+
Sbjct: 55 GFTATVFGATGFLGRYIVNKLANQGCTVVVPYRE-EMTKRHLKPTGDLGRVVFIEYDLRN 113
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+ DV+ ERIA ++ + RFI +S
Sbjct: 114 TQSIEESVRHSDVVYNLVGRQYPTKNFSYTDVHVDGTERIADAVAKY-DVDRFIHVSSYN 172
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ SPS FSTK EE V P TI+RPA M G ED LL+K A +
Sbjct: 173 AAKDSPSEFFSTKGWGEEVVRSIYPETTIVRPAPMFGFEDNLLHKLASATNLLTANHM-- 230
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L+DD T+ G+ +EL GP ++V E+AEL+ I + +
Sbjct: 231 --QERFWPVHAIDVGTALERMLQDD-TTAGETFELYGPKNYSVAEIAELVDREIVKNRRH 287
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP KA+ P L K+ L P + + DE+ D + A TF+DLGI P
Sbjct: 288 INVP----KAILKPAAYYLNKL---LWWPTI-SADEVEREFIDQKIDKTAKTFKDLGIEP 339
Query: 307 HKLKGYPTEYLIWYRKGG 324
+L YL YR
Sbjct: 340 AELSDLTFHYLKGYRSAS 357
>gi|218191757|gb|EEC74184.1| hypothetical protein OsI_09314 [Oryza sativa Indica Group]
Length = 366
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 115/153 (75%), Gaps = 18/153 (11%)
Query: 109 IAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRL 168
I+KEHGG MRFIQ+SCLGAS+SS SR+ KAA EE+VL+E P ATIMRPA MIGTED +
Sbjct: 231 ISKEHGGFMRFIQVSCLGASASS-SRMLRAKAAGEESVLKEFPEATIMRPATMIGTEDWI 289
Query: 169 LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFT 228
LN+W Q IQPVYVVDVAAA+ +LKDDGTSMGK Y LGGP+I+T
Sbjct: 290 LNRWVQ-----------------IQPVYVVDVAAAIVNSLKDDGTSMGKSYGLGGPEIYT 332
Query: 229 VHELAELMYDTIREYPHYVKVPFPVAKAVAMPR 261
VH+LAELMY+TI E+P Y+ VP P+A+A+A P
Sbjct: 333 VHDLAELMYETICEWPRYIDVPLPIARAIASPE 365
>gi|91080689|ref|XP_975235.1| PREDICTED: similar to NADH-ubiquinone oxidoreductase 39 kda subunit
[Tribolium castaneum]
gi|270006426|gb|EFA02874.1| hypothetical protein TcasGA2_TC007967 [Tribolium castaneum]
Length = 398
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 184/330 (55%), Gaps = 29/330 (8%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG GF+GRYV +L K GSQ+++P+RG D LK+ GDLGQ+ F+
Sbjct: 51 FNGIVATVFGCGGFIGRYVCNRLGKNGSQLILPYRGDPYDVMRLKVCGDLGQVYFHPFDL 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD+ +I+ +NVVINLIGR++ETRN+SF+DV+ A +A +AK G+ RFI +S
Sbjct: 111 RDEESIEKVCRYSNVVINLIGRDWETRNFSFDDVHVKGARLLAKVAK-RSGVERFIHLSA 169
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L A + S+ ++K E+AVL E P ATI RPA + G EDR L + +
Sbjct: 170 LNAEETPEAVILKGGSKFLASKWRGEQAVLEEFPEATIFRPADVYGQEDRFLRYYGHIWR 229
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++ + PL+ G I QPV+V D+A+ + AALKD T+ GK+Y+ GP + + EL +
Sbjct: 230 RQATYLPLWKKGEETIKQPVFVSDLASGIMAALKDSDTA-GKVYQAVGPKRYYLSELVDW 288
Query: 236 MYDTIRE-----YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDT 290
+ +R+ Y Y P+ + E L +V FP+ G + + +
Sbjct: 289 FFRVMRKDKDWGYWRYDMRYDPIFQIRVTLTEKL--RVGFPI---GNLHWERVEREHVTD 343
Query: 291 IVSDNALTFQDLGI--------VPHKLKGY 312
+V T +DLG+ VP +LK Y
Sbjct: 344 VVHSEVPTLEDLGVALTHMEDQVPWELKPY 373
>gi|70992617|ref|XP_751157.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Aspergillus
fumigatus Af293]
gi|66848790|gb|EAL89119.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Aspergillus fumigatus Af293]
gi|159124728|gb|EDP49846.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Aspergillus fumigatus A1163]
Length = 382
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 176/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VPFR E RHLK GDLG++V ++++ R+
Sbjct: 55 GHTATVFGATGFLGRYIVNKLANQGCTVVVPFRE-EMTKRHLKPTGDLGRVVFIEYDLRN 113
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+ DV+ ERIA ++ + RFI +S
Sbjct: 114 TQSIEESVRHSDVVYNLVGRQYPTKNFSYTDVHVDGTERIAEAVAKY-DVDRFIHVSSYN 172
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +SPS F TKA EE P TI+RPA M G ED LL+K A F +
Sbjct: 173 ADKNSPSEFFRTKAWGEEVARSIFPETTIVRPAPMFGFEDNLLHKLAGVTNLFTSNHM-- 230
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+V+DV +A+ L DD T+ G+ +EL GP ++ E+A+L+ I ++ +
Sbjct: 231 --QERFWPVHVIDVGSALELMLHDD-TTAGQTFELYGPKNYSTAEIAQLVDREIVKHRRH 287
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP KAV P L K+ + + DE+ D + A TF+DLG+ P
Sbjct: 288 INVP----KAVLKPMAYYLNKLLW----WHTISADEVEREFIDQKIDKTAKTFKDLGMEP 339
Query: 307 HKLKGYPTEYLIWYRKGG 324
+L YL YR
Sbjct: 340 AELSDLTFHYLKGYRSSS 357
>gi|254470804|ref|ZP_05084207.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
[Pseudovibrio sp. JE062]
gi|211959946|gb|EEA95143.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
[Pseudovibrio sp. JE062]
Length = 328
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 177/328 (53%), Gaps = 16/328 (4%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
M +G + TVFG +GF+GR+V++ LA+ G + R E HL+ +G +GQI+P+
Sbjct: 3 MAQALNGKLITVFGGSGFIGRHVIRILAERGYSIRAAVRRPEL-AEHLQPLGAVGQIMPV 61
Query: 61 KFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+ R+ +++ + A VINL+G YET F+ V +A + KE G I F+
Sbjct: 62 AASVRNKKSVERAVEGACAVINLVGILYETGAQKFDSVQAKGPGVVAEVCKEQG-IDTFV 120
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
+S +GA +SP+ TKAA E+AVL +P A I RP+ + G ED N++ + F
Sbjct: 121 HVSAIGADENSPAVYAKTKAAGEKAVLEAMPNAVIFRPSIVFGPEDDFFNRFGSMAQLFP 180
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
PL G G T+ QPVYV DVA A+ A ++ GKIYELGGP + T E +LM + I
Sbjct: 181 ALPLIGGGHTKFQPVYVGDVALAIANA-AENKVETGKIYELGGPQVATFKECLQLMMNVI 239
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL--- 297
V +PF +A+ A ++ LP+P + +D++N SD +VS A
Sbjct: 240 LRKRMLVSLPFLMARIQAKFLQM--------LPKP-MLTVDQVNLLKSDNVVSKEAQAEK 290
Query: 298 -TFQDLGIVPHKLKGYPTEYLIWYRKGG 324
TF+ LGI PH ++ YL +R G
Sbjct: 291 RTFEGLGIEPHSMEAILPTYLDKFRPRG 318
>gi|95768472|gb|ABF57357.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Bos
taurus]
Length = 369
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 148/233 (63%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV+VP R D HL+ MGDLGQI+ M +N R
Sbjct: 41 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDLGQIIFMDWNGR 100
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + ++VVINL+GRE+ET+N+ FEDV + + IA ++KE G+ +FI IS L
Sbjct: 101 DKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHISHL 159
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S S+ +KA E+ V P ATI++PA + G EDR LN +A ++ F PL
Sbjct: 160 NADIKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRFLNYFAN-IRWFGGVPLI 218
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVY+VDV + A+KD + GK + GP + + +L + ++
Sbjct: 219 SLGKKTVKQPVYIVDVTKGIINAIKDP-DARGKTFAFVGPSRYLLFDLVQYVF 270
>gi|374329046|ref|YP_005079230.1| NADH dehydrogenase (ubiquinone) [Pseudovibrio sp. FO-BEG1]
gi|359341834|gb|AEV35208.1| NADH dehydrogenase (ubiquinone) [Pseudovibrio sp. FO-BEG1]
Length = 328
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 178/328 (54%), Gaps = 16/328 (4%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
M +G + TVFG +GF+GR+V++ LA+ G + R E HL+ +G +GQI+P+
Sbjct: 3 MAQALNGKLITVFGGSGFIGRHVIRILAERGYSIRAAVRRPEL-AEHLQPLGAVGQIMPV 61
Query: 61 KFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+ R+ +++ + A VINL+G YET F+ V +A + KE G I F+
Sbjct: 62 AASVRNKKSVERAVEGACAVINLVGILYETGTQKFDSVQAKGPGVVAEVCKEKG-IDTFV 120
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
+S +GA ++SP+ TKAA E+AVL +P A I RP+ + G ED N++ + F
Sbjct: 121 HVSAIGADANSPAVYAKTKAAGEKAVLDAMPNAVIFRPSIVFGPEDDFFNRFGSMAQLFP 180
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
PL G G T+ QPVYV DVA A+ A ++ GKIYELGGP + T E +LM + I
Sbjct: 181 ALPLIGGGHTKFQPVYVGDVALAIANA-AENKVETGKIYELGGPQVATFKECLQLMMNVI 239
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL--- 297
V +PF +A+ A ++ LP+P + +D++N SD +VS A
Sbjct: 240 LRRRMLVSLPFLMARIQAKFLQM--------LPKP-MLTVDQVNLLKSDNVVSKEAQAEK 290
Query: 298 -TFQDLGIVPHKLKGYPTEYLIWYRKGG 324
TF+ LGI PH ++ YL +R G
Sbjct: 291 RTFEGLGIEPHSMEAILPTYLDKFRPRG 318
>gi|45430053|ref|NP_991386.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial precursor [Bos taurus]
gi|464255|sp|P34943.1|NDUA9_BOVIN RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
gi|228|emb|CAA42053.1| NADH dehydrogenase (ubiquinone) 42 kDa subunit [Bos taurus]
gi|74268236|gb|AAI02360.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Bos
taurus]
gi|296487076|tpg|DAA29189.1| TPA: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial precursor [Bos taurus]
Length = 380
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 148/233 (63%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV+VP R D HL+ MGDLGQI+ M +N R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDLGQIIFMDWNGR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + ++VVINL+GRE+ET+N+ FEDV + + IA ++KE G+ +FI IS L
Sbjct: 112 DKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHISHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S S+ +KA E+ V P ATI++PA + G EDR LN +A ++ F PL
Sbjct: 171 NADIKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRFLNYFAN-IRWFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVY+VDV + A+KD + GK + GP + + +L + ++
Sbjct: 230 SLGKKTVKQPVYIVDVTKGIINAIKDP-DARGKTFAFVGPSRYLLFDLVQYVF 281
>gi|425772177|gb|EKV10590.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Penicillium digitatum PHI26]
gi|425775826|gb|EKV14075.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Penicillium digitatum Pd1]
Length = 382
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 179/318 (56%), Gaps = 30/318 (9%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V++PFR E RHLK+ GDLG++V M+++ R+
Sbjct: 54 GHTATVFGATGFLGRYIVNKLARQGCTVVIPFRE-EMTKRHLKVTGDLGRVVFMEYDLRN 112
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+EDV+ ERIA ++ + RFI +S
Sbjct: 113 TQSIEESVRHSDVVYNLVGRQYPTKNFSYEDVHVDGTERIAEAVAKY-DVDRFIHVSSYN 171
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A SPS F+TKA EE V + P TI+RPA M G ED LL+K A+ F +
Sbjct: 172 ARRDSPSEYFATKAWGEEIVRKIYPETTIVRPAPMFGFEDNLLHKLAKIGNVFTSNHM-- 229
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DVA A+ L DD T+ G+ YEL GP ++ E+AEL+ I + +
Sbjct: 230 --QERYWPVHAIDVATALERMLHDDSTA-GQTYELYGPKNYSTAEIAELVDREIIKKRRH 286
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRP---GLFNLDEINAYTSDTIVSDNALTFQDLG 303
+ VP ++LLK + + + + DE+ D ++ A TF+DLG
Sbjct: 287 INVP-----------KVLLKPFAYYINKLLWWHTLSADEVEREFLDQVIDPTAKTFKDLG 335
Query: 304 IVP---------HKLKGY 312
+ H L+GY
Sbjct: 336 MEETADLANLTFHYLQGY 353
>gi|301105479|ref|XP_002901823.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit,
putative [Phytophthora infestans T30-4]
gi|262099161|gb|EEY57213.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit,
putative [Phytophthora infestans T30-4]
Length = 344
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 180/326 (55%), Gaps = 19/326 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+GIIATVFG TG LGRYV L G+ +VP+RG + + HL++ DLG + F+PR
Sbjct: 22 NGIIATVFGATGSLGRYVCAHLGTNGNGYVVPYRGDDAEVSHLRVSADLGNVAQQPFHPR 81
Query: 66 DDNTIKATMAKANVVINLIGREYETR-------NYSFEDVNHFMAERIAGIAKEHGGIMR 118
D ++I + +++VINLIG+ Y+T+ NYS++DV+ +A IA +AKE G+ R
Sbjct: 82 DRDSILEAVEGSDIVINLIGKHYQTKHILPWWINYSYDDVHVDVARTIAEVAKE-AGVPR 140
Query: 119 FIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKK 178
+ +S L A +SPS ++K E AV + P A I+RP+ M G EDRLL W
Sbjct: 141 MVHVSSLLAQPNSPSEWAASKFRGEVAVRKAFPEANIVRPSNMFGPEDRLL-VWMGNRLN 199
Query: 179 FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD 238
+ P+ +G IQPV+V DVA A+ +D+ T GK +E G + FT ELA+ ++D
Sbjct: 200 YGGVPVVDNGDAVIQPVFVNDVAKAIYHITQDE-TIQGKTFEFVGDEEFTYKELADYVFD 258
Query: 239 TIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
++ V +P PVA+A+ E FP P+ F D + + + + +
Sbjct: 259 ITKQNSRLVNLPLPVAQAIGSFCE------KFPDPK---FTRDWATRLSLNEVKTSDLPG 309
Query: 299 FQDLGIVPHKLKGYPTEYLIWYRKGG 324
++L + P KL+ +LI + GG
Sbjct: 310 LRELDVEPTKLEKEAPNFLIKFNAGG 335
>gi|317030711|ref|XP_001393173.2| NADH-ubiquinone oxidoreductase subunit [Aspergillus niger CBS
513.88]
gi|350630138|gb|EHA18511.1| hypothetical protein ASPNIDRAFT_207707 [Aspergillus niger ATCC
1015]
Length = 382
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 177/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++ ++++ R+
Sbjct: 55 GHTATVFGATGFLGRYIVNKLATQGCTVVVPYRE-EMTKRHLKVTGDLGRVNFIEYDLRN 113
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ + ++VV NL+GR+Y T+N+S+ DV+ ERI ++ + RFI +S
Sbjct: 114 TQSIEEAVRHSDVVYNLVGRQYPTKNFSYTDVHVDGTERIVEAVAKY-DVDRFIHVSSYN 172
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
AS SPS F+TKA EE V P TI+RPA M G ED LL+K A+ +
Sbjct: 173 ASRDSPSEYFATKAWGEEIVRNIYPETTIVRPAPMFGFEDNLLHKLARVTNLLTSNHM-- 230
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L DD T +G+ +EL GP ++ E+AEL+ I ++ +
Sbjct: 231 --QERYWPVHAIDVGTALERMLHDDST-VGQTFELYGPKNYSTAEIAELVDREIVKHRRH 287
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
V VP + K +A L K + +P + DE+ D ++ NA TF+DL I P
Sbjct: 288 VNVPKAILKPLA---HYLNKFLWWP-----TISADEVEREFIDQVIDPNAKTFKDLDIEP 339
Query: 307 HKLKGYPTEYLIWYRKGG 324
+L YL+ YR
Sbjct: 340 VELSTLTFHYLLGYRSAS 357
>gi|170090179|ref|XP_001876312.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649572|gb|EDR13814.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 314
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 182/320 (56%), Gaps = 22/320 (6%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G TVFG TGFLGRY+V +L KMG+QV+VP+R ED+ R LK MGDLGQIV M+++ R
Sbjct: 15 AGRTVTVFGCTGFLGRYLVSKLGKMGTQVVVPYRD-EDEARLLKPMGDLGQIVRMEWDLR 73
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+ TI + ++ V NL+GR++ET+N+ ++ V F AERIA IA E G+ RFIQ+S L
Sbjct: 74 DEKTIAECLRHSDTVFNLVGRDFETKNFDYKSVQVFGAERIAKIAAE-SGVSRFIQLSHL 132
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS +SPS+ ++ KA E+ V P ATI+RPA M G ED+LL A + +N
Sbjct: 133 NASENSPSKFYAAKAEGEQLVKAAFPTATIVRPATMFGYEDKLLTNMAVWPIWWN----L 188
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G TR++PV+V++VA A+ + + + L GP T L +L+ +
Sbjct: 189 NHGQTRVRPVHVMEVAQALANLIS--LPQLPRTVNLPGPSTLTHEYLLDLVSSVTLQ--- 243
Query: 246 YVKVPFPVAKAVAMPREI--LLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
P +KA +P+ + L ++ + P L + I + D+ V + + +G
Sbjct: 244 ------PPSKAPVLPKGVASALARIGQAVWWPALSPDEVIRRFIDDSDVPGD---WDLVG 294
Query: 304 IVPHKLKGYPTEYLIWYRKG 323
I P +++ + YL YR
Sbjct: 295 IQPSEIEAHAIAYLRRYRSA 314
>gi|61806490|ref|NP_001013477.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 [Danio rerio]
gi|60552256|gb|AAH91545.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 [Danio rerio]
gi|182891204|gb|AAI64086.1| Ndufa9 protein [Danio rerio]
Length = 309
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 144/221 (65%), Gaps = 3/221 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG+ ATVFG TGFLGRYVV +L +MGSQV++P+R + D +L+ MGDLGQI+ M+++PR
Sbjct: 54 SGLAATVFGATGFLGRYVVNRLGRMGSQVVIPYRCDQYDLMYLRPMGDLGQIIFMEWDPR 113
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I+ ++ +NVVINL+GRE+ET NY +EDV + +IA +E GI +FI +S L
Sbjct: 114 NKESIQRAISHSNVVINLVGREWETSNYKYEDVFVSIPLQIARATRE-AGIKKFIHMSHL 172
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPS+ KA EEAV E P A IM+P+ + G EDR LN +A PL
Sbjct: 173 NADIRSPSKYLRNKAVGEEAVRNEFPDAIIMKPSELFGREDRFLNHFANMRWFGTAVPLI 232
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225
G + QPV+VVDVA A+ A++D + GK Y L GP+
Sbjct: 233 AMGKKTVKQPVHVVDVAKAIINAIQDPEAN-GKTYALVGPN 272
>gi|134077702|emb|CAK45742.1| unnamed protein product [Aspergillus niger]
Length = 372
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 177/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++ ++++ R+
Sbjct: 45 GHTATVFGATGFLGRYIVNKLATQGCTVVVPYRE-EMTKRHLKVTGDLGRVNFIEYDLRN 103
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ + ++VV NL+GR+Y T+N+S+ DV+ ERI ++ + RFI +S
Sbjct: 104 TQSIEEAVRHSDVVYNLVGRQYPTKNFSYTDVHVDGTERIVEAVAKY-DVDRFIHVSSYN 162
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
AS SPS F+TKA EE V P TI+RPA M G ED LL+K A+ +
Sbjct: 163 ASRDSPSEYFATKAWGEEIVRNIYPETTIVRPAPMFGFEDNLLHKLARVTNLLTSNHM-- 220
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L DD T +G+ +EL GP ++ E+AEL+ I ++ +
Sbjct: 221 --QERYWPVHAIDVGTALERMLHDDST-VGQTFELYGPKNYSTAEIAELVDREIVKHRRH 277
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
V VP + K +A L K + +P + DE+ D ++ NA TF+DL I P
Sbjct: 278 VNVPKAILKPLA---HYLNKFLWWP-----TISADEVEREFIDQVIDPNAKTFKDLDIEP 329
Query: 307 HKLKGYPTEYLIWYRKGG 324
+L YL+ YR
Sbjct: 330 VELSTLTFHYLLGYRSAS 347
>gi|281353113|gb|EFB28697.1| hypothetical protein PANDA_009221 [Ailuropoda melanoleuca]
Length = 360
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV+VP+R D HL+ MGDLGQI+ ++++ R
Sbjct: 35 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCDPYDTMHLRPMGDLGQIIFLEWDGR 94
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ ++I+ + +NVVINL+GRE+ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 95 NKDSIRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHVSHL 153
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA E+ V P A I++P+ + G EDR LN +A + F PL
Sbjct: 154 NADIKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRFLNHFAN-TRWFGGVPLI 212
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVYVVDV+ + +A+KD S GK + GP+ + + +L + ++
Sbjct: 213 SLGKKTVKQPVYVVDVSKGIVSAVKDP-DSRGKSFAFVGPNRYLLFDLVQYVF 264
>gi|410963573|ref|XP_003988339.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Felis catus]
Length = 377
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV +L +MGSQV++P+R D HL+ MGDLGQI+ +++N +
Sbjct: 52 SGVVATVFGATGFLGRYVVNRLGRMGSQVIIPYRCEAYDTMHLRPMGDLGQIIFLEWNGK 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINL+GRE+ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRAVKHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA E+ V P A I++P+ + G EDR LN +A ++ F PL
Sbjct: 171 NADIKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRFLNHFAN-IRWFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVYVVDV+ + A+KD + GK + GP + + +L + ++
Sbjct: 230 SLGKKTVKQPVYVVDVSKGIVNAIKDP-DARGKSFAFVGPSRYLLFDLVQYVF 281
>gi|358371340|dbj|GAA87948.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Aspergillus kawachii
IFO 4308]
Length = 382
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 176/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++ ++++ R+
Sbjct: 55 GHTATVFGATGFLGRYIVNKLATQGCTVVVPYRE-EMTKRHLKVTGDLGRVNFIEYDLRN 113
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ + ++VV NL+GR+Y T+N+S+ DV+ ERI ++ + RFI +S
Sbjct: 114 TQSIEEAVRHSDVVYNLVGRQYPTKNFSYTDVHVDGTERIVEAVAKY-DVDRFIHVSSYN 172
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
AS SPS F+TKA EE V P TI+RPA M G ED LL+K A+ +
Sbjct: 173 ASRDSPSEYFATKAWGEEIVRNIYPETTIVRPAPMFGFEDNLLHKLARVTNLLTSNHM-- 230
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L DD T +G+ +EL GP ++ E+AEL+ I ++ +
Sbjct: 231 --QERYWPVHAIDVGTALERMLHDDST-VGQTFELYGPKNYSTAEIAELVDREIVKHRRH 287
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
V VP + K +A L K + +P + DE+ D ++ NA TF+DL I P
Sbjct: 288 VNVPKAILKPLAY---YLNKYLWWP-----TISADEVEREFIDQVIDPNAKTFKDLDIEP 339
Query: 307 HKLKGYPTEYLIWYRKGG 324
L YL+ YR
Sbjct: 340 VDLSTLTFHYLLGYRSAS 357
>gi|409042496|gb|EKM51980.1| hypothetical protein PHACADRAFT_199484 [Phanerochaete carnosa
HHB-10118-sp]
Length = 363
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 185/328 (56%), Gaps = 38/328 (11%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G + TVFG TGFLGRY+V +LAK GSQ++VP+R ED+ RHLK MGDLGQIVPM++N R
Sbjct: 44 TGHVVTVFGCTGFLGRYLVAKLAKAGSQIIVPYRD-EDEKRHLKPMGDLGQIVPMEWNLR 102
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ I+ + ++ V NL+GR+YET+N+ F DV+ AERIA IA + G+ RFIQ+S L
Sbjct: 103 RADQIEECLRHSDTVYNLVGRDYETKNFKFRDVHVDGAERIAKIAAQ-AGVPRFIQVSHL 161
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS + S + ++ EE V P ATI+RPAAM G EDR LN A +P++
Sbjct: 162 NASLDTTSTFYKSRFEGEEKVKAAYPGATIVRPAAMYGYEDRFLNNMA-------IWPIW 214
Query: 186 ---GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
T+I+PV+V+DVA A+T L + S+ + L GP T L L+ +
Sbjct: 215 WKLNHMKTKIRPVHVMDVAQALTNIL--EVPSLPGLLNLPGPSTLTYEYLLALVSSVTCQ 272
Query: 243 YPHYVKVPFPVAKAVAMPREILL------KKVPFPLPRPGLFNLDEIN-AYTSDTIVSDN 295
P ++A +P++I L + + +P P DE+ Y SDT V +
Sbjct: 273 ---------PPSRAPTVPKQIALLSARAAQNIWWPALSP-----DEVERRYISDTEVPGD 318
Query: 296 ALTFQDLGIVPHKLKGYPTEYLIWYRKG 323
+ +G+ P +++ YL YR
Sbjct: 319 ---WDKVGVEPTEIEDSAILYLRRYRSA 343
>gi|301770137|ref|XP_002920485.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like isoform 2 [Ailuropoda
melanoleuca]
Length = 377
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV+VP+R D HL+ MGDLGQI+ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCDPYDTMHLRPMGDLGQIIFLEWDGR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ ++I+ + +NVVINL+GRE+ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 NKDSIRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA E+ V P A I++P+ + G EDR LN +A + F PL
Sbjct: 171 NADIKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRFLNHFAN-TRWFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVYVVDV+ + +A+KD S GK + GP+ + + +L + ++
Sbjct: 230 SLGKKTVKQPVYVVDVSKGIVSAVKDP-DSRGKSFAFVGPNRYLLFDLVQYVF 281
>gi|301770135|ref|XP_002920484.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like isoform 1 [Ailuropoda
melanoleuca]
Length = 401
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV+VP+R D HL+ MGDLGQI+ ++++ R
Sbjct: 76 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCDPYDTMHLRPMGDLGQIIFLEWDGR 135
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ ++I+ + +NVVINL+GRE+ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 136 NKDSIRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHVSHL 194
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA E+ V P A I++P+ + G EDR LN +A + F PL
Sbjct: 195 NADIKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRFLNHFAN-TRWFGGVPLI 253
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVYVVDV+ + +A+KD S GK + GP+ + + +L + ++
Sbjct: 254 SLGKKTVKQPVYVVDVSKGIVSAVKDP-DSRGKSFAFVGPNRYLLFDLVQYVF 305
>gi|115899579|ref|XP_786784.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Strongylocentrotus
purpuratus]
Length = 378
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 175/305 (57%), Gaps = 16/305 (5%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SGI+A VFG GFLG+Y+V +L + GSQV+VP R E + +KLMGDLGQI+ ++N
Sbjct: 53 FSGIVAAVFGGNGFLGKYIVNRLGREGSQVVVPHRCDEYYVQPMKLMGDLGQIMFRQYNL 112
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
R + I+ + VV+NL+ ++YETR+++FED+N +A I KE G+ R I +S
Sbjct: 113 RQHDLIRDIVGNCTVVVNLLSKDYETRHFTFEDINIEAPRNLAKICKE-AGVPRLIHVSA 171
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
LGA +SP++ TKAA E V E P A I+RPA M G EDR N +A + F PL
Sbjct: 172 LGADMASPAKFLRTKAAGERVVREEFPEAVIVRPAQMFGREDRFFNHFAN-QRFFGGVPL 230
Query: 185 FGDGSTRIQ-PVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIRE 242
F ++ PVYV DVA A+ + + ++ + GK YEL GP+ + + +L + +Y T R
Sbjct: 231 FPSARRVVKRPVYVSDVAQAIMSII-NEKEADGKTYELAGPNGYLLTDLVDFIYRVTRRP 289
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPF-PLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
Y Y VP P+ + +A E+ PF P + L +T+D +V +D
Sbjct: 290 YIRY-PVPRPILRLIASGFEL----TPFDPFLTRDMLELQ----HTTD-VVQSGMPGLED 339
Query: 302 LGIVP 306
L + P
Sbjct: 340 LNVTP 344
>gi|89067250|ref|ZP_01154763.1| NADH-ubiquinone oxidoreductase [Oceanicola granulosus HTCC2516]
gi|89046819|gb|EAR52873.1| NADH-ubiquinone oxidoreductase [Oceanicola granulosus HTCC2516]
Length = 334
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 176/316 (55%), Gaps = 7/316 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRY+ ++LAK G ++ V R E+ ++ G++GQ+VP+ N RDD+
Sbjct: 4 LVTIFGGSGFVGRYIARRLAKQGWRIRVAVRRPEE-ALFVRPYGNVGQVVPVFCNVRDDD 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A A+VV+N +G E +F+ V ERIA IA E G + R + +S +GA
Sbjct: 63 SVRAVTRGADVVVNCVGVLTENGRNTFQAVQEEAPERIARIAAEEG-VARMVHVSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SPS TKAA E V P A I+RP+ + G +D N++A+ + P+ G G
Sbjct: 122 PDSPSEYARTKAAGEAGVRARFPGAVILRPSIVFGQDDEFFNRFARMAARSPVLPVVG-G 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPV+V DVA A AAL +G + IYELGGPD+ T L M D I V
Sbjct: 181 NTRFQPVFVDDVAKA--AALAVEGKAAPGIYELGGPDVNTFSVLMREMLDVILRRRLIVN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
VPF +A+ +A + L+ + L P L D++ SD IV+D A F +LGI P
Sbjct: 239 VPFGLARLMASGFTV-LRFLSLGLFTPPL-TRDQVENLRSDNIVADGARGFAELGIQPKS 296
Query: 309 LKGYPTEYLIWYRKGG 324
++ +YL +R G
Sbjct: 297 MEAILPDYLWRFRPTG 312
>gi|403419232|emb|CCM05932.1| predicted protein [Fibroporia radiculosa]
Length = 368
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 185/322 (57%), Gaps = 26/322 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G +ATVFG TGFLGRY+V +LAK G+QV++P+R ED+ RHL++ GDLGQIV M+++ R
Sbjct: 49 TGHVATVFGCTGFLGRYLVAKLAKAGTQVIIPYRE-EDEKRHLRVTGDLGQIVSMEWDLR 107
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+D+ I + +++V NL+GREYET+N++F+ V+ A+RIA IA + G+ RF+ +S L
Sbjct: 108 NDDQIAECVRHSDIVYNLVGREYETKNFNFDAVHATGAQRIANIAAQ-SGVARFVHVSHL 166
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS +SPS + +KA ++ V P ATI+RPA M G EDRLLN A +P++
Sbjct: 167 NASHNSPSEFYRSKARGDDLVQEAFPSATIVRPAIMYGYEDRLLNNMA-------IWPIW 219
Query: 186 ---GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
T+I+PV+V+DVA A+T + S + L GP + L LM
Sbjct: 220 WKLNHMQTKIRPVHVMDVAQALTNLIS--VPSQPGTFNLPGPSTLSFEYLLALMSSVTYT 277
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDE-INAYTSDTIVSDNALTFQD 301
P V V KAVA+ + V +P P DE + Y D V + +
Sbjct: 278 PPSRAPV---VPKAVAIALAKAAQAVWWPALSP-----DEVVRRYLDDADVPGD---WDK 326
Query: 302 LGIVPHKLKGYPTEYLIWYRKG 323
+G+VP +++ + YL YR
Sbjct: 327 VGVVPDEIEQHAITYLRRYRSA 348
>gi|440638429|gb|ELR08348.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
[Geomyces destructans 20631-21]
Length = 381
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 176/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V++P+R E RHLK+ GDLG+++ M+++ R+
Sbjct: 54 GHTATVFGATGFLGRYIVNRLARQGCTVIIPYRE-EMAKRHLKVTGDLGRVIFMEYDLRN 112
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+++ ++ +++V NL+GR Y T+N+ EDV+ AERIA ++ + RF+ +S
Sbjct: 113 TESLEESVRHSDIVYNLVGRSYPTKNFDLEDVHVEGAERIADAVAKY-DVDRFVHVSSYN 171
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A ++S S + TKA E V P TI+RPA M G EDRLL+K A
Sbjct: 172 ADANSTSEFYRTKARGESVVRSIFPETTIVRPAPMFGFEDRLLHKLAGVTNLLT----SN 227
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ R +PV+V+DV A+ L DD T+ + YEL GP ++ E+AEL+ I ++ +
Sbjct: 228 NMEERYKPVHVIDVGHALERMLNDDSTA-SQTYELFGPKDYSTAEIAELVDKEIHKHRRH 286
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P + K A IL K + +P + + DEI + + A TF+DL I P
Sbjct: 287 INLPKSILKPAAT---ILNKALWWP-----VLSGDEIEREFINQHIDPTAKTFKDLDIEP 338
Query: 307 HKLKGYPTEYLIWYRKGG 324
L YL YR
Sbjct: 339 ADLANLTFHYLQSYRSAA 356
>gi|440904291|gb|ELR54825.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial, partial [Bos grunniens mutus]
Length = 363
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 147/233 (63%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV+VP R D HL+ MGDLGQI+ M +N R
Sbjct: 35 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDLGQIIFMDWNGR 94
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + ++VVINL+GRE+ET+N+ FEDV + + IA ++KE G+ + I IS L
Sbjct: 95 DKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKE-AGVEKLIHISHL 153
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S S+ +KA E+ V P ATI++PA + G EDR LN +A ++ F PL
Sbjct: 154 NADIKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRFLNYFAN-IRWFGGVPLI 212
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVY+VDV + A+KD + GK + GP + + +L + ++
Sbjct: 213 SLGKKTVKQPVYIVDVTKGIINAIKDP-DARGKTFAFVGPSRYLLFDLVQYVF 264
>gi|126303361|ref|XP_001379499.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Monodelphis domestica]
Length = 377
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 151/234 (64%), Gaps = 4/234 (1%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SGI+ATVFG TGFLGRYVV L ++GSQV++P+R D +LK MGDLGQ++ +++N
Sbjct: 51 FSGIVATVFGATGFLGRYVVSHLGRIGSQVIIPYRCEPYDITYLKPMGDLGQLIFLEWNA 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+ ++I+ + +NVVINLIGR++ET N+ F DV + + IA +AKE G+ FI +S
Sbjct: 111 KIRSSIQRALEHSNVVINLIGRDWETNNFDFSDVFATIPQSIARLAKE-AGVETFIHVSH 169
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L A S S+ KA E AV E P A I++P+ + G EDRLLN +A ++ F PL
Sbjct: 170 LNADLRSTSKYLRNKAVGEIAVKDEFPEAIILKPSDIFGREDRLLNYFAN-IRWFGGVPL 228
Query: 185 FGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVYVVDV+ A+ A+KD G + GK Y + GP + + +L + ++
Sbjct: 229 ISLGRNTVKQPVYVVDVSKAIINAIKDPG-ARGKTYAITGPHRYLLCDLVQYIF 281
>gi|402080092|gb|EJT75237.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 374
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 178/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG +GRY+V +LA+ G V+VPFR E RHLK+ GDLG++V ++++ R+
Sbjct: 48 GHTATVFGATGQVGRYIVNRLARQGCTVVVPFRE-EMAKRHLKVAGDLGRVVFIEYDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR Y T+N+S EDV+ AERIA ++ + RFI +S
Sbjct: 107 TASIEESVRHSDVVYNLVGRNYPTKNFSLEDVHVEGAERIAEAVAKY-DVDRFIHMSSYN 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ SPS F TKA E+ V P TI+RPA + G EDRLL K A + F
Sbjct: 166 ANLDSPSEFFRTKARGEQVVRSIFPETTIVRPAPIFGFEDRLLLKLASVLNLFT----AN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ R PV+ +DV A+ L DD T+ + YEL GP +++ E+AE++ I + +
Sbjct: 222 NMQERFWPVHSIDVGRALEKMLYDDSTA-SQTYELHGPKNYSMAEIAEMVDREIFKKRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
V VP KA+ P LL +V + + + DEI D + + A TF DLGI P
Sbjct: 281 VNVP----KAILKPVAALLNRVLW----WDVMSADEIEREFIDQEIDETAKTFADLGIEP 332
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ + YL +R
Sbjct: 333 GDISKFTYHYLQGFRSSS 350
>gi|367047327|ref|XP_003654043.1| hypothetical protein THITE_2116621 [Thielavia terrestris NRRL 8126]
gi|347001306|gb|AEO67707.1| hypothetical protein THITE_2116621 [Thielavia terrestris NRRL 8126]
Length = 376
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/314 (38%), Positives = 176/314 (56%), Gaps = 15/314 (4%)
Query: 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
ATVFG TG LGRY+V +LA+ G V+VP+R E RHLKL GDLG++V +F+ R+ +
Sbjct: 52 ATVFGATGQLGRYIVNRLARQGCTVIVPYRE-EMAKRHLKLTGDLGRVVFTEFDLRNTQS 110
Query: 70 IKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
I+ ++ ++VV NLIGR Y T+N+S EDV+ AERIA ++ + RFI +S A+
Sbjct: 111 IEESVRHSDVVYNLIGRNYPTKNFSLEDVHIEGAERIAEAVAKY-DVDRFIHVSSYNANP 169
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
S S F+TK AE V P TI+RPA M G ED+LL K A F +
Sbjct: 170 DSTSEFFATKGYAERVVREIFPETTIVRPAPMFGFEDKLLLKLASVTNLFT----ANNMQ 225
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
R PV+V+DV A+ L DD T+ + +EL GP ++ E+AEL+ I + ++ V
Sbjct: 226 ERYWPVHVIDVGEALEKMLFDDNTA-SQTFELYGPRNYSTAEIAELVDREIYKKRRHINV 284
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
P KA+ P LL +V + + + DE+ D ++ +A TF+DLG+ P +
Sbjct: 285 P----KAILKPTAGLLNRVLW----WDIMSADEVEREFIDQVIDPSAKTFKDLGMEPSDI 336
Query: 310 KGYPTEYLIWYRKG 323
+ YL +R
Sbjct: 337 SKWTYHYLKGFRSS 350
>gi|212534330|ref|XP_002147321.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Talaromyces marneffei ATCC 18224]
gi|210069720|gb|EEA23810.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Talaromyces marneffei ATCC 18224]
Length = 385
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 176/315 (55%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V+VPFR E RHLK+ GDLG++V M+++ R+
Sbjct: 58 GHTATVFGATGFLGRYIVNRLARSGCTVIVPFRE-EMTKRHLKVTGDLGRVVFMEYDLRN 116
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+++EDV+ AERIA ++ I RFI +S
Sbjct: 117 TESIEESVRHSDVVYNLVGRDYPTKNFTYEDVHVDGAERIAEAVAKY-DIDRFIHVSSYN 175
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ SPS F TK E V P TI+RPA M G ED LL+K A +
Sbjct: 176 AAEDSPSEFFKTKGWGERVVRNIFPETTIVRPAPMFGFEDNLLHKLAGVTNLLTSNHM-- 233
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV AA+ L DD T+ + +EL GP ++ ELAE++ I ++ +
Sbjct: 234 --QERFWPVHAIDVGAALERMLYDDNTA-SQTFELYGPKQYSTAELAEIVDKEIVKHRRH 290
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P KAV P L K L P + + D+I D + A TF+DL I P
Sbjct: 291 INLP----KAVLKPAAYYLNKF---LWWPTM-SADQIEREFIDQHIDPTAKTFKDLDIEP 342
Query: 307 HKLKGYPTEYLIWYR 321
+ YL+ YR
Sbjct: 343 ADITSLTYLYLMGYR 357
>gi|389637518|ref|XP_003716394.1| hypothetical protein MGG_03525 [Magnaporthe oryzae 70-15]
gi|351642213|gb|EHA50075.1| hypothetical protein MGG_03525 [Magnaporthe oryzae 70-15]
gi|440466878|gb|ELQ36121.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Magnaporthe oryzae
Y34]
gi|440479875|gb|ELQ60612.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Magnaporthe oryzae
P131]
Length = 375
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 179/318 (56%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG +GRY+V +LA+ G V+VP+R E RHLKL GDLG++V ++++ R+
Sbjct: 48 GHTATVFGATGQVGRYIVNRLARQGCTVVVPYRE-EMAKRHLKLTGDLGRVVFIEYDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR Y T+N+S EDV+ AERIA ++ + RFI +S
Sbjct: 107 TASIEESVRHSDVVYNLVGRNYPTKNFSLEDVHVEGAERIAEAVAKY-DVDRFIHVSSHN 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ SPS F TKA E+ V P TI+RPA + G ED LL K A V F +
Sbjct: 166 ANLDSPSEFFRTKARGEQVVRSIFPETTIVRPAPVFGFEDNLLLKLASVVNLFTANHM-- 223
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ PV+ +DV A+ L DD T+ G+ +EL GP +++ E+AE++ I + +
Sbjct: 224 --QQKFNPVHSIDVGEALEKMLYDDSTA-GQTFELYGPKNYSMSEIAEMVDREIFKKRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP KAV P LL +V + + + DEI D + A TF+DLG+ P
Sbjct: 281 INVP----KAVLKPVAALLNRVLW----WDIMSADEIEREFIDQEIDRTAKTFKDLGMEP 332
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ + YL +R G
Sbjct: 333 GDISKFTYNYLQGFRSGS 350
>gi|395847626|ref|XP_003796469.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Otolemur garnettii]
Length = 377
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 157/251 (62%), Gaps = 8/251 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQ++ +++N R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDFMHLRPMGDLGQLIFLEWNGR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRAVEHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A ++ F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRFLNHFAN-MRSFIGVPLI 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G QPVYVVDV+ + A+KD + GK + GP+ + + +L + +Y
Sbjct: 230 SLGLKIEKQPVYVVDVSKGIINAVKDP-DAKGKSFAFFGPNRYFLFDLVQYIYAV----A 284
Query: 245 HYVKVPFPVAK 255
H +P+P+ +
Sbjct: 285 HRPFLPYPLPR 295
>gi|384496455|gb|EIE86946.1| hypothetical protein RO3G_11657 [Rhizopus delemar RA 99-880]
Length = 375
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 176/322 (54%), Gaps = 30/322 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G IATVFG TGFLGRYVV +LA+ G+QV+V +R D+ RHLK+ GDLGQIVP++F+ R
Sbjct: 53 NGHIATVFGCTGFLGRYVVNRLAQQGTQVVVAYRD-PDEARHLKVTGDLGQIVPLEFDLR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ + + +++V NLIGR+YET+ +D +AE A G+ RF+Q+S L
Sbjct: 112 NKEQLTECVRHSDIVYNLIGRDYETKQVEEKDGTRALAEACA-----ENGVARFVQVSAL 166
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNK------WAQFVKKF 179
AS SPS+ TKA E+ +P T++RP M G EDR LN+ W +V +
Sbjct: 167 NASEDSPSKFLRTKALGEKVAREVIPETTVVRPGIMWGHEDRFLNRIGDGDGWQYWVNQ- 225
Query: 180 NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
G+T+I PV +DVA A+ L + T MGK YEL GP + V ++ EL +
Sbjct: 226 --------GNTKILPVSAIDVAQALEVMLTAEST-MGKTYELYGPKEYRVKDIYELAREI 276
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299
+ VP V K +A ++ K+P+ + D I D + ALTF
Sbjct: 277 SMQPLPIRNVPDSVLKFMAT----IVDKLPYNQQ----VSPDLIERLKMDDKPTPGALTF 328
Query: 300 QDLGIVPHKLKGYPTEYLIWYR 321
+DL I P +L+ +L +R
Sbjct: 329 KDLYIEPTQLETVAIHFLRRFR 350
>gi|255946876|ref|XP_002564205.1| Pc22g01610 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591222|emb|CAP97449.1| Pc22g01610 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 382
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/315 (38%), Positives = 178/315 (56%), Gaps = 24/315 (7%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 54 GHTATVFGATGFLGRYIVNKLARQGCTVVVPYRE-EMAKRHLKVTGDLGRVVFMEYDLRN 112
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+EDV+ ERIA ++ + RFI +S
Sbjct: 113 TQSIEESVRHSDVVYNLVGRQYPTKNFSYEDVHVDGVERIADAVAKY-DVDRFIHVSSYN 171
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A SPS F+TKA EE V + P TI+RPA M G ED LL+K A+ F +
Sbjct: 172 ARRDSPSEYFATKAWGEEIVRKIYPETTIVRPAPMFGFEDNLLHKLAKVGNVFTANHM-- 229
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV +A+ L DD T+ G+ +EL GP ++ E+AEL+ I + +
Sbjct: 230 --QERYWPVHAIDVGSALERMLHDDSTA-GETFELYGPKNYSTAEIAELVDREIIKKRRH 286
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP KAV P + K + + DE+ D ++ A TF+DLG+
Sbjct: 287 INVP----KAVLKPFAHYMNKFLW----WHTLSADEVEREFIDQVIDPTAKTFKDLGMEE 338
Query: 307 ---------HKLKGY 312
H L+GY
Sbjct: 339 TADLANLTFHYLQGY 353
>gi|259481738|tpe|CBF75541.1| TPA: NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
(AFU_orthologue; AFUA_6G12790) [Aspergillus nidulans
FGSC A4]
Length = 382
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 177/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++V ++++ R+
Sbjct: 55 GHTATVFGATGFLGRYIVNKLATQGCTVVVPYRE-EMAKRHLKVTGDLGRVVFIEYDLRN 113
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+ DV+ ERIA ++ + RFI +S
Sbjct: 114 TQSIEESVRHSDVVYNLVGRDYPTKNFSYTDVHVDGTERIAEAVAKY-DVDRFIHVSSYN 172
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ +SPS FSTK EE P TI+RPA + G EDRLL+K A F L
Sbjct: 173 ANKNSPSEFFSTKGWGEEVARSIFPETTIVRPAPLFGFEDRLLHKLASATNLFTANHL-- 230
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L DD T+ G+ +EL GP +++ E+A L+ I + +
Sbjct: 231 --QQRSWPVHAIDVGTALERMLHDD-TTAGQTFELYGPTNYSLAEIAPLVDREIVKRRRH 287
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K A +L K + +P + DE+ D + A TF+DLGI P
Sbjct: 288 INVPKRILKPAAY---LLNKYLWWP-----TISADEVEREFIDQEIDPTAKTFKDLGIEP 339
Query: 307 HKLKGYPTEYLIWYRKGG 324
+L YL YR
Sbjct: 340 AELSELTFHYLKGYRSSS 357
>gi|332372989|gb|AEE61636.1| unknown [Dendroctonus ponderosae]
Length = 399
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 154/242 (63%), Gaps = 11/242 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG+TGF+ RYV +L K+G+Q+++P+RG DP LK++GDLGQ+ +N
Sbjct: 52 FNGIVATVFGSTGFISRYVCNKLGKIGTQLILPYRGDNYDPMRLKVVGDLGQVYFHPYNL 111
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D+++I+ + +NVVINL+GR++ETRN++F V+ A R+A IAKE G+ RFI S
Sbjct: 112 KDEDSIRKVVQYSNVVINLVGRDWETRNFNFNQVHVEGARRLARIAKE-AGVERFIHFSS 170
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L AS + S+ +KA E AV E P ATI RPA + G EDR L + +
Sbjct: 171 LNASEDPEGVILKNGSKFLKSKALGEIAVWEEFPEATIFRPADVYGQEDRFLRYYLHNWR 230
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++ PL+ G + QPV+V DVA+ V AA++D S GKI++ GP + + EL +
Sbjct: 231 RQLQNMPLWDKGEKTVKQPVHVSDVASGVVAAIRDP-DSAGKIFQAVGPKRYLLSELVDY 289
Query: 236 MY 237
+Y
Sbjct: 290 IY 291
>gi|164427064|ref|XP_959794.2| NADH:ubiquinone oxidoreductase 40kD subunit [Neurospora crassa
OR74A]
gi|157071590|gb|EAA30558.2| NADH:ubiquinone oxidoreductase 40kD subunit [Neurospora crassa
OR74A]
Length = 369
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/319 (38%), Positives = 181/319 (56%), Gaps = 23/319 (7%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V++PFR E + RHLK+ GDLG++V ++F+ R+
Sbjct: 51 GHTATVFGATGQLGRYIVNRLARQGCTVVIPFRD-EYNKRHLKVTGDLGKVVMIEFDLRN 109
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NLIGR+Y T+N+SFEDV+ AERIA ++ + RFI +S
Sbjct: 110 TQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAEAVAKY-DVDRFIHVSSYN 168
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +S F+TKA E+ V P TI+RPA M G EDRLL+K A VK L
Sbjct: 169 ADPNSECEFFATKARGEQVVRSIFPETTIVRPAPMFGFEDRLLHKLAS-VKNI----LTS 223
Query: 187 DG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+G + PV+ A+ L DD T+ + +EL GP +T E++E++ I +
Sbjct: 224 NGMQEKYNPVH------ALEQMLWDDNTA-SETFELYGPKTYTTAEISEMVDREIYKRRR 276
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+V VP + K +A +L K + +P + + DEI D ++ A TF+DLGI
Sbjct: 277 HVNVPKKILKPIAG---VLNKALWWP-----IMSADEIEREFHDQVIDPEAKTFKDLGIE 328
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P + + YL YR
Sbjct: 329 PADIANFTYHYLQSYRSNA 347
>gi|451855580|gb|EMD68872.1| hypothetical protein COCSADRAFT_168071 [Cochliobolus sativus
ND90Pr]
Length = 386
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 176/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V+VPFR E RHLK+ GDLG+++ ++ + R+
Sbjct: 59 GYTATVFGATGFLGRYIVNRLARSGCTVIVPFRE-EMAKRHLKVAGDLGRVIFLEMDLRN 117
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NLIGR+Y T+N+ EDV+ ERIA ++ I RF+ +S
Sbjct: 118 TQSIEESVRHSDIVYNLIGRDYPTKNFDLEDVHVHGTERIADAVAKY-DIDRFVHVSSHS 176
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A SPS + TKA E+ P TI+RPA M G EDRLL++ A L
Sbjct: 177 ARLDSPSEFYRTKARGEQVARSIYPETTIVRPAPMFGFEDRLLHRLASPTNIITSNNL-- 234
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R++PV+V+DV A+ L DD T+ + YEL GP +++ E+ EL+ + +
Sbjct: 235 --QERLRPVHVIDVGMALERMLHDD-TTAAETYELYGPTEYSMAEMNELVEKEAMKPRRH 291
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
V VP + K +A LL +P + + DE+ D + +A TF+DL I P
Sbjct: 292 VNVPKQILKPIAHYANKLLW---WP-----IHSADEVEREFIDQEIDKSAKTFKDLEIEP 343
Query: 307 HKLKGYPTEYLIWYRKGG 324
+LK EYL YR
Sbjct: 344 VELKSMTFEYLKGYRSSS 361
>gi|396483337|ref|XP_003841683.1| similar to NADH-ubiquinone oxidoreductase 40 kDa subunit
[Leptosphaeria maculans JN3]
gi|312218258|emb|CBX98204.1| similar to NADH-ubiquinone oxidoreductase 40 kDa subunit
[Leptosphaeria maculans JN3]
Length = 388
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 179/320 (55%), Gaps = 19/320 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V+VP+R E RHLK+ GDLG+++ ++ + R+
Sbjct: 61 GYTATVFGATGFLGRYIVNRLARSGCTVIVPYRE-EMAKRHLKVTGDLGRVIFIEMDLRN 119
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NLIGR+Y T+N+ EDV+ ERIA ++ I RF+Q+S
Sbjct: 120 TQSIEESVRHSDIVYNLIGRDYPTKNFDLEDVHVEGTERIAEAVAKY-DIDRFVQVSSHS 178
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWA--QFVKKFNFFPL 184
A +SPS + TKA E+ P TI+RPA M G EDRLL++ A +V N
Sbjct: 179 ADVNSPSEFYRTKARGEQVARSIYPETTIVRPAPMFGFEDRLLHRLAYPSYVITANHL-- 236
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
R++PV+V+DV A+ L DD T+ + +EL GP +++ EL EL+ +
Sbjct: 237 ----QERLRPVHVIDVGMALEQMLHDD-TTAAETFELYGPSEYSMAELNELVEKEAMKVR 291
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
++ +P + K +A LL +P + + DE+ D + A TF+DL I
Sbjct: 292 RHINIPKRILKPIAHYANKLLW---WP-----IHSADEVEREFIDQTIDKKAKTFKDLDI 343
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P +L+ EYL YR
Sbjct: 344 EPVELRSMTFEYLRGYRSSS 363
>gi|407781897|ref|ZP_11129113.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Oceanibaculum
indicum P24]
gi|407206936|gb|EKE76880.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Oceanibaculum
indicum P24]
Length = 316
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/316 (39%), Positives = 169/316 (53%), Gaps = 11/316 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GRYVVQ+LAK G +V V R E + LK MG++GQI P+ + D
Sbjct: 5 VVTVFGGSGFIGRYVVQRLAKTGVRVNVAVRHVER-AKFLKPMGNVGQITPISCDITDAE 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ V+NL+G Y + + D H A R A + +QIS +GA
Sbjct: 64 SVARAVQGADAVVNLVGILYPSGHGHGFDAVHHQAARTIAEAAKAADARALVQISAIGAD 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S +KAA E AV P ATI+RP+ + G ED N++A + PL G G
Sbjct: 124 AESDSAYARSKAAGEAAVREVFPEATILRPSIVFGPEDGFFNRFAAMARLSPALPLIGGG 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T QPVYV DVA AV L D + GKIYELGGP ++ L ELM TI V
Sbjct: 184 HTLFQPVYVGDVADAVLRVLSDP-KAQGKIYELGGPKTYSFKALMELMLATIGRSRLLVP 242
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
VPF +A+ A ++L VP PL R D++ D +VS+ ALT DLGI P
Sbjct: 243 VPFGIAELQASVLQLL--PVP-PLTR------DQVTLLKRDNVVSEGALTLADLGIEPTT 293
Query: 309 LKGYPTEYLIWYRKGG 324
++ Y+ +R+GG
Sbjct: 294 VEVILPAYMERFRRGG 309
>gi|355706788|gb|AES02751.1| NADH dehydrogenase 1 alpha subcomplex, 9, 39kDa [Mustela putorius
furo]
Length = 376
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 148/233 (63%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV+VP+R D HL+ MGDLGQI+ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYRCDPYDTMHLRPMGDLGQIIFLEWDGR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ ++I + +NVVINL+GRE+ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 NRDSIHRAVKHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA E+ V P A I++P+ + G EDR LN +A ++ F PL
Sbjct: 171 NADIKSSSRYLRNKAVGEKEVRDVFPEAIIIKPSDIFGREDRFLNHFAN-IRWFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVYVVDV+ + A+KD S GK + GP+ + + +L + +
Sbjct: 230 SLGKKTVKQPVYVVDVSKGIINAIKDP-DSRGKSFAFVGPNRYLLFDLVQYAF 281
>gi|209966457|ref|YP_002299372.1| NADH-ubiquinone oxidoreductase subunit [Rhodospirillum centenum SW]
gi|209959923|gb|ACJ00560.1| NADH-ubiquinone oxidoreductase subunit, putative [Rhodospirillum
centenum SW]
Length = 333
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 171/325 (52%), Gaps = 15/325 (4%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
M Y Y IATVFG +GF+GR+++++LA+ G + VP R D L+ +G +GQIVP+
Sbjct: 1 MVYRYR--IATVFGGSGFIGRHLIRRLARTGCVIRVPSR-QPADAAFLRTLGSVGQIVPL 57
Query: 61 KFNPRDDNTIKATMAKANVVINLIG-REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRF 119
RDD ++ + A++VINLIG SFE V + RIA IAK+ G + R
Sbjct: 58 PVTIRDDRSLAYAIRGADLVINLIGILAPSGGGSSFEAVQAELPGRIARIAKQEG-VARL 116
Query: 120 IQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKF 179
+Q+S +GA ++SPS S+KA E VL P ATI+RP+ + G ED N++
Sbjct: 117 VQMSAIGADAASPSGYASSKAEGERRVLEAFPEATILRPSIVFGPEDGFFNRFGAMSLVS 176
Query: 180 NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
F PL G G TR QPVYV DV AV AL SMG+ YELGGP ++T EL +L+
Sbjct: 177 PFLPLIGGGKTRFQPVYVGDVCDAVMQALATP-DSMGRTYELGGPRVYTFKELMQLVLKE 235
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299
Y +++P+ +A E L K + D++ D +VS
Sbjct: 236 TGRYKRLLEIPWWLATLQGAVLEHLPGK---------MLTRDQVRLLRKDNVVSGTLPGL 286
Query: 300 QDLGIVPHKLKGYPTEYLIWYRKGG 324
+LG+ P + Y+ +R GG
Sbjct: 287 AELGVTPTAAEVIIPTYMDKFRIGG 311
>gi|56698590|ref|YP_168967.1| NADH ubiquinone oxidoreductase [Ruegeria pomeroyi DSS-3]
gi|56680327|gb|AAV96993.1| NADH ubiquinone oxidoreductase, putative [Ruegeria pomeroyi DSS-3]
Length = 327
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 172/317 (54%), Gaps = 8/317 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ H+K G +GQ+ P+ N RDDN
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMHVKPYGAVGQVEPVLCNLRDDN 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ TM A+ V+N +G E SF+ V AERIA IA E G + R + +S +GA
Sbjct: 63 SVAQTMRGADAVVNCVGVLNELGRNSFDAVQAEGAERIARIAAEQG-VARMVHVSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S +KA E VLR +P A I+RP+ + GTED+ N++A + F P+ G
Sbjct: 122 GDSDSAYSRSKALGEAGVLRHMPDAMILRPSVIFGTEDQFFNRFAGMTRFGPFLPVVG-A 180
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
TR QPVYV DVA AAV L G + G +YELGGPD+ T L + M I +
Sbjct: 181 ETRFQPVYVDDVARAAVKGVL---GQAPGGVYELGGPDVETFRALMQRMLGVIHRKRIII 237
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+PF A+ +A ++ K V F L + D++ D +VS+ A F DLGI P
Sbjct: 238 ALPFFAARIMAGMLDV-AKFVSFQLFPNNILTRDQLKNLRRDNVVSEGAKGFADLGIAPE 296
Query: 308 KLKGYPTEYLIWYRKGG 324
+ YL +R G
Sbjct: 297 PMDTVLPAYLWKFRPNG 313
>gi|359323061|ref|XP_534915.3| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial isoform 1 [Canis lupus
familiaris]
Length = 377
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 149/233 (63%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQI+ ++++ R
Sbjct: 52 SGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDPYDTMHLRPMGDLGQIIFLEWDGR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ ++I+ + +NVVINLIGRE+ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 NKDSIQRAVKHSNVVINLIGREWETKNFDFEDVFVKIPQAIAKVSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA E+ V P A I++P+ + G EDR LN +A + F PL
Sbjct: 171 NADIKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRFLNHFAN-TRWFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVYVVDV+ + A+KD + GK + GP+ + + +L + ++
Sbjct: 230 SLGKKTVKQPVYVVDVSKGIVNAIKDP-DAKGKSFAFVGPNRYLLFDLVQYVF 281
>gi|343958910|dbj|BAK63310.1| NADH dehydrogenase [Pan troglodytes]
Length = 284
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 12 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCGKYDIMHLRPMGDLGQLLFLEWDAR 71
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+NY FEDV + + IA ++KE G+ +FI +S L
Sbjct: 72 DKDSIRRVVQHSNVVINLIGRDWETKNYDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 130
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 131 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPIPLG 189
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 190 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 241
>gi|410350877|gb|JAA42042.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Pan
troglodytes]
Length = 377
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+NY FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRQVVQHSNVVINLIGRDWETKNYDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPIPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 281
>gi|384917746|ref|ZP_10017856.1| NADH-ubiquinone oxidoreductase, putative [Citreicella sp. 357]
gi|384468387|gb|EIE52822.1| NADH-ubiquinone oxidoreductase, putative [Citreicella sp. 357]
Length = 327
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 170/318 (53%), Gaps = 11/318 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GR++ +++AK+G +V V R ++ +K G +GQ+ P++ N RDD
Sbjct: 4 LVTIYGGSGFVGRHIARRMAKLGWRVRVAVR-RPNEALFVKSYGAVGQVEPVQCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M A+ V+N +G SFE + H AER+A +A G + R +QIS +GA
Sbjct: 63 SVRAVMQGADAVVNCVGTFDAKGKNSFEAIQHQGAERVARLAAAEG-VARMVQISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S +KA E+AVL +P A I+RP+ + G ED N++A + PL G
Sbjct: 122 ADSASDYARSKAQGEQAVLNHMPDAVILRPSVIFGPEDSFFNRFAGMSRMGPVLPLVG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA A A L G + IYELGGPD+ T E M IR V
Sbjct: 181 DTKFQPVYVDDVAHA--AVLGATGKAAAGIYELGGPDVGTFRAFIEQMLTVIRRRRWIVN 238
Query: 249 VPFPVAKAVAMPREIL--LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+PF +A + E L L FP P D++ + SD +VS A F DLGI P
Sbjct: 239 IPFGIAWVMGKGFETLAGLTGGLFPAP----ITSDQVASLKSDNVVSQGARGFADLGITP 294
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ +YL +R G
Sbjct: 295 TSSEAVLPDYLWRFRPSG 312
>gi|393213377|gb|EJC98873.1| NADH dehydrogenase [Fomitiporia mediterranea MF3/22]
Length = 365
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 183/322 (56%), Gaps = 26/322 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G TVFG+TGFL RY++ ++AK G++V+VP+R ED+ RHLK+MGDLGQI+P++++ R
Sbjct: 47 TGHTVTVFGSTGFLARYLISKIAKSGTRVIVPYRE-EDEKRHLKVMGDLGQIIPLEWDMR 105
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ I + ++ V NL+GR YET+N++F DV+ A IA IA E+ G+ FI +S L
Sbjct: 106 NEQQIAECLRHSDTVYNLVGRNYETKNFNFHDVHVNGAASIARIAAEN-GVDNFIHVSHL 164
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ +SPS+ ++TK E V P AT++RPA M G EDRLL A++ +
Sbjct: 165 NAAPNSPSKFYATKYEGELRVQEAFPGATVVRPATMFGYEDRLLTNMARWPIWWG----L 220
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM----YDTIR 241
G T+I+PV+V+DVA A+T L +G+ L GP T L EL+ Y+ +
Sbjct: 221 NQGDTKIRPVHVMDVAQALTNLLSK--PPVGRTLSLPGPSTLTHEYLLELIASVTYNPVS 278
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
+ P +P PVA A+A + P DE+ D +D +
Sbjct: 279 KAP---SLPKPVALALAKVSNFVWWPTVVP---------DEVERRFIDD--ADTPGDWDV 324
Query: 302 LGIVPHKLKGYPTEYLIWYRKG 323
+G+VP +++ + +YL +R
Sbjct: 325 VGVVPDEVETFAIKYLRRFRSA 346
>gi|120952151|ref|NP_001073383.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial precursor [Pan troglodytes]
gi|115502294|sp|Q0MQB4.1|NDUA9_PANTR RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
gi|111662264|gb|ABH12229.1| mitochondrial complex I subunit NDUFA9 [Pan troglodytes]
gi|410256262|gb|JAA16098.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Pan
troglodytes]
gi|410292422|gb|JAA24811.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Pan
troglodytes]
Length = 377
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+NY FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRVVQHSNVVINLIGRDWETKNYDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPIPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 281
>gi|58266304|ref|XP_570308.1| NADH dehydrogenase (ubiquinone) [Cryptococcus neoformans var.
neoformans JEC21]
gi|134111304|ref|XP_775794.1| hypothetical protein CNBD5230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258458|gb|EAL21147.1| hypothetical protein CNBD5230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226541|gb|AAW43001.1| NADH dehydrogenase (ubiquinone), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 411
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 155/254 (61%), Gaps = 7/254 (2%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG TVFG+TGFL RY++Q+LA+ G+QV+VP+R ED+ R L+ GDLGQIVP++++ R
Sbjct: 59 SGRTVTVFGSTGFLARYLIQKLARQGTQVIVPYRD-EDEKRRLRPCGDLGQIVPLEWDAR 117
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ A+VV NL+GR+YETRNYS++DVN +A+ IA I+ + I R I +S +
Sbjct: 118 IPEQTAECVKHADVVYNLVGRDYETRNYSYDDVNVKVAQSIAEISADM-NIPRLIHVSHI 176
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ SPS + TK A E AV P ATI+RP+ + G ED LLN + ++
Sbjct: 177 NANPESPSEFYRTKYAGERAVRDAFPEATIVRPSQLFGHEDWLLNA----IARYPILCKL 232
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYP 244
+G+T++ PV+VVDVA A+ TS + L GP+++ EL L+ T+R
Sbjct: 233 NNGNTKLFPVHVVDVAQALNLMFDAPVTSTASTFVLPGPELYNYAELERLVSALTLRPIS 292
Query: 245 HYVKVPFPVAKAVA 258
+P PVAK +A
Sbjct: 293 SAPSLPKPVAKFLA 306
>gi|58257457|gb|AAW69350.1| NADH-ubiquinone oxidoreductase 40 kDa subunit-like protein
[Magnaporthe grisea]
Length = 375
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 178/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG +GRY+V +LA+ G V+VP+R E RHLKL GDLG++V ++++ R+
Sbjct: 48 GHTATVFGATGQVGRYIVNRLARQGCTVVVPYRE-EMAKRHLKLTGDLGRVVFIEYDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR Y T+N+S EDV+ AERIA ++ + RFI +S
Sbjct: 107 TASIEESVRHSDVVYNLVGRNYPTKNFSLEDVHVEGAERIAEAVAKY-DVDRFIHVSSHN 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ SPS F TKA E+ V P TI+RPA + G ED LL K A V F +
Sbjct: 166 ANLDSPSEFFRTKARGEQVVRSIFPETTIVRPAPVFGFEDNLLLKLASVVNLFTANHM-- 223
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ PV+ +DV A+ L DD T+ G+ EL GP +++ E+AE++ I + +
Sbjct: 224 --QQKFNPVHSIDVGEALEKMLYDDSTA-GQTLELYGPKNYSMSEIAEMVDREIFKNRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP KAV P LL +V + + + DEI D + A TF+DLG+ P
Sbjct: 281 INVP----KAVLKPVAALLNRVLW----WDIMSADEIEREFIDQEIDRTAKTFKDLGMEP 332
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ + YL +R G
Sbjct: 333 GDISKFTYNYLQGFRSGS 350
>gi|397499393|ref|XP_003820438.1| PREDICTED: probable polypeptide N-acetylgalactosaminyltransferase 8
[Pan paniscus]
Length = 854
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+NY FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRVVQHSNVVINLIGRDWETKNYDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPIPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 281
>gi|402884841|ref|XP_003905881.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 14-like
[Papio anubis]
Length = 671
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 151/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L ++GSQV++P+R D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRIGSQVIIPYRCDIYDTMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRAVEHSNVVINLIGRDWETKNFDFEDVYVKIPQAIAQVSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+AV P A I++P+ + G EDR LN +A +++F P+
Sbjct: 171 NANIKSSSRYLRNKAVGEKAVRDAFPEAIIIKPSDIFGREDRFLNSFAH-LRQFVLIPIG 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
T + QPVYVVDV+ + +KD S GK + GP+ + + L + ++
Sbjct: 230 SLSWTTVKQPVYVVDVSKGIVNIVKDPDAS-GKTFAFVGPNRYLLFHLVKYVF 281
>gi|321257130|ref|XP_003193480.1| NADH dehydrogenase (ubiquinone) [Cryptococcus gattii WM276]
gi|317459950|gb|ADV21693.1| NADH dehydrogenase (ubiquinone), putative [Cryptococcus gattii
WM276]
Length = 411
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 155/254 (61%), Gaps = 7/254 (2%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG A VFG+TGFL RY++Q+LA+ G+QV+VP+R ED+ R L+ GDLGQIVP++++ R
Sbjct: 59 SGRTAAVFGSTGFLARYLIQKLARQGTQVIVPYRD-EDEKRRLRPCGDLGQIVPLEWDAR 117
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ A+VV NL+GR+YETRNYS++DVN +A+ IA I+ + GI R I +S +
Sbjct: 118 IPEQTAECVKHADVVYNLVGRDYETRNYSYDDVNVKVAQSIAEISADM-GIPRLIHVSHI 176
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S S + TK A E AV P ATI+RP+ + G ED LLN + +F
Sbjct: 177 NANPESTSEFYRTKYAGERAVRDAFPEATIVRPSQLFGHEDWLLNA----IARFPILAKL 232
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYP 244
+G+T+ P +VVDVA A+ TS + L GP+++T EL +L+ T+R
Sbjct: 233 NNGNTKFFPAHVVDVAQALNLMFDAPVTSTASTFVLPGPELYTYGELEKLVSALTLRPLS 292
Query: 245 HYVKVPFPVAKAVA 258
+P PVAK +A
Sbjct: 293 SAPSLPKPVAKFLA 306
>gi|83950651|ref|ZP_00959384.1| NADH ubiquinone oxidoreductase, putative [Roseovarius nubinhibens
ISM]
gi|83838550|gb|EAP77846.1| NADH ubiquinone oxidoreductase, putative [Roseovarius nubinhibens
ISM]
Length = 326
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 171/316 (54%), Gaps = 7/316 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
I T++G +GF+GRY+ ++LAK G ++ V R ++ H+K G +GQ+ P+ N RDD
Sbjct: 4 IVTIYGGSGFVGRYIARRLAKQGWRIRVAVR-RPNEAMHVKPYGVVGQVEPILCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M + V+N +G +F+ V H AER+A IA E G + R +QIS +GA
Sbjct: 63 SVRAAMQGVDAVVNCVGTFDARGKNNFDAVQHEGAERVARIAAEEG-VARLVQISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ + S +K EEAVL P A I+RP+ + G ED N++A + P+ G
Sbjct: 122 TQAASDYARSKGLGEEAVLGHFPSAVILRPSVIFGPEDGFFNRFAGMTRLGPVLPVVG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA A + +G + IYELGGPD+ + EL + M IR +
Sbjct: 181 ETKFQPVYVDDVAKAAVEGV--EGRAAPGIYELGGPDVNSFRELMQQMLGVIRRRRLVIN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+PF +A +AM E +PR + D++ + D +VS+ A F DLGI P
Sbjct: 239 IPFVLAGPMAMLIEWAHMLSLGIVPR--MITRDQVTSLREDNVVSEGARGFADLGITPVS 296
Query: 309 LKGYPTEYLIWYRKGG 324
L+ +YL +R G
Sbjct: 297 LEAVLPDYLWRFRPSG 312
>gi|452005026|gb|EMD97482.1| hypothetical protein COCHEDRAFT_1084110 [Cochliobolus
heterostrophus C5]
Length = 386
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 176/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V+VPFR E RHLK+ GDLG+++ ++ + R+
Sbjct: 59 GYTATVFGATGFLGRYIVNRLARSGCTVIVPFRE-EMAKRHLKVAGDLGRVIFLEMDLRN 117
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NLIGR+Y T+N+ EDV+ ERIA ++ I RF+ +S
Sbjct: 118 TASIEESVRHSDIVYNLIGRDYPTKNFELEDVHVHGTERIADAVAKY-DIDRFVHVSSHS 176
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A SPS + TKA E+ P TI+RPA M G EDRLL++ A L
Sbjct: 177 ARLDSPSEFYRTKARGEQVARSIYPETTIVRPAPMFGFEDRLLHRLASPTNIITSNNL-- 234
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R++PV+V+DV A+ L DD T+ + YEL GP +++ E+ EL+ + +
Sbjct: 235 --QERLRPVHVIDVGMALERMLHDD-TTAAETYELYGPTEYSMAEMNELVEKEAMKPRRH 291
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K +A LL +P + + DE+ D + +A TF+DL I P
Sbjct: 292 INVPKQILKPIAHYANKLLW---WP-----IHSADEVEREFIDQEIDKSAKTFKDLEIEP 343
Query: 307 HKLKGYPTEYLIWYRKGG 324
+LK EYL YR
Sbjct: 344 VELKSMTFEYLKGYRSSS 361
>gi|111662268|gb|ABH12231.1| mitochondrial complex I subunit NDUFA9 [Pongo pygmaeus]
Length = 381
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQ++ ++++ R
Sbjct: 56 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQLLFLEWDAR 115
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ETRN+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 116 DKDSIRRVVQHSNVVINLIGRDWETRNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 174
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 175 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPTPLG 233
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP+ + + L + ++
Sbjct: 234 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPNRYLLFHLVKYIF 285
>gi|197098884|ref|NP_001127602.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial precursor [Pongo abelii]
gi|269969371|sp|P0CB81.1|NDUA9_PONAB RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
gi|269969372|sp|P0CB82.1|NDUA9_PONPY RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
gi|55732390|emb|CAH92896.1| hypothetical protein [Pongo abelii]
Length = 377
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ETRN+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRVVQHSNVVINLIGRDWETRNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPTPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP+ + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPNRYLLFHLVKYIF 281
>gi|119609244|gb|EAW88838.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa,
isoform CRA_b [Homo sapiens]
Length = 399
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 74 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 133
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 134 DKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 192
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 193 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFAS-MHRFGPIPLG 251
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 252 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 303
>gi|84514712|ref|ZP_01002076.1| NADH ubiquinone oxidoreductase, putative [Loktanella vestfoldensis
SKA53]
gi|84511763|gb|EAQ08216.1| NADH ubiquinone oxidoreductase, putative [Loktanella vestfoldensis
SKA53]
Length = 326
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/316 (37%), Positives = 172/316 (54%), Gaps = 7/316 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRY+ +++A+ G +V V R ++ ++ G +GQ+ P+ N RDD
Sbjct: 4 LVTIFGGSGFVGRYIARRMAQNGWRVRVAVRNT-NEAMFVRTYGAVGQVEPVFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A A+ V+N +G E R +F V A RIA IA E G + R +QIS +GAS
Sbjct: 63 SVAAVTHGADAVVNCVGVLAELRKNTFAAVQAEGATRIARIAAEMG-VARMVQISAIGAS 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+S S TKAA E+ VL +P A I+RP+ + G ED+ N++A + P+ G
Sbjct: 122 DTSVSAYARTKAAGEQGVLDHMPDAMILRPSIIFGAEDQFFNRFAGMTRLGPVLPVIG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVAAA + G G IYELGGPD+ T EL + M +R +
Sbjct: 181 DTQFQPVYVDDVAAAAVKGVL--GEVPGGIYELGGPDVATFRELMQTMLAVVRRRRMILN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+PF A+ +A I L+ V L P + D++ D +VSD A F DLGIVP
Sbjct: 239 MPFWAARIMAGAFNI-LRIVSLGLVTPPV-TRDQVENLALDNVVSDGAKGFADLGIVPTA 296
Query: 309 LKGYPTEYLIWYRKGG 324
+ +YL +R G
Sbjct: 297 MMAVLPDYLWRFRPSG 312
>gi|291232472|ref|XP_002736180.1| PREDICTED: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex,
9-like [Saccoglossus kowalevskii]
Length = 253
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 134/195 (68%), Gaps = 4/195 (2%)
Query: 5 YSGIIATVFG-TTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
+SG+IATVFG +TGF+GRYV+ +L + GSQ++VP+R DD RHLK+MGDLGQI+P+ F+
Sbjct: 58 FSGVIATVFGGSTGFVGRYVINRLGREGSQIIVPYRCDPDDIRHLKVMGDLGQIIPLTFD 117
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
D++++ M +NVVINL+G++YETRNY FED++ +A R+A IA E I R I +S
Sbjct: 118 VNSDDSLREMMQHSNVVINLMGKDYETRNYRFEDIHIDIAGRVASIASEL-KIPRLIHLS 176
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
LG+ SPS+ TKAA E V E P TI+RPA + G EDR N +A + F P
Sbjct: 177 ALGSDWKSPSKFLRTKAAGETIVKNEYPNVTILRPAQIYGREDRYFNDYANH-RFFGGVP 235
Query: 184 LFGDGSTRI-QPVYV 197
L+ G+ + QP+YV
Sbjct: 236 LYPGGTKAVKQPLYV 250
>gi|13097156|gb|AAH03351.1| Similar to NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9
(39kD), partial [Homo sapiens]
Length = 338
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 13 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 72
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 73 DKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 131
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 132 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFAS-MHRFGPIPLG 190
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 191 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 242
>gi|296419789|ref|XP_002839474.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635635|emb|CAZ83665.1| unnamed protein product [Tuber melanosporum]
Length = 367
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/319 (36%), Positives = 181/319 (56%), Gaps = 18/319 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V++P+R E RHLK+ GDLG++V M+++ R+
Sbjct: 41 GHTATVFGATGFLGRYIVNRLARSGCTVVIPYRE-EMAKRHLKVTGDLGRVVFMEWDMRN 99
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIA-GIAKEHGGIMRFIQISCL 125
+I+A++ +++V NL+GR+Y T+N+++EDV+ +RIA IAK + RFIQ+S
Sbjct: 100 TPSIEASVRHSDIVFNLVGRDYTTKNFTYEDVHVEATQRIAEAIAKY--DVDRFIQVSSF 157
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A +SPS+ ++TK AEE P TI+RP M G EDRLL++ A F
Sbjct: 158 NADKNSPSKYYATKGQAEEDARAIFPETTIVRPGPMYGFEDRLLHRLAGTTNIFT----A 213
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ +++PV+V+DV A+ DD T+ + +EL GP T+ E+A ++ + +
Sbjct: 214 NNMQQKMRPVHVIDVGKALEVIAYDDATA-SQTFELYGPRELTLKEIAHMVDKIVHKTHR 272
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
++ +P + +A +L + +P P DEI D + A TF DLGI
Sbjct: 273 HINLPKKAFQMIAS----VLDYLWWPTISP-----DEIERQHLDHKIDATAKTFGDLGIE 323
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P ++ +Y+ YR
Sbjct: 324 PTDIEADMFQYIRHYRSAA 342
>gi|111662266|gb|ABH12230.1| mitochondrial complex I subunit NDUFA9 [Gorilla gorilla]
Length = 381
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 56 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 115
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 116 DKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 174
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 175 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPIPLG 233
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 234 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 285
>gi|115502293|sp|Q0MQB3.2|NDUA9_GORGO RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
Length = 377
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPIPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 281
>gi|169617642|ref|XP_001802235.1| hypothetical protein SNOG_12004 [Phaeosphaeria nodorum SN15]
gi|111059296|gb|EAT80416.1| hypothetical protein SNOG_12004 [Phaeosphaeria nodorum SN15]
Length = 388
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/321 (37%), Positives = 179/321 (55%), Gaps = 21/321 (6%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V++PFR E RHLK+ GDLG+++ ++ + R+
Sbjct: 61 GYTATVFGATGFLGRYIVNRLARSGCTVIIPFRE-EMAKRHLKVAGDLGRVIFLEMDLRN 119
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NLIGR+Y T+N+ EDV+ ERI ++ I RF+Q+S
Sbjct: 120 TASIEESVRHSDIVYNLIGRDYPTKNFDLEDVHVHGTERIVEAVAKY-DIDRFVQVSSHS 178
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWA---QFVKKFNFFP 183
AS SPS + TKA E+ P TI+RPA M G EDRLL++ A V N
Sbjct: 179 ASLDSPSDFYRTKAQGEQLARSIYPETTIVRPAPMFGFEDRLLHRLAYPSNIVTSNNL-- 236
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
R++PV+V+DVA A+ L+DD T+ + YEL GP +++ E+ +L+ +
Sbjct: 237 -----QERLRPVHVIDVAMALEHMLQDD-TTAAETYELYGPTEYSMAEINDLVEKEAMKK 290
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
+V VP + K +A K + +P + + DE+ D V A TF+DL
Sbjct: 291 RGHVNVPKGLMKPIATYAN---KFIWWP-----IHSGDEVEREFIDQTVDPKAKTFKDLD 342
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P +LK EYL YR
Sbjct: 343 IEPVELKSLTFEYLKGYRSSN 363
>gi|6681764|ref|NP_004993.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial precursor [Homo sapiens]
gi|2833280|sp|Q16795.2|NDUA9_HUMAN RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
gi|5326823|gb|AAD42055.1|AF050641_1 NADH-ubiquinone oxidoreductase 39kDa subunit [Homo sapiens]
gi|14424566|gb|AAH09311.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Homo
sapiens]
gi|16198380|gb|AAH15837.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Homo
sapiens]
gi|84798786|gb|AAI11547.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Homo
sapiens]
gi|119609243|gb|EAW88837.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa,
isoform CRA_a [Homo sapiens]
gi|312150544|gb|ADQ31784.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
[synthetic construct]
Length = 377
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFAS-MHRFGPIPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 281
>gi|189049|gb|AAA36350.1| NADH dehydrogenase (ubiquinone), partial [Homo sapiens]
Length = 375
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 50 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 109
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 110 DKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 168
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 169 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFAS-MHRFGPIPLG 227
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 228 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 279
>gi|67526521|ref|XP_661322.1| hypothetical protein AN3718.2 [Aspergillus nidulans FGSC A4]
gi|40740736|gb|EAA59926.1| hypothetical protein AN3718.2 [Aspergillus nidulans FGSC A4]
Length = 779
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 175/311 (56%), Gaps = 15/311 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++V ++++ R+
Sbjct: 122 GHTATVFGATGFLGRYIVNKLATQGCTVVVPYRE-EMAKRHLKVTGDLGRVVFIEYDLRN 180
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+ DV+ ERIA ++ + RFI +S
Sbjct: 181 TQSIEESVRHSDVVYNLVGRDYPTKNFSYTDVHVDGTERIAEAVAKY-DVDRFIHVSSYN 239
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ +SPS FSTK EE P TI+RPA + G EDRLL+K A F L
Sbjct: 240 ANKNSPSEFFSTKGWGEEVARSIFPETTIVRPAPLFGFEDRLLHKLASATNLFTANHL-- 297
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L DD T+ G+ +EL GP +++ E+A L+ I + +
Sbjct: 298 --QQRSWPVHAIDVGTALERMLHDD-TTAGQTFELYGPTNYSLAEIAPLVDREIVKRRRH 354
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K A +L K + +P + DE+ D + A TF+DLGI P
Sbjct: 355 INVPKRILKPAAY---LLNKYLWWP-----TISADEVEREFIDQEIDPTAKTFKDLGIEP 406
Query: 307 HKLKGYPTEYL 317
+L YL
Sbjct: 407 AELSELTFHYL 417
>gi|260429019|ref|ZP_05782996.1| NADH dehydrogenase [Citreicella sp. SE45]
gi|260419642|gb|EEX12895.1| NADH dehydrogenase [Citreicella sp. SE45]
Length = 327
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 174/320 (54%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRYV +++AK+G +V V R ++ +K G +GQ+ P+ N RDD+
Sbjct: 4 LVTIYGGSGFVGRYVARRMAKLGWRVRVAVR-RPNEAIFVKPYGVVGQVEPVLCNIRDDD 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M A+ V+N +G SF+ V H AERIA IA E G + R +QIS +GA
Sbjct: 63 SVRAVMQGADAVVNCVGTFDAKGKNSFDAVQHEGAERIARIAAEQG-VARMVQISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TKA EEAVL+ +P A I+RP+ + G +D+ N++A + PL G
Sbjct: 122 ADSASGYARTKALGEEAVLKHMPDAVILRPSVIFGPDDQFFNRFASMSRMGPVLPLVG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA A A + G + +YELGGPD + +L M IR
Sbjct: 181 DTKFQPVYVDDVAHA--AVMGVTGEAAPGVYELGGPDAESFRDLIGQMLSVIRRRRFVAN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL----DEINAYTSDTIVSDNALTFQDLGI 304
+PF +A + E+L GLF D++ + D +VSD A F++LGI
Sbjct: 239 IPFGLASIMGWSFELLQTLT------GGLFKAQITRDQVKSLRRDNVVSDGARGFKELGI 292
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P ++ +YL +R G
Sbjct: 293 APTSMEAVLPDYLWRFRPSG 312
>gi|195127640|ref|XP_002008276.1| GI13402 [Drosophila mojavensis]
gi|193919885|gb|EDW18752.1| GI13402 [Drosophila mojavensis]
Length = 417
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 178/331 (53%), Gaps = 30/331 (9%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG TGF+GRYV +L K GSQ+++P+RG + D LK+ GDLGQ++ ++
Sbjct: 62 FNGIVATVFGATGFVGRYVCNKLGKSGSQMILPYRGDDSDAIRLKVCGDLGQVLFHFYHL 121
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D +I+ + +NVVINL+GR+YET+N+ F+DVN A R+A I +E G+ RFI +S
Sbjct: 122 DDPRSIREAVKHSNVVINLVGRDYETKNFRFKDVNVNGAARLASICRE-SGVERFIHLSA 180
Query: 125 LGASS-------SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L A + S S+ TK E V P ATI+RPA + G+EDR L +A +
Sbjct: 181 LNAEANPKPHYISGGSQWLKTKYEGELMVRDAFPNATIIRPADIYGSEDRFLRYYAHIWR 240
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G + QPVYV DVA A+ A KD T+ G+IY+ GP + + EL +
Sbjct: 241 RQFRSMPLWHKGERTVKQPVYVSDVAQAIVNAAKDPDTA-GRIYQAVGPKRYQLSELVDW 299
Query: 236 MYDTIRE------YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSD 289
+ +R+ Y Y P K ++ P G +LD +
Sbjct: 300 FHRLMRKDQKGWGYQRYDMRWDPTFKLKVKLTNLICPGAPI-----GGLHLDRVEREAVT 354
Query: 290 TIVSDNALTFQDLGI--------VPHKLKGY 312
V T +DLG+ VP +L+ Y
Sbjct: 355 DKVLPGVPTLEDLGVQLTNMEDQVPWELRPY 385
>gi|336363762|gb|EGN92135.1| 39kDa subunit of Ndufa9, NADH ubiquinone oxidoreductase [Serpula
lacrymans var. lacrymans S7.3]
gi|336382839|gb|EGO23989.1| 39kDa subunit of NDUFA9, NADH:ubiquinone oxidoreductase [Serpula
lacrymans var. lacrymans S7.9]
Length = 382
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 184/340 (54%), Gaps = 43/340 (12%)
Query: 6 SGIIATVFGTTGFLGRYVVQQL-------------------AKMGSQVLVPFRGCEDDPR 46
SG + TVFG TGFLGRY+V QL AKMG+QV+VP+R ED+ R
Sbjct: 46 SGHVVTVFGCTGFLGRYLVSQLGELKFSFSRELEMVIFCVTAKMGTQVVVPYRE-EDEKR 104
Query: 47 HLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERI 106
HLK MGDLGQIVP++++ R++N I + +++V NL+GR+YET+N+ + V+ AERI
Sbjct: 105 HLKPMGDLGQIVPLEWDLRNENQIAECLRHSDIVYNLVGRDYETKNFDYSSVHVDGAERI 164
Query: 107 AGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTED 166
A IA E G+ R + +S L ASS+S S+ + TKA EE V + P ATI+RPA++ G ED
Sbjct: 165 AKIAAE-VGVQRLVHVSHLNASSNSSSQYYRTKAEGEERVRKVFPSATIVRPASLFGYED 223
Query: 167 RLLNKWAQF--VKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP 224
+ LN A + K N+ G TRI+PV+V+DVA A+ + + L GP
Sbjct: 224 KFLNNMAIWPIWWKLNY------GETRIRPVHVMDVAQALANLMSI--PQLSGTLNLPGP 275
Query: 225 DIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN 284
+ T L +L+ P V V K +A+ + +P+ P DE+
Sbjct: 276 NALTFEYLLDLVSSVTYGPPSRAPV---VPKRIALLIAKAAQAAWWPILSP-----DEVE 327
Query: 285 -AYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKG 323
Y DT V + + +G+ P +++ YL YR
Sbjct: 328 RRYIDDTDVPGD---WAAVGVTPEEIENLAITYLRRYRSA 364
>gi|431892126|gb|ELK02573.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Pteropus alecto]
Length = 377
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 154/249 (61%), Gaps = 8/249 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQ+++P R D HL+ MGDLGQI+ +++N R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQIIIPHRCERYDIMHLRPMGDLGQIIFLEWNGR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ ++I+ + +NVVINL+GR++ET+NY FEDV + + IA ++KE G+ + I +S L
Sbjct: 112 NKDSIRRAVEHSNVVINLVGRDWETKNYDFEDVFVKIPQAIAQVSKE-AGVEKLIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA E+ V P ATI+ P+ + G EDR LN +A ++ F PL
Sbjct: 171 NADIKSSSRYLRNKAVGEKEVRNAFPEATIIMPSDIFGREDRFLNYFAN-IRWFGGVPLI 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G T QPVYVVDV+ + A+K+ + GK + GP+ + +++L + +
Sbjct: 230 SLGMKTVKQPVYVVDVSKGIINAIKEP-DARGKSFAFVGPNRYLLYDLVQYAFAV----A 284
Query: 245 HYVKVPFPV 253
H +P+P+
Sbjct: 285 HRPFLPYPL 293
>gi|195021200|ref|XP_001985349.1| GH14554 [Drosophila grimshawi]
gi|193898831|gb|EDV97697.1| GH14554 [Drosophila grimshawi]
Length = 417
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 179/331 (54%), Gaps = 30/331 (9%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG TGF+GRYV +L K G+Q+++P+RG E D LK+ GDLGQ++ +N
Sbjct: 62 FNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDESDVIRLKVCGDLGQVLFHFYNL 121
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D +I+ + +NVVINL+GR+YET+N+ F+DVN A R+A I ++ G+ RFI +S
Sbjct: 122 EDPRSIRDAVKHSNVVINLVGRDYETKNFKFKDVNVNGAARLASICRD-SGVERFIHLSA 180
Query: 125 LGASS-------SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L A + S S+ +K E V P ATI+RPA + G+EDR L +A +
Sbjct: 181 LNAEANPKAHCISGGSQWLKSKYEGELQVRDAFPNATIIRPADIYGSEDRFLRYYAHIWR 240
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ +G + QPV+V DVA A+ A KD S G+IY+ GP + + EL +
Sbjct: 241 RQFRSMPLWHNGELTVKQPVFVSDVAQAIVNAAKDP-DSAGRIYQAVGPKRYQLSELVDW 299
Query: 236 MYDTIRE------YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSD 289
+ +R+ Y Y P K A ++ P G +LD I
Sbjct: 300 FHRLMRKDQKRWGYQRYDMRWDPTFKLKARLTSLICPGAPV-----GGLHLDRIEREAIT 354
Query: 290 TIVSDNALTFQDLGI--------VPHKLKGY 312
V T +DLG+ VP +L+ Y
Sbjct: 355 DKVLPGVPTLEDLGVQLTTMEEQVPWELRPY 385
>gi|405120398|gb|AFR95169.1| NADH dehydrogenase [Cryptococcus neoformans var. grubii H99]
Length = 411
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 155/254 (61%), Gaps = 7/254 (2%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG TVFG+TGFL RY++Q+LA+ G+QV+VP+R ED+ R L+ GDLGQIVP++++ R
Sbjct: 59 SGRTVTVFGSTGFLARYLIQKLARQGTQVIVPYRD-EDEKRRLRPCGDLGQIVPLEWDAR 117
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ A+VV NL+GR+YETRNYS++DVN +A+ IA I+ + I R I +S +
Sbjct: 118 IPEQTAECVKHADVVYNLVGRDYETRNYSYDDVNVKVAQSIAEISADL-NIPRLIHVSHI 176
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S S + TK A E AV P ATI+RP+ + G ED LLN + +F
Sbjct: 177 NANPESTSEFYRTKYAGERAVRDAFPEATIVRPSQLFGHEDWLLNA----IARFPILCKL 232
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYP 244
+G+T++ PV+VVDVA A+ TS + L GP+++ EL +L+ T+R
Sbjct: 233 NNGNTKLFPVHVVDVAQALNLMFDAPVTSTASTFVLPGPELYNYAELEKLVSALTLRPMS 292
Query: 245 HYVKVPFPVAKAVA 258
+P PVAK +A
Sbjct: 293 SAPSLPKPVAKFLA 306
>gi|344277791|ref|XP_003410681.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Loxodonta africana]
Length = 380
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/266 (40%), Positives = 158/266 (59%), Gaps = 8/266 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R D +L+ MGDLGQI+ +++N R
Sbjct: 55 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDLMYLRPMGDLGQIIFLEWNGR 114
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINL+G+++ETRN+ FEDV + + IA ++KE G+ R I +S L
Sbjct: 115 DKDSIRRAVEHSNVVINLVGQDWETRNFDFEDVFVKIPQAIAQVSKE-AGVERLIHVSHL 173
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA E+ V P ATI++P+ + G EDR LN +A + F PL
Sbjct: 174 NADIKSSSRYLRNKAVGEKEVRDTFPEATIIKPSDIFGREDRFLNYFAG-GRWFGGMPLV 232
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G QPVYVVDVA + A+KD + GK + GP+ + + +L + ++
Sbjct: 233 FLGLRAEKQPVYVVDVAKGIVNAIKDP-DACGKTFAFTGPNRYLLLDLVQYVFAVT---- 287
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPF 270
H P+P+ + L + PF
Sbjct: 288 HRSFFPYPLPRFTYQLIARLFEMSPF 313
>gi|351696891|gb|EHA99809.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Heterocephalus glaber]
Length = 377
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 149/233 (63%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV +L +MGSQV++P+R D L+ MGDLGQ+ ++++ R
Sbjct: 52 SGVVATVFGATGFLGRYVVNRLGRMGSQVIIPYRCDTYDIMRLRPMGDLGQLTFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++++ + +NVVINL+GR++ET N+ FEDV + + IA ++KE G+ + I +S L
Sbjct: 112 DRDSVRRAVQHSNVVINLVGRDWETTNFDFEDVFVKIPQAIAQVSKE-AGVEKLIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S S+ KA E+ V P ATI++P+ + G EDR LN++A ++ F PL
Sbjct: 171 NADIKSSSKYLRNKAVGEKEVRDAFPEATIIKPSDIFGREDRFLNRFAN-MRYFVGLPLI 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDVAA + A+KD + GK + GP + + +L + +Y
Sbjct: 230 SLGLKTVKQPVYVVDVAAGIVNAIKDP-DAKGKTFAFAGPSRYLLFDLMQYIY 281
>gi|242789921|ref|XP_002481461.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Talaromyces stipitatus ATCC 10500]
gi|218718049|gb|EED17469.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Talaromyces stipitatus ATCC 10500]
Length = 382
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 176/315 (55%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V+VPFR E RHLK+ GDLG++V M+++ R+
Sbjct: 55 GHTATVFGATGFLGRYIVNRLARAGCTVVVPFRE-EMTKRHLKVSGDLGRVVFMEYDLRN 113
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+++EDV+ AERIA ++ + RFI +S
Sbjct: 114 TQSIEESVRHSDVVFNLVGRQYPTKNFTYEDVHVDGAERIAEAVAKY-DVDRFIHVSSYN 172
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ SPS F TK E V P TI+RPA M G ED LL+K A F +
Sbjct: 173 AAEDSPSEYFRTKGWGERVVREIFPETTIVRPAPMFGFEDNLLHKLAGVTNLFTANHM-- 230
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ PV+ +DV A+ DD T+ + +EL GP ++ E+AE++ I ++ +
Sbjct: 231 --KEKYWPVHAIDVGTALERMAYDDNTA-SQTFELYGPKQYSTAEIAEIVDKEIVKHRRH 287
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P KA+ P L K L P + + DE+ D + A TF+DL I P
Sbjct: 288 INLP----KAILKPAAYYLNKY---LWWPTI-SADEVEREFIDQHIDPTAKTFKDLDIEP 339
Query: 307 HKLKGYPTEYLIWYR 321
++ YL+ YR
Sbjct: 340 AEITSLTYLYLMGYR 354
>gi|403282417|ref|XP_003932646.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Saimiri boliviensis
boliviensis]
Length = 377
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 156/252 (61%), Gaps = 8/252 (3%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ M+++
Sbjct: 51 FSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFMEWDS 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD ++I+ + +NVVINLIGR++ET+ + + DV + + IA +KE G+ +FI +S
Sbjct: 111 RDKDSIRRAVQHSNVVINLIGRDWETKYFDYADVYVKIPQAIAQASKE-AGVEKFIHVSH 169
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L A S S+ KA E V P A I++P+ + G EDR LN ++ +++F PL
Sbjct: 170 LNADVRSSSKYMRNKAVGEAVVREAFPEAIIIKPSDIFGREDRFLNHFSN-IRRFIGVPL 228
Query: 185 FGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
G T QPVYV DV+ + A+KD S GK + GP+ + + +L + +Y
Sbjct: 229 VSLGWKTVKQPVYVSDVSKGIINAVKDPHVS-GKTFVFVGPNRYLLFDLVKYVYSVT--- 284
Query: 244 PHYVKVPFPVAK 255
H + +P+P+ +
Sbjct: 285 -HRLFLPYPIPR 295
>gi|428185018|gb|EKX53872.1| hypothetical protein GUITHDRAFT_160957 [Guillardia theta CCMP2712]
Length = 381
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 179/342 (52%), Gaps = 30/342 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR-GCEDDPRHLKLMGDLGQIVPMKFNP 64
+G++ATVFG+TGF+ RYVV +L ++G+Q +VP R ED RHLK+MGDLG IVPM F+
Sbjct: 35 TGVVATVFGSTGFVARYVVNKLGRVGTQCVVPHRIYSEDRGRHLKVMGDLGMIVPMPFHA 94
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD +I + +++VVINL+G++ +T N+ F N +A I+KE G+ RFI +S
Sbjct: 95 RDPESIAECVKESDVVINLMGKQEKTFNFDFFGSNVEAVSTLAKISKE-CGVPRFIHLSS 153
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+ A S S KA E+AVL P A I+R + G ED+ LN A++ + + + P+
Sbjct: 154 VAADEQSESTWLRCKALGEKAVLDYYPNAAILRSNVIFGEEDKFLNNMAKWARIYGYVPI 213
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT----- 239
G G + P+YV DVA A+ A DD G+I EL GP+ +T+ ++A + +T
Sbjct: 214 IGSGKNIVHPIYVDDVAEAIRACTYDDSYD-GQIVELNGPEAWTLPDIANWVRETCWIAE 272
Query: 240 ---IREYPHYVKVPFPVAKAVAMPREIL-------LKKVPFPLPRP-------GLFNLDE 282
IR +P + P + P ++ L P + P G F
Sbjct: 273 TSRIRRFPDLSEY-LPESLKHLSPHNMVGGITDSYLGLWPSDVFGPMSMLGIRGDFRALN 331
Query: 283 INAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
N++T V+ IVP K EYL YR GG
Sbjct: 332 CNSWT----VNKRLPQIDSFDIVPTKFTEIAPEYLRNYRPGG 369
>gi|119194685|ref|XP_001247946.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor [Coccidioides immitis RS]
gi|392862814|gb|EAS36516.2| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
[Coccidioides immitis RS]
Length = 386
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 177/316 (56%), Gaps = 17/316 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 59 GHTATVFGATGFLGRYIVNRLARQGCTVIVPYRE-EMAKRHLKVTGDLGRVVFMEYDLRN 117
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N++ EDV+ ERIA ++ + R+I +S
Sbjct: 118 TQSIEESVRHSDVVYNLVGRDYPTKNFTLEDVHIEGTERIAESVAKY-DVDRYIHVSSYN 176
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +SPS F TKA E A P TI+RPA M G EDRLL+K A F +
Sbjct: 177 ADLNSPSEFFRTKAQGENAAREIFPETTIVRPAPMFGFEDRLLHKLAGITNIFTSNHM-- 234
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DVA A+ L ++ T+ + +EL GP ++ E++E++ I +
Sbjct: 235 --QERYWPVHAIDVAHALERMLLEEWTA-SQTFELYGPTNYSTAEISEIVDREIIKTRRR 291
Query: 247 VKVPFPVAKAVAMPREILLKK-VPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ VP KA+ P L + + +P + DE+ D + NA TF+DLGI
Sbjct: 292 INVP----KAMLKPAAYWLNRLIWWP-----TISADEVEREFLDQEIDPNAKTFKDLGIE 342
Query: 306 PHKLKGYPTEYLIWYR 321
P +L YL YR
Sbjct: 343 PAELSNLTFHYLRGYR 358
>gi|406861149|gb|EKD14204.1| NADH-ubiquinone oxidoreductase subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 384
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G TVFG TGFLGRY+V ++A+ G V++P+R E RHLK+ GDLG+++ M+++ R+
Sbjct: 57 GHTVTVFGATGFLGRYIVNRIARQGCTVIIPYRE-EMAKRHLKVAGDLGRVIFMEYDLRN 115
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+++ ++ ++VV NL+GR Y T+N+ EDV+ ERIA ++ + RFI +S
Sbjct: 116 TASLEESVRHSDVVYNLVGRMYPTKNFDLEDVHVEGVERIAEAVAKY-DVDRFIHVSSYN 174
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ +SPS FSTK E P TI+RPA + G EDRLL+K A +
Sbjct: 175 ANVNSPSEFFSTKGRGEAVARSIFPETTIVRPAPLFGFEDRLLHKLAGVTNVLTSNHM-- 232
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L DD T+ + YEL GP ++ E+AEL+ I ++ +
Sbjct: 233 --QERYWPVHAIDVGEALEKMLHDDSTAE-QTYELYGPKNYSTAEIAELVDKEIVKHRRH 289
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P KA+ P LL K L P + + DE+ D + +A TF+DLGI P
Sbjct: 290 INLP----KAILKPAAGLLNKA---LWWP-VISADEVEREFIDQTIDPSAKTFKDLGIEP 341
Query: 307 HKLKGYPTEYLIWYRKGG 324
+L YL YR
Sbjct: 342 AELSSLTFHYLQGYRSAA 359
>gi|326469426|gb|EGD93435.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Trichophyton
tonsurans CBS 112818]
Length = 412
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 175/317 (55%), Gaps = 15/317 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 85 GHTATVFGATGFLGRYIVNRLARQGCTVIVPYRE-EMTKRHLKVTGDLGRVVFMEYDLRN 143
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NLIGR Y T+N+S+ED++ ERI ++ + R++ +S
Sbjct: 144 TQSIEESVRHSDIVYNLIGRNYPTKNFSYEDIHVEGTERIVESVAKY-DVDRYVHVSSYN 202
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
AS SPS F TKA E P TI+RPA M G EDRLL++ A F +
Sbjct: 203 ASLDSPSEFFRTKAQGENVARSIFPETTIVRPAPMFGFEDRLLHRLAGVTNIFTSNHM-- 260
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L +D T+ + +EL GP ++ E++EL+ I + +
Sbjct: 261 --QERYWPVHAIDVGRALEIMLMEDWTT-AQTFELYGPKNYSTKEISELVDREIIKKRRH 317
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP KA+ P L ++ L P + + DE+ D + A TF+DLGI P
Sbjct: 318 INVP----KAIMKPAAYWLNRL---LWWP-ITSADEVEREFIDQQIDPTAKTFKDLGIEP 369
Query: 307 HKLKGYPTEYLIWYRKG 323
L YL+ YR
Sbjct: 370 TDLNTLTFHYLLGYRSS 386
>gi|326485233|gb|EGE09243.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Trichophyton equinum
CBS 127.97]
Length = 385
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 175/317 (55%), Gaps = 15/317 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 58 GHTATVFGATGFLGRYIVNRLARQGCTVIVPYRE-EMTKRHLKVTGDLGRVVFMEYDLRN 116
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NLIGR Y T+N+S+ED++ ERI ++ + R++ +S
Sbjct: 117 TQSIEESVRHSDIVYNLIGRNYPTKNFSYEDIHVEGTERIVESVAKY-DVDRYVHVSSYN 175
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
AS SPS F TKA E P TI+RPA M G EDRLL++ A F +
Sbjct: 176 ASLDSPSEFFRTKAQGENVARSIFPETTIVRPAPMFGFEDRLLHRLAGVTNIFTSNHM-- 233
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L +D T+ + +EL GP ++ E++EL+ I + +
Sbjct: 234 --QERYWPVHAIDVGRALEIMLVEDWTT-AQTFELYGPKNYSTKEISELVDREIIKKRRH 290
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP KA+ P L ++ L P + + DE+ D + A TF+DLGI P
Sbjct: 291 INVP----KAIMKPAAYWLNRL---LWWP-ITSADEVEREFIDQQIDPTAKTFKDLGIEP 342
Query: 307 HKLKGYPTEYLIWYRKG 323
L YL+ YR
Sbjct: 343 TDLNTLTFHYLLGYRSS 359
>gi|348555012|ref|XP_003463318.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Cavia porcellus]
Length = 377
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 149/233 (63%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV +L +MGSQV++P+R D HL+ MGDLGQ+ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNRLGQMGSQVILPYRCDTYDIMHLRPMGDLGQLTFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINL+GR++ETRN+ FEDV + + IA + E G+ + I +S L
Sbjct: 112 DKDSIRRAVQYSNVVINLVGRDWETRNFDFEDVFVKIPQAIAQASME-AGVEKLIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR +KA E+ V P ATI+RP+ + G EDR LN +A ++ F PL
Sbjct: 171 NADIKSTSRYLRSKAVGEKEVSDAFPEATIIRPSDIFGREDRFLNHFAN-IRWFIGVPLV 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDVA + A+KD + GK + GP+ + + +L + ++
Sbjct: 230 SLGLKTVKQPVYVVDVAKGIINAVKDPD-AKGKTFAFVGPNRYLLFDLMQYIF 281
>gi|303311063|ref|XP_003065543.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105205|gb|EER23398.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320039348|gb|EFW21282.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Coccidioides
posadasii str. Silveira]
Length = 386
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 177/316 (56%), Gaps = 17/316 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 59 GHTATVFGATGFLGRYIVNRLARQGCTVIVPYRE-EMAKRHLKVTGDLGRVVFMEYDLRN 117
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N++ EDV+ ERIA ++ + R+I +S
Sbjct: 118 TQSIEESVRHSDVVYNLVGRDYPTKNFTLEDVHVEGTERIAESVAKY-DVDRYIHVSSYN 176
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +SPS F TKA E A P TI+RPA M G EDRLL+K A F +
Sbjct: 177 ADLNSPSEFFRTKAQGENAAREIFPETTIVRPAPMFGFEDRLLHKLAGITNIFTSNHM-- 234
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DVA A+ L ++ T+ + +EL GP ++ E++E++ I +
Sbjct: 235 --QERYWPVHAIDVAHALERMLLEEWTA-SQTFELYGPTNYSTAEISEIVDREIIKTRRR 291
Query: 247 VKVPFPVAKAVAMPREILLKK-VPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ VP KA+ P L + + +P + DE+ D + NA TF+DLGI
Sbjct: 292 INVP----KAMLKPAAYWLNRLIWWP-----TISADEVEREFLDQEIDPNAKTFKDLGIE 342
Query: 306 PHKLKGYPTEYLIWYR 321
P +L YL YR
Sbjct: 343 PAELSNLTFHYLRGYR 358
>gi|395324680|gb|EJF57116.1| NADH dehydrogenase [Dichomitus squalens LYAD-421 SS1]
Length = 364
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 181/322 (56%), Gaps = 26/322 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG ATVFG T FLGRY+V +LAK+G+ V++P+R ED+ RHL++ GDLGQI ++++ R
Sbjct: 46 SGHTATVFGATSFLGRYLVAKLAKVGTHVVIPYRD-EDEKRHLRVTGDLGQITSLEWDLR 104
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ I+ + +++V NL+GREYET+N++++DV+ AE IA IA ++ G+ RF+ +S L
Sbjct: 105 RPDQIEECLRHSDIVYNLVGREYETKNFTYDDVHAKGAEAIASIAYQN-GVDRFVHVSHL 163
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS SPS + +KA EE V P ATI+RPA M G EDRLLN A +P++
Sbjct: 164 NASHDSPSAFYRSKAKGEELVKEAYPNATIVRPATMFGYEDRLLNNMA-------IWPIW 216
Query: 186 ---GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
T+++P +V+DVA A+ L ++ + L GP T L L+
Sbjct: 217 WKLNHMQTKVRPAHVLDVAQALANTLP--MAALPGTFSLPGPSTLTYEYLLTLVSTITYN 274
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDE-INAYTSDTIVSDNALTFQD 301
P V V K+VA+ L + V +P+ P DE + Y D V + F
Sbjct: 275 PPSRAPV---VPKSVALALSKLAQNVWWPMLSP-----DEVVRRYIDDVDVPGDWDVF-- 324
Query: 302 LGIVPHKLKGYPTEYLIWYRKG 323
G++P +++ + YL +R
Sbjct: 325 -GVIPDEIEEHAITYLRRFRSA 345
>gi|310795030|gb|EFQ30491.1| NAD dependent epimerase/dehydratase [Glomerella graminicola M1.001]
Length = 375
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 176/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG +GRY+V +LA+ G V++PFR E RHLK+ GDLG++V M+++ R+
Sbjct: 48 GHTATVFGATGQVGRYIVNRLARQGCTVVIPFRE-EMAKRHLKVAGDLGRVVFMEYDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR Y T+N+S EDV+ ERIA ++ + RFI +S
Sbjct: 107 TQSIEESVRHSDVVYNLVGRNYPTKNFSLEDVHVEGTERIAEAVAKY-DVDRFIHMSSYN 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ SPS + TKA E+ P TI+RPA + G ED LL K A + F
Sbjct: 166 ANLDSPSEFYRTKARGEQVARSIYPETTIVRPAPIFGFEDNLLLKLASVMNLFT----AN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ R +PV+ +DV A+ L DD T+ G+ YEL GP +++ E+A+ I + +
Sbjct: 222 NMQERFRPVHSIDVGQALELMLYDDSTA-GQTYELYGPKEYSMAEIAQFADREIFKKRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K VA +L K + +P + DE+ D + + A TF+DLGI P
Sbjct: 281 INVPKSILKPVA---GLLNKYLWWP-----TMSADEVEREFIDQEIDETAKTFKDLGIEP 332
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ + YL YR
Sbjct: 333 GDISKFTYHYLQGYRSAN 350
>gi|320587229|gb|EFW99709.1| NADH-ubiquinone oxidoreductase [Grosmannia clavigera kw1407]
Length = 383
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 181/321 (56%), Gaps = 19/321 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG +G LGRY+V +LA+ G V+VPFR E RHLK+ GDLG+++ M+++ R+
Sbjct: 54 GHTATVFGASGALGRYIVNRLARQGCTVVVPFRE-EMTKRHLKVSGDLGRVIFMEYDLRN 112
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR Y T+N++ EDV+ AERIA ++ + RFI +S
Sbjct: 113 TASIEESVRHSDVVYNLVGRNYPTKNFTLEDVHVEGAERIAEAVAKY-DVDRFIHVSSYN 171
Query: 127 A--SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
A + +SPS F TKA E AV P TI+RPA M G ED LL + A +N
Sbjct: 172 AAGAETSPSEFFRTKALGEAAVRDIFPETTIVRPAPMFGFEDSLLLRLAGV---YNLLTS 228
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
+ R PV+++DV A+ L DD T+ G+ YEL GP ++ E+AEL+ I +
Sbjct: 229 -NNMQERYWPVHIIDVGRALELMLFDDNTA-GQTYELFGPKNYSTAEIAELVDREIYKSR 286
Query: 245 HYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
++ VP KAV P LL ++ FP + + +++ D + + TF+DLG
Sbjct: 287 RHINVP----KAVLKPAATLLNRLLWFP-----VMSGEDVEREFIDQTIDETVKTFKDLG 337
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P ++ + YL +R
Sbjct: 338 IEPDEISDFTYHYLQGFRSSS 358
>gi|254692859|ref|NP_079634.2| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial precursor [Mus musculus]
gi|341941159|sp|Q9DC69.2|NDUA9_MOUSE RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial; AltName: Full=Complex I-39kD;
Short=CI-39kD; AltName: Full=NADH-ubiquinone
oxidoreductase 39 kDa subunit; Flags: Precursor
gi|37231685|gb|AAH58378.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 [Mus
musculus]
gi|148667428|gb|EDK99844.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 [Mus
musculus]
Length = 377
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/317 (39%), Positives = 180/317 (56%), Gaps = 12/317 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+LMGDLGQ+ ++++ R
Sbjct: 52 SGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDLGQLTFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGRE+ETRN+ FEDV + IA +KE G+ RFI +S L
Sbjct: 112 DKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKE-AGVERFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS S S+ +KA E+ V P A I+RP+ + G EDR LN +A + + F PL
Sbjct: 171 NASMKSSSKSLRSKAVGEKEVRSVFPEAIIIRPSDIFGREDRFLNHFANY-RWFLAVPLV 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G T QPVYV DV+ + A KD ++GK + GP+ + + L + ++
Sbjct: 230 SLGFKTVKQPVYVADVSKGIVNATKDP-DAVGKTFAFTGPNRYLLFHLVKYIFGMT---- 284
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
H +P+P+ V L PF P ++ I + SD + +D +DLG+
Sbjct: 285 HRTFIPYPLPLFVYSWIGKLFGLSPFE-PWTTKDKVERI--HISDVMPTDLP-GLEDLGV 340
Query: 305 VPHKLKGYPTEYLIWYR 321
P L+ E L +R
Sbjct: 341 QPTPLELKSIEVLRRHR 357
>gi|378732017|gb|EHY58476.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
[Exophiala dermatitidis NIH/UT8656]
Length = 384
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 178/320 (55%), Gaps = 19/320 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFNP 64
G TVFG GFLGRY+V +LA+ G+QV++PFR DD RHLK+ GDLG++ M+F+
Sbjct: 57 GHTVTVFGAYGFLGRYIVNRLARRGNQVVIPFR---DDMAKRHLKVSGDLGRVSFMEFDV 113
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
R+ +I+ ++ +++V NLIG+ Y T+NYS D N ERIA ++ + RFI +S
Sbjct: 114 RNTQSIEESVRHSDMVFNLIGKNYPTKNYSLWDANVESVERIAEACAKY-DVDRFIHVSS 172
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
A +SPS F KA E+ + P TI+RPA + G ED LL++ A+ N F +
Sbjct: 173 YNADPNSPSEFFRVKAQGEQVARQLFPETTIVRPAPVFGFEDNLLHRLARVT---NLFTV 229
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G R PV+ +DV A+ DD T+ G+ +EL GP +++ E+AE++ I +
Sbjct: 230 NG-MQERFWPVHAIDVGMALERIGYDD-TTAGETFELYGPTNYSLAEIAEIVDKEIIKER 287
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
++ +P + K V L K V +P + + D++ D ++ +A TF+DLGI
Sbjct: 288 RHINLPKGLLKPVL---HYLNKLVWWP-----VMSADQLEQECLDQVIDKSAKTFKDLGI 339
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P L+ YL YR
Sbjct: 340 EPADLRDLTYHYLQDYRSSS 359
>gi|13543186|gb|AAH05760.1| Ndufa9 protein, partial [Mus musculus]
Length = 348
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/317 (39%), Positives = 180/317 (56%), Gaps = 12/317 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+LMGDLGQ+ ++++ R
Sbjct: 23 SGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDLGQLTFLEWDAR 82
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGRE+ETRN+ FEDV + IA +KE G+ RFI +S L
Sbjct: 83 DKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKE-AGVERFIHVSHL 141
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS S S+ +KA E+ V P A I+RP+ + G EDR LN +A + + F PL
Sbjct: 142 NASMKSSSKSLRSKAVGEKEVRSVFPEAIIIRPSDIFGREDRFLNHFANY-RWFLAVPLV 200
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G T QPVYV DV+ + A KD ++GK + GP+ + + L + ++
Sbjct: 201 SLGFKTVKQPVYVADVSKGIVNATKDP-DAVGKTFAFTGPNRYLLFHLVKYIFGMT---- 255
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
H +P+P+ V L PF P ++ I + SD + +D +DLG+
Sbjct: 256 HRTFIPYPLPLFVYSWIGKLFGLSPFE-PWTTKDKVERI--HISDVMPTDLP-GLEDLGV 311
Query: 305 VPHKLKGYPTEYLIWYR 321
P L+ E L +R
Sbjct: 312 QPTPLELKSIEVLRRHR 328
>gi|296814772|ref|XP_002847723.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Arthroderma otae CBS
113480]
gi|238840748|gb|EEQ30410.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Arthroderma otae CBS
113480]
Length = 407
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 175/318 (55%), Gaps = 15/318 (4%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G ATVFG TGFLGRY+V +LA+ G V+VP+R E RHLK+ GDLG++V M+++ R
Sbjct: 79 TGHTATVFGATGFLGRYIVNRLARQGCTVIVPYRE-EMTKRHLKVTGDLGRVVFMEYDLR 137
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I+ ++ +++V NLIGR Y T+N+S+ED++ ERI ++ + R++ +S
Sbjct: 138 NTQSIEESVRHSDIVYNLIGRNYPTKNFSYEDIHVEGTERIVESVAKY-DVDRYVHVSSY 196
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS SPS F TKA E P TI+RPA M G EDRLL++ A F +
Sbjct: 197 NASLDSPSEFFRTKAQGENVARSIFPETTIVRPAPMFGFEDRLLHRLAGVTNIFTSNHM- 255
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
R PV+ +DV A+ L ++ T+ + +EL GP ++ E++EL+ I +
Sbjct: 256 ---QERYWPVHAIDVGRALELMLMEEWTT-AQTFELYGPKNYSTKEISELVDREIIKKRR 311
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+V +P + K A L K + +P+ + DE+ D + A TF+DLGI
Sbjct: 312 HVNIPKTIMKPAAY---WLNKLLWWPIT-----SADEVEREFIDQHIDPTAKTFKDLGIE 363
Query: 306 PHKLKGYPTEYLIWYRKG 323
P L YL+ YR
Sbjct: 364 PTDLSTLTFHYLLGYRSS 381
>gi|288856263|ref|NP_001165787.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
[Nasonia vitripennis]
Length = 407
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 180/313 (57%), Gaps = 14/313 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ TVFG +GF+GRYV +L K+G+Q+++P+RG LKL GDLGQ++ F+
Sbjct: 55 FNGIVCTVFGNSGFMGRYVCNRLGKIGTQLILPYRGDFYQVAPLKLCGDLGQVLFHPFDL 114
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD+ +I + +NVVINLIG ++ET+N++++D + A R+A I K++ G+ RFI +SC
Sbjct: 115 RDEESILKCIKYSNVVINLIGCDWETKNFTYDDCHVQGAARLARICKQN-GVERFIHVSC 173
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWA-QFV 176
L AS + S+ F +K E AV +E P ATI+RPA GTEDR L +A ++
Sbjct: 174 LNASPNPEPILLPEGSKFFKSKWEGESAVRQEFPDATIIRPADTYGTEDRFLAYYAHRWR 233
Query: 177 KKFNFFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
+ F P++ G T QPV+V DVAA + AA+KD S G+ Y+ G + + +L +
Sbjct: 234 QHFRGIPMYKKGEHTEKQPVWVGDVAAGIVAAIKDH-QSAGRTYQFVGTKRYKLSDLMDW 292
Query: 236 MYDTI-REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINA-YTSDTIVS 293
+ + RE Y + + ++ L + P G + + + +TSD IV
Sbjct: 293 FQEMLRRESTIYGYRRLDLDRMPLFKLKVTLTEFLSPAYPIGYLHWEGLEKEHTSDRIVK 352
Query: 294 DNALTFQDLGIVP 306
T +DLGI P
Sbjct: 353 -GVPTLEDLGITP 364
>gi|110677481|ref|YP_680488.1| NADH-ubiquinone oxidoreductase [Roseobacter denitrificans OCh 114]
gi|109453597|gb|ABG29802.1| NADH-ubiquinone oxidoreductase, putative [Roseobacter denitrificans
OCh 114]
Length = 327
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 170/316 (53%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ +K G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKAGWRVRVAVRR-PNEAMFVKPYGVVGQVEPVLCNVRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ M A+ V+N +G E +F+ V AERIA IA + G + R + IS +GA
Sbjct: 63 SVRHVMMGADAVVNCVGILAEDSKNTFDTVQAEGAERIARIAAQEG-VARMVHISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TKA E VL+ +P A I+RP+ + G ED+ N++A K P+ G
Sbjct: 122 AHSDSDYARTKALGEAGVLQHMPSAVILRPSIVFGPEDQFFNRFADMAKLGPVLPVVG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPVYV DVA A AL + T +YELGGPD+ + L ELM +TI + V
Sbjct: 181 ETRFQPVYVDDVAQAAEKALTE--TVAPGVYELGGPDVCSFRALMELMLETIHKRRLIVN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+PF A+ + + +++K L R G+ D++ D +V + F LGI P
Sbjct: 239 IPFFAARIMGFTFD-MIQKASLGLIRNGMITRDQVKNLARDNVVGEGQRGFDALGIEPVT 297
Query: 309 LKGYPTEYLIWYRKGG 324
+ EYL +R G
Sbjct: 298 MVSVLPEYLWRFRPSG 313
>gi|158255570|dbj|BAF83756.1| unnamed protein product [Homo sapiens]
Length = 377
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 149/233 (63%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FE V + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRVVQHSNVVINLIGRDWETKNFDFEGVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFAS-MHRFGPIPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 281
>gi|307180316|gb|EFN68349.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Camponotus floridanus]
Length = 403
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 169/313 (53%), Gaps = 16/313 (5%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ TVFG TGF+GRYV +L K+G+Q+++P++G LKL GDLGQ++ F+
Sbjct: 55 FNGIVCTVFGATGFVGRYVCNRLGKIGTQLILPYKGDMYKCLPLKLCGDLGQVLFHPFHL 114
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD+++I+ + +NVVINLIGRE+ETRN+++ +V+ A R+A + KE + FI +S
Sbjct: 115 RDEDSIRKCIKYSNVVINLIGREWETRNFTYHEVHVDGARRLARLCKE-ANVEHFIHVSA 173
Query: 125 LGASSSSP------SRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK- 177
L S SR TK E AV E P ATI+RP+ + G EDR L +A ++
Sbjct: 174 LNVDSDKTYVLKDGSRFLHTKLEGEHAVREEFPEATIIRPSNIWGQEDRFLRVYAGIMRH 233
Query: 178 KFNFFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
F P++ +G +T QPV V DVA +TA KD + GKIY+ GP + EL +
Sbjct: 234 HFRTIPIWENGEATEKQPVAVYDVAGGITAIAKDPKNTAGKIYQFVGPKRYKFSELLDWF 293
Query: 237 YDTIREYPH---YVKVPFPVAKAVAMPREI-LLKKVPFPLPRPGLFNLDEINAYTSDTIV 292
+ P Y ++ A + + L +PL G + + IV
Sbjct: 294 HRIRMHNPADYGYRRIDLKYAPLFKLKLTLNELFSTAYPL---GFVQWELLEREAISDIV 350
Query: 293 SDNALTFQDLGIV 305
S T +DLGI
Sbjct: 351 SKELPTLEDLGIT 363
>gi|114568667|ref|YP_755347.1| NAD-dependent epimerase/dehydratase [Maricaulis maris MCS10]
gi|114339129|gb|ABI64409.1| NAD-dependent epimerase/dehydratase [Maricaulis maris MCS10]
Length = 321
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/316 (37%), Positives = 172/316 (54%), Gaps = 7/316 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
I TVFG +GF+GR+VV+ LAK G +V V R + L++MG +GQ+ ++ N R
Sbjct: 6 IITVFGGSGFVGRHVVRALAKAGYRVRVATR-RPHLAQDLRVMGVVGQVQLVQANLRVAA 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + A+ V+NL+G E+ +F ++ IA A G I R +QIS +GAS
Sbjct: 65 SVERALDGASGVVNLVGVLNESGRQTFSRLHAVGTATIAQAAAGMG-IERMVQISAIGAS 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S SR TKA E AVL +P ATI+RP+ + GTED N++A + PLFG G
Sbjct: 124 ADSASRYARTKAEGEAAVLAAMPDATILRPSIVFGTEDSFFNRFAAMARFVPALPLFGGG 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPV+ DV AV AA + T G+ YELGGP ++T EL + D I +
Sbjct: 184 KTRFQPVFAGDVGKAVLAAFERSDTR-GQTYELGGPGVYTFEELMRFILDEIDRPRFLLP 242
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P+ + K +A E L+ +P P L D++ SD +V+D+A DLGI
Sbjct: 243 LPWAIGKVIATVSE-LVGALPL---MPVLITRDQLVQLQSDNVVADDAKGLADLGIAGET 298
Query: 309 LKGYPTEYLIWYRKGG 324
++ YL YR+ G
Sbjct: 299 VEAIVPGYLERYRRYG 314
>gi|330935009|ref|XP_003304795.1| hypothetical protein PTT_17471 [Pyrenophora teres f. teres 0-1]
gi|311318451|gb|EFQ87114.1| hypothetical protein PTT_17471 [Pyrenophora teres f. teres 0-1]
Length = 440
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 173/318 (54%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V++PFR E RHLK+ GDLG++V M+ + R+
Sbjct: 113 GYTATVFGATGFLGRYIVNRLARSGCTVIIPFRE-EMAKRHLKVAGDLGRVVFMEMDLRN 171
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NLIGR+Y T+N+ EDV+ ERIA ++ I RF+Q+S
Sbjct: 172 TASIEESVRHSDIVYNLIGRDYPTKNFDLEDVHVAGTERIADAVAKY-DIDRFVQVSSHS 230
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A S S + TKA E P TI+RPA M G EDR L++ A L
Sbjct: 231 AHPESESEFYRTKARGEIVARSIYPETTIVRPAPMFGFEDRFLHRLASPSNIITANNL-- 288
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R +PV+V+DV A+ L DD T+ + YEL GP +++ E+ EL+ +
Sbjct: 289 --QERSRPVHVIDVGMALERMLHDD-TTAAQTYELYGPTEYSMAEVRELVEKETMHPKRH 345
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P + K +A LL +P+ + DE+ D I+ NA TF+DL I P
Sbjct: 346 INIPKRILKPLAHYANKLLW---WPIT-----SADEVEREFIDQIIDKNAKTFKDLDIEP 397
Query: 307 HKLKGYPTEYLIWYRKGG 324
+LK +YL YR
Sbjct: 398 VELKALTFDYLKGYRSSS 415
>gi|289742341|gb|ADD19918.1| NADH-ubiquinone oxidoreductase NDUFA9/39kDa subunit [Glossina
morsitans morsitans]
Length = 412
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 152/247 (61%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG +GF+GRYV +L K G+Q+++P+RG E D LK+ GDLGQ++ ++
Sbjct: 57 FNGIVATVFGCSGFVGRYVCNKLGKSGTQMVLPYRGDESDVMRLKVCGDLGQVLFHFYDL 116
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD+ I+ +NVVINL+GREYET+N+ F+DV+ A RIA I +E G+ R I +S
Sbjct: 117 RDEKAIRTACKYSNVVINLVGREYETKNFKFKDVHIDGARRIARICREV-GVERLIHVSA 175
Query: 125 L-------GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L G S S+ +K E+AV E P ATI+RPA + G+EDR L +A +
Sbjct: 176 LNVDPEPEGHIISGGSKFLRSKRLGEQAVFEEFPKATIIRPADIYGSEDRFLRYYAHVWR 235
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++ PL+ G + QPVYV DVA + ++KD T+ GKIY+ GP + + EL +
Sbjct: 236 RQIRGTPLWFSGERTVKQPVYVSDVAQGIVNSIKDPDTA-GKIYQAVGPKRYKLSELVDW 294
Query: 236 MYDTIRE 242
+R+
Sbjct: 295 FNRLMRK 301
>gi|358385632|gb|EHK23228.1| hypothetical protein TRIVIDRAFT_86926 [Trichoderma virens Gv29-8]
Length = 376
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 176/315 (55%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V+VPFR E RHLK+ GDLG+++ ++++ R+
Sbjct: 49 GHTATVFGATGQLGRYIVNRLARQGCTVVVPFRE-EMTKRHLKVTGDLGRVIFVEYDLRN 107
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+A++ ++VV NL+GR+Y T+N++ EDV+ ERIA ++ + R+I +S
Sbjct: 108 TASIEASVRHSDVVYNLVGRDYPTKNFTLEDVHVEGTERIAEAVAKY-DVDRYIHVSSHN 166
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ +SPS F+TK E P ATI+RPA + G ED LL K A + F
Sbjct: 167 ANVNSPSEFFATKGRGELVARNIFPEATIVRPAPIFGFEDNLLLKLASVLNLFT----AN 222
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ + PV+ +DV AA+ L DD T+ GK +EL GP +++ E+A L+ I + +
Sbjct: 223 NMQEKFWPVHSIDVGAALEKMLYDDSTA-GKTFELYGPKQYSLAEVAALVDKEIYKKRRH 281
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K VA KV + + DE+ D ++ A TF DLGI P
Sbjct: 282 INVPKAILKPVA--------KVLNDVLWWHTISADEVEREFIDQVIDPEASTFSDLGIEP 333
Query: 307 HKLKGYPTEYLIWYR 321
+ + YL +R
Sbjct: 334 GDIANFTYHYLQGFR 348
>gi|390602980|gb|EIN12372.1| NAD(P)-binding protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 362
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 182/322 (56%), Gaps = 25/322 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG +ATVFG TGFLGRYVV +LAK+G+QV+VP+R ED+ R LK MGDLGQIVP++++ R
Sbjct: 48 SGHVATVFGCTGFLGRYVVAKLAKIGTQVIVPYRD-EDEIRVLKPMGDLGQIVPLEWDIR 106
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ I+ + ++ V NL+GR+Y T+N+S+ DV+ A IA +A ++ G+ RF+ +S L
Sbjct: 107 NIAQIEQCLRHSDTVYNLVGRDYPTKNFSYTDVHVTGASTIAKVAADN-GVSRFVHVSHL 165
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPS ++ KAA EEAV P ATI+RP+AM G ED+LLN V + +
Sbjct: 166 NADHDSPSELYRAKAAGEEAVTAAFPDATILRPSAMFGHEDKLLNS----VFNWPIWFKL 221
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
D T+++PV+V+DVA A A L G + L GP T L +L+
Sbjct: 222 NDMQTKVRPVHVLDVAQAA-ANLLSTPAHAGAL-NLPGPRTVTYEYLLDLVSTVTYR--- 276
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL---DEIN-AYTSDTIVSDNALTFQD 301
P +KA +P+ L K V + R ++ DEI Y D V + +
Sbjct: 277 ------PPSKAPHLPKS-LAKLVTGAVERAVWWSTTSPDEIERKYIDDKAVPGD---WDV 326
Query: 302 LGIVPHKLKGYPTEYLIWYRKG 323
+G+ P ++ + YL YR+
Sbjct: 327 VGVEPDDIEQFAVAYLRAYREA 348
>gi|344230956|gb|EGV62841.1| NADH dehydrogenase 1 alpha subcomplex 9 [Candida tenuis ATCC 10573]
gi|344230957|gb|EGV62842.1| hypothetical protein CANTEDRAFT_115754 [Candida tenuis ATCC 10573]
Length = 394
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 177/308 (57%), Gaps = 25/308 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G +ATVFG +GFLGRYV +LAK G+ V+VPFR E R LK+ GDLG + ++++PR
Sbjct: 58 TGYVATVFGASGFLGRYVTSKLAKHGTVVVVPFRN-EMKKRFLKVTGDLGVVNFVEWDPR 116
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I+ ++A +++V N +G +Y T+N+S DVN + ERIA KE G RFI +S
Sbjct: 117 NIKSIQESVAHSDIVFNCVGADYHTKNFSMADVNIGITERIAQAVKEAGN-PRFIHVSSY 175
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ +S S ++TK E+ V +P ATI+RP+ G ED LLN +K + P
Sbjct: 176 NANPNSKSVFYATKGVGEQIVRDLVPDATIVRPSPTYGREDNLLNYLGPKLKMWT--P-- 231
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ + PV+V+DVA A+ DD T +GK +EL GP+ ++ E+ E+++ +++
Sbjct: 232 NRNAKEVHPVHVLDVARALEKIGYDDST-VGKTFELYGPEKYSFREIREMIHGITQDFSQ 290
Query: 246 Y---------VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA 296
++P P+AK A ++ LP L N D++ + + ++ NA
Sbjct: 291 VGPFSYKFADYQIPLPLAKLAADIKQ---------LPYWRLTNSDQVQRHVINQVIDANA 341
Query: 297 LTFQDLGI 304
TF+DLGI
Sbjct: 342 STFKDLGI 349
>gi|406990515|gb|EKE10168.1| NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 9
[uncultured bacterium]
Length = 308
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 120/316 (37%), Positives = 173/316 (54%), Gaps = 16/316 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
T+FG +GF+GRY+V++ A G + V R LK +G++GQI P++ + +
Sbjct: 5 TIFGGSGFVGRYIVEKFAAKGHLIRVAVRN-PIAANFLKPLGEVGQITPIQASILSTKDV 63
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKE-HGGIMRFIQISCLGASS 129
+ MA +++VINL+G YE + +FE ++ A +A A E H I F+ +S LGA
Sbjct: 64 ENAMAGSDIVINLVGILYEKGSQTFEAIHVEGARCVAEKAAELH--IPVFLHMSALGAKK 121
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
+S SR STKA EE VL+ P AT+ RP+ + G ED LN++A+ + F PL G G
Sbjct: 122 NSRSRYASTKARGEEVVLKHFPEATVFRPSVIFGPEDAFLNRFAEMARFSPFLPLIGGGK 181
Query: 190 TRIQPVYVVDVAAA-VTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPVYV DVA + AA K + S GK YELGG +I+T +L + TI +
Sbjct: 182 TRFQPVYVGDVAECFLKAAFKKE--SRGKTYELGGTEIYTFKQLMAYLLKTIYRKRLLLP 239
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
VPF +A+ +A + LP P L D++ S+T VS AL +DLG+
Sbjct: 240 VPFSLARIMATFAQF--------LPTPPL-TPDQVELLKSNTTVSSKALIAKDLGVHVKA 290
Query: 309 LKGYPTEYLIWYRKGG 324
++ YL YR GG
Sbjct: 291 MEALAPFYLKRYRPGG 306
>gi|239608124|gb|EEQ85111.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Ajellomyces
dermatitidis ER-3]
Length = 462
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 120/315 (38%), Positives = 172/315 (54%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 135 GHTATVFGATGFLGRYIVNRLASQGCTVIVPYRE-EMAKRHLKVTGDLGRVVFMEYDLRN 193
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+EDV+ RIA ++ + RFI +S
Sbjct: 194 TESIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKY-DVDRFIHVSSYN 252
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A SSPS F TKA E P TI+RPA M G ED LL+K A F +
Sbjct: 253 ADVSSPSEFFRTKAHGERIARDIFPETTIVRPAPMFGFEDNLLHKLAGITNLFTSNHM-- 310
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L D S+ + YEL GP ++ E+AEL+ I + +
Sbjct: 311 --QERYWPVHAIDVGYALEKMLFTDA-SVAQTYELYGPKNYSTAEIAELVDREIIKKRRH 367
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K A L + +P + DE+ D + +ALTF+DLGI P
Sbjct: 368 LNVPKRIMKPAAYWANKL---IWWP-----TISADEVEMEFIDQKIDPSALTFKDLGIEP 419
Query: 307 HKLKGYPTEYLIWYR 321
++ YL YR
Sbjct: 420 AEISNLTFHYLRGYR 434
>gi|189091884|ref|XP_001929775.1| hypothetical protein [Podospora anserina S mat+]
gi|27803052|emb|CAD60755.1| unnamed protein product [Podospora anserina]
gi|188219295|emb|CAP49275.1| unnamed protein product [Podospora anserina S mat+]
Length = 377
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 175/314 (55%), Gaps = 15/314 (4%)
Query: 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
ATVFG TG LGRY+V +LA+ G V+VP+R E RHLK+ GDLG++V ++++ R+ +
Sbjct: 54 ATVFGATGQLGRYIVNRLARQGCTVVVPYRE-EMAKRHLKVTGDLGRVVFVEYDLRNTQS 112
Query: 70 IKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
I+ ++ ++VV NL+GR Y T+N+S+EDV+ AERIA ++ + RFI +S A
Sbjct: 113 IEESVRHSDVVYNLVGRNYPTKNFSYEDVHIEGAERIAEAVAKY-DVDRFIHVSSYNADP 171
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
+ S +STK AE V P TI+RPA M G ED LL K A V F +
Sbjct: 172 NHVSEFYSTKGRAEHVVRSIFPETTIVRPAPMFGFEDNLLLKLASVVNLFT----SNNMQ 227
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
+ PV+V+DV A+ L DD T+ + +EL GP + + E+A+L+ I + ++ V
Sbjct: 228 EKFWPVHVIDVGEALEKMLWDDNTA-AQTFELYGPKQYAMAEIAKLVDREIFKKRRHINV 286
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
P KA+ P ++ K + + + DEI D ++ + A TF+DL I P +
Sbjct: 287 P----KAILKPAAAIINKALW----WDIMSADEIEREFHDQVIDETAKTFKDLDIEPTDI 338
Query: 310 KGYPTEYLIWYRKG 323
+ YL +R
Sbjct: 339 SKWTYHYLQGFRSS 352
>gi|195378672|ref|XP_002048107.1| GJ11526 [Drosophila virilis]
gi|194155265|gb|EDW70449.1| GJ11526 [Drosophila virilis]
Length = 417
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 178/331 (53%), Gaps = 30/331 (9%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG TGF+GRYV +L K G+Q+++P+RG + D LK+ GDLGQ++ ++
Sbjct: 62 FNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDANRLKVCGDLGQVLFHFYHL 121
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D +I+ + +NVVINL+GR+YET+N+ F+DVN A R+A I ++ G+ RFI +S
Sbjct: 122 EDPRSIREAVKHSNVVINLVGRDYETKNFKFKDVNVNGAARLASICRD-AGVERFIHLSA 180
Query: 125 LGASS-------SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L A + S S+ +K E V P ATI+RPA + G+EDR L +A +
Sbjct: 181 LNAEANPKAHYISGGSQWLKSKYEGELMVRDAFPNATIIRPADIYGSEDRFLRYYAHIWR 240
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G + QPV+V DVA A+ A KD T+ G+IY+ GP + + EL +
Sbjct: 241 RQFRSMPLWHSGERTVKQPVFVSDVAQAIVNAAKDPDTA-GRIYQAVGPKRYQLSELVDW 299
Query: 236 MYDTIRE------YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSD 289
+ +R+ Y Y P K ++ P G +LD +
Sbjct: 300 FHRLMRKDQKRWGYQRYDMRWDPTFKLKVKLTNLICPGAPI-----GGLHLDRVEREAIT 354
Query: 290 TIVSDNALTFQDLGI--------VPHKLKGY 312
V T +DLG+ VP +L+ Y
Sbjct: 355 DKVLPGVPTLEDLGVHLTNMEDQVPWELRPY 385
>gi|327349309|gb|EGE78166.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 386
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 172/317 (54%), Gaps = 15/317 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 59 GHTATVFGATGFLGRYIVNRLASQGCTVIVPYRE-EMAKRHLKVTGDLGRVVFMEYDLRN 117
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+EDV+ RIA ++ + RFI +S
Sbjct: 118 TESIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKY-DVDRFIHVSSYN 176
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A SSPS F TKA E P TI+RPA M G ED LL+K A F +
Sbjct: 177 ADVSSPSEFFRTKAHGERIARDIFPETTIVRPAPMFGFEDNLLHKLAGITNLFTSNHM-- 234
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L D S+ + YEL GP ++ E+AEL+ I + +
Sbjct: 235 --QERYWPVHAIDVGYALEKMLFTDA-SVAQTYELYGPKNYSTAEIAELVDREIIKKRRH 291
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K A L + +P + DE+ D + +ALTF+DLGI P
Sbjct: 292 LNVPKRIMKPAAYWANKL---IWWP-----TISADEVEMEFIDQKIDPSALTFKDLGIEP 343
Query: 307 HKLKGYPTEYLIWYRKG 323
++ YL YR
Sbjct: 344 AEISNLTFHYLRGYRSS 360
>gi|149566548|ref|XP_001515711.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like, partial [Ornithorhynchus
anatinus]
Length = 360
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 151/250 (60%), Gaps = 6/250 (2%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQ++ M++N R
Sbjct: 35 SGVVATVFGATGFLGRYVVNHLGRMGSQVVIPYRCEPYDIMHLRPMGDLGQLLFMEWNAR 94
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D +I+ +A +NVVINLIGR++ET+N+ F+DV + + IA +AKE G+ +FI +S L
Sbjct: 95 DKESIRRALAHSNVVINLIGRDWETKNFDFDDVFVKIPQSIAQLAKE-AGVEKFIHVSHL 153
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S SR KA E+ V P A I++P+ + G EDR LN +A
Sbjct: 154 NADMKSSSRYLRNKAVGEKVVREAFPGAVILKPSDIFGREDRFLNYFANNRWFGGIXXXX 213
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
T + VVDV+ A+ A+KD T GK + + GP+ + + +L + ++ H
Sbjct: 214 XXXXTPNRFPQVVDVSKAIVNAIKDPSTQ-GKTFVIAGPNRYQLFDLVQYVFAVA----H 268
Query: 246 YVKVPFPVAK 255
V +P+P+ +
Sbjct: 269 RVFLPYPMPR 278
>gi|302408289|ref|XP_003001979.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Verticillium
albo-atrum VaMs.102]
gi|261358900|gb|EEY21328.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Verticillium
albo-atrum VaMs.102]
Length = 375
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 176/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V+VPFR E RHLK+ GDLG+IV ++++ R+
Sbjct: 48 GHTATVFGATGQLGRYIVNRLARQGCTVVVPFRE-EMAKRHLKVTGDLGRIVFVEYDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV +L+GR Y T+N+S EDV+ +RI ++ + R+I +S
Sbjct: 107 TESIEQSVRHSDVVYDLVGRNYPTKNFSLEDVHIEGTKRIVDAVAKY-DVDRYIHVSSHS 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ SPS + TKA E+ P TI+RPA + G ED LL K A +
Sbjct: 166 ANLDSPSEFYRTKAQGEQIARSIYPETTIVRPAPLFGFEDNLLLKLASVLNLLT----AN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ R PV+ +DV A+ L DD T+ G+ +EL GP + + E+AE++ I ++ +
Sbjct: 222 NMRERFAPVHSIDVGHALELMLYDDNTA-GQTFELHGPKTYAMSEIAEMVDREIFKHRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K +A +L K + +P + DEI D + D A TF+DLGI P
Sbjct: 281 INVPKSLLKPIAG---LLNKALWWP-----TLSADEIEREFIDQEIDDTAKTFKDLGIEP 332
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ + YL +R G
Sbjct: 333 GDISKFTYHYLQGFRSGN 350
>gi|441670681|ref|XP_003273859.2| PREDICTED: probable polypeptide N-acetylgalactosaminyltransferase 8
[Nomascus leucogenys]
Length = 722
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 149/233 (63%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ TVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVTTVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRVVEHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S S+ KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSKYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPTPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP+ + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPNRYLLFHLVKYIF 281
>gi|149245847|ref|XP_001527396.1| hypothetical protein LELG_02225 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449790|gb|EDK44046.1| hypothetical protein LELG_02225 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 417
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 184/342 (53%), Gaps = 39/342 (11%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFN 63
+G TVFG +GFLGRY+V +LA+ G+ +VP+R DD R LK+ GDLG + ++ +
Sbjct: 82 TGYTVTVFGASGFLGRYLVSKLARHGTTTIVPYR---DDMKKRFLKVAGDLGVVNFVEID 138
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R+ +I+ ++A ++VVIN IG +Y+T+N+S DVN +AERIA ++ G+ RF+ +S
Sbjct: 139 ARNLQSIEDSVAHSDVVINCIGVDYDTKNFSMADVNIALAERIARATRD-AGVPRFVHVS 197
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A S S ++TK E+ V +P ATI+RPA M G ED LLN +K + P
Sbjct: 198 SYNADPKSDSVFYATKGIGEQRVKEIIPSATIVRPAQMFGREDNLLNYLGPNIKMWT--P 255
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
I PVYV+DVA A+ DD T+MGK YEL GP+ + HE+ +++ +
Sbjct: 256 --NKNQKEIYPVYVLDVARALEKITYDD-TTMGKTYELYGPEKLSYHEIRTMIHGITENF 312
Query: 244 PHY---------VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
+P P+AKA+A ++++ K+P P D++ + + +
Sbjct: 313 AMAGPFTYNFADYNLPLPIAKAIAQLQQLVWWKLPNP---------DQMQRHVINQKIDS 363
Query: 295 NALTFQDLGIVPHKLKGYPTEYLIWY----------RKGGPK 326
A TF+ LG+ + + + L Y +KGGP
Sbjct: 364 TAETFESLGLGAQQDRTKLADVLFSYVKQWRHPLIAQKGGPN 405
>gi|163745259|ref|ZP_02152619.1| NADH-ubiquinone oxidoreductase, putative [Oceanibulbus indolifex
HEL-45]
gi|161382077|gb|EDQ06486.1| NADH-ubiquinone oxidoreductase, putative [Oceanibulbus indolifex
HEL-45]
Length = 328
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 171/316 (54%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ ++A+ G +V V R ++ ++ G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIAYRMARAGWRVRVAVR-HPNEALFVRTYGVVGQVEPVLCNIRDDG 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + A+ V+N +G ET F+ V AERIA +A G + RF+Q+S +GA
Sbjct: 63 SVRDALRGADAVVNCVGILVETGKNGFDAVQSGGAERIARMAAGEG-VDRFVQVSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TK E AVL+ +P A I+RP+ M G ED N++A + P+ G
Sbjct: 122 MESDSDYARTKGEGEAAVLKHMPHAVILRPSIMFGAEDEFFNRFAGMTRTGPILPVAG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPV+V DVA A AL +G + +YELGGPD+ T L + M I +
Sbjct: 181 ATRFQPVFVDDVAKAAETAL--EGRAASGVYELGGPDVDTFRGLMQRMLHVIHRRRLVLN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P+ VAK VA + +L+ + F L + D++ +D +V+D A F +LGI P
Sbjct: 239 MPWFVAKMVAFGFD-MLQAITFGLFTNKMLTRDQVKNLRNDNVVADGARGFTELGITPTA 297
Query: 309 LKGYPTEYLIWYRKGG 324
+ +YL +R G
Sbjct: 298 MDAVLPDYLWRFRPSG 313
>gi|297261596|ref|XP_001118102.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Macaca mulatta]
Length = 460
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 154/249 (61%), Gaps = 8/249 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L ++GSQV++P R D HL+ MGDLGQ++ ++++ R
Sbjct: 95 SGIVATVFGATGFLGRYVVNHLGRIGSQVIIPHRCDIYDTMHLRPMGDLGQLLFLEWDAR 154
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ F+DV + + IA ++KE G+ +FI +S L
Sbjct: 155 DKDSIRRAVEHSNVVINLIGRDWETKNFDFDDVYVKIPQAIAQVSKE-AGVEKFIHVSHL 213
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+AV P A I++P+ + G EDR LN +A +++F PL
Sbjct: 214 NANIKSSSRYLRNKAVGEKAVRDAFPEAIIIKPSDIFGREDRFLNSFAH-LRQFVLTPLG 272
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
T + QPVYVVDV+ + +KD S GK + G + TV + ++
Sbjct: 273 SLSWTTVKQPVYVVDVSKGIVNIVKDPDAS-GKTFAFVGXNRHTVFHTVKYIF----AXA 327
Query: 245 HYVKVPFPV 253
H + +P P+
Sbjct: 328 HRLFLPLPL 336
>gi|347756860|ref|YP_004864422.1| NAD dependent epimerase/dehydratase family protein [Micavibrio
aeruginosavorus ARL-13]
gi|347589378|gb|AEP08420.1| NAD dependent epimerase/dehydratase family protein [Micavibrio
aeruginosavorus ARL-13]
Length = 323
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 174/320 (54%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
IATVFG +GF+GRYVVQ LA+ G V V R E L+ G +GQIVPM N RD
Sbjct: 7 IATVFGGSGFVGRYVVQALARAGYTVKVASRAAES-AYFLRPYGTVGQIVPMTCNVRDRA 65
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ +A ++VV+N IG YE + F+ ++ + + IA + + RF+ IS LGA
Sbjct: 66 SVERVIAGSSVVVNCIGILYERKRGDFKRLHTDLPQMIAELCTAQN-VSRFVHISALGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ PSR TK A E+AVL P ATI+RP+ + G ED N++A PL G G
Sbjct: 125 RN-PSRYSRTKLAGEQAVLAAFPNATILRPSVIFGPEDDFFNRFATMAGFMPALPLIGGG 183
Query: 189 STRIQPVYV----VDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
TR QPVYV V AA T + ++G+++ELGGP+I ++ ++ I +
Sbjct: 184 MTRFQPVYVRDVADAVVAAATHSAFGHSGALGQVFELGGPEILNFRDIYSRLFSYIGKRC 243
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
V +PF VA A +L+ +P P+P + D++ + +D +V D+A+T DLG+
Sbjct: 244 GMVNLPFGVAALQAG----VLQFIP---PKP-ILTPDQVKSLKTDNVVQDDAMTLDDLGV 295
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
+ YL +R GG
Sbjct: 296 TATGMSLIVPAYLERFRPGG 315
>gi|380476735|emb|CCF44549.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Colletotrichum
higginsianum]
Length = 375
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 175/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG +GRY+V +LA+ G V++PFR E RHLK+ GDLG++V ++++ R+
Sbjct: 48 GHTATVFGATGQVGRYIVNRLARQGCTVIIPFRE-EMAKRHLKVAGDLGRVVFIEYDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR Y T+N+S EDV+ ERIA ++ + RFI +S
Sbjct: 107 TQSIEESVRHSDVVYNLVGRNYPTKNFSLEDVHVEGTERIAEAVAKY-DVDRFIHMSSYN 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ S S + TKA E+ P TI+RPA + G ED LL K A + F
Sbjct: 166 ANLESASEFYRTKARGEQVARSIYPETTIVRPAPVFGFEDNLLLKLASVMNLFT----AN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ R +PV+ +DV A+ L DD T+ G+ YEL GP +++ E+A+ I + +
Sbjct: 222 NMQERFRPVHSIDVGQALELMLYDDSTA-GQTYELYGPQEYSMAEIAQFADREIFKKRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K VA +L K + +P + DEI D + + A TF+DLGI P
Sbjct: 281 INVPKSILKPVAG---LLNKYLWWP-----TMSADEIEREFIDQEIDETAKTFKDLGIEP 332
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ + YL YR
Sbjct: 333 GDISKFTYHYLQGYRSAN 350
>gi|261203687|ref|XP_002629057.1| NADH:ubiquinone oxidoreductase 40kD subunit [Ajellomyces
dermatitidis SLH14081]
gi|239586842|gb|EEQ69485.1| NADH:ubiquinone oxidoreductase 40kD subunit [Ajellomyces
dermatitidis SLH14081]
Length = 386
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 172/317 (54%), Gaps = 15/317 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 59 GHTATVFGATGFLGRYIVNRLASQGCTVIVPYRE-EMAKRHLKVTGDLGRVVFMEYDLRN 117
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+EDV+ RIA ++ + RFI +S
Sbjct: 118 TVSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKY-DVDRFIHVSSYN 176
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A SSPS F TKA E P TI+RPA M G ED LL+K A F +
Sbjct: 177 ADVSSPSEFFRTKAHGERIARDIFPETTIVRPAPMFGFEDNLLHKLAGITNLFTSNHM-- 234
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L D S+ + YEL GP ++ E+AEL+ I + +
Sbjct: 235 --QERYWPVHAIDVGYALEKMLFTDA-SVAQTYELYGPKNYSTAEIAELVDREIIKKRRH 291
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K A L + +P + DE+ D + +ALTF+DLGI P
Sbjct: 292 LNVPKRIMKPAAYWANKL---IWWP-----TISADEVEMEFIDQKIDPSALTFKDLGIEP 343
Query: 307 HKLKGYPTEYLIWYRKG 323
++ YL YR
Sbjct: 344 AEISNLTFHYLRGYRSS 360
>gi|12833615|dbj|BAB22596.1| unnamed protein product [Mus musculus]
Length = 377
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 179/317 (56%), Gaps = 12/317 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+LMGD GQ+ ++++ R
Sbjct: 52 SGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDPGQLTFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGRE+ETRN+ FEDV + IA +KE G+ RFI +S L
Sbjct: 112 DKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKE-AGVERFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS S S+ +KA E+ V P A I+RP+ + G EDR LN +A + + F PL
Sbjct: 171 NASMKSSSKSLRSKAVGEKEVRSVFPEAIIIRPSDIFGREDRFLNHFANY-RWFLAVPLV 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G T QPVYV DV+ + A KD ++GK + GP+ + + L + ++
Sbjct: 230 SLGFKTVKQPVYVADVSKGIVNATKDP-DAVGKTFAFTGPNRYLLFHLVKYIFGMT---- 284
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
H +P+P+ V L PF P ++ I + SD + +D +DLG+
Sbjct: 285 HRTFIPYPLPLFVYSWIGKLFGLSPFE-PWTTKDKVERI--HISDVMPTDLP-GLEDLGV 340
Query: 305 VPHKLKGYPTEYLIWYR 321
P L+ E L +R
Sbjct: 341 QPTPLELKSIEVLRRHR 357
>gi|195348289|ref|XP_002040681.1| GM22299 [Drosophila sechellia]
gi|195495852|ref|XP_002095444.1| GE19689 [Drosophila yakuba]
gi|194122191|gb|EDW44234.1| GM22299 [Drosophila sechellia]
gi|194181545|gb|EDW95156.1| GE19689 [Drosophila yakuba]
Length = 416
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 152/247 (61%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG TGF+GRYV +L K GSQ+++P+RG + D LK+ GDLGQ++ +N
Sbjct: 61 FNGIVATVFGATGFVGRYVCNKLGKSGSQMILPYRGDDSDVIRLKVTGDLGQVLFHFYNL 120
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D +I+ + +NVVINL+GR++ET+N+ F+DV+ AERIA IA+E G+ RFI +S
Sbjct: 121 EDPASIREAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIARE-AGVERFIHLSS 179
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L ++ S +K E V P ATI+RPA + G+EDR L +A +
Sbjct: 180 LNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWR 239
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G + QPVYV DVA A+ A KD S G++Y+ GP + + EL +
Sbjct: 240 RQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDP-DSAGRVYQAVGPKRYQLSELVDW 298
Query: 236 MYDTIRE 242
+ +R+
Sbjct: 299 FHRLMRK 305
>gi|312380419|gb|EFR26417.1| hypothetical protein AND_07551 [Anopheles darlingi]
Length = 421
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 153/247 (61%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG+TGFLGRYV +L K+GSQV++P+R + LKL+GDLGQ++ ++
Sbjct: 75 FNGIVATVFGSTGFLGRYVCNKLGKIGSQVIIPYRADHYEALRLKLVGDLGQVLFHPYDL 134
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD++ I+ + +NVVINL+GR++ET+N+SF+DV+ A R+A IA+E G+ +F+ +S
Sbjct: 135 RDEDAIRKAVKYSNVVINLVGRDWETKNFSFKDVHVEGARRLARIARE-AGVEKFVHVSS 193
Query: 125 LGAS-------SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L A+ + S+ +K E AV E P A + RPA + G EDR L +A +
Sbjct: 194 LNATPTPQPFFTKEGSKFLQSKYYGELAVREEFPDAIVFRPADIYGQEDRFLRYYAHIWR 253
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G I QPVY D+A + A+K D S G+ Y+ GP + + L +
Sbjct: 254 RQFRAMPLWYKGERTIKQPVYCSDLAQGIINAIK-DSDSQGQTYQAVGPRRYKLSVLVDW 312
Query: 236 MYDTIRE 242
+ +R+
Sbjct: 313 FHQIMRK 319
>gi|449303966|gb|EMC99973.1| hypothetical protein BAUCODRAFT_30399 [Baudoinia compniacensis UAMH
10762]
Length = 392
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 176/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G TVFG TGFLGRY+V ++A+ G V+VPFR E RHLK+ GDLG++V ++++ R+
Sbjct: 65 GHTVTVFGATGFLGRYIVNRMARAGCTVVVPFRE-EMKKRHLKVSGDLGRVVFLEYDLRN 123
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NL+GR+Y T+N+ EDV+ RIA ++ + RFIQ+S
Sbjct: 124 TASIEESVRHSDIVYNLVGRDYPTKNFDLEDVHVEGTRRIADAVAKY-DVDRFIQVSSHS 182
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A SPS + TK +E P TI+RPA M G EDRLL++ A +
Sbjct: 183 AHPDSPSEFYRTKYWSERVARDIFPETTIVRPAPMFGFEDRLLHRLANARNILS----CN 238
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ R+ PV+V+DV AA+ + DD T+ G+ +EL GP +T+ EL +L+ I + +
Sbjct: 239 NMEERLWPVHVIDVGAALESIGMDDSTA-GQTFELYGPKEYTMMELKQLVDREILKERRH 297
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P KAV P L K + + + DE+ D + NA TF+DL + P
Sbjct: 298 INLP----KAVMAPLYGFLNKALW----WHVGSRDEVEREYLDQFIDKNAKTFKDLDMEP 349
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ + +YL YR
Sbjct: 350 GDVSNFTFKYLQGYRSSS 367
>gi|346976860|gb|EGY20312.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Verticillium dahliae
VdLs.17]
Length = 375
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 176/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V+VPFR E RHLK+ GDLG+IV ++++ R+
Sbjct: 48 GHTATVFGATGQLGRYIVNRLARQGCTVVVPFRE-EMAKRHLKVTGDLGRIVFVEYDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV +L+GR Y T+N+S EDV+ +RI ++ + R+I +S
Sbjct: 107 TESIEQSVRHSDVVYDLVGRNYPTKNFSLEDVHIEGTKRIVDAVAKY-DVDRYIHVSSHS 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ SPS + TKA E+ P TI+RPA + G ED LL K A +
Sbjct: 166 ANLDSPSEFYRTKAQGEQIARSIYPETTIVRPAPLFGFEDNLLLKLASVLNLLT----AN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ R PV+ +DV A+ L DD T+ G+ +EL GP + + E+AE++ I ++ +
Sbjct: 222 NMRERFAPVHSIDVGHALELMLYDDNTA-GQTFELHGPKTYAMSEIAEMVDREIFKHRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K +A +L K + +P + DEI D + + A TF+DLGI P
Sbjct: 281 INVPKSLLKPIAG---LLNKALWWP-----TLSADEIEREFIDQEIDETAKTFKDLGIEP 332
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ + YL +R G
Sbjct: 333 GDISKFTYHYLQGFRSGN 350
>gi|260431917|ref|ZP_05785888.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415745|gb|EEX09004.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Silicibacter
lacuscaerulensis ITI-1157]
Length = 327
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 170/317 (53%), Gaps = 8/317 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRYV +++A G +V V R ++ +K G +GQ+ P+ N RDD
Sbjct: 4 LVTIFGGSGFVGRYVARRMANEGWRVRVAVR-RPNEAIFVKTYGVVGQVEPILCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ M A+ V+N +G + FE V AERIA +A + G I R + IS +GA
Sbjct: 63 SVANAMRGADAVVNCVGVLNDLGKNGFEAVQAEGAERIARLAAQQG-IKRMVHISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S +KA E VL +P A I+RP+ + G ED+ N++A + F P+FG
Sbjct: 122 PESDSEYARSKAQGEAGVLAHMPNAVILRPSVIFGPEDQFFNRFAAMTRMSPFLPIFG-A 180
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
TR QPVYV DVA AAV L G + IYELGGP++ T EL + M + I +
Sbjct: 181 DTRFQPVYVDDVAQAAVKGVL---GQAEPGIYELGGPEVKTFRELMQQMLEVIHRRRIII 237
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+PF V + +A +I +K V F L + D++ D +VS+ A F DLGI P
Sbjct: 238 GLPFWVGRIMAGVLDI-VKFVSFQLFPNNILTRDQLKNLRRDNVVSEGAKGFADLGIEPT 296
Query: 308 KLKGYPTEYLIWYRKGG 324
L+ EYL +R G
Sbjct: 297 TLESVLPEYLWKFRPSG 313
>gi|195480057|ref|XP_002086632.1| GE23238 [Drosophila yakuba]
gi|194186422|gb|EDX00034.1| GE23238 [Drosophila yakuba]
Length = 416
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 152/247 (61%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG TGF+GRYV +L K GSQ+++P+RG + D LK+ GDLGQ++ +N
Sbjct: 61 FNGIVATVFGATGFVGRYVCNKLGKSGSQMILPYRGDDSDVIRLKVTGDLGQVLFHFYNL 120
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D +I+ + +NVVINL+GR++ET+N+ F+DV+ AERIA IA+E G+ RFI +S
Sbjct: 121 EDPASIREAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIARE-AGVERFIHLSS 179
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L ++ S +K E V P ATI+RPA + G+EDR L +A +
Sbjct: 180 LNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWR 239
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G + QPVYV DVA A+ A KD S G++Y+ GP + + EL +
Sbjct: 240 RQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDP-DSAGRVYQAVGPKRYQLSELVDW 298
Query: 236 MYDTIRE 242
+ +R+
Sbjct: 299 FHRLMRK 305
>gi|401883097|gb|EJT47332.1| NADH dehydrogenase (ubiquinone) [Trichosporon asahii var. asahii
CBS 2479]
gi|406700246|gb|EKD03421.1| NADH dehydrogenase (ubiquinone) [Trichosporon asahii var. asahii
CBS 8904]
Length = 411
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 178/344 (51%), Gaps = 34/344 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG TVFG TGFLGRY+V +LAK G+QV+VP+R ED RHLK+ GDLG +VP++++ R
Sbjct: 56 SGHTVTVFGCTGFLGRYIVSKLAKEGTQVIVPYRD-EDKKRHLKVTGDLGVVVPLEWDAR 114
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ + I + ++ V NL G ++E+RN+S+EDVN A IA + + + + I +S L
Sbjct: 115 NPDQIHECVRHSDTVYNLTGLDWESRNFSYEDVNVKTAGLIAEVCAQ-SNVDQLIHVSHL 173
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ +S SR + TK E AV P ATI+RP M G ED LN AQ+ F
Sbjct: 174 NANPNSSSRFYRTKYDGERAVRNAFPDATIVRPGPMFGAEDWFLNAAAQYPALFK----L 229
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM-YDTIREYP 244
G+T+ PV+V+DVA A+ L TS+ + L GP I T +E+ +L+ T++
Sbjct: 230 NGGNTKFMPVHVLDVAKALKVMLDAPVTSVASTFHLAGPAIKTGNEILDLVSLLTMKPMN 289
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN-------------AYTSDTI 291
V+VP VA A A +++ K + +P P IN AY
Sbjct: 290 KAVEVPKSVALAFA---KLVNKAIWWPTVSPDEIERKYINDAGIEALEPLDTSAYPDGWA 346
Query: 292 VSDNAL-----------TFQDLGIVPHKLKGYPTEYLIWYRKGG 324
S + TF DL I P ++ + Y+ YR
Sbjct: 347 PSQQSSIIPGVDGEPVKTFADLAISPDHIEEWAIRYVRRYRSSA 390
>gi|225560883|gb|EEH09164.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus G186AR]
Length = 386
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 173/315 (54%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 59 GHTATVFGATGFLGRYIVNRLASQGCTVIVPYRE-EMAKRHLKVTGDLGRVVFMEYDLRN 117
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+EDV+ RIA ++ + RFI +S
Sbjct: 118 TQSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKY-DVDRFIHVSSYN 176
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +SPS F TKA E+ P TI+RPA M G ED LL+K A F +
Sbjct: 177 ADMNSPSEFFRTKAQGEKLARMLFPETTIVRPAPMFGFEDNLLHKLAGITNLFTSNHM-- 234
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L D +S+G+ YEL GP ++ E+AEL+ I + +
Sbjct: 235 --RERYWPVHAIDVGHALEKMLFTD-SSVGQTYELYGPKNYSTAEIAELVDREIIKRRRH 291
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K A LL +P + DE+ D + +A TF+DL I P
Sbjct: 292 LNVPKRIMKPAAQWANKLLW---WP-----TISADEVEMEFIDQKIDQSAKTFKDLDIEP 343
Query: 307 HKLKGYPTEYLIWYR 321
++ YL YR
Sbjct: 344 AEIANLTFYYLRGYR 358
>gi|453081096|gb|EMF09146.1| NAD(P)-binding protein [Mycosphaerella populorum SO2202]
Length = 384
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 175/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G+ V+VPFR E RHLK+ GDLG++V ++++ R+
Sbjct: 57 GHTATVFGATGFLGRYIVNRLARAGNTVVVPFRE-EMAKRHLKVTGDLGRVVFIEYDLRN 115
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I + +++VINL+GR+Y T+N+ DV+ RIA ++ + RFI +S
Sbjct: 116 KASIDEAVRHSDIVINLVGRDYPTKNFDLADVHEEGTRRIANAVAKY-DVDRFIHVSSHS 174
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
+ SPS + TK E+ P TI+RPA G EDRLL++ A+ F
Sbjct: 175 VAPDSPSEFYRTKWNGEQIAREIFPETTIVRPAPAFGFEDRLLHRLARATNVFT----AN 230
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ R +P++ +D +A+ +DD T+ G+ YEL GP +T+ E++EL+ + + +
Sbjct: 231 NMQERFRPIHSIDFGSALEVMCQDDNTA-GQTYELFGPKEYTLKEISELVDREMIKKRRH 289
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P KAV P L KV L P + DE+ D ++ A TF+DL I P
Sbjct: 290 INLP----KAVLKPLFGTLNKV---LWWP-TGSTDEVEREFLDQVIDKKAKTFKDLDIEP 341
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ + +YL YR
Sbjct: 342 GDIANFTYQYLQSYRSSS 359
>gi|339505399|ref|YP_004692819.1| NAD dependent epimerase / dehydratase-like protein [Roseobacter
litoralis Och 149]
gi|338759392|gb|AEI95856.1| NAD dependent epimerase / dehydratase-like protein [Roseobacter
litoralis Och 149]
Length = 327
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 167/316 (52%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ +K G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFIGRYITRRMAKAGWRVRVAVRR-PNEAMFVKPYGVVGQVEPVLCNVRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ M A+ V+N +G E +F+ V AERIA IA E G I + + IS +GA
Sbjct: 63 SVRDVMMGADAVVNCVGILAEDSKNTFDTVQAEGAERIARIAAEEG-IAKMVHISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TKA E VL+ +P A I+RP+ + G ED+ N++A K P+
Sbjct: 122 AHSDSDYARTKALGEAGVLQHIPAAVILRPSIVFGAEDQFFNRFADMTKLGPVLPVV-SA 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPVYV DVA A AL + T +YELGGPD+ + L ELM +TI V
Sbjct: 181 DTRFQPVYVDDVAQAAEKALTE--TVAPGVYELGGPDVCSFRALMELMLETIHRRRLIVN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+PF A+ + + +++ L + G+ D++ D +V + F LGI P
Sbjct: 239 IPFFAARIMGFTFD-MIQTASLGLIKNGMITRDQVKNLARDNVVCEGQRGFDALGIEPAT 297
Query: 309 LKGYPTEYLIWYRKGG 324
+ EYL +R G
Sbjct: 298 MVSVLPEYLWRFRPSG 313
>gi|170059692|ref|XP_001865472.1| NADH-ubiquinone oxidoreductase 39 kda subunit [Culex
quinquefasciatus]
gi|167878361|gb|EDS41744.1| NADH-ubiquinone oxidoreductase 39 kda subunit [Culex
quinquefasciatus]
Length = 401
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 152/247 (61%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++G++ATVFG TGFLGRYV +L K+GSQV++P+R + LKL GDLGQ++ ++
Sbjct: 55 FNGVVATVFGATGFLGRYVCNKLGKIGSQVIIPYRADHYEAMRLKLCGDLGQVLFHPYHL 114
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D+ +I + +NVVINL+GR++ET+N++F+DV+ A R+A IAK+ G+ +FI IS
Sbjct: 115 CDEESIYKAVKYSNVVINLVGRDWETKNFAFQDVHVEGARRLARIAKQ-AGVEKFIHISS 173
Query: 125 LGAS-------SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L A+ + S+ +K A E+AV E P A + RP+ + G EDR L +A +
Sbjct: 174 LNATPHPEPILTKEGSKFLKSKYAGEKAVREEFPDAIVFRPSDIYGQEDRFLRYYAHIWR 233
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G I QPVY DVA + A+K D S G+ Y+ GP + + EL +
Sbjct: 234 RQFRGMPLWYSGERTIKQPVYCGDVAQGIVNAIK-DSDSQGQTYQAVGPRRYKLSELVDW 292
Query: 236 MYDTIRE 242
+ +R+
Sbjct: 293 FHREMRK 299
>gi|358394267|gb|EHK43660.1| hypothetical protein TRIATDRAFT_300143 [Trichoderma atroviride IMI
206040]
Length = 376
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 172/315 (54%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V+VPFR E RHLKL GDLG+++ ++ + R+
Sbjct: 49 GHTATVFGATGQLGRYIVNRLARQGCTVVVPFRE-EMTKRHLKLTGDLGRVIFVEHDLRN 107
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+A++ ++VV NLIGR+Y T+N++ EDV+ ERIA ++ + R+I +S
Sbjct: 108 TASIEASVRHSDVVYNLIGRDYPTKNFTLEDVHVEGTERIAEAVAKY-DVDRYIHVSSHN 166
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +SPS F+TK E P TI+RPA + G ED LL K A + F
Sbjct: 167 ADVNSPSEFFATKGRGELVARSIFPETTIVRPAPVFGFEDNLLLKLASVLNLFT----AN 222
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ + PV+ +DV AA+ L DD T+ GK +EL GP +++ E+A L+ I + +
Sbjct: 223 NMQEKFWPVHSIDVGAALEKMLYDDSTA-GKTFELYGPKQYSLAEIAALVDKEIFKKRRH 281
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K VA KV + DE+ D ++ A TF DLGI P
Sbjct: 282 INVPKAILKPVA--------KVLNDALWWHTISADEVEREFIDQVIDPEASTFSDLGIEP 333
Query: 307 HKLKGYPTEYLIWYR 321
+ + YL +R
Sbjct: 334 GDIANFTYHYLQGFR 348
>gi|322790205|gb|EFZ15204.1| hypothetical protein SINV_03405 [Solenopsis invicta]
Length = 410
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 169/324 (52%), Gaps = 39/324 (12%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ T+FG+TGF+GRY+ +L K+G+Q+++P+RG + LKL GDLGQ++ F+
Sbjct: 61 FNGIVCTLFGSTGFVGRYLCNRLGKIGTQLVLPYRGDMYNCLPLKLCGDLGQVLFHPFHL 120
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RDD +I+ + +NVVINLIGR++ETRN++F +VN A RIA + KE I FI +S
Sbjct: 121 RDDESIRKCIKYSNVVINLIGRDWETRNFTFHEVNVEGARRIARLCKE-ANIEHFIHVSA 179
Query: 125 LGASSSSPSRVFS-------TKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK 177
L S + TK E AV E P ATI+RP+ + G EDR L + ++
Sbjct: 180 LNVGDELESHILKDGSQYLRTKWEGECAVREEFPEATIIRPSDIWGQEDRFLRLYCGIMR 239
Query: 178 -KFNFFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
F P++ G T QPV V DVA +TA KD + GK Y+ GP+ + + EL +
Sbjct: 240 HHFRTVPMWEKGEKTEKQPVAVYDVAKGITAIAKDPKHTAGKTYQFVGPNRYKLSELIDW 299
Query: 236 MYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPF---------------PLPRPGLFNL 280
H +++ PV R LK P PL G +
Sbjct: 300 F--------HRIRIRDPVEDGY---RRFDLKYAPLFKLKVSLNELISTAHPL---GYLSW 345
Query: 281 DEINAYTSDTIVSDNALTFQDLGI 304
+ + T +S+ T +DLGI
Sbjct: 346 EHLERETISDKISNELPTLEDLGI 369
>gi|325089168|gb|EGC42478.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus H88]
Length = 782
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 173/315 (54%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 59 GHTATVFGATGFLGRYIVNRLASQGCTVIVPYRE-EMAKRHLKVTGDLGRVVFMEYDLRN 117
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+EDV+ RIA ++ + RFI +S
Sbjct: 118 TQSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKY-DVDRFIHVSSYN 176
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +SPS F TKA E+ P TI+RPA M G ED LL+K A F +
Sbjct: 177 ADMNSPSEFFRTKAQGEKLARMLFPETTIVRPAPMFGFEDNLLHKLAGITNLFTSNHM-- 234
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L D +S+G+ YEL GP ++ E+AEL+ I + +
Sbjct: 235 --RERYWPVHAIDVGHALEKMLFTD-SSVGQTYELYGPKNYSTAEIAELVDREIIKRRRH 291
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K A LL +P + DE+ D + +A TF+DL I P
Sbjct: 292 LNVPKRIMKPAAHWANKLLW---WP-----TISADEVEMEFIDQKIDQSAKTFKDLDIEP 343
Query: 307 HKLKGYPTEYLIWYR 321
++ YL YR
Sbjct: 344 AEIANLTFYYLRGYR 358
>gi|154277898|ref|XP_001539781.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor [Ajellomyces capsulatus NAm1]
gi|150413366|gb|EDN08749.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor [Ajellomyces capsulatus NAm1]
Length = 345
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 173/317 (54%), Gaps = 15/317 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 18 GHTATVFGATGFLGRYIVNRLASQGCTVIVPYRE-EMAKRHLKVTGDLGRVVFMEYDLRN 76
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+EDV+ RIA ++ + RFI +S
Sbjct: 77 TQSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKY-DVDRFIHVSSYN 135
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +SPS F TKA E+ P TI+RPA M G ED LL+K A F +
Sbjct: 136 ADMNSPSEFFRTKAQGEKLARMLFPETTIVRPAPMFGFEDNLLHKLAGITNLFTSNHM-- 193
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L D +S+G+ YEL GP ++ E+AEL+ I + +
Sbjct: 194 --RERYWPVHAIDVGHALEKMLFTD-SSVGQTYELYGPKNYSTAEIAELVDREIIKRRRH 250
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K A LL +P + DE+ D + +A TF+DL I P
Sbjct: 251 LNVPKRIMKPAAHWANKLLW---WP-----TISADEVEMEFIDQKIDQSAKTFKDLDIEP 302
Query: 307 HKLKGYPTEYLIWYRKG 323
++ YL YR
Sbjct: 303 AEIANLTFYYLRGYRSS 319
>gi|126132938|ref|XP_001382994.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9
[Scheffersomyces stipitis CBS 6054]
gi|126094819|gb|ABN64965.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9
[Scheffersomyces stipitis CBS 6054]
Length = 386
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 174/310 (56%), Gaps = 29/310 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFN 63
+G ATVFG TGFLGRY+ +LA+ G+ +VPFR DD R LK+ GDLG + ++F+
Sbjct: 52 TGYTATVFGATGFLGRYLTSKLARHGTTTIVPFR---DDMKKRFLKVTGDLGVVNFVEFD 108
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R+ +I ++A +++V N IG +YET+N+S DVN + ERIA KE G+ RF+ +S
Sbjct: 109 ARNVKSIADSVAHSDIVFNCIGADYETKNFSMADVNISITERIAQATKE-AGVPRFVHVS 167
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A+ S S ++TK E+ V +P ATI+RP+ M G ED LLN +K + P
Sbjct: 168 SYNANPKSESIFYATKGIGEQVVRDIIPSATIVRPSPMYGREDNLLNYLGPKLKMWT--P 225
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
G S I P YV+DVA A+ DD T+ G+ YEL G + + E+ ++++ +++
Sbjct: 226 --GKNSKEIYPTYVLDVARALEKIGYDDSTA-GQTYELYGSEKLSFLEIRQMIHGITQDF 282
Query: 244 PHY---------VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
+ +P P+AK VA ++ LP L N D++ + + ++
Sbjct: 283 SNAGPLSYNFADYNLPLPIAKLVAQLKQ---------LPYWKLTNPDQVQRHVINQVIDP 333
Query: 295 NALTFQDLGI 304
A TF+DLGI
Sbjct: 334 TAKTFKDLGI 343
>gi|194874988|ref|XP_001973503.1| GG16121 [Drosophila erecta]
gi|190655286|gb|EDV52529.1| GG16121 [Drosophila erecta]
Length = 416
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 152/247 (61%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG TGF+GRYV +L K G+Q+++P+RG + D LK+ GDLGQ++ +N
Sbjct: 61 FNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDLGQVLFHFYNL 120
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D +I+ + +NVVINL+GR++ET+N+ F+DV+ AERIA IA+E G+ RFI +S
Sbjct: 121 EDPASIREAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIARE-AGVERFIHLSS 179
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L ++ S +K E V P ATI+RPA + G+EDR L +A +
Sbjct: 180 LNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHVWR 239
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G + QPVYV DVA A+ A KD S G++Y+ GP + + EL +
Sbjct: 240 RQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDP-DSAGRVYQAVGPKRYQLSELVDW 298
Query: 236 MYDTIRE 242
+ +R+
Sbjct: 299 FHRLMRK 305
>gi|83944942|ref|ZP_00957308.1| NADH-ubiquinone oxidoreductase 39 kDa subunit precursor, putative
[Oceanicaulis sp. HTCC2633]
gi|83851724|gb|EAP89579.1| NADH-ubiquinone oxidoreductase 39 kDa subunit precursor, putative
[Oceanicaulis sp. HTCC2633]
Length = 329
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 166/320 (51%), Gaps = 15/320 (4%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR---HLKLMGDLGQIVPMKFNPRDD 67
TVFG +GF+GRYVV++LAK G +V R P LK MG +GQ+ M+ N R++
Sbjct: 9 TVFGASGFIGRYVVRELAKAGYRV----RAATRRPHLAHELKPMGVVGQVQLMQANLRNE 64
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
++++ + A+ V+NL+G E+ +F+ + A +A A E GI F+QIS +GA
Sbjct: 65 DSVRRAVDGAHAVVNLVGILSESGKQNFQSLQADGAGLVAKCAAE-AGITNFVQISAIGA 123
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
S S TKAA E+AV +P A ++RP+ + G ED NK+ + PL G
Sbjct: 124 DEDSKSEYARTKAAGEKAVREHIPSAVVLRPSIVFGMEDGFFNKFGSMARFVPALPLIGG 183
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G TR QP++ DVA V A+ G+ +ELGGP ++ EL E + TIR V
Sbjct: 184 GQTRFQPIFAGDVAECVLKAVDAPTKYAGRTFELGGPSTYSFKELMEFILTTIRRKRLLV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIV--SDNAL-TFQDLGI 304
VPF A + M EI L +PF P D++ SD +V +D L D GI
Sbjct: 244 PVPFFAAYPLGMVGEI-LGALPFVQP---FLTRDQVTLLKSDNVVGETDEDLGATADFGI 299
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
++ YL YRKGG
Sbjct: 300 DLETVEAITPTYLARYRKGG 319
>gi|353235792|emb|CCA67799.1| probable NADH2 dehydrogenase (ubiquinone) 40K chain [Piriformospora
indica DSM 11827]
Length = 365
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 182/328 (55%), Gaps = 36/328 (10%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G +ATVFG TGFLGRY+V +LAK G+QV+VP+R E+ RHL+ MGDLGQIVP++ + R
Sbjct: 41 TGHVATVFGCTGFLGRYLVAKLAKNGTQVIVPYRD-ENTKRHLRPMGDLGQIVPLELDIR 99
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ I+ + +++V NLIGR+YET+N+ F VN A IA I+ E G+ R + +S +
Sbjct: 100 NPQQIEEAVRHSDIVYNLIGRDYETKNFDFASVNKMGAADIARISAE-SGVPRLVHVSHI 158
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL- 184
A++ SPS+ + TK E+AV P A I RP+ M G ED+ LN A ++P+
Sbjct: 159 NAAADSPSKFYRTKKEGEDAVREAFPSAIIARPSQMYGPEDKFLNSMA-------YWPML 211
Query: 185 --FGDGSTRIQPVYVVDVA---AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM--- 236
F G T+ +PVYV DVA A +++ + DG+++ L GP F+ EL +L+
Sbjct: 212 WKFNKGKTQTRPVYVQDVAQGLANLSSLPELDGSTLS----LPGPVTFSYTELEQLISLF 267
Query: 237 -YDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295
++ + P V K++A+ + + V +P P IN D SD
Sbjct: 268 TFNPVSNMPE-------VPKSIALLLSRISQLVWWPTLSPDEIERRFIN--VPDRAPSD- 317
Query: 296 ALTFQDLGIVPHKLKGYPTEYLIWYRKG 323
+ +G+ P +++ L YR G
Sbjct: 318 ---WDKVGVQPVEIEEVAISILRRYRSG 342
>gi|197103633|ref|YP_002129010.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Phenylobacterium
zucineum HLK1]
gi|196477053|gb|ACG76581.1| NADH-ubiquinone oxidoreductase 39 kDa subunit precursor
[Phenylobacterium zucineum HLK1]
Length = 325
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 170/319 (53%), Gaps = 15/319 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR---HLKLMGDLGQIVPMKFNPR 65
+ TVFG +GF+G VV+QLAK G ++ V R +P ++L GD+GQI ++ N R
Sbjct: 4 LVTVFGGSGFVGTQVVRQLAKAGWRIRVAVR----NPSLGYAMRLHGDVGQIDVVQANIR 59
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D +++ + A +NL+G YE F+ V+ A +A +A G + R +Q+S L
Sbjct: 60 DRDSVARALEGATASVNLVGVLYEAGRQGFQAVHVDGARTVAEVAAAEG-VTRVVQMSAL 118
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA++ S S+ TKA E AV + P A ++RP+ + G ED NK+A + PL
Sbjct: 119 GAAADSASKYARTKAEGEAAVRQVRPDAVVVRPSIVFGPEDGFFNKFASMAQVSPVLPLI 178
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G+TR QPV+V DV A+ A + D + G+ YELGG +FT EL +LM +
Sbjct: 179 GGGTTRFQPVFVGDVGKAI-ARMVTDSAAAGQTYELGGQAVFTFRELMQLMLAETGQRRL 237
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ VPF VA + +++ +P P+ D++ SD +VS + +LGI
Sbjct: 238 LLPVPFGVAGMLGALGDVMAMVLPPPV------TSDQVTLLRSDNVVSGSLPGLPELGIT 291
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P L+ YL YR+GG
Sbjct: 292 PTTLEAVLPTYLYRYRRGG 310
>gi|167530378|ref|XP_001748148.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773268|gb|EDQ86909.1| predicted protein [Monosiga brevicollis MX1]
Length = 377
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 176/350 (50%), Gaps = 43/350 (12%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG+TGFLGRYVV +L GSQV++P+RG E D RHL++ GDLGQ + F
Sbjct: 26 SGIVATVFGSTGFLGRYVVNRLGGTGSQVVLPYRGDEHDWRHLRVTGDLGQTHFLPFQLL 85
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D +++ M ++VVINLIG+ ++R+++ DV H RI G A G+ I +S +
Sbjct: 86 DRASVEKAMKYSDVVINLIGQSCDSRHFALSDV-HVEGARIIGEAAAASGVETLIHVSSM 144
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF--P 183
A + S + TKA EEAV P A I+RP+ +IG EDR LN++A++ + F P
Sbjct: 145 NADADSECDFYKTKALGEEAVRSAFPDAIIVRPSDVIGFEDRFLNRFAEW-RSFPLTGQP 203
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGG-------------------- 223
LF G +PV+ +DVA + AA + G+ E G
Sbjct: 204 LFDGGKATKRPVFSLDVADGIIAAASNAKYIKGQTLEFFGYAFFFVHFPGSSVKLSRSTD 263
Query: 224 -----------PDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPL 272
P +TV EL + TIR + VP V +AV + L PL
Sbjct: 264 FNLGMIDLRVSPREYTVKELVTFVNQTIRLPNNPTNVPVAVGRAVGRAFDRL------PL 317
Query: 273 PRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRK 322
P + D + TSD + S N +T +D GI ++ +L +RK
Sbjct: 318 D-PIISEQDVLRLSTSDKL-SKNVITLEDFGIEGTTMERVALNWLRRFRK 365
>gi|75674365|ref|YP_316786.1| NAD-dependent epimerase/dehydratase [Nitrobacter winogradskyi
Nb-255]
gi|74419235|gb|ABA03434.1| NAD-dependent epimerase/dehydratase [Nitrobacter winogradskyi
Nb-255]
Length = 353
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 171/323 (52%), Gaps = 16/323 (4%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
S + TVFG +GFLGRYVV+ LAK ++ V R E HL+ +G +GQI ++ N R
Sbjct: 36 SDTLVTVFGGSGFLGRYVVRALAKRDYRIRVGVRRPELAG-HLQPLGKVGQIHAVQVNLR 94
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+++A M + V +NL+G ++ +F+ V R + +S +
Sbjct: 95 HPASVRAAMRGSEVAVNLVGILTKSGRQTFDAV--VAKGAATVAETAAAAGARLVHVSAI 152
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA +S S KA+ E+AVL +P ATI+RP+ M G ED+ N++A PL
Sbjct: 153 GADPASASAYARAKASGEKAVLAAVPSATILRPSVMFGPEDQFANRFAALALISPMLPLI 212
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G+TR+QPV+V DVA AV A+ D T G +YELGGPD+ ++ E+ ++ I
Sbjct: 213 GGGATRMQPVHVGDVATAVADAV-DGRTKAGAVYELGGPDVLSMREIMRIILRVIERERM 271
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQD 301
V VPF +A+ +AM L+ P PL D++ +D +VS+ A LT Q
Sbjct: 272 LVPVPFLMARLMAMG----LQFAPGPLK----LTPDQVALLRTDNVVSNTATAAGLTLQG 323
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
LGI P ++ +YL +RK G
Sbjct: 324 LGIAPDSMEAVVPQYLWRFRKAG 346
>gi|340518819|gb|EGR49059.1| predicted protein [Trichoderma reesei QM6a]
Length = 376
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 175/315 (55%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V+VPFR E RHLKL GDLG+++ ++++ R+
Sbjct: 49 GHTATVFGATGQLGRYIVNRLARQGCTVVVPFRE-EMTKRHLKLTGDLGRVIFIEYDLRN 107
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+A++ ++VV NL+GR+Y T+N++ EDV+ ERIA ++ + R+I +S
Sbjct: 108 TASIEASVRHSDVVYNLVGRDYPTKNFTLEDVHVEGTERIAEAVAKY-DVDRYIHVSSHN 166
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ +S S F+TK E P TI+RPA + G ED LL K A + F
Sbjct: 167 ANPNSTSEFFATKGRGELVARSIFPETTIVRPAPVFGFEDNLLLKLASVLNLFT----AN 222
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ + PV+ +DV AA+ L DD T+ GK +EL GP +++ E+A L+ I + +
Sbjct: 223 NMQQKFWPVHSIDVGAALEKMLYDDSTA-GKTFELYGPKQYSLAEVAALVDKEIFKKRRH 281
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP KA+ P LL K + + DE+ D ++ A TF DLG+ P
Sbjct: 282 INVP----KAILKPVAGLLNKYLW----WHTLSADEVEREFIDQVIDPEASTFADLGVEP 333
Query: 307 HKLKGYPTEYLIWYR 321
+ + YL +R
Sbjct: 334 GDIANFTYHYLQGFR 348
>gi|99082660|ref|YP_614814.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ruegeria sp. TM1040]
gi|99038940|gb|ABF65552.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ruegeria sp. TM1040]
Length = 329
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 168/316 (53%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ H+K G GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMHVKPYGVPGQVEPVFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A MA A+ V+N +G E +F V A RIA IA + G + R + +S +GA
Sbjct: 63 SVAAVMAGADAVVNCVGVLNEVGKNTFSAVQSEGAGRIARIAADTG-VERLVHVSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S TKA E AVL P A I+RP+ + G ED+ N++A + P+ G G
Sbjct: 122 ADGDSAYARTKAEGEAAVLEAFPSAMILRPSIIFGPEDQFFNRFASMTRFGPVLPIAG-G 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPVYV DVA A A L G + YELGGP++ + EL M D I V
Sbjct: 181 TTRFQPVYVDDVAKAAVAGLT--GQAAAGTYELGGPEVKSFTELMSQMLDVIHRRRLVVS 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P VA+ +A + + + V F L GL D++ +D +VS+ A DLGI P
Sbjct: 239 LPNFVARLMAFGFD-MAQAVTFGLFTNGLLTRDQLKNLQNDNVVSEGAKGLADLGIEPVT 297
Query: 309 LKGYPTEYLIWYRKGG 324
+ +YL +R G
Sbjct: 298 MGSVLPDYLWKFRPSG 313
>gi|90420734|ref|ZP_01228640.1| NADH-ubiquinone oxidoreductase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335025|gb|EAS48786.1| NADH-ubiquinone oxidoreductase [Aurantimonas manganoxydans
SI85-9A1]
Length = 369
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 172/317 (54%), Gaps = 17/317 (5%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
VFG +GF+GRY+VQ LA+ G ++ V R D HL+ G++GQI+P++ N R +++
Sbjct: 46 VFGGSGFVGRYLVQALARRGHRIRVACR-RPDLAYHLQPNGNMGQIMPIQANLRYPWSVE 104
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+ A+ V+NL+G ++ SF+ + F A +A + G M QIS +GA +S
Sbjct: 105 RAVEGADHVVNLVGILAQSGQQSFDALQSFGARTVAEATAKIGAGM--TQISAIGADENS 162
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S TKA E+AVL +P A IMRP+ + G ED+ N++A + F PL G G TR
Sbjct: 163 GSEYARTKAEGEKAVLDAIPGAYIMRPSIVFGAEDQFFNRFADMARFSPFLPLIGGGKTR 222
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
QPVYV DVA A+ + D G++YELGGP++ T ++ E M I +V +PF
Sbjct: 223 FQPVYVGDVAEAIADTV-DGKVPGGRVYELGGPEVLTFRQMMEEMLRIIERKRSFVTIPF 281
Query: 252 PVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLGIVPH 307
A ++A L++ +P P D++ +D +VS +A+ T + GI P
Sbjct: 282 GAAASMAK----LMRFLPGAPLTP-----DQVTQLQTDNVVSQDAIEDGRTLEAFGIRPR 332
Query: 308 KLKGYPTEYLIWYRKGG 324
+ YL+ +RK G
Sbjct: 333 TVDAILPTYLVRFRKHG 349
>gi|259417212|ref|ZP_05741131.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Silicibacter sp.
TrichCH4B]
gi|259346118|gb|EEW57932.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Silicibacter sp.
TrichCH4B]
Length = 329
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 170/316 (53%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ H+K G GQ+ P+ N RDD+
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMHVKPYGVPGQVEPVFCNIRDDS 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A MA ++ V+N +G E +F V A RIA IA + G + R + +S +GA
Sbjct: 63 SVAAVMAGSDAVVNCVGVLNEIGKNTFSAVQSEGAGRIARIAADTG-VERLVHVSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S TKAA E AVL P A I+RP+ + G ED+ N++A + P+ G G
Sbjct: 122 AEGASEYARTKAAGEAAVLEAFPGAMILRPSIIFGAEDQFFNRFAGMTRFGPILPIAG-G 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPVYV DVA A A L G++ YELGGP++ + +L M + I V
Sbjct: 181 ATRFQPVYVDDVAKAAVAGLT--GSAAPGTYELGGPEVKSFADLMAQMLNVIHRRRIVVS 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P VA+ +A + L + F L GL D++ SD +V++ A DLGI P
Sbjct: 239 LPNFVARIMAFGFD-LAQSATFGLFTNGLLTRDQLKNLNSDNVVAEGAKGLADLGIEPVT 297
Query: 309 LKGYPTEYLIWYRKGG 324
L +YL +R G
Sbjct: 298 LGSVLPDYLWKFRPSG 313
>gi|452977911|gb|EME77675.1| hypothetical protein MYCFIDRAFT_145481 [Pseudocercospora fijiensis
CIRAD86]
Length = 383
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 176/318 (55%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G TVFG TGFLGRY+V ++A+ G+ V++PFR E RHLK+ GDLG++V ++++ R+
Sbjct: 56 GHTVTVFGATGFLGRYIVNRMARAGNTVVIPFRE-EMAKRHLKVTGDLGRVVMIEYDLRN 114
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NL+GR+Y T+N+ EDV+ RIA ++ + RFI +S
Sbjct: 115 TGSIEESVRHSDIVFNLVGRDYPTKNFDLEDVHVEGTHRIASAVAKY-DVDRFIHLSSHS 173
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
SPS F TK E+ P TI+RPA + G EDRLL++ A+ L
Sbjct: 174 VHPESPSEFFRTKWRGEQVAREIFPETTIVRPAPIFGFEDRLLHRLARATNVLTANNL-- 231
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ A DD T+ G+ +EL GP +++ E++EL+ + + +
Sbjct: 232 --QERFWPVHSIDVGKALEAIAMDDSTA-GQTFELYGPKEYSMKEISELVDREMIKKRRH 288
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P KAV P +L KV L P + + DE+ D + NA TF+DL I P
Sbjct: 289 INLP----KAVLRPLFGVLNKV---LWWP-VGSADEVEREYLDQFIDKNAKTFKDLDIEP 340
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ + +YL YR
Sbjct: 341 GDVANFTYKYLQHYRSSS 358
>gi|429849743|gb|ELA25090.1| nadh-ubiquinone oxidoreductase 39 kda [Colletotrichum
gloeosporioides Nara gc5]
Length = 618
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 174/318 (54%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG +GRY+V +LA+ G V++PFR E RHLK+ GDLG++V ++++ +
Sbjct: 48 GHTATVFGATGQVGRYIVNRLARQGCTVVIPFRE-EMAKRHLKVSGDLGRVVFIEYDLHN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR Y T+N+S EDV+ ERIA ++ + R+I +S
Sbjct: 107 TQSIEESVRHSDVVYNLVGRNYPTKNFSLEDVHVEGTERIAEAVAKY-DVDRYIHMSSHS 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
AS SPS + TKA E+ P TI+RPA + G ED LL K A + F
Sbjct: 166 ASLDSPSEFYRTKARGEQVARSIYPETTIVRPAPIFGFEDNLLLKLASVMNLFT----AN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ R PV+ +DV A+ L DD T+ G+ +EL GP +++ E+AE + I + +
Sbjct: 222 NMQERFWPVHSIDVGQALELMLYDDSTA-GQTFELYGPKNYSMAEIAEYVDREIFKKRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP K V P LL K + + + DEI D + + A TF+DLGI P
Sbjct: 281 INVP----KKVLQPVAGLLNKFLW----WDVMSADEIEREFIDQEIDETAKTFKDLGIEP 332
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ + YL +R G
Sbjct: 333 GDIAKFTYHYLQGFRSGN 350
>gi|449549106|gb|EMD40072.1| hypothetical protein CERSUDRAFT_112285 [Ceriporiopsis subvermispora
B]
Length = 368
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 175/321 (54%), Gaps = 24/321 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G +ATVFG TGFLGRY+V +LAKMG+QV++P+R ED RHLK+ GDLGQIV M+++ R
Sbjct: 47 TGNVATVFGCTGFLGRYLVSKLAKMGTQVIIPYRE-EDAKRHLKVTGDLGQIVSMEWDLR 105
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ I+ + +++V NL+GR+YET+N+ + V+ A RIA +A G+ RF+ +S L
Sbjct: 106 SEDQIEECVRHSDIVYNLVGRDYETKNFDHDAVHAEGAARIAEVAAR-AGVPRFVHVSHL 164
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS SS S+ + TKA EE V P ATI+RP + G ED+ LN A +P++
Sbjct: 165 NASESSLSKFYRTKARGEEYVRGAFPNATIVRPGPLYGYEDKFLNNMA-------VWPIW 217
Query: 186 ---GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
+T ++PV+V DVA A+ A D S+ + L GP TV L ++
Sbjct: 218 WKLNHAATTVRPVHVFDVAQAL--ANLQDVASLPGTFNLPGPSTLTVDYLLRMVSSVTYR 275
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
P V + K VA+ + V +P P IN +D +
Sbjct: 276 PPSRAPV---LPKPVALQLARAAQAVWWPALSPDEVERRFIND-------ADLPSDWDKF 325
Query: 303 GIVPHKLKGYPTEYLIWYRKG 323
GIVP +++ + YL YR
Sbjct: 326 GIVPDEIEEHAITYLRRYRSA 346
>gi|322707954|gb|EFY99531.1| NADH-ubiquinone oxidoreductase 40 kDa subunit-like protein
[Metarhizium anisopliae ARSEF 23]
Length = 375
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 176/315 (55%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V+VPFR E RHLK+ GDLG++V ++++ R+
Sbjct: 48 GHTATVFGATGQLGRYIVNRLARQGCTVVVPFRE-EMTKRHLKVTGDLGRVVFVEYDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+A++ ++VV NLIGR+Y T+N+S DV+ ERI ++ + R+I +S
Sbjct: 107 TPSIEASVRHSDVVYNLIGRDYPTKNFSLNDVHVEGTERIVEAVAKY-DVDRYIHVSSHS 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A S S +STKA E+ P AT++RPA M G ED LL K A + F
Sbjct: 166 ADLQSASEFYSTKARGEQVARSIFPEATLVRPAPMFGFEDNLLLKLASVLNLFT----AN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ + PV+ +DV AA+ L DD T+ G+ +EL GP +++ ++A ++ I + +
Sbjct: 222 NMQEKFWPVHSIDVGAALEKMLYDDSTT-GQTFELYGPREYSMRQIATMVDKEIYKQRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K +A +L K + + + DE+ D ++ A TF+DLGI P
Sbjct: 281 INVPKRILKPIA---GVLNKALWW-----HTMSADEVEREFMDQVIDPTAKTFKDLGIEP 332
Query: 307 HKLKGYPTEYLIWYR 321
+ + YL +R
Sbjct: 333 GDIANFTYHYLQGFR 347
>gi|367032388|ref|XP_003665477.1| hypothetical protein MYCTH_2309275 [Myceliophthora thermophila ATCC
42464]
gi|347012748|gb|AEO60232.1| hypothetical protein MYCTH_2309275 [Myceliophthora thermophila ATCC
42464]
Length = 377
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 172/314 (54%), Gaps = 15/314 (4%)
Query: 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
ATVFG TG LGRY+V +LA+ G V+VP+R E RHLKL GDLG++V M+++ R+ +
Sbjct: 53 ATVFGATGQLGRYIVNRLARQGCTVVVPYRE-EMAKRHLKLTGDLGRVVFMEYDLRNTQS 111
Query: 70 IKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
I+ ++ ++VV NL+GR Y T+N+S DV+ ERI ++ + R+I +S A+
Sbjct: 112 IEESVRHSDVVYNLVGRNYPTKNFSLADVHIEGTERIVEAVAKY-DVDRYIHVSSYNANP 170
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
S S F+TK E+ P TI+RPA M G ED LL K A F +
Sbjct: 171 ESTSEFFATKGYGEKVAREIFPETTIVRPAPMFGFEDNLLLKLASVTNLFT----ANNMQ 226
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
R PV+V+DV A+ L DD T+ + +EL GP ++ E+AEL+ I + ++ V
Sbjct: 227 ERYWPVHVIDVGEALEKMLFDDNTA-AQTFELYGPKNYSTAEIAELVDREIYKKRRHINV 285
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
P K + P LL ++ + + + DE+ D ++ ++A TF+DLG+ P +
Sbjct: 286 P----KWLLKPTAGLLNRLLW----WDIMSADEVEREFHDQVIDESAKTFKDLGMEPSDI 337
Query: 310 KGYPTEYLIWYRKG 323
+ YL +R
Sbjct: 338 SKWTYHYLKGFRSS 351
>gi|24667554|ref|NP_649234.1| CG6020, isoform A [Drosophila melanogaster]
gi|442633716|ref|NP_001262116.1| CG6020, isoform B [Drosophila melanogaster]
gi|7296323|gb|AAF51613.1| CG6020, isoform A [Drosophila melanogaster]
gi|440216083|gb|AGB94809.1| CG6020, isoform B [Drosophila melanogaster]
Length = 416
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG TGF+GRYV +L K G+Q+++P+RG + D LK+ GDLGQ++ +N
Sbjct: 61 FNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDLGQVLFHFYNL 120
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D +I+ + +NVVINL+GR++ET+N+ F+DV+ AERIA IA+E G+ R I +S
Sbjct: 121 EDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIARE-AGVERLIHLSS 179
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L ++ S +K E V P ATI+RPA + G+EDR L +A +
Sbjct: 180 LNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWR 239
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G + QPVYV DVA A+ A KD S G+IY+ GP + + EL +
Sbjct: 240 RQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDP-DSAGRIYQAVGPKRYQLSELVDW 298
Query: 236 MYDTIRE 242
+ +R+
Sbjct: 299 FHRLMRK 305
>gi|332016616|gb|EGI57488.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Acromyrmex echinatior]
Length = 414
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 166/318 (52%), Gaps = 27/318 (8%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ TVFG GF+GRYV +L K+G+Q+++P+RG D LKL GDLGQ++ F+
Sbjct: 65 FNGIVCTVFGAGGFVGRYVCNRLGKIGTQLIIPYRGDMYDCFRLKLCGDLGQVLFHPFHL 124
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RDD +I+ + +NVVINLIGR++ET+N++F +V+ A R+A + KE + FI +S
Sbjct: 125 RDDESIRKCIKYSNVVINLIGRDWETKNFTFHEVHVEGARRLARLCKE-ANVKHFIHVSA 183
Query: 125 LGASSSSPSRVFS-------TKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK 177
L S + TK E AV E P TI+RPA + G EDR L+ ++ ++
Sbjct: 184 LNVGDEVESHILKGGSEFLRTKWEGECAVQEEFPEVTIIRPADIWGQEDRFLSFYSGILR 243
Query: 178 -KFNFFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
F PL+ G T QPV V DV+A +TA +D + GK Y+ GP + + EL +
Sbjct: 244 HHFRSVPLWEKGEKTEKQPVAVYDVSAGITAIARDPRNTAGKTYQFVGPKRYKLSELLDW 303
Query: 236 MYDTIREYPHYVKVPFPVAK---------AVAMPREILLKKVPFPLPRPGLFNLDEINAY 286
H +++ PV A +I L + P G +
Sbjct: 304 F--------HRIRIRDPVEDGYKRMHLKYAPLFQLKITLNEYLSPAYPLGNLQWERFERE 355
Query: 287 TSDTIVSDNALTFQDLGI 304
+VS+ T +DLGI
Sbjct: 356 AISDVVSNKLPTLEDLGI 373
>gi|194749729|ref|XP_001957289.1| GF10349 [Drosophila ananassae]
gi|190624571|gb|EDV40095.1| GF10349 [Drosophila ananassae]
Length = 416
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG TGF+GRYV +L K G+Q+++P+RG + D LK+ GDLGQ++ +N
Sbjct: 61 FNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDLGQVLFHFYNL 120
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D +I+ + +NVVINL+GR++ET+N+ F DV+ AERIA I++E G+ RFI +S
Sbjct: 121 EDVPSIREAVKHSNVVINLVGRDFETKNFKFRDVHSNGAERIARISRE-AGVDRFIHLSS 179
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L ++ S +K E V P ATI+RPA + G+EDR L +A +
Sbjct: 180 LNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWR 239
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G + QPV+V DVA A+ A KD S G+IY+ GP + + EL +
Sbjct: 240 RQFRSMPLWHKGEKTVKQPVFVSDVAQAIVNAAKDP-DSAGRIYQAVGPKRYQLSELVDW 298
Query: 236 MYDTIRE 242
+ +R+
Sbjct: 299 FHRLMRK 305
>gi|315053839|ref|XP_003176294.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Arthroderma gypseum
CBS 118893]
gi|311338140|gb|EFQ97342.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Arthroderma gypseum
CBS 118893]
Length = 391
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 176/323 (54%), Gaps = 21/323 (6%)
Query: 7 GIIATVFGTTGFLGRYVVQQL------AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
G ATVFG TGFLGRY+V +L ++ G V+VP+R E RHLK+ GDLG++V M
Sbjct: 58 GHTATVFGATGFLGRYIVNRLGMGSPLSRQGCTVIVPYRE-EMTKRHLKVTGDLGRVVFM 116
Query: 61 KFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+++ R+ +I+ ++ +++V NLIGR Y T+N+S+ED++ ERI ++ + R++
Sbjct: 117 EYDLRNTQSIEESVRHSDIVYNLIGRNYPTKNFSYEDIHVEGTERIVESVAKY-DVDRYV 175
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
+S AS SPS F TKA E P TI+RPA M G EDRLL++ A F
Sbjct: 176 HVSSYNASLDSPSEFFRTKAQGENVARSIFPETTIVRPAPMFGFEDRLLHRLAGVTNIFT 235
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
+ R PV+ +DV A+ L+++ T+ + +EL GP ++ E++EL+ I
Sbjct: 236 SNHM----QERYWPVHAIDVGRALELMLQEEWTT-AQTFELYGPKNYSTKEISELVDREI 290
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
+ ++ VP KA+ P L ++ L P + + DE+ D + A TF+
Sbjct: 291 IKKRRHINVP----KAIMKPAAYWLNRL---LWWP-ITSADEVEREFIDQQIDPTAKTFK 342
Query: 301 DLGIVPHKLKGYPTEYLIWYRKG 323
DLGI P L YL+ YR
Sbjct: 343 DLGIEPTDLNTLTFHYLLGYRSS 365
>gi|158298342|ref|XP_318516.3| AGAP010792-PA [Anopheles gambiae str. PEST]
gi|157014355|gb|EAA13714.3| AGAP010792-PA [Anopheles gambiae str. PEST]
Length = 385
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 182/329 (55%), Gaps = 26/329 (7%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG+TGFLGRYV +L K+GSQV++P+R + LKL+GDLGQ++ ++
Sbjct: 39 FNGIVATVFGSTGFLGRYVCNKLGKIGSQVIIPYRADHYEAMRLKLVGDLGQVLFHPYDL 98
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD+ I + +NVVINL+GR++ET+N++F+DV+ A R+A IA+E G+ F+ +S
Sbjct: 99 RDEEAIYKAVKYSNVVINLVGRDWETKNFTFKDVHVDGARRLARIARE-AGVETFVHVSS 157
Query: 125 LGAS-------SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L A+ + S+ ++K E AV E P A + RP+ + G EDR L +A +
Sbjct: 158 LNATPNPQPFFTKEGSKFLASKYYGELAVREEFPDAIVFRPSDIYGQEDRFLRYYAHIWR 217
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G I QPVY D+A + A+K D S G+ Y+ GP + + L +
Sbjct: 218 RQFRAMPLWYKGERTIKQPVYCSDLAQGIVNAIK-DSDSQGQTYQAVGPRRYKLSALVDW 276
Query: 236 MYDTIR---EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN-AYTSDTI 291
+ +R ++ Y + M ++LL ++ P G + + + Y SD
Sbjct: 277 FHQVMRKDEKWWGYYRYDLRYDPTFRM--KVLLTELVSPSFPIGDVHTERVEREYVSDE- 333
Query: 292 VSDNALTFQDLGI--------VPHKLKGY 312
V T +DLG+ VP +L+ Y
Sbjct: 334 VEKGVPTLEDLGVNLTYMEDQVPWELRPY 362
>gi|302883650|ref|XP_003040724.1| hypothetical protein NECHADRAFT_67928 [Nectria haematococca mpVI
77-13-4]
gi|256721614|gb|EEU35011.1| hypothetical protein NECHADRAFT_67928 [Nectria haematococca mpVI
77-13-4]
Length = 375
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 174/315 (55%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G TVFG TG LGRY+V +LA+ G V++P+R E RHLK+ GDLG++V ++ + R+
Sbjct: 48 GHTVTVFGATGQLGRYIVNRLARQGCTVVIPYRE-EMTKRHLKVTGDLGRVVFVEHDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+A++ ++ V NLIGR+Y T+N+S EDV+ ERI ++ + R+I +S
Sbjct: 107 TPSIEASVRHSDAVFNLIGRDYPTKNFSLEDVHIEGTERIIEAVAKY-DVDRYIHVSSHS 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+S S S + TK AEE P TI+RPA + G ED LL K A F
Sbjct: 166 ANSQSTSEFYRTKGRAEEIAREVFPETTIVRPAPIFGFEDNLLLKLAGVTNLFT----SN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ + PV+ +D+ AA+ DD T+ G+ +EL GP +++ E+A+++ I + +
Sbjct: 222 NMQEKFYPVHSIDLGAALEKIFYDD-TTAGQTFELYGPKQYSMREIADMVDKEIYKQRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K VA EIL K + + + DE+ D ++ A TF+DLGI P
Sbjct: 281 INVPKAILKPVA---EILNKVLWW-----HTLSADEVEREYMDQVIDPEAKTFKDLGIEP 332
Query: 307 HKLKGYPTEYLIWYR 321
+ + YL +R
Sbjct: 333 GDIANFTYHYLQGFR 347
>gi|195172153|ref|XP_002026863.1| GL12793 [Drosophila persimilis]
gi|194112631|gb|EDW34674.1| GL12793 [Drosophila persimilis]
Length = 413
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG TGF+GRYV +L K G+Q+++P+RG + + LK+ GDLGQ++ +N
Sbjct: 58 FNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGEDSEVIRLKVTGDLGQVLFHFYNL 117
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D +I+ + +NVVINL+GR++ET+N+ F+DVN AERIA I +E G+ RFI +S
Sbjct: 118 EDAASIRNAVKHSNVVINLVGRDFETKNFKFKDVNVTGAERIARICREV-GVERFIHLSS 176
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L ++ S +K E V P ATI+RPA + G+EDR L +A +
Sbjct: 177 LNVEANPKPLYVKGGSEWLRSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWR 236
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G + QPVYV DVA A+ A K+ S G+IY+ GP + + EL +
Sbjct: 237 RQFRSMPLWHKGERTVKQPVYVTDVAQAIINAAKEP-DSAGRIYQAVGPKRYQLSELVDW 295
Query: 236 MYDTIRE 242
+ +R+
Sbjct: 296 FHRLMRK 302
>gi|126736160|ref|ZP_01751903.1| NADH-ubiquinone oxidoreductase, putative [Roseobacter sp. CCS2]
gi|126714326|gb|EBA11194.1| NADH-ubiquinone oxidoreductase, putative [Roseobacter sp. CCS2]
Length = 326
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/316 (36%), Positives = 176/316 (55%), Gaps = 7/316 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRY+ +++AK G +V V R ++ ++ G +GQ+ P+ N RDD
Sbjct: 4 LVTIFGGSGFVGRYIARRMAKEGWRVRVAVRNV-NEAMFVRPYGVVGQVEPVFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A + A+ V+N +G E +F V RIA IA HG I R + IS +GA
Sbjct: 63 SVEAVINGADAVVNCVGVLDEVGKNTFSAVQTEGPARIARIAAAHG-ITRMVHISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ + S TKAA E VL+ +P A I+RP+ + G ED+ N++A + P+ G
Sbjct: 122 ADAASEYSKTKAAGESGVLQHMPDAMILRPSIIFGPEDQFFNRFAGMSRLGPVLPVIG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPVYV DVAAA + G + G +YELGGPD+ T EL +LM D IR V
Sbjct: 181 DTRFQPVYVDDVAAAAVKGVL--GEAEGGVYELGGPDVHTFRELMQLMLDVIRRRRLIVN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
PF +A+ +A L++K+ F L + G D++ D +V+D+A +F LG+ P
Sbjct: 239 TPFWMARVMAFGFG-LVRKLSFGLIK-GPVTKDQVINLAVDNVVADDARSFAALGMQPTA 296
Query: 309 LKGYPTEYLIWYRKGG 324
++ +YL +R G
Sbjct: 297 MEAVLPDYLWRFRPSG 312
>gi|296211141|ref|XP_002752283.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Callithrix jacchus]
Length = 289
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 141/220 (64%), Gaps = 4/220 (1%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG++ATVFG TGFLGRY+V L +MGSQV++P+R + D HL+ MGDLGQ++ M+++
Sbjct: 73 FSGVVATVFGATGFLGRYIVNHLGRMGSQVVIPYRCDKYDIMHLRPMGDLGQLLFMEWDS 132
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
R+ ++I+ + +NVVINLIGR++ET+++ F DV + + IA ++KE G+ +FI +S
Sbjct: 133 REKDSIRRAVQHSNVVINLIGRDWETKHFDFADVYAKIPQAIAQVSKE-AGVGKFIHVSH 191
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L A S S+ KA E V P A I++P+ + G EDR LN ++ +++F PL
Sbjct: 192 LNADMKSSSKYLRNKAVGETVVREAFPEAIIIKPSDIFGREDRFLNHFSN-MRRFGPIPL 250
Query: 185 FGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGG 223
G T QPVYV DV+ + A+KD S GK + G
Sbjct: 251 VSLGWKTVKQPVYVSDVSKGIMNAIKDPHAS-GKTFAFVG 289
>gi|409435718|ref|ZP_11262926.1| NAD-dependent epimerase/dehydratase [Rhizobium mesoamericanum
STM3625]
gi|408752476|emb|CCM74073.1| NAD-dependent epimerase/dehydratase [Rhizobium mesoamericanum
STM3625]
Length = 326
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 165/320 (51%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR++V+ LAK G ++ V R D L+ +G++GQI ++ N R N
Sbjct: 9 LVTVFGGSGFIGRHIVRALAKRGYRIRVAVR-RPDLAGFLQPIGNVGQISFVQANLRYRN 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ V+N +G +E SFE V F A +A A+ G + I IS +GA
Sbjct: 68 SVDRAVEGADFVVNCVGILHEAGRNSFEAVQEFGARAVAEAARSVGA--KLIHISAIGAH 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TK AE A+ P A I RP+ + G ED NK+A + F PL G G
Sbjct: 126 AHSDSGYARTKGRAEAAIHAIKPDAIIFRPSVVFGPEDSFFNKFADMARVSPFLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYVVDVA AV A++ T+ G++YELGGP++ T E E+M R V
Sbjct: 186 KTKFQPVYVVDVAQAVARAVEGKVTA-GEVYELGGPEVLTFRECLEIMLKATRRKNRLVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + VPF P D++ D IVS A T + +G+
Sbjct: 245 LPFSIASLMGN----IASLVPFVTPP---ITADQVRLLKKDNIVSKEAEAEGRTLKGIGV 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + YL+ YR G
Sbjct: 298 TPTLVSSVIGSYLVHYRPQG 317
>gi|325181760|emb|CCA16216.1| NADH dehydrogenase putative [Albugo laibachii Nc14]
Length = 344
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 176/326 (53%), Gaps = 19/326 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G+ TVFG TGF+GRYV +L + G ++ P+RG + H+++M DLG + F+ R
Sbjct: 22 NGLTVTVFGCTGFIGRYVCAELGEKGHTIVAPYRGDISEVNHIRVMADLGNTASVPFSAR 81
Query: 66 DDNTIKATMAKANVVINLIGREYETR-------NYSFEDVNHFMAERIAGIAKEHGGIMR 118
D +++ + ++VV+NLIG+ Y+T+ NY+++DV+ AE IA + E I R
Sbjct: 82 DPASVREAVKGSDVVLNLIGKHYQTKHLLPWWINYTYDDVHVHAAETIARVCAEE-KIPR 140
Query: 119 FIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKK 178
FI +S + A +SPS ++K E AV + P A I+R A+ G EDRLLN W +
Sbjct: 141 FIHVSSILAKPNSPSIWAASKYRGEIAVRKAFPKANIVRLGAIYGPEDRLLN-WIANRMQ 199
Query: 179 FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD 238
PL +G +QP +V DVAAA+ A D+ + G+ +EL G + +T ELA+ ++D
Sbjct: 200 IGGVPLVDNGDAVLQPAFVNDVAAALYAMTIDEYMT-GETFELVGDEKYTAKELADYVFD 258
Query: 239 TIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
+ P+ + +P VA+ + E FP PR F D + + N
Sbjct: 259 ATKHPPNLINLPLSVARLIGKFIE------QFPDPR---FTADWAVRLGLFQVKTSNFPG 309
Query: 299 FQDLGIVPHKLKGYPTEYLIWYRKGG 324
F++L I P K++ +L+ Y + G
Sbjct: 310 FRELDIEPAKMEKEAPNFLLKYNRAG 335
>gi|255264445|ref|ZP_05343787.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Thalassiobium sp.
R2A62]
gi|255106780|gb|EET49454.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Thalassiobium sp.
R2A62]
Length = 325
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 171/320 (53%), Gaps = 16/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRYV +++A+ G +V V R ++ +K G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYVARRMAQAGWRVRVAVR-RPNEAMFVKPYGAVGQVEPIFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M A+ V+N +G ETR SFE V A R+A IA G + R + IS +GA
Sbjct: 63 SVAAAMQGADAVLNCVGILAETRRQSFEAVQAEGAGRVARIAAATG-VDRMVHISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+++ S TKAA E+AVL +P A I+RP+ + G ED N++A + P+ G
Sbjct: 122 ANADSTYSQTKAAGEKAVLEAMPNAMIVRPSIVFGPEDDFFNRFASMSRFGPVLPVVG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA A + D + IYELGGPD+ + EL M + +R +
Sbjct: 181 DTKFQPVYVDDVAQAAVMGVTGDASG---IYELGGPDVASFRELMTQMLEIVRRRRLVLN 237
Query: 249 VPFPVAKAVA----MPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+P AK +A + + L + P+ D+I + D +VS++A F DLGI
Sbjct: 238 IPTFAAKLMAFGFGIAETLSLGIIKAPI------TSDQIKNLSVDNVVSEDARGFADLGI 291
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P T+YL +R G
Sbjct: 292 APVPTDAVLTDYLWRFRPSG 311
>gi|302689553|ref|XP_003034456.1| hypothetical protein SCHCODRAFT_14900 [Schizophyllum commune H4-8]
gi|300108151|gb|EFI99553.1| hypothetical protein SCHCODRAFT_14900 [Schizophyllum commune H4-8]
Length = 363
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 178/323 (55%), Gaps = 27/323 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG TVFG TGFLGRY+V +L K+G+QV VP+R ED RHLK MGDLGQIVP++++ R
Sbjct: 47 SGHRVTVFGCTGFLGRYLVSKLGKIGTQVTVPYRD-EDTKRHLKPMGDLGQIVPLEWDIR 105
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ I + +++V NL+GR+YET+N+++ V+ A RIA IAK+ G+ R + +S L
Sbjct: 106 NEQQIAECLRHSDIVYNLVGRDYETKNFNYSAVHADGAARIAHIAKQE-GVERLVHVSHL 164
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S S + K EE V P ATI+RP+ M G ED+LLN A +P++
Sbjct: 165 NAAPDSKSAFYRAKFEGEERVKEAFPEATIIRPSIMYGYEDKLLNNMA-------IWPIY 217
Query: 186 ---GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIR 241
T+++PV+V+DVA A+ + + + + L GP T L +L+ ++R
Sbjct: 218 WRLNQSQTKVRPVHVMDVAQALANLM--EMPRIERTLNLPGPSTLTYEFLLDLVSSVSLR 275
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN-AYTSDTIVSDNALTFQ 300
+P +AK A ++ K V +P P DEI Y D V + +
Sbjct: 276 PASTAPALPKGLAKWAA---NLVSKSVWWPTLSP-----DEIERRYIDDATVPGD---WD 324
Query: 301 DLGIVPHKLKGYPTEYLIWYRKG 323
+G+ P +++ + YL YR
Sbjct: 325 VVGVTPSEIENHAITYLRRYRSA 347
>gi|115522533|ref|YP_779444.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
gi|115516480|gb|ABJ04464.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
Length = 328
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 177/326 (54%), Gaps = 20/326 (6%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+S + TVFG +GFLGR++V LA+ ++ V R E HL+ +G +GQI ++ N
Sbjct: 4 HSDTLVTVFGGSGFLGRHIVSALARRDYRIRVAVRRPELAG-HLQPIGRVGQIHAVQANL 62
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
R+ ++ A M A VV+NL+G ET +F+ V A +A A R + +S
Sbjct: 63 RNPASVAAAMGDAGVVVNLVGILAETGKQTFDAVQGQGAGAVAQAAATA--GARMVHVSA 120
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GA ++S SR KAA E+AVL +P ATIMRP+ + G ED+ N++A + F PL
Sbjct: 121 IGADAASASRYARAKAAGEKAVLAAVPAATIMRPSVVFGPEDQFTNRFAALARMLPFVPL 180
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G+ R+QPVYV DVA AV A++ G +YELGGP++ T+ E+ E + I+
Sbjct: 181 VGGGANRLQPVYVGDVAQAVATAVEGLAKP-GAVYELGGPEVLTMREVIEAILQIIQRRR 239
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LT 298
+ +PF +AK A LL+ PG+ L D++ D +VS+ A LT
Sbjct: 240 TLLSLPFGLAKLQAA----LLQFA------PGILQLTPDQVELLKVDNVVSEAAKAAGLT 289
Query: 299 FQDLGIVPHKLKGYPTEYLIWYRKGG 324
Q LGI P L+ YL +RK G
Sbjct: 290 LQGLGIAPDSLQAMAPSYLWRFRKTG 315
>gi|255725854|ref|XP_002547853.1| hypothetical protein CTRG_02150 [Candida tropicalis MYA-3404]
gi|240133777|gb|EER33332.1| hypothetical protein CTRG_02150 [Candida tropicalis MYA-3404]
Length = 390
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 173/310 (55%), Gaps = 29/310 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFN 63
+G ATVFG +GFLGRY+ +LA+ G+ +VPFR DD R LK+ GDLG + ++ +
Sbjct: 55 TGYTATVFGASGFLGRYLTSKLARHGTTTIVPFR---DDMKKRFLKVTGDLGVVNFVEID 111
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R+ +I+ ++A +++VIN IG +Y T+N+S DVN +AERIA +A + + R+I +S
Sbjct: 112 ARNLQSIEDSVANSDIVINCIGADYNTKNFSMADVNIALAERIA-LATKKANVPRYIHVS 170
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A S S ++TK E+ V +P T++RPA M G ED+LLN +K + P
Sbjct: 171 SYNADPKSESVFYATKGIGEQVVRDIIPETTLVRPAPMYGREDQLLNYLGPKIKMWT--P 228
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
+ I PVYV+DVA + DD T+ G+ +EL GP+ + HE+ ++ +Y
Sbjct: 229 --NKNAKEIWPVYVLDVARGLEKIAFDDSTA-GQTFELYGPEKVSFHEIRNMINGITEKY 285
Query: 244 PHY---------VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
++P P+AKA+A ++++ K L N D++ + + +
Sbjct: 286 AQVGPFSYRFADYEIPLPLAKAIAQVQQLVWWK---------LTNPDQVQRHLINQHIDP 336
Query: 295 NALTFQDLGI 304
NA TF DLGI
Sbjct: 337 NAKTFHDLGI 346
>gi|339018869|ref|ZP_08644991.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
tropicalis NBRC 101654]
gi|338752030|dbj|GAA08295.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
tropicalis NBRC 101654]
Length = 326
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 178/322 (55%), Gaps = 15/322 (4%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G IATV G GF+G+YVVQ LA+ G V V R D L+ +G +GQI P +
Sbjct: 12 TGKIATVLGGNGFVGQYVVQNLAEAGYTVRVASR-RPDRATLLRPLGRVGQIAPFYASVL 70
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
DD ++ + A++V+NL+G T E VN AER+A ++ G+ F+Q+S L
Sbjct: 71 DDASVACVVEGASIVVNLVGVLGSTSRQGLEAVNVLGAERVARLSAA-AGVDSFVQMSAL 129
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS S+ S ++AA E+AV R LP A+I+RP+ + G ED N + + P++
Sbjct: 130 GASPSAASAYGRSRAAGEDAVRRHLPHASIVRPSIIFGPEDHFFNLFGTMARYLPILPVY 189
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE-LMYDTIREYP 244
G +TR+QPV+V DVA A+ A + D T GKI+ LGGP++ T+ ++ + ++ +T R+
Sbjct: 190 G-ANTRVQPVFVGDVAQAL-ARIALDTTLAGKIWSLGGPEVLTMRQIYQWVLKETQRD-- 245
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
++ F V A+A + + +++P L D++ + D +V F++LGI
Sbjct: 246 ---RLLFTVPSALASLQASIFERLPGK-----LITRDQLRMLSEDNVVPPGQPGFEELGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGGPK 326
P ++ YL YR GG +
Sbjct: 298 APRSIENTVPFYLDRYRAGGGR 319
>gi|355563907|gb|EHH20407.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Macaca mulatta]
gi|355785824|gb|EHH66007.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Macaca fascicularis]
Length = 377
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 139/219 (63%), Gaps = 4/219 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L ++GSQV++P R D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRIGSQVIIPHRCDIYDTMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ F+DV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRAVEHSNVVINLIGRDWETKNFDFDDVYVKIPQAIAQVSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+AV P A I++ + G EDR LN +A ++F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKAVRDAFPEAIIIKLLDIFGREDRFLNSFAHL-RQFVLTPLG 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGG 223
T + QPVYVVDV+ + +KD S GK + G
Sbjct: 230 SLSWTTVKQPVYVVDVSKGIVNIVKDPDAS-GKTFAFVG 267
>gi|358333245|dbj|GAA31353.2| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Clonorchis
sinensis]
Length = 395
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 184/336 (54%), Gaps = 32/336 (9%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMK 61
++G++ATVFG TG LGR V+ LAK G+Q+++P+RG DP R LK++GDLGQI+ +
Sbjct: 52 FNGMVATVFGATGRLGRNVITHLAKTGTQIIIPYRG---DPYFVRDLKVLGDLGQILFLP 108
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
F+ D+NTI+ +M ++VVINLIG+E TRN++ E V+ A RIA I++E + R +
Sbjct: 109 FHLEDENTIRQSMRYSDVVINLIGKETHTRNFTLEQVHVDGAARIARISQEM-EVDRLVH 167
Query: 122 ISCLGASSS------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQF 175
+S L + PSR +KAA E VLRE P A I RPA M G +DR L +A
Sbjct: 168 VSALCQNPDPPCYVRGPSRFMKSKAAGELEVLRERPDAIIFRPADMFGEQDRFLCYYAAK 227
Query: 176 VKKFNF-----FPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTV 229
++ PL+ G I QPVY+ DVA + +L S G+IYE GP + +
Sbjct: 228 PRRVGMGRTTDVPLWALGQKTIKQPVYIGDVARGIVNSLTAPD-SPGRIYEAVGPHRYRL 286
Query: 230 HELAELMYDTIREYPHYVKVP--FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN-AY 286
+L + +Y R +P+ + + P+ + + + + PF + + + +
Sbjct: 287 DDLVKWIYFICRYFPNELNIVRISPIFLMRVLFNQYMARVTPF-------LSFERLEREF 339
Query: 287 TSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRK 322
++DT+ A T DL + P KL+ + YR+
Sbjct: 340 STDTL--SGAPTLADLNVKPTKLEDRIHHIVFLYRR 373
>gi|448528158|ref|XP_003869675.1| membrane protein [Candida orthopsilosis Co 90-125]
gi|380354028|emb|CCG23542.1| membrane protein [Candida orthopsilosis]
Length = 384
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/339 (33%), Positives = 184/339 (54%), Gaps = 36/339 (10%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFN 63
+G ATVFG +GFLGRY+V +LA+ G+ +VP+R DD R LK+ GDLG + ++ +
Sbjct: 49 TGYTATVFGASGFLGRYLVSKLARHGTTTIVPYR---DDLKKRFLKVAGDLGVVNFVEID 105
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R+ +I+ ++A +++VIN IG +Y T+N+S D+N +AERIA K+ G+ R+I +S
Sbjct: 106 ARNLQSIQDSVAHSDIVINCIGADYNTKNFSMADINIALAERIAQATKD-AGVPRYIHVS 164
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A S S ++TK E+ V +P +TI+RP+ M G ED LLN +K + P
Sbjct: 165 SYNADPKSESVFYATKGVGEQVVRDIIPDSTIVRPSQMFGREDNLLNYLGPKIKMWT--P 222
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
+I PV+V+DVA A+ DD T+ G++YEL GP+ + ++ ++++ Y
Sbjct: 223 --NRNQKQIYPVHVLDVARALEKIAYDDSTT-GQLYELYGPEKLSYLDIRQMIHGITENY 279
Query: 244 P---------HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
H +P P+AK +A ++++ K+ P D++ + D +
Sbjct: 280 AQAGPISYNFHDYDLPLPIAKLIAQAQQLVWWKLSNP---------DQMQRHIIDQHIDP 330
Query: 295 NALTFQDLGIVPH-KLKGYPTEYLIWYR------KGGPK 326
A TF DLG+ KL Y+ +R KGGP
Sbjct: 331 AAKTFADLGLHDQTKLADVLFSYVKQWRHPLIAQKGGPN 369
>gi|418296882|ref|ZP_12908725.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Agrobacterium
tumefaciens CCNWGS0286]
gi|355539057|gb|EHH08299.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Agrobacterium
tumefaciens CCNWGS0286]
Length = 326
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 173/321 (53%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI + N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRILAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFAQANLRYRD 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G E+ +F+ V F A+ IA A++ G + IS +GA
Sbjct: 68 SIVKAVEDADHVVNCVGILTESGRNTFDAVQEFGAKAIAEAARDAGATL--THISAIGAE 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ SP+ TK AE A+ LP A I+RP+ + G ED NK+A+ + F PL G G
Sbjct: 126 AGSPTGYGRTKGRAEAAIHSILPGAVILRPSIIFGPEDDFFNKFAKMARSMPFLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE-LMYDTIREYPHYV 247
TR QPVYV DVA AV + D G IYELGG D+ T + E ++ T R+ P +V
Sbjct: 186 KTRFQPVYVEDVAEAVARGV-DGKLKPGAIYELGGQDVMTFRDCLEAVLAATYRQRP-FV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLG 303
+PF +A +A ++ PL +P L +D++ D +VS N LT + +G
Sbjct: 244 DLPFGIASTIAKLTSLV------PLIKPPL-TVDQVTMLKKDNVVSAEAEKNGLTLEGIG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P ++ Y++ YR G
Sbjct: 297 ITPVRVASILPSYMVQYRTHG 317
>gi|400756261|ref|YP_006564629.1| NAD dependent epimerase [Phaeobacter gallaeciensis 2.10]
gi|398655414|gb|AFO89384.1| putative NAD dependent epimerase [Phaeobacter gallaeciensis 2.10]
Length = 329
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 172/316 (54%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ ++K G GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMYVKPYGVPGQVEPVLCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M A+ V+N +G E +F+ V A+RIA IA + G + + +S +GA
Sbjct: 63 SVAAVMQGADAVVNCVGILNELGKNTFDAVQADGADRIARIAADQG-VSTMVHVSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S +KAA E AVL +P A I+RP+ + G ED+ N++A + P+
Sbjct: 122 QDSDSAYAQSKAAGETAVLTHMPEAVILRPSIIFGAEDQFFNRFAAMTRLSPILPI-AHA 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA A +AL G + +YELGGP++ + L + M + I +
Sbjct: 181 DTKFQPVYVDDVAKAAVSALL--GQAKPGVYELGGPEVKSFGALMQQMLEVIDRRRLVLS 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P P+AK VA+ ++ ++ V F L + D++ +D +VSD A F +LGI P
Sbjct: 239 LPGPIAKLVALGFDV-MQFVSFQLIENKMLTRDQLKNLEADNVVSDGAKGFDELGIRPVS 297
Query: 309 LKGYPTEYLIWYRKGG 324
L +YL +R G
Sbjct: 298 LASVLPDYLWKFRPSG 313
>gi|452837903|gb|EME39844.1| hypothetical protein DOTSEDRAFT_74670 [Dothistroma septosporum
NZE10]
Length = 391
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 171/316 (54%), Gaps = 17/316 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G TVFG TG LGRY+V ++AK G V++P+R E RHLK+ GDLG++V ++++ R+
Sbjct: 64 GHCVTVFGATGQLGRYIVNRMAKAGCTVVIPYRE-EMAKRHLKVTGDLGRVVFIEYDLRN 122
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NL+GR+Y T+N+ EDV+ RIA ++ RFI +S
Sbjct: 123 TASIEESVRHSDIVYNLVGRDYPTKNFDLEDVHVEGTRRIANAVAKY-DCDRFIHVSSHS 181
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
SPS F TK E+ P TI+RPA + G EDRLL++ A K N G
Sbjct: 182 VHPESPSEFFRTKWQGEQVAREIFPETTIVRPAPLFGFEDRLLHRLA---KATNILTANG 238
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R+ PV+ +DV A+ A DD T+ G+ +EL GP +T+ E++EL+ I +
Sbjct: 239 -MQERLWPVHSIDVGKALEAIGLDDRTA-GQTFELFGPKQYTMAEISELVDREIFHKRRH 296
Query: 247 VKVPFPVAK-AVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ VP P+ K A+ + L V + DE+ D + NA TF+DL I
Sbjct: 297 INVPKPILKFAMGILNRALWWSVG---------SADEVEREFMDQFIDKNAKTFKDLDIE 347
Query: 306 PHKLKGYPTEYLIWYR 321
P + + +YL YR
Sbjct: 348 PGDIANFTYKYLQGYR 363
>gi|407784781|ref|ZP_11131930.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Celeribacter
baekdonensis B30]
gi|407204483|gb|EKE74464.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Celeribacter
baekdonensis B30]
Length = 327
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 169/317 (53%), Gaps = 8/317 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G GF+GRY+ +++AK G +V V R ++ ++K G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGAGFVGRYIARRMAKEGWRVRVAVR-RPNESLYVKPYGAVGQVEPIFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A MA A+ V+N +G E SF + A RIA IA E + + + +S +GA
Sbjct: 63 SVRAAMAGADAVVNCVGVLTERGKNSFAAIQTDGAGRIARIAAEQA-VEQLVHVSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TKA E VL P A I+RP+ + GTED N++ + +K PL G G
Sbjct: 122 MQSDSVYSRTKAEGEAKVLAAFPKAVILRPSVIFGTEDEFFNRFGKMAEKSVVLPLVG-G 180
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
+T+ QPVYV DVA AAV A L G + +YELGGPD+ T+ L M + +
Sbjct: 181 NTKFQPVYVDDVAQAAVKAVL---GQADAGVYELGGPDVDTLKGLMGEMLVVLHRNRLVL 237
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+PF V + LL+ + L G+ D++ D +VS+ A TF DLG+ P
Sbjct: 238 NLPFWVGNIMGGVLS-LLQSMTGGLFHNGILTRDQVANLRVDNVVSEGAKTFADLGMAPT 296
Query: 308 KLKGYPTEYLIWYRKGG 324
L+ +Y+ YR G
Sbjct: 297 ALQAVLPDYMWVYRPSG 313
>gi|125977914|ref|XP_001352990.1| GA19302 [Drosophila pseudoobscura pseudoobscura]
gi|54641741|gb|EAL30491.1| GA19302 [Drosophila pseudoobscura pseudoobscura]
Length = 413
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG TGF+GRYV +L K G+Q+++P+RG + + LK+ GDLGQ++ +N
Sbjct: 58 FNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGEDSEVIRLKVTGDLGQVLFHFYNL 117
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D +I+ + +NVVINL+GR++ET+N+ F+DVN AERIA I +E G+ RFI +S
Sbjct: 118 EDAASIRNAVKHSNVVINLVGRDFETKNFKFKDVNVTGAERIARICREV-GVERFIHLSS 176
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L ++ S +K E V P ATI+RPA + G+EDR L +A +
Sbjct: 177 LNVEANPKPLYVKGGSEWLRSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWR 236
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G + QPV+V DVA A+ A K+ S G+IY+ GP + + EL +
Sbjct: 237 RQFRSMPLWHKGELTVKQPVFVTDVAQAIINAAKEP-DSAGRIYQAVGPKRYQLSELVDW 295
Query: 236 MYDTIRE 242
+ +R+
Sbjct: 296 FHRLMRK 302
>gi|241952751|ref|XP_002419097.1| NADH-ubiquinone oxidoreductase subunit, putative [Candida
dubliniensis CD36]
gi|223642437|emb|CAX42682.1| NADH-ubiquinone oxidoreductase subunit, putative [Candida
dubliniensis CD36]
Length = 453
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 170/310 (54%), Gaps = 29/310 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFN 63
+G ATVFG +GFLGRYV +LA+ G+ +VPFR DD R LK+ GDLG + ++ +
Sbjct: 118 TGYTATVFGASGFLGRYVTSKLARHGTTTIVPFR---DDMKKRFLKVTGDLGVVNFVEID 174
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R+ +I+ ++A +++VIN IG +Y+T+N+ D+N +AERIA K+ + R+I +S
Sbjct: 175 ARNLQSIEDSVAHSDIVINCIGVDYDTKNFKMADINIALAERIAEATKK-ANVPRYIHVS 233
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A S S ++TK E+ V +P +TI+RPA M G ED LLN VK + P
Sbjct: 234 SYNADPKSESVFYATKGIGEQVVRDIIPDSTIVRPAPMFGREDSLLNYLGPKVKMWT--P 291
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
+ + PVYV+DVA A+ DD T+ G+ +EL GP+ T E+ +++ Y
Sbjct: 292 --NKNAKEVWPVYVLDVAKALEKIAYDDSTA-GQTFELYGPEKVTFQEIRNMIHGITENY 348
Query: 244 PHY---------VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
+P P+AKA+A ++++ L N D++ + +
Sbjct: 349 AQVGPWSYQFADYAIPLPLAKAIAKVQQLVWW---------NLTNPDQVQRLVINQKIDP 399
Query: 295 NALTFQDLGI 304
NA TFQDLGI
Sbjct: 400 NAKTFQDLGI 409
>gi|146422498|ref|XP_001487186.1| hypothetical protein PGUG_00563 [Meyerozyma guilliermondii ATCC
6260]
gi|146388307|gb|EDK36465.1| hypothetical protein PGUG_00563 [Meyerozyma guilliermondii ATCC
6260]
Length = 382
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 178/325 (54%), Gaps = 25/325 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G ATVFG +GFLGRY+ ++AK G+ +VPFR E R LK+ GDLG + ++F+ R
Sbjct: 49 TGYTATVFGASGFLGRYLTSKIAKHGTYTIVPFRD-EMKSRFLKVSGDLGVVNFVEFDAR 107
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I+ ++A +++V N IG +Y T+N+S DVN + ERI K+ G+ RF+ +S
Sbjct: 108 NLKSIEDSVAHSDIVYNCIGADYNTKNFSMADVNIGLTERITQAVKD-AGVPRFVHVSSY 166
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S S ++TK E+ V LP +TI+RPA M G ED LLN +K + P
Sbjct: 167 NANPQSDSVFYATKGIGEQVVREILPQSTIVRPAPMYGREDTLLNYLGPKLKMWT--P-- 222
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ I PV+V+DVA A+ DD T +G+ YEL GP+ + +E+ ++++ +++
Sbjct: 223 NKNAKEIYPVHVLDVAEALEKIGFDDST-IGQTYELYGPEKMSFYEIRQMIHGITQDFSQ 281
Query: 246 Y---------VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA 296
++P P+AK A ++ K L N D+I + D + +A
Sbjct: 282 AGPFSYNHGDYQIPLPLAKLAAQLKQFAYWK---------LTNPDQIQRHLIDQKIDASA 332
Query: 297 LTFQDLGIVPHKLKGYPTEYLIWYR 321
TFQDLG+ +L Y+ +R
Sbjct: 333 KTFQDLGLETTQLADVLFTYVKQWR 357
>gi|326507416|dbj|BAK03101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 174/315 (55%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G TVFG TG LGRY+V +LA+ G V++P+R E RHLK+ GDLG++V ++ + R+
Sbjct: 48 GHTVTVFGATGQLGRYIVNRLARQGCTVVIPYRE-EMSKRHLKVTGDLGRVVFIEHDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+A++ ++ V NLIGR+Y T+N+S EDV+ ERI ++ + R+I +S
Sbjct: 107 TPSIEASVRHSDAVFNLIGRDYPTKNFSLEDVHIEGTERIVEAVCKY-DVDRYIHVSSHS 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+S S S + TK AEE + P TI+RPA + G ED LL K A F
Sbjct: 166 ANSQSVSEFYRTKGRAEEVARQLFPETTIVRPAPIFGFEDNLLLKLAGVTNLFT----SN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ + PV+ +DV AA+ DD T+ G+ +EL GP +++ E++ ++ I + +
Sbjct: 222 NMQEKFYPVHSIDVGAALEKIFYDD-TTAGQTFELYGPKKYSMEEISVMVDKEIYKQRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K VA EIL K + + + DE+ D ++ A TF+DLGI P
Sbjct: 281 INVPKAILKPVA---EILNKFLWW-----HTLSADEVEREYLDQVIDPEAKTFKDLGIEP 332
Query: 307 HKLKGYPTEYLIWYR 321
+ + YL +R
Sbjct: 333 GDIINFTYHYLQGFR 347
>gi|346326940|gb|EGX96536.1| NAD(P)-binding domain [Cordyceps militaris CM01]
Length = 377
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 174/312 (55%), Gaps = 15/312 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V+VP+R E RHLK+ GDLG++V ++++ R+
Sbjct: 48 GHTATVFGATGQLGRYIVNRLARQGCTVVVPYRE-EITKRHLKVTGDLGRVVFIEYDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+A++ +++V NL+GR+Y T+N+S DV+ ERI ++ + R+I +S
Sbjct: 107 TASIEASVRHSDIVYNLVGRDYPTKNFSLADVHVEGTERIVDAVAKY-DVDRYIHVSSHN 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
AS++S S F+TK EE P T++RPA + G ED LL K A + F
Sbjct: 166 ASTASASEFFATKGRGEEVARGIFPETTLVRPAPIFGFEDNLLLKLASVLNLFT----AN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ + PV+ +DV A + L DD T+ G+ +EL GP +++ ++AE++ I + +
Sbjct: 222 NMQEKFWPVHSIDVGAGLEKMLYDDSTA-GQTFELYGPKQYSMAQIAEMVDKEIFKQRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
V +P KA P +L K + + DE+ D ++ A TF+DLG+ P
Sbjct: 281 VNIP----KATLKPVAGVLNKALW----WHTMSADEVEREFIDQVIDPEAKTFKDLGLEP 332
Query: 307 HKLKGYPTEYLI 318
+ + YLI
Sbjct: 333 GDIANFTYHYLI 344
>gi|407767937|ref|ZP_11115316.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407288650|gb|EKF14127.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 335
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 177/337 (52%), Gaps = 33/337 (9%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
I TVFG TGF+GR++V++L + V VP R E + LK MG LGQ+VP+ + R++
Sbjct: 5 IVTVFGGTGFVGRHIVKRLLERDFIVRVPTRSFERV-KKLKPMGYLGQVVPVHCDVRNEE 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
T+K+ + + VINL+G Y+ + SF +++ A+RIA AK G+ F+ +S LG
Sbjct: 64 TLKSAIEGSEAVINLLGILYQRGSSSFMNIHVKAAKRIAEEAKAC-GVKTFLHMSALGVD 122
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP----- 183
+ + ++K A E+AV P A I RP+ + G ED+ LN++A + + P
Sbjct: 123 KNPHALYATSKLAGEKAVRAAFPDAVIFRPSVIFGPEDKFLNQFATMARYSSVLPVIGAP 182
Query: 184 -------------LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVH 230
+ GDG + QPVYV DVA A AL +G S GK YELGGP++++
Sbjct: 183 GLPKVELDKGKVDMLGDGGPKFQPVYVADVAEAFVTALV-EGKSAGKTYELGGPEVYSFM 241
Query: 231 ELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDT 290
L M R+ + VPF +A A L+ +P PL P D++ +D
Sbjct: 242 GLLRDMLQITRQRAILMPVPFWLASIKAF----FLQFLPKPLLTP-----DQVRLLKTDN 292
Query: 291 IVSDNALTFQDLGIVPHKLKGYPTEYLIWY---RKGG 324
+VSD A F +LGI P+ ++ YL + RK G
Sbjct: 293 VVSDGAEGFAELGITPNSVEAIAPTYLKRFCPPRKSG 329
>gi|342885331|gb|EGU85372.1| hypothetical protein FOXB_04083 [Fusarium oxysporum Fo5176]
Length = 678
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 174/315 (55%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G TVFG TG LGRY+V +LA+ G V++P+R E RHLK+ GDLG++V ++ + R+
Sbjct: 48 GHTVTVFGATGQLGRYIVNRLARQGCTVVIPYRE-EMSKRHLKVTGDLGRVVFIEHDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+A++ ++ V NLIGR+Y T+N+S EDV+ ERI ++ + R+I +S
Sbjct: 107 TPSIEASVRHSDAVFNLIGRDYPTKNFSLEDVHVEGTERIVEAVCKY-DVDRYIHVSSHS 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+S S S + TK AEE + P TI+RPA + G ED LL K A F
Sbjct: 166 ANSQSVSEFYRTKGRAEEVARQLFPETTIVRPAPIFGFEDNLLLKLAGVTNLFT----SN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ + PV+ +DV AA+ DD T+ G+ +EL GP +++ E++ ++ I + +
Sbjct: 222 NMQEKFYPVHSIDVGAALEKIFYDD-TTAGQTFELYGPKKYSMEEISVMVDKEIYKQRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP + K VA EIL K + + + DE+ D ++ A TF+DLGI P
Sbjct: 281 INVPKAILKPVA---EILNKFLWW-----HTLSADEVEREYLDQVIDPEAKTFKDLGIEP 332
Query: 307 HKLKGYPTEYLIWYR 321
+ + YL +R
Sbjct: 333 GDIINFTYHYLQGFR 347
>gi|240280566|gb|EER44070.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Ajellomyces
capsulatus H143]
Length = 378
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 167/317 (52%), Gaps = 27/317 (8%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 59 GHTATVFGATGFLGRYIVNRLASQGCTVIVPYRE-EMAKRHLKVTGDLGRVVFMEYDLRN 117
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR+Y T+N+S+EDV+ RIA ++ + RFI +S
Sbjct: 118 TQSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHVDGLARIAEATAKY-DVDRFIHVSSYN 176
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +SPS F TKA E+ P TI+RPA M G ED LL+K A F +
Sbjct: 177 ADMNSPSEFFRTKAQGEKLARMLFPETTIVRPAPMFGFEDNLLHKLAGITNLFTSNHM-- 234
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L D +S+G+ YEL GP ++ E+AEL+ I
Sbjct: 235 --RERYWPVHAIDVGHALEKMLFTD-SSVGQTYELYGPKNYSTAEIAELVDREI------ 285
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPG--LFNLDEINAYTSDTIVSDNALTFQDLGI 304
+ R L + P G + DE+ D + +A TF+DL I
Sbjct: 286 ------------IKRRRHLNQRTGPTNSSGGPTISADEVEMEFIDQKIDQSAKTFKDLDI 333
Query: 305 VPHKLKGYPTEYLIWYR 321
P ++ YL YR
Sbjct: 334 EPAEIANLTFYYLRGYR 350
>gi|68468399|ref|XP_721759.1| potential mitochondrial Complex I, 40kd subunit [Candida albicans
SC5314]
gi|68468642|ref|XP_721640.1| potential mitochondrial Complex I, 40kd subunit [Candida albicans
SC5314]
gi|46443563|gb|EAL02844.1| potential mitochondrial Complex I, 40kd subunit [Candida albicans
SC5314]
gi|46443691|gb|EAL02971.1| potential mitochondrial Complex I, 40kd subunit [Candida albicans
SC5314]
Length = 386
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 170/310 (54%), Gaps = 29/310 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFN 63
+G ATVFG +GFLGRYV +LA+ G+ +VPFR DD R LK+ GDLG + ++ +
Sbjct: 51 TGYTATVFGASGFLGRYVTSKLARHGTTTIVPFR---DDMKKRFLKVTGDLGVVNFVEID 107
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R+ +I+ ++A +++VIN IG +Y+T+N+ DVN +AERIA K+ + R+I +S
Sbjct: 108 ARNLQSIEDSVAHSDIVINCIGVDYDTKNFKMADVNIALAERIAEATKK-ANVPRYIHVS 166
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A +S S ++TK AE+ V +P TI+RPA M G ED LLN VK + P
Sbjct: 167 SYNADPNSESVFYATKGIAEQVVRDIIPDTTIVRPAPMYGREDSLLNYLGPKVKMWT--P 224
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
+ + PVYV+DVA A+ DD T+ G+ +EL GP+ T E+ +++ Y
Sbjct: 225 --NKNAKEVWPVYVLDVARALERIAYDDSTA-GQTFELYGPEKVTFQEIRNMIHGITENY 281
Query: 244 PHY---------VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
+P P+AK +A ++++ K L N D++ + +
Sbjct: 282 AQVGPWSYQFADYAIPLPLAKTIAKVQQLVWWK---------LTNPDQVQRLVINQKIDP 332
Query: 295 NALTFQDLGI 304
NA TF DLGI
Sbjct: 333 NAKTFHDLGI 342
>gi|254488150|ref|ZP_05101355.1| NADH-ubiquinone oxidoreductase [Roseobacter sp. GAI101]
gi|214045019|gb|EEB85657.1| NADH-ubiquinone oxidoreductase [Roseobacter sp. GAI101]
Length = 327
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 167/316 (52%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ ++ G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKAGWRVRVAVR-RPNEAIFVRPYGAVGQVEPVFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A + A+ V+N +G ET +FE + AERIA IA E G + +QIS +GA
Sbjct: 63 SVRAALLGADAVVNCVGILAETGKSTFEAIQADGAERIARIAAEEG-VSHMVQISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S TKA E VLR +P A I+RP+ + G ED N++A + P+ G
Sbjct: 122 GDAASEYAQTKAMGEAGVLRHMPDAVILRPSIIFGPEDEFFNRFAGMTRLSPAVPVIG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T QPVYV DVA A A+ D IYELGGPD+ + L + M I +
Sbjct: 181 DTLFQPVYVDDVARAAEMAVVGDAAP--GIYELGGPDVESFRALMQRMLGAIHRRRMVLG 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
VP A+ +A + +++ F L + G+ D++ +D +VS+ A F LGI P
Sbjct: 239 VPMFAARIMAFVFD-MIEAATFGLVKNGMVTRDQVKNLGNDNVVSEGAKGFDALGISPVS 297
Query: 309 LKGYPTEYLIWYRKGG 324
+ +YL +R G
Sbjct: 298 MAAVLPQYLWRFRPSG 313
>gi|157123088|ref|XP_001660001.1| NADH-ubiquinone oxidoreductase 39 kda subunit [Aedes aegypti]
gi|108874494|gb|EAT38719.1| AAEL009414-PA [Aedes aegypti]
Length = 401
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++G++ATVFG+TGFLGRYV +L K GSQV++P+R + LKL+GDLGQ++ ++
Sbjct: 55 FNGVVATVFGSTGFLGRYVCNKLGKTGSQVIIPYRADHYEALRLKLVGDLGQVLFTPYHL 114
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D+ +I + +NVVINL+GR++ET+N++F+DV+ A R+A I+K+ G+ +FI +S
Sbjct: 115 CDEESIYKAVKHSNVVINLVGRDWETKNFTFDDVHVQGARRLARISKQ-AGVEKFIHLSS 173
Query: 125 LGAS-------SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L + + S+ +K E AV E P A I RPA + G EDR L +A +
Sbjct: 174 LNCTPNPTPILTKEGSKFLKSKYYGELAVREEFPEAVIFRPADIYGQEDRFLRYYAHLWR 233
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ G + QPV+ DVA + A+K D S ++Y+ GP + + EL +
Sbjct: 234 RQFRGMPLWYKGERTVKQPVHCSDVAQGIVNAIK-DSDSQNQVYQAVGPRRYKLSELVDW 292
Query: 236 MYDTIRE 242
+ +R+
Sbjct: 293 FHREMRK 299
>gi|238880591|gb|EEQ44229.1| hypothetical protein CAWG_02493 [Candida albicans WO-1]
Length = 386
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 170/310 (54%), Gaps = 29/310 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFN 63
+G ATVFG +GFLGRYV +LA+ G+ +VPFR DD R LK+ GDLG + ++ +
Sbjct: 51 TGYTATVFGASGFLGRYVTSKLARHGTTTIVPFR---DDMKKRFLKVTGDLGVVNFVEID 107
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R+ +I+ ++A +++VIN IG +Y+T+N+ DVN +AERIA K+ + R+I +S
Sbjct: 108 ARNLQSIEDSVAHSDIVINCIGVDYDTKNFKMADVNIALAERIAEATKK-ANVPRYIHVS 166
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A +S S ++TK AE+ V +P TI+RPA M G ED LLN VK + P
Sbjct: 167 SYNADPNSESVFYATKGIAEQVVRDIIPDTTIVRPAPMYGREDSLLNYLGPKVKMWT--P 224
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
+ + PVYV+DVA A+ DD T+ G+ +EL GP+ T E+ +++ Y
Sbjct: 225 --NKNAKEVWPVYVLDVARALERIAYDDSTA-GQTFELYGPEKVTFQEIRNMIHGITENY 281
Query: 244 PHY---------VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
+P P+AK +A ++++ K L N D++ + +
Sbjct: 282 AQVGPWSYQFADYAIPLPLAKTIAKVQQLVWWK---------LTNPDQVQRLVINQKIDP 332
Query: 295 NALTFQDLGI 304
NA TF DLGI
Sbjct: 333 NAKTFHDLGI 342
>gi|126728022|ref|ZP_01743838.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Sagittula stellata
E-37]
gi|126710987|gb|EBA10037.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Sagittula stellata
E-37]
Length = 327
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 170/321 (52%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRY+ +++AK G +V V R ++ +K G +GQ+ P+ N RDD+
Sbjct: 4 LVTIFGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEALFVKPYGVVGQVEPVFCNIRDDD 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A A A+ V+N +G + +F+ V A RIA I KE G I R + IS +GA
Sbjct: 63 SVRAATAGADAVVNCVGTFDISGKNNFDAVQAEGATRIARITKERG-IDRMVHISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ + S S+K E VL +P A I+RP+ + G ED N++A + PL G
Sbjct: 122 TEARSAYASSKGEGEAGVLEHMPDAVILRPSVIFGPEDDFFNRFATMTRFGPVLPLVG-A 180
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
TR Q VYV DVA AAV L G S +YELGGPD+ T EL + M I +
Sbjct: 181 ETRFQTVYVDDVARAAVMGIL---GQSKPGVYELGGPDVMTFRELMKDMLKVIHRRKLIL 237
Query: 248 KVPF----PVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
+PF P+A + + ++ L VP + R D++ D +VS A TF DLG
Sbjct: 238 NIPFFIAAPMASVMGLVDKLTLGLVPAQITR------DQVKTLHHDNVVSGEAKTFADLG 291
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P ++ +YL +R G
Sbjct: 292 IKPTAVEAVLPDYLWRFRPSG 312
>gi|408387851|gb|EKJ67554.1| hypothetical protein FPSE_12262 [Fusarium pseudograminearum CS3096]
Length = 622
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 172/315 (54%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G TVFG TG LGRY+V +LA+ G V++P+R E RHLK+ GDLG++V ++ + R+
Sbjct: 48 GHTVTVFGATGQLGRYIVNRLARQGCTVVIPYRE-EMAKRHLKVTGDLGRVVFIEHDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+A++ ++ V NLIGR+Y T+N+S EDV+ ERI ++ + R+I +S
Sbjct: 107 TPSIEASVRHSDAVFNLIGRDYPTKNFSLEDVHIEGTERIVEAVCKY-DVDRYIHVSSHS 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+S S S + TK AEE P TI+RPA + G ED LL K A F
Sbjct: 166 ANSQSTSEFYRTKGRAEEVARSLFPETTIVRPAPIFGFEDNLLLKLAGVTNLFT----SN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ + PV+ +DV AA+ DD T+ G+ +EL GP +++ E++ ++ I + +
Sbjct: 222 NMQEKFYPVHSIDVGAALEKIFFDD-TTAGQTFELYGPKKYSMEEISVMVDKEIYKQRRH 280
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
V VP KA+ P LL KV + + DE+ D ++ A TF+DLGI P
Sbjct: 281 VNVP----KAILKPVAELLNKVLW----WHTMSADEVEREFLDQVIDPKAKTFKDLGIEP 332
Query: 307 HKLKGYPTEYLIWYR 321
+ + YL +R
Sbjct: 333 GDIINFTYHYLQGFR 347
>gi|114769805|ref|ZP_01447415.1| NADH-ubiquinone oxidoreductase [Rhodobacterales bacterium HTCC2255]
gi|114549510|gb|EAU52392.1| NADH-ubiquinone oxidoreductase [alpha proteobacterium HTCC2255]
Length = 330
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 166/314 (52%), Gaps = 8/314 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRYV Q++AK G +V V R ++ +K GD+GQ+ P+ N RD+
Sbjct: 7 LVTIFGGSGFVGRYVAQRMAKEGWRVRVAVR-RPNEALFVKTYGDVGQVEPILANIRDEK 65
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ +A + A+ V+N +G ET F D+ A +IA +A E G + F+ S +GA
Sbjct: 66 STRAAIIGADAVVNCVGILNETSKQKFTDLQSKGASQIAKLATECG-VKTFVHFSAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+S S+ +KA EE V A I+RP+ + G ED+ N++A K PL G G
Sbjct: 125 INSHSKYLKSKAEGEEMVKASFKNAVILRPSIVFGAEDQFFNRFATMAKLSPLIPLVG-G 183
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T+ QPVYV D+A AAV L G + IYELGGP + EL ++ IR V
Sbjct: 184 ETKFQPVYVDDIAKAAVKGVL---GEAKRGIYELGGPQAASFKELTIMLMGIIRRKRAIV 240
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+PF A ++ L+K L + D++ A D + S N + F++LGIVP
Sbjct: 241 NIPF-FAASIQGGIFDALQKFSLGLFTNTILTRDQVIALKKDNVTSKNKMGFKNLGIVPT 299
Query: 308 KLKGYPTEYLIWYR 321
++ EYL +R
Sbjct: 300 AMETILGEYLYRHR 313
>gi|116179562|ref|XP_001219630.1| hypothetical protein CHGG_00409 [Chaetomium globosum CBS 148.51]
gi|88184706|gb|EAQ92174.1| hypothetical protein CHGG_00409 [Chaetomium globosum CBS 148.51]
Length = 377
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 172/318 (54%), Gaps = 15/318 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V+VP+R E RHLK+ GDLG++V ++++ +
Sbjct: 50 GHTATVFGATGQLGRYIVNRLARQGCTVIVPYRE-EMAKRHLKVTGDLGRVVFIEYDLHN 108
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NL+GR Y T+N+S DV+ ERIA ++ + RFI +S
Sbjct: 109 TQSIEESVRHSDVVYNLVGRNYPTKNFSLGDVHIEGTERIAEAVAKY-NVDRFIHVSSYN 167
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ S S ++TK E+ P TI+RPA M G ED+LL K A F
Sbjct: 168 ANPQSASEFYATKGYGEKVARDIFPETTIVRPAPMFGFEDKLLLKLASVANLFT----AN 223
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ PV+V+DV A+ + DD T+ + +EL GP ++ E+AEL+ I + +
Sbjct: 224 NMQETYWPVHVIDVGEALEKMMFDDNTA-SQTFELYGPRQYSTAEIAELVDREIYKKRRH 282
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P KA+ P LL + + + + DEI D ++ + A TF+DLG+ P
Sbjct: 283 INLP----KALLKPAAGLLNRFIW----WDIMSADEIEREFHDQVIDETAKTFKDLGMEP 334
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ + YL +R
Sbjct: 335 SDISKWTYHYLKGFRSSA 352
>gi|85705656|ref|ZP_01036753.1| NADH ubiquinone oxidoreductase, putative [Roseovarius sp. 217]
gi|85669646|gb|EAQ24510.1| NADH ubiquinone oxidoreductase, putative [Roseovarius sp. 217]
Length = 335
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 171/317 (53%), Gaps = 9/317 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++A+ G +V V R ++ H+K G +GQ+ P+ N RDD
Sbjct: 12 LVTIYGGSGFVGRYIARRMAQAGWRVRVAVR-RPNEAIHVKPYGVVGQVEPVFCNIRDDA 70
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M A+ V+N +G SF+ + A R+A +A E G + + IS +GA
Sbjct: 71 SVRAVMQGADAVVNCVGTFDRKGKNSFDAIQAEGATRVARMAAEVG-VAHLVHISAIGAD 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S +KAA E +L+ P A I+RP+ + G ED+ N++A + P+ G
Sbjct: 130 AESDSAYARSKAAGEAGILKHFPGAVILRPSVIFGPEDQFFNRFAAMTRFGPVLPVVG-A 188
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
TR QPVYV DVA AAV A+ G + IYELGGP++ + L + M IR V
Sbjct: 189 ETRFQPVYVDDVAQAAVMGAM---GQAAPGIYELGGPEVASFRALMQQMLGVIRRSRLIV 245
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+PF VA +A E L++ V L P + D++ + D +VS+ A F LGI P
Sbjct: 246 NIPFGVAAILAGVME-LVQTVTLGLIPPQI-TRDQVRSLRVDNVVSEQAKGFDSLGISPT 303
Query: 308 KLKGYPTEYLIWYRKGG 324
L +YL +R G
Sbjct: 304 ALGAVLPDYLWRFRPAG 320
>gi|119713550|gb|ABL97602.1| NADH-ubiquinone oxidoreductase [uncultured marine bacterium
EB0_39F01]
gi|161170302|gb|ABX59272.1| predicted nucleoside diphosphate sugar epimerase [uncultured marine
bacterium EB000_55B11]
gi|297183830|gb|ADI19953.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 330
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 166/314 (52%), Gaps = 8/314 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRYV Q++AK G +V V R ++ +K GD+GQ+ P+ N RD+
Sbjct: 7 LVTIFGGSGFVGRYVAQRMAKEGWRVRVAVR-RPNEALFVKTYGDVGQVEPILANIRDEK 65
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ +A + A+ V+N +G ET F D+ A +IA +A E G + F+ S +GA
Sbjct: 66 STRAAIIGADAVVNCVGILNETSKQKFTDLQSKGASQIAKLATECG-VKTFVHFSAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+S S+ +KA EE V A I+RP+ + G ED+ N++A K PL G G
Sbjct: 125 INSHSKYLKSKAEGEEMVKASFKNAVILRPSIVFGAEDQFFNRFATMAKLSPLIPLVG-G 183
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T+ QPVYV D+A AAV L G + IYELGGP + EL ++ IR V
Sbjct: 184 ETKFQPVYVDDIAKAAVKGVL---GEAKRGIYELGGPQAASFKELIIMLMGIIRRKRAIV 240
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+PF A ++ L+K L + D++ A D + S N + F++LGIVP
Sbjct: 241 NIPF-FAASIQGGIFDALQKFSLGLFTNTILTRDQVIALKKDNVTSKNKMGFKNLGIVPT 299
Query: 308 KLKGYPTEYLIWYR 321
++ EYL +R
Sbjct: 300 AMETILGEYLYRHR 313
>gi|84500664|ref|ZP_00998913.1| NADH ubiquinone oxidoreductase, putative [Oceanicola batsensis
HTCC2597]
gi|84391617|gb|EAQ03949.1| NADH ubiquinone oxidoreductase, putative [Oceanicola batsensis
HTCC2597]
Length = 327
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 166/319 (52%), Gaps = 7/319 (2%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ T+FG +GFLGRY+ +++A+ G +V V R +D ++ G +GQ+ P+ N R
Sbjct: 2 SGLV-TIFGGSGFLGRYIARRMARQGWRVRVATR-HPNDAMFVRTYGVVGQVEPIFCNIR 59
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
DD++++ + ++ V+N +G E F+ V A R+A IA E G + R + IS +
Sbjct: 60 DDDSVRQALGHSDAVVNCVGILSEKGRNGFDAVQAEGAGRVARIAAEEG-VDRMVHISAI 118
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA +S S TKA E VL +P A I+RP+ M G ED N++A + P+
Sbjct: 119 GADETSDSDYARTKAMGEAKVLEHMPGAMILRPSIMFGAEDEFFNRFAGMTRFSPILPMV 178
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G TR QPVYV DVAAA A + GT+ G IYELGGPD T E M I
Sbjct: 179 G-GRTRFQPVYVDDVAAA--AEMGALGTAPGGIYELGGPDTRTFREFMREMLAVIHRRRA 235
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ +P +AK +A ++ + L D+I D +VS + F DLGI
Sbjct: 236 LMDLPIWMAKLMAFGL-TAVQVLSIGLIHNDTLTADQIVNLQRDNVVSGDHKGFDDLGIT 294
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P + +YL +R G
Sbjct: 295 PTATEVVLPDYLWRFRPSG 313
>gi|195442552|ref|XP_002069018.1| GK12296 [Drosophila willistoni]
gi|194165103|gb|EDW80004.1| GK12296 [Drosophila willistoni]
Length = 413
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 152/247 (61%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG +GF+GRYV +L K G+Q+++P+RG + + LK+ GDLGQ++ +N
Sbjct: 58 FNGIVATVFGASGFVGRYVCNKLGKSGTQMILPYRGDDSEIIRLKVCGDLGQVLFHFYNL 117
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D +I+ + +NVVINL+GR+YET+N+ F+DV+ A R+A I ++ G+ RFI +S
Sbjct: 118 EDPKSIREAVKHSNVVINLVGRDYETKNFKFKDVHVNGAARLASICRD-AGVERFIHLSS 176
Query: 125 LGASSSSP-------SRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L ++ S+ +K E V P ATI+RP+ + G+EDR L +A +
Sbjct: 177 LNVEANPEPLIIKGGSQWLKSKYEGELRVRDAFPNATIIRPSDIYGSEDRFLRYYAHIWR 236
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
++F PL+ +G + QPV+V DVA A+ A KD S G+IY+ GP + + EL +
Sbjct: 237 RQFRSMPLWYNGEKTVKQPVFVSDVAQAIINAAKDP-DSAGRIYQAVGPKRYQLSELVDW 295
Query: 236 MYDTIRE 242
+ +R+
Sbjct: 296 FHRLMRK 302
>gi|325291730|ref|YP_004277594.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Agrobacterium sp.
H13-3]
gi|325059583|gb|ADY63274.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Agrobacterium sp.
H13-3]
Length = 326
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 172/321 (53%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI + N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRMLAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFAQANLRYRD 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G E+ +F+ V F A+ IA A+ G + IS +GA
Sbjct: 68 SIVKAIEDADHVVNCVGILAESGRNTFDAVQEFGAKAIAEAARNAGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++SP+ TK AE A+ LP A I+RP+ + G ED NK+A+ + F PL G G
Sbjct: 126 ANSPTGYGRTKGRAEAAIHSVLPGAVILRPSIIFGPEDDFFNKFAKMARSLPFLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE-LMYDTIREYPHYV 247
T+ QPVYV DVA AV ++ D G IYELGG D+ T + E ++ T R+ P +V
Sbjct: 186 KTKFQPVYVEDVAEAVARSV-DGKLKPGAIYELGGQDVMTFRDCLEAVLAATYRQRP-FV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLG 303
+PF VA + ++ PL P L +D++ D +VS N LT + +G
Sbjct: 244 NLPFGVASMIGKIASLV------PLITPPL-TVDQVTMLKKDNVVSADAEKNGLTLEGIG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P ++ Y++ YR G
Sbjct: 297 ITPVRVASVLPSYMVHYRPHG 317
>gi|399042074|ref|ZP_10736929.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
CF122]
gi|398059456|gb|EJL51308.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
CF122]
Length = 326
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 166/320 (51%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR++V+ LAK G ++ V R D L+ +G++GQI ++ N R N
Sbjct: 9 LVTVFGGSGFIGRHIVRVLAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRN 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ V+N +G +ET SFE V F A +A A+ G + I IS +GA
Sbjct: 68 SVDRAVEGADYVVNCVGILHETGRNSFEAVQEFGARAVAEAARGVGA--KLIHISAIGAH 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TK AE A+ P A I RP+ + G ED NK+A + F PL G G
Sbjct: 126 AHSDSGYARTKGRAEAAIHAIKPDAIIFRPSVVFGPEDGFFNKFADMARISPFLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYVVDVA AV A+++ T+ G++YELGGP++ T E E+M V
Sbjct: 186 KTKFQPVYVVDVAEAVAKAVENKVTA-GEVYELGGPEVLTFRECLEIMLKATWRKNRLVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + VPF P D++ + IVS A T + +GI
Sbjct: 245 LPFGIASLIGRVASL----VPFITPP---ITADQVRLLKKNNIVSKEAEAEGRTLKGIGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + YL+ YR G
Sbjct: 298 TPTLVSSVIGSYLVQYRPHG 317
>gi|298710072|emb|CBJ31788.1| NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus]
Length = 376
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 169/322 (52%), Gaps = 34/322 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
VFG TGFLGR+V QL + G++ +P RGCE D R K+ DLGQ+V ++ D+ +++
Sbjct: 43 VFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMR 102
Query: 72 ATMAKANVVINLIGREYETR---------------NYSFEDVNHFMAERIAGIAKEHGGI 116
+ A+ V+NLIG+ YET+ N SF++VN +A +A AK G+
Sbjct: 103 DAIGNADTVVNLIGKHYETKHLCFTRKEDGAINRVNSSFKNVNVDVAGMLARAAKAQ-GV 161
Query: 117 MRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFV 176
F+ +S L A SPSR TK A E AV P ATI+RPA + G DRLL A
Sbjct: 162 KNFVHVSALAADPDSPSRWAQTKFAGELAVKEAFPEATIVRPAKLFGNNDRLLTWIALMA 221
Query: 177 KKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSM---GKIYELGGPDIFTVHELA 233
+ PL DG IQP+ +V A V A+ D+ ++ GK+ EL GP F+ E+A
Sbjct: 222 TRMGRVPLVNDGDNLIQPIDARNV-AQVLMAIIDNPENLDYRGKLVELAGPGEFSWREVA 280
Query: 234 ELMYDTIREYPHYVKVPFPVAKAVAMPR--EILLKKVPFPLPRPGLFNLDEINAYTSDTI 291
+L+ DT H +V ++ R +LL+++P P LF DE A + D +
Sbjct: 281 DLVLDTT----HRARVTDVEEMSMLFARGYGMLLEQLPNP-----LFTEDEALAMSVDVV 331
Query: 292 VSDN--ALTFQDLGIV-PHKLK 310
N ALT +D I P K++
Sbjct: 332 QKPNPDALTLEDFNITDPFKME 353
>gi|225714134|gb|ACO12913.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Lepeophtheirus salmonis]
gi|290462335|gb|ADD24215.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
[Lepeophtheirus salmonis]
Length = 419
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 179/335 (53%), Gaps = 28/335 (8%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG +ATVFG+TG LG+ + +L K+GSQ+++P+RG + + LK+ GDLGQ++ ++
Sbjct: 51 FSGKVATVFGSTGLLGKVISNRLGKIGSQIVIPYRGEQYNYFPLKMCGDLGQVLFSSYHL 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+DD +I M +++VIN IGRE+ET+N+ F DVN ERIA +AK+ G+ RF+ IS
Sbjct: 111 KDDESILKAMKYSDIVINAIGREWETKNFKFMDVNVHGPERIARLAKQ-AGVKRFVHISS 169
Query: 125 LGASSSSPSRVF--------STKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFV 176
+ A +P R F TK E AVL P ATI R A + G +D +N +A V
Sbjct: 170 INA-RENPDRAFLPRGSRWLQTKWQGENAVLEAFPEATIFRAADIYGHQDSFINHYASRV 228
Query: 177 K----KFNFFPLFGDGSTRIQ-PVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+ F PL+ G ++ PV+V D+ + A+ DD ++ G YE GP+I+ + +
Sbjct: 229 RLSSVNFRALPLWKKGEHTLKAPVHVSDLTTGIMNAI-DDESTKGVTYEAYGPEIYKLSD 287
Query: 232 LAELMYDTIREYP---HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS 288
+ + MY + + Y + V + + + +PF LD+I +
Sbjct: 288 IVDWMYYYMNKDAANWDYRRSDLRFDPTV-FAKALFFQSMPFGQQFYAKMGLDKIEKMS- 345
Query: 289 DTIVSDNAL---TFQDLGIVPHKL-KGYPTEYLIW 319
+SD+ L +DLG+ P + + P +W
Sbjct: 346 ---ISDDILGLPNLEDLGVSPGTIAEKMPPHLAVW 377
>gi|149204272|ref|ZP_01881239.1| NADH-ubiquinone oxidoreductase [Roseovarius sp. TM1035]
gi|149142157|gb|EDM30204.1| NADH-ubiquinone oxidoreductase [Roseovarius sp. TM1035]
Length = 327
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 169/317 (53%), Gaps = 9/317 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++A+ G +V V R ++ H+K G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAQAGWRVRVAVR-RPNEAMHVKPYGVVGQVEPVFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M A+ V+N +G SF+ V A RIA IA E G + + +S +GA
Sbjct: 63 SVRAVMQGADAVVNCVGTFDRKGKNSFDAVQDKGATRIARIAAEEG-VAHLVHLSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S +KAA E +L+ P A I+RP+ + G ED+ N+++ + P+ G
Sbjct: 122 ATSDSHYARSKAAGEAGILQHFPNAVILRPSVIFGPEDQFFNRFSGMTRLGPVLPVVG-A 180
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
TR QPVYV DVA AAV A+ G + IYELGGP+ + L + M IR
Sbjct: 181 DTRFQPVYVDDVAQAAVMGAM---GRATPGIYELGGPEAISFRGLMQQMLQVIRRRRLIA 237
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+PF VA +A E L++ V L P + D++ + D +V D A F LGI P
Sbjct: 238 NIPFGVAALMAGAME-LVQTVTLGLVPPQI-TRDQVRSLRRDNVVGDGAKGFDALGITPV 295
Query: 308 KLKGYPTEYLIWYRKGG 324
+ +YL +R G
Sbjct: 296 AVGAVLPDYLWRFRPAG 312
>gi|290561727|gb|ADD38261.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
[Lepeophtheirus salmonis]
Length = 419
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 179/335 (53%), Gaps = 28/335 (8%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG +ATVFG+TG LG+ + +L K+GSQ+++P+RG + + LK+ GDLGQ++ ++
Sbjct: 51 FSGKVATVFGSTGLLGKVISNRLGKIGSQIVIPYRGEQYNYFPLKMCGDLGQVLFSSYHL 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+DD +I M +++VIN IGRE+ET+N+ F DVN ERIA +AK+ G+ RF+ IS
Sbjct: 111 KDDESILKAMKYSDIVINAIGREWETKNFKFMDVNVHGPERIARLAKQ-AGVKRFVHISS 169
Query: 125 LGASSSSPSRVF--------STKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFV 176
+ A +P R F TK E AVL P ATI R A + G +D +N +A V
Sbjct: 170 INA-RENPDRAFLPRGSRWLQTKWQGENAVLEAFPEATIFRAADIYGHQDSFINHYASRV 228
Query: 177 K----KFNFFPLFGDGSTRIQ-PVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+ F PL+ G ++ PV+V D+ + A+ DD ++ G YE GP+I+ + +
Sbjct: 229 RLSSVNFRALPLWKKGEHTLKAPVHVSDLTTGIMNAI-DDESTKGVTYEAYGPEIYKLSD 287
Query: 232 LAELMYDTIREYP---HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS 288
+ + MY + + Y + V + + + +PF LD+I +
Sbjct: 288 IVDWMYYYMNKDAANWDYRRSDLRFDPTV-FAKALFFQSMPFGQQFYAKMGLDKIEKMS- 345
Query: 289 DTIVSDNAL---TFQDLGIVPHKL-KGYPTEYLIW 319
+SD+ L +DLG+ P + + P +W
Sbjct: 346 ---ISDDILGLPNLEDLGVSPGTIAEKMPPHLAVW 377
>gi|149912980|ref|ZP_01901514.1| NADH ubiquinone oxidoreductase, putative [Roseobacter sp. AzwK-3b]
gi|149813386|gb|EDM73212.1| NADH ubiquinone oxidoreductase, putative [Roseobacter sp. AzwK-3b]
Length = 327
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 172/320 (53%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ ++LAK G +V V R ++ H+K G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRLAKAGWRVRVAVR-RPNEAMHVKPYGVVGQVEPVFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M A+ V+N +G +F+ V H A RIA IA + G + R + IS +GA
Sbjct: 63 SVRAVMNGADAVVNCVGTFDRKGRNNFDAVQHQGAARIARIAADEG-VARMVHISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TKA E A+L+ +P A I+RP+ + G ED N++A + P+ G
Sbjct: 122 PESASVYAQTKAKGERAILQAMPDAVILRPSVIFGPEDAFFNRFAGMTRFSPVLPVVG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPVYV DVA A AA+ +G + IYELGGPD+ T L E M IR V
Sbjct: 181 ETRFQPVYVDDVAHA--AAMAVEGKASPGIYELGGPDVSTFRALMEEMLGVIRRRRLIVN 238
Query: 249 VPFPVAKAVAMPREI----LLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+PF +A +A EI L VP + R D++ + D +VS+ A F DLGI
Sbjct: 239 IPFRMATIMAGAMEIGETLSLGLVPPQITR------DQVRSLRVDNVVSEGARGFADLGI 292
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + +YL +R G
Sbjct: 293 KPTATEAVLPDYLWRFRPAG 312
>gi|56756627|gb|AAW26486.1| SJCHGC05906 protein [Schistosoma japonicum]
Length = 394
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 182/340 (53%), Gaps = 40/340 (11%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++G++ TVFG TG+LGR ++ LAK G+Q++VP+R R +K++GDLGQI+ + +N
Sbjct: 51 FNGMVVTVFGATGYLGRVLMTHLAKTGTQIIVPYRCDPHMIRGMKVVGDLGQILFLPYNL 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+DD ++ M ++VVINLIG E++TRN++ E+V+ A RIA I+KE G+ + + +S
Sbjct: 111 KDDECLRKAMKYSDVVINLIGTEFDTRNFTIEEVHIDAACRIAKISKE-IGVEQLVHVSA 169
Query: 125 LGASSS------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKK 178
L + + PSR +KA EE VLRE P ATI RPA + G DR L +A ++
Sbjct: 170 LCQNKNPQKYVRKPSRFMISKAIGEEEVLRERPDATIFRPAEIWGPLDRFLCYFASKPRR 229
Query: 179 FN-----FFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHEL 232
N F PL+ G I QPVYV D+A + L + S+G+IYE GP + + ++
Sbjct: 230 HNGIQTVFVPLWSYGEHTIKQPVYVGDIARGIINCLHNP-ESLGQIYEAVGPHRYRLDDI 288
Query: 233 AELMYDTIREYPHYVKVPFPVAKAVAMPREI-LLKKVPFPLPRPGLF-NLDEINAY---- 286
+ +Y R +P EI ++ P+ L R ++ NL IN Y
Sbjct: 289 VKWIYLICR----------------YLPSEIYIIPMNPWFLARTYIYENLGRINPYLTFE 332
Query: 287 ----TSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRK 322
S T + T DL + KL+ + +R+
Sbjct: 333 RLERESATDILSGCPTLDDLNVKLTKLEDRINHIVYLFRR 372
>gi|226482528|emb|CAX73863.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Schistosoma
japonicum]
Length = 394
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 182/340 (53%), Gaps = 40/340 (11%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++G++ TVFG TG+LGR ++ LAK G+Q++VP+R R +K++GDLGQI+ + +N
Sbjct: 51 FNGMVVTVFGATGYLGRVLMTHLAKTGTQIIVPYRCDPHMIRGMKVVGDLGQILFLPYNL 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+DD ++ M ++VVINLIG E++TRN++ E+V+ A RIA I+KE G+ + + +S
Sbjct: 111 KDDECLRKAMKYSDVVINLIGTEFDTRNFTIEEVHIDAACRIAKISKE-IGVEQLVHVSA 169
Query: 125 LGASSS------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKK 178
L + + PSR +KA EE VLRE P ATI RPA + G DR L +A ++
Sbjct: 170 LCQNKNPQKYVRKPSRFMISKAIGEEEVLRERPDATIFRPAEIWGPLDRFLCYFASKPRR 229
Query: 179 FN-----FFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHEL 232
N F PL+ G I QPVYV D+A + L + S+G+IYE GP + + ++
Sbjct: 230 HNGIQTVFVPLWSYGEHTIKQPVYVGDIARGIINCLHNP-ESLGQIYEAVGPHRYRLDDI 288
Query: 233 AELMYDTIREYPHYVKVPFPVAKAVAMPREI-LLKKVPFPLPRPGLF-NLDEINAY---- 286
+ +Y R +P EI ++ P+ L R ++ NL IN Y
Sbjct: 289 VKWIYLICR----------------YLPSEIYIIPMNPWFLARTYIYENLGRINPYLTFE 332
Query: 287 ----TSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRK 322
S T + T DL + KL+ + +R+
Sbjct: 333 RLERESATDILSGCPTLDDLNVKLTKLEDRINHIVYLFRR 372
>gi|322700667|gb|EFY92421.1| NADH-ubiquinone oxidoreductase 40 kDa subunit-like protein
[Metarhizium acridum CQMa 102]
Length = 393
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 178/333 (53%), Gaps = 33/333 (9%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V+VPFR E RHLK+ GDLG++V ++++ R+
Sbjct: 48 GHTATVFGATGQLGRYIVNRLARQGCTVVVPFRE-EMTKRHLKVTGDLGRVVFVEYDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYET------------------RNYSFEDVNHFMAERIAG 108
+I+A++ ++VV NLIGR+Y T RN+S DV+ ERI
Sbjct: 107 TPSIEASVRHSDVVYNLIGRDYPTKCVANHQSHVIRIAKPWIRNFSLNDVHVEGTERIVE 166
Query: 109 IAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRL 168
++ + R+I +S A+ S S ++TKA E+ R P AT++RPA M G ED L
Sbjct: 167 AVAKYD-VDRYIHVSSHSANLQSASEFYATKARGEQVARRIFPEATLVRPAPMFGFEDNL 225
Query: 169 LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFT 228
L K A + F + + PV+ +DV AA+ L DD T+ G+ +EL GP ++
Sbjct: 226 LLKLASVLNLFT----ANNMQEKFWPVHSIDVGAALEKMLYDDSTA-GQTFELYGPKEYS 280
Query: 229 VHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS 288
+ ++A ++ I + ++ VP + K++A +L K + + DE+
Sbjct: 281 MRQIATMVDKEIYKQRRHINVPKRILKSIAG----MLNKTLW----WHTMSADEVEREFM 332
Query: 289 DTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYR 321
D ++ A TF+DLGI P + + YL +R
Sbjct: 333 DQVIDPTAKTFKDLGIEPGDIANFTYHYLQGFR 365
>gi|402218577|gb|EJT98653.1| NADP-binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 375
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 171/316 (54%), Gaps = 17/316 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG TVFG +GFLGRY+V +LAK GS V++P+R + D RHL++ GDLG +V ++++ R
Sbjct: 46 SGHTITVFGASGFLGRYIVSKLAKSGSSVVIPYRD-DYDIRHLRVSGDLGAVVQLEWDLR 104
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ I + ++ V NL+G +YET+N+ ++DV+ A RIA IA+E+ + RF+Q+S L
Sbjct: 105 NEQQIAECLRHSDTVYNLVGLDYETKNFKWKDVHVDGAARIARIAREN-NVARFVQVSHL 163
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS +S S + K E+AVL E P A I+RP+AM G EDR LN+ + F F
Sbjct: 164 NASPTSTSHYYRAKYEGEQAVLGEFPDAVIVRPSAMYGHEDRFLNQLGFWDMTFK----F 219
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
T+++PV+V+DVA + L D L GP +T EL L
Sbjct: 220 NGEQTKVRPVHVIDVAEILYRML-DMPVLPSNPVNLPGPTTYTHEELLNLARRVTDNPYR 278
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ +P +AK + IL + +P F+ DEI D + D + GI
Sbjct: 279 SIAIPKSIAKFTS---NILQYAIWWP-----WFSPDEIERRCIDEL--DVEGDWDKFGIT 328
Query: 306 PHKLKGYPTEYLIWYR 321
P +L+ YL +R
Sbjct: 329 PTELEDVAIAYLRRFR 344
>gi|424909231|ref|ZP_18332608.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845262|gb|EJA97784.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 326
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 172/321 (53%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI + N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRLLAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFAQANLRYRD 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G E+ +F+ V F A+ IA A++ G + IS +GA
Sbjct: 68 SIVKAVEDADHVVNCVGILTESGRNTFDAVQEFGAKAIAEAARDAGATL--THISAIGAE 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SS + TK AE A+ LP A I+RP+ + G ED NK+A+ + F PL G G
Sbjct: 126 ASSSTGYGRTKGRAEAAIHSVLPAAVILRPSIIFGPEDDFFNKFAKMARGMPFLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE-LMYDTIREYPHYV 247
TR QPVYV DVA AV ++ D G IYELGG D+ T + E ++ T RE P +V
Sbjct: 186 KTRFQPVYVEDVAEAVARSV-DGKLKPGAIYELGGQDVMTFRDCLEAVLAATYRERP-FV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLG 303
+PF VA + ++ PL P L + D++ D +VS N LT + +G
Sbjct: 244 NLPFGVASMIGKVASMV------PLIAPPLTS-DQVTMLKKDNVVSAEAEKNGLTLEGIG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P ++ Y++ YR G
Sbjct: 297 ITPVRVASVLPSYMVQYRPHG 317
>gi|365859001|ref|ZP_09398891.1| NAD dependent epimerase/dehydratase family protein
[Acetobacteraceae bacterium AT-5844]
gi|363713288|gb|EHL96924.1| NAD dependent epimerase/dehydratase family protein
[Acetobacteraceae bacterium AT-5844]
Length = 314
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 167/316 (52%), Gaps = 13/316 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+A VFG GF+GR VVQ+LA++ V V R E R L G +GQ+VP+ + R D
Sbjct: 6 VAVVFGGAGFIGRQVVQRLARLDYVVRVVGRNPEA-ARPLMTQGLVGQVVPLAADLRQDA 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
I +A A+VV+NL+G E++ F+ ++ + RI G A G+ R +QIS +GA
Sbjct: 65 VIGRAVAGADVVVNLVGILAESKAGDFQRLHGELPGRI-GAAAAAAGVRRLVQISAIGAD 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS +KAA E ++ P A I+RP+ + G ED N++A + F P+ G
Sbjct: 124 PASPSAYARSKAAGEASLRAAFPQAVILRPSIVFGPEDHFFNRFAGMARMLPFMPVV-CG 182
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPVYV DVA AV AA G+ YELGGP++ + +L ++ D V+
Sbjct: 183 NTRFQPVYVGDVADAVLAATSRADVE-GQTYELGGPEVVSFRDLMAMILDITGRRKRLVE 241
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P + + A E L K PL R D++ D +V+ A +LG+ PH
Sbjct: 242 IPDGLVRLQARLGEHLPGK---PLTR------DQLAQLQRDNVVAPGAKGLAELGLQPHA 292
Query: 309 LKGYPTEYLIWYRKGG 324
++ YL+ +R GG
Sbjct: 293 IRAVVPGYLMRFRPGG 308
>gi|365899768|ref|ZP_09437655.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365419500|emb|CCE10197.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 322
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 168/320 (52%), Gaps = 16/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LAK ++ V R E HL+ +G +GQI ++ N R
Sbjct: 8 LVTVFGGSGFLGRHVVRALAKRDYRIRVAVRRPEL-AGHLQPLGRVGQIHAVQANLRYPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A + ++ +INL+G E+ +F V A +A A + + +S +GA
Sbjct: 67 SVEAAIRDSHAIINLVGILTESGAQTFNAVQGEGAATVAKAAAGA--GAQLVHVSAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SPS KAA E+AVL LP ATIMRP+ + G ED N++A + F PL G G
Sbjct: 125 EESPSAYARAKAAGEKAVLTALPTATIMRPSVVFGPEDDFTNRFAGLARISPFLPLIGGG 184
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR+QPVYV DVA A+ A+ D G YELGGP++ + E+ E++ D +
Sbjct: 185 ATRMQPVYVGDVATAIADAV-DGKARAGATYELGGPEVLSFREIIEIILDITDRKRMLLS 243
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLGI 304
+PF +AK A L+ P PL D++ SD +VSD A T Q L I
Sbjct: 244 LPFGLAKFQAA----FLQFAPGPLK----LTPDQVELLRSDNVVSDAAQADGRTLQGLSI 295
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P L+ +YL +R G
Sbjct: 296 TPDSLEAVGPQYLWRFRPAG 315
>gi|192288479|ref|YP_001989084.1| NADH dehydrogenase (ubiquinone) [Rhodopseudomonas palustris TIE-1]
gi|192282228|gb|ACE98608.1| NADH dehydrogenase (ubiquinone) [Rhodopseudomonas palustris TIE-1]
Length = 321
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 171/322 (53%), Gaps = 21/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV LA+ ++ V R E HL+ +G +GQI ++ N R
Sbjct: 8 LVTVFGGSGFLGRHVVSALARRDYRIRVAVRRPEL-AGHLQPLGRVGQIHAVQANLRYPE 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M ++V INL+G E F+ V A +A A G R + IS +GA
Sbjct: 67 SVAAAMRGSHVAINLVGILAEGGAQKFDAVQGSGAATVAQAAASVGA--RMVHISAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++SP+R +KAA E+AVL +P ATI RP+ + G ED+ N++A + PL G
Sbjct: 125 ANSPARYARSKAAGEQAVLAAVPQATIFRPSVVFGPEDQFTNRFAMLARMSPVLPLVG-A 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T++QPVYV DVA A+ A+ DD G YELGGP+ T+ E+ ++ T P V
Sbjct: 184 DTKLQPVYVGDVATAIADAV-DDLAKPGATYELGGPEELTMREIMRIILQTTDRNPLLVP 242
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDL 302
+PF +A AM LL+ PG F L D++ D +VS+ A LT Q L
Sbjct: 243 LPFGLASLQAM----LLQFA------PGAFKLTPDQVRMLEVDNVVSEAAKSAGLTLQGL 292
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P L+ YL +RK G
Sbjct: 293 GIQPDSLQAIVPSYLWRFRKTG 314
>gi|50421205|ref|XP_459148.1| DEHA2D15312p [Debaryomyces hansenii CBS767]
gi|49654815|emb|CAG87319.1| DEHA2D15312p [Debaryomyces hansenii CBS767]
Length = 380
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 172/310 (55%), Gaps = 29/310 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFN 63
+G ATVFG +GFLGRY+ +LA+ G+ +VPFR DD R LK+ GDLG + ++ +
Sbjct: 49 TGYTATVFGASGFLGRYLTSKLARHGTTTVVPFR---DDMKKRFLKVTGDLGVVNFVEID 105
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R+ +I+ ++A +++V N IG +Y T+N+S DVN + ERI K+ G+ RF+ +S
Sbjct: 106 ARNLKSIQDSVAHSDIVFNCIGVDYNTKNFSMADVNIGLTERITQAVKD-AGVPRFVHVS 164
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A+ S S ++TK E+ V LP +TI+RPA M G ED LLN +K + P
Sbjct: 165 SYNANPDSKSVFYATKGVGEQVVRDILPESTIVRPAPMFGREDNLLNYLGPKLKMWT--P 222
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
+ I P++V+DVA + DD T +G+ YEL GP+ F+ HE+ ++++ + +
Sbjct: 223 --NKNAKEIYPIHVMDVARGLEKIGFDDST-LGQTYELYGPEKFSYHEIRQMIHGITQNF 279
Query: 244 PHY---------VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
++P P+AK VA ++++ K L N D+I + + +
Sbjct: 280 AQAGPLPYSFADYQIPLPLAKLVAELKQLVYWK---------LTNPDQIERHLINQTIDP 330
Query: 295 NALTFQDLGI 304
A TF+DL I
Sbjct: 331 TAKTFKDLEI 340
>gi|392378170|ref|YP_004985329.1| putative NAD-dependent epimerase/dehydratase [Azospirillum
brasilense Sp245]
gi|356879651|emb|CCD00575.1| putative NAD-dependent epimerase/dehydratase [Azospirillum
brasilense Sp245]
Length = 329
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 176/300 (58%), Gaps = 10/300 (3%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
Y + TVFG +GF+GR+++++LAK G+ V V R + LK G +GQIVPM +
Sbjct: 3 YRSEVVTVFGGSGFVGRHLIRRLAKTGAIVRVVSR-HPNKANFLKTAGSVGQIVPMAADV 61
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+DD ++ + A+ VINLIG YE ++F+ V+ RIA IAK G + R + +S
Sbjct: 62 KDDQSVARAIQGADTVINLIGTLYERGAWNFQTVHVDAPARIARIAKASG-VRRLVHVSA 120
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GA + S S +KAA E+AV + P ATI+RP+ + G ED NK+A + PL
Sbjct: 121 IGADAKSASAYAKSKAAGEQAVAQAFPGATIVRPSIVFGPEDGFFNKFAAMAQVSPALPL 180
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G GST+ QPVYV D+A A+ AA D +++G+ +ELGGP +++ EL +LM IR
Sbjct: 181 IG-GSTKFQPVYVGDLADAIAAAATLD-SAVGRTFELGGPRVYSFKELMQLMLREIRRKR 238
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
V VP+ +A+ + LL+KVP P+ P L D++ +D + + A F++LGI
Sbjct: 239 FLVPVPWNIAETLGG----LLEKVP-PIVAPPL-TRDQVEMLRTDNVAAAGAPGFKELGI 292
>gi|357627575|gb|EHJ77228.1| hypothetical protein KGM_02785 [Danaus plexippus]
Length = 395
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++G++ATVFG TGF+GRYV +L K+G+Q+++P+RG D LK+ GDLGQ++ ++
Sbjct: 50 FNGVVATVFGCTGFVGRYVCNKLGKIGTQMILPYRGDFYDAARLKVCGDLGQVLFTPYDL 109
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD+ +I+ + +NVVINL+GR+YET+N+ ++DV+ +A I++E G+ RFI +S
Sbjct: 110 RDEESIRRAVKYSNVVINLVGRDYETKNFKYKDVHVDGPRLLARISREM-GVERFIHLSY 168
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK 177
L A + SPS +K E AV E P ATI+R + + G+EDR + A +
Sbjct: 169 LNAEPNPKPLVMKSPSMFKVSKYHGELAVREEFPTATIIRASDIYGSEDRFIRSIASIWR 228
Query: 178 KFN-FFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
+ N + PL+ G T QPVYV DVA + A +D T ++Y+ GP + +H+L
Sbjct: 229 RHNRYMPLYRHGMDTVKQPVYVSDVAQGIVNAARDPDTRC-QVYQAVGPKRYLLHDLVWW 287
Query: 236 MYDTIRE 242
+ +R+
Sbjct: 288 FFRLMRK 294
>gi|440225261|ref|YP_007332352.1| NADH dehydrogenase [Rhizobium tropici CIAT 899]
gi|440036772|gb|AGB69806.1| NADH dehydrogenase [Rhizobium tropici CIAT 899]
Length = 326
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 165/320 (51%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G+LGQI ++ N R N
Sbjct: 9 LVTVFGGSGFIGRHVVRALAKRGYRIRVAVR-RPDLAGFLQPLGNLGQISIVQANVRYRN 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A V+N +G E+ +F+ V F A+ IA A+ G + IS L A
Sbjct: 68 SIDRAVEGAQHVVNCVGILAESGRNTFDAVQEFGAKAIAEAARGAGASL--THISSLSAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++SPS TKA AE A+L P A I+RP+ + G ED NK+A + F PL G G
Sbjct: 126 ANSPSAYARTKARAEAAILSIKPDAIILRPSIVFGPEDEFFNKFADMSRTAPFLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV D+A V ++ D G YELGGP++ + E E I +V
Sbjct: 186 KTKFQPVYVQDIAETVARSV-DGKLKAGTTYELGGPEVLSFRECLETTLAVINRKKSFVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + ++ PL +P + D++ SD +VS A T + +G+
Sbjct: 245 IPFGLASLIGSVASLV------PLIKPPI-TADQVTLLKSDNVVSKQAEAEGRTLKGIGL 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
+P L YL+ YR G
Sbjct: 298 LPTLLVSVLPSYLVRYRPQG 317
>gi|254453637|ref|ZP_05067074.1| NADH-ubiquinone oxidoreductase [Octadecabacter arcticus 238]
gi|198268043|gb|EDY92313.1| NADH-ubiquinone oxidoreductase [Octadecabacter arcticus 238]
Length = 325
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 170/316 (53%), Gaps = 8/316 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TV+G +GF+GRY+ ++LAK G +V V R ++ +K G +GQ+ P+ N RDD
Sbjct: 4 LVTVYGGSGFVGRYIARRLAKDGWRVRVAVRN-PNEAMFVKPYGAVGQVEPVFCNIRDDE 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++++ M ++ V+N +G E +FE V AERIA IA G + +Q+S +GA
Sbjct: 63 SVRSVMHGSDAVVNCVGVLDEIGKNTFEAVQAGGAERIARIAALMG-VRAMVQMSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TKAA E VL +P A I+RP+ + G ED N++A + P+ G
Sbjct: 122 ADSESEYARTKAAGEAGVLAHMPNAMILRPSIIFGDEDGFFNRFAGMSRFGPVLPIVG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVAAA ++ T ++ELGGP + T+ +L M IR +
Sbjct: 181 DTKFQPVYVDDVAAAAVMGVQGRATG---VFELGGPSVHTMRKLMNEMLAIIRRRRLVLN 237
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+PF A+ +A ++ + + L R G D++ D +VSD A +F+ LGI P
Sbjct: 238 IPFFAARMMAFGFKV-GRTLSLGLVR-GPITADQVKNLRIDNVVSDGAQSFEALGITPTA 295
Query: 309 LKGYPTEYLIWYRKGG 324
++ +YL +R G
Sbjct: 296 MEAVLPDYLWRFRPSG 311
>gi|335033029|ref|ZP_08526401.1| NADH-ubiquinone oxidoreductase [Agrobacterium sp. ATCC 31749]
gi|333795705|gb|EGL67030.1| NADH-ubiquinone oxidoreductase [Agrobacterium sp. ATCC 31749]
Length = 326
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 166/320 (51%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI + N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRMLAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFAQANLRYRD 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G E+ +F+ V F A+ IA A++ G + IS +GA
Sbjct: 68 SIIKAVEDADHVVNCVGILAESGRNTFDAVQEFGAKAIAEAARDAGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S + TK AE A+ LP A I+RP+ + G ED NK+A+ + F PL G G
Sbjct: 126 ANSQTGYGRTKGRAEAAIHSVLPGAVILRPSIVFGPEDDFFNKFAKMARNLPFLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV ++ D G IYELGGPD+ T + E + +V
Sbjct: 186 KTKFQPVYVEDVAEAVARSV-DGKLKPGAIYELGGPDVMTFRDCLEAVLAATYRERSFVN 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLGI 304
+PF VA + L VP P D++ D +VS N LT + +GI
Sbjct: 245 LPFGVASMIGK----LASLVPLITPP---LTPDQVTMLKKDNVVSAEAEKNGLTLEGIGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P ++ Y++ YR+ G
Sbjct: 298 TPVRVASVLPSYMVQYRQHG 317
>gi|50551529|ref|XP_503238.1| YALI0D24585p [Yarrowia lipolytica]
gi|49649106|emb|CAG81439.1| YALI0D24585p [Yarrowia lipolytica CLIB122]
Length = 375
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 168/307 (54%), Gaps = 21/307 (6%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G ATVFG GFLG Y+ +LAK G+ V+VP+R E RHLK+ GDLG + ++ + R
Sbjct: 52 TGYTATVFGANGFLGSYLTAKLAKHGTTVVVPYRE-EMAKRHLKVTGDLGVVNFLEMDLR 110
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I + +++V+NLIGREYET+N+++ DV+ A RIA K+H I R+I +S
Sbjct: 111 NLESIDEAVRHSDIVVNLIGREYETKNFNYYDVHVEGARRIAEAVKKH-NIARYIHVSAF 169
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPS TK E+ +PWATI+RPA M G ED KW F+ + P
Sbjct: 170 NAEIDSPSEFNHTKGLGEQVTKDIVPWATIVRPAPMFGRED----KW--FLDRMARSPCL 223
Query: 186 GDGST---RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
+ PV+V+DVAAA+ DD T + + +EL GP FT ++ +++ +T+R+
Sbjct: 224 VSANKFQETSNPVHVIDVAAALERICFDDST-VAQTFELYGPQKFTQKQIIDMVSETLRK 282
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
++++P KA+ + + +P P D++ + +A TF DL
Sbjct: 283 EVRHIELP----KALYQAYTKATQAIWWPTYSP-----DQVERQFLSQKIDPSAKTFNDL 333
Query: 303 GIVPHKL 309
+ P +L
Sbjct: 334 DLTPMEL 340
>gi|334318358|ref|YP_004550977.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83]
gi|384531484|ref|YP_005715572.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C]
gi|384538209|ref|YP_005722294.1| probabable NADH-ubiquinone oxidoreductase [Sinorhizobium meliloti
SM11]
gi|407722670|ref|YP_006842332.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti Rm41]
gi|333813660|gb|AEG06329.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C]
gi|334097352|gb|AEG55363.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83]
gi|336035101|gb|AEH81033.1| probabable NADH-ubiquinone oxidoreductase [Sinorhizobium meliloti
SM11]
gi|407320902|emb|CCM69506.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti Rm41]
Length = 326
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 171/321 (53%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GR+VV+ LAK G ++ V R D HL+ +G++GQI ++ N R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGHLQPLGNVGQISFVQANLRYRR 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VIN +G +E+ +FE V F A +A A+ G + IS +GA
Sbjct: 68 SVDRAVDGADHVINCVGVLFESGRNTFEAVQDFGARAVAEAARATGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S TK AE A+L LP A I+RP+ + G ED NK+A+ + PL G G
Sbjct: 126 ANSESSYARTKGRAEAAILETLPAAVILRPSIIFGPEDGFFNKFAEMARFSPVLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
+TR QPVYV DVA AV ++ DGT + G IYELGGP + + E ++M TI +V
Sbjct: 186 NTRFQPVYVTDVAEAVARSV--DGTLTGGTIYELGGPQVLSFRECLDIMLKTIDRKRSFV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +A + + VPF P D++ SD +VS A T +G
Sbjct: 244 SLPFGIASLMGS----VASLVPFITPP---LTADQVVLLKSDNVVSAKAEAEGRTLAGIG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P L+ YL+ YR G
Sbjct: 297 IEPTMLESILPTYLVRYRPHG 317
>gi|254571035|ref|XP_002492627.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032425|emb|CAY70448.1| hypothetical protein PAS_chr3_1188 [Komagataella pastoris GS115]
gi|308152242|emb|CBI83540.1| NUEM (39 kDa) subunit of mitochondrial NADH:ubiquinone
oxidoreductase (complex I) [Komagataella pastoris]
Length = 384
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 180/327 (55%), Gaps = 29/327 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G ATVFG TGFLGR VV +LAK G+ V+VPFR + R LK+ GDLG + ++F+ R
Sbjct: 38 TGFTATVFGGTGFLGRVVVSKLAKHGTNVVVPFRN-DRARRQLKVNGDLGVVNFVEFDIR 96
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I+ ++ +++VINLIG E+ ++N+S EDVN AERIA AKE G+ R I +S
Sbjct: 97 NLKSIEDSVKYSDIVINLIGTEHFSKNFSIEDVNIGAAERIAKAAKE-AGVSRLIHVSSY 155
Query: 126 GASSSSPSRVFSTKAAAEEAVLREL-PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
A+ SS S ++TK E+ V P ATI+RPA M LN+ Q +K +
Sbjct: 156 NANPSSSSDFYATKGIGEQVVRDNFGPDATIVRPAPMYFRNSPFLNELLQ-IKALGGNVI 214
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR--- 241
F + PV+ + V A+ DD T+ G+ YEL G + ++ EL E++ I
Sbjct: 215 F---KKEVYPVHALQVGEAIERIAFDDATA-GQTYELFGKERYSKKELREMIKHIIHIGQ 270
Query: 242 --EYPH----YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295
YP+ Y+ P P A A+ R+ + + PR FN+D++ + + +
Sbjct: 271 RGYYPYSAGFYLPAPEPFLYAFALIRQYISSQ-----PR---FNVDQLKRSHINQEIDQS 322
Query: 296 ALTFQDLGIVPHKLKGYPTEYLIWYRK 322
A TF DLG+VP +L +EYL Y K
Sbjct: 323 AKTFTDLGMVPDEL----SEYLYRYVK 345
>gi|114763606|ref|ZP_01443011.1| NADH ubiquinone oxidoreductase, putative [Pelagibaca bermudensis
HTCC2601]
gi|114543886|gb|EAU46898.1| NADH ubiquinone oxidoreductase, putative [Roseovarius sp. HTCC2601]
Length = 327
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 165/316 (52%), Gaps = 7/316 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK+G +V V R ++ +K G +GQ+ P+ N R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKLGWRVRVAVR-RPNEAIFVKPYGVVGQVEPVLCNIRNDE 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ M A+ V+N +G +F+ + AER+A IA E G + R +QIS +GA
Sbjct: 63 SVRMVMQGADAVVNCVGTFDARGKNNFDAIQAEGAERVARIAAEQG-VARMVQISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TK E AVL +P A I+RP+ + G ED+ N++A + PL G
Sbjct: 122 AESNSDYARTKGEGEAAVLSLMPDAVILRPSVIFGAEDQFFNRFAGMSRMGPVLPLVG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T QPVYV DVA A A + G + +YELGGPD + +L M IR V
Sbjct: 181 DTNFQPVYVDDVAQA--AVMGATGEAAPGVYELGGPDRESFRDLIGEMLSVIRRRRFIVN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+PF +A + E + + P D++ + D +VS+ A F +LGI P
Sbjct: 239 IPFGIASGMGWAFEWIQRLTGGLF--PAQITRDQVKSLRHDNVVSEGAKGFAELGITPTS 296
Query: 309 LKGYPTEYLIWYRKGG 324
L+ +YL +R G
Sbjct: 297 LEAVLPDYLWRFRPSG 312
>gi|417858675|ref|ZP_12503732.1| NADH-ubiquinone oxidoreductase [Agrobacterium tumefaciens F2]
gi|338824679|gb|EGP58646.1| NADH-ubiquinone oxidoreductase [Agrobacterium tumefaciens F2]
Length = 326
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 173/321 (53%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LA+ G ++ V R D L+ +G++GQI + N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRMLARRGYRIRVAVR-RPDLAGFLQPLGNVGQISFAQANLRYRD 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G E+ +F+ V F A+ IA ++ G + IS +GA
Sbjct: 68 SIIKAVEDADHVVNCVGILTESGRNTFDAVQEFGAKAIAEAVRDAGATL--THISAIGAE 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ SP+ TK AE A+ LP A I+RP+ + G ED NK+A+ + F PL G G
Sbjct: 126 AGSPTGYGRTKGRAEAAIHSVLPNAVILRPSIIFGPEDDFFNKFAKMARGLPFLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE-LMYDTIREYPHYV 247
+T+ QPVYV DVA AV ++ D G IYELGG D+ T + E ++ T R+ P +V
Sbjct: 186 TTKFQPVYVEDVAEAVARSV-DGKLKPGAIYELGGQDVMTFRDCLEAVLAATYRQRP-FV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLG 303
+PF +A +A ++ PL P L +D++ D +VS N LT + +G
Sbjct: 244 DLPFGIASMIAKITSMI------PLITPPL-TVDQVTMLKKDNVVSADAEKNGLTLEGIG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P ++ Y++ YR G
Sbjct: 297 ITPVRVASVLPSYMVQYRTHG 317
>gi|254292584|ref|YP_003058607.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814]
gi|254041115|gb|ACT57910.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814]
Length = 334
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 163/303 (53%), Gaps = 10/303 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG + TVFG +GF+GRY V+ L K G +V V R + +++ G++GQ+ ++ N R
Sbjct: 2 SGKLITVFGGSGFIGRYAVRALCKAGWRVRVAVRNPMN-AGDMRIGGEVGQVQIIQANVR 60
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I + A+ V+NL+G Y+ +F+ A+ IA A + GI +FIQ+S +
Sbjct: 61 NRPSIVRALDGADAVLNLVGLLYQKGRNTFDGTQALGAQNIAEYAAD-AGIKQFIQLSAI 119
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA S + TKA AE+ VL ++P ATI+RP+ + G ED+ NK+A F K F PL
Sbjct: 120 GADLESNANYARTKAEAEQTVLDQIPTATILRPSLVFGPEDQFFNKFATFAKFLPFLPLV 179
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G T+ QPV+V D+A A+ AL T G+ YE+GGP +T EL E + +
Sbjct: 180 GGGKTKFQPVFVGDLADAIVNALSIPETQ-GRTYEIGGPRTYTFKELLEFITEQTDRKKT 238
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQD 301
+ +PF A+ + L K PF P D++ SD IV N T +D
Sbjct: 239 LLPIPFFAAELKGLVFAGLFKFWPFHAPP---ITRDQVRMLKSDNIVGLETDKNFGTIED 295
Query: 302 LGI 304
LG+
Sbjct: 296 LGV 298
>gi|114327366|ref|YP_744523.1| NADH-ubiquinone oxidoreductase 39-40 kDa subunit-like protein
[Granulibacter bethesdensis CGDNIH1]
gi|114315540|gb|ABI61600.1| NADH-ubiquinone oxidoreductase 39-40 kDa subunit-like protein
[Granulibacter bethesdensis CGDNIH1]
Length = 333
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 176/325 (54%), Gaps = 24/325 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPM-- 60
+G IATVFG +GFLG+ +++ LA+ G QV VP R DP LK G +GQIVP+
Sbjct: 15 AGRIATVFGGSGFLGQSLIRLLAREGYQVRVPVR----DPEQVLKLKSAGSVGQIVPLGV 70
Query: 61 KFNPRD-DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRF 119
RD + I + A++V+NL+G E R F+ V+ A IA ++ + G++ F
Sbjct: 71 SLGSRDAEAGIARAVQGASLVVNLVGLLAEARKGDFQRVHVQAAGLIASLSAQ-AGVLSF 129
Query: 120 IQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKF 179
+ IS LGA +SPS +KA EEAV +P A I+RP+ + G ED N++A
Sbjct: 130 MHISALGADPASPSAYGRSKAEGEEAVRSAVPQAAILRPSVVFGAEDHFFNRFAAMAVSL 189
Query: 180 NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
P+ G++R+QPVYV DVA A+ AA + G + ELGGP++ T+ ++ +
Sbjct: 190 PVVPVI-YGNSRMQPVYVEDVARAILAAAT---QAAGNVIELGGPEVLTMRDIQHRILTM 245
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299
I + +P VA A+AM + +K+P RP D++ S ++VS ALT
Sbjct: 246 IGRKKPLIDIPDKVAMALAM----IAEKMPG---RP--LTTDQLAMLGSGSVVSPQALTL 296
Query: 300 QDLGIVPHKLKGYPTEYLIWYRKGG 324
+ LGIVP + YL +R GG
Sbjct: 297 ETLGIVPTPIDLVVPHYLSRFRAGG 321
>gi|407772836|ref|ZP_11120138.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Thalassospira
profundimaris WP0211]
gi|407284789|gb|EKF10305.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Thalassospira
profundimaris WP0211]
Length = 335
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 174/337 (51%), Gaps = 33/337 (9%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
I TVFG TGF+GR++V++L + V VP R E + LK MG+LGQ+VP+ + RD++
Sbjct: 5 IVTVFGGTGFVGRHIVKRLLERDFIVRVPTRSFER-VKKLKPMGNLGQVVPVHCDVRDED 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+IK + + VINL+G YE + +F +++ A+RIA AK G+ + +S LG
Sbjct: 64 SIKGALEGSEAVINLLGILYERGSKNFLNIHVKAAKRIAEEAKA-AGVKTLLHMSALGVD 122
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP----- 183
++ + ++K A E+AV P A I RP+ + G D LNK+A + P
Sbjct: 123 KNTSANYATSKLAGEKAVREAFPDAVIFRPSVIFGPNDNFLNKFATMARFSPMLPVVGAP 182
Query: 184 -------------LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVH 230
L G+G + QPVYV DVA A AL +G S GK YELGGP+ ++
Sbjct: 183 GLPKVDLGEGKVDLHGEGGPKFQPVYVGDVADAFVTALM-EGKSAGKTYELGGPETYSFM 241
Query: 231 ELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDT 290
L + M R+ + VPF +A A L+ +P P P D++ +D
Sbjct: 242 ALLQDMLRITRQRAILMPVPFWLASIKAF----FLQFLPVPPLTP-----DQVRLLKTDN 292
Query: 291 IVSDNALTFQDLGIVPHKLKGYPTEYLIWY---RKGG 324
+VS+ A F +LGI P+ L+ YL + RK G
Sbjct: 293 VVSEGADGFAELGITPNSLEAIAPSYLKRFCPPRKSG 329
>gi|315499090|ref|YP_004087894.1| nad-dependent epimerase/dehydratase [Asticcacaulis excentricus CB
48]
gi|315417102|gb|ADU13743.1| NAD-dependent epimerase/dehydratase [Asticcacaulis excentricus CB
48]
Length = 321
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 176/323 (54%), Gaps = 17/323 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKF 62
S + TVFG +GF+G+ VV+ LA+ G +V V R P + LK +G +GQI ++
Sbjct: 5 SSRLVTVFGGSGFVGKQVVRALAQKGWRVRVAVR----KPTYAYDLKPLGTVGQIQVVRC 60
Query: 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIA-GIAKEHGGIMRFIQ 121
+ R ++ ++A ++ A+ V+NL+G Y+T SF+ V+ ++ IA G AK G+ F+Q
Sbjct: 61 DVRKESDVQAALSGASAVVNLVGILYQTPGASFDAVHRAASKAIAEGAAKR--GVSDFVQ 118
Query: 122 ISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF 181
+S LGA S S+ STK AEEAV +P A I+RP+ + G +D A+ +K F
Sbjct: 119 MSALGADPKSSSKYASTKGKAEEAVRAAIPSAVIVRPSVIFGPQDGFFTGLAEQIKTFPV 178
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
P G G T+ QPVYV DVA A+ L + + G+ +ELGGP+ FT ++L + + + I+
Sbjct: 179 MPSIGGGKTKFQPVYVGDVARAIADTLGNPAFA-GQTFELGGPETFTFNDLIKYVSEEIQ 237
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
V +PF A + L+ V L +P L D++ D + S ++
Sbjct: 238 SPRALVWMPFAAASLIG-----LVGDVSSLLIKP-LLTSDQVLLLQKDNVASGKLPGLRE 291
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
LGIVP ++ YL +RK G
Sbjct: 292 LGIVPTAVESVVPSYLWRFRKNG 314
>gi|398389741|ref|XP_003848331.1| hypothetical protein MYCGRDRAFT_50126 [Zymoseptoria tritici IPO323]
gi|339468206|gb|EGP83307.1| hypothetical protein MYCGRDRAFT_50126 [Zymoseptoria tritici IPO323]
Length = 383
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 175/315 (55%), Gaps = 15/315 (4%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G TVFG TGF+GRY+V +LA+ G+ +++P+R E RHLK+ GDLG++ ++++ R+
Sbjct: 56 GHTVTVFGATGFVGRYIVNRLAQAGNTIVIPYRE-EMAKRHLKVTGDLGRVNFIEYDLRN 114
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NL+GR+Y T+N+ EDV+ RIA ++ + RFIQ+S
Sbjct: 115 TASIEESVRHSDIVFNLVGRDYPTKNFDLEDVHVEGTHRIATAVAKY-DVDRFIQMSSHS 173
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
SPS F TK E+ P TI+RP+ + G EDRLL++ A+
Sbjct: 174 VHPESPSEFFRTKWRGEQVAREIFPETTIVRPSPVFGFEDRLLHRLARATNVLT----SN 229
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ + R +P++ VD+ A+ A DD T+ G+ +EL GP +++ E++ L+ I +
Sbjct: 230 NMTERFRPIHSVDLGRALEAIAMDDSTA-GQTFELYGPKEYSMGEISALVDREIFHKRRH 288
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP KA+ P ++ K+ + + + DE+ D + NA TF DLG+ P
Sbjct: 289 INVP----KAILGPAMGVMNKLLW----WSVGSKDEVEREHLDQFIDKNAKTFADLGMEP 340
Query: 307 HKLKGYPTEYLIWYR 321
+ + +YL YR
Sbjct: 341 GDIANFTYKYLQGYR 355
>gi|146278809|ref|YP_001168968.1| NADH dehydrogenase [Rhodobacter sphaeroides ATCC 17025]
gi|145557050|gb|ABP71663.1| NADH dehydrogenase [Rhodobacter sphaeroides ATCC 17025]
Length = 328
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 168/316 (53%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++A+ G +V V R ++ +K G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAQQGWRVRVAVR-RPNEALFVKPYGVVGQVEPVFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M A+ V+N +G E F+ V A R+A +A G + +QIS +GA
Sbjct: 63 SVRAVMHGADAVVNCVGILAEAGKNRFQSVQAEGAARVARLAAAEG-VQALVQISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ SPS +KAA E AVL+ P A I+RP+ + G ED N++A+ + P+ G G
Sbjct: 122 ADSPSAYARSKAAGEAAVLQAFPRAVILRPSVIFGPEDDFFNRFARMARFSPVLPVVG-G 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPV+V DVA A A + G + IYELGGPD + L +++ I V
Sbjct: 181 ETRFQPVFVDDVAQAAVAGVL--GRAAPGIYELGGPDAESFRALMQMLLRVIERRKMIVN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
VPF VA+ +A + LL+ V L D++ D +VS A DLGI P
Sbjct: 239 VPFGVARLMAATLD-LLQTVTLGLLANKTLTRDQVRNLARDNVVSPGARGLADLGISPTA 297
Query: 309 LKGYPTEYLIWYRKGG 324
++ EYL YR G
Sbjct: 298 MEAVLPEYLWSYRPSG 313
>gi|448083542|ref|XP_004195382.1| Piso0_004769 [Millerozyma farinosa CBS 7064]
gi|359376804|emb|CCE85187.1| Piso0_004769 [Millerozyma farinosa CBS 7064]
Length = 380
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 172/310 (55%), Gaps = 29/310 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFN 63
+G ATVFG +GFLGRY+ +LAK G+ +VP+R DD R LK+ GDLG + ++F+
Sbjct: 49 TGYTATVFGASGFLGRYLSSKLAKHGTITIVPYR---DDMKKRFLKVAGDLGVVNFVEFD 105
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R+ +I+ ++A +++V N IG +Y T+N+S DVN + ERIA + KE G RF+ +S
Sbjct: 106 SRNLKSIQDSVAHSDIVFNCIGVDYNTKNFSMADVNIGITERIAQVVKETGN-PRFVHVS 164
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A+ S S ++TK E V +P ATI+RPA M G ED LLN A +K + P
Sbjct: 165 SYNANPESESVYYATKGIGENIVRDLVPDATIVRPAPMYGREDNLLNYLAPKIKMWT--P 222
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
I PV+V+DVA A+ DD T +G+ YEL GP+ T E+ ++++ + +
Sbjct: 223 --NKNGKEIYPVHVLDVAKALEKIGYDDST-VGQTYELYGPEKLTYLEIRQMIHGITQNF 279
Query: 244 PHY---------VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
++P +AK VA ++ LP L N D+I + + +
Sbjct: 280 AQAGPFAYKFADYEIPLWLAKIVADVKQ---------LPYWKLTNSDQIQRHVINQNIDG 330
Query: 295 NALTFQDLGI 304
+A TF+DLGI
Sbjct: 331 SAKTFKDLGI 340
>gi|402819924|ref|ZP_10869491.1| hypothetical protein IMCC14465_07250 [alpha proteobacterium
IMCC14465]
gi|402510667|gb|EJW20929.1| hypothetical protein IMCC14465_07250 [alpha proteobacterium
IMCC14465]
Length = 313
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 161/313 (51%), Gaps = 12/313 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR++V+ L K G +V V R ++ LK G +GQ+ M+ N RD+
Sbjct: 11 VVTVFGGSGFLGRHIVRALVKRGWRVRVAVRR-PNEALFLKTAGAVGQVAIMQANIRDEA 69
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + + VINL+G YE+ F V A +A A G + +F+Q+S +GAS
Sbjct: 70 SVRKAVKGVDAVINLVGILYESGKQKFSAVQADGARTVADAAASEG-VQKFVQLSAIGAS 128
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S + +KAA E AVL +P A I+RP+ +IG ED N++A+ PL G G
Sbjct: 129 FESDAAYARSKAAGEAAVLEAIPQAVILRPSIVIGPEDDFFNRFAKMATLAPALPLVGGG 188
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T QPV V DVA AV A L+D GK YELGGPDIF+ L E+M +
Sbjct: 189 ETLYQPVAVQDVAQAVCATLEDKDCG-GKTYELGGPDIFSFKNLMEIMLRHTGQKRILAP 247
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+PF A+ L+ + LP P L D++ SD I + +L I P
Sbjct: 248 LPFFAAQ--------LISRFTQFLPNPPL-TPDQVVMLRSDNIADEKLPGLGELDIAPTP 298
Query: 309 LKGYPTEYLIWYR 321
++ YL ++
Sbjct: 299 IEAVLPHYLSRFK 311
>gi|426371295|ref|XP_004065497.1| PREDICTED: LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1
alpha subcomplex subunit 9, mitochondrial [Gorilla
gorilla gorilla]
Length = 424
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/240 (42%), Positives = 148/240 (61%), Gaps = 11/240 (4%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 92 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 151
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSF-------EDVNHFMAERIAGIAKEHGGIMR 118
D ++I+ + +NVVINLIGR++ET+ S EDV + + IA ++KE G+ +
Sbjct: 152 DKDSIRRVVQHSNVVINLIGRDWETKTXSILDFXFDFEDVFVKIPQAIAQLSKE-AGVEK 210
Query: 119 FIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKK 178
FI +S L A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +
Sbjct: 211 FIHVSHLNANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHR 269
Query: 179 FNFFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
F PL G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 270 FGPIPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 328
>gi|254437076|ref|ZP_05050570.1| 3-beta hydroxysteroid dehydrogenase/isomerase family
[Octadecabacter antarcticus 307]
gi|198252522|gb|EDY76836.1| 3-beta hydroxysteroid dehydrogenase/isomerase family
[Octadecabacter antarcticus 307]
Length = 325
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 172/316 (54%), Gaps = 8/316 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ V+G +GF+GRY+ ++LAK G +V V R ++ +K G +GQ+ P+ N RDD+
Sbjct: 4 LVIVYGGSGFVGRYIARRLAKDGWRVRVAVRN-PNEAMFVKPYGAVGQVEPVFCNIRDDD 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++++ M A+ V+N +G E +FE V AERIA IA G + +Q+S +GA
Sbjct: 63 SVRSVMHGADAVVNCVGVLDEIGKNTFEAVQASGAERIARIAASTG-VGAMVQMSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TKAA E VL +P A I+RP+ + G ED N++A + P+ G
Sbjct: 122 AESESEYARTKAAGEAGVLAHMPNAMILRPSIIFGDEDGFFNRFAGMSRFGPVLPIVG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVAAA ++ G + G ++ELGGPD+ T+ EL M IR +
Sbjct: 181 DTKFQPVYVDDVAAAAVIGVQ--GRAQG-VFELGGPDVQTMRELMTGMLAIIRRRRLVLN 237
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+PF A+ +A ++ + + L R G D++ D +VS+ A F+ LGI P
Sbjct: 238 IPFFAAQMMAFGFKV-GRTLSLGLVR-GPITADQVKNLRMDNVVSEGAQGFEALGITPTA 295
Query: 309 LKGYPTEYLIWYRKGG 324
++ +YL +R G
Sbjct: 296 METILPDYLWRFRPSG 311
>gi|260792074|ref|XP_002591052.1| hypothetical protein BRAFLDRAFT_119073 [Branchiostoma floridae]
gi|229276252|gb|EEN47063.1| hypothetical protein BRAFLDRAFT_119073 [Branchiostoma floridae]
Length = 479
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 161/287 (56%), Gaps = 17/287 (5%)
Query: 28 AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87
+ GSQ++VP R + +L+ MGDLGQIV + + RD + + + +NVVIN+IGR+
Sbjct: 178 GRDGSQIVVPHRCDWYNTLYLRPMGDLGQIVFSELDERDPESYRKMLKHSNVVINMIGRD 237
Query: 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVL 147
+ETRN+ FE+VN +A IA + KE G+ R I +S L A +SPS+++ TK EEAV
Sbjct: 238 WETRNFKFEEVNIDLARTIAQLCKEE-GVERLIHVSSLNADPNSPSKLYRTKFEGEEAVK 296
Query: 148 RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRI-QPVYVVDVAAAVTA 206
P ATI+RPA M G EDR LN +A ++ F PL G I QPVYV DVA A+
Sbjct: 297 EAFPDATILRPAQMFGREDRFLNYYAN-LRAFGGVPLISRGRKTIRQPVYVGDVATAIIN 355
Query: 207 ALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLK 266
A K+ + GK +EL GP+ + ++++ E +Y + P P+P + R LK
Sbjct: 356 AAKER-DAKGKTFELVGPNRYYLYDMVEYIYRVMHRTP--FIYPYPKFLYMLAARFGELK 412
Query: 267 KVPFPLPRPGLFNLDEI--NAYTSDTIVSDNALTFQDLGIVPHKLKG 311
P L D++ + +T +T V L +DLG+ P L+
Sbjct: 413 WRP-------LLTRDQVIRDHHTDETTVGVPGL--EDLGVTPTSLEA 450
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR 39
+SGI ATVFG TGFLGRYV+ +L + GSQ++VP R
Sbjct: 52 FSGICATVFGGTGFLGRYVINKLGRDGSQIVVPHR 86
>gi|159184245|ref|NP_353326.2| NADH-ubiquinone oxidoreductase [Agrobacterium fabrum str. C58]
gi|159139572|gb|AAK86111.2| NADH-ubiquinone oxidoreductase [Agrobacterium fabrum str. C58]
Length = 326
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 166/320 (51%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI + N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRMLAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFAQANLRYRD 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G E+ +F+ V F A+ IA A++ G + IS +GA
Sbjct: 68 SIIKAVEDADHVVNCVGILAESGRNTFDAVQEFGAKAIAEAARDTGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S + TK AE A+ LP A I+RP+ + G ED NK+A+ + F PL G G
Sbjct: 126 ANSQTGYGRTKGRAEAAIHSVLPGAVILRPSIIFGPEDDFFNKFAKMARNLPFLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV ++ D G IYELGGPD+ T + E + +V
Sbjct: 186 KTKFQPVYVEDVAEAVARSV-DGKLKPGAIYELGGPDVMTFRDCLEAVLAATYRERSFVN 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF VA + L VP P D++ D +VS A LT + +GI
Sbjct: 245 LPFGVASMIGK----LASLVPLITPP---LTPDQVTMLKKDNVVSAEAEKKGLTLEGIGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P ++ Y++ YR+ G
Sbjct: 298 TPVRVASVLPSYMVQYRQHG 317
>gi|418407824|ref|ZP_12981141.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Agrobacterium
tumefaciens 5A]
gi|358005810|gb|EHJ98135.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Agrobacterium
tumefaciens 5A]
Length = 326
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 171/321 (53%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI + N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRMLAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFAQANLRYRD 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G E+ +F+ V F A+ IA A+ G + IS +GA
Sbjct: 68 SIVKAIEDADHVVNCVGILAESGRNTFDAVQEFGAKAIAEAARNAGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S + TK AE A+ LP A I+RP+ + G ED NK+A+ + F PL G G
Sbjct: 126 ANSSTGYGRTKGRAEAAIHSVLPGAVILRPSIIFGPEDDFFNKFAKMARSLPFLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE-LMYDTIREYPHYV 247
T+ QPVYV DVA AV ++ D G IYELGG D+ T + E ++ T R+ P +V
Sbjct: 186 KTKFQPVYVEDVAEAVARSV-DGKLKPGAIYELGGQDVMTFRDCLEAVLAATYRQRP-FV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLG 303
+PF VA + ++ PL P L +D++ D +VS N LT + +G
Sbjct: 244 NLPFGVASMIGKIASLV------PLITPPL-TVDQVTMLKKDNVVSADAEKNGLTLEGIG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P ++ Y++ YR G
Sbjct: 297 ITPVRVASVLPSYMVHYRPHG 317
>gi|418401515|ref|ZP_12975042.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti
CCNWSX0020]
gi|359504474|gb|EHK77009.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti
CCNWSX0020]
Length = 326
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 168/320 (52%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GR+VV+ LAK G ++ V R D HL+ +G++GQI + N R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGHLQPLGNVGQISFSQANLRYRR 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VIN +G +E+ +FE V F A +A A+ G + IS +GA
Sbjct: 68 SVDRAVDGADHVINCVGVLFESGRNTFEAVQDFGARAVAEAARATGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S TK AE A+L LP A I+RP+ + G ED NK+A+ + PL G G
Sbjct: 126 ANSESSYARTKGRAEAAILETLPAAVILRPSIIFGPEDGFFNKFAEMARFSPVLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPVYV DVA AV ++ D + G IYELGGP + + E ++M TI +V
Sbjct: 186 NTRFQPVYVTDVAEAVARSV-DGKLTGGTIYELGGPQVLSFRECLDIMLKTIDRKRSFVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + VPF P D++ SD +VS A T +GI
Sbjct: 245 LPFGIASLMGS----VASLVPFITPP---LTADQVVLLKSDNVVSAKAEAEGRTLAGIGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P L+ YL+ YR G
Sbjct: 298 EPTMLESILPTYLVRYRPHG 317
>gi|328353367|emb|CCA39765.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Komagataella
pastoris CBS 7435]
Length = 757
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 180/327 (55%), Gaps = 29/327 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G ATVFG TGFLGR VV +LAK G+ V+VPFR + R LK+ GDLG + ++F+ R
Sbjct: 411 TGFTATVFGGTGFLGRVVVSKLAKHGTNVVVPFRN-DRARRQLKVNGDLGVVNFVEFDIR 469
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I+ ++ +++VINLIG E+ ++N+S EDVN AERIA AKE G+ R I +S
Sbjct: 470 NLKSIEDSVKYSDIVINLIGTEHFSKNFSIEDVNIGAAERIAKAAKE-AGVSRLIHVSSY 528
Query: 126 GASSSSPSRVFSTKAAAEEAVLREL-PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
A+ SS S ++TK E+ V P ATI+RPA M LN+ Q +K +
Sbjct: 529 NANPSSSSDFYATKGIGEQVVRDNFGPDATIVRPAPMYFRNSPFLNELLQ-IKALGGNVI 587
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR--- 241
F + PV+ + V A+ DD T+ G+ YEL G + ++ EL E++ I
Sbjct: 588 F---KKEVYPVHALQVGEAIERIAFDDATA-GQTYELFGKERYSKKELREMIKHIIHIGQ 643
Query: 242 --EYPH----YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295
YP+ Y+ P P A A+ R+ + + PR FN+D++ + + +
Sbjct: 644 RGYYPYSAGFYLPAPEPFLYAFALIRQYISSQ-----PR---FNVDQLKRSHINQEIDQS 695
Query: 296 ALTFQDLGIVPHKLKGYPTEYLIWYRK 322
A TF DLG+VP +L +EYL Y K
Sbjct: 696 AKTFTDLGMVPDEL----SEYLYRYVK 718
>gi|254511553|ref|ZP_05123620.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodobacteraceae
bacterium KLH11]
gi|221535264|gb|EEE38252.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodobacteraceae
bacterium KLH11]
Length = 327
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 170/318 (53%), Gaps = 10/318 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++A G +V V R ++ ++ G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMASEGWRVRVAVR-RPNEAMFVRPYGVVGQVEPILCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M A+ V+N +G E F V AERIA +A G I R + IS +GA
Sbjct: 63 SVAAAMQGADAVVNCVGVLNEIGKNEFGAVQAEGAERIARLAATQG-IARMVHISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TKA E VL+ +P A I+RP+ + GTED+ N++A + F PL G
Sbjct: 122 PGSDSDYARTKAQGEAGVLQHMPGAVILRPSVIFGTEDQFFNRFAGMARMSPFLPLVG-A 180
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
TR QPV+V DVA AAV L G ++ +YELGGP++ T L + M I +
Sbjct: 181 DTRFQPVHVDDVAQAAVQGVL---GRAVAGVYELGGPEVQTFRALMQQMLGVIYRRRIII 237
Query: 248 KVPFPVAKAVAMPREILLKKVPFPL-PRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+P +A+ +A +I K + F L P P + D++ D +V++ A F DLGI P
Sbjct: 238 GIPLWMARIMAGVLDI-AKFISFQLFPNP-ILTRDQVKNLRRDNVVAEGAKGFADLGIEP 295
Query: 307 HKLKGYPTEYLIWYRKGG 324
L+ EYL +R G
Sbjct: 296 VTLEAVLPEYLWKFRPSG 313
>gi|220920414|ref|YP_002495715.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS
2060]
gi|219945020|gb|ACL55412.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS
2060]
Length = 381
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 165/320 (51%), Gaps = 9/320 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LAK G ++ V R D + L+ +G +GQIV ++ N RD
Sbjct: 14 LVTVFGGSGFLGRHVVRALAKRGYRIRVAVR-RPDLAQFLQPLGRVGQIVAVQANLRDAA 72
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+VVINL+G E+ N SF+ + A +A A G R I +S +GA
Sbjct: 73 SVTRAVEHADVVINLVGILQESGNQSFQRLQADGAGLVARAATAIGA--RMIHVSAIGAD 130
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SPS TKAA E VL P A I RP+ + G D N++A + PL G G
Sbjct: 131 PESPSAYARTKAAGEAKVLAACPEAVIFRPSIIFGPGDSFFNRFAGLARLMPVLPLAGAG 190
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR+QPV+V DVA A+ + D G IYELGGP+I T+ +L E + +
Sbjct: 191 -TRMQPVFVGDVAEAIARTV-DGKAKPGTIYELGGPEILTLQQLVEYTLQVTKRRRIVLP 248
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+P P A+ A EI LP D++ D +VS+ A +F+ LG+
Sbjct: 249 LPGPAARLQARALEIADTLTLGLLPDSLKLTRDQVILLERDNVVSEAAKAEGRSFEALGL 308
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
VP ++ YL +RK G
Sbjct: 309 VPTAVEAVVPGYLWRFRKAG 328
>gi|150398722|ref|YP_001329189.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium medicae WSM419]
gi|150030237|gb|ABR62354.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium medicae WSM419]
Length = 326
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 169/320 (52%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GR+VV+ LAK G ++ V R D HL+ +G++GQI ++ N R N
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGHLQPLGNVGQISFVQANLRYRN 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VIN +G +E +F+ V F A +A A+ G + IS +GA
Sbjct: 68 SVDRAVDGADHVINCVGVLFENGRNTFDAVQDFGARAVAEAARATGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TK AE A+L LP A I+RP+ + G ED NK+A+ + PL G G
Sbjct: 126 ARSDSSYARTKGRAEAAILEILPTAVILRPSIIFGPEDGFFNKFAEMARFSPVLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPVYV DVA AV ++ D + G IYELGGP + + E ++M TI +V
Sbjct: 186 NTRFQPVYVTDVAEAVARSV-DGKLAGGTIYELGGPQVLSFRECLDIMLKTIDRKRSFVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + VPF P D++ SD +VS A TF +GI
Sbjct: 245 LPFGIASLMGS----VASLVPFIEPP---LTADQVVLLKSDNVVSAMAETEGRTFAGIGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P L+ YL+ YR G
Sbjct: 298 EPTMLESILPTYLVRYRPHG 317
>gi|222084594|ref|YP_002543123.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Agrobacterium radiobacter K84]
gi|398382153|ref|ZP_10540251.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
AP16]
gi|221722042|gb|ACM25198.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Agrobacterium radiobacter K84]
gi|397718021|gb|EJK78616.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
AP16]
Length = 326
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 165/320 (51%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D +L+ G+LGQI ++ N R N
Sbjct: 9 LVTVFGGSGFIGRHVVRALAKRGYRIRVAVR-RPDLAGYLQPQGNLGQISIVQANLRYRN 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A V+N +G E+ +F+ V F A+ IA A+ G + +S LGA+
Sbjct: 68 SIDRAVEGAQHVVNCVGILAESGRNTFDAVQEFGAKAIAEAARGVGASL--THVSALGAN 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++SPS TK AE A+ P A I+RP+ + G ED NK+A + F PL G G
Sbjct: 126 ANSPSAYARTKGRAEAAIFSIKPDAVILRPSIVFGPEDGFFNKFADMSRSAPFLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV + D G IYELGGP++ + E E I V
Sbjct: 186 KTKFQPVYVEDVAEAVARGV-DGKLKAGTIYELGGPEVLSFRECLETTLAVINRKKPLVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + ++ PL P + + D++ SD +VS A T + +G+
Sbjct: 245 IPFGLASLIGSVASLV------PLITPPITS-DQVTLLKSDNVVSKEAEAEGRTLKGIGL 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
+P L YL+ YR G
Sbjct: 298 LPTLLISVLPSYLVRYRPQG 317
>gi|433612115|ref|YP_007188913.1| putative nucleoside-diphosphate-sugar epimerase [Sinorhizobium
meliloti GR4]
gi|429550305|gb|AGA05314.1| putative nucleoside-diphosphate-sugar epimerase [Sinorhizobium
meliloti GR4]
Length = 326
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 171/321 (53%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GR+VV+ LAK G ++ V R D HL+ +G++GQI ++ N R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGHLQPLGNVGQISFVQANLRYRR 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VIN +G +E+ +FE V F A +A A+ G + IS +GA
Sbjct: 68 SVDRAVDGADHVINCVGVLFESGRNTFEAVQDFGARAVAEAARATGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S TK AE A+L LP A I+RP+ + G ED NK+A+ + PL G G
Sbjct: 126 ANSESSYARTKGRAEAAILETLPAAVILRPSIIFGPEDGFFNKFAEMARFSPVLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
+T+ QPVYV DVA AV ++ DGT + G IYELGGP + + E ++M TI +V
Sbjct: 186 NTKFQPVYVTDVAEAVARSV--DGTLTGGTIYELGGPQVLSFRECLDIMLKTIDRKRSFV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +A + + VPF P D++ SD +VS A T +G
Sbjct: 244 SLPFGIASLMGS----VASLVPFITPP---LTADQVVLLKSDNVVSAKAEAEGRTLAGIG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P L+ YL+ YR G
Sbjct: 297 IEPTMLESILPTYLVRYRPHG 317
>gi|354547401|emb|CCE44136.1| hypothetical protein CPAR2_503600 [Candida parapsilosis]
Length = 384
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 182/338 (53%), Gaps = 36/338 (10%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFN 63
+G ATVFG +GFLGRY+V +LA+ G+ +VPFR DD R LK+ GDLG + ++ +
Sbjct: 49 TGYTATVFGASGFLGRYLVSKLARHGTTTIVPFR---DDMKKRFLKVAGDLGVVNFVEID 105
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R+ +I+ ++A +++VIN IG +Y T+N++ DVN +AERIA K+ G+ R+I +S
Sbjct: 106 ARNLQSIQDSVAHSDIVINCIGADYNTKNFTMADVNIALAERIAQATKD-AGVPRYIHVS 164
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A S S ++TK E+ V +P +TI+RP+ M G ED LLN +K + P
Sbjct: 165 SYNADPKSESIFYATKGIGEQVVRDIIPDSTIVRPSQMFGREDNLLNYLGPKIKMWT--P 222
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
+I PV+V+DVA A+ DD T +G++YEL GP+ + ++ ++++ Y
Sbjct: 223 --NRNQKQIYPVHVLDVARALEKIAYDDST-VGQLYELYGPEKLSYLDIRQMIHGITENY 279
Query: 244 PHY---------VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
+P +AK +A ++++ K L N D++ + D +
Sbjct: 280 AQAGPISYNFYDYDLPLSIAKIIAQVQQLVWWK---------LANPDQMQRHVIDQHIDP 330
Query: 295 NALTFQDLGIVPH-KLKGYPTEYLIWYR------KGGP 325
A TF DLG+ KL Y+ +R KGGP
Sbjct: 331 AAKTFADLGLHDQTKLADVLFSYVKQWRHPLIAQKGGP 368
>gi|114705625|ref|ZP_01438528.1| putative oxidoreductase protein [Fulvimarina pelagi HTCC2506]
gi|114538471|gb|EAU41592.1| putative oxidoreductase protein [Fulvimarina pelagi HTCC2506]
Length = 335
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 168/325 (51%), Gaps = 17/325 (5%)
Query: 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
V +G VFG +GFLGRYV Q LAK G +V + R D H+ G++G I+P++ N
Sbjct: 3 VDTGKTVVVFGGSGFLGRYVTQALAKRGHRVRIACR-RPDLAYHVLTAGNIGAILPIQAN 61
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R +++ + A+ V+NL+G E+ +F + A IA A+ G + QIS
Sbjct: 62 LRYPWSVERAVKGADHVVNLVGILAESGKQTFSGLQAEGARLIAEAARAEG--VNMTQIS 119
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
+GA S S+ TKAA E+AV P A I+RP+ + G ED N++A+ + P
Sbjct: 120 AIGADEGSNSKYARTKAAGEKAVHAARPDAYILRPSIVFGPEDEFFNRFAEMSRFSPVLP 179
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G G T+ QP+YVVDVA AV + D+ + G +YELGGP++ + +L E M I
Sbjct: 180 LLGGGKTKFQPIYVVDVAEAVAKTV-DNEVAGGTVYELGGPEVLSFRQLMEEMLRVINRK 238
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TF 299
+V +PF +A ++A + VP P D++ +D +VS+ A+ T
Sbjct: 239 RRFVSIPFSLAGSMAQ----FAQYVPGAPLTP-----DQVKQLQNDNVVSEEAIADGRTL 289
Query: 300 QDLGIVPHKLKGYPTEYLIWYRKGG 324
GI P + YL+ +R G
Sbjct: 290 DAFGIRPRTVDSILPTYLVRFRPQG 314
>gi|90421961|ref|YP_530331.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisB18]
gi|90103975|gb|ABD86012.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisB18]
Length = 349
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 170/320 (53%), Gaps = 16/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV LAK ++ V R D HL+ +G +GQI ++ N R +
Sbjct: 30 LVTVFGGSGFIGRHVVGALAKRDFRIRVAVR-RPDLTGHLQPLGKVGQIHAVQANLRYPD 88
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A + A +V+NL+G E F+ V A IA A R + +S +GA
Sbjct: 89 SVQAAVRDAGIVVNLVGILAEGGAQKFQAVQAQGAGAIAQAAAAV--GARMVHVSAIGAD 146
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S +KAA E+AVL +P A I RP+ + G ED+ N++A + PL G G
Sbjct: 147 AQSASLYARSKAAGEQAVLAAVPQAVIFRPSVVFGPEDQFTNRFAGLARMSAVVPLIGGG 206
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+T++QPVYV DVA AV A+ D G YELGGP++ T+ ++ E++ D I+ +
Sbjct: 207 ATKLQPVYVGDVATAVAQAV-DGKAKPGATYELGGPEVLTMRQVIEIILDVIQRRRILLS 265
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A+ A LL+ P PL D++ D +VS+ A LT Q LGI
Sbjct: 266 LPFGLARLQAQ----LLQFAPGPLK----LTPDQVALLQVDNVVSEAAQAAGLTLQGLGI 317
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P L+ YL +R G
Sbjct: 318 PPDSLQAIAPSYLWRFRATG 337
>gi|298290323|ref|YP_003692262.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506]
gi|296926834|gb|ADH87643.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506]
Length = 340
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 171/320 (53%), Gaps = 17/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GR+VV+ LAK G +V V R D HL+ +G +GQI P++ N R
Sbjct: 26 LVTIYGGSGFIGRHVVRALAKRGWRVRVAVR-RPDLAGHLQPLGAVGQINPVQANLRYPA 84
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A VVINL+G +E+ SFE V+ F A+++A A+E G R I S +GA+
Sbjct: 85 SVLRAAEGAEVVINLVGVLHESGRQSFEAVHAFGAKQVALAAREVGA--RLIHGSAIGAN 142
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S + +KAA E A +P A IMRP+ + G ED N++A + PL G G
Sbjct: 143 AESTAFYGKSKAAGEAAAFEAVPEAVIMRPSIVFGPEDDFFNRFASMSRLSPVLPLIGGG 202
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPV+V DVA A A+ D+ G +YELGGP+I + +L ELM I +
Sbjct: 203 ETRFQPVFVGDVAEAYARAV-DNLARPGTVYELGGPEILSFKQLMELMLAEIDRK----R 257
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+ PV AVA + L+ +P P L D++ D +VS+ A T + LGI
Sbjct: 258 LLVPVPSAVAAFKARFLELLPNP-----LLTRDQVRMLGYDNVVSEAAKAEGRTLEGLGI 312
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P L YL YRK G
Sbjct: 313 KPTALGAILPSYLWRYRKAG 332
>gi|83953161|ref|ZP_00961883.1| NADH ubiquinone oxidoreductase, putative [Sulfitobacter sp.
NAS-14.1]
gi|83842129|gb|EAP81297.1| NADH ubiquinone oxidoreductase, putative [Sulfitobacter sp.
NAS-14.1]
Length = 327
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 164/316 (51%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TV+G +GF+GRY+V+++A G +V V R ++ ++ G +GQ+ P+ N RDD
Sbjct: 4 LVTVYGGSGFVGRYIVRRMALAGWRVRVAVR-RPNEALFVRTYGTVGQVEPVFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + A+ V+N +G E +F+ + AERIA +A G I R +QIS +GA
Sbjct: 63 SVRDALQGADAVVNCVGILAEAGKNTFDAIQADGAERIARLAAAEG-ITRLVQISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ + S TKA E VL+ +P A I+RP+ + G ED N++A + P G
Sbjct: 122 AEADSEYAQTKAMGEAGVLKHMPQAVILRPSIVFGPEDDFFNRFAGMTRISPAIPAVG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T QPVYV DVA A A L G + IYELGGP++ + L + M D + V
Sbjct: 181 DTLFQPVYVDDVAHA--AELAVTGKAPAGIYELGGPEVESFRGLMQRMLDVVNRRRMVVA 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P VAK +A ++ L+ V L + D++ D +V + A F LGI P
Sbjct: 239 LPTFVAKVIAFGLDV-LQSVTLGLVKNNTLTRDQVKNLAHDNVVGEGARGFDALGISPVS 297
Query: 309 LKGYPTEYLIWYRKGG 324
+ EYL +R G
Sbjct: 298 MGSVLPEYLWRFRPSG 313
>gi|346994832|ref|ZP_08862904.1| NADH ubiquinone oxidoreductase, putative [Ruegeria sp. TW15]
Length = 327
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 169/317 (53%), Gaps = 8/317 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRY+ +++A G +V V R ++ ++ G +GQ+ P+ N RDD
Sbjct: 4 LVTIFGGSGFVGRYIARRMAAEGWRVRVAVR-RPNEAMFVRPYGAVGQVEPILCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + M + V+N +G E +F+ V AERIA +A + + R + IS +GA
Sbjct: 63 SVASAMHGVDAVVNCVGVLNELGKNAFDAVQADGAERIARLAASND-VDRMVHISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TKA E VL+ + A I+RP+ + GTED+ N++A + F PL G
Sbjct: 122 LESDSEYARTKAQGEANVLQHMQGAVILRPSIIFGTEDQFFNRFAGMTRMSPFLPLVG-A 180
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T+ QPVYV DVA AAV L G + +YELGGP++ + L + M + I +
Sbjct: 181 DTKFQPVYVDDVAQAAVQGVL---GKASAGVYELGGPEVKSFRGLMQQMLEVIHRRRIII 237
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+PF AK +A +I +K V F L + D++ D +V+++A F DLGI P
Sbjct: 238 GMPFLAAKIMAGVLDI-VKFVSFQLFPNNILTRDQVRNLRRDNVVAEDAKGFVDLGIEPA 296
Query: 308 KLKGYPTEYLIWYRKGG 324
L EYL +R G
Sbjct: 297 TLDSILPEYLWKFRPSG 313
>gi|254466954|ref|ZP_05080365.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodobacterales
bacterium Y4I]
gi|206687862|gb|EDZ48344.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodobacterales
bacterium Y4I]
Length = 330
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 166/316 (52%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ H+K G GQ+ P+ N RDD
Sbjct: 5 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMHVKPYGVPGQVEPVFCNVRDDM 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M A+ V+N +G E +F V+ A RIA IA + G + + IS +GA
Sbjct: 64 SVAAVMRGADAVVNCVGVLNELGKNTFGAVHAEGAGRIARIAAQEG-VASLVHISAIGAD 122
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ + S TKAA E AVL P A I+RP+ + G ED N++A + P+ G
Sbjct: 123 TDANSAYSRTKAAGETAVLEHFPGAVILRPSVIFGAEDEFFNRFAGMTRLSPVLPI-ASG 181
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPVYV DVA A + G IYELGGP++ + EL E M I +
Sbjct: 182 DTRFQPVYVDDVAKAAVMGATG--AAAGGIYELGGPEVKSFRELMEQMLAVIHRRRLILS 239
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P A VA + +L+ F L + D++ + SD +VS++A F DLGI P
Sbjct: 240 LPRFAAWLVAFGFD-MLQAASFQLIANKVLTRDQLRSLKSDNVVSEDAKGFSDLGISPVS 298
Query: 309 LKGYPTEYLIWYRKGG 324
L+ +YL +R G
Sbjct: 299 LEAVLPDYLWKFRPSG 314
>gi|384263591|ref|YP_005418780.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Rhodospirillum
photometricum DSM 122]
gi|378404694|emb|CCG09810.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Rhodospirillum
photometricum DSM 122]
Length = 321
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 165/320 (51%), Gaps = 19/320 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNPR 65
G + TVFG TGF+GR +V LA G++V V R E P LK++GDLGQI P+ +
Sbjct: 5 GRVVTVFGGTGFIGRPLVGALAAHGARVRVAVRDVERVSP--LKILGDLGQIAPITASLT 62
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+++ + A+ V+NL+G E+ +F+ V H R A G+ + +S L
Sbjct: 63 HPDSVHRAVEGADAVVNLVGILSESGRQTFQSV-HVEGARTVARAAAQAGVGTLVHMSAL 121
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA + SP+R +KAA E AV +P A I+RP+ + G +DR N +A F + P F
Sbjct: 122 GACADSPARYAQSKAAGEAAVREAVPQAAIVRPSVVFGPDDRFFNLFASFTRFSPVLPYF 181
Query: 186 GD----GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
GS R QPV+V DV A+T ++ G+ +ELGGP ++++ E+ EL+
Sbjct: 182 DRGGSLGSPRFQPVFVGDVVQAITTLVETP--RPGETFELGGPQVYSMREIMELIVRETH 239
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
+K+PF VA+ A LL ++P PL P D++ D ++S +
Sbjct: 240 RATRVIKLPFWVAQTQAA----LLGRLPNPLLTP-----DQVLMLQKDNVLSGACPGLEA 290
Query: 302 LGIVPHKLKGYPTEYLIWYR 321
LGI P ++ YL +R
Sbjct: 291 LGIEPQAVEAVVPSYLSRFR 310
>gi|46127159|ref|XP_388133.1| hypothetical protein FG07957.1 [Gibberella zeae PH-1]
Length = 624
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 173/317 (54%), Gaps = 17/317 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G TVFG TG LGRY+V +LA+ G V++P+R E RHLK+ GDLG++V ++ + R+
Sbjct: 48 GHTVTVFGATGQLGRYIVNRLARQGCTVVIPYRE-EMAKRHLKVTGDLGRVVFIEHDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
++I+A++ ++ V NLIGR+Y T+N+S EDV+ ERI ++ + R+I +S
Sbjct: 107 TSSIEASVRHSDAVFNLIGRDYPTKNFSLEDVHVEGTERIVEAVCKY-DVDRYIHVSSHS 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+S S S + TK AEE P TI+RPA + G ED LL K A F
Sbjct: 166 ANSQSTSEFYRTKGRAEEVARSLFPETTIVRPAPIFGFEDNLLLKLAGVTNLFT----SN 221
Query: 187 DGSTRIQPVY--VVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
+ + PV+ +D+ AA+ DD T+ G+ +EL GP +++ E++ ++ I +
Sbjct: 222 NMQEKFYPVHPQSIDIGAALEKIFFDD-TTAGQTFELYGPKKYSMEEISVMVDKEIYKQR 280
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
++ VP KA+ P LL KV + + DE+ D ++ A TF+DLGI
Sbjct: 281 RHLNVP----KAILKPVAELLNKVLW----WHTMSADEVEREFLDQVIDPKAKTFKDLGI 332
Query: 305 VPHKLKGYPTEYLIWYR 321
P + + YL +R
Sbjct: 333 EPGDIINFTYHYLQGFR 349
>gi|414164521|ref|ZP_11420768.1| hypothetical protein HMPREF9697_02669 [Afipia felis ATCC 53690]
gi|410882301|gb|EKS30141.1| hypothetical protein HMPREF9697_02669 [Afipia felis ATCC 53690]
Length = 321
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 169/322 (52%), Gaps = 21/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LA+ ++ V R E HL+ +G +GQI P++ N R
Sbjct: 8 LVTVFGGSGFLGRHVVRALAQRDYRLRVGVRRPEL-AGHLQPLGKVGQINPVQANVRYPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M + VV+NL+G E F V A IA A R + +S +GA+
Sbjct: 67 SLDAAMRGSRVVVNLVGILSEGGAQRFNAVQAEGARAIAEAAARI--GARVVHVSAIGAN 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S SR ++KA E+AVL P ATI+RP+ + G ED N++A + F PL G
Sbjct: 125 ANSASRYATSKALGEQAVLEATPDATIIRPSIVFGPEDHFTNRFAALARLFPALPLIG-A 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T++QPVYV DVA+A+ A+ D T G YELGGP++ T+ E EL+ P V
Sbjct: 184 DTKLQPVYVGDVASAIADAV-DGKTKAGATYELGGPEVMTMREAIELILRVAERDPMLVP 242
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDL 302
+PF +AK A F PG L D++ +D +VSD A LT + L
Sbjct: 243 LPFGLAKLQAA----------FLQFAPGDLKLTPDQVEMLKTDNVVSDAAKSAGLTLEGL 292
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P + YL +RK G
Sbjct: 293 GIAPESMAAVLPSYLWRFRKTG 314
>gi|260577299|ref|ZP_05845272.1| NADH dehydrogenase [Rhodobacter sp. SW2]
gi|259020480|gb|EEW23803.1| NADH dehydrogenase [Rhodobacter sp. SW2]
Length = 342
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 166/316 (52%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRY+ +++A+ G +V V R +D ++ GD+GQ+ P+ N RDD
Sbjct: 18 LVTIFGGSGFVGRYIARRMAQQGWRVRVAVR-HPNDALFVRPYGDVGQVEPVACNIRDDA 76
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M A+ V+N +G +F V A RIA IA E G + + +S +GA
Sbjct: 77 SVRAVMQGADAVVNCVGILNPDGRNTFFAVQSDGAGRIARIATEFG-VANLVHLSAIGAD 135
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++SPS +KAA E AVL+ P A I+RP+ + G ED+ N++A K PL G
Sbjct: 136 ANSPSIYAKSKAAGEAAVLKAFPNAVILRPSVIFGPEDQFFNRFASMAKIGPVLPLVG-A 194
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPVYV DVA A A + + IYELGGPD+ T L + M I+ V
Sbjct: 195 NTRFQPVYVDDVAQAAALAAQG--LAAPGIYELGGPDVATFSALMQQMLAVIQRKRVIVN 252
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
PF AK + + LL+ V L + D++ D +V+ A F +LGI P
Sbjct: 253 TPFFAAKLMGTGFD-LLQIVTGGLINNKILTRDQVRNLARDNVVAPGARGFAELGITPSA 311
Query: 309 LKGYPTEYLIWYRKGG 324
+ EYL R G
Sbjct: 312 IAAVLPEYLWPNRPSG 327
>gi|15964083|ref|NP_384436.1| oxidoreductase [Sinorhizobium meliloti 1021]
gi|15073259|emb|CAC41767.1| Probable NADH-ubiquinone oxidoreductase [Sinorhizobium meliloti
1021]
Length = 326
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 170/321 (52%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GR+VV+ LAK G ++ V R D HL+ +G++GQI ++ N R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGHLQPLGNVGQISFVQANLRYRR 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VIN +G +E+ +FE V F A +A A+ G + IS +GA
Sbjct: 68 SVDRAVDGADHVINCVGVLFESGRNTFEAVQDFGARAVAEAARATGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S TK AE A+L LP A I+RP+ + G ED NK+A+ + PL G G
Sbjct: 126 ANSESSYARTKGRAEAAILETLPAAVILRPSIIFGPEDGFFNKFAEMARFSPVLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
+TR QPVYV DVA AV ++ DGT + G IYELGGP + + E ++M TI +V
Sbjct: 186 NTRFQPVYVTDVAEAVARSV--DGTLTGGTIYELGGPQVLSFRECLDIMLKTIDRKRSFV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +A + + VPF P D++ D +VS A T +G
Sbjct: 244 SLPFGIASLMGS----VASLVPFITPP---LTADQVVLLKLDNVVSAKAEAEGRTLAGIG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P L+ YL+ YR G
Sbjct: 297 IEPTMLESILPTYLVRYRPHG 317
>gi|417101195|ref|ZP_11960397.1| putative NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli CNPAF512]
gi|327192023|gb|EGE59004.1| putative NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli CNPAF512]
Length = 396
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 161/320 (50%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI ++ N R N
Sbjct: 79 LVTVFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISLVQANLRYRN 137
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G ET +F+ V F A +A A+ G + IS +GA+
Sbjct: 138 SIDRAVDGASHVVNCVGILQETGRNTFDAVQEFGARAVAEAARNAGATL--AHISAIGAN 195
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S+S S TK AE A+L P A I RP+ + G ED NK+A + PL G G
Sbjct: 196 SNSDSDYGRTKGRAEAAILSIKPDAVIFRPSIVFGPEDSFFNKFADMARMSPVLPLVGGG 255
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV A+ D +GK+YELGGP++ + E E M V
Sbjct: 256 KTKFQPVYVEDVAEAVARAV-DGKVPVGKVYELGGPEVLSFRECLETMLKVTSRKNRLVS 314
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + +PF P D++ D +VS A T + LGI
Sbjct: 315 LPFGIASMIGS----IASLIPFVTP---PITPDQVRLLKRDNVVSAEAEAEGRTLKGLGI 367
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P YL+ YR G
Sbjct: 368 APTMAASVLESYLVQYRPHG 387
>gi|126738417|ref|ZP_01754122.1| NADH ubiquinone oxidoreductase, putative [Roseobacter sp.
SK209-2-6]
gi|126720216|gb|EBA16922.1| NADH ubiquinone oxidoreductase, putative [Roseobacter sp.
SK209-2-6]
Length = 329
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 166/316 (52%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ H+K G GQ+ P+ N R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMHVKPYGVPGQVEPVLCNIRNDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M A+ V+N +G E +F V A R+A IA + G + + IS LGA
Sbjct: 63 SVAAAMQGADAVVNCVGILNELGKNTFTSVQVDGAARVARIAHKQG-VDNLVHISALGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S +KA EEAVL P A I+RP+ + G+ED N++A P+ G
Sbjct: 122 AEGASEYARSKALGEEAVLGYFPSAVILRPSVIFGSEDGFFNRFAGMASLSPVLPI-AKG 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA A A++ + S IYELGGP++ + +L + M I +
Sbjct: 181 GTKFQPVYVDDVAKAAVKAIQGEAAS--GIYELGGPEVKSFSDLLKDMLPVIHRRRLVLS 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P VA+ VA+ +I ++ F L + D++ + D +V+D A F DLGI P
Sbjct: 239 MPGFVARLVALGFDI-VQFASFQLVENKILTRDQLKSLGRDNVVADGAKGFADLGIEPEM 297
Query: 309 LKGYPTEYLIWYRKGG 324
L YL YR G
Sbjct: 298 LGPILPSYLWKYRPSG 313
>gi|405376833|ref|ZP_11030785.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
CF142]
gi|397326733|gb|EJJ31046.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
CF142]
Length = 326
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 160/320 (50%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI ++ N R N
Sbjct: 9 LVTVFGGSGFIGRHVVRVLAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISLVQANLRYRN 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ VIN +G +E+ +F+ V F +A A+ G + IS +GA+
Sbjct: 68 SIDRAVEGADHVINCVGILFESGRNTFDAVQEFGGRAVAEAARSVGATL--THISAIGAN 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TK AE A+L P A I RP+ + G ED NK+A + F PL G G
Sbjct: 126 AGSNSNYGRTKGRAEAAILSIKPDAIIFRPSIVFGPEDSFFNKFADMARTFPVLPLVGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV A+ D GKIYELGGP++ T E E + V
Sbjct: 186 KTKFQPVYVEDVAEAVARAV-DGKVEGGKIYELGGPEVLTFRECLETILKVTVRKNRLVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + ++ PF P D++ D +VS A T + LGI
Sbjct: 245 LPFSIASLIGSIASLM----PFIAPP---ITPDQVKLLKHDNVVSKAAEAEGRTLKGLGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P YL+ YR G
Sbjct: 298 TPTMATSVLDSYLVQYRPHG 317
>gi|448078969|ref|XP_004194282.1| Piso0_004769 [Millerozyma farinosa CBS 7064]
gi|359375704|emb|CCE86286.1| Piso0_004769 [Millerozyma farinosa CBS 7064]
Length = 380
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 171/310 (55%), Gaps = 29/310 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFN 63
+G ATVFG +GFLGRY+ +LAK G+ +VP+R DD R LK+ GDLG + ++F+
Sbjct: 49 TGYTATVFGASGFLGRYLSSKLAKHGTITIVPYR---DDMKKRFLKVAGDLGVVNFVEFD 105
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R+ +I+ ++A +++V N +G +Y T+N+S DVN + ERIA + KE G RF+ +S
Sbjct: 106 SRNLKSIQDSVAHSDIVFNCVGVDYNTKNFSMADVNIGITERIAQVVKETGN-PRFVHVS 164
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A+ S S ++TK E V +P ATI+RPA M G ED LLN +K + P
Sbjct: 165 SYNANPESESVYYATKGIGENIVRDLVPDATIVRPAPMYGREDNLLNYLGPKIKMWT--P 222
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
I PV+V+DVA A+ DD T +G+ YEL GP+ + E+ ++++ + +
Sbjct: 223 --NKNGKEIYPVHVLDVAKALEKIGYDDST-VGQTYELYGPEKLSYLEIRQMIHGITQNF 279
Query: 244 PHY---------VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
++P +AK VA ++ LP L N D+I + + +
Sbjct: 280 AQAGPFAYKFADYEIPLWLAKIVADVKQ---------LPYWKLTNSDQIQRHVINQTIDS 330
Query: 295 NALTFQDLGI 304
+A TF+DLGI
Sbjct: 331 SAKTFKDLGI 340
>gi|225710584|gb|ACO11138.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Caligus rogercresseyi]
Length = 420
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG++ATVFG T +G V +L K+GSQ+++P+RG LK+ GDLGQ++ F+
Sbjct: 51 FSGMVATVFGATDLVGTVVCNRLGKIGSQIVIPYRGDMYGYLPLKMAGDLGQVLFSPFHL 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+DD +I M +++VIN IGRE+ET+N+ FEDVN ER+A +AKE G+ RF+ IS
Sbjct: 111 KDDESILKAMKYSDIVINAIGREWETKNFKFEDVNIHGPERLARLAKE-AGVSRFVHISS 169
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK 177
L A + SR TK E AVL P ATI R + + G D + +A +
Sbjct: 170 LNARENPDGAFLPKGSRWLKTKWQGENAVLEAFPDATIFRASDIYGHNDSFIGHYAATAR 229
Query: 178 KFNF----FPLFGDGSTRIQ-PVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHEL 232
N PL+ G I+ P++V D+ + + A+ DD T G YE GP++ + ++
Sbjct: 230 LSNINLRTLPLWKKGEHTIKAPIHVGDLVSGIMEAVSDDSTK-GVTYEAYGPEMHKLSDI 288
Query: 233 AELMYDTIREYPH---YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSD 289
+ +Y I + P Y + +V + + + +PF G +D+++
Sbjct: 289 VDWIYYYINKDPSNFGYRRTDLRYDPSV-FAKALFYQNMPFGQKANGKLGIDKLDKMA-- 345
Query: 290 TIVSDNAL---TFQDLGIVPHKLKGYPTEYLIWYR 321
+SD + QDLGI P L +L Y+
Sbjct: 346 --ISDEVMGLPNLQDLGIAPGTLAQKMPPHLTIYK 378
>gi|83942106|ref|ZP_00954568.1| NADH ubiquinone oxidoreductase, putative [Sulfitobacter sp. EE-36]
gi|83847926|gb|EAP85801.1| NADH ubiquinone oxidoreductase, putative [Sulfitobacter sp. EE-36]
Length = 327
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 163/316 (51%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TV+G +GF+GRY+V+++A G +V V R ++ ++ G +GQ+ P+ N RDD
Sbjct: 4 LVTVYGGSGFVGRYIVRRMALAGWRVRVAVR-RPNEALFVRTYGTVGQVEPVFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + A+ V+N +G E +F+ + AERIA +A G I R +QIS +GA
Sbjct: 63 SVRDALQGADAVVNCVGILAEAGKNTFDAIQADGAERIARLAAAEG-ITRLVQISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ + S TKA E VL+ +P A I+RP+ + G ED N++A + P G
Sbjct: 122 AEADSEYAQTKAMGEAGVLKHMPQAVILRPSIVFGPEDDFFNRFAGMTRISPAIPAVG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T QPVYV DVA A A L G + IYELGGP++ + L + M D + V
Sbjct: 181 DTLFQPVYVDDVAHA--AELAVTGKAAAGIYELGGPEVESFRGLMQRMLDVVNRRRMVVA 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P VA+ +A ++ L+ V L + D++ D +V A F LGI P
Sbjct: 239 LPTFVARVIAFGLDV-LQSVTLGLVKNNTLTRDQVKNLAHDNVVGGGAQGFDALGISPVS 297
Query: 309 LKGYPTEYLIWYRKGG 324
+ EYL +R G
Sbjct: 298 MGSVLPEYLWRFRPSG 313
>gi|39933125|ref|NP_945401.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Rhodopseudomonas palustris CGA009]
gi|39652750|emb|CAE25489.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Rhodopseudomonas palustris CGA009]
Length = 321
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 170/322 (52%), Gaps = 21/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV LA+ ++ V R E HL+ +G +GQI ++ N R
Sbjct: 8 LVTVFGGSGFLGRHVVSALARRDYRIRVAVRRPEL-AGHLQPLGRVGQIHAVQANLRYPE 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M ++V INL+G E F+ V A +A A G R + +S +GA
Sbjct: 67 SVAAAMRGSHVAINLVGILAEGGAQKFDAVQGSGAATVAQAAASVGA--RMVHVSAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++SP+R +KAA E+AVL +P ATI RP+ + G ED+ N++A + PL G
Sbjct: 125 ANSPARYARSKAAGEQAVLAAVPQATIFRPSVVFGPEDQFTNRFAMLARMSPVLPLVG-A 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T++QPVYV DVA A+ A+ D G YELGGP+ T+ E+ ++ T P V
Sbjct: 184 DTKLQPVYVGDVATAIADAV-DGLAKPGATYELGGPEELTMREIMRIILQTTDRNPLLVP 242
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDL 302
+PF +A AM LL+ PG F L D++ D +VS+ A LT Q L
Sbjct: 243 LPFGLASLQAM----LLQFA------PGAFKLTPDQVRMLEVDNVVSEAAKSAGLTLQGL 292
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P L+ YL +RK G
Sbjct: 293 GIQPDSLQAIVPSYLWRFRKTG 314
>gi|345568304|gb|EGX51201.1| hypothetical protein AOL_s00054g577 [Arthrobotrys oligospora ATCC
24927]
Length = 382
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 166/298 (55%), Gaps = 16/298 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG GFLGRY+V +LA+ G V++P+R E RHLK+ GDLG+I ++F+ R+
Sbjct: 53 GHTATVFGAAGFLGRYIVNRLARTGCNVVIPYRE-EMWKRHLKVTGDLGRITFLEFDLRN 111
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++VINLIGR+YET+N++F DV+ +RIA ++ I R+I +S
Sbjct: 112 TESIEESVRHSDIVINLIGRDYETKNFNFWDVHVEGTQRIAEAVAKY-DIDRYIHVSSHN 170
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +SPS + TKA E P TI+RPA + G EDRLL F + +
Sbjct: 171 ADLNSPSAFYRTKAEGELEARAIFPETTIVRPARVWGEEDRLL----LFHAQKRYLITSN 226
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ R +PV+ +DV A+ DD T +G+ YEL GP +++ E+ E++ + + +
Sbjct: 227 NLQERFRPVHSIDVGRALERIAYDDST-VGQTYELFGPKEYSMGEIREMVKNETKRNLTH 285
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+ VP K + + V +PL ++DE+ D + A TF DLG+
Sbjct: 286 INVP----KKLQQIYRAAWEYVWWPLT-----SVDEVEREFIDHQIDPTAKTFADLGM 334
>gi|389609269|dbj|BAM18246.1| NADH-ubiquinone oxidoreductase 39 kda subunit [Papilio xuthus]
Length = 396
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 145/247 (58%), Gaps = 11/247 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ATVFG TGF+GRYV +L K+G+Q+++P+R D LK+ GDLGQ++ F+
Sbjct: 52 FNGIVATVFGCTGFVGRYVCNKLGKIGTQMILPYRSDFYDANRLKVAGDLGQVLFTPFDI 111
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD+ +I + +NVVINL+GR+YET+N+S+ DV+ RIA I +E G+ RFI +S
Sbjct: 112 RDEESIAKAVKYSNVVINLVGRDYETKNFSYTDVHVDGPRRIARICREM-GVERFIHLSY 170
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK 177
L A PS +K E AV E P ATI R + + G+EDR + A +
Sbjct: 171 LNAERHPQPLVLRKPSMYKISKYLGECAVREEFPTATIFRASDIYGSEDRFIRSLATGWR 230
Query: 178 KF-NFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
N P++ +G I QPVYV DVA + A +D T ++Y+ GP + + +L +
Sbjct: 231 SHGNLVPVYKNGMETIKQPVYVSDVAQGIVNAARDPDTRC-QVYQAIGPKRYLLADLIDW 289
Query: 236 MYDTIRE 242
Y +R+
Sbjct: 290 FYKLMRK 296
>gi|424889018|ref|ZP_18312621.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393174567|gb|EJC74611.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 326
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 165/321 (51%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI ++ N R N
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRN 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G +ET +F+ V F A +A A+ G + IS +GA+
Sbjct: 68 SIDRAVDGADHVVNCVGILHETGRNTFDAVQEFGARAVAEAARGAGATL--AHISAIGAN 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S TK AE A+L P A I RP+ + G ED NK+A + PL G G
Sbjct: 126 ANSDSGYGRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFADMARMSPVLPLVGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T+ QPVYV DVA AV A+ DGT + GKIYELGGP++ + E E+M V
Sbjct: 186 KTKFQPVYVEDVAEAVARAV--DGTVAGGKIYELGGPEVLSFRECLEMMLKVTSRKNPLV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +A + + +PF P D++ D +VS A T + LG
Sbjct: 244 SLPFGIASMIGS----IASLIPFITPP---ITPDQVRLLKRDNVVSAEAEAEGRTLKGLG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P YL+ YR G
Sbjct: 297 IAPTMPASVLGSYLVHYRPHG 317
>gi|427427384|ref|ZP_18917428.1| NAD-dependent epimerase/dehydratase [Caenispirillum salinarum AK4]
gi|425883310|gb|EKV31986.1| NAD-dependent epimerase/dehydratase [Caenispirillum salinarum AK4]
Length = 343
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 170/333 (51%), Gaps = 32/333 (9%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR++V++LA+ G +V V R E LK MGDLGQI + + DD+
Sbjct: 7 LVTVFGGSGFIGRHLVRRLARNGDRVRVAVRDTEK-ASFLKPMGDLGQISLVPASILDDD 65
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++K + A+ V+NL+G E+ +FE ++ ERIA +AKE G+ R +Q+S LGAS
Sbjct: 66 SVKRAVEGADAVVNLVGILAESGKATFERMHVEGPERIARLAKE-AGVARMVQVSALGAS 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF--- 185
S S TKA EEAV + P A I+RP+ + G ED+ N +A+ + P F
Sbjct: 125 KDSDSVYAQTKARGEEAVRKHFPDADILRPSVVFGPEDQFFNMFAKIARLSPVLPFFTDD 184
Query: 186 -----------------GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFT 228
G G + QPVYV DVA A+ L D + G+ +ELGG ++ +
Sbjct: 185 APALKKDPSGRFQLDLVGGGGPKFQPVYVGDVAEAIMRLLDADAPT-GQTFELGGDEVVS 243
Query: 229 VHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS 288
+ ++ +++ R V +P VA A ++L KK+ D++
Sbjct: 244 MRDIMKIVAHETRRRRAIVPLPMWVADVEATFLQMLPKKI---------LTRDQVRQLRK 294
Query: 289 DTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYR 321
D +VS +DLGI P ++ YL +R
Sbjct: 295 DNVVSGEFPGLKDLGIEPTTVEAIVPTYLTRFR 327
>gi|424879664|ref|ZP_18303296.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392516027|gb|EIW40759.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 326
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 165/321 (51%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G + V R D L+ +G++GQI ++ N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYNIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRS 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G +ET +F+ V F A IA A+ G + IS +GA
Sbjct: 68 SIDRAVDGASHVVNCVGILHETGRNTFDAVQEFGARAIAEAARGAGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TK AE A+L P A I RP+ + G ED NK+A+ + PL G G
Sbjct: 126 AKSDSDYGRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFAEMARMSPILPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYPHYV 247
T+ QPVYV DVA AV A+ D + GK+YELGGP++ + E E M T R+ P V
Sbjct: 186 KTKFQPVYVEDVAEAVARAV-DGKVAGGKVYELGGPEVLSFRECLETMLKVTCRKNP-LV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF VA + + +PF P D++ D +VS A T + LG
Sbjct: 244 SLPFGVASMIGS----IASLIPFITPP---ITPDQVRLLKRDNVVSKEAEAEGRTLKGLG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL+ YR G
Sbjct: 297 ITPTMVASVLGSYLVHYRPHG 317
>gi|402490668|ref|ZP_10837457.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. CCGE 510]
gi|401810694|gb|EJT03067.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. CCGE 510]
Length = 326
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 167/321 (52%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G + V R D L+ +G++GQI ++ N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYNIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRS 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G +ET +F+ V F A +A A+ G + IS +GA+
Sbjct: 68 SIDRAVDGASHVVNCVGILHETGRNTFDAVQEFGARAVAEAARGAGATL--THISAIGAN 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S TK AE A+L P A I+RP+ + G ED NK+A + PL G G
Sbjct: 126 ANSESGYGRTKGRAETAILSIKPDAVILRPSIVFGPEDSFFNKFADMARMSPILPLVGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYPHYV 247
T+ QPVYV D+A AV A+ D + GK+YELGGP++ + E E M T R+ P V
Sbjct: 186 KTKFQPVYVEDIAEAVARAV-DGKVAGGKVYELGGPEVLSFRECLETMLKVTCRKNP-LV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF VA + ++ +PF P D++ D IVS A T + LG
Sbjct: 244 SLPFSVASLIGS----IVSLIPFVTPP---ITPDQVRMLKHDNIVSAAAEAEGRTLKGLG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P YL+ YR G
Sbjct: 297 ITPTMAASVLDSYLVHYRPHG 317
>gi|304392207|ref|ZP_07374149.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
[Ahrensia sp. R2A130]
gi|303296436|gb|EFL90794.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
[Ahrensia sp. R2A130]
Length = 320
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 167/327 (51%), Gaps = 21/327 (6%)
Query: 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
+Y+ + TVFG +GFLGRYVV++LA+ G +V V R D H++ GD+GQI ++ N
Sbjct: 1 MYTNKLVTVFGGSGFLGRYVVRELAERGYRVRVACR-RPDLAGHVQPSGDVGQIQFVQAN 59
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIM--RFIQ 121
R +I + A++V+N +G T +F+ + R AG E + +
Sbjct: 60 LRYRWSIDRAVEGADIVVNTVGILAATGKQTFDSLQA----RGAGWVSEAAAAAGAKMVH 115
Query: 122 ISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF 181
+S +GA S + TKA E+ V + P A IMRP+ + G ED N++A +
Sbjct: 116 VSAIGADEQSKADYARTKALGEDMVRKASPDAIIMRPSIIFGPEDDFFNRFAGMARIAPA 175
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
PL G G +R QPVYV DVA A+ A D+ G +ELGGP++ T E E M D I
Sbjct: 176 LPLIGGGKSRFQPVYVGDVAKAIANA-ADEKLEAGSTWELGGPEVLTFRECMERMLDVID 234
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL---- 297
V +PFP+A A+ LL+ P PG ++ SD +VSD+++
Sbjct: 235 RKRALVSLPFPIASAMGS----LLQFAPGAPITPG-----QVEMLKSDNVVSDDSITQNR 285
Query: 298 TFQDLGIVPHKLKGYPTEYLIWYRKGG 324
T +D G+ P L YL+ +RK G
Sbjct: 286 TLEDAGVEPTALSAVLPTYLVRFRKHG 312
>gi|329847603|ref|ZP_08262631.1| NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9
[Asticcacaulis biprosthecum C19]
gi|328842666|gb|EGF92235.1| NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9
[Asticcacaulis biprosthecum C19]
Length = 323
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 168/322 (52%), Gaps = 14/322 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLG+ VV+ LA+ +V V R +K MGD+GQI ++ + R D+
Sbjct: 4 VVTVFGGSGFLGKQVVRLLARSNWRVRVAVRHLAM-AYDVKPMGDVGQIQVVRCDVRRDS 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
I+A + A+ +NL+G YET + F+ V+ A ++A I G I F+Q+S LGA
Sbjct: 63 EIEAALKGADACVNLVGLLYETLSAKFDAVHRHAATKMAQICAAKG-IKDFVQVSALGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S S+K AE+ V + +P A I+RP+ + G D A +K F P FG
Sbjct: 122 PKSSSAYASSKGWAEDGVRKAIPTAVIIRPSIIFGQGDGFFTMLAAQLKLFPVIPAFGGA 181
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+ QPVYV DVA AV L + ++ GK+YELGGP++F +L + I++ V
Sbjct: 182 ENKFQPVYVGDVAGAVAKTL-GNASAYGKVYELGGPEVFAFKDLIAYVGKEIQQPRPLVW 240
Query: 249 VPFPVAKAVAMPREI------LLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
PF VA+ + + ++ +L VP P L D++ D +V AL +DL
Sbjct: 241 APFFVARMIGLAGDVQAGVHGMLSVVPAP-----LLTTDQVLLLQKDNVVPKGALGLKDL 295
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI ++ YL +RK G
Sbjct: 296 GIAATAVESIAPTYLWRFRKNG 317
>gi|92115815|ref|YP_575544.1| NAD-dependent epimerase/dehydratase [Nitrobacter hamburgensis X14]
gi|91798709|gb|ABE61084.1| NAD-dependent epimerase/dehydratase [Nitrobacter hamburgensis X14]
Length = 322
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 118/323 (36%), Positives = 178/323 (55%), Gaps = 22/323 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LAK ++ V R E HL+ +G +GQI ++ N R
Sbjct: 8 LVTVFGGSGFLGRHVVRALAKRDYRIRVGVRRPEL-AGHLQPLGKVGQIHAVQANLRYPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIM-RFIQISCLGA 127
+++A M ++V INL+G ++ +F+ V +AE A +AK R + +S +GA
Sbjct: 67 SVRAAMRDSHVAINLVGILSKSGAQTFDAV---VAEGAATVAKAAAATGARMVHVSAIGA 123
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
S S KAA E+AVL +P ATI+RP+ + G+ED+ N++A PL G
Sbjct: 124 DDKSASAYARAKAAGEKAVLAAVPSATILRPSVVFGSEDQFANRFAALALMSPVLPLIGG 183
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G+T++QPVYV DVA AV A+ D T G +YELGGP++ ++ E+ +++ I V
Sbjct: 184 GATKLQPVYVGDVATAVADAV-DGRTKAGAVYELGGPEVLSMREIIQIILRVIERERVLV 242
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQD 301
+PF +A+ AM F PG L D++ +D +VSD+A LT Q
Sbjct: 243 PLPFLIARFKAM----------FLQFAPGALKLTPDQVALLRTDNVVSDSATAAGLTLQG 292
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
LGI P ++ +YL +RK G
Sbjct: 293 LGISPDSMEAVVPQYLWRFRKAG 315
>gi|380023100|ref|XP_003695367.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Apis florea]
Length = 398
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 177/321 (55%), Gaps = 23/321 (7%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ TVFG +GF+G + +L K+G+Q+++P R R LK+ GDLGQ++ F+
Sbjct: 53 FNGIVCTVFGCSGFIGSSLCIRLGKIGTQLILPHRCDHYHIRELKVGGDLGQVLYHPFDL 112
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD+ +I T+ +NVVINLIG YETRN+SFEDV+ A +A +AK+ + RFI +SC
Sbjct: 113 RDEESIIRTIKYSNVVINLIGSNYETRNFSFEDVHVEGARTLAKLAKQ-CNVERFIHMSC 171
Query: 125 LGASS-------SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWA-QFV 176
L S++ TK E AV E P ATI+RP+ + G +D+ ++ + Q
Sbjct: 172 LNVEEKPTPIILKESSKILKTKWKGELAVKEEFPEATIIRPSVIYGHKDKFISHYMDQNR 231
Query: 177 KKFNFFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
N PL+ G T PV + DV + + A +++ T+ GK Y+ GP + ++EL +
Sbjct: 232 LILNELPLWNKGEKTEKHPVSIHDVISGIVAIVRNSDTA-GKTYQFVGPKQYKLNELVKW 290
Query: 236 MYDT-IREYPHYVKVP----FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDT 290
M+D + + + +K+ P A RE + P L+ + E + + SD
Sbjct: 291 MFDVKFKYFENNIKIVDMKYNPYAWLKTTLREYIYAVHP---TTDMLWEVLECH-HISDK 346
Query: 291 IVSDNAL-TFQDLGIVPHKLK 310
I D+AL T +DLGI P L+
Sbjct: 347 I--DSALPTLEDLGITPIDLQ 365
>gi|86355969|ref|YP_467861.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli CFN 42]
gi|86280071|gb|ABC89134.1| probable NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli CFN 42]
Length = 326
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 161/320 (50%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI ++ N R N
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRN 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I A+ V+N +G +ET +F+ V F A +A A+ G + IS +GA+
Sbjct: 68 SIDRAAEGASHVVNCVGILHETGRNTFDAVQEFGARAVAEAARNAGATL--THISAIGAN 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TK AE A+L P A I RP+ + G ED NK+A + PL G G
Sbjct: 126 TDSDSDYGRTKGRAEAAILSIKPDAVIFRPSIVFGPEDSFFNKFADMARMSPVLPLVGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV A+ D + GKIYELGGP++ + E E+M V
Sbjct: 186 KTKFQPVYVEDVAEAVARAV-DGKVAGGKIYELGGPEVLSFRECLEMMLKVTSRKNPLVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + +PF P D++ D +VS A T + LGI
Sbjct: 245 LPFGLASLIGS----IASLIPFVTPP---ITPDQVRLLKRDNVVSPEAEAEGRTLKGLGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P YL+ YR G
Sbjct: 298 TPTMPASVLGSYLVQYRPHG 317
>gi|383859262|ref|XP_003705114.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Megachile rotundata]
Length = 401
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 171/324 (52%), Gaps = 27/324 (8%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG++ T+FG GF+GRYV +L K+G+Q+++P R LKL GDLGQ++ F+
Sbjct: 55 FSGVVCTIFGCNGFVGRYVCNRLGKIGTQLILPHRCDRYFVLPLKLCGDLGQVLFHPFHL 114
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD+ +I ++ +NVVINLIG TRN++ +DVN A R+A +AK+ + RFI +SC
Sbjct: 115 RDEESIMRSIKYSNVVINLIGASMNTRNFNLKDVNVDGARRLARLAKQ-CNVERFIHVSC 173
Query: 125 LGASS-------SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRL----LNKWA 173
L A + S + TK E AV E P ATI+RP+ + G ED +N W
Sbjct: 174 LNAEEKPKPLMLKNGSEILKTKWQGECAVKEEFPEATIVRPSIIYGQEDNFITHYMNPWR 233
Query: 174 QFVKKFNFFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHEL 232
+ +K PL+ G T QPVYV DVAA +TA + T+ GK Y+ GP + + L
Sbjct: 234 RNMKT---VPLWEGGEKTEKQPVYVGDVAAGITAIATNPETA-GKTYQFVGPKRYKLGTL 289
Query: 233 AELMYDTI-REYPHYVKVP----FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT 287
Y+ R P Y K+ PV E + K PF + L+E +T
Sbjct: 290 INWFYNIASRGLPDYYKIIDMKYNPVFNLKVDLNEFIYKYNPFFSMSWDI--LEE--HHT 345
Query: 288 SDTIVSDNALTFQDLGIVPHKLKG 311
SD ++ T +DLGI P ++
Sbjct: 346 SDKVIP-GVPTLEDLGITPCDMES 368
>gi|209551890|ref|YP_002283807.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|424915879|ref|ZP_18339243.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|209537646|gb|ACI57581.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|392852055|gb|EJB04576.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 326
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 163/320 (50%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI ++ N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRS 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G +ET +F+ V F A +A A+ G + IS +GA+
Sbjct: 68 SIDRAVDGADHVVNCVGILHETGRNTFDAVQEFGARAVAEAARGAGATL--AHISAIGAN 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S TK AE A+L P A I RP+ + G ED NK+A + PL G G
Sbjct: 126 ANSESGYGRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFADMARMSPVLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV A+ D + GK+YELGGP++ + E E+M V
Sbjct: 186 KTKFQPVYVEDVAEAVARAV-DGKVAGGKVYELGGPEVLSFRECLEMMLKVTSRKNPLVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + +PF P D++ D IVS A T + LGI
Sbjct: 245 LPFGIASMIGS----IASLIPFITPP---ITPDQVRMLKHDNIVSREAEAEGRTLKGLGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P YL+ YR G
Sbjct: 298 APTMAASVLGSYLVHYRPHG 317
>gi|89052737|ref|YP_508188.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Jannaschia sp. CCS1]
gi|88862286|gb|ABD53163.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Jannaschia sp. CCS1]
Length = 327
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 167/321 (52%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRY+ +++AK G +V V R ++ +K G +GQ+ P+ N RDD+
Sbjct: 4 LVTIFGGSGFVGRYIARRMAKDGWRVRVAVR-RPNEALFVKPYGVVGQVEPILANIRDDD 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHG-----GIMRFIQIS 123
+++A + ++ V+N +G + N+F A + G A+ G+ RF+ +S
Sbjct: 63 SVRAAIRASDAVVNCVG------TFDVAGKNNFQAVQNEGAARIARIAAEEGVGRFVHMS 116
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
+GA S +K E AVL P A I+RP+ + G ED N++A + P
Sbjct: 117 AIGADVEGRSLYAKSKGQGEAAVLDAFPTAMILRPSVIFGPEDNFFNRFAGMTRLSPVLP 176
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
+ G TR QPVYV DVA A +K G + G IYELGGPD T +L + M IR
Sbjct: 177 VAG-ADTRFQPVYVDDVAQAAQLGVK--GEAHG-IYELGGPDAETFRQLMQRMLGVIRRR 232
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
V +PF VA + + LL K+ L G+ D++ + SD +VSD+A T DLG
Sbjct: 233 RLIVNIPFVVANIMGFSFD-LLSKLTGGLFHNGILTRDQVRSLRSDNVVSDDAQTLADLG 291
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I ++ +YL YR G
Sbjct: 292 IQATAMEAVLEDYLWPYRPSG 312
>gi|68437403|ref|XP_698292.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Danio rerio]
Length = 234
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 117/171 (68%), Gaps = 1/171 (0%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG+ ATVFG TGFLGRYVV +L +MGSQV++P+R + D +L+ MGDLGQI+ M+++P
Sbjct: 53 FSGLAATVFGATGFLGRYVVNRLGRMGSQVVIPYRCDQYDLMYLRPMGDLGQIIFMEWDP 112
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
R+ +I+ ++ +NVVINL+GRE+ET NY +EDV + +IA +E GI +FI +S
Sbjct: 113 RNKESIQRAISHSNVVINLVGREWETSNYKYEDVFVSIPLQIAKATRE-AGIKKFIHMSH 171
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQF 175
L A SPS+ KA EEAV E P A IM+ + + G EDR LN +A
Sbjct: 172 LNADIRSPSKYLRNKAVGEEAVRNEFPDAIIMKASELFGREDRFLNHFANM 222
>gi|296447793|ref|ZP_06889707.1| NAD-dependent epimerase/dehydratase [Methylosinus trichosporium
OB3b]
gi|296254712|gb|EFH01825.1| NAD-dependent epimerase/dehydratase [Methylosinus trichosporium
OB3b]
Length = 334
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 171/325 (52%), Gaps = 12/325 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG + TVFG +GF+GR+VV LA+ G ++ V R D HL+ +G +GQI P++ N R
Sbjct: 8 SGRLVTVFGGSGFIGRHVVGALARDGWRIRVACR-RPDLAFHLQPLGKVGQIFPIQANLR 66
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I A + A+ V+NL+G E SF + H + A E G + F+QIS L
Sbjct: 67 NKASIAAAVKGADAVVNLVGILAEGGKQSFSAL-HAEGAKAVAEAAEAAGAIHFVQISAL 125
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA + S S TKAA E AV P A I RP+ + G ED N++A + F P+
Sbjct: 126 GADAHSTSVYARTKAAGEAAVREAFPAAVIFRPSVVFGPEDDFFNRFATMARYFPVIPVV 185
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G+G TR QPVYV DVA AV A+ D + G YELGGP++ + EL + + +
Sbjct: 186 GEG-TRFQPVYVGDVARAVALAV-DGRAAAGATYELGGPEVKSFRELVQYVLEVTERDRR 243
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTF 299
+ + F K VA+ +I + F L P L ++ D++ D +VS A +T
Sbjct: 244 ILPMSFLAGKKVALITKI-AGALSFGL-FPKLLSMTPDQVELLRHDNVVSAQAKSTGMTL 301
Query: 300 QDLGIVPHKLKGYPTEYLIWYRKGG 324
+ LG+ P ++ YL YRK G
Sbjct: 302 EGLGLAPTAIEAIVPSYLYRYRKTG 326
>gi|406601351|emb|CCH47011.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Wickerhamomyces ciferrii]
Length = 370
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 168/307 (54%), Gaps = 22/307 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G ATVFG +GFLGRY+ +LAK G+ +VPFR E + LK+ GDLG + ++F+ R
Sbjct: 47 TGYTATVFGASGFLGRYLTSKLAKNGTITVVPFRD-ELKSKFLKVPGDLGVVNFVEFDIR 105
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I + +++V NLIG +Y+TRN++ DVN A RIA K+H G+ R + +S
Sbjct: 106 NLESINEAVKYSDIVYNLIGVDYDTRNFTQADVNIEAARRIAQATKDH-GVPRLVHVSSY 164
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A ++ + F+TK +E AV P ATI+RPA M G ED+LLN A+ F F
Sbjct: 165 NADPTADNIFFATKGHSEAAVRAIYPDATIVRPAPMYGREDKLLNVLAEVTSFFT----F 220
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ P +V+DVA A+ DD T+ G+ +EL G + F++ ++ +L+ R
Sbjct: 221 NHNRETLYPAHVLDVATALEKIGFDDSTT-GQTFELYGQEQFSIKQIRDLIEPVTRRDYK 279
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLF--NLDEINAYTSDTIVSDNALTFQDLG 303
+ VP + +LL KV PG + D+IN D + A TF DL
Sbjct: 280 NLNVPKDLG--------LLLSKVL-----PGFLWPSQDQINKKFIDQNIDTTAKTFDDLK 326
Query: 304 IVPHKLK 310
IVP +L+
Sbjct: 327 IVPDRLQ 333
>gi|424873305|ref|ZP_18296967.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393169006|gb|EJC69053.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 326
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 164/321 (51%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G + V R D L+ +G++GQI ++ N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYNIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRS 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G +ET +F+ V F A IA A+ G + IS +GA
Sbjct: 68 SIDRAVDGASHVVNCVGILHETGRNTFDAVQEFGARAIAEAARGAGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TK AE A+L P A I RP+ + G ED NK+A+ + PL G G
Sbjct: 126 AKSDSDYGRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFAEMARMSPILPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYPHYV 247
T+ QPVYV D+A AV A+ D + GK+YELGGP++ + E E M T R P V
Sbjct: 186 KTKFQPVYVEDIAEAVARAV-DGKVAGGKVYELGGPEVLSFRECLETMLKVTCRRNP-LV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +A + + VPF P D++ D +VS A T + LG
Sbjct: 244 SLPFGIASMIGS----IASLVPFITPP---ITPDQVRMLKRDNVVSREAEAEGRTLKGLG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL+ YR G
Sbjct: 297 IAPTMVASVLGSYLVHYRPHG 317
>gi|307942962|ref|ZP_07658307.1| NADH dehydrogenase [Roseibium sp. TrichSKD4]
gi|307773758|gb|EFO32974.1| NADH dehydrogenase [Roseibium sp. TrichSKD4]
Length = 324
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 164/328 (50%), Gaps = 16/328 (4%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
M+ +G + TVFG +GF+GR+V++ LA+ G +V R D HL+ +G GQ + +
Sbjct: 1 MSTALNGKLVTVFGGSGFIGRHVIRALARRGYRVRAAVR-RPDLATHLQPLGTPGQTMAI 59
Query: 61 KFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+ N R +I + + VIN +G T +F+ V F A IA A++ G + +
Sbjct: 60 QANLRYRWSIDRAIEGVDAVINAVGILAPTGKQTFDAVQSFGARAIAEAARDSG-LSSMV 118
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
IS +GA ++S S TKA E AVL LP + I+RP+ + G ED N++A
Sbjct: 119 HISAIGADANSVSEYARTKAEGEAAVLEALPDSVILRPSIVFGPEDNFFNQFAAMSGMAP 178
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
PL G G T QPVYV DVA AV A+ D G +YELGGP+ + E ELM I
Sbjct: 179 ALPLIGGGETLFQPVYVQDVAEAVAQAV-DGKLKAGAVYELGGPEALSFKECLELMLAVI 237
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL--- 297
+ +PFPVA A + K+ LP P L D++ SD IVS+ A
Sbjct: 238 DRKRLLLPIPFPVASA--------MGKIMQMLPSP-LLTADQVELLKSDNIVSEEAAKEG 288
Query: 298 -TFQDLGIVPHKLKGYPTEYLIWYRKGG 324
T + +GI + YL + + G
Sbjct: 289 RTLEGIGIDSSTVAAILPTYLGMFAEHG 316
>gi|359408025|ref|ZP_09200497.1| putative nucleoside-diphosphate sugar epimerase [SAR116 cluster
alpha proteobacterium HIMB100]
gi|356676782|gb|EHI49131.1| putative nucleoside-diphosphate sugar epimerase [SAR116 cluster
alpha proteobacterium HIMB100]
Length = 315
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 163/319 (51%), Gaps = 12/319 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G T+ G TGF+GR + ++L ++V+V R E R LK G +GQ+ + N
Sbjct: 5 AGKTVTLIGGTGFVGRALAEKLLAADARVIVLARNAERAKR-LKTGGAIGQLTAVPGNAL 63
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+D+ + + +A A++VINL+G +F + + RIA +A + I S L
Sbjct: 64 NDDDLLSVIAPADIVINLVGILAAYGRQTFSALQAELPGRIARMATDTQ-TDSVIHFSAL 122
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA+ SPS TKA E A+LR+ P AT+++P+ + G D N++ Q PL
Sbjct: 123 GANLKSPSVYARTKAEGERALLRQFPQATVLQPSIIFGPGDGFFNRFGQMAMIAPALPLI 182
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G GS +QPVYV DVA AV AAL + + G+IY+LGGP ++ EL D +
Sbjct: 183 GGGSGLMQPVYVGDVAGAVLAALTTE-EARGQIYQLGGPQTYSFAELMRFTLDCVGRRRL 241
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ VPF VA A + LP P L LD++ D I +A DLGIV
Sbjct: 242 LLPVPFAVASLPAAFASL--------LPNPPL-TLDQLKLLKVDNICKKSAPGLADLGIV 292
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P ++G YL+ +R GG
Sbjct: 293 PTAIEGVVPAYLMPFRPGG 311
>gi|328545554|ref|YP_004305663.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Polymorphum gilvum
SL003B-26A1]
gi|326415295|gb|ADZ72358.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Polymorphum
gilvum SL003B-26A1]
Length = 324
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 172/328 (52%), Gaps = 16/328 (4%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
MT +G + TVFG +GF+GR+VVQ LA+ G ++ R D HL+ +G +GQI+P+
Sbjct: 1 MTTALNGKLVTVFGGSGFVGRHVVQALARRGYRIRAAVR-RPDLAEHLQPLGAVGQIMPV 59
Query: 61 KFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+ N R ++ + A+ V+NL+G YE+ SF+ V F R A G+
Sbjct: 60 QANLRYRWSVDRAVEGADAVVNLVGILYESGKQSFDSVQAF-GSRAIAEAARAAGLGAVT 118
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
+S +GA SPS +KAA E AVL LP + I+RP+ + G ED N++A +
Sbjct: 119 HVSAIGADPRSPSAYARSKAAGEAAVLETLPDSVILRPSIIFGPEDDFFNRFAAMARLSP 178
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
PL G G TR QPVYV DVAAAV A+ + + G +YELGGP++ + E ELM
Sbjct: 179 VLPLVGGGETRFQPVYVGDVAAAVAKAVDGEARA-GTVYELGGPEVKSFKECLELMLKIT 237
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA---- 296
R + +PF VA+ L ++ LPRP L +D++ SD +VS A
Sbjct: 238 RRQRLLIPLPFGVAE--------LQARILQMLPRP-LLTVDQVRLLKSDNVVSAEAERDG 288
Query: 297 LTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
T LGI P L YL +R+ G
Sbjct: 289 RTLTGLGIAPSTLAAILPTYLERFRQHG 316
>gi|421588315|ref|ZP_16033615.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium sp. Pop5]
gi|403706999|gb|EJZ22117.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium sp. Pop5]
Length = 326
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 160/320 (50%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI ++ N R N
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRN 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ VIN +G +ET +F+ V F +A A+ G + + IS +GA
Sbjct: 68 SIDRAVEGASHVINCVGILHETGRNTFDAVQEFGGRAVAEAARNAGAGL--VHISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TK AE A+ P A I RP+ + G ED NK+A + PL G G
Sbjct: 126 AKSVSDYGRTKGRAEAAIHSIKPDAVIFRPSIVFGPEDSFFNKFADMARMSPVLPLVGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV D+A AV A+ D + GKIYELGGP++ T E E+M V
Sbjct: 186 KTKFQPVYVEDIAEAVARAV-DGKVAGGKIYELGGPEVLTFRECLEMMLKVTNRKNPLVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + +PF P D++ D IVS A T + LGI
Sbjct: 245 LPFGIASMIGS----IASMIPFITPP---ITPDQVRLLKHDNIVSREAEAEGRTLKGLGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P YL+ YR G
Sbjct: 298 TPTMPASVLGSYLVQYRPHG 317
>gi|190889980|ref|YP_001976522.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli CIAT 652]
gi|190695259|gb|ACE89344.1| probable NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli CIAT 652]
Length = 326
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 160/320 (50%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI ++ N R N
Sbjct: 9 LVTLFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISLVQANLRYRN 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G ET +F+ V F A +A A+ G + IS +GA+
Sbjct: 68 SIDRAVDGASHVVNCVGILQETGRNTFDAVQEFGARAVAEAARNAGATL--AHISAIGAN 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S TK AE A+L P A I RP+ + G ED NK+A + PL G G
Sbjct: 126 ANSDSDYGRTKGRAEAAILSIKPDAVIFRPSIVFGPEDSFFNKFADMARMSPVLPLVGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV A+ D GK+YELGGP++ + E E M V
Sbjct: 186 KTKFQPVYVEDVAEAVARAV-DGKVPAGKVYELGGPEVLSFRECLETMLKVTSRKNRLVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + +PF P D++ D +VS A T + LGI
Sbjct: 245 LPFGIASMIGS----IASLIPFVTPP---ITPDQVRLLKRDNVVSAEAESEGRTLKGLGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P YL+ YR G
Sbjct: 298 APTMAASVLESYLVQYRPHG 317
>gi|254477815|ref|ZP_05091201.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ruegeria sp. R11]
gi|214032058|gb|EEB72893.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ruegeria sp. R11]
Length = 329
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 169/316 (53%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ +K G GQ+ P+ N R+D
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMFVKPYGVPGQVEPVLCNIRNDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M A+ V+N +G E +F+ V AERIA IA E G I + +S +GA
Sbjct: 63 SVAAVMQGADAVVNCVGILNEVGKNTFDAVQTEGAERIARIAAEQG-ITNMVHVSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S TKAA E AV + P A I+RP+ + G ED+ N++A + P+
Sbjct: 122 ADGASEYARTKAAGETAVQKHQPNAVILRPSIIFGAEDQFFNRFAGMTRLSPLLPI-AHA 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA A AAL G + +YELGGP++ + L + M D I V
Sbjct: 181 DTKFQPVYVDDVAKAAVAALT--GKAAAGVYELGGPEVKSFGALMQQMLDVINRRRLVVS 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P P+AK VA+ + LL+ V F L + D++ D +VS +A F+DLGI P
Sbjct: 239 LPGPIAKLVALGFD-LLQFVSFQLIENKMLTRDQLKNLKLDNVVSADAKGFEDLGIRPVT 297
Query: 309 LKGYPTEYLIWYRKGG 324
+YL +R G
Sbjct: 298 AGSVLPDYLWKFRPAG 313
>gi|290994340|ref|XP_002679790.1| predicted protein [Naegleria gruberi]
gi|284093408|gb|EFC47046.1| predicted protein [Naegleria gruberi]
Length = 376
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 168/323 (52%), Gaps = 12/323 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ATVFG TGF+GRYVV LA G QV+ P+R E D + + MGD+GQ+V M+F+ + +
Sbjct: 55 VATVFGCTGFVGRYVVAALADAGYQVITPWRRNEFDIVNQRSMGDVGQVVAMRFDLKRYD 114
Query: 69 TIKATMAKANVVINLIGREYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I A++NVVIN IGR+++ N + + N AE I+ KE + RFIQ+S L
Sbjct: 115 SILDICARSNVVINCIGRDHKRIFDNVTVYNSNVESAEIISRACKETN-VDRFIQLSLLN 173
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +S S + K AEEA L TI+R A GTED LN A+ ++ F PL
Sbjct: 174 ADKNSESEYWKQKGLAEEAALSNFDNTTIVRSANAYGTEDGFLNLIAKQIRIFPLIPLTQ 233
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH- 245
G ++QPV+V DV AV + + T +GK EL GP++FT +L + + I E P
Sbjct: 234 KGQAKVQPVFVGDVGRAVARTVLNSRT-VGKTVELAGPEVFTWSQLVDTVARIIDEKPGG 292
Query: 246 YVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
V +P V + V E P + P + D + N + F+DLG+
Sbjct: 293 KVMIPEIVGQLVGYINE--YTHTPGWTSDLPIRMSFDHVLPKEK----PQNVMRFEDLGM 346
Query: 305 VPHKLKGYPTEYLIWYRKGGPKF 327
P L+ E L +R+ F
Sbjct: 347 TPVILEEAALEPLSRWRRKADYF 369
>gi|260948472|ref|XP_002618533.1| hypothetical protein CLUG_01993 [Clavispora lusitaniae ATCC 42720]
gi|238848405|gb|EEQ37869.1| hypothetical protein CLUG_01993 [Clavispora lusitaniae ATCC 42720]
Length = 380
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 172/310 (55%), Gaps = 29/310 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFN 63
+G ATVFG +GFLGRY+ +LAK G+ V+VPFR DD R LK+ GDLG + ++F+
Sbjct: 46 TGYTATVFGASGFLGRYLNSKLAKHGTNVVVPFR---DDMKKRFLKVSGDLGVVNFVEFD 102
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R+ ++I +A +++V N IG +Y T+N+S DVN + ERI KE G R++ +S
Sbjct: 103 ARNLDSIAEAVAHSDIVFNCIGADYWTKNFSIADVNVGITERITKAVKEAGN-PRYVYVS 161
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A SS S ++TK AE+ V LP +TI+RP+ M G ED LLN +K + P
Sbjct: 162 SYNADPSSSSIYYATKGIAEQVVRDILPDSTIVRPSPMFGREDNLLNYLGPKLKMWT--P 219
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY----DT 239
+ I PV+V+DVA A+ DD T +G+ YEL GP+ + E+ ++++ DT
Sbjct: 220 --NKNAKEIYPVHVLDVARALEKIGYDDST-VGQTYELYGPEKLSFLEIRQMIHGITQDT 276
Query: 240 IREYPHY-----VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
+ P +VP +AK VA +++L K P D++ + +
Sbjct: 277 SQVGPFSYNFADYEVPLSLAKGVAQLKQLLYWKQTNP---------DQVQRHLIHQKIDP 327
Query: 295 NALTFQDLGI 304
+A TF DLGI
Sbjct: 328 SAKTFADLGI 337
>gi|304320640|ref|YP_003854283.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Parvularcula
bermudensis HTCC2503]
gi|303299542|gb|ADM09141.1| NADH-ubiquinone oxidoreductase 39 kDa subunit precursor, putative
[Parvularcula bermudensis HTCC2503]
Length = 324
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 162/320 (50%), Gaps = 12/320 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
I TV G +GFLGR+VV++LA G ++ R ++ LK +G LGQI ++ N R+
Sbjct: 5 IVTVLGASGFLGRHVVRELANHGWRIRAAVR-RPNNAHFLKPLGKLGQIDIVQANIRERM 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + AN V+NL+G +FE V A +A +A I + +S +GA
Sbjct: 64 SVAEAVEGANAVVNLVGILAPEGQQTFESVQVQGARNVAEMAA-RADITNVVHVSAIGAD 122
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+S S TKAA E AV +P A I+RP+ + G +D N++A + PL G
Sbjct: 123 PASDSVYARTKAAGEAAVKEAIPGAAILRPSIVFGPQDDFFNRFASMAQMSPVLPLI-SG 181
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QP+YV +VA V AAL DD G+ YELGGP+I T EL +LM I +
Sbjct: 182 QTRFQPIYVDNVADCVAAAL-DDLDLRGRTYELGGPEIMTFKELMQLMLKIIGRRRILLP 240
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIV---SDNAL-TFQDLGI 304
P PVA + ++ + +PF P D++ D +V D L T +D GI
Sbjct: 241 TPLPVASLIGNVGDV-VGSLPFVTPP---LTSDQVKLLRRDNVVGLTKDETLGTIEDFGI 296
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P L+ YL+ YRK G
Sbjct: 297 SPETLEAILPTYLVRYRKQG 316
>gi|116250097|ref|YP_765935.1| NADH-ubiquinone oxidoreductase subunit [Rhizobium leguminosarum bv.
viciae 3841]
gi|115254745|emb|CAK05819.1| putative NADH-ubiquinone oxidoreductase subunit [Rhizobium
leguminosarum bv. viciae 3841]
Length = 326
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 164/321 (51%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G + V R D L+ +G++GQI ++ N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYNIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRS 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G +ET +F+ V F A IA A+ G + IS +GA
Sbjct: 68 SIDRAVDGASHVVNCVGILHETGRNTFDAVQEFGARAIAEAARGAGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TK AE A+L P A I RP+ + G ED NK+A+ + PL G G
Sbjct: 126 VKSDSDYGRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFAEMARMSPILPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYPHYV 247
T+ QPVYV D+A AV A+ D + GK+YELGGP++ + E E M T R+ P V
Sbjct: 186 KTKFQPVYVEDIAEAVARAV-DGKVAGGKVYELGGPEVLSFRECLETMLKVTCRKNP-LV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF VA + + +PF P D++ D +VS A T + LG
Sbjct: 244 SLPFGVASMIGS----IASLIPFITPP---ITPDQVRMLKRDNVVSPEAEAEGRTLKGLG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL+ YR G
Sbjct: 297 IAPTMVASVLGSYLVHYRPHG 317
>gi|321473852|gb|EFX84818.1| hypothetical protein DAPPUDRAFT_300729 [Daphnia pulex]
Length = 395
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 179/329 (54%), Gaps = 18/329 (5%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++G++ATVFG G LG V +L G+Q+++P+RG D LK+ GDLGQ+ +N
Sbjct: 51 FNGVVATVFGANGHLGSVVCNKLGNTGTQLVLPYRGDFYDVAPLKMCGDLGQVYFTPYNL 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D+N+I+ + +N+VIN++GRE+ETRN+SFED+ IA IAKE G+ R I +S
Sbjct: 111 KDENSIRKALKHSNLVINVVGREWETRNFSFEDIYVKGPRTIARIAKE-CGVERMIHVSA 169
Query: 125 LGASS-------SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK 177
L A+ S+ S K E AV E P A I RP+ + G+EDR + +A F +
Sbjct: 170 LNATEKPEPLMLKEGSKFLSAKWRGELAVREEFPEAVIFRPSDIFGSEDRFVTYYAAFWR 229
Query: 178 KFNF-FPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
+ PL+ G I QPV V DVA + A ++ T+ G+IY+ GP + + EL +
Sbjct: 230 RQGAGMPLWKKGEHTIKQPVCVGDVAQGILNAARNIDTN-GQIYQAIGPKRYQLGELVDY 288
Query: 236 MYDTIREYPHYVKVPFPVAKAVAMPREI-LLKKVP-FPLPRPGLFNLDEINAYTSDTIVS 293
+ +R+ + + + A ++ L K+P +P+ G L+ + +D +
Sbjct: 289 FFRVMRKDKEWGYYRYDLRYAPLFWLKVNLTAKLPGWPIANLGWEKLER--DHVTDCV-- 344
Query: 294 DNAL-TFQDLGIVPHKLKGYPTEYLIWYR 321
DN+L T +DLG+ +++ L YR
Sbjct: 345 DNSLPTLEDLGVTLTRIEDRAPWLLKMYR 373
>gi|443731186|gb|ELU16423.1| hypothetical protein CAPTEDRAFT_138749, partial [Capitella teleta]
Length = 391
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 153/252 (60%), Gaps = 22/252 (8%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMK 61
+SGI+ATVFG +GF+G +V +L K+GSQV++P+R C DP R+L+L G+LGQI +
Sbjct: 40 FSGIVATVFGNSGFMGSSMVTRLGKIGSQVILPYR-C--DPYVIRNLRLCGELGQINFVP 96
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
F+ R++ + +M +NVVINLIGR++ET+NY+F DV+ ++A +A++ G+ RFIQ
Sbjct: 97 FDLRNEEDLIKSMKYSNVVINLIGRDWETKNYNFNDVHVEGPRKLASLARKL-GVERFIQ 155
Query: 122 ISCLGASS-------SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLL----N 170
+S L AS S S TK A E AV E P ATI+RP+ M G +D L N
Sbjct: 156 VSHLNASPNPTPILLSKGSEYLKTKWAGEMAVKDEFPEATIIRPSDMYGIDDNFLFYYMN 215
Query: 171 KWAQFVKKFNFFPLFGDGSTRIQ-PVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTV 229
+W + K N L+ G I+ PV V DV + A++D +S GK YE GP + +
Sbjct: 216 RWRRSGK--NKMSLWRKGEQTIKMPVDVRDVTQGIVNAIQDP-SSAGKTYECVGPHPYLL 272
Query: 230 HELAELMYDTIR 241
E+ + ++ IR
Sbjct: 273 SEIIDYLFRIIR 284
>gi|390448505|ref|ZP_10234124.1| NAD-dependent epimerase/dehydratase [Nitratireductor aquibiodomus
RA22]
gi|389665869|gb|EIM77328.1| NAD-dependent epimerase/dehydratase [Nitratireductor aquibiodomus
RA22]
Length = 324
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 166/320 (51%), Gaps = 17/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG GF+GR++VQ L K G +V V R + HL+ +G++GQ+ ++ N R+
Sbjct: 10 LITIFGGNGFVGRHLVQALTKRGHRVRVACRN-PNTAIHLQPLGNVGQVQAVQANLRNRA 68
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VINL+G YE+ SF+ + HF A +A A+ + S +GA
Sbjct: 69 SVDRAVEGADHVINLVGILYESGRQSFDAIQHFGARAVAEAARAA--GAKLTHGSAIGAD 126
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TKA E+AVL + A I+RP+ + G ED N++A + F PL G G
Sbjct: 127 PESDSDYARTKALGEQAVLETVKDAVIIRPSIVFGPEDDFFNRFANMARFSPFLPLIGGG 186
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA A ++ D G+IYELGGP++ + E E M + +V
Sbjct: 187 ETKFQPVYVGDVAEAYARSVDGD-LEGGQIYELGGPEVLSFRECLEEMLEATYRKRWFVS 245
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+P+ VA+ A ++ LP+P + LD++ +D +VS+ A T LGI
Sbjct: 246 LPWFVARIQARILQL--------LPKP-MLTLDQVKLLKTDNVVSEEANAAGRTLDGLGI 296
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
H L YL YR G
Sbjct: 297 QKHSLAAILPTYLWRYRPAG 316
>gi|407972655|ref|ZP_11153568.1| NAD-dependent epimerase/dehydratase [Nitratireductor indicus C115]
gi|407431426|gb|EKF44097.1| NAD-dependent epimerase/dehydratase [Nitratireductor indicus C115]
Length = 324
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 166/320 (51%), Gaps = 17/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG TGF+GR++VQ L K G +V V R + HL +G++GQ+ ++ N R+
Sbjct: 10 LITIFGGTGFIGRHLVQALTKRGYRVRVACRN-PNLAIHLLPLGNVGQVYAVQANLRNRA 68
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I +A ++ VINL+G +E+ SF + +F A +A A+ R S +GA
Sbjct: 69 SIDRAVAGSDHVINLVGILHESGRQSFNVLQNFGARAVAEAARAA--GARLTHGSAIGAD 126
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E+AVL + A I+RP+ + G ED+ N++A + F PL G G
Sbjct: 127 PNSPSDYARTKALGEQAVLETIKDAVIVRPSIVFGPEDKFFNRFANMARFSPFIPLIGGG 186
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA ++ D GKIYELGGP++ T + E M D V
Sbjct: 187 ETKFQPVYVGDVAEVFARSVDGD-LEGGKIYELGGPEVLTFRQCMEQMLDVTCRKRWLVS 245
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLGI 304
VP+ +A+ L ++ LP P L LD++ D +VS+ A T Q LGI
Sbjct: 246 VPWAIAR--------LQGRILGLLPNP-LLTLDQVKLLEKDNVVSEEAAREKRTLQGLGI 296
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
H L YL +R G
Sbjct: 297 AGHSLAAILPMYLWRFRPAG 316
>gi|163794940|ref|ZP_02188909.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [alpha
proteobacterium BAL199]
gi|159179759|gb|EDP64286.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [alpha
proteobacterium BAL199]
Length = 317
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 167/320 (52%), Gaps = 16/320 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH--LKLMGDLGQIVPMKFNP 64
G + TVFG +GF+GR +V++LA G++V C+D R L+ MG +GQI PM+ +
Sbjct: 3 GKLVTVFGASGFVGRNIVRELAARGARVNA---ACQDAERAKFLRTMGSVGQITPMRADV 59
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D ++ + A++VI+L+G Y + +FE V IA A G I +S
Sbjct: 60 TDPASVARAIVGADIVISLVGILYPSGRNTFEAVQETAPGTIAKAAAAAG-ATAMIHVSA 118
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GA S SR TKAA E AV P ATI+RP+ + G +D N++A + PL
Sbjct: 119 IGADPDSRSRYARTKAAGEAAVRAAFPSATILRPSIVFGPDDSFFNRFAAMAQISPVLPL 178
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
FG GST+ QPVYV DVA A A L D + G +ELGGP I+T +L ELM R
Sbjct: 179 FGGGSTKFQPVYVDDVADAALAVL-DRSDAAGATFELGGPTIYTFRQLLELMQAHTRRNR 237
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+ +PF A + E+L VP P+ R D++ D IVS A T DLGI
Sbjct: 238 KLLPLPFWAASLLGGVLELL--PVP-PVTR------DQVELLKRDNIVSAGAKTLADLGI 288
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P ++ Y+ +R GG
Sbjct: 289 EPTPVELILPSYMDKFRVGG 308
>gi|340931882|gb|EGS19415.1| NADH dehydrogenase (ubiquinone)-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 368
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 168/312 (53%), Gaps = 24/312 (7%)
Query: 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
ATVFG TG LGRY+V +LA+ G V+VP+R E RHLK+ GDLG+++ M +
Sbjct: 53 ATVFGATGQLGRYIVNRLARQGCTVIVPYRE-EMAKRHLKVSGDLGRVIFM--------S 103
Query: 70 IKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
I+ ++ ++VV NLIGR+Y T+N+S DV+ ERI ++ + RFIQ+S A+
Sbjct: 104 IEESVRHSDVVYNLIGRDYPTKNFSLADVHIEGTERIVEAVAKYD-VDRFIQVSTYNANP 162
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
S F TK AE+ P TI+RPA M G EDRLL K A LF
Sbjct: 163 DSTCEFFRTKGIAEKVARHVFPETTIVRPAPMFGFEDRLLLKLASVTN------LFTSNH 216
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
R + V +V A+ L DD T+ G+ +EL GP +++ ++AEL+ I + ++ +
Sbjct: 217 MREKFWPVNEVGEALERMLYDDSTA-GQTFELYGPRQYSMAQIAELVDREIYKKRRHINL 275
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
P P+ + +A L+ +V L + D++ D ++ A TF+DLG+ P +
Sbjct: 276 PKPILQPLAE----LINRV---LWWDTGLSRDQVEREFHDQVIDPTAKTFKDLGMEPTDI 328
Query: 310 KGYPTEYLIWYR 321
+ YL+ YR
Sbjct: 329 SKWTYHYLLPYR 340
>gi|424897919|ref|ZP_18321493.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393182146|gb|EJC82185.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 326
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 163/320 (50%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI ++ N R N
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYRIRVGVR-RPDLAGFLQPLGNVGQISFVQANLRYRN 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G +ET +F+ V F +A A+ G + IS +GA+
Sbjct: 68 SIDRAVDGADHVVNCVGILHETGRNTFDAVQEFGGRAVAEAARGAGASL--AHISAIGAN 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S TK AE A+L P A I RP+ + G ED NK+A + PL G G
Sbjct: 126 ANSDSGYGRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFADMARMSPVLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV A+ D + GKIYELGGP++ + E E+M V
Sbjct: 186 KTKFQPVYVEDVAEAVARAV-DGKVAGGKIYELGGPEVLSFRECLEMMLKVTSRKNPLVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + +PF + P D++ D +VS A T + LGI
Sbjct: 245 LPFGIASMIGS----IASMIPF-ITAP--ITPDQVRMLKHDNVVSAEAEAEGRTLKGLGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P YL+ YR G
Sbjct: 298 APTMPASVLGSYLVHYRPHG 317
>gi|389876041|ref|YP_006369606.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Tistrella mobilis
KA081020-065]
gi|388526825|gb|AFK52022.1| NADH-ubiquinone oxidoreductase 39 kDa subunit precursor [Tistrella
mobilis KA081020-065]
Length = 323
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 165/313 (52%), Gaps = 10/313 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGRYVV +LA+ G ++ V R D LK GD+GQI M + D
Sbjct: 8 LVTVFGGSGFLGRYVVARLARTGVRIRVAVRDA-DRALFLKPAGDVGQIAIMSCDVTDAA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++A +A A+ INL G E +F+ V+ A IA A + G+ + +S +GA
Sbjct: 67 QVRAALADASAAINLTGILAEGWGATFDGVHVQGAGNIAKAAAD-AGLGSLVHVSAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TKAA E AV P A I+RP+ + G ED N++A + PL G G
Sbjct: 126 PESSSAYGRTKAAGEAAVREAFPTAVILRPSILFGPEDDFFNRFAGMTRISPALPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPV+VVDVA AV +L D+ G+ +ELGGP +++ ++ E + T+R++ V
Sbjct: 186 QTRFQPVWVVDVAEAVVRSL-DEPEFAGRTFELGGPKVYSFAQILEYILATVRKHRGLVP 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P+ +A VA ++L + PL D++ D +V++ A F GI P
Sbjct: 245 MPWALAGVVARFGDLLPGGMA-PL------TTDQLRMLKRDNVVTEGAEGFAAFGIRPTP 297
Query: 309 LKGYPTEYLIWYR 321
++ +YL YR
Sbjct: 298 VEAVVPDYLARYR 310
>gi|119609245|gb|EAW88839.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa,
isoform CRA_c [Homo sapiens]
Length = 254
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 118/169 (69%), Gaps = 1/169 (0%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 31 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 90
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 91 DKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 149
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
A+ S SR KA E+ V P A I++P+ + G EDR LN +A+
Sbjct: 150 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFAK 198
>gi|332559625|ref|ZP_08413947.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides WS8N]
gi|332277337|gb|EGJ22652.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides WS8N]
Length = 328
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 161/316 (50%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++A+ G +V V R ++ +K G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAQEGWRVRVAVR-RPNEALFVKPYGVVGQVEPVFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M A+ V+N +G E+ F+ V G+ +Q+S +GA
Sbjct: 63 SVRAVMHGADAVVNCVGILAESGKNRFQSVQA-EGAARVARLAAAEGVQTLVQLSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ SPS TKAA E AV P A I+RP+ + G ED N++AQ + P+ G G
Sbjct: 122 AQSPSAYGRTKAAGEAAVREAFPRAVILRPSVIFGPEDDFFNRFAQMTRFSPVLPVVG-G 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
ST+ QPV+V DVA A A + G + YELGGPD+ T +L +++ + V
Sbjct: 181 STKFQPVFVDDVAQAAVAGVL--GRAAPGTYELGGPDVETFRDLMKMLLRVVERRKLIVN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
VPF VA + + L++ F L D++ D IV+ A DLGI P
Sbjct: 239 VPFWVANLIGGALD-LVQTATFGLLANKTLTRDQVRNLRRDNIVAPEAKGLADLGISPTA 297
Query: 309 LKGYPTEYLIWYRKGG 324
++ EYL +R G
Sbjct: 298 MEAVLPEYLWSFRPSG 313
>gi|389690602|ref|ZP_10179495.1| putative nucleoside-diphosphate sugar epimerase [Microvirga sp.
WSM3557]
gi|388588845|gb|EIM29134.1| putative nucleoside-diphosphate sugar epimerase [Microvirga sp.
WSM3557]
Length = 368
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 172/322 (53%), Gaps = 19/322 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
TVFG +GFLGRYVV +LA+ G +VLVP R + + + +G +GQI P+ N R+++++
Sbjct: 14 TVFGGSGFLGRYVVSRLAERGYRVLVPTR--QPNLANFLPLGKVGQINPIHANLRNEDSV 71
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+A+A+ V+NL+G ET F+ + A+ A IA+ G + F +S +GA ++
Sbjct: 72 AHAVARADHVVNLVGILQETGRQRFDALQ---AKAPAMIARLAGKAVSFTHVSAIGADAN 128
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S S +KA E A+L+E P A I+RP+ M G D N++ + PL G T
Sbjct: 129 SESAYARSKAEGEAALLQERPDAVILRPSLMFGPGDSSFNRFGSLARMLPVVPLPG-AET 187
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
R QPVY DVA AV A+ D G++YELGGP+I T+ ++ E + V +P
Sbjct: 188 RFQPVYAGDVAEAVVRAV-DGAVPGGRVYELGGPEIRTMRQMMEFVLQVTERNRPIVPLP 246
Query: 251 FPVAKAVAMPREIL----LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDL 302
F +A+ + L L +P L + D+ +D +VS++A T Q L
Sbjct: 247 FSLARTMGGVLGTLDWLTLGLIPDEL----VTTRDQAILLEADNVVSESAAREGRTLQGL 302
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
G+ P ++ YL+ +R+ G
Sbjct: 303 GLTPTTIEAIVPSYLLRFRRTG 324
>gi|294084810|ref|YP_003551570.1| NAD-dependent epimerase/dehydratase [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664385|gb|ADE39486.1| NAD-dependent epimerase/dehydratase [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 326
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 165/317 (52%), Gaps = 14/317 (4%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
TV G +GF+GR V+ LA+ +V+V R E ++LK MGD+GQI + + +D T+
Sbjct: 17 TVIGGSGFIGRATVEMLARAKMRVIVLCRNAER-AKYLKPMGDVGQITLVSGDALNDETL 75
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ + A+ VIN +G ET + FE + + +I +A+++ + + IS +GA +
Sbjct: 76 ASVIKPADAVINFVGILAETGSQRFEALQGELPGKIGMLARQND-VADVVHISAIGADAD 134
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
SPS TKAA E + E P A I+RP+ + G D N++A PL G G+
Sbjct: 135 SPSLYARTKAAGEAGLHNEFPDAVILRPSIVFGPRDGFFNRFANMALTAPALPLPGGGTM 194
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSM---GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
R+QPVYV DV AA+ A++ T + GK +ELGGPDI++ +L E+ IR +
Sbjct: 195 RMQPVYVGDVVAAIEASIGIGKTKINPRGKFFELGGPDIYSFRQLMEITLLQIRRRRLLI 254
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
VP + A+ + LP P + +D++ D IV+ NAL +GI P
Sbjct: 255 PVPLSLMSFGAIFAGL--------LPSPPI-TVDQVKLLKIDNIVAKNALGLAAMGITPT 305
Query: 308 KLKGYPTEYLIWYRKGG 324
+ YL +R GG
Sbjct: 306 SMDAILPSYLARFRPGG 322
>gi|344300963|gb|EGW31275.1| NADH dehydrogenase 1 alpha subcomplex 9 [Spathaspora passalidarum
NRRL Y-27907]
Length = 384
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 167/308 (54%), Gaps = 25/308 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G TVFG GFLGRYV +LA+ G+ +VPFR + R LK+ GDLG + ++F+ R
Sbjct: 48 NGYTVTVFGAAGFLGRYVTSKLARHGTTTVVPFRN-DMKKRFLKVQGDLGVVNFVEFDSR 106
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +++ ++A ++VVIN IG +Y T+N+S DVN +AERI K+ + R I +S
Sbjct: 107 NLQSVQDSVAHSDVVINCIGADYNTKNFSMADVNIAIAERITQATKD-ANVPRLIHVSSY 165
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S S ++TK E+ V P ATI+RPA M G ED LLN +K + P
Sbjct: 166 NANPKSESVFYATKGIGEQVVKSIYPEATIVRPAPMYGREDNLLNYLGPKIKMWT--P-- 221
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY-- 243
+ + P +V+DVA + A DD T+ GK +EL P+ + E+ +L++ +Y
Sbjct: 222 NRNAKLVYPTHVLDVARGIEAMTFDDSTA-GKTFELYHPEQLSFAEIRQLIHGITEDYSE 280
Query: 244 --PHYVK-----VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA 296
P+ + +P +AK +A ++++ K P D+I + D + +A
Sbjct: 281 VGPYTYRFGDHVIPLQLAKFIAELKQVVFWKQTNP---------DQIQRHLIDQQIDFSA 331
Query: 297 LTFQDLGI 304
TF DLGI
Sbjct: 332 KTFADLGI 339
>gi|239832666|ref|ZP_04680995.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium LMG
3301]
gi|239824933|gb|EEQ96501.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium LMG
3301]
Length = 333
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 164/321 (51%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 77
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L A
Sbjct: 78 SVEHVIKGSDHVVNLVGILSESGRQRFNTVQVLGAKNIAEAAKAAG--IRMTHVSSLAAD 135
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++SPS TKA E+A+L LP + I+RP+ + G EDR N++A + F P G G
Sbjct: 136 ANSPSDYARTKAEGEKAILSVLPDSVILRPSIIFGPEDRFFNRFANMARFSPFLPAIGGG 195
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G +YELGGPD+ M I V
Sbjct: 196 ETKLQPVYVGDVAEAVARAV--DGKLMPGGVYELGGPDVQPFRNWMTDMLGVIARKRLIV 253
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ VA+ L + LP P L N D++ D +VS+ A+ T Q +G
Sbjct: 254 SMPWWVAR--------LQASILGLLPNPMLTN-DQVTLLKFDNVVSEKAIKEGRTLQGMG 304
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 305 ITPESVDAVLPSYLWRYRVAG 325
>gi|225719766|gb|ACO15729.1| NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
precursor [Caligus clemensi]
Length = 421
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 175/332 (52%), Gaps = 22/332 (6%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG +A+VFG TG +G V +L K+GSQ+++P+RG + K+ GDLGQ++ ++
Sbjct: 53 FSGTVASVFGATGLVGTVVCNRLGKIGSQIVIPYRGDHYNYLPFKMCGDLGQVLFTPYHL 112
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+DD +I M ++VVIN +GRE+ET+N+ +ED+N +R+A +AKE G+ RF+ IS
Sbjct: 113 KDDESILKAMKYSDVVINAVGREWETKNFKYEDINIHGPQRLARLAKE-AGVQRFVHISS 171
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK 177
+ A SR TK E AVL P ATI R + + G +D + +A +
Sbjct: 172 INAREKPDKAIIPGGSRWLKTKWQGENAVLEAFPDATIFRASEIYGNQDSFICHYASEAR 231
Query: 178 KFNF----FPLFGDGSTRIQ-PVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHEL 232
+ PL+ G ++ P++V D+ + + AAL DD T G +E GP+ + ++
Sbjct: 232 MSSIQSKGLPLWKKGEHTVKAPIHVGDLVSGIMAALADDSTK-GVTFEAYGPEFHKLSDI 290
Query: 233 AELMYDTI---REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT-S 288
+ MY I EY Y + ++ + +LL+ +P +D++ + S
Sbjct: 291 VDWMYYYINKDEEYFGYRRTDLRFDPSI-FAKAMLLQALPLGQKYFAKLCVDKLEKMSIS 349
Query: 289 DTIVSDNALTFQDLGIVPHKL-KGYPTEYLIW 319
D ++ LT DLG+VP + + P +W
Sbjct: 350 DEVLGLPNLT--DLGVVPGTIAQKMPPHLAVW 379
>gi|126727263|ref|ZP_01743099.1| NADH ubiquinone oxidoreductase, putative [Rhodobacterales bacterium
HTCC2150]
gi|126703472|gb|EBA02569.1| NADH ubiquinone oxidoreductase, putative [Rhodobacterales bacterium
HTCC2150]
Length = 327
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 163/317 (51%), Gaps = 8/317 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRYV +++AK G +V V R D+ +K G +GQ+ P+ N RDD
Sbjct: 4 LVTIFGGSGFVGRYVARRMAKQGWRVRVAVR-RPDEAIFVKPYGTVGQVEPVLANIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M A+ V+N +G E F+ V H AERIA +A I + +S +GA
Sbjct: 63 SVAAAMLGADAVVNCVGILGEVGPNKFDPVQHEGAERIARLAAA-AKIPALVHLSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TKA E VL P A I+RP+ + GTED+ N++A + P+ G G
Sbjct: 122 EDSDSDYLRTKALGEAGVLEHFPCAIILRPSIIFGTEDQFFNRFASMTRMSPILPIAG-G 180
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
+T+ QPVYV DVA AAV L G + G +YELGGP++ L + M I+ +
Sbjct: 181 ATKFQPVYVDDVATAAVKGVL---GQAEGGVYELGGPEVADFRSLMQNMLGVIQRKRIVL 237
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+PF A+ +A + L + + + + ++ A D +V++ A DL I
Sbjct: 238 NLPFFAARLLAGGFD-LAQTLSLGIFTNSILTRQQVRALAHDNVVAEGARGLADLDIQAT 296
Query: 308 KLKGYPTEYLIWYRKGG 324
+ EYL +R G
Sbjct: 297 PMDNVLPEYLWPFRASG 313
>gi|85714023|ref|ZP_01045012.1| NAD-dependent epimerase/dehydratase [Nitrobacter sp. Nb-311A]
gi|85699149|gb|EAQ37017.1| NAD-dependent epimerase/dehydratase [Nitrobacter sp. Nb-311A]
Length = 322
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 170/323 (52%), Gaps = 16/323 (4%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
S + TVFG +GFLGR+VV+ LAK ++ V R E HL+ +G +GQI ++ N R
Sbjct: 5 SDTLVTVFGGSGFLGRHVVRALAKRDYRIRVGVRRPELAG-HLQPLGKVGQIHAVQVNLR 63
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+++A M ++V +NL+G ++ +F+ V R + +S +
Sbjct: 64 HPASVRAAMRGSHVAVNLVGILTKSGRQTFDAV--VAKGAATVAETAAAAGARLVHVSAI 121
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA +S S KA+ E+AVL +P ATI+RP+ M G ED+ N++A PL
Sbjct: 122 GADPTSASAYARAKASGEKAVLAAVPSATILRPSVMFGPEDQFANRFAALALMSPVLPLI 181
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G+T++QPVYV DVA A A+ + G +YELGGP++ ++ E+ +++ I
Sbjct: 182 GGGATQMQPVYVGDVATAAADAVDGKAKA-GAVYELGGPEVLSMREIMQIILRVIERERM 240
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQD 301
V +PF +A+ AM L+ P PL D++ +D +VS+ A LT Q
Sbjct: 241 LVPLPFAIARLKAM----FLQFAPGPLK----LTPDQVELLKTDNVVSNAAIAAGLTLQG 292
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
LGI P ++ +YL +RK G
Sbjct: 293 LGITPDSMEAVVPQYLWRFRKAG 315
>gi|444311599|ref|ZP_21147204.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium M86]
gi|443485029|gb|ELT47826.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium M86]
Length = 328
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 164/321 (51%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 14 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 72
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L A
Sbjct: 73 SVEHVIKGSDHVVNLVGILSESGRQRFNTVQVLGAKNIAEAAKAAG--IRMTHVSSLAAD 130
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++SPS TKA E+A+L LP + I+RP+ + G EDR N++A + F P G G
Sbjct: 131 ANSPSDYARTKAEGEKAILSVLPDSVILRPSIIFGPEDRFFNRFANMARFSPFLPAIGGG 190
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G +YELGGPD+ M I V
Sbjct: 191 ETKLQPVYVGDVAEAVARAV--DGKLMPGGVYELGGPDVQPFRNWMTDMLGVIARKRLIV 248
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ VA+ L + LP P L N D++ D +VS+ A+ T Q +G
Sbjct: 249 SMPWWVAR--------LQASILGLLPNPMLTN-DQVTLLKFDNVVSEKAIKEGRTLQGMG 299
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 300 ITPESVDAVLPSYLWRYRVAG 320
>gi|77464732|ref|YP_354236.1| NADH-ubiquinone oxidoreductase [Rhodobacter sphaeroides 2.4.1]
gi|77389150|gb|ABA80335.1| NADH-ubiquinone oxidoreductase [Rhodobacter sphaeroides 2.4.1]
Length = 328
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 162/316 (51%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++A+ G +V V R ++ +K G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAQEGWRVRVAVR-RPNEALFVKPYGVVGQVEPVFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M A+ V+N +G E+ F+ V G+ +Q+S +GA
Sbjct: 63 SVRAVMHGADAVVNCVGILAESGKNRFQSVQA-EGAARVARIAAAEGVQTLVQLSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ SPS TKAA E AV P A I+RP+ + G ED N++AQ + P+ G G
Sbjct: 122 AQSPSAYGRTKAAGEAAVREAFPRAVILRPSVIFGPEDDFFNRFAQMTRFSPVLPVVG-G 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+T+ QPV+V DVA A A + G + YELGGPD+ T +L +++ + V
Sbjct: 181 ATKFQPVFVDDVAQAAVAGVL--GRAAPGTYELGGPDVETFRDLMKMLLRVVERRKLIVN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
VPF VA + + L++ F L D++ D IV+ +A DLGI P
Sbjct: 239 VPFWVANLIGGALD-LVQTATFGLLANKTLTRDQVRNLRRDNIVAPDAKGLADLGISPTA 297
Query: 309 LKGYPTEYLIWYRKGG 324
++ EYL +R G
Sbjct: 298 MEAVLPEYLWSFRPSG 313
>gi|126463572|ref|YP_001044686.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC
17029]
gi|429207293|ref|ZP_19198552.1| NAD-dependent epimerase/dehydratase [Rhodobacter sp. AKP1]
gi|126105236|gb|ABN77914.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC
17029]
gi|428189668|gb|EKX58221.1| NAD-dependent epimerase/dehydratase [Rhodobacter sp. AKP1]
Length = 328
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 162/316 (51%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++A+ G +V V R ++ +K G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAQEGWRVRVAVR-RPNEALFVKPYGVVGQVEPVFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M A+ V+N +G E+ F+ V G+ +Q+S +GA
Sbjct: 63 SVRAVMHGADAVVNCVGILAESGKNRFQSVQA-EGAARVARLAAAEGVQTLVQLSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ SPS TKAA E AV P A I+RP+ + G ED N++AQ + P+ G G
Sbjct: 122 AQSPSAYGRTKAAGEAAVREAFPRAVILRPSVIFGPEDDFFNRFAQMTRFSPVLPVVG-G 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+T+ QPV+V DVA A A + G + YELGGPD+ T +L +++ + V
Sbjct: 181 ATKFQPVFVDDVAQAAVAGVL--GRAAPGTYELGGPDVETFRDLMKMLLRVVERRKLIVN 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
VPF VA + + L++ F L D++ D IV+ +A DLGI P
Sbjct: 239 VPFWVANLIGGALD-LVQTATFGLLANKTLTRDQVRNLRRDNIVAPDAKGLADLGISPTA 297
Query: 309 LKGYPTEYLIWYRKGG 324
++ EYL +R G
Sbjct: 298 MEAVLPEYLWSFRPSG 313
>gi|399994718|ref|YP_006574958.1| NAD dependent epimerase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398659273|gb|AFO93239.1| putative NAD dependent epimerase [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 329
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 172/316 (54%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ ++K G GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMYVKPYGVPGQVEPVLCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M A+ V+N +G E +F+ V A+RIA IA + G + + +S +GA
Sbjct: 63 SVAAVMQGADAVVNCVGILNELGKNTFDAVQADGADRIARIAADQG-VSTMVHVSAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S +KAA E AVL +P A I+RP+ + G ED+ N++A + P+
Sbjct: 122 QDSDSAYAQSKAAGETAVLTHMPEAVILRPSIIFGAEDQFFNRFAAMTRLSPVLPI-AHA 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA A AAL G + +YELGGP++ + L + M + I +
Sbjct: 181 DTKFQPVYVDDVAKAAVAALL--GQAKPGVYELGGPEVKSFGALMQQMLEVIDRRRLVLS 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P P+AK VA+ ++ ++ V F L + D++ +D +VSD A F +LGI P
Sbjct: 239 LPGPIAKLVALGFDV-MQFVSFQLIENKMLTRDQLKNLEADNVVSDGAKGFDELGIRPVS 297
Query: 309 LKGYPTEYLIWYRKGG 324
L +YL +R G
Sbjct: 298 LASVLPDYLWKFRPSG 313
>gi|299133296|ref|ZP_07026491.1| NAD-dependent epimerase/dehydratase [Afipia sp. 1NLS2]
gi|298593433|gb|EFI53633.1| NAD-dependent epimerase/dehydratase [Afipia sp. 1NLS2]
Length = 321
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 169/322 (52%), Gaps = 21/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LA+ ++ V R E HL+ +G +GQI P++ N R
Sbjct: 8 LVTVFGGSGFLGRHVVRALAQRDYRLRVGVRRPEL-AGHLQPLGKVGQINPVQANIRYPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I+A + A+VV+NL+G E F V+ A IA A + R + +S +GA
Sbjct: 67 SIEAAVRGAHVVVNLVGILSEGGAQRFNRVHAHGAHAIAEAAAKI--GARMVHVSAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+S SR +KA E+AVL +P ATI+RP+ + G ED N++A + PL G
Sbjct: 125 VNSTSRYAVSKAFGEQAVLDAVPGATIIRPSIVFGPEDHFANRFAALARLLPVLPLIG-A 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T++QPVYV DVA A+ A+ D T G YELGGP++ T+ E +L+ P +
Sbjct: 184 DTKLQPVYVGDVATAIADAV-DGKTKPGAAYELGGPEVVTMREAVQLILRIAERDPTLMP 242
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDL 302
+PF +AK K F PG L D++ SD +VSD A LT + L
Sbjct: 243 LPFGLAKL----------KAAFLQFAPGDLKLTPDQVELLKSDNLVSDAARSAGLTLEGL 292
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P + YL +RK G
Sbjct: 293 GIAPESMSAVLPSYLWRFRKTG 314
>gi|221640646|ref|YP_002526908.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides KD131]
gi|221161427|gb|ACM02407.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides KD131]
Length = 324
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 6/314 (1%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
T++G +GF+GRY+ +++A+ G +V V R ++ +K G +GQ+ P+ N RDD ++
Sbjct: 2 TIYGGSGFVGRYIARRMAQEGWRVRVAVR-RPNEALFVKPYGVVGQVEPVFCNIRDDASV 60
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+A M A+ V+N +G E+ F+ V G+ +Q+S +GA +
Sbjct: 61 RAVMHGADAVVNCVGILAESGKNRFQSVQA-EGAARVARLAAAEGVQTLVQLSAIGADAQ 119
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
SPS TKAA E AV P A I+RP+ + G ED N++AQ + P+ G G+T
Sbjct: 120 SPSAYGRTKAAGEAAVREAFPRAVILRPSVIFGPEDDFFNRFAQMTRFSPVLPVVG-GAT 178
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
+ QPV+V DVA A A + G + YELGGPD+ T +L +++ + V VP
Sbjct: 179 KFQPVFVDDVAQAAVAGVL--GRAAPGTYELGGPDVETFRDLMKMLLRVVERRKLIVNVP 236
Query: 251 FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLK 310
F VA + + L++ F L D++ D IV+ +A DLGI P ++
Sbjct: 237 FWVANLIGGALD-LVQTATFGLLANKTLTRDQVRNLRRDNIVAPDAKGLADLGISPTAME 295
Query: 311 GYPTEYLIWYRKGG 324
EYL +R G
Sbjct: 296 AVLPEYLWSFRPSG 309
>gi|154250653|ref|YP_001411477.1| NAD-dependent epimerase/dehydratase [Parvibaculum lavamentivorans
DS-1]
gi|154154603|gb|ABS61820.1| NAD-dependent epimerase/dehydratase [Parvibaculum lavamentivorans
DS-1]
Length = 321
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 174/318 (54%), Gaps = 16/318 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
TVFG +GF+GR++VQ LAK G ++ V R ++ L+ MG +GQ+ P++ N RDD ++
Sbjct: 8 TVFGGSGFVGRHIVQTLAKRGYRIRVAVR-RPNEALFLRPMGVVGQVEPIQANIRDDASV 66
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+A +A A+ V+NL+G +ET +F+ V A R+A A E G R I IS +GA
Sbjct: 67 RAAVAGADAVVNLVGILHETGKQTFDAVQAEGAGRVARAAAEAG-CGRLIHISAIGADEE 125
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S S TKA E+AV +P A I+RP+ + G D N++A + F PL G G+
Sbjct: 126 SASHYGRTKALGEKAVRDAMPDAAIVRPSIVFGPGDSFFNRFAALARLFPALPLIGGGTM 185
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
R+QPVYV DVA V L+ +G S G++YE GGP++ T EL EL I + +P
Sbjct: 186 RLQPVYVKDVAEGVVQILEGEGLS-GRVYEFGGPEVLTFRELMELTRREIGRRTLLLPMP 244
Query: 251 FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGIVP 306
VAK +AM + +P P P D++ T D +VS+ A T Q LG+ P
Sbjct: 245 VWVAKLMAM----FTQFIPNPPLTP-----DQVRLLTIDNVVSEEAKAEGRTLQGLGLAP 295
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ YL +R+ G
Sbjct: 296 TAAEVVLPTYLYRFRRTG 313
>gi|182678291|ref|YP_001832437.1| NADH dehydrogenase (ubiquinone) [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634174|gb|ACB94948.1| NADH dehydrogenase (ubiquinone) [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 336
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 171/327 (52%), Gaps = 11/327 (3%)
Query: 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
V +G + TVFG +GF+GR+VV+ LA+ G +V V R D HL+ G +GQI ++ N
Sbjct: 6 VKTGRLVTVFGGSGFIGRHVVRALARDGWRVRVAAR-RPDLAFHLQPAGQVGQIHAVQAN 64
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R ++ + A+ V+NL+G F + A +A +E GI F+ IS
Sbjct: 65 LRYPQSLALALRNADAVVNLVGIMNPIGKQQFSSIQAEGARALATATRE-AGIHNFVHIS 123
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
+GA+ +S S TKA E A+ LP I RP+ + G ED N++A + P
Sbjct: 124 AIGANPNSSSVYARTKAQGEAAIHEILPEGIIFRPSIVFGPEDNFFNRFAAMARVSPALP 183
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G G T++QPV+V DVA AVTAAL G YELGGP+I ++ ++ E + T
Sbjct: 184 LIGGGKTKLQPVFVGDVAKAVTAALGGA-AKAGTTYELGGPEIRSLRQILEFILATTERQ 242
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----L 297
V +PFP+AK +A+ E L + + F L P +F+L D++ D +VS+ A
Sbjct: 243 RLLVPLPFPIAKLLALGTE-LAESLSFGL-FPSVFSLTRDQVELLRYDNVVSELAKNEGR 300
Query: 298 TFQDLGIVPHKLKGYPTEYLIWYRKGG 324
+ GIVP + YL +RK G
Sbjct: 301 SLAAFGIVPESFETLAPPYLYRFRKAG 327
>gi|118589450|ref|ZP_01546856.1| putative oxidoreductase protein [Stappia aggregata IAM 12614]
gi|118438150|gb|EAV44785.1| putative oxidoreductase protein [Labrenzia aggregata IAM 12614]
Length = 324
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 166/328 (50%), Gaps = 16/328 (4%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
M+ +G + TVFG +GFLGR++VQ LA+ G +V R D HL+ +G +GQI+P+
Sbjct: 1 MSTALNGKLVTVFGGSGFLGRHIVQALARRGYRVRAAVR-RPDLATHLQPLGAVGQIMPV 59
Query: 61 KFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+ N R ++ + A+ V+N +G T SF+ V F R A G+ R
Sbjct: 60 QANLRYRWSVDRAVIGADAVVNAVGILAPTGKQSFDAVQGF-GPRAIAEAARAAGLDRIT 118
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
+S +GA + S S +KA E VL LP + I+RP+ + G ED NK+A +
Sbjct: 119 HVSAIGADAQSTSAYARSKAVGEAGVLETLPDSVILRPSIVFGPEDEFFNKFADMARFSP 178
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
PL G G T+ QPVYV DVA AV ++ D + G YELGGP++ + E + +
Sbjct: 179 VLPLLGGGETKFQPVYVCDVAEAVARSV-DGQLAGGTTYELGGPEVKSFRACLEDVLEVT 237
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA---- 296
R + +PFPV+ A+ +L+ P+ F D++ +D +VS+ A
Sbjct: 238 RRNRVLLPLPFPVSSAMGK----VLQLFPY-----APFTADQVELLKTDNVVSEAAKAEG 288
Query: 297 LTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
T + +GI P + YL YR+ G
Sbjct: 289 RTLEGIGIKPATVAAVLPTYLERYREHG 316
>gi|300122936|emb|CBK23943.2| subunit NDUFA9 [Blastocystis hominis]
Length = 373
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 157/303 (51%), Gaps = 19/303 (6%)
Query: 11 TVFG-TTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
T+FG +TG LGR VV +LA G ++P+RG D+ RHLK GD+G++ P+ F+P D+ +
Sbjct: 41 TIFGASTGNLGRSVVYELASRGVTCMIPYRGEGDEVRHLKQSGDVGKVNPIPFHPLDEKS 100
Query: 70 IKATMAKANVVINLIGREYET------RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
I+ + +++VINL+G+ YET +NY+F+DVN + ER+A I E G + +S
Sbjct: 101 IRDCIGNSDIVINLVGKYYETKNLYLRKNYTFQDVNIYFPERLAKICNEMGKT-NLLHVS 159
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
L + S TKA EE + +P A I+RPA M G +DRLL + + +
Sbjct: 160 ALQQNLKHRSEWARTKAKGEEVLREVMPSACIVRPADMFGEDDRLLTWIGSQLHIYPWLI 219
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
GS QPV++ DVA A+ GK EL GP++ + +L TI
Sbjct: 220 NINGGSALKQPVWMGDVATAIRKYCMTPDAFAGKTMELAGPEVISWADLVAWFQKTIVSS 279
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS--DNALTFQD 301
+ P +A+ A E+ P+P L + E+ +D I+ +TF+D
Sbjct: 280 TKLPRTPTTLARWFAFLLEL--------GPKPYL-SRSEVELRVTDNILDPHTECITFKD 330
Query: 302 LGI 304
LG+
Sbjct: 331 LGV 333
>gi|408376942|ref|ZP_11174545.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Agrobacterium albertimagni AOL15]
gi|407748901|gb|EKF60414.1| NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Agrobacterium albertimagni AOL15]
Length = 326
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 163/320 (50%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G ++ V R D L+ +G++GQI ++ N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRS 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A + A+ V+N +G +E+ F+ V F A +A A+ G + +S +GA
Sbjct: 68 SVDAAVQGADHVVNCVGILFESGRNGFDAVQDFGARAVAEAARSVGATL--THVSAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S +TK AE AV LP A I+RP+ + G ED NK+A + PL G G
Sbjct: 126 AKSDSVYAATKGRAEAAVQSILPDAIILRPSIVFGPEDGFFNKFAAMARIAPALPLVGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA V A+ D + GKIYELGG D+ + + E+M + + V
Sbjct: 186 KTKFQPVYVGDVAEVVARAV-DGSIARGKIYELGGRDVASFKQCLEMMLEIVGRKRALVT 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + VP P D++ D +VS A T + LGI
Sbjct: 245 LPFGIASLIGS----IASAVPLITPP---LTSDQVKLLKKDNVVSAAAKAEGRTLEGLGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + YL+ YR G
Sbjct: 298 QPVTMAAILPTYLVQYRVHG 317
>gi|397614628|gb|EJK62913.1| hypothetical protein THAOC_16455 [Thalassiosira oceanica]
Length = 394
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 167/343 (48%), Gaps = 31/343 (9%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G+ VFG TGFLGRYV L G+ V + RG E RHL+ M +LG+ ++ R
Sbjct: 50 AGVKVAVFGATGFLGRYVCSNLGANGTMVYIGNRGDEFSHRHLRTMFELGRSKFSFYSSR 109
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHF-----------------MAERIAG 108
D ++ +A A+VVINLIG+ Y+T+ + ED N F + +IA
Sbjct: 110 DTQSMADVIADADVVINLIGKYYDTK--ALEDTNKFPYLNYKVSTSIHEANVEVPAKIAE 167
Query: 109 IAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRL 168
+ + + I +S A+ S S K E+ VL+ PWATI+RP + G EDRL
Sbjct: 168 LCTDMQ-VDNLIHVSSAAANPESSSEWARFKYEGEQEVLKAYPWATIVRPTQLFGHEDRL 226
Query: 169 LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFT 228
LN +A F +F F PL G QPV+V DVA A+ + G+ + GP ++
Sbjct: 227 LNWFANFADRFPFVPLVDGGHALTQPVWVDDVARAINRIVDQPEMFEGRRLDCFGPQDYS 286
Query: 229 VHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL---DEINA 285
ELA+ D + P+ V +P V K A +L+ P+ P L NL D +
Sbjct: 287 YAELAKFTNDITGQDPNLVDLPSDVMKYPAR----ILQFEGNPMLTPDLVNLMSEDYLPE 342
Query: 286 YT----SDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
+ ++ + D T +DLG+ ++ +YL +RKGG
Sbjct: 343 LSEEGYANQLQKDKIFTMKDLGVTATPIEKIAFKYLHRFRKGG 385
>gi|306840220|ref|ZP_07472995.1| NADH-ubiquinone oxidoreductase [Brucella sp. BO2]
gi|306846242|ref|ZP_07478804.1| NADH-ubiquinone oxidoreductase [Brucella inopinata BO1]
gi|306273493|gb|EFM55354.1| NADH-ubiquinone oxidoreductase [Brucella inopinata BO1]
gi|306289825|gb|EFM61004.1| NADH-ubiquinone oxidoreductase [Brucella sp. BO2]
Length = 328
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 163/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 14 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 72
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L A
Sbjct: 73 SVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEG--IRMTHLSSLAAD 130
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E AV LP I+RP+ + G EDR N++A + F P+ G G
Sbjct: 131 VNSPSAYARTKAEGEIAVQSVLPDTVILRPSIIFGHEDRFFNRFANMARFSPFLPVIGGG 190
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G IYELGGPD+ + M I V
Sbjct: 191 ETKLQPVYVGDVAEAVARAV--DGKLMPGGIYELGGPDVQPFKAWMQDMLKVIGRKRMIV 248
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ A+ A +L +P P+ P D++ SD +VS+ A+ T Q +G
Sbjct: 249 SMPWWAARLQAS----ILNLLPNPMLTP-----DQVTLLKSDNVVSEQAIKEGRTLQGMG 299
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 300 ITPETVDAILPAYLWRYRVAG 320
>gi|414176690|ref|ZP_11430919.1| hypothetical protein HMPREF9695_04565 [Afipia broomeae ATCC 49717]
gi|410886843|gb|EKS34655.1| hypothetical protein HMPREF9695_04565 [Afipia broomeae ATCC 49717]
Length = 322
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 172/322 (53%), Gaps = 20/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+V++ LAK ++ V R E HL+ +G +GQI ++ N R
Sbjct: 8 LVTVFGGSGFLGRHVIRALAKRDYRIRVGVRRPEL-AGHLQPLGRVGQIHAVQANLRYPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A A+V++NL+G E+ +FE V AE +A A E G R + IS +GA
Sbjct: 67 SVQAAARGASVIVNLVGILSESGAQTFEAVQAKGAEAVARAASEIGA--RVVHISAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S SR KAA E AVL P ATI+RP+ + G ED+ N++A + PL G G
Sbjct: 125 ANSTSRYARAKAAGEAAVLAAAPSATILRPSVVFGPEDQFTNRFAGLARISPVLPLIGGG 184
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T++QPVYV DVA AV A+ D T G YELGGP++ T+ E+ E + V
Sbjct: 185 LTKLQPVYVGDVANAVADAV-DGKTRPGATYELGGPEVMTMREVIEDIVKITYRDTMLVS 243
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDL 302
+PF +AK A F PG L D++ SD +VS+ A LT + L
Sbjct: 244 LPFALAKFQAF----------FLQFAPGDMKLTPDQVELLRSDNVVSEAAKAAGLTLEGL 293
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
G+ P L+ YL YRK G
Sbjct: 294 GVTPDSLEAVAPSYLWRYRKTG 315
>gi|393911229|gb|EJD76220.1| hypothetical protein LOAG_16787 [Loa loa]
Length = 427
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 168/319 (52%), Gaps = 25/319 (7%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG + TVFG TG LG+ ++ +LAK G Q+++P R R LK+ G+LGQ++ + F
Sbjct: 56 FSGNVVTVFGCTGLLGKLLINRLAKEGHQIILPSRQEPYYTRQLKIYGELGQVLLLPFQL 115
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D+ +I+ M +NVV+NLIG ET+NYSFE+ + A RIA IAKE GI +FI +S
Sbjct: 116 KDEESIRQAMRYSNVVVNLIGTRCETKNYSFEETHVEGARRIARIAKEM-GIQKFIHMSA 174
Query: 125 LGASSSSPSRVFS-------TKAAAEEAVLRELPWATIMRPAAMIGTE-DRLLNKW--AQ 174
+ AS ++P +F+ TK EE V E P AT++RP+ M G D +N + Q
Sbjct: 175 MNASKNTPPTLFNKPSQFLLTKGLGEEVVREEFPSATVLRPSMMYGGNYDAFINYFLAIQ 234
Query: 175 FVKKFNFFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELA 233
+ + ++ G T P++V DV+ V + D ++GK YE GP + + EL
Sbjct: 235 RIPHRSVIYVYKKGEHTYKMPIWVGDVSKGVERTIVDPH-AVGKTYEFVGPHCYKLSELI 293
Query: 234 ELMYDTIREYPHYVKVPFPVAKAVAMPREILLK------KVPFPLPR-PGLFNLDEINAY 286
+ MYD ++ FP + L + ++PF L R P +L+ I
Sbjct: 294 DYMYDRA-----HLSSRFPHRRYRRRSLNYLYRAYVAAVELPFKLFRNPPPLSLEWIRVV 348
Query: 287 TSDTIVSDNALTFQDLGIV 305
+ V T +DLG+
Sbjct: 349 ECTSDVLTGCPTLEDLGVT 367
>gi|225629491|ref|ZP_03787524.1| NAD-dependent epimerase/dehydratase [Brucella ceti str. Cudo]
gi|261757227|ref|ZP_06000936.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella sp. F5/99]
gi|225615987|gb|EEH13036.1| NAD-dependent epimerase/dehydratase [Brucella ceti str. Cudo]
gi|261737211|gb|EEY25207.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella sp. F5/99]
Length = 333
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 163/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 77
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L A
Sbjct: 78 SVERVVKGSDHVVNLVGILAESGRQRFNAVQMLGAKHIAEAAKAEG--IRMTHLSSLAAD 135
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E AV LP ++RP+ + G EDR N++A + F P+ G G
Sbjct: 136 VNSPSAYARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMARFSPFLPVIGGG 195
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G IYELGGPD+ + M I V
Sbjct: 196 ETKLQPVYVGDVAEAVARAV--DGKLMPGGIYELGGPDVQPFKAWMQDMLKVIGRKRMIV 253
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ A+ A +L +P P+ P D++ SD +VS+ A+ T Q +G
Sbjct: 254 SMPWWAARLQAS----ILNLLPNPMLTP-----DQVTLLKSDNVVSEQAIKEGRTLQGMG 304
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 305 ITPETVDAILPAYLWRYRVAG 325
>gi|23500763|ref|NP_700203.1| NADH-ubiquinone oxidoreductase [Brucella suis 1330]
gi|376278986|ref|YP_005109019.1| NADH-ubiquinone oxidoreductase, putative [Brucella suis VBI22]
gi|384223546|ref|YP_005614711.1| NADH-ubiquinone oxidoreductase [Brucella suis 1330]
gi|23464418|gb|AAN34208.1| NADH-ubiquinone oxidoreductase, putative [Brucella suis 1330]
gi|343384994|gb|AEM20485.1| NADH-ubiquinone oxidoreductase, putative [Brucella suis 1330]
gi|358260424|gb|AEU08157.1| NADH-ubiquinone oxidoreductase, putative [Brucella suis VBI22]
Length = 328
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 163/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 14 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 72
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L A
Sbjct: 73 SVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEG--IRMTHLSSLAAD 130
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E AV LP ++RP+ + G EDR N++A + F P+ G G
Sbjct: 131 VNSPSAYARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMARFSPFLPVIGGG 190
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G IYELGGPD+ + M I V
Sbjct: 191 ETKLQPVYVGDVAEAVARAV--DGKLMPGGIYELGGPDVQPFKAWMQNMLKVIGRKRMIV 248
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ A+ A +L +P P+ P D++ SD +VS+ A+ T Q +G
Sbjct: 249 SMPWWAARLQAS----ILNLLPNPMLTP-----DQVTLLKSDNVVSEQAIKEGRTLQGMG 299
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 300 ITPETVDAILPAYLWRYRVAG 320
>gi|17988603|ref|NP_541236.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Brucella melitensis
bv. 1 str. 16M]
gi|83269846|ref|YP_419137.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Brucella melitensis
biovar Abortus 2308]
gi|148558780|ref|YP_001257950.1| putative NADH-ubiquinone oxidoreductase [Brucella ovis ATCC 25840]
gi|163845154|ref|YP_001622809.1| hypothetical protein BSUIS_B1036 [Brucella suis ATCC 23445]
gi|189023119|ref|YP_001932860.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella abortus
S19]
gi|225686795|ref|YP_002734767.1| NADH-ubiquinone oxidoreductase [Brucella melitensis ATCC 23457]
gi|256015800|ref|YP_003105809.1| NADH-ubiquinone oxidoreductase [Brucella microti CCM 4915]
gi|261216481|ref|ZP_05930762.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 3 str.
Tulya]
gi|294853993|ref|ZP_06794665.1| NADH-ubiquinone oxidoreductase [Brucella sp. NVSL 07-0026]
gi|297249197|ref|ZP_06932898.1| NADH-ubiquinone oxidoreductase [Brucella abortus bv. 5 str. B3196]
gi|340792803|ref|YP_004758267.1| NADH-ubiquinone oxidoreductase [Brucella pinnipedialis B2/94]
gi|376271538|ref|YP_005114583.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella abortus
A13334]
gi|384213554|ref|YP_005602637.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
M5-90]
gi|384410656|ref|YP_005599276.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
M28]
gi|384447153|ref|YP_005661371.1| NADH-ubiquinone oxidoreductase [Brucella melitensis NI]
gi|423168227|ref|ZP_17154929.1| hypothetical protein M17_01916 [Brucella abortus bv. 1 str. NI435a]
gi|423172338|ref|ZP_17159012.1| hypothetical protein M19_02870 [Brucella abortus bv. 1 str. NI474]
gi|423173931|ref|ZP_17160601.1| hypothetical protein M1A_01328 [Brucella abortus bv. 1 str. NI486]
gi|423175807|ref|ZP_17162473.1| hypothetical protein M1E_00069 [Brucella abortus bv. 1 str. NI488]
gi|423181767|ref|ZP_17168407.1| hypothetical protein M1G_02866 [Brucella abortus bv. 1 str. NI010]
gi|423184900|ref|ZP_17171536.1| hypothetical protein M1I_02868 [Brucella abortus bv. 1 str. NI016]
gi|423188053|ref|ZP_17174666.1| hypothetical protein M1K_02870 [Brucella abortus bv. 1 str. NI021]
gi|423190470|ref|ZP_17177079.1| hypothetical protein M1M_02151 [Brucella abortus bv. 1 str. NI259]
gi|17984404|gb|AAL53500.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Brucella melitensis
bv. 1 str. 16M]
gi|82940120|emb|CAJ13168.1| NADH-ubiquinone oxidoreductase 39 kd subunit [Brucella melitensis
biovar Abortus 2308]
gi|148370065|gb|ABQ62937.1| putative NADH-ubiquinone oxidoreductase [Brucella ovis ATCC 25840]
gi|163675877|gb|ABY39987.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189021693|gb|ACD74414.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella abortus
S19]
gi|225642900|gb|ACO02813.1| NADH-ubiquinone oxidoreductase [Brucella melitensis ATCC 23457]
gi|255998460|gb|ACU50147.1| NADH-ubiquinone oxidoreductase, putative [Brucella microti CCM
4915]
gi|260918088|gb|EEX84949.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 3 str.
Tulya]
gi|294819648|gb|EFG36648.1| NADH-ubiquinone oxidoreductase [Brucella sp. NVSL 07-0026]
gi|297173066|gb|EFH32430.1| NADH-ubiquinone oxidoreductase [Brucella abortus bv. 5 str. B3196]
gi|326411203|gb|ADZ68267.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
M28]
gi|326554494|gb|ADZ89133.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
M5-90]
gi|340561262|gb|AEK56499.1| NADH-ubiquinone oxidoreductase, putative [Brucella pinnipedialis
B2/94]
gi|349745150|gb|AEQ10692.1| NADH-ubiquinone oxidoreductase [Brucella melitensis NI]
gi|363402710|gb|AEW19679.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella abortus
A13334]
gi|374536760|gb|EHR08280.1| hypothetical protein M19_02870 [Brucella abortus bv. 1 str. NI474]
gi|374538720|gb|EHR10227.1| hypothetical protein M17_01916 [Brucella abortus bv. 1 str. NI435a]
gi|374539932|gb|EHR11434.1| hypothetical protein M1A_01328 [Brucella abortus bv. 1 str. NI486]
gi|374546357|gb|EHR17817.1| hypothetical protein M1G_02866 [Brucella abortus bv. 1 str. NI010]
gi|374547200|gb|EHR18659.1| hypothetical protein M1I_02868 [Brucella abortus bv. 1 str. NI016]
gi|374554233|gb|EHR25646.1| hypothetical protein M1K_02870 [Brucella abortus bv. 1 str. NI021]
gi|374556510|gb|EHR27915.1| hypothetical protein M1M_02151 [Brucella abortus bv. 1 str. NI259]
gi|374556607|gb|EHR28011.1| hypothetical protein M1E_00069 [Brucella abortus bv. 1 str. NI488]
Length = 328
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 163/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 14 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 72
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L A
Sbjct: 73 SVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEG--IRMTHLSSLAAD 130
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E AV LP ++RP+ + G EDR N++A + F P+ G G
Sbjct: 131 VNSPSAYARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMARFSPFLPVIGGG 190
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G IYELGGPD+ + M I V
Sbjct: 191 ETKLQPVYVGDVAEAVARAV--DGKLMPGGIYELGGPDVQPFKAWMQDMLKVIGRKRMIV 248
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ A+ A +L +P P+ P D++ SD +VS+ A+ T Q +G
Sbjct: 249 SMPWWAARLQAS----ILNLLPNPMLTP-----DQVTLLKSDNVVSEQAIKEGRTLQGMG 299
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 300 ITPETVDAILPAYLWRYRVAG 320
>gi|261753984|ref|ZP_05997693.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686]
gi|261743737|gb|EEY31663.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686]
Length = 333
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 163/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 77
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L A
Sbjct: 78 SVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEG--IRMTHLSSLAAD 135
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E AV LP ++RP+ + G EDR N++A + F P+ G G
Sbjct: 136 VNSPSAYARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMARFSPFLPVIGGG 195
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G IYELGGPD+ + M I V
Sbjct: 196 ETKLQPVYVGDVAEAVARAV--DGKLMPGGIYELGGPDVQPFKAWMQNMLKVIGRKRMIV 253
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ A+ A +L +P P+ P D++ SD +VS+ A+ T Q +G
Sbjct: 254 SMPWWAARLQAS----ILNLLPNPMLTP-----DQVTLLKSDNVVSEQAIKEGRTLQGMG 304
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 305 ITPETVDAILPAYLWRYRVAG 325
>gi|407778085|ref|ZP_11125351.1| NAD-dependent epimerase/dehydratase [Nitratireductor pacificus
pht-3B]
gi|407300117|gb|EKF19243.1| NAD-dependent epimerase/dehydratase [Nitratireductor pacificus
pht-3B]
Length = 324
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 166/321 (51%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GR++VQ L + G +V V R + HL+ +G++GQ+ ++ N R+
Sbjct: 10 LVTIFGGSGFVGRHLVQALTRRGYRVRVACRN-PNLAMHLQPLGNVGQVHAVQANLRNRA 68
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ V+NL+G +E+ +F+ V F A +A A+ Q S +GA
Sbjct: 69 SVDRAVEGADHVVNLVGILHESGRQTFDAVQDFGARAVAEAARAA--GAGLTQGSAIGAD 126
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TKA E+A L + A I+RP+ + G ED+ N++A + F PL G G
Sbjct: 127 ADSVSDYARTKALGEQAALETVKDAVIIRPSIIFGPEDQFFNRFANMARFSPFLPLIGGG 186
Query: 189 STRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
TR QPVYV DVA ++ DGT GK+YELGGP++ T E E M + I +V
Sbjct: 187 ETRFQPVYVGDVAEVYARSV--DGTLKGGKVYELGGPEVLTFRECMEQMLEVIHRKRWFV 244
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ VA+ +L K+P L LD++ D +VS+ A T LG
Sbjct: 245 SIPWSVARLQGR----ILGKLP-----GHLLTLDQVEQLRHDNVVSEAAAKDKRTLAGLG 295
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I H L YL +R G
Sbjct: 296 IAQHSLAAMLPAYLWRFRPAG 316
>gi|237817411|ref|ZP_04596403.1| NAD-dependent epimerase/dehydratase [Brucella abortus str. 2308 A]
gi|260545103|ref|ZP_05820924.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella abortus
NCTC 8038]
gi|260565084|ref|ZP_05835569.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
bv. 1 str. 16M]
gi|260756217|ref|ZP_05868565.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 6 str.
870]
gi|260760414|ref|ZP_05872762.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 4 str.
292]
gi|260763654|ref|ZP_05875986.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 2 str.
86/8/59]
gi|260882041|ref|ZP_05893655.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 9 str.
C68]
gi|261220849|ref|ZP_05935130.1| NAD-dependent epimerase/dehydratase [Brucella ceti B1/94]
gi|261312908|ref|ZP_05952105.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis
M163/99/10]
gi|261318303|ref|ZP_05957500.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis B2/94]
gi|261322738|ref|ZP_05961935.1| NAD-dependent epimerase/dehydratase [Brucella neotomae 5K33]
gi|261750729|ref|ZP_05994438.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513]
gi|265986101|ref|ZP_06098658.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis
M292/94/1]
gi|265990330|ref|ZP_06102887.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992563|ref|ZP_06105120.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 3 str.
Ether]
gi|265995795|ref|ZP_06108352.1| NAD-dependent epimerase/dehydratase [Brucella ceti M490/95/1]
gi|265998997|ref|ZP_05464603.2| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
bv. 2 str. 63/9]
gi|237788224|gb|EEP62440.1| NAD-dependent epimerase/dehydratase [Brucella abortus str. 2308 A]
gi|260098374|gb|EEW82248.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella abortus
NCTC 8038]
gi|260152727|gb|EEW87820.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
bv. 1 str. 16M]
gi|260670732|gb|EEX57672.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 4 str.
292]
gi|260674075|gb|EEX60896.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 2 str.
86/8/59]
gi|260676325|gb|EEX63146.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 6 str.
870]
gi|260871569|gb|EEX78638.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 9 str.
C68]
gi|260919433|gb|EEX86086.1| NAD-dependent epimerase/dehydratase [Brucella ceti B1/94]
gi|261297526|gb|EEY01023.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis B2/94]
gi|261298718|gb|EEY02215.1| NAD-dependent epimerase/dehydratase [Brucella neotomae 5K33]
gi|261301934|gb|EEY05431.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis
M163/99/10]
gi|261740482|gb|EEY28408.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513]
gi|262550092|gb|EEZ06253.1| NAD-dependent epimerase/dehydratase [Brucella ceti M490/95/1]
gi|262763433|gb|EEZ09465.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 3 str.
Ether]
gi|263000999|gb|EEZ13689.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 1 str.
Rev.1]
gi|263091761|gb|EEZ16092.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Brucella melitensis
bv. 2 str. 63/9]
gi|264658298|gb|EEZ28559.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis
M292/94/1]
Length = 333
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 163/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 77
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L A
Sbjct: 78 SVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEG--IRMTHLSSLAAD 135
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E AV LP ++RP+ + G EDR N++A + F P+ G G
Sbjct: 136 VNSPSAYARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMARFSPFLPVIGGG 195
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G IYELGGPD+ + M I V
Sbjct: 196 ETKLQPVYVGDVAEAVARAV--DGKLMPGGIYELGGPDVQPFKAWMQDMLKVIGRKRMIV 253
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ A+ A +L +P P+ P D++ SD +VS+ A+ T Q +G
Sbjct: 254 SMPWWAARLQAS----ILNLLPNPMLTP-----DQVTLLKSDNVVSEQAIKEGRTLQGMG 304
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 305 ITPETVDAILPAYLWRYRVAG 325
>gi|13474330|ref|NP_105898.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [Mesorhizobium
loti MAFF303099]
gi|14025082|dbj|BAB51684.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [Mesorhizobium
loti MAFF303099]
Length = 341
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 159/320 (49%), Gaps = 17/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ VFG +GF+GR+VV+ LAK G ++ V R D HL+ +G++GQI P++ N R
Sbjct: 26 LVVVFGGSGFVGRHVVRALAKRGYRIRVACR-RPDLAGHLQPLGNVGQIQPVQANVRVRW 84
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ V+NL+ +ET F V+ F + +A A+ G + IS LGA
Sbjct: 85 SVDRAVQGADHVVNLVAILHETGRQKFSAVHEFGSRAVAEAARSVGAGL--THISALGAD 142
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TKA E+AVL +P A I RP+ G ED N++A + PL G G
Sbjct: 143 LDSESDYARTKALGEKAVLETIPDAVIFRPSINFGPEDSFFNRFASMARYSPVLPLIGGG 202
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV ++ D G+IYELGGP++ T E E + I V
Sbjct: 203 QTKFQPVYVGDVAEAVARSV-DGKIDRGQIYELGGPNVLTFKECMEELLTVIERKRLLVP 261
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLGI 304
VP+ VA A +L +P P L D++ IVS+ A T LGI
Sbjct: 262 VPWWVANIQAS----ILGLLPNP-----LLTKDQVMQLREHNIVSEAAAKANRTLAGLGI 312
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + YL +R G
Sbjct: 313 QPQSIATILPSYLWRFRAAG 332
>gi|400592529|gb|EJP60707.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Beauveria bassiana
ARSEF 2860]
Length = 365
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 169/315 (53%), Gaps = 25/315 (7%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V++PFR E RHLK+ GDLG++V ++++ R+
Sbjct: 48 GHTATVFGATGQLGRYIVNRLARQGCTVVIPFRE-EMAKRHLKVTGDLGRVVFIEYDLRN 106
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+A++ ++VV NL GR+Y T+N+S D++ +RI + + R+I +S
Sbjct: 107 IASIEASVRHSDVVYNLTGRDYPTKNFSLADLHVEGTQRIVDAVARY-DVDRYIHVSSHN 165
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+S S S F+TK EE P TI+RPA + G ED LL K A + F
Sbjct: 166 ANSESASEFFATKGRGEEVARSIFPETTIVRPAPIFGFEDSLLLKLASVLNLFT----AN 221
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ + PV++ L DD T+ G+ +EL GP +++ ++AE++ I + +
Sbjct: 222 NMREKFWPVHM----------LYDDSTA-GQTFELYGPKQYSMAQIAEMVDKEIFKQRRH 270
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P KA+ P +L K + + DE+ D ++ A TF+DLGI P
Sbjct: 271 INIP----KAILKPVAGVLNKALW----WHTLSADEVEREFIDQVIDPEARTFKDLGIEP 322
Query: 307 HKLKGYPTEYLIWYR 321
+ + YL +R
Sbjct: 323 GDIANFTYHYLQGFR 337
>gi|153008671|ref|YP_001369886.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi ATCC
49188]
gi|151560559|gb|ABS14057.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi ATCC
49188]
Length = 328
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 163/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R+
Sbjct: 14 LVTVFGGSGFVGRAVVASLTKRGYRVRVAVRKPEV-AYYMAPLGNVGQIQMVQANVRNRA 72
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L A
Sbjct: 73 SVEHVVKGSDHVVNLVGILAESGRQRFNTVQVLGAKNIAEAAKAAG--IRMTHLSSLAAD 130
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TK E AVL LP + I+RP+ + G EDR N++A + F P G G
Sbjct: 131 VNSPSDYARTKGEGENAVLSVLPESVILRPSIIFGPEDRFFNRFANMARFSPFLPAIGGG 190
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G +YELGGPD+ + M I +
Sbjct: 191 ETKLQPVYVGDVAEAVARAV--DGKLMPGGVYELGGPDVQPFKNWMKDMLGVIARKRLII 248
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ VA+ L + LP P L N D++ D IVS+ A+ T + +G
Sbjct: 249 SMPWWVAR--------LQASILGLLPNPMLTN-DQVTLLKFDNIVSEKAIKEGRTLEGMG 299
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 300 ITPEGVDAVLPSYLWRYRVAG 320
>gi|114798702|ref|YP_758824.1| putative NADH-quinone oxidoreductase [Hyphomonas neptunium ATCC
15444]
gi|114738876|gb|ABI77001.1| putative NADH-quinone oxidoreductase [Hyphomonas neptunium ATCC
15444]
Length = 329
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 164/301 (54%), Gaps = 8/301 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+ G +GF+GRY + L + G +V V R + ++L G G + ++ N RD
Sbjct: 5 LVTLVGGSGFIGRYAARALVEKGWRVRVACRRVHN-AIDVRLAGPPGWVDVVQANIRDRA 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + A+ V+NL+G +E +FE A +A +A+E G I RF+QIS +GA
Sbjct: 64 SLERAVDGADAVVNLVGILFEHARQTFEGAQTDGAALLAEVAREKG-IKRFVQISAIGAD 122
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TKAAAEEAV P A I+RP+ + G ED+ N++A + F P G G
Sbjct: 123 PDSRSPYGRTKAAAEEAVRERFPSAVILRPSIVFGPEDQFFNRFANMARFVPFMPAIGGG 182
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVY DVAAA+ A++ + + G+ +ELGGP ++ +EL +++ I +
Sbjct: 183 KTKFQPVYAGDVAAAIAGAVERE-DAAGRTFELGGPRSYSFNELYDIILKMIDRPRFKIP 241
Query: 249 VPFPVAKAVAMPREILLKKV-PFP---LPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+PF VA+ +A + + + PF L P L ++ D +VSD AL +DLG+
Sbjct: 242 LPFFVARPMAYISGAVWRHIPPFSWGLLGDPPLTG-SQVEMLAYDNVVSDGALGIRDLGV 300
Query: 305 V 305
+
Sbjct: 301 L 301
>gi|327308948|ref|XP_003239165.1| NADH-ubiquinone oxidoreductase subunit [Trichophyton rubrum CBS
118892]
gi|326459421|gb|EGD84874.1| NADH-ubiquinone oxidoreductase 39 kDa subunit [Trichophyton rubrum
CBS 118892]
Length = 376
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 168/317 (52%), Gaps = 24/317 (7%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V+VP+R E RHLK+ GDLG++V M+++ R+
Sbjct: 58 GHTATVFGATGFLGRYIVNRLARQGCTVIVPYRE-EMTKRHLKVTGDLGRVVFMEYDLRN 116
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ +++V NLIGR Y T+N+S+ED++ ERI ++ + R++ +S
Sbjct: 117 TQSIEESVRHSDIVYNLIGRNYPTKNFSYEDIHVEGTERIVESVAKY-DVDRYVHVSSYN 175
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A + +E TI+RPA M G EDRLL++ A F +
Sbjct: 176 ARPRLKVKTLQDPFFSE---------TTIVRPAPMFGFEDRLLHRLAGVTNIFTSNHM-- 224
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+ +DV A+ L ++ T+ + +EL GP ++ E++EL+ I + +
Sbjct: 225 --QERYWPVHAIDVGRALEIMLMEEWTT-AQTFELYGPKNYSTKEISELVDREIIKKRRH 281
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP KA+ P L ++ L P + + DE+ D + A TF+DLGI P
Sbjct: 282 INVP----KAIMKPAAYWLNRL---LWWP-ITSADEVEREFIDQQIDPTAKTFKDLGIEP 333
Query: 307 HKLKGYPTEYLIWYRKG 323
L YL+ YR
Sbjct: 334 TDLNTLTFHYLLGYRSS 350
>gi|242005047|ref|XP_002423386.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, putative [Pediculus
humanus corporis]
gi|212506430|gb|EEB10648.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, putative [Pediculus
humanus corporis]
Length = 400
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 137/238 (57%), Gaps = 12/238 (5%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP--RHLKLMGDLGQIVPMKF 62
++G + T+FG TGFLGRY+ QL K G+Q+++P+R DD ++LKLMGDLGQI+ F
Sbjct: 46 FNGNVVTIFGATGFLGRYICNQLGKRGAQIIIPYRCDPDDQSLKNLKLMGDLGQILFQPF 105
Query: 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
+ +D +I+ + +NVVINLIGR YET+N+S+ V+ A IA +EH + R I
Sbjct: 106 DLKDPVSIRKAVKYSNVVINLIGRIYETKNFSYHQVHVMGAAEIAKACREH-NVERLIHF 164
Query: 123 SCLGASSSSPSRVFS------TKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFV 176
S L + VF +K E AV+ E P ATI RP+ + G ED L
Sbjct: 165 STLNVNKDPNQYVFKKINFNPSKLQGEIAVMEEFPDATIFRPSCVYGKEDDFLRPLFTLR 224
Query: 177 KK-FNFFPLFGDGSTRIQ-PVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHEL 232
++ F PL+ G I+ PV+ D++ AV A+ D+ GKI + GP+ + +H+L
Sbjct: 225 RQTFQRIPLYAKGKKTIKCPVFAPDISRAVVLAI-DNYDMRGKIIQAVGPERYYLHDL 281
>gi|430006196|emb|CCF21999.1| putative NADH dehydrogenase/NADH dehydrogenase (Ubiquinone) protein
[Rhizobium sp.]
Length = 326
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 164/321 (51%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G ++ V R D L G +GQI ++ N R
Sbjct: 9 LVTVFGGSGFVGRHVVRSLVKRGYRIRVAVR-RPDLAGFLLPYGYVGQIALVQANLRYRY 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ V+N +G +E+ SF V F +A A+ + + +S +GA
Sbjct: 68 SVDRAVEGASFVVNCVGILFESGRNSFNAVQDFGGRAVAEAARAA--GAKLVHVSAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S +K AE A+L +P A I+RP+ + G ED NK+A K F PL G G
Sbjct: 126 RDSDSSYAQSKGRAEAAILDTVPDAVILRPSIVFGPEDSFFNKFAGMAKMFPALPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T+ QPVYV DVA AV AL DG G+IYELGGP++ T E E++ T +
Sbjct: 186 KTKFQPVYVEDVAKAV--ALGVDGVIPGGRIYELGGPEVLTFRECMEIVLRTTARKRPLI 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+PFP+A + ++ PL +P + + D++ D +VS+ A+ T + +G
Sbjct: 244 SLPFPIASMIGSVASLI------PLIKPPITS-DQVALLKKDNVVSEEAIRDGRTLEGMG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P L YL+ YR G
Sbjct: 297 IRPTHLTSVVPSYLVQYRPQG 317
>gi|265984865|ref|ZP_06097600.1| NAD-dependent epimerase/dehydratase [Brucella sp. 83/13]
gi|264663457|gb|EEZ33718.1| NAD-dependent epimerase/dehydratase [Brucella sp. 83/13]
Length = 333
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 162/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 77
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V + IA AK G +R +S L A
Sbjct: 78 SVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGTKHIAEAAKAEG--IRMTHLSSLAAD 135
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E AV LP I+RP+ + G EDR N++A + F P+ G G
Sbjct: 136 VNSPSAYARTKAEGEIAVQSVLPDTVILRPSIIFGHEDRFFNRFANMARFSPFLPVIGGG 195
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G IYELGGPD+ + M I V
Sbjct: 196 ETKLQPVYVGDVAEAVVRAV--DGKLMPGGIYELGGPDVQPFKAWMQDMLKVIGRKRMIV 253
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ A+ A +L +P P+ P D++ SD +VS+ A+ T Q +G
Sbjct: 254 SMPWWAARLQAS----ILNLLPNPMLTP-----DQVTLLKSDNVVSEQAIKEGRTLQGMG 304
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 305 ITPETVDAILPAYLWRYRVAG 325
>gi|385302183|gb|EIF46327.1| putative mitochondrial complex 40kd subunit [Dekkera bruxellensis
AWRI1499]
Length = 395
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 171/321 (53%), Gaps = 23/321 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G +VFG +GFLGR + +LAK G+ V+ P+R RHLK+ GDLG + +++ R
Sbjct: 47 TGYTVSVFGGSGFLGRIITSKLAKHGTLVVAPWRNSRS-MRHLKVNGDLGVVNYHEWDLR 105
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I+ ++A A+VVINL+G E T+N+S D N + RIA AK++ G+ RFIQ+S
Sbjct: 106 NVRSIEESVAHADVVINLVGSELNTKNFSMADANIEGSRRIAEAAKKY-GVDRFIQVSSY 164
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S S F+TK E+ V P ATI+RPA M G LL++ K L
Sbjct: 165 NANPKSESEFFATKGVGEQVVKEIYPDATIVRPAPMYGRNSALLHELVPLTK------LG 218
Query: 186 GDGSTR--IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
G+ R I P + VA A+ + DD T +GK YEL GP+ ++ EL E++ +Y
Sbjct: 219 GNVLFRQEIYPTHGRQVAEALEKIVFDDST-LGKTYELYGPERYSKRELREMI-----KY 272
Query: 244 PHYVKV--PFPVAKAVAMPREILLKKVPFPL-----PRPGLFNLDEINAYTSDTIVSDNA 296
++ + FP A ++P KV L P N+D T D ++ +A
Sbjct: 273 MTHIGMYGYFPAATGFSIPAPRSFMKVWCWLNEKFNPSMESVNMDTYRRSTIDQVIDPSA 332
Query: 297 LTFQDLGIVPHKLKGYPTEYL 317
LT++DLG+ L + Y+
Sbjct: 333 LTYEDLGMKADDLADWLYSYV 353
>gi|306837551|ref|ZP_07470423.1| NADH-ubiquinone oxidoreductase [Brucella sp. NF 2653]
gi|306407335|gb|EFM63542.1| NADH-ubiquinone oxidoreductase [Brucella sp. NF 2653]
Length = 328
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 162/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 14 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 72
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V + IA AK G +R +S L A
Sbjct: 73 SVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGTKHIAEAAKAEG--IRMTHLSSLAAD 130
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E AV LP I+RP+ + G EDR N++A + F P+ G G
Sbjct: 131 VNSPSAYARTKAEGEIAVQSVLPDTVILRPSIIFGHEDRFFNRFANMARFSPFLPVIGGG 190
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G IYELGGPD+ + M I V
Sbjct: 191 ETKLQPVYVGDVAEAVVRAV--DGKLMPGGIYELGGPDVQPFKAWMQDMLKVIGRKRMIV 248
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ A+ A +L +P P+ P D++ SD +VS+ A+ T Q +G
Sbjct: 249 SMPWWAARLQAS----ILNLLPNPMLTP-----DQVTLLKSDNVVSEQAIKEGRTLQGMG 299
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 300 ITPETVDAILPAYLWRYRVAG 320
>gi|110635928|ref|YP_676136.1| NAD-dependent epimerase/dehydratase [Chelativorans sp. BNC1]
gi|110286912|gb|ABG64971.1| NAD-dependent epimerase/dehydratase [Chelativorans sp. BNC1]
Length = 323
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 159/320 (49%), Gaps = 17/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV L + G +V V R + +G +GQ+ ++ N R
Sbjct: 10 LVTVFGGSGFVGRHVVLALTRRGYRVRVACRNPHTAI-FVNTLGTMGQVHAVQANIRYRW 68
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VINL+G E+ F+ V A +A A+ G F Q S +GA
Sbjct: 69 SVDRAVHGADHVINLVGILQESGRQRFDAVQAIGARTVAEAARSVGA--GFTQASAIGAD 126
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E+AVL + A I+RP+ + GTED+ N++A + PL G G
Sbjct: 127 LNSPSAYGRTKAEGEQAVLETVKNAVIIRPSIIFGTEDKFFNRFANMARFSPVLPLIGGG 186
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPVYV DV A V A D G YELGGP + T E E + + I ++
Sbjct: 187 QTRFQPVYVGDV-AEVYARSVDGVLKPGATYELGGPQVLTFRECMEEILEVIERRRAFIS 245
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+P+P+A+ L ++ LP+P L LD++ D +VS+ A LT + L I
Sbjct: 246 IPWPLAR--------LQARILGLLPKP-LLTLDQVRMLAVDNVVSEEAKKRGLTLEGLKI 296
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
L YL YR G
Sbjct: 297 PQRTLAAILPTYLWTYRPAG 316
>gi|217976348|ref|YP_002360495.1| NADH dehydrogenase (ubiquinone) [Methylocella silvestris BL2]
gi|217501724|gb|ACK49133.1| NADH dehydrogenase (ubiquinone) [Methylocella silvestris BL2]
Length = 335
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 162/321 (50%), Gaps = 9/321 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+A VFG +GF+GR+VV+ LAK G +V V R D HL+ +G++GQI ++ N R +
Sbjct: 11 LAVVFGGSGFIGRHVVRALAKDGWRVRVASR-RPDLAFHLQPLGNVGQIHAVQANLRYPD 69
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I+ + A+ +N +G +F D H A + G+ F+QIS +GA
Sbjct: 70 SIERALRGADAAVNCVGILSPAGEQTF-DAIHASGAEAIAKAAKAAGVKSFVQISAIGAD 128
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+S S TKA E V P A I+RP+ + G ED N++A + PL G G
Sbjct: 129 DASASAYAKTKAQGEALVAAAFPGAVILRPSVVFGPEDEFFNRFAAMARFMPVLPLIGGG 188
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPV+V DVA A AAL DG + G IYELGGP++ T+ + E + V
Sbjct: 189 ETKLQPVFVGDVARA--AALALDGKAKPGAIYELGGPEVATMRRIMEFVLKVTERKRRLV 246
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+ F A++V E+L K LP+ D++ D +VS A+ T Q LG
Sbjct: 247 TLSFDQARSVGGVTEVLSKLSLGLLPKMFEITRDQVELLKHDNVVSKAAIVEGRTLQGLG 306
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
+ P + + YL YR G
Sbjct: 307 LAPESFEAFTPTYLTRYRATG 327
>gi|359787899|ref|ZP_09290886.1| NAD-dependent epimerase/dehydratase [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359256300|gb|EHK59165.1| NAD-dependent epimerase/dehydratase [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 324
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 157/320 (49%), Gaps = 17/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VVQ LA+ G +V V R HL+ +G++GQI P++ N R
Sbjct: 10 LVTVFGGSGFLGRHVVQALARRGYRVRVASR-RPHLAGHLQPLGNVGQIQPIQANLRVRW 68
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ V+NL+G YE+ F V A +A A G + +S LGA
Sbjct: 69 SVDRAVQGADHVVNLVGILYESGRQKFSAVQDLGARAVAEAAHSAGAGL--THVSALGAD 126
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ TKA E AVL +P A I RP+ M G ED N++A + PL G G
Sbjct: 127 IDGEAVYAKTKARGEAAVLETVPDAVIYRPSIMFGPEDGFFNRFANMARFSPVLPLIGGG 186
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+T+ QPVYV DVA A+ ++ D G IYELGGP I + + E M +TI V
Sbjct: 187 ATKFQPVYVGDVAEAIARSV-DGQVKGGTIYELGGPRIMSFRQCMEQMLETIGRKRLLVP 245
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
VP+ +A+ L + LP+P L D++ +D IVS A T LGI
Sbjct: 246 VPWWLAR--------LQGAILGMLPKP-LLTRDQVTLLKTDNIVSAEAEAERRTLAALGI 296
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
YL YR G
Sbjct: 297 QGRSTAAILPTYLWRYRPAG 316
>gi|404318468|ref|ZP_10966401.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi CTS-325]
Length = 328
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 163/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R+
Sbjct: 14 LVTVFGGSGFVGRGVVASLTKCGYRVRVAVRKPEV-AYYMAPLGNVGQIQMVQANVRNRA 72
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L A
Sbjct: 73 SVEHVVKGSDHVVNLVGILAESGRQRFNTVQVLGAKNIAEAAKAAG--IRMTHLSSLAAD 130
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TK E AVL LP + I+RP+ + G EDR N++A + F P G G
Sbjct: 131 VNSPSDYARTKGEGENAVLSVLPESVILRPSIIFGPEDRFFNRFANMARFSPFLPAIGGG 190
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G +YELGGPD+ + M I +
Sbjct: 191 ETKLQPVYVGDVAEAVARAV--DGKLMPGGVYELGGPDVQPFKNWMKDMLGVIARKRLII 248
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ VA+ L + LP P L N D++ D +VS+ A+ T + +G
Sbjct: 249 SMPWWVAR--------LQASILGLLPNPMLTN-DQVTLLKFDNVVSEKAIKEGRTLEGMG 299
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 300 ITPEGVDAVLPSYLWRYRVAG 320
>gi|170576755|ref|XP_001893752.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, mitochondrial
precursor [Brugia malayi]
gi|158600051|gb|EDP37408.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, mitochondrial
precursor, putative [Brugia malayi]
Length = 427
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 144/248 (58%), Gaps = 19/248 (7%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMK 61
+SG + TVFG TG LGR ++ +LAK G Q+++P R DP R L++ G+LGQ++ +
Sbjct: 56 FSGNVVTVFGCTGLLGRLLINRLAKEGHQIILPSR---QDPYYTRQLRVHGELGQVLLLP 112
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
F +D+ +I+ + +NVV+NLIG YET+NYSFE+ + A RIA IAKE GI +FI
Sbjct: 113 FQLKDEESIRQAIRYSNVVVNLIGARYETKNYSFEETHVEGARRIARIAKEM-GIQKFIH 171
Query: 122 ISCLGASSSSPSRVFS-------TKAAAEEAVLRELPWATIMRPAAMIGTE-DRLLNKW- 172
+S + AS ++P +F+ TK EE V E P ATI+RP M G D +N +
Sbjct: 172 MSAMNASKNTPPTLFNKPSQFLRTKGLGEEVVREEFPNATIIRPGMMYGGNYDAFINYFL 231
Query: 173 -AQFVKKFNFFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVH 230
Q + + ++ G T P++V DV+ V + D ++GK YE GP + +
Sbjct: 232 AIQRIPHRSLIFVYRKGEHTYKMPIWVGDVSKGVERTIVDP-HAIGKTYEFVGPHCYKLS 290
Query: 231 ELAELMYD 238
EL + MYD
Sbjct: 291 ELIDYMYD 298
>gi|161621089|ref|YP_001594975.1| NADH-ubiquinone oxidoreductase [Brucella canis ATCC 23365]
gi|376277450|ref|YP_005153511.1| NADH-ubiquinone oxidoreductase [Brucella canis HSK A52141]
gi|161337900|gb|ABX64204.1| NADH-ubiquinone oxidoreductase [Brucella canis ATCC 23365]
gi|363405824|gb|AEW16118.1| NADH-ubiquinone oxidoreductase [Brucella canis HSK A52141]
Length = 328
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 162/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 14 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 72
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L A
Sbjct: 73 SVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEG--IRMTHLSSLAAD 130
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E AV LP ++RP+ + G EDR N++A F P+ G G
Sbjct: 131 VNSPSAYARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMACFSPFLPVIGGG 190
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G IYELGGPD+ + M I V
Sbjct: 191 ETKLQPVYVGDVAEAVARAV--DGKLMPGGIYELGGPDVQPFKAWMQNMLKVIGRKRMIV 248
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ A+ A +L +P P+ P D++ SD +VS+ A+ T Q +G
Sbjct: 249 SMPWWAARLQAS----ILNLLPNPMLTP-----DQVTLLKSDNVVSEQAIKEGRTLQGMG 299
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 300 ITPETVDAILPAYLWRYRVAG 320
>gi|260567715|ref|ZP_05838184.1| NADH-ubiquinone oxidoreductase [Brucella suis bv. 4 str. 40]
gi|260154380|gb|EEW89461.1| NADH-ubiquinone oxidoreductase [Brucella suis bv. 4 str. 40]
Length = 333
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 162/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 77
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L A
Sbjct: 78 SVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEG--IRMTHLSSLAAD 135
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E AV LP ++RP+ + G EDR N++A F P+ G G
Sbjct: 136 VNSPSAYARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMACFSPFLPVIGGG 195
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G IYELGGPD+ + M I V
Sbjct: 196 ETKLQPVYVGDVAEAVARAV--DGKLMPGGIYELGGPDVQPFKAWMQNMLKVIGRKRMIV 253
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ A+ A +L +P P+ P D++ SD +VS+ A+ T Q +G
Sbjct: 254 SMPWWAARLQAS----ILNLLPNPMLTP-----DQVTLLKSDNVVSEQAIKEGRTLQGMG 304
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 305 ITPETVDAILPAYLWRYRVAG 325
>gi|261217625|ref|ZP_05931906.1| NAD-dependent epimerase/dehydratase [Brucella ceti M13/05/1]
gi|261320502|ref|ZP_05959699.1| NAD-dependent epimerase/dehydratase [Brucella ceti M644/93/1]
gi|260922714|gb|EEX89282.1| NAD-dependent epimerase/dehydratase [Brucella ceti M13/05/1]
gi|261293192|gb|EEX96688.1| NAD-dependent epimerase/dehydratase [Brucella ceti M644/93/1]
Length = 333
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 162/321 (50%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV L K G +V V R E ++ +G++GQI ++ N R
Sbjct: 19 LVTVFGGSGFVGRAVVAALTKRGYRVRVAVRKPEI-AYYMAPLGNVGQIQMVQANVRHRG 77
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + ++ V+NL+G E+ F V A+ IA AK G +R +S L
Sbjct: 78 SVERVVKGSDHVVNLVGILAESGRQRFNAVQVLGAKHIAEAAKAEG--IRMTHLSSLATD 135
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E AV LP ++RP+ + G EDR N++A + F P+ G G
Sbjct: 136 VNSPSAYARTKAEGEIAVQSVLPDTVVLRPSIIFGHEDRFFNRFANMARFSPFLPVIGGG 195
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ DG M G IYELGGPD+ + M I V
Sbjct: 196 ETKLQPVYVGDVAEAVARAV--DGKLMPGGIYELGGPDVQPFKAWMQDMLKVIGRKRMIV 253
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ A+ A +L +P P+ P D++ SD +VS+ A+ T Q +G
Sbjct: 254 SMPWWAARLQAS----ILNLLPNPMLTP-----DQVTLLKSDNVVSEQAIKEGRTLQGMG 304
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL YR G
Sbjct: 305 ITPETVDAILPAYLWRYRVAG 325
>gi|418936324|ref|ZP_13490051.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. PDO1-076]
gi|375056965|gb|EHS53162.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. PDO1-076]
Length = 326
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 168/321 (52%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LA+ G ++ V R D L+ +G++GQI ++ N R
Sbjct: 9 LVTVFGGSGFVGRHVVRALARRGYRIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRG 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G +E SF+ V F A +A A+ R IS +GA
Sbjct: 68 SIDKAVQGADHVVNCVGILFENGRNSFDAVQEFGARAVAEAARAA--GARLTHISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S STK AE A+ +P ATI+RP+ + G ED NK+A + F PL G G
Sbjct: 126 AQSSSIYASTKGRAEAAIQSIIPDATILRPSIVFGPEDSFFNKFAAMARISPFLPLVGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDG-TSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T+ QPVYV DVA AV AL DG + GKIYELGG D+ T + + M + I V
Sbjct: 186 KTKFQPVYVEDVAEAV--ALSVDGKIASGKIYELGGRDVLTFKQCLQTMLEVIGRKRALV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +A + + PL P L + D++ D +VSD+A T + +G
Sbjct: 244 PMPFGIASMIGSIASAI------PLITPPLTS-DQVTLLKRDNVVSDSAKAEGRTLEGMG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P K+ YL+ +R G
Sbjct: 297 IQPVKVASILPTYLVHFRPHG 317
>gi|86747786|ref|YP_484282.1| dehydrogenase [Rhodopseudomonas palustris HaA2]
gi|86570814|gb|ABD05371.1| dehydrogenase [Rhodopseudomonas palustris HaA2]
Length = 321
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 171/321 (53%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV LA+ ++ V R E HL+ +G +GQI ++ N R
Sbjct: 8 LVTVFGGSGFIGRHVVSALARRDYRIRVAVRRPEL-AGHLQPLGRVGQIHAVQANLRYPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAE-RIAGIAKEHGGIMRFIQISCLGA 127
+I+A M A+V INL+G E F+ V AE + R + +S +GA
Sbjct: 67 SIEAAMRGAHVAINLVGILAEGGAQKFDAVQ---AEGAASIAKAAAAVGARMVHVSAIGA 123
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
++SP+R +KAA E+AVL +P ATI+RP+ + G ED+ N++A + PL G
Sbjct: 124 DAASPARYARSKAAGEQAVLAAVPTATILRPSVVFGPEDQFTNRFASLARMLPVVPLVG- 182
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA AV A+ D T G YELGGP+ T+ E+ E++ +TI +
Sbjct: 183 AETKLQPVYVGDVATAVAEAV-DGNTRPGATYELGGPEQLTMREIIEIILETIDRQRLLL 241
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +A AM LL+ P L D++ D IVS+ A LT Q LG
Sbjct: 242 PLPFGLASLQAM----LLQFAPGDLK----LTPDQVELLKVDNIVSEAAKSAGLTLQGLG 293
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P ++ YL +RK G
Sbjct: 294 ITPDSMQAIVPSYLWRFRKTG 314
>gi|337264839|ref|YP_004608894.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum
WSM2075]
gi|336025149|gb|AEH84800.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum
WSM2075]
Length = 325
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 160/322 (49%), Gaps = 21/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ VFG +GF+GR+VV+ LAK G ++ V R D HL+ +G++GQI P++ N R
Sbjct: 10 LVVVFGGSGFVGRHVVRALAKRGYRIRVACR-RPDLAGHLQPLGNVGQIQPVQANVRVRW 68
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VINL+ +E+ F V+ F A +A A+ G + IS LGA
Sbjct: 69 SVDRAVQGADHVINLVAVLHESGRQKFSAVHEFGARAVAEAARSVGAGL--THISALGAD 126
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TKA E+AVL + A I RP+ G ED N++A + PL G G
Sbjct: 127 LGSGSDYARTKALGEQAVLETIKDAVIFRPSINFGPEDSFFNRFANMARYSPVLPLIGGG 186
Query: 189 STRIQPVYVVDVAAAVTAAL--KDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
++QPVYV DVA AV ++ K DG G+IYELGGP + T E E + + I
Sbjct: 187 HNKLQPVYVGDVAEAVARSVEGKVDG---GQIYELGGPKVLTFRECMEELLEVIERKRLL 243
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDL 302
V VP+ VA A +L +P P L D++ IVSD A T L
Sbjct: 244 VPVPWWVANIQAS----ILGLLPNP-----LLTKDQVMQLREHNIVSDAATKANRTLTGL 294
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P + YL +R G
Sbjct: 295 GIQPQSIATVLPSYLWRFRAAG 316
>gi|241207267|ref|YP_002978363.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240861157|gb|ACS58824.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 326
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 162/321 (50%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G + V R D L+ +G++GQI ++ N R +
Sbjct: 9 LVTVFGGSGFVGRHVVRALAKRGYNIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRS 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ V+N +G +E +F+ V F +A A+ G + IS +GA
Sbjct: 68 SIDRAVDGASHVVNCVGILHEAGRNTFDAVQEFGGRAVAEAARGAGATL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S T+ AE A+L A I RP+ + G ED NK+A+ + PL G G
Sbjct: 126 AKSDSDYGRTQGRAETAILSVKTDAVIFRPSIVFGPEDSFFNKFAEMARMSPILPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYPHYV 247
T+ QPVYV D+A AV A+ D + GK+YELGGP++ + E E M T R+ P V
Sbjct: 186 KTKFQPVYVEDIAEAVARAV-DGKVAGGKVYELGGPEVLSFRECLETMLKVTCRKNP-LV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +A + + VPF P D++ D +VS A T + LG
Sbjct: 244 SLPFGIASMIGS----IASLVPFITPP---ITPDQVRMLKRDNVVSKEAEAEGRTLKGLG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL+ YR G
Sbjct: 297 IAPTMVASVLGSYLVHYRPHG 317
>gi|312113307|ref|YP_004010903.1| NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC
17100]
gi|311218436|gb|ADP69804.1| NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC
17100]
Length = 327
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 164/322 (50%), Gaps = 20/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGRYVVQ LAK G ++ V R E +L+ +G +GQI + N RD+
Sbjct: 10 VVTVFGGSGFLGRYVVQALAKAGFRIKVAVRRPELA-LYLQPLGSVGQIALVSANVRDEK 68
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ V+NL+G + F+ V+ E IA A+ G+ RF+ +S +GA
Sbjct: 69 SVAEAVRGADAVVNLVGILAPSGRQRFKAVHADAPELIAKAARA-AGVKRFVHVSAIGAD 127
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TK E L P I+RP+ + G ED+ N++A PL G G
Sbjct: 128 RLSHSAYARTKGEGEARALAAFPQTVILRPSLVFGPEDQFFNRFAGLAALSPVLPLIG-G 186
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPVYV DVA AVTAA++ T G +YELGGP ++T E+ + + + + +
Sbjct: 187 NTRFQPVYVGDVARAVTAAVEGRATE-GAVYELGGPSVYTFREILQKVCEWTQRPRVLLP 245
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDNAL----TFQDLG 303
VPF AK A + L PG LD++ +D IV A+ T + LG
Sbjct: 246 VPFWAAKIQAFFVQAL----------PGAPITLDQVRLLQNDNIVGAEAIRDQRTLEGLG 295
Query: 304 IV-PHKLKGYPTEYLIWYRKGG 324
+ P ++ YL YR G
Sbjct: 296 VTEPKSIEVIVPPYLQRYRPRG 317
>gi|426401983|ref|YP_007020955.1| short chain dehydrogenase family protein [Candidatus
Endolissoclinum patella L2]
gi|425858651|gb|AFX99687.1| short chain dehydrogenase family protein [Candidatus
Endolissoclinum patella L2]
Length = 314
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 159/318 (50%), Gaps = 12/318 (3%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G + TVFG +GF+GR VV +LAK G++V R E + LK MG +GQI +
Sbjct: 3 GKVVTVFGASGFIGRSVVYKLAKCGARVNSVCRNVEK-AKFLKTMGAVGQITLTSVDVTS 61
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
I + A++VINLIG E R +F V H A A + G+ + +S L
Sbjct: 62 VKAIAQAIKGASIVINLIGILNEHRRNNFNAV-HCAASGAIAKAAKLLGVKAMLHVSALC 120
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A S S +K A E+ V A I+RP+ + G +D NK+A + PL G
Sbjct: 121 ADEHSLSEYARSKFAGEKLVRTAFSEAIILRPSIVFGKDDSFFNKFAYMAQVLPILPLIG 180
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G+++ QPVYV+D+A A+ AAL + + G+ YE+GGP +++ EL E++
Sbjct: 181 GGTSKFQPVYVIDLAEAIIAAL-NTPAAYGQTYEVGGPSVYSFRELMEIILKETNRKVLL 239
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+++PF A A+ LL+ P P + D++ D IVS +A T DL I P
Sbjct: 240 IRIPFWFASLKAL----LLELTPNP-----ILTRDQVELLKMDNIVSHDAKTINDLFIKP 290
Query: 307 HKLKGYPTEYLIWYRKGG 324
++ YL YR GG
Sbjct: 291 TPIEIIIPTYLNKYRPGG 308
>gi|122170840|sp|Q0DWQ7.1|CCB12_ORYSJ RecName: Full=Cyclin-B1-2; AltName: Full=G2/mitotic-specific
cyclin-B1-2; Short=CycB1;2
Length = 391
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 107/153 (69%), Gaps = 18/153 (11%)
Query: 109 IAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRL 168
++KEHGG MRFIQ+SCLGAS+SS SR+ KAA EE+VL+E P P ++ +
Sbjct: 256 VSKEHGGFMRFIQVSCLGASASS-SRMLRAKAAGEESVLKEFP-----EPLRLL-----I 304
Query: 169 LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFT 228
++ + NF +RIQPVYVVDVAAA+ +LKDDGTSMGK Y LGGP+I+T
Sbjct: 305 SHRQSMGTCILNFH-------SRIQPVYVVDVAAAIVNSLKDDGTSMGKSYGLGGPEIYT 357
Query: 229 VHELAELMYDTIREYPHYVKVPFPVAKAVAMPR 261
VH+LAELMY+TI E+P Y+ VP P+A+A+A P
Sbjct: 358 VHDLAELMYETICEWPRYIDVPLPIARAIASPE 390
>gi|398355965|ref|YP_006401429.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii USDA 257]
gi|390131291|gb|AFL54672.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii USDA 257]
Length = 326
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 165/320 (51%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GR+VV+ LAK G ++ V R D HL+ +G +GQI ++ N R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGHLQPLGSMGQISFVQANLRYRK 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VIN +G +E+ +F+ V F A +A A+ G + IS +GA+
Sbjct: 68 SVDRAVEGADHVINCVGVLFESGRNTFDAVQDFGARAVAEAARAAGATL--THISAIGAN 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TK AE AVL +P A I+RP+ + G ED NK+A + PL G G
Sbjct: 126 TQSESSYARTKGRAEIAVLETVPEAVILRPSIIFGPEDDFFNKFASMARFAPALPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV A+ D + G IYELGG + + E E+ +TI +V
Sbjct: 186 RTKFQPVYVTDVAEAVARAV-DGKLTGGTIYELGGAQVLSFRECLEITLNTIDRKRSFVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + VPF P D++ SD +VS A T +GI
Sbjct: 245 IPFGIASLLGS----VASLVPFIAPP---ITADQVVLLKSDNVVSAAAEAEGRTLPGIGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P L+ YL+ +R G
Sbjct: 298 EPTLLESILPTYLVRFRPQG 317
>gi|294675722|ref|YP_003576337.1| NAD-dependent epimerase/dehydratase [Rhodobacter capsulatus SB
1003]
gi|294474542|gb|ADE83930.1| NAD-dependent epimerase/dehydratase family protein [Rhodobacter
capsulatus SB 1003]
Length = 325
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 164/318 (51%), Gaps = 11/318 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ +K G +GQ+ P N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEALFVKPYGAVGQVEPFFCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ M A+ V+N +G +F DV A RIA IA E G + + + IS +GA
Sbjct: 63 SVRTAMQGADAVVNCVGILVNEGRNTFMDVQADGAGRIARIAAELG-VSKLVHISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TK E AVL+ P A I+RP+ + GTED N++A K F P+
Sbjct: 122 NESDSAYSRTKGWGELAVLKSFPKAVILRPSVIFGTEDGFFNRFAAMAKFGPFLPITAP- 180
Query: 189 STRIQPVYVVDVAAAVTAAL--KDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
T+ QPVYV DVAAA + + +GT YELGGPD+ T ++ +LM I
Sbjct: 181 LTKFQPVYVDDVAAAAVQGILGEAEGT-----YELGGPDVETFEDIMKLMLKVIGRKNIV 235
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P VA+ A + ++ + L + D++ +V +A TF DLGI P
Sbjct: 236 IGLPQVVARTTAAIGDT-VQWLTGGLITNRILTTDQLKNLGRHNVVGKSAKTFADLGITP 294
Query: 307 HKLKGYPTEYLIWYRKGG 324
+ +YL +R G
Sbjct: 295 TPMAAVLPDYLWRFRPHG 312
>gi|427780593|gb|JAA55748.1| Putative nadh:ubiquinone oxidoreductase ndufa9/39kda subunit
[Rhipicephalus pulchellus]
Length = 393
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 147/253 (58%), Gaps = 11/253 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG++ TVFG +G LGR++V +L K+G+Q+++P R D + LKL GDLGQ++ FN
Sbjct: 47 FSGVVCTVFGASGCLGRFLVNKLGKIGTQLVLPARTNLYDMQRLKLCGDLGQVLFTPFNL 106
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D+ +I M +NVVINLIG++ ET N+ F +V+ AERIA IA+E G+ + I S
Sbjct: 107 KDELSIAKAMKYSNVVINLIGKDTETSNFPFNEVHVKGAERIARIARE-SGVQKLIHFSA 165
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK 177
L + + S+ F++K E+ V P A I RPA M D L+ + ++
Sbjct: 166 LNVTENPKPIIKFGGSKFFASKWLGEQMVKEAFPGAIIFRPADMYSHGDHFLSYYVSNLR 225
Query: 178 K-FNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
+ + P++ G I QPVY +VA V A+ ++G + G+IY+ GP + + EL +
Sbjct: 226 RNLTYVPVWNKGKGIIKQPVYTGNVAEGVVNAIFEEG-NQGEIYQAVGPRRYELGELIDY 284
Query: 236 MYDTIREYPHYVK 248
M+ +R Y++
Sbjct: 285 MFRVMRREVGYIR 297
>gi|421851938|ref|ZP_16284630.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479957|dbj|GAB29833.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 317
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 160/316 (50%), Gaps = 15/316 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
IATV G GF+GRYVVQ LA+ G +V V R + R L+ +G +GQI P + DD
Sbjct: 6 IATVLGGGGFVGRYVVQNLARAGYEVRVASRRPDLTAR-LRALGRVGQIAPFYASVLDDA 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+VVINL+ + + + VN A R+A IA E + F+Q+S LGAS
Sbjct: 65 SIACAVQGADVVINLVAVLTSVKQQTLQAVNVEGAGRVARIAAE-ANVPVFVQMSALGAS 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ S ++AA E+ V + P A I+RP+ + G ED N +A + P++
Sbjct: 124 ETALSEYGKSRAAGEKIVRQYRPDAVIIRPSVIFGPEDHFFNMFAGLARYLPCLPVY-SA 182
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
R+QPVYV DVA A+ + + GK + LGGP T+ ++A + + +
Sbjct: 183 HARLQPVYVGDVAQAIFMVAQSSAFA-GKEFLLGGPQEMTMLDIARFVLRVTQRHKPVFI 241
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLF-NLDEINAYTSDTIVSDNALTFQDLGIVPH 307
VP VAK AM E L PG F D++ SD +V F+ LGIVP
Sbjct: 242 VPSVVAKLQAMILERL----------PGHFLTQDQLRMLASDNVVPTGRSGFEALGIVPQ 291
Query: 308 KLKGYPTEYLIWYRKG 323
++ YL +R G
Sbjct: 292 SVEAIVPSYLARFRSG 307
>gi|433771701|ref|YP_007302168.1| putative nucleoside-diphosphate sugar epimerase [Mesorhizobium
australicum WSM2073]
gi|433663716|gb|AGB42792.1| putative nucleoside-diphosphate sugar epimerase [Mesorhizobium
australicum WSM2073]
Length = 325
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 159/320 (49%), Gaps = 17/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ VFG +GF+GR+VV+ LAK G ++ V R D HL+ +G++GQI P++ N R
Sbjct: 10 LVVVFGGSGFVGRHVVRALAKRGYRIRVACR-RPDLAGHLQPLGNVGQIQPVQANVRVRW 68
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ V+NL+ +E+ F V+ F A IA A+ G + IS LGA
Sbjct: 69 SVDRAVQGADHVVNLVAILHESGRQKFSAVHEFGARAIAEAARSVGAGL--THISALGAD 126
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TKA E+AVL + A I+RP+ G ED N++A + PL G G
Sbjct: 127 PDSESDYARTKALGEKAVLETIADAVILRPSINFGPEDSFFNRFANMARYSPVLPLIGGG 186
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV ++ D G++YELGGP++ T E + + I V
Sbjct: 187 QTKFQPVYVGDVAEAVARSV-DGKIDGGQVYELGGPNVLTFKECMQELLTVIERKRLLVP 245
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLGI 304
VP+ +A A +L +P P L D++ +VSD A T LGI
Sbjct: 246 VPWWMANIQAS----ILGLLPNP-----LLTKDQVMQLREHNVVSDEAAKANRTLAGLGI 296
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + YL +R G
Sbjct: 297 QPQSIATILPSYLWRFRAAG 316
>gi|254420040|ref|ZP_05033764.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Brevundimonas
sp. BAL3]
gi|196186217|gb|EDX81193.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Brevundimonas
sp. BAL3]
Length = 325
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 166/323 (51%), Gaps = 20/323 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFR----GCEDDPRHLKLMGDLGQIVPMKFNP 64
+ T+FG +GF+G V+ LA+ G ++ V R E P +GD GQI M+ +
Sbjct: 8 VVTLFGGSGFIGSQAVRALARRGWRIRVAVRNPVLAIEVQP-----LGDPGQIQFMRCDV 62
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+ + A + ++ V+NL+G ++ H A R A + G+ R +QIS
Sbjct: 63 TNAEDVAAAVRGSHAVVNLVGVLHDGGGKRGFKSAHVEAARNIAQASKAAGVERVVQISA 122
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GA ++S S TK AE + P A I+RP+ + G D LN++A PL
Sbjct: 123 IGADANSRSAYARTKGEAENEIRAVYPDAVILRPSLVFGASDSFLNRFAAMATMAPALPL 182
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY-DTIREY 243
G G T+ QPVYV DVA AV A+ G + G+ +ELGGPD+F+ E+ EL+ +T R
Sbjct: 183 IGGGKTQFQPVYVGDVAEAVARAVIR-GDAAGRTFELGGPDVFSFREVLELVCRETGRNR 241
Query: 244 PHYVKVPFPVAKAV-AMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
P + +PFPVA+ + ++ + + L + PL R D++ SD IVS +A DL
Sbjct: 242 P-LLPIPFPVARLMGSVFQTVALLGLTPPLTR------DQVVMLQSDNIVSPDAAGLTDL 294
Query: 303 GIV-PHKLKGYPTEYLIWYRKGG 324
G+V P + YL YR GG
Sbjct: 295 GMVHPTSMGSIAPSYLWRYRDGG 317
>gi|319780071|ref|YP_004139547.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165959|gb|ADV09497.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 325
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 157/320 (49%), Gaps = 17/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ VFG +GF+GR+VV+ LAK G ++ V R D HL+ +G++GQI P++ N R
Sbjct: 10 LVVVFGGSGFVGRHVVRALAKRGYRIRVACR-RPDLAGHLQPLGNVGQIQPVQANVRVRW 68
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ V+NL+ +E+ F V+ F A +A A+ G + IS LGA
Sbjct: 69 SVDRAVQGADHVVNLVAILHESGRQKFSAVHEFGARAVAEAARSVGAGL--THISALGAD 126
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TKA E+AVL + A I RP+ G ED N++A + PL G G
Sbjct: 127 LDSESDYARTKALGEKAVLETIKDAVIFRPSINFGPEDGFFNRFANMARYSPVLPLIGGG 186
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV ++ D G+IYELGGP + T + E + D I V
Sbjct: 187 QTKFQPVYVGDVAEAVARSV-DGKVDGGQIYELGGPKVLTFKQCMEELLDVIERKRLLVP 245
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
VP+ VA A +L +P P L D++ IVSD A T LGI
Sbjct: 246 VPWWVANIQAS----ILGLLPNP-----LLTKDQVMQLREHNIVSDAANQTNRTLAGLGI 296
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
+ YL YR G
Sbjct: 297 QSQSIATILPSYLWRYRAAG 316
>gi|162147897|ref|YP_001602358.1| NAD-dependent epimerase/dehydratase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542514|ref|YP_002274743.1| NADH dehydrogenase (ubiquinone) [Gluconacetobacter diazotrophicus
PAl 5]
gi|161786474|emb|CAP56056.1| putative NAD-dependent epimerase/dehydratase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530191|gb|ACI50128.1| NADH dehydrogenase (ubiquinone) [Gluconacetobacter diazotrophicus
PAl 5]
Length = 307
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 169/313 (53%), Gaps = 13/313 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+A V G +GFLGRYVV++LA+ G V V R + L GD+GQIVP+ + D++
Sbjct: 6 VAAVIGGSGFLGRYVVRRLAEDGYVVRVAARRADLAAALRPL-GDVGQIVPLGASILDED 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A VV+NL+G E +F+ V+ A R+A +A G+ R + +S +GAS
Sbjct: 65 SLVPVVESAQVVVNLVGILAERGRATFQAVHVDGAARVARLAAS-AGVGRLLHVSAIGAS 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S +KAA EEAVLR +P ATI+RP+ + G EDR N +A + P++G
Sbjct: 124 PDSRSAYGRSKAAGEEAVLRNMPEATIVRPSILFGPEDRFTNLFAALARYSPVMPVYG-A 182
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TRIQPVY DVA + L +G S G+IYE GGP I+T+ + + T+ +
Sbjct: 183 ATRIQPVYAADVAEGIRRILAGEGHS-GEIYEFGGPAIWTMEGVMRWIVATLGRS----R 237
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+ FP+ A+A + + L+ +P + D++ + D + S+ + LGI
Sbjct: 238 LIFPMPGALAWWQAMWLEHLPGR-----MLTRDQLTMLSVDNVASEGTPGLRLLGIDAVP 292
Query: 309 LKGYPTEYLIWYR 321
++ YL Y+
Sbjct: 293 MEMIAPSYLSRYK 305
>gi|77163645|ref|YP_342170.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
gi|254435912|ref|ZP_05049419.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Nitrosococcus
oceani AFC27]
gi|76881959|gb|ABA56640.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
gi|207089023|gb|EDZ66295.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Nitrosococcus
oceani AFC27]
Length = 308
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 153/300 (51%), Gaps = 16/300 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
TVFG TGFLGR +V +L + G +V + R PR L G GQI + + RD++++
Sbjct: 13 TVFGGTGFLGRAIVHRLVESGMRVRIVAR----HPRAPNLAGARGQIALQRADVRDEDSV 68
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ A V+N +G E +F ++ AER+A A E GI R I IS +G +
Sbjct: 69 AEALKGATGVVNAVGLYVEQGQATFRAIHEEGAERVARRAGE-AGIRRLIHISGIGVDPA 127
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S S+ +A E+ V P ATI+RP+ M G D LN + V + PLFG GST
Sbjct: 128 SASKYARARAYGEQRVREIFPNATILRPSVMFGPNDAFLNSL-KTVTRLPVVPLFGQGST 186
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
R+QPVYV DVA AV L+ S GK +ELGG + ++ E + + + VP
Sbjct: 187 RLQPVYVEDVARAVLQVLEMPEAS-GKTFELGGARAYRYRDIIEQVLTHLSRRRLLLPVP 245
Query: 251 FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLK 310
F V + LL ++ LP L LD++ +D + + A TF DLGI P L+
Sbjct: 246 FVVWR--------LLARIASLLPNAPL-TLDQVILMETDNVANAKASTFNDLGIEPCSLE 296
>gi|409400000|ref|ZP_11250190.1| NADH dehydrogenase (ubiquinone) [Acidocella sp. MX-AZ02]
gi|409130929|gb|EKN00661.1| NADH dehydrogenase (ubiquinone) [Acidocella sp. MX-AZ02]
Length = 312
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 160/318 (50%), Gaps = 19/318 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
IATVFG +GFLGR++VQ+LA+ G +V R E + LK MGD+GQ+VP+ D+
Sbjct: 7 IATVFGASGFLGRHIVQRLAEAGYRVRAAVRDVEG-AKFLKPMGDVGQVVPLYAPVSDEA 65
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ A +VINL G E+R F + A R+A +A G R + +S +GA+
Sbjct: 66 ACMRAIEGAQIVINLAGILAESRTGDFGRTHAQGAGRVARLAYAAGA--RLVHVSAIGAN 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+S S +K E+AV P A I+RP+ + G +D N++A+ P+ G
Sbjct: 124 PASASSYARSKGEGEQAVRAAHPRAAILRPSIVFGPQDEFFNRFAKMAVVSPILPVV-YG 182
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPV+V DVA A AL + G+I+ELGGP+ + L M D I
Sbjct: 183 ETKFQPVFVGDVADAAMLALYPQ--AEGQIFELGGPEQKSFRALMRQMLDIIDRDCWIWD 240
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P +A+ +A LP GL D+I SD +V+ AL F+ LGI P +
Sbjct: 241 MPVGLARLIA------------SLPMAGLTG-DQIILLASDNVVAPGALGFETLGIAPKR 287
Query: 309 LKGYPTEYLIWYRKGGPK 326
L YL YR G +
Sbjct: 288 LDLILPGYLQRYRATGRR 305
>gi|227824169|ref|YP_002828142.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii NGR234]
gi|227343171|gb|ACP27389.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii NGR234]
Length = 326
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 165/320 (51%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GR+VV+ LAK G ++ V R D HL+ +G +GQI ++ N R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGHLQPLGTMGQISFVQANLRYRK 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VIN +G +E+ +F+ V F A +A A+ G + IS +GA+
Sbjct: 68 SVDRAVEGADHVINCVGVLFESGRNTFDAVQDFGARAVAEAARAAGATL--THISAIGAN 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S+ TK AE A+L +P A I+RP+ + G ED NK+A + PL G G
Sbjct: 126 TNSESQYARTKGRAEIAILETVPEAIILRPSIIFGPEDDFFNKFASMARFAPALPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV A+ D G IYELGG + + E E+ +TI +V
Sbjct: 186 QTKFQPVYVTDVAEAVARAV-DGKLKGGTIYELGGAQVLSFRECLEITLNTIDRKRSFVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + VPF P D++ SD +VS A T +GI
Sbjct: 245 IPFGIASLLGS----VASLVPFIAPP---ITADQVVLLKSDNVVSAAAEAEGRTLAGIGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P L YL+ +R G
Sbjct: 298 EPTLLDSILPTYLVRFRPQG 317
>gi|84686090|ref|ZP_01013986.1| NADH-ubiquinone oxidoreductase [Maritimibacter alkaliphilus
HTCC2654]
gi|84666183|gb|EAQ12657.1| NADH-ubiquinone oxidoreductase [Rhodobacterales bacterium HTCC2654]
Length = 322
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 163/318 (51%), Gaps = 15/318 (4%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
T++G +GF GRY+ +++AK G +V V R ++ +K G +GQ+ P+ N RDDN++
Sbjct: 2 TIYGGSGFAGRYIARRMAKAGWRVRVAVR-RPNEAIFVKPYGTVGQVAPILCNIRDDNSV 60
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
M A+ V+N +G + +F V A RIA +A E G I + +S +GA +
Sbjct: 61 AEAMTGADAVVNCVGTFDKGGKNNFGAVQDEGATRIARLAAEKG-IGTLVHLSAIGADTE 119
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S +K E +L P A I+RP+ M G ED N++A + P+ G G T
Sbjct: 120 GDSLYAQSKGRGEAGILEHFPNAVILRPSVMFGPEDNFFNRFAGMTRMGPVLPIVG-GQT 178
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
R QPV+V DVAAA A+K G + IYELGGPD+ T EL + M I+ V +P
Sbjct: 179 RFQPVFVDDVAAAAEKAVK--GEAAPGIYELGGPDVQTFRELMQDMLTVIQRRRMIVNIP 236
Query: 251 FPVAKAVAM----PREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
F +A + + V PL R D++ + SD V++ TF DLGI P
Sbjct: 237 FWIAGVMGTVFDAGSAMTGGLVSAPLTR------DQVTSLRSDNAVAEGGKTFADLGITP 290
Query: 307 HKLKGYPTEYLIWYRKGG 324
++ +YL +R+ G
Sbjct: 291 TAMEVVLPQYLWRFRQTG 308
>gi|398830861|ref|ZP_10589042.1| putative nucleoside-diphosphate sugar epimerase [Phyllobacterium
sp. YR531]
gi|398213441|gb|EJN00035.1| putative nucleoside-diphosphate sugar epimerase [Phyllobacterium
sp. YR531]
Length = 322
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 17/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LAK G +V V R D HL+ +G +GQI ++ N R
Sbjct: 8 LVTVFGGSGFVGRHVVRALAKRGYRVKVAVR-RPDLAFHLQPLGGVGQIQAVQANLRYRW 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ +A ++ VINL+G YE + F V+ F A +A A+ + +S LGA
Sbjct: 67 SVDRAVAGSDHVINLVGILYEGGSQRFNTVHDFGARAVAEAARAA--GVPLTHMSALGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S S+K AEEAVL+ LP A I+RP+ + G ED NK+A + F PL G G
Sbjct: 125 PQSQSLSASSKGRAEEAVLKILPEAYIIRPSVIFGPEDGFFNKFAAMARISPFLPLIGGG 184
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA A+ ++ D G YELGG ++ T H+ + M I ++
Sbjct: 185 HTKFQPVYVGDVAEAIARSV-DGALQPGATYELGGGEVLTFHQCMDEMLKVIGRKRLFLP 243
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF VA + + LP+P + D++ +D IVS+ A T + LGI
Sbjct: 244 IPFWVAS--------IQGSILGLLPKP-MITSDQVIQLRNDNIVSEAAKADGRTLEGLGI 294
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P ++ YL +R G
Sbjct: 295 RPQTIETILPSYLWRFRVQG 314
>gi|91974655|ref|YP_567314.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodopseudomonas
palustris BisB5]
gi|91681111|gb|ABE37413.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodopseudomonas
palustris BisB5]
Length = 321
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 171/320 (53%), Gaps = 17/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV LA+ ++ V R E HL+ +G +GQI ++ N R
Sbjct: 8 LVTVFGGSGFIGRHVVSALARRDYRIRVAVRRPEL-AGHLQPLGRVGQIHAVQANLRHPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M A+V INL+G E F+ V A IA A R + +S +GA
Sbjct: 67 SVAAAMRGAHVAINLVGILAEGGAQKFDAVQAEGAAAIAKAAAAV--GARMVHVSAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++SP+ +KAA E+AVL +P ATI+RP+ + G ED+ N++A + PL G
Sbjct: 125 ANSPAGYARSKAAGEQAVLSAVPQATILRPSVVFGPEDQFTNRFAALARISPVVPLVG-A 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T++QPVYV DVA AV A+ D T G YELGGP+ T+ E+ E++ +TI +
Sbjct: 184 DTKLQPVYVGDVATAVAEAV-DGNTRPGATYELGGPEQLTMREIIEIILETIDRKRMLLP 242
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A+ AM LL+ P L D++ D +VSD A LT Q LG+
Sbjct: 243 LPFGLARMQAM----LLQFAPGDLK----LTPDQVELLKVDNVVSDAAKSAGLTLQGLGV 294
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P ++ YL +RK G
Sbjct: 295 TPDSMQAIVPSYLWRFRKTG 314
>gi|421848910|ref|ZP_16281896.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus NBRC 101655]
gi|371460430|dbj|GAB27099.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus NBRC 101655]
Length = 317
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 160/316 (50%), Gaps = 15/316 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
IATV G GF+GRYVVQ LA+ G +V V R + R L+ +G +GQI P + DD
Sbjct: 6 IATVLGGGGFVGRYVVQNLARAGYEVRVASRRPDLTAR-LRALGRVGQIAPFYASVLDDA 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+VVINL+ + + + VN A R+A IA E + F+Q+S LGAS
Sbjct: 65 SVACAVQGADVVINLVAVLTSVKQQTLQAVNVEGAGRVARIAAE-ANVPVFVQMSALGAS 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ S ++AA E+ V + P A I+RP+ + G ED N +A + P++
Sbjct: 124 ETALSEYGKSRAAGEKIVRQYRPDAVIIRPSVIFGPEDHFFNMFAGLARYLPCLPVY-SA 182
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
R+QPVYV DVA A+ + + GK + LGGP T+ ++A + + +
Sbjct: 183 HARLQPVYVGDVAQAIFMVAQSSAFA-GKEFLLGGPQEMTMLDIARFVLRVTQRHKPVFI 241
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLF-NLDEINAYTSDTIVSDNALTFQDLGIVPH 307
VP VAK AM E L PG F D++ SD +V F+ LGIVP
Sbjct: 242 VPSVVAKLQAMILERL----------PGHFLTQDQLRMLASDNVVPTGRSGFEALGIVPQ 291
Query: 308 KLKGYPTEYLIWYRKG 323
++ YL +R G
Sbjct: 292 SVEAIVPSYLARFRGG 307
>gi|414169266|ref|ZP_11425103.1| hypothetical protein HMPREF9696_02958 [Afipia clevelandensis ATCC
49720]
gi|410886025|gb|EKS33838.1| hypothetical protein HMPREF9696_02958 [Afipia clevelandensis ATCC
49720]
Length = 322
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 173/322 (53%), Gaps = 20/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+V+++LA+ ++ V R E HL+ +G +GQI ++ N R
Sbjct: 8 LVTVFGGSGFLGRHVIRELARRDYRIRVGVRRPEL-AGHLQPLGRVGQIHAVQANVRYPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A A+VV+NL+G + +F+ V AE +A A R + +S +GA
Sbjct: 67 SVQAAAQGASVVVNLVGILAQGGAQTFDAVQDKGAEAVARAAAAI--GARMVHVSAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S + +KAA E AV LP ATIMRP+ + G ED+ N++A + PL G G
Sbjct: 125 ANSASAYYRSKAAGEAAVAAALPSATIMRPSIVFGPEDQFTNRFAGLARLSPMLPLIGGG 184
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T++QPVY DVA A+ A+ D T G YELGGP++ T+ ++ E + + V
Sbjct: 185 LTKLQPVYAGDVATAIADAV-DGKTKAGATYELGGPEVMTMRQIIEDILKITQRDRMLVP 243
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDL 302
+PF +A+ LK F PG F L D++ +D +VSD A LT + L
Sbjct: 244 LPFALAR---------LKSF-FLQFAPGDFKLTPDQVEMLRADNVVSDAAKAAGLTLEGL 293
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P L+ YL YRK G
Sbjct: 294 GITPDSLEAVTPSYLWRYRKTG 315
>gi|323137966|ref|ZP_08073040.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242]
gi|322396685|gb|EFX99212.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242]
Length = 335
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/325 (35%), Positives = 160/325 (49%), Gaps = 8/325 (2%)
Query: 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
V +G I TVFG +GF+GR+VV+ LA+ G +V + R D HL+ +G +GQ++ ++ N
Sbjct: 6 VGAGRIVTVFGGSGFVGRHVVRALARDGWRVRIACR-RPDLAFHLQPLGRVGQVMAVQAN 64
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
R ++ A + A V+NL+G ET F DV A +A AK G I + IS
Sbjct: 65 VRKPESVAAALRGAEAVVNLVGILAETGAQKFSDVQAAGARAVAEAAKAAG-IDNVVHIS 123
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
+GA S S +KA E A+ +P A I+RP+ + G ED N++A + F P
Sbjct: 124 AIGADPKSASAYGRSKAEGEAAMHAAVPTAVILRPSIIFGPEDDFFNRFATMARFFPVIP 183
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
+ G TR QPVYV DVA AV AL + G IYELGGP+I T EL + +
Sbjct: 184 IVG-AETRFQPVYVGDVAEAVATALAGRAKA-GAIYELGGPEIKTFAELIDYVLKVTERE 241
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TF 299
K+ F K VA + K P D++ D +VSD A+ T
Sbjct: 242 RGVAKLSFSTGKLVAGVTQTCTKLSLGLFPTLLRMTGDQVELLRHDNVVSDAAIREGRTL 301
Query: 300 QDLGIVPHKLKGYPTEYLIWYRKGG 324
L I P ++ YL YRK G
Sbjct: 302 AGLNIEPQSIEAIVPSYLYRYRKTG 326
>gi|378828485|ref|YP_005191217.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii HH103]
gi|365181537|emb|CCE98392.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii HH103]
Length = 326
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 162/320 (50%), Gaps = 15/320 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GR+VV+ LAK G ++ V R D HL+ +G +GQI ++ N R
Sbjct: 9 LVTIFGGSGFVGRHVVRALAKRGYRIRVAVR-RPDLAGHLQPLGTMGQISFVQANLRYRK 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VIN +G +E+ +F+ V F A +A A+ G + IS +GA+
Sbjct: 68 SVDRAVEGADHVINCVGVLFESGRNTFDAVQDFGARAVAEAARAAGATL--THISAIGAN 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S TK AE A+L +P A I+RP+ + G ED NK+A + PL G G
Sbjct: 126 TQSASSYARTKGRAEIAILETVPEAVILRPSIIFGPEDDFFNKFASMARFAPALPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV A+ D G IYELGG I + E E+ TI +V
Sbjct: 186 QTKFQPVYVTDVAEAVARAV-DGKLKGGTIYELGGAQILSFRECLEITLKTIDRKRSFVS 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+PF +A + + VPF P D++ SD +VS A T +GI
Sbjct: 245 IPFGIASLLGSVASL----VPFIAPP---ITADQVVLLKSDNVVSAAAEAEGRTLAGIGI 297
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P L YL+ +R G
Sbjct: 298 EPTLLDSILPTYLVRFRPQG 317
>gi|357386452|ref|YP_004901176.1| NAD-dependent epimerase/dehydratase [Pelagibacterium halotolerans
B2]
gi|351595089|gb|AEQ53426.1| NAD-dependent epimerase/dehydratase [Pelagibacterium halotolerans
B2]
Length = 326
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 162/320 (50%), Gaps = 17/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
IAT+FG +GF+G + Q LA+ G V V R D H+++ G GQI P++ N R
Sbjct: 8 IATIFGGSGFIGTQLTQDLARRGYSVRVAVR-RPDLAGHVRMFGFPGQIQPIQANLRYPE 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A + ++VVINL+G +E F V A+ +A A+ + G+ I +S +GA
Sbjct: 67 SVAAAVRGSDVVINLVGILFEKGKQRFRAVQTQGAKAVAEAAR-NAGVPTLIHMSAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SPS KA E+ V + P A ++RP+ + G+ED N + + PL G
Sbjct: 126 PQSPSAYQRAKALGEDEVFKAFPKAVVIRPSLVFGSEDGFFNLFGFVARMSPIMPLIGR- 184
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+T+ QPVYV DVA A+ A + GK+YELGGP+I T+ ++ E + + R +
Sbjct: 185 NTKFQPVYVADVAQAIALA-AEGAVKTGKVYELGGPEIVTMEQVIERVLEQTRRKRLVLP 243
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLGI 304
+P V K VA I LP+P L D++ D IVS A+ TF+ GI
Sbjct: 244 LPEFVVKPVASVLSI--------LPKP-LLTPDQVVQLGIDNIVSPEAIKQKRTFEAFGI 294
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + Y+ +RK G
Sbjct: 295 APTTIDAILPTYMWRFRKHG 314
>gi|350411637|ref|XP_003489411.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Bombus impatiens]
Length = 402
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 175/318 (55%), Gaps = 17/318 (5%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMK 61
++GI+ T+FG GF+G + +L K+G+Q+++P R C DP H LK+ GDLGQ+
Sbjct: 57 FNGIVCTIFGCGGFVGNSLSIRLGKIGTQLILPHR-C--DPYHVKELKVGGDLGQVYYHP 113
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
F+ RD+ +I T+ +NVVINLIG+ YET N+SF+DV+ A +A +AK+ + RFI
Sbjct: 114 FDLRDEESIIRTIKYSNVVINLIGQTYETSNFSFDDVHVEGARTLARLAKK-CNVERFIH 172
Query: 122 ISCLGASSS-SP------SRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
+SC+ A +P S++ +K E AV E P ATI+RP+ + G D ++ +
Sbjct: 173 MSCINAEEKPTPMMIQGGSKMLKSKWKGEIAVREEFPEATIVRPSVIYGPMDTFVSHYMS 232
Query: 175 FVK-KFNFFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHEL 232
++ F + PL+ G +T QPVY+ DV + + A +++ T+ GK Y+ G + ++ L
Sbjct: 233 PIRTTFEYIPLWRKGENTEKQPVYIHDVISGLVAIIRNPDTA-GKTYQFIGSQRYKLNNL 291
Query: 233 AELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIV 292
+M+D +Y V + ++ ++ P+ R + + + + + +
Sbjct: 292 INMMFDIKMKYVGNYMVIGNIKINPYFWMKVTFAELIAPIHRTIDLSWEILEFHHATDKI 351
Query: 293 SDNALTFQDLGIVPHKLK 310
N T +DLGI+P K
Sbjct: 352 DPNLPTLEDLGIMPTDFK 369
>gi|316931441|ref|YP_004106423.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
DX-1]
gi|315599155|gb|ADU41690.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
DX-1]
Length = 321
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 169/323 (52%), Gaps = 23/323 (7%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR++V LA+ ++ V R E HL+ +G +GQI ++ N R
Sbjct: 8 LVTVFGGSGFLGRHIVSALARRDYRIRVAVRRPEL-AGHLQPLGRVGQIHAVQANLRYPE 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M A+V INL+G E F+ V A +A A G R + +S +GA
Sbjct: 67 SVAAAMRGAHVAINLVGILAEGGAQKFDAVQGNGAASVAQAAASVGA--RMVHVSAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SP+R +KAA E AV +P ATI RP+ + G ED+ N++A + PL G
Sbjct: 125 PDSPARYARSKAAGERAVHEAVPQATIFRPSVVFGPEDQFTNRFAALARMSPVLPLVG-A 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T++QPVYV DVA A+ A+ DG + G +YELGGP++ T+ E+ ++ P +
Sbjct: 184 DTKLQPVYVGDVATAIADAV--DGLARPGAVYELGGPEVLTMREIMRIILQITDRKPLLL 241
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQD 301
+PF +A AM LL+ PG F L D++ D +VS+ A LT Q
Sbjct: 242 PLPFGLASLQAM----LLQFA------PGAFKLTPDQVRMLEVDNVVSEAATKAGLTLQG 291
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
LGI P ++ YL +RK G
Sbjct: 292 LGIQPDSMQAVVPSYLWRFRKTG 314
>gi|86136837|ref|ZP_01055415.1| NADH ubiquinone oxidoreductase, putative [Roseobacter sp. MED193]
gi|85826161|gb|EAQ46358.1| NADH ubiquinone oxidoreductase, putative [Roseobacter sp. MED193]
Length = 329
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 162/321 (50%), Gaps = 16/321 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V + R ++ H+K G GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRIAVR-RPNEAMHVKPYGVPGQVEPVLCNIRDDV 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A M A+ V+N +G +F+ V A R+A +A++ I + + IS LGA
Sbjct: 63 SVAAAMQGADAVVNCVGVLNAHGKNTFDAVQAEGAARVARLAQQQD-IGQLVHISALGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S TKA EEAV A I+RP+ + GTED N++A P+ G
Sbjct: 122 AEGESEYARTKAQGEEAVRSNFANAVILRPSIIFGTEDEFFNRFAGMASLSPLLPI-AKG 180
Query: 189 STRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T QPVYV DVA AAV L G + IYELGGP++ + L M D I +
Sbjct: 181 KTLFQPVYVDDVARAAVQGVL---GRAEPGIYELGGPEVKSFAALMRQMCDVIMRRRIVL 237
Query: 248 KVP----FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
+P +P+A M L+ V L + D++ + +D +VS+ A F DLG
Sbjct: 238 SLPGFAVWPLAFGFDM-----LQAVSLQLIENKVLTRDQLKSLGTDNVVSEGAKGFADLG 292
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P ++ YL +R G
Sbjct: 293 ITPERMGPILPSYLWKFRPAG 313
>gi|258543053|ref|YP_003188486.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-01]
gi|384042975|ref|YP_005481719.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-12]
gi|384051492|ref|YP_005478555.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-03]
gi|384054599|ref|YP_005487693.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-07]
gi|384057834|ref|YP_005490501.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-22]
gi|384060475|ref|YP_005499603.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-26]
gi|384063767|ref|YP_005484409.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-32]
gi|384119776|ref|YP_005502400.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256634131|dbj|BAI00107.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-01]
gi|256637191|dbj|BAI03160.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-03]
gi|256640243|dbj|BAI06205.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-07]
gi|256643300|dbj|BAI09255.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-22]
gi|256646355|dbj|BAI12303.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-26]
gi|256649408|dbj|BAI15349.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-32]
gi|256652394|dbj|BAI18328.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256655452|dbj|BAI21379.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter
pasteurianus IFO 3283-12]
Length = 317
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 159/316 (50%), Gaps = 15/316 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
IATV G GF+GRYVVQ LA+ G +V V R + R L+ +G +GQI P + DD
Sbjct: 6 IATVLGGGGFVGRYVVQNLARAGYEVRVASRRPDLTAR-LRALGRVGQIAPFYASVLDDA 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+VVINL+ + + + VN A R+A IA E + F+Q+S LGAS
Sbjct: 65 SIACAVQGADVVINLVAVLTSVKQQTLQAVNVEGAGRVARIAAE-ANVPVFVQMSALGAS 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ S ++AA E+ V + P A I+RP+ + G ED N +A + P++
Sbjct: 124 ETALSEYGKSRAAGEKIVRQYRPDAVIIRPSVIFGPEDHFFNMFAGLARYLPCLPVY-SA 182
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
R+QPVYV DVA A+ + + GK + LGGP T+ ++A + + +
Sbjct: 183 HARLQPVYVGDVAQAIFMVAQSSAFA-GKEFLLGGPQEMTMLDIARFVLRVTQRHKPVFI 241
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLF-NLDEINAYTSDTIVSDNALTFQDLGIVPH 307
VP VAK AM E L PG F D++ SD +V F LGIVP
Sbjct: 242 VPSVVAKLQAMILEWL----------PGHFLTQDQLRMLASDNVVPTGRSGFDALGIVPQ 291
Query: 308 KLKGYPTEYLIWYRKG 323
++ YL +R G
Sbjct: 292 SVEAIVPSYLARFRGG 307
>gi|328704640|ref|XP_001948072.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Acyrthosiphon pisum]
Length = 411
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 144/251 (57%), Gaps = 11/251 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++G++ATVFG TG LG ++ +L K+G+Q+++P+RG R LKL GDLGQ++ ++
Sbjct: 56 FNGVVATVFGATGLLGGNLINKLGKIGTQLIIPYRGDAYFIRELKLAGDLGQVLFQPYHL 115
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D+ +I+ + +NVVINL+GR++ET+N+ F DV+ A RIA I++E G+ R I +S
Sbjct: 116 QDEESIRKAVKYSNVVINLVGRDWETKNFKFNDVHVEGARRIARISREM-GVERLIHVSA 174
Query: 125 LGASS-------SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FV 176
L S ++K E+AV E P ATI RP+ + G DR L ++ +
Sbjct: 175 LNVDPLPAPIYLKKGSGFLASKKVGEQAVCDEFPDATIFRPSDIYGQGDRFLLMYSHAWR 234
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
+ L+ G + QPV V DVA + A+ D T GKIY+ GP + + +L +
Sbjct: 235 RSHQQVVLWKKGEQTVKQPVAVSDVAYGIVNAMLDRSTK-GKIYQAVGPTPYMLSDLIDW 293
Query: 236 MYDTIREYPHY 246
M+ +R +
Sbjct: 294 MFAVLRRNNQF 304
>gi|346468967|gb|AEO34328.1| hypothetical protein [Amblyomma maculatum]
Length = 404
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 144/246 (58%), Gaps = 11/246 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++G++ TVFG +G LGR++V +L K+G+Q+++P R + LKL GDLGQ++ + F
Sbjct: 60 FNGVVCTVFGASGCLGRFLVNKLGKIGTQLILPSRTNFYYMQRLKLCGDLGQVLLVPFEL 119
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D+ +I M +NVVINLIG++ ET NY F +V+ AERIA IA+E G+ + I S
Sbjct: 120 KDELSIAKAMKYSNVVINLIGKDTETSNYPFSEVHVKGAERIARIARE-SGVQKLIHFSA 178
Query: 125 LGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKW-AQFV 176
L A+ + S+ +++K E+ V P A I RPA M ED L + +
Sbjct: 179 LNATENPKPIIKFGGSKFYASKWLGEQVVRDAFPGAIIFRPADMYSHEDHFLRYYVTKLR 238
Query: 177 KKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
+ + F P++ G+ + QPVY DVA V A+ ++G G+IY+ GP + + EL +
Sbjct: 239 RNWLFMPVWKRGNGIVKQPVYTADVAEGVVNAIFEEGNE-GEIYQAVGPRRYELGELIDY 297
Query: 236 MYDTIR 241
M+ +R
Sbjct: 298 MFRVMR 303
>gi|292490281|ref|YP_003525720.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4]
gi|291578876|gb|ADE13333.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4]
Length = 302
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 155/307 (50%), Gaps = 16/307 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
TVFG TGFLGR +V+ + G V + R P + G QI + RD+N++
Sbjct: 7 TVFGGTGFLGRAIVRHFVESGVAVRIAAR----HPSAPEFAGASNQIELQSADVRDENSV 62
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ A V+N +G E +F+ ++ AERIA A+E I + + IS +GA
Sbjct: 63 AEAVNGATGVVNAVGLYVEKGKATFDAIHVEGAERIARRARE-ANIRKLVHISGIGADPG 121
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S S+ +A E+ V P A I+RP+ + G D L + V + PLFG G+T
Sbjct: 122 SASKYVRARAHGEQRVQSAFPEAVILRPSVLFGPNDAFLGAL-KTVTRLPVVPLFGKGTT 180
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
R+QPVYV DVA AV AL+ G + G+I+ELGG I++ ++ E + + VP
Sbjct: 181 RLQPVYVEDVARAVLQALETPGVA-GRIFELGGAQIYSYRDILERVLAHFSRRRLLLPVP 239
Query: 251 FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLK 310
FP+ + LL ++ LP P L D++ +D +V A TF DLGI P+ L+
Sbjct: 240 FPIWR--------LLARISSLLPNPPL-TRDQVILMETDNVVGTGAGTFGDLGIEPYSLE 290
Query: 311 GYPTEYL 317
T L
Sbjct: 291 QMLTHCL 297
>gi|372278075|ref|ZP_09514111.1| NADH dehydrogenase [Oceanicola sp. S124]
Length = 329
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 169/316 (53%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GRY+ +++A+ G +V V R D+ ++ G +GQ+ P+ N RDD+
Sbjct: 6 LVTIFGGSGFVGRYIARRMAQQGWRVRVAVR-RPDEAGFVRTYGVVGQVEPVFCNIRDDS 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A A+VV+N +G +F V A RIA IA E G + + +S +GA
Sbjct: 65 SVRAVTHGADVVVNCVGTFAAKGKNNFTAVQAEGAGRIARIAAEEG-VSGLVHLSAIGAD 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S +KAA EEAVL +P A I+RP+ + GTED+ N++A K PL G G
Sbjct: 124 AESDSLYAQSKAAGEEAVLAAMPGAVILRPSVIFGTEDKFFNRFANMAKMTPVLPLVGAG 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPV+V DVAAA A+ G + IYELGGP++ + + M ++ +
Sbjct: 184 -TRFQPVWVDDVAAAAEVAVL--GRAPAGIYELGGPEVDSFSGWMKTMLKVVQRRRGVIG 240
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P + + + LL+ + L + D++ +D +VS+ A F +LGI P
Sbjct: 241 LPVFAGQLMGWSFD-LLQTLSLGLFTNSVLTRDQVRQLGADNVVSEGAKGFAELGIEPSA 299
Query: 309 LKGYPTEYLIWYRKGG 324
+ +YL +R G
Sbjct: 300 PEAVMPDYLWPHRPSG 315
>gi|338972420|ref|ZP_08627795.1| NAD-dependent epimerase/dehydratase [Bradyrhizobiaceae bacterium
SG-6C]
gi|338234584|gb|EGP09699.1| NAD-dependent epimerase/dehydratase [Bradyrhizobiaceae bacterium
SG-6C]
Length = 351
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 172/322 (53%), Gaps = 20/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+V+++LA+ ++ V R E HL+ +G +GQI ++ N R
Sbjct: 37 LVTVFGGSGFLGRHVIRELARRDYRIRVGVRRPEL-AGHLQPLGRVGQIHAVQANVRYPA 95
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A A+VV+NL+G + +F+ V AE +A A R + +S +GA
Sbjct: 96 SVQAAAQGASVVVNLVGILAQGGAQTFDAVQDKGAEAVARAAAAI--GARMVHVSAIGAD 153
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S + +KAA E AV LP ATIMRP+ + G ED+ N++A + PL G G
Sbjct: 154 ANSASSYYRSKAAGEAAVAAALPSATIMRPSIVFGPEDQFTNRFAGLARLSPILPLIGGG 213
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T++QPVY DVA A+ A+ D G YELGGP++ T+ ++ E + + V
Sbjct: 214 LTKLQPVYAGDVATAIADAV-DGKAKAGATYELGGPEVMTMRQIIEDILKITQRDRMLVP 272
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDL 302
+PF +A+ LK F PG F L D++ +D +VSD A LT + L
Sbjct: 273 LPFALAR---------LKSF-FLQFAPGDFKLTPDQVEMLRADNVVSDAAKAAGLTLEGL 322
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P L+ YL YRK G
Sbjct: 323 GITPDSLEAVTPSYLWRYRKTG 344
>gi|254559973|ref|YP_003067068.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Methylobacterium extorquens DM4]
gi|254267251|emb|CAX23083.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Methylobacterium extorquens DM4]
Length = 389
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 160/320 (50%), Gaps = 9/320 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LAK G ++ V R D L+ +G +GQIV ++ N R +
Sbjct: 18 LVTVFGGSGFLGRHVVRALAKRGYRIRVAVR-RPDLALFLQPLGKVGQIVGVQANLRYPD 76
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I+ + +++VINL+G E+ + F + A IA A G R + +S LGA
Sbjct: 77 SIRRAVEHSDIVINLVGILQESGSQRFSKLQTEGAGEIARAATAVGA--RLVHVSALGAD 134
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SPS +KA E VLR P A I RP+ + G D N++A PL G
Sbjct: 135 PDSPSLYARSKALGEAEVLRASPDAVIFRPSLVFGPGDGFFNRFASLATFLPALPLAG-A 193
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPV+V DVA A+ A+ D G++YELGGP++ T+ M + +
Sbjct: 194 QTRFQPVFVGDVAEAIARAV-DGLAPGGRVYELGGPEVNTLEYFVRYMLEVTMRRRAVLD 252
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+P PVA+ A EI LP D++ D +VSD A T + LGI
Sbjct: 253 LPEPVARLQARVIEIADTLTLGLLPANLKLTRDQVALLQVDNVVSDAAKAEGRTIEALGI 312
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
VP ++ YL +RK G
Sbjct: 313 VPTAVEAVVPGYLWRFRKAG 332
>gi|58584495|ref|YP_198068.1| nucleoside-diphosphate-sugar epimerase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58418811|gb|AAW70826.1| Nucleoside-diphosphate-sugar epimerase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 316
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 12/318 (3%)
Query: 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
+FG TGF+G+++V++LA G + V R ++ LKL G+LGQI K + D+
Sbjct: 5 VVIFGGTGFIGKHIVRRLATAGYLIRVFVRN-QEKAACLKLCGNLGQISIFKGDFFDEKL 63
Query: 70 IKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
I ++ + NVVINL+G YE + +SF V+ +AE+IA AK M I S +G +
Sbjct: 64 ILESVEECNVVINLVGILYEVKEHSFYAVHVGIAEKIARAAKIKNVSM-MIHFSAMGIEN 122
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
S S +K E+AV P A I++P+ + G ED K+A+ F PL G G+
Sbjct: 123 SKLSEYAQSKLKGEKAVTAAFPEAIIIKPSLVFGKEDNFFTKFARLATILPFLPLIGSGT 182
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
T+ QP+ V D+A V + + KIY +GGP I++ L + + + V V
Sbjct: 183 TKFQPICVTDLAEMVYRIINLNKQD-KKIYNIGGPKIYSFKSLLKFILNVTNRKCLLVNV 241
Query: 250 PFPVAKAVAMPRE-----ILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
FP+AK +A E ILLK P + D++ S +I + + F+ + I
Sbjct: 242 SFPMAKLIAFFLESRIISILLK--PITGDISPMLTRDQVRVMMSSSI--EKSTDFEAIKI 297
Query: 305 VPHKLKGYPTEYLIWYRK 322
P ++ EYL Y+K
Sbjct: 298 RPLSIENVVPEYLKVYKK 315
>gi|357025698|ref|ZP_09087815.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [Mesorhizobium
amorphae CCNWGS0123]
gi|355542403|gb|EHH11562.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [Mesorhizobium
amorphae CCNWGS0123]
Length = 324
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 160/317 (50%), Gaps = 11/317 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ VFG +GF+GR+VV+ LAK G ++ VP R D HL+ +G++GQI P++ N R
Sbjct: 10 LVVVFGGSGFVGRHVVRALAKRGYRIRVPVR-RPDLAGHLQPLGNVGQIQPVQANVRVRW 68
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VINL+ +E+ F V+ F + IA A+ G + IS LGA
Sbjct: 69 SVDRAVQGADHVINLVAILHESGRQKFSAVHEFGSRAIAEAARSVGAGL--THISALGAD 126
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ S TKA E+AVL + A I RP+ G ED N++A + PL G G
Sbjct: 127 LNAQSDYARTKALGEKAVLETIADAVIFRPSINFGPEDAFFNRFAGMARYSPVLPLLGGG 186
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV +++ G+IYELGGP + T E E + I +
Sbjct: 187 LTKFQPVYVGDVAEAVARSVEGK-VEGGRIYELGGPQVLTFKECMEELLTVIERKRILIP 245
Query: 249 VPFPVAKAVAMPREILLKKVPFP-LPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
VP+ +A A +L +P P L + + L E N SD +N T LGI P
Sbjct: 246 VPWWMANMQAS----ILGLLPNPMLTKDQVLQLREHNV-VSDAAARENR-TLAGLGIQPQ 299
Query: 308 KLKGYPTEYLIWYRKGG 324
+ YL +R G
Sbjct: 300 SIGTILPSYLWRFRAAG 316
>gi|163757551|ref|ZP_02164640.1| putative oxidoreductase protein [Hoeflea phototrophica DFL-43]
gi|162285053|gb|EDQ35335.1| putative oxidoreductase protein [Hoeflea phototrophica DFL-43]
Length = 326
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 164/321 (51%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ LA+ G + V R D HL+ +G +GQIV ++ N R+ +
Sbjct: 9 LVTVFGGSGFVGRHVVRALARRGYSIRVAVR-RPDLAGHLQPLGGVGQIVAVQANLRNRD 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ VIN +G +E+ F+ V F A +A A+ G + IS +GA
Sbjct: 68 SVDRAVRGADHVINCVGILFESGRNKFDSVQAFGARAVAEAARAQGAGL--THISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TK AE AV +P A IMRP+ + G ED NK+A + PL G G
Sbjct: 126 PDSDSDYARTKGYAELAVAEVMPDARIMRPSIIFGPEDGFFNKFAGMARLAPALPLVGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T+ QPVYV DVA AV ++ DGT + G IYELGGP + T + E M +TI V
Sbjct: 186 ETKFQPVYVGDVAEAVARSV--DGTLVPGAIYELGGPRVMTFRQCLEEMLETIHRKRPLV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P+ VA + + +PF P D++ SD +VSD A T +G
Sbjct: 244 TLPWGVASLMGK----ITSLIPFIDPP---LTADQVKLLKSDNVVSDEAARENRTLAGIG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I ++ YL +R G
Sbjct: 297 IRQTTVEAILPTYLGRFRPHG 317
>gi|302654125|ref|XP_003018874.1| hypothetical protein TRV_07100 [Trichophyton verrucosum HKI 0517]
gi|291182556|gb|EFE38229.1| hypothetical protein TRV_07100 [Trichophyton verrucosum HKI 0517]
Length = 474
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 159/296 (53%), Gaps = 15/296 (5%)
Query: 28 AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87
A+ G V+VP+R E RHLK+ GDLG++V M+++ R+ +I+ ++ +++V NLIGR
Sbjct: 168 ARQGCTVIVPYRE-EMTKRHLKVTGDLGRVVFMEYDLRNTQSIEESVRHSDIVYNLIGRN 226
Query: 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVL 147
Y T+N+S+ED++ ERI ++ + R++ +S AS SPS F TKA E
Sbjct: 227 YPTKNFSYEDIHVEGTERIVESVAKY-DVDRYVHVSSYNASLDSPSEFFRTKAQGENVAR 285
Query: 148 RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207
P TI+RPA M G EDRLL++ A+ F + R PV+ +DV A+
Sbjct: 286 SIFPETTIVRPAPMFGFEDRLLHRLARVTNIFTSNHM----QERYWPVHAIDVGRALEIM 341
Query: 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKK 267
L ++ T+ + +EL GP ++ E++EL+ I + ++ VP KA+ P L +
Sbjct: 342 LMEEWTT-AQTFELYGPKNYSTKEISELVDREIIKKRRHINVP----KAIMKPAAYWLNR 396
Query: 268 VPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKG 323
+ + P + + DE+ D + A TF+DLGI P L YL+ YR
Sbjct: 397 LLW-WP---ITSADEVEREFIDQQIDPTAKTFKDLGIEPTDLNTLTFHYLLGYRSS 448
>gi|391345481|ref|XP_003747014.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Metaseiulus occidentalis]
Length = 389
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 166/312 (53%), Gaps = 26/312 (8%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMK 61
++GIIAT+FG+ GFL RYV+ L + G+ +++P R C DP LK+ GDLGQI
Sbjct: 52 FNGIIATIFGSNGFLARYVINALGQTGAMMVLPHR-C--DPYLMMRLKVAGDLGQIQFHF 108
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
F+ RD+ +I A M +NVVINLIG++ + N+S +DV+ A IA +A+E G+ + I
Sbjct: 109 FDLRDEKSIAAAMQYSNVVINLIGKDQASGNFSLDDVHVKGARSIARLARE-SGVEKLIH 167
Query: 122 ISCLGASSS------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWA-Q 174
S L A+ +PS+ FSTK E+ V E P A + RP+ M G EDR + ++ Q
Sbjct: 168 FSALNAAEKPEKLMFAPSKFFSTKWEGEQVVREEFPDAIVFRPSDMYGHEDRFVRYYSGQ 227
Query: 175 FVKKFNFFPLFGDGSTRIQ-PVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELA 233
+ ++ PL+ G + PV+V DVA AV A+ G G+ Y+ GP ++ + L
Sbjct: 228 WRCNYSVMPLWKGGRKIYKAPVFVGDVARAVVEAINQKGNE-GETYQAVGPKLYELRSLM 286
Query: 234 ELMYDTIREYPHYVKVPF-PVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIV 292
+ + H + F P+ A E+ F P+ L +TSDTI
Sbjct: 287 RYISQLLEREMHLYDLRFDPLFMAKISYAEL------FKNPKMSWERLR--REHTSDTIY 338
Query: 293 SDNALTFQDLGI 304
+ T +DLG+
Sbjct: 339 GE-IKTIEDLGV 349
>gi|225683993|gb|EEH22277.1| 40 kD subunit of NADH dehydrogenase [Paracoccidioides brasiliensis
Pb03]
Length = 362
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 158/298 (53%), Gaps = 15/298 (5%)
Query: 26 QLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85
+A+ G V+VP+R E RHLK+ GDLG++V M+++ R+ +I+ ++ ++VV NL+G
Sbjct: 54 HIARQGCTVVVPYRE-EMAKRHLKVTGDLGRVVFMEYDLRNTQSIEESVRHSDVVYNLVG 112
Query: 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEA 145
R+Y T+N+S+EDV+ ERIA ++ + RFI +S A +SPS F TKA E+
Sbjct: 113 RKYPTKNFSYEDVHIDGLERIAEATAKY-DVDRFIHVSSYNADPNSPSEFFRTKARGEQL 171
Query: 146 VLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205
P TI+RPA M G ED LL+K A F + R PV+V+DV A+
Sbjct: 172 ARSIFPETTIVRPAPMFGFEDNLLHKLASITNLFTSNHM----RERYWPVHVIDVGHALE 227
Query: 206 AALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILL 265
+ D S+ + YEL GP ++ E+AEL+ I + ++ VP + K A LL
Sbjct: 228 KMMFTDA-SVAQTYELYGPKNYSTAEIAELVDREIIKKRRHINVPKRIMKPAAYWANRLL 286
Query: 266 KKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKG 323
+P + DE+ D + +A TF+DL I P ++ YL YR
Sbjct: 287 W---WP-----AISADEVEMEFLDQQIDPSAKTFKDLDIEPAEISNLTFHYLQGYRSS 336
>gi|441618386|ref|XP_004088509.1| PREDICTED: LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1
alpha subcomplex subunit 9, mitochondrial-like [Nomascus
leucogenys]
Length = 393
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 139/233 (59%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+AT FG TGFLG+ VV L +GSQV++P+R D HL MGDLG ++ ++++ R
Sbjct: 68 SGIVATGFGATGFLGQCVVNHLGYVGSQVIIPYRCDTCDIMHLCPMGDLGXLLFLEWDVR 127
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINL+G ++ET+++ FEDV + + IA ++KE + +F+ ++ L
Sbjct: 128 DKDSIRRVVEHSNVVINLVGXDWETKSFDFEDVFVKIPQAIAQVSKE-AEVGKFVHVAHL 186
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
+ S SR KA E+AV P A I++ + G EDR LN +A F P
Sbjct: 187 NVNIKSSSRYLRNKAVGEKAVRDAFPEAIIVKLLDIFGREDRFLNYFANMC-WFGAIPHV 245
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVYVVDV+ + A+KD + GK + GP+ + + +L + ++
Sbjct: 246 SLGWKAVKQPVYVVDVSKGIVNAVKDPDAN-GKTFAFVGPNRYLLFDLVKYIF 297
>gi|254504132|ref|ZP_05116283.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Labrenzia
alexandrii DFL-11]
gi|222440203|gb|EEE46882.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Labrenzia
alexandrii DFL-11]
Length = 326
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 163/329 (49%), Gaps = 18/329 (5%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
M+ +G + TVFG +GFLGR++VQ L+K G +V R D HL+ +G GQI+ +
Sbjct: 1 MSTPLNGKLVTVFGGSGFLGRHIVQALSKRGYRVRAAVR-RPDLANHLQPLGAPGQIMAV 59
Query: 61 KFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+ N R ++ + A+ V+N +G T SF+ V F R A G+
Sbjct: 60 QANLRHRWSVDRAVQGADAVVNAVGILAPTGKQSFDAVQAF-GPRAIAEAARAAGLNGIT 118
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
IS +GA S S +KA E VL LP + I+RP+ + G ED N++A +
Sbjct: 119 HISAIGADPESASAYARSKAVGETGVLETLPDSIILRPSIVFGPEDNFFNQFAGMARISP 178
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDT 239
PL G G T+ QPVYV D+A AV A+ DGT G +YELGGP+I + + E M +
Sbjct: 179 VLPLVGGGETKFQPVYVCDIAEAVARAV--DGTLQPGSVYELGGPEIKSFRDCLEDMLEV 236
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL-- 297
+ + +PFPV+ E++ K + + P D++ D +VS+ A+
Sbjct: 237 TQRSRVLLPIPFPVS-------EVMGKVMQYMPGSP--LTADQVELLKKDNVVSEAAISE 287
Query: 298 --TFQDLGIVPHKLKGYPTEYLIWYRKGG 324
T +GI P L YL +R+ G
Sbjct: 288 GRTLSGIGIEPTTLAAILPSYLDRFREHG 316
>gi|324506569|gb|ADY42802.1| NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9 [Ascaris
suum]
Length = 446
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 166/320 (51%), Gaps = 29/320 (9%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMK 61
+SG + TVFG TGFLG VV +LAK GSQ+++P+R DP R K++G++GQI+
Sbjct: 72 FSGNVVTVFGATGFLGLSVVNRLAKQGSQLIIPYR---QDPYWVREHKVVGEVGQILFFP 128
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
F +D+ +I+ + +NVV+N+IG ++ T+ YSF + + A RIA IAKE G+ RFI
Sbjct: 129 FELKDEQSIRRVVKYSNVVVNMIGTKHATKKYSFAETHVNGARRIARIAKEM-GVERFIH 187
Query: 122 ISCLGASS-------SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
IS L A++ + S TKA EEAV E ATI+RPA M G D + +
Sbjct: 188 ISALNATTHPTPVLLKNGSEFLRTKAYGEEAVRDEFREATIIRPALMFGENDAFIQYYVS 247
Query: 175 FVKK--FNFFPLFGDGSTRIQ-PVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+K + L+ G + P++ DVA V + D T+ GK YE GP + + E
Sbjct: 248 RWRKTPLDHVWLYKAGEKTFKMPIWGGDVAMGVEKVVLDP-TTAGKTYEFVGPHCYQLSE 306
Query: 232 LAELMYDTIREYP----HYVKVPF---PVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN 284
L + MY P HY + P +A+ E+ K F P ++ E+
Sbjct: 307 LMDFMYRKAHCLPQFGFHYKRHGSRFNPYFRALVNSCELYGK--IFKCNTPLMWEWIEVV 364
Query: 285 AYTSDTIVSDNALTFQDLGI 304
T+D + A T DLG+
Sbjct: 365 ECTNDVLT--GAPTLADLGV 382
>gi|294010230|ref|YP_003543690.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
japonicum UT26S]
gi|292673560|dbj|BAI95078.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
japonicum UT26S]
Length = 312
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 159/324 (49%), Gaps = 20/324 (6%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
M V + TVFG GFLGR+V Q L G++V V R R +K +G LGQ +
Sbjct: 1 MGRVMKDSLVTVFGGGGFLGRHVAQALMARGARVRVAQRDLATALR-VKPLGALGQTQFV 59
Query: 61 KFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+ R ++ +A +++VINL+G + F+ +H A G+ +
Sbjct: 60 AADIRKPESVARAVAGSDIVINLVG----VLSSDFQG-SHHDGAANVAKAAAEAGVGALV 114
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
IS +GA + SPS +KAA EEAV P ATI+RP+ + G ED+ LN++A+ ++
Sbjct: 115 HISAIGADAQSPSAYGRSKAAGEEAVKAAFPSATIIRPSIVFGPEDQFLNRFAEIIRFTP 174
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
P+ G +TR QPVYV DVA A+ A ++ G GK YELGGP +++ EL + I
Sbjct: 175 VVPVIG-ANTRFQPVYVADVAQAIANAAENPGLHGGKTYELGGPQTYSMLELNAWIAKAI 233
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
VP +A +A+ LP G D++ D + + A
Sbjct: 234 GRERSLCPVPASIASLIAL------------LPG-GPITRDQLAMLGRDNVAAPGAKGLA 280
Query: 301 DLGIVPHKLKGYPTEYLIWYRKGG 324
DLG+ P + ++L+ YR+ G
Sbjct: 281 DLGVAPTPMPAVAEKWLVRYRRHG 304
>gi|219111161|ref|XP_002177332.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411867|gb|EEC51795.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 397
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 158/342 (46%), Gaps = 28/342 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G+ +FG +GFLG YV +L G + RG + + RHLK+ DLG+ ++PR
Sbjct: 52 AGVKVALFGASGFLGNYVCGELGANGFMAYLANRGDDMEMRHLKIPFDLGRTRFQFYSPR 111
Query: 66 DDNTIKATMAKANVVINLIGREYET---------------RNYSFEDVNHFMAERIAGIA 110
D ++IK + A+VV+N+IG+ YE+ NYSF D N + +A I
Sbjct: 112 DRDSIKEVIQDADVVVNMIGKYYESGQPIQTAKFPYVGYRTNYSFADANVEIPRTLAEIC 171
Query: 111 KEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLN 170
E + F+ +S AS + S TK A E+A+ PWATI+RP G +DR L+
Sbjct: 172 LEMQ-VDHFVHVSSASASPDARSEWSRTKYAGEQAIKEVYPWATIIRPTQFFGKQDRFLH 230
Query: 171 KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVH 230
+A+ K + PL G T QPV+ DVA + + G+ + GP F+
Sbjct: 231 WFARMAKWYRIVPLVDGGKTLTQPVWAGDVAKTILKVCDNPSIFEGRQIDCFGPAEFSYS 290
Query: 231 ELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN------ 284
ELA+ + D +P+ A+A +L+ PL P L + +
Sbjct: 291 ELADFVNDITERNRPVFNLPYDYYAAIAK----VLQYQRDPLITPDLVEIWSEDFLPSMP 346
Query: 285 --AYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
Y LT QDLGI P ++ E++ YR GG
Sbjct: 347 PEEYKLQKYEQTKILTMQDLGIEPTPIEKIAFEFMQIYRAGG 388
>gi|218528786|ref|YP_002419602.1| NADH dehydrogenase (ubiquinone) [Methylobacterium extorquens CM4]
gi|218521089|gb|ACK81674.1| NADH dehydrogenase (ubiquinone) [Methylobacterium extorquens CM4]
Length = 389
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 160/320 (50%), Gaps = 9/320 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LAK G ++ V R D L+ +G +GQIV ++ N R +
Sbjct: 18 LVTVFGGSGFLGRHVVRALAKRGYRIRVAVR-RPDLALFLQPLGKVGQIVGVQANLRYPD 76
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I+ + +++VINL+G E+ + F + A IA A G + + +S LGA
Sbjct: 77 SIRRAVEHSDIVINLVGILQESGSQRFSKLQTEGAGEIARAATAVGA--KLVHVSALGAD 134
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SPS +KA E VLR P A I RP+ + G D N++A PL G
Sbjct: 135 PDSPSLYARSKALGEAEVLRASPDAVIFRPSLVFGPGDGFFNRFASLATFLPALPLAG-A 193
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPV+V DVA A+ A+ D G++YELGGP++ T+ M + +
Sbjct: 194 QTRFQPVFVGDVAEAIARAV-DGLAPGGRVYELGGPEVNTLEYFVRYMLEVTMRRRAVLD 252
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+P PVA+ A EI LP D++ D +VSD A T + LGI
Sbjct: 253 LPEPVARLQARVIEIADTLTLGLLPANLKLTRDQVALLQVDNVVSDAAKAEGRTIEALGI 312
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
VP ++ YL +RK G
Sbjct: 313 VPTAVEAVVPGYLWRFRKAG 332
>gi|341890335|gb|EGT46270.1| hypothetical protein CAEBREN_21857 [Caenorhabditis brenneri]
Length = 429
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 164/321 (51%), Gaps = 32/321 (9%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMK 61
+SG + TVFG +GFLG VV + AK GSQ+++P+R DP R K++G+LGQ++
Sbjct: 58 FSGNVVTVFGASGFLGLPVVNKFAKNGSQIIIPYR---QDPYYMREHKVLGELGQVLYFP 114
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
F +D+ +I+ + +NVV+NLIG T NY ++DVN+ A R+A I KE G+ +F+
Sbjct: 115 FELKDEESIRKVVKYSNVVVNLIGTRVPTGNYGYDDVNNVGARRLAKICKEM-GVEKFVH 173
Query: 122 ISCLGASSSSP-------SRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
+S LGA+ P S TK E AV E P ATI+RP+ + G D + +
Sbjct: 174 LSALGATPDPPKGHFVAKSEFLRTKGLGEIAVREEFPEATIIRPSVIYGELDGFIQYYVS 233
Query: 175 FVKK--FNFFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+K + L+ G T P++V DVA + + +D T+ G YE GP + + E
Sbjct: 234 RWRKTPLDHVYLYKKGEQTYKMPIWVGDVALGIDRVV-NDPTAKGHTYEFVGPHCYQLSE 292
Query: 232 LAELMYDTIREYPHY------VKVPFPVAKAVAMPREILLK--KVPFPLPRPGLFNLDEI 283
L + MY P + +P P A+ + E+ K K PL R + ++
Sbjct: 293 LIDFMYKKAHCLPDFGFRYKRHGLPDPYFMALTLATELYGKVFKCKVPLNREWMEYIEVQ 352
Query: 284 NAYTSDTIVSDNALTFQDLGI 304
N D + + L DLG+
Sbjct: 353 N----DVLTGERTLA--DLGV 367
>gi|340729515|ref|XP_003403046.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Bombus terrestris]
Length = 402
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 147/248 (59%), Gaps = 11/248 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++GI+ T+FG +GF+G + +L K G+Q+++P R R LK+ GDLGQ+ F+
Sbjct: 57 FNGIVCTIFGCSGFIGNSLSIRLGKTGTQLILPHRCDPYHIRELKVGGDLGQVYYHPFDL 116
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D+ +I ++ +NVVINLIG+ YET N+SF+DV+ A +A +AK+ + RFI +SC
Sbjct: 117 KDEESIIRSIKYSNVVINLIGQTYETSNFSFDDVHVEGARTLARLAKK-CNVERFIHMSC 175
Query: 125 LGASSS-SP------SRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK 177
L A +P S++ +K E AV E P ATI+RP+ + G D+ ++ + +
Sbjct: 176 LNAEEKPTPMIIQDGSKMLKSKWRGEVAVREEFPEATIVRPSVIYGRMDKFVSHYMSADR 235
Query: 178 -KFNFFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
F + PL+ G T QPVY+ DV + + A +++ T+ GK Y+ G + F ++ L +
Sbjct: 236 TTFEYIPLWHKGEKTEKQPVYIHDVISGLVAIIRNPDTA-GKTYQFVGSERFKLNNLVNM 294
Query: 236 MYDTIREY 243
M++ +Y
Sbjct: 295 MFEIKMKY 302
>gi|339319747|ref|YP_004679442.1| NADH dehydrogenase subunit I [Candidatus Midichloria mitochondrii
IricVA]
gi|338225872|gb|AEI88756.1| NADH dehydrogenase subunit I [Candidatus Midichloria mitochondrii
IricVA]
Length = 305
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 168/309 (54%), Gaps = 16/309 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+FG +GF+GRYV+++LAK ++++V R + L LM +GQ+ K P
Sbjct: 10 VIFGGSGFVGRYVIRRLAKTNAKIIVVGRSASFR-QDLSLMCSVGQVSFQKV-PNLKMEW 67
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ +A + VINLIG ++T+ +F+ V+ +AE+IA A+ + + R + IS L +S
Sbjct: 68 QELLAGSTHVINLIGILFQTKKETFQSVHIELAEKIAHFARLNN-VSRLVHISALTCKTS 126
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S K + E AVL E P A I+RP+ + G+EDR LN +A+ ++ F P+ G T
Sbjct: 127 KSDYSMS-KISGESAVLNEFPEAVILRPSVIFGSEDRFLNLFARIIRYSFFVPMVVLGKT 185
Query: 191 RIQPVYVVDVAAAVTAALK-DDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
+ QP+YV DVAA++ D GKI+E+GG +++ +L +L+ I + ++ +
Sbjct: 186 KFQPIYVDDVAASIEKCCNLPDSQVAGKIFEIGGKKQYSLKQLFKLIASLINKRRIFIPL 245
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIV-SDNALTFQDLGIVPHK 308
PF ++ VA + + LP P + D++ ++V S+NAL ++LGI P
Sbjct: 246 PFSLSLLVAYVLQTI-------LPTP-ILTADQVKFLKKSSVVTSENAL--EELGIKPQS 295
Query: 309 LKGYPTEYL 317
L Y+
Sbjct: 296 LNFILARYI 304
>gi|239787682|emb|CAX84190.1| NADH-ubiquinone oxidoreductase [uncultured bacterium]
Length = 335
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 39/339 (11%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMKFNPR 65
+ TVFG +GF+GR VVQ+LA+ G V R DP LK MG++GQI+P+K N +
Sbjct: 4 VVTVFGASGFIGRQVVQRLARAGHVV----RAAVRDPIGAAFLKPMGEVGQIIPIKANLQ 59
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D +++ A+ VINL+G +E FE ++ A+R+A A+ GG + +S L
Sbjct: 60 DKASVQRACQGADAVINLVGILFERGASKFEAIHVEGAKRVAEAARA-GGAKSLVHVSAL 118
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK-------- 177
GA ++SPS +KA E AV P A I+RP+ + G +D N++A +
Sbjct: 119 GADANSPSAYARSKAKGEAAVQAAFPEAAIIRPSVVFGPDDDFFNRFAGLARLTGLLPVF 178
Query: 178 -------KFNF------FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP 224
KF+ F LFG G QPVYV D+A A+ AAL D ++ G+I+E+ GP
Sbjct: 179 VTDGFKPKFSLKDLEFDFDLFGSGGAAFQPVYVGDLADAILAAL-DRPSARGRIFEIVGP 237
Query: 225 DIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN 284
+ E+ E++ I+ P + +P V K A + LP+P L D++
Sbjct: 238 RPMHLKEVMEMVSSAIKRCPLILPLPPFVGKIQAFFLQF--------LPKPPL-TPDQMK 288
Query: 285 AYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKG 323
D + S DL I P + YL ++ G
Sbjct: 289 LLGKDNLPSGKHPGLADLDIKPTAPEVIVPSYLSRHQPG 327
>gi|17556106|ref|NP_497675.1| Protein Y53G8AL.2 [Caenorhabditis elegans]
gi|373220127|emb|CCD72292.1| Protein Y53G8AL.2 [Caenorhabditis elegans]
Length = 431
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 168/321 (52%), Gaps = 32/321 (9%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMK 61
+SG + TVFG +GFLG VV + AK GSQ+++P+R DP R K++G+LGQ++
Sbjct: 57 FSGNVVTVFGASGFLGLPVVNKFAKNGSQIIIPYR---QDPYYMREHKVLGELGQVLYFP 113
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
F D+ +I+ + +NVVINLIG T Y++ DVN A R+A I KE G+ +F+
Sbjct: 114 FELMDEESIRKAVKYSNVVINLIGTRVPTGKYNYYDVNDTGARRLARICKEM-GVEKFVH 172
Query: 122 ISCLGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
+S LGA++ + S+ +K E AV E P ATI+RP+ + G D + +
Sbjct: 173 LSALGATTQPQKGHFVAKSQFLHSKGLGEVAVREEFPEATIIRPSVIYGELDGFIQYYVS 232
Query: 175 FVKK--FNFFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+K ++ L+ G T P++V DVAA + +A+ +D T+ G YE GP + + E
Sbjct: 233 RWRKTPLDYVYLYKKGEETYKMPIWVGDVAAGIQSAV-NDPTAKGHTYEFVGPHCYQLSE 291
Query: 232 LAELMYD---TIREYPHYVK---VPFPVAKAVAMPREILLK--KVPFPLPRPGLFNLDEI 283
L + MY + ++ K +P P A+ M E+ K K PL R + E
Sbjct: 292 LIDFMYKKAHCLSDFGFRYKRHGMPDPYFMALTMATELYGKVFKCKVPLNREWM----EF 347
Query: 284 NAYTSDTIVSDNALTFQDLGI 304
SD + + L DLG+
Sbjct: 348 VEVQSDILTGERTLA--DLGV 366
>gi|402850003|ref|ZP_10898220.1| NAD-dependent epimerase [Rhodovulum sp. PH10]
gi|402499754|gb|EJW11449.1| NAD-dependent epimerase [Rhodovulum sp. PH10]
Length = 335
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 158/320 (49%), Gaps = 17/320 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LA ++ + R D HL+ +G +GQI P++ N R+ +
Sbjct: 19 LVTVFGGSGFLGRHVVRALAPDLWRLRIAVR-RPDLAGHLQPLGRVGQIHPVQANLRNAD 77
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + + VVINL+G +E +FE V+ +A A R + +S +GA
Sbjct: 78 SIARAVEGSAVVINLVGILFEKGKQNFEAVH--LAGAEAVAKAAAAQGARLVHVSAIGAD 135
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ + TK AE+AVL P A I+RP+ + G +D NK+ + PL G G
Sbjct: 136 PNGRALYARTKGRAEQAVLAAAPDAVILRPSVIFGPDDDFFNKFGSMARFAPVLPLIGGG 195
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPV+ DV AV A + G IYELGGPD+ T E+ L+ +
Sbjct: 196 RTKFQPVFGGDVGEAVRKAAAGEARP-GTIYELGGPDVMTFKEILRLVLQVTERRRLLLP 254
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLGI 304
VPF AK + +LK +P P P D++ D +VSD A+ T DLGI
Sbjct: 255 VPFWAAKLLGA----MLKILPTPPLTP-----DQVELLKVDNVVSDAAVAEHRTLADLGI 305
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P YL YRK G
Sbjct: 306 DPRPPAAILPSYLWRYRKTG 325
>gi|329115659|ref|ZP_08244381.1| NAD-Dependent Epimerase/Dehydratase [Acetobacter pomorum DM001]
gi|326695087|gb|EGE46806.1| NAD-Dependent Epimerase/Dehydratase [Acetobacter pomorum DM001]
Length = 317
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 159/316 (50%), Gaps = 15/316 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
IATV G GF+GRYVVQ LA+ G +V V R + R L+ +G +GQI P + DD
Sbjct: 6 IATVLGGGGFVGRYVVQNLARAGYEVRVASRRPDLTAR-LRTLGYVGQIAPFYASVLDDA 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+VVINL+ + + + VN A R+A IA E + F+Q+S LGAS
Sbjct: 65 SVACAVQGADVVINLVAVLSSVKQQTLQAVNVEGAGRVARIAAETD-VPVFVQMSALGAS 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ S ++AA E+ V + P A I+RP+ + G ED N +A + P++G
Sbjct: 124 ETALSAYGRSRAAGEKVVRQYRPDAVIIRPSVIFGPEDHFFNMFAGLARYLPCLPVYG-A 182
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+R+QPVY DVA AV A + + GK LGGP T+ ++A + + +
Sbjct: 183 HSRLQPVYAGDVAQAVLVAAQSSAFA-GKELLLGGPQEMTMLDIARFVLRVTQRHKPVFI 241
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLF-NLDEINAYTSDTIVSDNALTFQDLGIVPH 307
VP +AK AM E L PG F D++ +D +V F+ L IVP
Sbjct: 242 VPSVLAKLQAMVLERL----------PGHFLTQDQLRMLATDNVVPAGKSGFEALNIVPQ 291
Query: 308 KLKGYPTEYLIWYRKG 323
+ YL +R G
Sbjct: 292 SVAAIVPSYLARFRVG 307
>gi|27375828|ref|NP_767357.1| oxidoreductase [Bradyrhizobium japonicum USDA 110]
gi|27348966|dbj|BAC45982.1| oxidoreductase [Bradyrhizobium japonicum USDA 110]
Length = 321
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 163/322 (50%), Gaps = 21/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR VV+ L K +V V R E +L+ G +GQ+ ++ N R
Sbjct: 8 LVTVFGGSGFLGRNVVRALCKRDYRVRVAVRRPEL-AGYLQPSGKVGQVHVVQANLRYPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A + ++VVINL+G E+ SF+ V R + +S +GA
Sbjct: 67 SVEAALRDSDVVINLVGILTESGKQSFDAVQA--KGAETVAKAAAAVGARLVHVSAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ SPSR KAA E AVL +P ATI RP+ M G ED+ N++A + PL G G
Sbjct: 125 AESPSRYAKAKAAGEAAVLAAVPSATIFRPSVMFGPEDQFTNRFAALARMSPVLPLIG-G 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T++QPVYV DVA A+ A+ D G YELGGP++ T+ E+ E + + P V
Sbjct: 184 ETKMQPVYVGDVATAIADAV-DGKAKAGATYELGGPEVLTMREIIEAILEITARKPTLVP 242
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDL 302
+PF +A+ A F PG F L D++ D +VSD A LT + L
Sbjct: 243 LPFGLARFQAN----------FLQFAPGAFKLTPDQVTLLQRDNVVSDAAKAAGLTLEGL 292
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI L+ +YL +R G
Sbjct: 293 GITADSLEAIAPQYLWRFRAAG 314
>gi|393720747|ref|ZP_10340674.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingomonas
echinoides ATCC 14820]
Length = 310
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 155/319 (48%), Gaps = 26/319 (8%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPR 65
+ T+ G GFLGRYV Q L G++V R + DPR LK G LGQ + +
Sbjct: 5 LVTLIGGGGFLGRYVAQALLARGARV----RIAQRDPRQAFFLKPQGGLGQTQFVAADLL 60
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+I +A ++VV+NL+G F+ + RI A + G+ + IS +
Sbjct: 61 KPESIARAVAGSDVVVNLVG----ILAGDFQRI-QVEGARIVAEAAKTAGVGHLVHISAI 115
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA +SPS +K E AV P ATI+RP+ + G ED+ +N++A+ + P+
Sbjct: 116 GADPASPSAYGRSKGEGEAAVRAAFPGATILRPSIVFGREDQFINRFAKMIASAPIVPVL 175
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G T+ QPVYV DVA AV AAL+ + GK +ELGGPD+ ++ L + +R P
Sbjct: 176 RAG-TKFQPVYVGDVADAVVAALEHPALASGKTFELGGPDVLSMGALVRWIAKAVRRTPP 234
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS-DNALTFQDLGI 304
V++P V A+A F D+ +D +VS N LT LGI
Sbjct: 235 IVELPDAVGGAIAA----------FGFLPGAPITADQWKMLANDNVVSGKNGLT--ALGI 282
Query: 305 VPHKLKGYPTEYLIWYRKG 323
P L +L+ YRKG
Sbjct: 283 TPTPLDAVAAGWLVQYRKG 301
>gi|238579827|ref|XP_002389170.1| hypothetical protein MPER_11741 [Moniliophthora perniciosa FA553]
gi|215451144|gb|EEB90100.1| hypothetical protein MPER_11741 [Moniliophthora perniciosa FA553]
Length = 285
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 129/210 (61%), Gaps = 14/210 (6%)
Query: 30 MGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYE 89
M +QV+VPFR EDD RH KLMGDLGQIV ++++ R++ I + +++V NL+GR+YE
Sbjct: 1 MVTQVMVPFRD-EDDKRHSKLMGDLGQIVSLEWDIRNEEQIAECVRHSDIVFNLVGRDYE 59
Query: 90 TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRE 149
T+N+SF++V+ AERIA +A + G+ R + +S L ASS+S S+ + TKA EE V
Sbjct: 60 TKNFSFKNVHADGAERIAKVAAQ-VGVPRLVHLSHLNASSTSESKFYQTKAEGEERVKAV 118
Query: 150 LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF---GDGSTRIQPVYVVDVAAAVTA 206
ATI+RPA M G EDR LN A +P++ D T+ +PV+V+DVA A+
Sbjct: 119 YDGATIVRPATMYGYEDRFLNNMA-------VWPIWWKLNDAKTKTRPVHVMDVAQALAN 171
Query: 207 ALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+ G + + L GP T L +L+
Sbjct: 172 LVH--GPKLSRTVNLPGPSTLTHEYLLDLV 199
>gi|300023845|ref|YP_003756456.1| NAD-dependent epimerase/dehydratase [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525666|gb|ADJ24135.1| NAD-dependent epimerase/dehydratase [Hyphomicrobium denitrificans
ATCC 51888]
Length = 324
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 165/320 (51%), Gaps = 21/320 (6%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G +ATVFG +GF+GR +V LA+ +V R D +L+ MG +GQ+ ++ N R
Sbjct: 4 TGKLATVFGGSGFVGRQIVWSLARRDYRVRAAVR-RPDLAGYLQPMGVVGQVFGVQANLR 62
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+++ + A V+N +G T +F+DV+ A RIA A+E G R + IS +
Sbjct: 63 FADSVMRAVEGAETVVNSVGILAPTGAQTFQDVHVEGARRIAKAAREAGA-QRLVHISAI 121
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA+ +S S+ +KA E AVL E P A I+RP+ + G ED+ N++A + PL
Sbjct: 122 GANKNSNSKYAVSKAEGEAAVLAEFPSAIILRPSIVFGPEDQFFNRFAALARVSPVLPLV 181
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G T+ QPV+ DV AV A+ G + G++YELGGP + T E+ E
Sbjct: 182 GGGRTKFQPVFSGDVGEAVANAVTGSGKA-GEVYELGGPQVVTFREILESTVQYAGRRRV 240
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLP---RPGLFNLDEINAYTSDTIVSDNA----LT 298
+ VPF + K A+ + +PLP RP +D++ D +VSD A T
Sbjct: 241 LLPVPFWMMKLQAL--------LTWPLPNAVRP--VTVDQLRLLKLDNVVSDAAKREDRT 290
Query: 299 FQDLGI-VPHKLKGYPTEYL 317
LG+ P ++ +YL
Sbjct: 291 IAALGVPQPASIEAIVPQYL 310
>gi|373450595|ref|ZP_09542573.1| putative NAD-dependent epimerase/dehydratase [Wolbachia pipientis
wAlbB]
gi|371932197|emb|CCE77584.1| putative NAD-dependent epimerase/dehydratase [Wolbachia pipientis
wAlbB]
Length = 321
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 161/317 (50%), Gaps = 12/317 (3%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+FG TGF+G+++V++LA G + + F ++ LKL G+LGQI ++ + ++ +I
Sbjct: 11 VIFGGTGFIGKHIVRRLAAAGYLIRI-FTRDQEKAACLKLCGNLGQISIIEGDFFNEKSI 69
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+M +VVINL+G YE R Y F DV+ +AERIA A + + I S +G +S
Sbjct: 70 LESMEGCDVVINLVGILYEKRKYDFYDVHVGVAERIAK-AAQIKSVYMMIHFSAMGIENS 128
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
SR +K E+AV A I++P+ + G ED NK+A+ F PL G G T
Sbjct: 129 KLSRYAHSKLEGEKAVTSAFQGAIIIKPSLVFGKEDSFFNKFARLATILPFLPLIGSGIT 188
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
+ QP+ V ++A V + + KIY +GGP +++ L + + + + VP
Sbjct: 189 KFQPICVTNLAEVVYRIISFNKQD-KKIYNIGGPKVYSFKSLLKFILNVTNRKCLLINVP 247
Query: 251 FPVAKAVAMPRE-----ILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
FP+A+ +A E +LLK P + D++ S +I + L + I
Sbjct: 248 FPMARLIAFFLESKVVSVLLK--PITGDASPILTRDQVKVMMSSSIEKSDDLG--TMKIR 303
Query: 306 PHKLKGYPTEYLIWYRK 322
P ++ EYL YRK
Sbjct: 304 PLAIENVVPEYLKIYRK 320
>gi|224010401|ref|XP_002294158.1| nadh-ubiquinone oxidoreductase [Thalassiosira pseudonana CCMP1335]
gi|220970175|gb|EED88513.1| nadh-ubiquinone oxidoreductase [Thalassiosira pseudonana CCMP1335]
Length = 319
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 155/321 (48%), Gaps = 15/321 (4%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G+ VFG TGFLGRYV L G V R E RHL+ +LG+ ++ R
Sbjct: 9 AGVKVCVFGATGFLGRYVTSGLGTNGVLTYVGSRQDEFAYRHLRPHFELGRAKFQFYSSR 68
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYS--FEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
D ++ +A A++VINLIG+ Y+T+N S + N + + IA + E + I +S
Sbjct: 69 DKQSMADLIADADIVINLIGKYYDTKNVSTSVHEANVEVPKTIAELCTEMQ-VDNLIHVS 127
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A+ S S TK EE VL+ PWATI+RP M G ED+LLN +A +F P
Sbjct: 128 SAAANPDSSSEWARTKFEGEEEVLKAYPWATIVRPTQMFGHEDKLLNWFANMADRFPVVP 187
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G QPV+V DVA + + D G+ + GP ++ ELA +YD +
Sbjct: 188 LVDGGHALTQPVWVDDVAKVINRIVDDPEMFEGRRVDCFGPQDYSYAELARFVYDITGQN 247
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ--- 300
P ++P PVAK LL+ P P L +L ++ D + A ++
Sbjct: 248 PTLSEIPVPVAKYAGN----LLQYEGNPYMTPDLIDL-----WSEDYLPEMTAEEYEAQP 298
Query: 301 DLGIVPHKLKGYPTEYLIWYR 321
DLG+ ++ YL +R
Sbjct: 299 DLGVEATPIEKVAFRYLHRFR 319
>gi|188580578|ref|YP_001924023.1| NADH dehydrogenase [Methylobacterium populi BJ001]
gi|179344076|gb|ACB79488.1| NADH dehydrogenase [Methylobacterium populi BJ001]
Length = 389
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 160/320 (50%), Gaps = 9/320 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LAK G ++ V R D L+ +G +GQIV ++ N R +
Sbjct: 18 LVTVFGGSGFLGRHVVRALAKRGYRIRVAVR-RPDLALFLQPLGKVGQIVAVQANLRYPD 76
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I+ + +++VINL+G ET + F + A IA A + + +S LGA
Sbjct: 77 SIRRAVEHSDIVINLVGILQETGSQRFSKLQTEGAGEIARAAAAV--GAKLVHVSALGAD 134
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SPS +KA E VLR P A I RP+ + G D N++A PL G
Sbjct: 135 PDSPSLYARSKALGEAQVLRACPDAVIFRPSLVFGPGDSFFNRFAALATFLPALPLAG-A 193
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+R QPV+V DVA A+ A+ D G++YELGGP++ T+ M + +
Sbjct: 194 QSRFQPVFVGDVAEAIARAV-DGLVPGGRVYELGGPEVNTLEYFVRYMLEVTMRRRAVLD 252
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+P PVA+ A EI LP D++ +D +VSD A T + LGI
Sbjct: 253 LPEPVARLQARVIEIADTLTLGLLPANFKLTRDQVTLLQTDNVVSDAAKAEGRTIEALGI 312
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
VP ++ YL +RK G
Sbjct: 313 VPTAVEAIVPGYLWRFRKAG 332
>gi|170747481|ref|YP_001753741.1| NADH dehydrogenase (ubiquinone) [Methylobacterium radiotolerans JCM
2831]
gi|170654003|gb|ACB23058.1| NADH dehydrogenase (ubiquinone) [Methylobacterium radiotolerans JCM
2831]
Length = 412
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 165/321 (51%), Gaps = 11/321 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GFLGR+VV+ LAK G ++ V R D L+ +G + QIV ++ N R +
Sbjct: 34 LVTIYGGSGFLGRHVVRALAKRGYRIRVAVR-RPDLALFLQPLGKVNQIVAVQANLRYPD 92
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ +++V+INL+G ET + SF + AE IA A G M IQ+S +GA
Sbjct: 93 SVARAAERSDVLINLVGILQETGSQSFARLQVDGAEAIARAAARQGARM--IQVSAIGAD 150
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E V P A + RP+ + G D N++A + PL G G
Sbjct: 151 PASPSLYARTKAEGEARVFAACPDAVVFRPSLIFGPGDSFFNRFAGLARALPVLPLAG-G 209
Query: 189 STRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
+R QP +V DVA A+ A+ DGT + GK+YELGGP++ T+ M TIR V
Sbjct: 210 QSRFQPAFVGDVAEAIARAV--DGTVAPGKVYELGGPEVGTLEHFVRYMLKTIRRKRVVV 267
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+P P AK A EI LP D++ +D +VS+ A TF+ +G
Sbjct: 268 DLPVPAAKLQARMLEIADTLTFGLLPDSLKLTRDQVTLLQNDNVVSEAAKAEGRTFEGIG 327
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL +RK G
Sbjct: 328 ITPTAAEAVVPGYLWTFRKAG 348
>gi|300112818|ref|YP_003759393.1| NAD-dependent epimerase/dehydratase [Nitrosococcus watsonii C-113]
gi|299538755|gb|ADJ27072.1| NAD-dependent epimerase/dehydratase [Nitrosococcus watsonii C-113]
Length = 308
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 16/302 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG TGFLG +VQ+L + G +V + R PR L L GQI + + RD++
Sbjct: 11 LVTVFGGTGFLGSTIVQRLVESGMRVRIAAR----HPRALDLAEARGQIALQRADVRDED 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A V+N +G E +F ++ AER+A A E GI R I IS +G
Sbjct: 67 SVAEALKGATGVVNAVGLYVEQGQATFRAIHEEGAERVARRAGE-AGIRRLIHISGIGVD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+S S +A E+ V P AT++RP+ + G D LN + V + PLFG G
Sbjct: 126 PASASNYVRARAYGEQRVREVFPNATLLRPSVLFGPNDAFLNSL-KTVTRLPIVPLFGRG 184
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
STR+QPVYV DVA AV L+ T+ G+ +ELGG + ++ + + + +
Sbjct: 185 STRLQPVYVEDVARAVLQVLEMPDTN-GRTFELGGARAYRYRDIIKRVLTHLGRRRLLLP 243
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
VPF V + LL ++ LP L LD++ ++ +V+ A TF DLGI P
Sbjct: 244 VPFVVWR--------LLARIASLLPNTPL-TLDQVILMETNNVVNAKANTFNDLGIEPCS 294
Query: 309 LK 310
L+
Sbjct: 295 LE 296
>gi|190571246|ref|YP_001975604.1| NADH-ubiquinone oxidoreductase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357518|emb|CAQ54955.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
Length = 316
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 161/316 (50%), Gaps = 12/316 (3%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG TGF+G+++V++LA G + + F ++ LKL G+LGQI ++ + ++ +I
Sbjct: 7 IFGGTGFIGKHIVRRLAAAGYLIRI-FTRDQEKAACLKLCGNLGQISIIEGDFFNERSIL 65
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+M +VVINL+G YE R Y F DV+ +AER+A A + + I S +G +S
Sbjct: 66 ESMEGCDVVINLVGILYEKRKYDFYDVHVRVAERVAK-AAQIKSVYMMIHFSAMGIENSK 124
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
SR +K E+AV A I++P+ + G ED NK+A+ F PL G G T+
Sbjct: 125 LSRYAHSKLEGEKAVTSAFQGAIIIKPSLVFGKEDSFFNKFARLATILPFLPLIGSGITK 184
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
QP+ V ++A V + + KIY +GGP +++ L + + + + VPF
Sbjct: 185 FQPICVTNLAEVVYRIISFNKQD-KKIYNIGGPKVYSFKSLLKFILNVTNRKCLLINVPF 243
Query: 252 PVAKAVAMPRE-----ILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
P+A+ +A E +LLK P + D++ S +I + L + I P
Sbjct: 244 PMARLIAFFLESKVVSVLLK--PITGDASPILTRDQVKVMMSSSIEKSDDLG--TMKIRP 299
Query: 307 HKLKGYPTEYLIWYRK 322
++ EYL YRK
Sbjct: 300 LAIENVVPEYLKIYRK 315
>gi|452823449|gb|EME30459.1| NADH dehydrogenase [Galdieria sulphuraria]
Length = 313
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 16/316 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLG-QIVPMKFNPRDD 67
I TVFG TGF+GR ++ L + V R + + + DL I ++ +
Sbjct: 5 IVTVFGATGFIGREFLRCLDREKRDFSV-VRILSRKNKDISFLEDLNLNIEYIQGSITSQ 63
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
++ + A+ V+NL+G Y TRN SF+ ++H + IA I G + +F+ IS LG+
Sbjct: 64 KDVETAIKGASHVVNLVGILYPTRNSSFDSIHHESVKNIARICNS-GSVQQFVHISALGS 122
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
S S S TKA E+A L P +T+++P+ + G ED N++ + K PL G
Sbjct: 123 SLDSSSEYARTKALGEKAALSLFPQSTVLKPSIVYGPEDDFFNRFYRMAKISPVLPLVGG 182
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELM--YDTIREYP 244
G T+ QPVYV DVA A+ L + + + GK+YELGGP + T +L LM Y
Sbjct: 183 GQTQFQPVYVSDVAQAILVCLDEKQSVVGGKVYELGGPHVKTFRQLLRLMLRYSDPPLKR 242
Query: 245 HYVKVPFPVAKAVAMPREI---LLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
V +PF +AK ++ E+ L P + +D++ +D IV+ +L D
Sbjct: 243 LLVPMPFWLAKTQSIVFELAHQLFGVAP-------MLTMDQVELLKTDNIVTAGSLNLLD 295
Query: 302 LGIVPHKLKGYPTEYL 317
LGI P KL YL
Sbjct: 296 LGITPKKLSKDTLSYL 311
>gi|213018644|ref|ZP_03334452.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
gi|212995595|gb|EEB56235.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
Length = 321
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 161/316 (50%), Gaps = 12/316 (3%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG TGF+G+++V++LA G + + F ++ LKL G+LGQI ++ + ++ +I
Sbjct: 12 IFGGTGFIGKHIVRRLAAAGYLIRI-FTRDQEKAACLKLCGNLGQISIIEGDFFNERSIL 70
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+M +VVINL+G YE R Y F DV+ +AER+A A + + I S +G +S
Sbjct: 71 ESMEGCDVVINLVGILYEKRKYDFYDVHVRVAERVAK-AAQIKSVYMMIHFSAMGIENSK 129
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
SR +K E+AV A I++P+ + G ED NK+A+ F PL G G T+
Sbjct: 130 LSRYAHSKLEGEKAVTSAFQGAIIIKPSLVFGKEDSFFNKFARLATILPFLPLIGSGITK 189
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
QP+ V ++A V + + KIY +GGP +++ L + + + + VPF
Sbjct: 190 FQPICVTNLAEVVYRIISFNKQD-KKIYNIGGPKVYSFKSLLKFILNVTNRKCLLINVPF 248
Query: 252 PVAKAVAMPRE-----ILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
P+A+ +A E +LLK P + D++ S +I + L + I P
Sbjct: 249 PMARLIAFFLESKVVSVLLK--PITGDASPILTRDQVKVMMSSSIEKSDDLG--TMKIRP 304
Query: 307 HKLKGYPTEYLIWYRK 322
++ EYL YRK
Sbjct: 305 LAIENVVPEYLKIYRK 320
>gi|365881477|ref|ZP_09420784.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365290318|emb|CCD93315.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 322
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 164/321 (51%), Gaps = 18/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV+ LAK ++ V R E HL+ +G +GQI ++ N R +
Sbjct: 8 LVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPEL-AGHLQPLGRVGQIHTVQANLRYPD 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAE-RIAGIAKEHGGIMRFIQISCLGA 127
++ A + ++V INL+G E+ +F+ V AE R + +S +GA
Sbjct: 67 SVAAALRDSHVAINLVGILTESGAQTFDAVQ---AEGAATVAKAAAAAGARLVHVSAIGA 123
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ S S KAA E A L +P A IMRP+ + G ED+ N++A + F PL G
Sbjct: 124 DAESASSYARAKAAGEAASLAAVPEAVIMRPSVVFGPEDQFTNRFAALARVAPFLPLVGG 183
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G T++QPVYV DVA A+ A+ D G YELGGP++ + E+ +++ D +
Sbjct: 184 GETKMQPVYVGDVATAIADAV-DGKAQAGATYELGGPEVLSFREILKIILDITDRDRALL 242
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +AK A L+ P PL D++ D +VS+ A LT Q LG
Sbjct: 243 PLPFGLAKLQAA----FLQFAPGPLK----LTPDQVELLRQDNVVSEAATAAGLTLQGLG 294
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P L+ +YL +R G
Sbjct: 295 ITPDSLEAIGPQYLWRFRPAG 315
>gi|374571778|ref|ZP_09644874.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
WSM471]
gi|374420099|gb|EHQ99631.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
WSM471]
Length = 321
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 166/322 (51%), Gaps = 21/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR VV+ L + +V V R E +L+ G +GQ+ ++ N R
Sbjct: 8 LVTVFGGSGFLGRNVVRALCRRDYRVRVAVRRPEL-AGYLQPSGKVGQVHTVQANVRYPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I+A + ++VVINL+G E SF+ V AE IA A + I +S +GA
Sbjct: 67 SIEAALRDSHVVINLVGILAEGGAQSFDAVQARGAETIAKAAAAA--GAQLIHVSAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ SPSR KAA E A++ +P ATI RP+ M G ED+ N++A + PL G
Sbjct: 125 AESPSRYARAKAAGEAAIMAAVPSATIFRPSVMFGPEDQFTNRFAALARMLPVLPLIG-A 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR+QPVYV DVA AV A+ D G YELGGP++ T+ E+ E + + P +
Sbjct: 184 DTRMQPVYVGDVATAVADAV-DGKAKAGATYELGGPEVLTMREIIEAILEIADRKPMLLP 242
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDL 302
+PF +A+ K F PG L D++ D +VSD A LT + L
Sbjct: 243 LPFGLARF----------KANFLQFAPGALKLTPDQVTLLARDNVVSDAAKAAGLTLEGL 292
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P L+ +YL +R G
Sbjct: 293 GIAPDSLEAIAPQYLWRFRAAG 314
>gi|291334143|gb|ADD93813.1| NADH ubiquinone oxidoreductase 40 kDa subunit [uncultured marine
bacterium MedDCM-OCT-S05-C362]
Length = 280
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 147/287 (51%), Gaps = 16/287 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED--DPRHLKLMGDLGQIVPMKFNPRD 66
+ V G GF+GR VV++L K G +V V GC D + L+ MGD+GQ+ +K N +
Sbjct: 5 VVAVVGGAGFVGRNVVRELCKKGVRVNV---GCRDTESAKFLRSMGDVGQVNLIKVNVAN 61
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + + A+ VI+L+G +ET+ +FE V + IA+E + + +S +G
Sbjct: 62 YDQMARLIEGADYVISLVGILHETKGNTFETVQAKGPMLVGKIAREKN-VRSLVHVSAIG 120
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +S S S+K E + E I+RP+ + G +D N++A F PL G
Sbjct: 121 ADVNSKSLYASSKGLGESYIRDEFEKTVILRPSIIFGPDDNFFNRFANLAAFAPFLPLIG 180
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G+T+ QPVYV DVA+A+ L +D +G YELGGP I++ EL EL+
Sbjct: 181 GGTTKFQPVYVQDVASAIMVVL-EDSAKVGNDYELGGPSIYSFKELLELLEKHTLRKRAL 239
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293
V +PF +A A EI LP P L D++ +D IVS
Sbjct: 240 VNIPFFLASLQAKLLEI--------LPNPPL-TRDQVQLLKTDNIVS 277
>gi|402773021|ref|YP_006592558.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. SC2]
gi|401775041|emb|CCJ07907.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. SC2]
Length = 343
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 161/323 (49%), Gaps = 9/323 (2%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G + TVFG +GF+GRYVV+ LA+ G +V V R D L+ +G +GQ++ ++ N R
Sbjct: 12 GRVVTVFGGSGFVGRYVVRALARDGWRVRVACR-RPDLAFFLQPLGRVGQVMAVQANVRS 70
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I A + A+ V+NL+G ET F V A R+ A + GI + IS +G
Sbjct: 71 PESIAAALRGASAVVNLVGILAETGAQKFATVQARGA-RVIAEAAKAAGIANVVHISAIG 129
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A SPS +KA E A+L +P I+RP+ + G ED N++A + F P+ G
Sbjct: 130 ADPQSPSSYGRSKAEGEAAMLAAVPSTVILRPSVIFGPEDDFFNRFATMARYFPVVPIVG 189
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
T+ QPVYV DVA AV AL G YELGGP++ + E+ + + +
Sbjct: 190 -AETKFQPVYVGDVADAVAIALAGRAKP-GVAYELGGPEVKSFAEIVDYVLKVTQRQRRI 247
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD----NALTFQDL 302
+K+ F K +A ++L K P+ D++ D +VS+ A T L
Sbjct: 248 LKLSFGTGKLMASVTQLLTKLSLGLFPKLLRMTRDQVELLKHDNVVSEAAKAEARTLSGL 307
Query: 303 GIV-PHKLKGYPTEYLIWYRKGG 324
GI P ++ YL YRK G
Sbjct: 308 GIAEPQSIEAIAPSYLYRYRKAG 330
>gi|456351717|dbj|BAM86162.1| conserved hypothetical protein [Agromonas oligotrophica S58]
Length = 326
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 165/321 (51%), Gaps = 18/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV+ LAK ++ V R E HL+ +G +GQI ++ N R +
Sbjct: 12 LVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPEL-AGHLQPLGRVGQIHTVQANLRYPD 70
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAE-RIAGIAKEHGGIMRFIQISCLGA 127
++ + + ++V INL+G E +F N AE R + +S +GA
Sbjct: 71 SVASALRDSHVAINLVGILTEGGAQTF---NAVQAEGAATVAKAAAAADARLVHVSAIGA 127
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ S S KAA E AVL +P A IMRP+ + G ED+ N++A + F PL G
Sbjct: 128 DAESASSYARAKAAGEAAVLAAVPEAVIMRPSVVFGPEDQFTNRFAGLARMSPFLPLIGG 187
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G T++QPVYV DVA+AV A+ D G YELGGP++ + E+ +++ D +
Sbjct: 188 GETKMQPVYVGDVASAVADAV-DGKAQAGATYELGGPEVLSFREILKIILDITDRDRALL 246
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +AK A +L+ P PL D++ D +VS+ A LT Q LG
Sbjct: 247 PLPFGLAKLQAA----VLQFAPGPLK----LTPDQVELLRHDNVVSEAAKAAGLTLQGLG 298
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P L+ +YL +R G
Sbjct: 299 ITPDSLEAVAPQYLWRFRPSG 319
>gi|154289498|ref|XP_001545366.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Botryotinia
fuckeliana B05.10]
Length = 251
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 112/173 (64%), Gaps = 2/173 (1%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TGFLGRY+V +LA+ G V++PFR E RHLK+ GDLG+++ M+++ R+
Sbjct: 56 GHTATVFGATGFLGRYIVNRLARQGCTVIIPFRE-EMAKRHLKVSGDLGRVIFMEYDLRN 114
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+++ ++ ++VV NL+GR Y T+N+ EDV+ AERIA ++ + RFI +S
Sbjct: 115 TQSLEESVRHSDVVYNLVGRNYPTKNFDLEDVHVEGAERIADAVAKY-DVDRFIHLSSYN 173
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKF 179
A +SPS + TKA EE V P TI+RPA + G EDRLL+K A F F
Sbjct: 174 ADPNSPSEFYRTKARGEEVVRSIFPETTIVRPAPLFGFEDRLLHKLAGFTNIF 226
>gi|334345535|ref|YP_004554087.1| NAD-dependent epimerase/dehydratase [Sphingobium chlorophenolicum
L-1]
gi|334102157|gb|AEG49581.1| NAD-dependent epimerase/dehydratase [Sphingobium chlorophenolicum
L-1]
Length = 312
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 162/324 (50%), Gaps = 20/324 (6%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
M V + TVFG GFLGR V Q L G++V V R R +K +G LGQ +
Sbjct: 1 MGRVMKDSLVTVFGGGGFLGRQVAQALMARGARVRVAQRDLATALR-VKPLGGLGQTQFV 59
Query: 61 KFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+ R ++ +A +++V+NL+G + FE +H A +A A G + +
Sbjct: 60 AADIRKPESVARAIAGSDIVVNLVG----VLSGDFEGSHHDGAANVAKAAAAAG-VKALV 114
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
IS +GA + S S +KAA EEAV P ATI+RP+ + G ED+ LN++A+ V+
Sbjct: 115 HISAIGADAQSASAYGRSKAAGEEAVKAAFPNATIVRPSIVFGPEDQFLNRFAEIVRLAP 174
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
P+ G +T+ QPVYV DVA A+ A ++ G GK YELGGP +++ EL + I
Sbjct: 175 VVPVIG-ATTKFQPVYVADVAQAIANAAENPGLHGGKTYELGGPQTYSMLELNAWIAKAI 233
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
VP +A +A+ LP G D++ D +V+ A T
Sbjct: 234 GRERSLCAVPASIASLIAL------------LP-GGPITRDQLAMLGKDNVVAPGANTLA 280
Query: 301 DLGIVPHKLKGYPTEYLIWYRKGG 324
DLG+ P + ++L+ YRK G
Sbjct: 281 DLGVAPTPMPAVAEKWLVRYRKHG 304
>gi|212534332|ref|XP_002147322.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Talaromyces marneffei ATCC 18224]
gi|210069721|gb|EEA23811.1| NADH-ubiquinone oxidoreductase 39 kDa subunit, putative
[Talaromyces marneffei ATCC 18224]
Length = 293
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 149/278 (53%), Gaps = 14/278 (5%)
Query: 46 RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAER 105
RHLK+ GDLG++V M+++ R+ +I+ ++ ++VV NL+GR+Y T+N+++EDV+ AER
Sbjct: 4 RHLKVTGDLGRVVFMEYDLRNTESIEESVRHSDVVYNLVGRDYPTKNFTYEDVHVDGAER 63
Query: 106 IAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTE 165
IA ++ I RFI +S A+ SPS F TK E V P TI+RPA M G E
Sbjct: 64 IAEAVAKY-DIDRFIHVSSYNAAEDSPSEFFKTKGWGERVVRNIFPETTIVRPAPMFGFE 122
Query: 166 DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225
D LL+K A + R PV+ +DV AA+ L DD T+ + +EL GP
Sbjct: 123 DNLLHKLAGVTNLLTSNHM----QERFWPVHAIDVGAALERMLYDDNTA-SQTFELYGPK 177
Query: 226 IFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINA 285
++ ELAE++ I ++ ++ +P KAV P L K L P + + D+I
Sbjct: 178 QYSTAELAEIVDKEIVKHRRHINLP----KAVLKPAAYYLNKF---LWWPTM-SADQIER 229
Query: 286 YTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKG 323
D + A TF+DL I P + YL+ YR
Sbjct: 230 EFIDQHIDPTAKTFKDLDIEPADITSLTYLYLMGYRSS 267
>gi|288956944|ref|YP_003447285.1| NADH dehydrogenase [Azospirillum sp. B510]
gi|288909252|dbj|BAI70741.1| NADH dehydrogenase [Azospirillum sp. B510]
Length = 323
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 164/300 (54%), Gaps = 10/300 (3%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
Y + TVFG +GF+GR+++++LAK G+ + + R LK G +GQIVP +
Sbjct: 3 YRTQVITVFGGSGFIGRHLIRRLAKSGAVIRIATRN-PGKAAFLKTAGAVGQIVPFATDC 61
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
D ++ + A+V INL+G +E + SF+ V H A G+ R + +S
Sbjct: 62 AKDESVARALQGADVAINLLGVLFERGSQSFQGV-HVDAAARIARLAASAGVERLVHLSA 120
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GA +SS S +KAA E AVL P ATI+RP+ + G ED NK+A +K PL
Sbjct: 121 IGADASSASAYARSKAAGETAVLSAFPAATILRPSIVFGPEDNFFNKFAAMAQKAPALPL 180
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G T QPVYV D+A AV AAL D S GK YELGGP ++T EL +L I+ +
Sbjct: 181 IGGGKTLFQPVYVGDLADAVVAALATD-ASRGKTYELGGPRVYTFRELLDLTQKDIQRHR 239
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
V +P+ A+++A L+KVP P + D++ D +VS AL F+DLGI
Sbjct: 240 PLVTIPWNAAESLAG----FLEKVPVLDP---VLTRDQVALLKRDNVVSPTALGFKDLGI 292
>gi|398826440|ref|ZP_10584684.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
YR681]
gi|398221078|gb|EJN07506.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
YR681]
Length = 321
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 166/325 (51%), Gaps = 21/325 (6%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
S + TVFG +GFLGR VV+ L + +V V R E +L+ G +GQ+ ++ N R
Sbjct: 5 SETLVTVFGGSGFLGRNVVRALCRRDYRVRVAVRRPEL-AGYLQPSGKVGQVHIVQANLR 63
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+++A + ++VVINL+G E SF+ V +E +A A R + +S +
Sbjct: 64 YPASVEAALRDSDVVINLVGILAEGGAQSFDAVQAKGSETVAKAAAAA--GARLVHVSAI 121
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA + SPSR KAA E AVL +P ATI RP+ M G ED+ N++A + PL
Sbjct: 122 GADADSPSRYARAKAAGEAAVLAAVPSATIFRPSVMFGPEDQFTNRFAALARMSPVLPLI 181
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G T++QPVYV DVA A+ A+ D G YELGG ++ T+ E+ E + P
Sbjct: 182 G-AETKMQPVYVGDVATAIADAV-DGKAKAGATYELGGAEVLTMREIIETIVAIADRKPM 239
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTF 299
V +PF +A+ K F PG F L D++ D +VSD A LT
Sbjct: 240 LVPLPFGLARF----------KANFLQFAPGAFKLTPDQVTLLARDNVVSDAAKAGGLTL 289
Query: 300 QDLGIVPHKLKGYPTEYLIWYRKGG 324
+ LGI P L+ +YL +R G
Sbjct: 290 EGLGITPDSLEAIAPQYLWRFRPQG 314
>gi|146337299|ref|YP_001202347.1| NAD dependent epimerase/dehydratase [Bradyrhizobium sp. ORS 278]
gi|146190105|emb|CAL74097.1| Conserved hypothetical protein; putative NAD dependent
epimerase/dehydratase family protein [Bradyrhizobium sp.
ORS 278]
Length = 322
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 166/321 (51%), Gaps = 18/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV+ LAK ++ V R E HL+ +G +GQI ++ N R +
Sbjct: 8 LVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPEL-AGHLQPLGRVGQIHTVQANLRYPD 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAE-RIAGIAKEHGGIMRFIQISCLGA 127
++ A + ++V INL+G E+ +F+ V AE R +Q+S +GA
Sbjct: 67 SVAAALRDSHVAINLVGILTESGAQTFDAVQ---AEGAATVAKAAAAAGARMVQVSAIGA 123
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ S S KAA E AVL +P A IMRP+ + G ED+ N++A + F PL G
Sbjct: 124 DAESASAYARAKAAGEAAVLAAVPEAVIMRPSVVFGPEDQFTNRFAGLARIAPFLPLVGG 183
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G T++QPVYV DVA AV A+ D G YELGGP++ + E+ +++ D +
Sbjct: 184 GETKMQPVYVGDVATAVADAV-DGKAQPGATYELGGPEVLSFREILKIILDITDRDRALL 242
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +AK A L+ P PL D++ D +VS+ A LT Q LG
Sbjct: 243 PLPFGLAKLQAT----FLQFAPGPLK----LTPDQVELLRHDNVVSEAAKAAGLTLQGLG 294
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P L+ +YL +R G
Sbjct: 295 ITPDSLEAVGPQYLWRFRPAG 315
>gi|407799440|ref|ZP_11146333.1| NAD-dependent epimerase/dehydratase [Oceaniovalibus guishaninsula
JLT2003]
gi|407058625|gb|EKE44568.1| NAD-dependent epimerase/dehydratase [Oceaniovalibus guishaninsula
JLT2003]
Length = 329
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 164/316 (51%), Gaps = 7/316 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++A+ G +V V R +D ++ G +GQ+ P+ N RDD+
Sbjct: 4 LVTIYGGSGFVGRYIARRMAQQGWRVRVAVR-HPNDAMFVRTYGVVGQVEPVFCNIRDDD 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M A+ V+N +G E+R F+ + H A RIA IA E G+ + +QIS +GA
Sbjct: 63 SVRAVMIGADAVVNSVGILAESRKQGFDALQHEGAARIARIAAER-GVAQLVQISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S TK E AV P A I+RP+ + G ED N++A + F P+ G
Sbjct: 122 EDSRSDYGRTKGLGERAVRDAFPSAVILRPSIVFGHEDEFFNRFAAMTRVSPFLPVVG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+T QPVYV D+A A AL G + IYELGGP+ T +L + M IR +
Sbjct: 181 NTLFQPVYVDDIARAAEMALL--GHAEPGIYELGGPETLTFRQLMQRMLTIIRRRRPIIA 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+PF A + + + L P + D++ D +V TF DLGI P
Sbjct: 239 IPFWAASVMGAVFDFGSRLTGGLLAGP--ISRDQVRNLRRDNVVGGGVRTFADLGIQPTA 296
Query: 309 LKGYPTEYLIWYRKGG 324
++ +YL +R G
Sbjct: 297 MEPVLEDYLWRFRPSG 312
>gi|268564181|ref|XP_002647109.1| Hypothetical protein CBG20301 [Caenorhabditis briggsae]
Length = 428
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 164/321 (51%), Gaps = 32/321 (9%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMK 61
+SG + TVFG +GFLG VV + AK GSQ+++P+R DP R K++G+LGQ++
Sbjct: 57 FSGNVVTVFGASGFLGLPVVNKFAKNGSQIIIPYR---QDPYYMREHKVLGELGQVLYFP 113
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
F +D+ +I+ + +NVV+NLIG T NY++ DV+ A R+A I KE G+ +F+
Sbjct: 114 FELKDEESIRKVVKYSNVVVNLIGTRVPTGNYNYYDVHDTGARRLAKICKEM-GVEKFVH 172
Query: 122 ISCLGASSSSP-------SRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
+S LGA+ P S +KA E AV E P ATI+RP+ + G D + +
Sbjct: 173 LSALGATVDPPKGHFVAKSEFLRSKALGEIAVREEFPEATIIRPSVIYGELDGFIQYYVS 232
Query: 175 FVKK--FNFFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+K + L+ G T P++V DVA + + +D T+ G YE GP + + E
Sbjct: 233 RWRKTPLDHVYLYKKGEQTYKMPIWVGDVAQGIDRVV-NDPTAKGHTYEFVGPHCYQLSE 291
Query: 232 LAELMYDTIREYPHY------VKVPFPVAKAVAMPREILLK--KVPFPLPRPGLFNLDEI 283
L + MY P + +P P A+ + E+ K K PL R + ++
Sbjct: 292 LIDFMYKKAHCLPDFGFRYKRHGLPDPYFMALTLATELYGKVFKCKVPLNREWMEYIEVQ 351
Query: 284 NAYTSDTIVSDNALTFQDLGI 304
N D + + L DLG+
Sbjct: 352 N----DVLTGERTLA--DLGV 366
>gi|148260665|ref|YP_001234792.1| NADH dehydrogenase (ubiquinone) [Acidiphilium cryptum JF-5]
gi|338980526|ref|ZP_08631796.1| NADH dehydrogenase (ubiquinone) [Acidiphilium sp. PM]
gi|146402346|gb|ABQ30873.1| NADH dehydrogenase (ubiquinone) [Acidiphilium cryptum JF-5]
gi|338208559|gb|EGO96408.1| NADH dehydrogenase (ubiquinone) [Acidiphilium sp. PM]
Length = 316
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 163/318 (51%), Gaps = 13/318 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ATVFG +GF+GR+VV++LA G V R E L+ +GD+GQIVP+ ++
Sbjct: 6 VATVFGASGFIGRHVVKRLAAAGWVVRAAMRDTEAGA-FLRPLGDVGQIVPLYAPLDNEA 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A VINL+G E R F+ V H A RIA +A E G+ + +S +GA
Sbjct: 65 ALRRAIEGATCVINLVGILAERRRGDFDRVQHQGAARIATLAAE-AGVRALVHVSAIGAD 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S+ +K E AV P ATI+RP+ + G ED N++ + F P+ +G
Sbjct: 124 PKAASQYARSKGLGEAAVRAAFPAATILRPSIVFGPEDGFFNRFGAMAAQLPFLPVI-EG 182
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV AA+ D G YELGGP++ + +L L Y H
Sbjct: 183 ETKFQPVYVGDVADAVMAAI-DRPELAGATYELGGPEVRSFRDL--LAYINAETGHHRAL 239
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+ P + A + +L+++P L D++ D +V+ NA T DLGIV
Sbjct: 240 IGVP--RWAAWLQASVLQRLPGR-----LLTTDQLLLLRRDNVVARNARTLADLGIVATP 292
Query: 309 LKGYPTEYLIWYRKGGPK 326
+ Y+ YR GG +
Sbjct: 293 IDLVVPSYMRRYRHGGGR 310
>gi|163850440|ref|YP_001638483.1| NADH dehydrogenase [Methylobacterium extorquens PA1]
gi|163662045|gb|ABY29412.1| NADH dehydrogenase [Methylobacterium extorquens PA1]
Length = 389
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 160/320 (50%), Gaps = 9/320 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LAK G ++ V R D L+ +G +GQIV ++ N R +
Sbjct: 18 LVTVFGGSGFLGRHVVRALAKRGYRIRVAVR-RPDLALFLQPLGKVGQIVGVQANLRYPD 76
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I+ + +++VINL+G E+ + F + A IA A + + +S LGA
Sbjct: 77 SIRRAVEHSDIVINLVGILQESGSQRFSKLQTEGAGEIARAAAAV--GAKLVHVSALGAD 134
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SPS +KA E VLR P A I RP+ + G D N++A PL G
Sbjct: 135 PDSPSLYARSKALGEAEVLRASPDAVIFRPSLVFGPGDGFFNRFASLATFLPALPLAG-A 193
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPV+V DVA A+ A+ D + G++YELGGP++ T+ M + +
Sbjct: 194 QTRFQPVFVGDVAEAIARAV-DGLAAGGRVYELGGPEVNTLEYFVRYMLEVTMRRRAVLD 252
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+P PVA+ A EI LP D++ D +VSD A T + LGI
Sbjct: 253 LPEPVARLQARVIEIADTLTLGLLPANLKLTRDQVALLQFDNVVSDAAKAEGRTIEALGI 312
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
VP ++ YL +RK G
Sbjct: 313 VPTAVEAVVPGYLWRFRKAG 332
>gi|326403859|ref|YP_004283941.1| putative NADH dehydrogenase [Acidiphilium multivorum AIU301]
gi|325050721|dbj|BAJ81059.1| putative NADH dehydrogenase [Acidiphilium multivorum AIU301]
Length = 316
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 163/318 (51%), Gaps = 13/318 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ATVFG +GF+GR+VV++LA G V R E L+ +GD+GQIVP+ ++
Sbjct: 6 VATVFGASGFIGRHVVKRLAAAGWVVRAAMRDTEAGA-FLRPLGDVGQIVPLYAPLDNEA 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A VINL+G E R F+ V H A RIA +A E G+ + +S +GA
Sbjct: 65 ALRRAIEGATCVINLVGILAERRRGDFDRVQHQGAARIATLAAE-AGVRALVHVSAIGAD 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S+ +K E AV P ATI+RP+ + G ED N++ + F P+ +G
Sbjct: 124 PKAASQYARSKGLGEAAVKAAFPAATILRPSIVFGPEDGFFNRFGAMAAQLPFLPVI-EG 182
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV DVA AV AA+ D G YELGGP++ + +L L Y H
Sbjct: 183 ETKFQPVYVGDVADAVMAAI-DRPELAGATYELGGPEVRSFLDL--LAYINAETGHHRAL 239
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
V P + A + +L+++P L D++ D +V+ NA T DLGIV
Sbjct: 240 VGVP--RWAAWLQAAVLQRLPGR-----LLTTDQLLLLRRDNVVARNARTLADLGIVATP 292
Query: 309 LKGYPTEYLIWYRKGGPK 326
+ Y+ YR GG +
Sbjct: 293 IDLVVPSYMRRYRHGGGR 310
>gi|393767108|ref|ZP_10355659.1| NADH dehydrogenase (ubiquinone) [Methylobacterium sp. GXF4]
gi|392727371|gb|EIZ84685.1| NADH dehydrogenase (ubiquinone) [Methylobacterium sp. GXF4]
Length = 406
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 161/320 (50%), Gaps = 9/320 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GFLGR+VV+ LAK G ++ V R D L+ +G + QIV ++ N R
Sbjct: 28 LVTIFGGSGFLGRHVVRALAKRGYRIRVAVR-RPDLALFLQPLGKVNQIVAVQANLRYPE 86
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ +++VVINL+G ET + SF + A IA A G M I +S +GA
Sbjct: 87 SVARAAERSDVVINLVGILQETGSQSFARLQVDGAAEIARAAARQGARM--IHVSAIGAD 144
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS TKA E V P A + RP+ + G D N++A + PL G G
Sbjct: 145 PASPSLYARTKAEGEARVFAACPDAVVFRPSLVFGPGDSFFNRFAGLARALPVLPLAG-G 203
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+R QPV+V DVA A+ A+ D GK+YELGGP++ T+ L M TI+ +
Sbjct: 204 QSRFQPVFVGDVAEAIARAV-DGVVPGGKVYELGGPEVATLEHLVRYMLKTIQRKRAVID 262
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+P PVAK A E+ LP D++ +D +VS+ A T + LGI
Sbjct: 263 LPLPVAKIQARLLEVADTLTFGLLPDSLKLTRDQVILLQNDNVVSEAAKAEGRTIEALGI 322
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + YL +RK G
Sbjct: 323 TPTAAEAVVPGYLWPFRKAG 342
>gi|429769674|ref|ZP_19301773.1| NAD dependent epimerase/dehydratase family protein [Brevundimonas
diminuta 470-4]
gi|429186557|gb|EKY27496.1| NAD dependent epimerase/dehydratase family protein [Brevundimonas
diminuta 470-4]
Length = 323
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 154/316 (48%), Gaps = 8/316 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+G VV+ LA+ G +V V R + P L + GD+GQ+ ++ N D
Sbjct: 8 LVTVFGGSGFIGTQVVRALARRGWRVRVAARNAKSAP-VLHMAGDVGQVQVVRCNITDKA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ + A+ VINL+G +ET F+ + H A G+ R IS +GA
Sbjct: 67 AVAQAVHGADAVINLVGILFETGGRKFQTL-HVEGATNVAEAAAAAGVQRLTHISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ + TK AE AV P A I+RP+ + G+ D+ LN++A PL G G
Sbjct: 126 ANGKADYARTKGEAEAAVRAAFPGAVIVRPSIVFGSGDQFLNRFAAMATWSPVLPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV D A A+ A + G+ YELGGP ++T ++ + + +
Sbjct: 186 QTKFQPVYVADAAEAIARATVAP-EAGGETYELGGPSVWTFEDILKFILRETNRRNILLP 244
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+PFPVA+ + L ++P + D++ SD +VS A DLG+
Sbjct: 245 LPFPVARMIGS-----LAQIPAVIGLAPALTKDQVVLLESDNVVSAGAKGLADLGVEASG 299
Query: 309 LKGYPTEYLIWYRKGG 324
L+ YL YR GG
Sbjct: 300 LEAIAPAYLWRYRAGG 315
>gi|225630980|ref|YP_002727771.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia sp. wRi]
gi|225592961|gb|ACN95980.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia sp. wRi]
Length = 316
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 161/316 (50%), Gaps = 12/316 (3%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG TGF+G+++V++LA G + + F ++ LKL G+LGQI K + D+ ++
Sbjct: 7 IFGGTGFIGKHIVRRLAAEGYLIKI-FTRNQEKAACLKLCGNLGQISIFKGDFFDEKSVL 65
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
M + +V INL+G YE + + F V+ +AERIA AK M I S +G +S
Sbjct: 66 EGMEECDVAINLVGILYEAKKHDFYAVHVKIAERIAKAAKMKNVPM-MIHFSAMGIENSK 124
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S+ +K E+AV A I+RP+ + G ED NK+A+ F PL G+G+T+
Sbjct: 125 LSKYAKSKLEGEKAVTSAFQKAIIIRPSLVFGKEDNFFNKFARLATILPFLPLIGNGTTK 184
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
QP+ V D+A V + + KIY +GGP +++ L + + + + V F
Sbjct: 185 FQPICVTDLAEVVYRIISFNKQD-KKIYNMGGPKVYSFKSLLKFILNVTNRKCLLINVSF 243
Query: 252 PVAKAVAMPRE-----ILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
P+AK +A E +LLK P + D++ + +I + ++ + + + P
Sbjct: 244 PMAKLIAFFLENKIISMLLK--PITGDTNPMLTQDQVKVMMNSSI--EKSVDLETMKVRP 299
Query: 307 HKLKGYPTEYLIWYRK 322
++ EYL YRK
Sbjct: 300 LAIENVVPEYLKIYRK 315
>gi|308474703|ref|XP_003099572.1| hypothetical protein CRE_29071 [Caenorhabditis remanei]
gi|308266584|gb|EFP10537.1| hypothetical protein CRE_29071 [Caenorhabditis remanei]
Length = 430
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 164/321 (51%), Gaps = 32/321 (9%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMK 61
+SG + TVFG +GFLG VV + AK GSQ+++P+R DP R K++G+LGQ++
Sbjct: 59 FSGNVVTVFGASGFLGLPVVNKFAKNGSQIIIPYR---QDPYYMREHKVLGELGQVLYFP 115
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
F +D+ +I+ + +NVV+NLIG T NY++ DV+ A R+A I KE G+ +F+
Sbjct: 116 FELKDEESIRKVVKYSNVVVNLIGTRVPTGNYNYYDVHDTGARRLAKICKEM-GVEKFVH 174
Query: 122 ISCLGASSSSP-------SRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
+S LGA+ P S +KA E AV E P ATI+RP+ + G D + +
Sbjct: 175 LSALGATVDPPKGHFVAKSEFLRSKALGEIAVREEFPDATIIRPSVIYGELDGFIQYYVS 234
Query: 175 FVKK--FNFFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+K + L+ G T P++V DVA + + +D T+ G YE GP + + E
Sbjct: 235 RWRKTPLDHVYLYKKGEQTYKMPIWVGDVAQGIDRVV-NDPTAKGHTYEFVGPHCYQLSE 293
Query: 232 LAELMYDTIREYPHY------VKVPFPVAKAVAMPREILLK--KVPFPLPRPGLFNLDEI 283
L + MY P + +P P A+ + E+ K K PL R + ++
Sbjct: 294 LIDFMYKKAHCLPDFGFRYKRHGLPDPYFMALTLATELYGKVFKCKVPLNREWMEYIEVQ 353
Query: 284 NAYTSDTIVSDNALTFQDLGI 304
N D + + L DLG+
Sbjct: 354 N----DVLTGERTLA--DLGV 368
>gi|42520933|ref|NP_966848.1| NADH-ubiquinone oxidoreductase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|99036018|ref|ZP_01315057.1| hypothetical protein Wendoof_01000095 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|42410674|gb|AAS14782.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 316
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 161/316 (50%), Gaps = 12/316 (3%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG TGF+G+++V++LA G + + F ++ LKL G+LGQI K + D+ ++
Sbjct: 7 IFGGTGFIGKHIVRRLAAEGYLIKI-FTRNQEKAACLKLCGNLGQISIFKGDFFDEKSVL 65
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
M + +V INL+G YE + + F V+ +AERIA AK M I S +G +S
Sbjct: 66 DGMEECDVAINLVGILYEAKKHDFYAVHVKIAERIAKAAKMKNVPM-MIHFSAMGIENSK 124
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S+ +K E+AV A I+RP+ + G ED NK+A+ F PL G+G+T+
Sbjct: 125 LSKYAKSKLEGEKAVTSAFQKAIIIRPSLVFGKEDNFFNKFARLATILPFLPLIGNGTTK 184
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
QP+ V D+A V + + KIY +GGP +++ L + + + + V F
Sbjct: 185 FQPICVTDLAEVVYRIISFNKQD-KKIYNMGGPKVYSFKSLLKFILNVTNRKCLLINVSF 243
Query: 252 PVAKAVAMPRE-----ILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
P+AK +A E +LLK P + D++ + +I + ++ + + + P
Sbjct: 244 PMAKLIAFFLENKIISMLLK--PITGDTNPMLTQDQVKVMMNSSI--EKSVDLETMKVRP 299
Query: 307 HKLKGYPTEYLIWYRK 322
++ EYL YRK
Sbjct: 300 LAIENVVPEYLKIYRK 315
>gi|240137849|ref|YP_002962321.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Methylobacterium extorquens AM1]
gi|418063724|ref|ZP_12701357.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
DSM 13060]
gi|240007818|gb|ACS39044.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Methylobacterium extorquens AM1]
gi|373557192|gb|EHP83660.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
DSM 13060]
Length = 389
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 159/320 (49%), Gaps = 9/320 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LAK G ++ V R D L+ +G +GQIV ++ N R +
Sbjct: 18 LVTVFGGSGFLGRHVVRALAKRGYRIRVAVR-RPDLALFLQPLGKVGQIVGVQANLRYPD 76
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I+ + +++VINL+G E+ + F + A IA A + + +S LGA
Sbjct: 77 SIRRAVEHSDIVINLVGILQESGSQRFSKLQTEGAGEIARAAAAV--GAKLVHVSALGAD 134
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SPS +KA E VLR P A I RP+ + G D N++A PL G
Sbjct: 135 PDSPSLYARSKALGEAEVLRASPDAVIFRPSLVFGPGDGFFNRFASLATFLPALPLAG-A 193
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPV+V DVA A+ A+ D G++YELGGP++ T+ M + +
Sbjct: 194 QTRFQPVFVGDVAEAIARAV-DGLAPGGRVYELGGPEVNTLEYFVRYMLEVTMRRRAVLD 252
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGI 304
+P PVA+ A EI LP D++ D +VSD A T + LGI
Sbjct: 253 LPEPVARLQARVIEIADTLTLGLLPANLKLTRDQVALLQVDNVVSDAAKAEGRTIEALGI 312
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
VP ++ YL +RK G
Sbjct: 313 VPTAVEAVVPGYLWRFRKAG 332
>gi|218659771|ref|ZP_03515701.1| probable NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein
[Rhizobium etli IE4771]
Length = 304
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 151/306 (49%), Gaps = 15/306 (4%)
Query: 23 VVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82
+V+ LAK G ++ V R D L+ +G++GQI ++ N R N+I + A+ V+N
Sbjct: 1 MVRALAKRGYRIRVAVR-RPDLAGFLQPLGNVGQISFVQANLRYRNSIDRAVEGASHVVN 59
Query: 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAA 142
+G +ET +F+ V F A +A A+ G + IS +GA+++S S TK A
Sbjct: 60 CVGILHETGRNTFDAVQEFGARAVAEAARNAGASL--AHISAIGANANSDSDYGRTKGRA 117
Query: 143 EEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202
E A+L P A I RP+ + G ED NK+A + PL G G T+ QPVYV DVA
Sbjct: 118 ETAILSIKPDAVIFRPSIVFGPEDSFFNKFADMARMSPVLPLIGGGKTKFQPVYVEDVAE 177
Query: 203 AVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPRE 262
AV A+ D GK+YELGGP++ + E E M ++ +PF +A +
Sbjct: 178 AVARAV-DGKVPSGKVYELGGPEVLSFRECLETMLKVTSRKNPFISLPFGIASMIGS--- 233
Query: 263 ILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLGIVPHKLKGYPTEYLI 318
+ +PF P D++ D +VS A T + LGI P + YL+
Sbjct: 234 -IASLIPFVTPP---ITPDQVRLLKRDNVVSAEAEAEGRTLKGLGIAPTMVASVLESYLV 289
Query: 319 WYRKGG 324
YR G
Sbjct: 290 QYRPHG 295
>gi|145522776|ref|XP_001447232.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414732|emb|CAK79835.1| unnamed protein product [Paramecium tetraurelia]
Length = 350
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 154/307 (50%), Gaps = 18/307 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGDLGQ-IVPMK 61
SGI AT+ G T F G Y+ L +GS+++ P ED R LK GQ +
Sbjct: 29 SGIRATIHGGTSFSGIYMGGMLGNIGSELIFPHNHQYNYEDHVRELKTTSGPGQNWLLHD 88
Query: 62 FNPRDDNTIKATMAKANVVINLIG-REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
N + I+ TM +NVV+NL+G R++ FE +N + +RIA ++ G++R I
Sbjct: 89 MNYDNKEMIEWTMKNSNVVVNLLGPRKHLKNRKDFEWINITVPKRIAEACAKNPGVIRLI 148
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
S GA+ + S TK E+ VL P ATI RP+ M+G D W + F+
Sbjct: 149 HFSACGANPHAESLDLQTKYIGEQEVLNAFPNATIFRPSVMVGDNDDFAYHWQVQKRYFH 208
Query: 181 FFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
F + D + QP++V DVA A+ ALK T +G+ YELGGP ++T+ E E+ ++
Sbjct: 209 NFNIVPDNCQAKRQPIFVQDVAQAMLNALKMPET-IGQTYELGGPHVYTLLECYEMFHNI 267
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299
++ P K + +++LLK + +P FN+D I + D IV + T
Sbjct: 268 VQRPP----------KLAHIDKQLLLKIAQY-IPNWKYFNIDYILKHGDDMIVQQGSKTI 316
Query: 300 QDLGIVP 306
DL + P
Sbjct: 317 DDLCVRP 323
>gi|148251841|ref|YP_001236426.1| hypothetical protein BBta_0224 [Bradyrhizobium sp. BTAi1]
gi|146404014|gb|ABQ32520.1| hypothetical protein BBta_0224 [Bradyrhizobium sp. BTAi1]
Length = 322
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 165/321 (51%), Gaps = 18/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV+ LAK ++ V R E HL+ +G +GQI ++ N R
Sbjct: 8 LVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPEL-AGHLQPLGRVGQIHTVQANLRYPE 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAE-RIAGIAKEHGGIMRFIQISCLGA 127
++ A + ++V INL+G E+ +FE V AE R + +S +GA
Sbjct: 67 SVAAALRDSHVAINLVGILTESGAQTFEAVQ---AEGAANVAKAAAAAGARLVHVSAIGA 123
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ S + KAA E A L +P A IMRP+ + G ED+ N++A + F PL G
Sbjct: 124 DAESTASYARAKAAGEAAALAAVPEAVIMRPSVVFGPEDQFTNRFAGLARISPFLPLIGG 183
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G T++QPVYV DVA AV A+ D G YELGGP++ + E+ +++ D +
Sbjct: 184 GETKMQPVYVGDVATAVADAV-DGKAQAGATYELGGPEVLSFREILKIILDITDRDRALL 242
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +A+ A LL+ P PL D++ SD +VS+ A LT Q LG
Sbjct: 243 PLPFGLARLQAA----LLQFAPGPLK----LTPDQVELLRSDNVVSETAKAAGLTLQGLG 294
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P L+ +YL +R G
Sbjct: 295 ITPDSLEAIGPQYLWRFRPAG 315
>gi|420242322|ref|ZP_14746383.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
CF080]
gi|398067977|gb|EJL59441.1| putative nucleoside-diphosphate sugar epimerase [Rhizobium sp.
CF080]
Length = 326
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 157/321 (48%), Gaps = 17/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V V R D L G +GQ+ ++ N R
Sbjct: 9 LVTVFGGSGFVGRHVVRALVKRGYRVRVAVR-RPDLAGFLLPAGYVGQVSLIQANLRYRQ 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ V+N +G +E+ +F+ V F A + A+ + IS +GA
Sbjct: 68 SVLRAVEGASHVVNCVGILFESGRNTFDAVQDFGARAVVDAARAA--GAKLTHISAIGAD 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S S +K AE +L LP A I+RP+ + G ED NK+A + F PL G G
Sbjct: 126 ANSESSYAQSKGRAEATILSTLPDAIILRPSIVFGPEDSFFNKFASMARTFPALPLIGGG 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T+ QPVYV DVA V ++ DGT + GKIYELGG ++ T + E + V
Sbjct: 186 KTKFQPVYVEDVAETVARSV--DGTIASGKIYELGGGEVMTFRQCLETVLRVTNRSNALV 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+PF +A + + +PF P D++ D +VSD A T Q +G
Sbjct: 244 SLPFGIASLIGS----IASLIPFVQPP---ITSDQVKLLKVDNVVSDAAAAEGRTLQGIG 296
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P YL+ YR G
Sbjct: 297 IRPTLASSILPSYLVQYRPQG 317
>gi|226468254|emb|CAX69804.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Schistosoma
japonicum]
Length = 266
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 13/203 (6%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++G++ TVFG TG+LGR ++ LAK G+Q++VP+R R +K++GDLGQI+ + +N
Sbjct: 51 FNGMVVTVFGATGYLGRVLMTHLAKTGTQIIVPYRCDPHMIRGMKVVGDLGQILFLPYNL 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+DD ++ M ++VVINLIG E++TRN++ E+V+ A RIA I+KE G+ + + +S
Sbjct: 111 KDDECLRKAMKYSDVVINLIGTEFDTRNFTIEEVHIDAACRIAKISKEI-GVEQLVHVSA 169
Query: 125 LGASSS------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKK 178
L + + PSR +KA EE VLRE P ATI RPA + G DR L +A ++
Sbjct: 170 LCQNKNPQKYVRKPSRFMISKAIGEEEVLRERPDATIFRPAEIWGPLDRFLCYFASKPRR 229
Query: 179 FN-----FFPLFGDGSTRI-QPV 195
N F PL+ G I QPV
Sbjct: 230 HNGIQTVFVPLWSYGEHTIKQPV 252
>gi|390168241|ref|ZP_10220205.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
indicum B90A]
gi|389589121|gb|EIM67152.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
indicum B90A]
Length = 312
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 157/324 (48%), Gaps = 20/324 (6%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
M V + TVFG GFLGR V Q L G++V V R R +K +G LGQ +
Sbjct: 1 MGRVMKDSLVTVFGGGGFLGRQVAQALMARGARVRVAQRDLATALR-VKPLGALGQTQFV 59
Query: 61 KFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+ R ++ + +++VINL+G + FE +H A G+ +
Sbjct: 60 AADIRKPESVARAIVGSDIVINLVG----VLSGDFEG-SHHDGAANVAKAAAAAGVRALV 114
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
IS +GA + SPS +KAA EEAV P ATI+RP+ + G ED+ LN++A+ ++
Sbjct: 115 HISAIGADAQSPSAYGRSKAAGEEAVKAAFPTATIIRPSIVFGPEDQFLNRFAEIIRLAP 174
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
P+ G +TR QPVYV DVA A+ A ++ G GK YELGGP +++ EL + I
Sbjct: 175 VVPVIG-ANTRFQPVYVADVAQAIANAAENPGLHGGKTYELGGPQTYSMLELNAWIAKAI 233
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
VP +A +A+ LP G D++ D + + A
Sbjct: 234 GRERSLCPVPASIASLIAL------------LPG-GPITRDQLAMLGRDNVAAPGAKGLA 280
Query: 301 DLGIVPHKLKGYPTEYLIWYRKGG 324
DLG+ P + ++L+ YRK G
Sbjct: 281 DLGVAPTPMPAVAEKWLVRYRKHG 304
>gi|83591356|ref|YP_425108.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Rhodospirillum
rubrum ATCC 11170]
gi|386348037|ref|YP_006046285.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Rhodospirillum
rubrum F11]
gi|83574270|gb|ABC20821.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Rhodospirillum
rubrum ATCC 11170]
gi|346716473|gb|AEO46488.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Rhodospirillum
rubrum F11]
Length = 340
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 159/334 (47%), Gaps = 30/334 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G + TVFG +G +GR +V LA G++V V R E LK +G LGQI P+ +
Sbjct: 2 TGRVVTVFGGSGSIGRQLVALLADQGARVRVAVRDTEK-AHFLKPLGQLGQIAPISASVS 60
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++K + A+ V+NL+G E+ +F+ V+ A +A + E G+ I +S L
Sbjct: 61 DAASVKRAVEGADQVVNLVGILAESGRRTFQAVHVDGAATVARASAE-AGVDALIHMSAL 119
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA +S + TKA E+AV P ATI+RP+ + G +D N +A + P F
Sbjct: 120 GADEASDANYSKTKALGEKAVREAFPAATILRPSVVFGPDDGFFNLFAGLQRLSPVLPYF 179
Query: 186 ------------------GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIF 227
G G + QPVYV DVA A+ A L D GK YELGGP ++
Sbjct: 180 TRDGFRRGGSGVCGIDLAGSGGPKFQPVYVGDVARAMIAIL-DTPALRGKTYELGGPRVY 238
Query: 228 TVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT 287
++ E+ +L+ R V +PF VA+ LL+K+P P D++
Sbjct: 239 SMKEIMDLVVAVTRRRTLVVPLPFWVARLQGR----LLEKLPNP-----PLTSDQVRLME 289
Query: 288 SDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYR 321
D + S DLGI P + YL +R
Sbjct: 290 VDNVCSGALPGLGDLGIEPEAAEAILPTYLSRFR 323
>gi|254467435|ref|ZP_05080845.1| NAD-dependent epimerase/dehydratase [Rhodobacterales bacterium Y4I]
gi|206684436|gb|EDZ44919.1| NAD-dependent epimerase/dehydratase [Rhodobacterales bacterium Y4I]
Length = 300
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 143/297 (48%), Gaps = 13/297 (4%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGFLG+ VV++L G V R E + ++V M D +T+
Sbjct: 10 VLGGTGFLGQRVVRRLQDRGCPVSAGTRFPEAAASYRSSWDRGVRLVGMDLA--DLDTLA 67
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+ A+ V+N IG ETR SF+DV+ A RIA +A++ GG+ R + IS +GAS S
Sbjct: 68 RALEGASAVVNCIGFYAETRQQSFQDVHAEGARRIARLARD-GGVQRLVHISGIGASLQS 126
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
PS +A E AV P A I+RP+ M + V + PLFG+G TR
Sbjct: 127 PSAYVRARAEGEAAVRSVFPGAVILRPSVMFSRSGAFFGDLQKIVDRLPVIPLFGNGRTR 186
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
+QPV+ DVA AV L D + K++ELGGPD+FT ++ + V VPF
Sbjct: 187 LQPVWAGDVAEAVCRLL-DGARAPRKVFELGGPDVFTYRQILRRLAVRSGRRRLLVPVPF 245
Query: 252 PVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+ +A A+P + LP P + +I D V + F DLGI P
Sbjct: 246 ALWRAGAVPLSL--------LPHPPVTRA-QIALMEHDNTVGEGTAGFADLGITPQS 293
>gi|386399406|ref|ZP_10084184.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
WSM1253]
gi|385740032|gb|EIG60228.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
WSM1253]
Length = 321
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 160/322 (49%), Gaps = 21/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR VV+ L + ++ V R E +L+ G +GQ+ ++ N R
Sbjct: 8 LVTVFGGSGFLGRNVVRALCRRDYRIRVAVRRPEL-AGYLQPSGKVGQVHTVQANVRYPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I+A + ++VVINL+G E SF+ V I +S +GA
Sbjct: 67 SIEAALRDSHVVINLVGILAEGGAQSFDAVQ--AKGAETVAKAAAAAGADLIHVSAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ SPSR KAA E AVL +P ATI RP+ M G ED+ N++A + PL G G
Sbjct: 125 AESPSRYARAKAAGEAAVLAAVPSATIFRPSVMFGPEDQFTNRFAALARMLPVVPLIG-G 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR+QPVYV DVA AV A+ D G YELGGP++ T+ E+ E + + +
Sbjct: 184 ETRMQPVYVGDVATAVADAV-DGKAKAGATYELGGPEVLTMREIIEAILEIADRKRMLMP 242
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDL 302
+PF +A+ K F PG L D++ D +VSD A LT + L
Sbjct: 243 LPFGLARF----------KANFLQFAPGALKLTPDQVTLLARDNVVSDAAKAAGLTLEGL 292
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P L+ +YL +R G
Sbjct: 293 GITPDSLEAIAPQYLWRFRAAG 314
>gi|154245635|ref|YP_001416593.1| NADH dehydrogenase (ubiquinone) [Xanthobacter autotrophicus Py2]
gi|154159720|gb|ABS66936.1| NADH dehydrogenase (ubiquinone) [Xanthobacter autotrophicus Py2]
Length = 328
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 160/324 (49%), Gaps = 19/324 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
S + TVFG +GFLGR+VV+ LA G +V V R E L+ +G +GQI + N R
Sbjct: 12 SDSLVTVFGGSGFLGRHVVRALAMRGYRVRVAVRRPEL-AGFLQPLGFVGQIQVSQANVR 70
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ + A V+NL+G ++ SF+ V+ F A IA G + + +S +
Sbjct: 71 YPESVARAVDGAEAVVNLVGVLSQSGRQSFDAVHAFGARAIAQATAREGAPL--VHVSAI 128
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA ++SPS TKA E AV A I RP+ + G ED N++A + PL
Sbjct: 129 GADANSPSGYGRTKAEGEAAVRAAAADAIIFRPSLLFGPEDDFFNRFAAMARLSPVLPLI 188
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G+TR QPV+V DVAAA+ A+ D G YELGGP + T EL EL+ I
Sbjct: 189 GGGTTRFQPVFVGDVAAAILKAV-DGKAKAGTTYELGGPQVRTFRELMELVLREIGHKRL 247
Query: 246 YVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQ 300
V +PF +A +A L + P PL D++ SD +VSD A TF
Sbjct: 248 LVDLPFGMANLMAR----LTQWAPGAPL------TTDQVAMLRSDNVVSDAAKAEGRTFA 297
Query: 301 DLGIVPHKLKGYPTEYLIWYRKGG 324
L I P L YL +RK G
Sbjct: 298 GLDITPTALATVLPTYLWRFRKAG 321
>gi|295664687|ref|XP_002792895.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Paracoccidioides sp.
'lutzii' Pb01]
gi|226278416|gb|EEH33982.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Paracoccidioides sp.
'lutzii' Pb01]
Length = 293
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 148/278 (53%), Gaps = 14/278 (5%)
Query: 46 RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAER 105
RHLK+ GDLG++V M+++ R+ +I+ ++ ++VV NL+GR+Y T+N+S+EDV+ ER
Sbjct: 4 RHLKVTGDLGRVVFMEYDLRNTQSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHIDGLER 63
Query: 106 IAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTE 165
IA ++ + RFI +S A +SPS F TKA E+ P TI+RPA M G E
Sbjct: 64 IAEATAKY-DVDRFIHVSSYNADPNSPSEFFRTKARGEQLARSIFPETTIVRPAPMFGFE 122
Query: 166 DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225
D LL+K A F + R PV+V+DV A+ + D S+G+ YEL GP
Sbjct: 123 DNLLHKLASITNLFTSNHM----QERYWPVHVIDVGHALEKMMFTDA-SVGQTYELYGPK 177
Query: 226 IFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINA 285
++ E+AEL+ I + ++ VP + K A LL +P + DE+
Sbjct: 178 NYSTAEIAELVDREIIKKRRHLNVPKRIMKPAAYWANRLLW---WP-----AISADEVEM 229
Query: 286 YTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKG 323
D + +A TF+DL I P ++ YL YR
Sbjct: 230 EFLDQQIDPSAKTFKDLDIEPAEISNLTFHYLQGYRSS 267
>gi|330813575|ref|YP_004357814.1| NADH-ubiquinone oxidoreductase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486670|gb|AEA81075.1| NADH-ubiquinone oxidoreductase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 316
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 158/314 (50%), Gaps = 14/314 (4%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG TGF+G +VQ L+K ++ + R ++LK+ GD+ QI + N + +I+
Sbjct: 12 IFGGTGFIGEEIVQHLSKNSYRIKIATRNTYL-AQNLKVFGDIAQIELHQVNLKSKESIE 70
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+ +V +NL+G +ETR+ F++++ + +A I + + S LG +S+S
Sbjct: 71 KFLEGCDVCVNLVGILFETRSQKFKELHTNFPKMLATIFSKSSSSNLLVHFSALGVNSNS 130
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S +K EE V +TI+RP+ +IG +D+ N +A+ F PL G +
Sbjct: 131 NSSYIKSKFLGEEEVKSNFLNSTIIRPSIVIGAKDKFFNMFAKLAGLFPLIPLVG-SEVK 189
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
QPVYV DVA A+ + ++ + K YEL G +I+T EL EL+ IR+ + +PF
Sbjct: 190 FQPVYVGDVAKAIDKIITNNISK--KTYELAGKNIYTFKELIELLLKEIRKKRIILPIPF 247
Query: 252 PVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS-DTIVSDNALTFQDLGIVPHKLK 310
+ AM ++ +P+P L LD+I D I+S T +DL I ++
Sbjct: 248 FAGRIQAMLFQL--------MPKP-LLTLDQIKILEEGDNILSGKNKTLKDLNIEAKSIE 298
Query: 311 GYPTEYLIWYRKGG 324
YL YR G
Sbjct: 299 TILPTYLKVYRPAG 312
>gi|115389976|ref|XP_001212493.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor [Aspergillus terreus NIH2624]
gi|114194889|gb|EAU36589.1| NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial
precursor [Aspergillus terreus NIH2624]
Length = 293
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 149/279 (53%), Gaps = 14/279 (5%)
Query: 46 RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAER 105
RHLK GDLG++ ++++ R+ +I+ ++ ++VV NL+GR+Y T+N+S+ DV+ ER
Sbjct: 4 RHLKPTGDLGRVNFIEYDLRNTQSIEESVRHSDVVYNLVGRQYPTKNFSYTDVHVDGIER 63
Query: 106 IAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTE 165
I ++ + R+I +S A+ SPS F+TK EE P TI+RPA M G E
Sbjct: 64 IVEAVAKY-DVDRYIHVSSYNANRDSPSEYFATKGWGEEVARSIYPETTIVRPAPMFGFE 122
Query: 166 DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225
D LL+K A+ F + R PV+V DV AA+ L DD T+ G+ +EL GP
Sbjct: 123 DNLLHKLAKVTNLFTANHM----QERYWPVHVNDVGAALERMLHDD-TTAGETFELYGPK 177
Query: 226 IFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINA 285
++ E+AEL+ I ++ ++ +P KA+ P L K L P + + DE+
Sbjct: 178 NYSTAEIAELVDKEIIKHRRHINLP----KAIFKPLAYYLNKF---LWWPTV-SADEVER 229
Query: 286 YTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
D ++ A TF+DLGI P L YL YR
Sbjct: 230 EFMDQVIDPTAKTFKDLGIEPTDLATLTFHYLKGYRSSS 268
>gi|431806489|ref|YP_007233390.1| NAD-dependent epimerase/dehydratase [Liberibacter crescens BT-1]
gi|430800464|gb|AGA65135.1| NAD-dependent epimerase/dehydratase [Liberibacter crescens BT-1]
Length = 325
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 161/323 (49%), Gaps = 21/323 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR---HLKLMGDLGQIVPMKFNPR 65
+ T+FG +GF+GR +VQ LA G ++ V R P LK + +GQ+ ++ N
Sbjct: 9 LVTIFGGSGFIGRRIVQSLAHRGYRIKVVVR----KPHLAVFLKPLCRVGQLSIVQGNVC 64
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+N+++ + ++ VIN +G +ET + SF V A IA A G + IS +
Sbjct: 65 HENSVRQAIKGSSHVINCVGLLFETSSNSFISVQEHGAHTIAKAAASFG--VPLTHISAI 122
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA ++S S+ +K E +L I+RP+ + G+ED+ NK+A + F PL
Sbjct: 123 GADANSESKYARSKGRGENLILSANSNTIIIRPSIVFGSEDKFFNKFANMTRFLPFIPLI 182
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+G T++QPVYV DVA + +++ + G IYE+GGP+I T E E ++ I
Sbjct: 183 DNGRTKLQPVYVGDVAEVIASSVIGK-LNPGTIYEIGGPEILTFRECMEKIFKVIGRKKP 241
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQD 301
++ + F + ++ ++ +P RP L D++ D IVS+ A T
Sbjct: 242 FLSLSFRSSALIST----MMSLIPI---RPPLITNDQVKLLKRDNIVSEIAELEKRTLIG 294
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
+G+ P L YL+ YR G
Sbjct: 295 IGLTPTLLSSVLPSYLLRYRYQG 317
>gi|85709521|ref|ZP_01040586.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Erythrobacter sp. NAP1]
gi|85688231|gb|EAQ28235.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Erythrobacter sp. NAP1]
Length = 334
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 167/327 (51%), Gaps = 28/327 (8%)
Query: 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMK 61
T S + TVFG +G+LG YV Q L G++V + R E LK + +LGQ+
Sbjct: 4 TSSLSDALVTVFGGSGYLGNYVAQALLARGARVRIASRNPEK-AFPLKPLANLGQLQFAH 62
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAE---RIAGIAKEHGGIMR 118
+ + ++KA++ A V+NL+G ++S ++ M E R+A IA E+G
Sbjct: 63 CDITKEESLKASLHGATHVVNLVG------DFS-GNLEELMGEAPGRMAAIASENGA-KA 114
Query: 119 FIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKK 178
F+ +S +GA +SS + KA EE VL P AT++RP+ + G +D LN + ++
Sbjct: 115 FVHVSAIGADASSSTGYARGKALGEERVLAAFPQATVLRPSIIFGKDDNFLNMFGGMIEM 174
Query: 179 FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD 238
P+FG ++Q V+V DVA AV L+D G G+ +ELGGP+ T+ E+ E +
Sbjct: 175 LPVLPVFGP-DAKMQLVFVDDVAEAVAFCLEDPGAHGGETFELGGPEQLTMMEINERIAA 233
Query: 239 TIREYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNAL 297
++ A++ L +P P+ R D+ + +V+D+AL
Sbjct: 234 AQGRDRRFI--------AMSDSMSGLFAALPGTPMSR------DQWTLLKAGNVVADDAL 279
Query: 298 TFQDLGIVPHKLKGYPTEYLIWYRKGG 324
TF DLGI P L + ++++ YRK G
Sbjct: 280 TFADLGITPKPLGLFLDKWMVRYRKFG 306
>gi|329888579|ref|ZP_08267177.1| NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9
[Brevundimonas diminuta ATCC 11568]
gi|328847135|gb|EGF96697.1| NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9
[Brevundimonas diminuta ATCC 11568]
Length = 334
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 154/316 (48%), Gaps = 8/316 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+G VV+ LA+ G +V V R + P L + GD+GQ+ ++ + D
Sbjct: 19 LVTVFGGSGFIGTQVVRALARRGWRVRVAARNAKSAP-VLHMAGDVGQVQVVRCDITDKA 77
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ + A+ VINL+G +ET F+ + H A G R IS LGA
Sbjct: 78 AVAEAVRGADAVINLVGILFETGGRKFQTL-HVEGATNVAEAARAAGAKRLTHISALGAD 136
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ + TK AE AV P A I+RP+ + G+ D+ LN++A PL G G
Sbjct: 137 ANGKADYARTKGEAEAAVRAAFPGAVIVRPSIVFGSGDQFLNRFAAMATWSPVLPLIGGG 196
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QPVYV D A A+ A + G+ YELGGP ++T ++ + + +
Sbjct: 197 QTKFQPVYVADAAEAIARATVAA-EAAGETYELGGPSVWTFEDILKFILRETNRRNILLP 255
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+PFPVA+ + L ++P + D++ SD +V+ A DLG+ P
Sbjct: 256 LPFPVARLIGS-----LAQIPAVIGLTPALTKDQVVLLESDNVVTPGAKGLADLGVEPSG 310
Query: 309 LKGYPTEYLIWYRKGG 324
L+ YL YR GG
Sbjct: 311 LEAIAPSYLWRYRDGG 326
>gi|118378329|ref|XP_001022340.1| hypothetical protein TTHERM_00557760 [Tetrahymena thermophila]
gi|89304107|gb|EAS02095.1| hypothetical protein TTHERM_00557760 [Tetrahymena thermophila
SB210]
Length = 398
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 147/307 (47%), Gaps = 18/307 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGDLGQIVPMK- 61
SGI AT+FG TGF+G Y+ L +GS V+ P +D + LKL GQ M+
Sbjct: 77 SGIRATIFGATGFMGPYIGAALGYIGSDVIFPHNHVYAYDDYVKELKLCAGSGQSYIMRH 136
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFED-VNHFMAERIAGIAKEHGGIMRFI 120
FN DDN + +NVVINL+G + +N+ N +A++IA + + R I
Sbjct: 137 FNYDDDNMYDMAIKNSNVVINLVGSRLQNKNFQKAAYANIHVAKKIAEACARNPNVRRLI 196
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
S GA + SPS TK EEAVL P ATI RP + G +D + W + +
Sbjct: 197 HFSAAGADTKSPSPDLHTKFHGEEAVLNAFPNATIFRPCTVYGMQDYFIRHWIKERDWWY 256
Query: 181 FFPLFGDGST-RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
F + D T + QP+ + DVA V ALK S G+IYELGGP +++ E+ E++ +
Sbjct: 257 HFNIVTDDCTAKRQPILINDVAQCVLNALKLQ-ESAGQIYELGGPHVYSRLEVFEMLANL 315
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299
P +P +A K+ FN++++ D IV+ T
Sbjct: 316 SGRPPKLAHIPHDIA-----------LKITQNFYNWEFFNMEKVIKDKLDLIVTGKHKTI 364
Query: 300 QDLGIVP 306
DL + P
Sbjct: 365 SDLYVQP 371
>gi|167041252|gb|ABZ06008.1| putative 3-beta hydroxysteroid dehydrogenase/isomerase family
protein [uncultured marine microorganism HF4000_005D21]
gi|167045756|gb|ABZ10402.1| putative NAD dependent epimerase/dehydratase family protein
[uncultured marine bacterium HF4000_APKG3108]
Length = 313
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 160/322 (49%), Gaps = 25/322 (7%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR---HLKLMGDLGQIVPMK---F 62
I +FG GFLG+++++QL K+ +V V R +P +LK +G+ GQI K F
Sbjct: 7 IIGIFGAGGFLGKHLMRQLTKLDYRVKVATR----NPYLKGYLKPLGNPGQIELFKTNIF 62
Query: 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
NP D +K + ++ INL+G YETR F ++ ++ + E G I + + +
Sbjct: 63 NPED---VKQVLKNCDLAINLVGILYETRKQKFNQIHAQFPNLLSELCNELG-IKKLVHV 118
Query: 123 SCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
S LG PS+ +K E+ + + I+RP M G ED+ N +A +
Sbjct: 119 SALGVKEGHPSQYMQSKLQGEKNIQDTFKQSVILRPGIMFGPEDKFFNTFATLAQFSPAL 178
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
PL G G T +P+YV DVA + +L+ + S IYELGG + ++ EL +++ I +
Sbjct: 179 PLIGGGKTVFEPIYVGDVAQTIVKSLELN-NSKSSIYELGGAN-YSFKELMQILLSEINK 236
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
+ +P+ +AK + L+ +P PL P D++ D +VS T ++L
Sbjct: 237 KRFLIPIPWGMAKF----QSYFLQMLPTPLLTP-----DQVTMLRYDNVVSGEYKTLKNL 287
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
I P ++ +Y+ +R GG
Sbjct: 288 KIQPTTIQSILPKYIYRFRSGG 309
>gi|353328625|ref|ZP_08970952.1| NADH-ubiquinone oxidoreductase, putative, partial [Wolbachia
endosymbiont wVitB of Nasonia vitripennis]
Length = 320
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 159/317 (50%), Gaps = 12/317 (3%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+FG TGF+G+++V++LA G + + R ++ LKL G+LGQI ++ + ++ +I
Sbjct: 10 VIFGGTGFIGKHIVRRLAAAGYLIRIFTRD-QEKAACLKLCGNLGQISILEGDFFNEKSI 68
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+M +VVINL+G YE R Y F V+ +AERIA A + + I S +G +
Sbjct: 69 LESMEGCDVVINLVGILYEKRKYDFYTVHVGIAERIAK-AAQIKNVSMMIHFSAMGIEND 127
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S+ +K E+AV A I++P+ + G ED NK+A+ F PL G G T
Sbjct: 128 KLSKYAQSKLKGEKAVASAFQGAMIIKPSLVFGKEDNFFNKFARLATILPFLPLIGSGIT 187
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
+ QP+ V ++A V + + KIY +GG +++ L + + + + VP
Sbjct: 188 KFQPICVTNLAEVVYRIISFNKQD-KKIYNIGGSKVYSFKSLLKFILNVTNRKCLLINVP 246
Query: 251 FPVAKAVAMPRE-----ILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
FP+A+ +A E +LLK P + D++ S +I + L + + I
Sbjct: 247 FPMARLIAFFLESKVVSVLLK--PITGDASPILTRDQVKVMMSSSIEKSDDL--ETMKIR 302
Query: 306 PHKLKGYPTEYLIWYRK 322
P ++ EYL YRK
Sbjct: 303 PLAIENVVPEYLKIYRK 319
>gi|452963630|gb|EME68692.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Magnetospirillum sp.
SO-1]
Length = 335
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 155/339 (45%), Gaps = 37/339 (10%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMKFNPR 65
+ TVFG +GF+GR VV++LA G V R DP LK MGD+GQ+ P++ +
Sbjct: 5 VVTVFGGSGFIGRNVVKRLAAQGWVV----RAAVRDPIAAEFLKPMGDVGQVTPLRADIT 60
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D + +A + V+NL+G YE+ +F D H A + G+ R + +S L
Sbjct: 61 DPKAVAMAVAGVDAVVNLVGILYESGRATF-DAIHVKGAATVAAAAKAAGVGRLVHMSAL 119
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP-- 183
GA +S + +KAA EEAVL P A ++RP+ + G +D N++ + P
Sbjct: 120 GADKNSEAAYARSKAAGEEAVLAAFPGACVVRPSVVFGPDDDFFNRFGKLAMVSPVLPVF 179
Query: 184 -----------------LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDI 226
LFG G QPV V DVA A+ L DD GK +ELGGP
Sbjct: 180 TADGFKPVCGEAGCSIDLFGSGGPIFQPVSVADVAQAIVQML-DDSRHAGKTFELGGPRR 238
Query: 227 FTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAY 286
+++ E+ EL+ + V VPF + M + L+ +P P L D++
Sbjct: 239 YSMKEVMELVMSSTGRQRVLVPVPF----GLGMLQATFLQMLPSP-----LLTKDQVRMM 289
Query: 287 TSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGGP 325
D +V +LGI P + Y+ Y K P
Sbjct: 290 KVDNVVRGGKPGLTELGITPTSAEAILPLYMKRYGKYAP 328
>gi|256090820|ref|XP_002581379.1| NADH-ubiquinone oxidoreductase [Schistosoma mansoni]
gi|238667248|emb|CAZ37618.1| NADH-ubiquinone oxidoreductase 39 kD subunit,putative [Schistosoma
mansoni]
Length = 325
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 165/309 (53%), Gaps = 20/309 (6%)
Query: 26 QLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85
QLAK G+Q+++P+R R +K++GDLGQ++ + F+ +DD +++ M ++VVINL G
Sbjct: 3 QLAKTGTQIILPYRCDPHMIRDVKVIGDLGQVLFLPFDLKDDESLRKAMKYSDVVINLTG 62
Query: 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP------SRVFSTK 139
E +TRN++ E V+ A RIA I+KE G+ + + +S L + + P SR +K
Sbjct: 63 TESDTRNFTIEHVHIDAASRIARISKE-LGVQQLVHVSALCQNKNPPKYVRKHSRFMVSK 121
Query: 140 AAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN-----FFPLFGDGSTRI-Q 193
A EE VLRE P ATI RPA + G DR L +A ++F PL+ G + Q
Sbjct: 122 AIGEEEVLRERPDATIFRPAEIWGPHDRFLCYFASRPRRFTRLQSVHIPLWASGKNTVKQ 181
Query: 194 PVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPV 253
PV V D+A + +L + S+G+IYE GP + + ++ + +Y R P V + P+
Sbjct: 182 PVCVHDLACGIVNSLH-NPESLGQIYEAVGPHRYRLDDMVKWIYFLCRYLPSEVYIT-PM 239
Query: 254 AKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYP 313
+ + + R + +KV P + + ++ I+S T DL + KL+ +
Sbjct: 240 S-PLFLARTYIYEKVA---PVHSYLTFERLERESATDILSGYP-TLDDLNVKLRKLEDHI 294
Query: 314 TEYLIWYRK 322
+ +R+
Sbjct: 295 NHIVFLHRR 303
>gi|226293379|gb|EEH48799.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Paracoccidioides
brasiliensis Pb18]
Length = 293
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 147/278 (52%), Gaps = 14/278 (5%)
Query: 46 RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAER 105
RHLK+ GDLG++V M+++ R+ +I+ ++ ++VV NL+GR+Y T+N+S+EDV+ ER
Sbjct: 4 RHLKVTGDLGRVVFMEYDLRNTQSIEESVRHSDVVYNLVGRKYPTKNFSYEDVHIDGLER 63
Query: 106 IAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTE 165
IA ++ + RFI +S A +SPS F TKA E+ P TI+RPA M G E
Sbjct: 64 IAEATAKY-DVDRFIHVSSYNADPNSPSEFFRTKARGEQLARSIFPETTIVRPAPMFGFE 122
Query: 166 DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225
D LL+K A F + R PV+V+DV A+ + D S+ + YEL GP
Sbjct: 123 DNLLHKLASITNLFTSNHM----RERYWPVHVIDVGHALEKMMFTDA-SVAQTYELYGPK 177
Query: 226 IFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINA 285
++ E+AEL+ I + ++ VP + K A LL +P + DE+
Sbjct: 178 NYSTAEIAELVDREIIKKRRHINVPKRIMKPAAYWANRLLW---WP-----AISADEVEM 229
Query: 286 YTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKG 323
D + +A TF+DL I P ++ YL YR
Sbjct: 230 EFLDQQIDPSAKTFKDLDIEPAEISNLTFHYLQGYRSS 267
>gi|421595759|ref|ZP_16039732.1| oxidoreductase [Bradyrhizobium sp. CCGE-LA001]
gi|404272129|gb|EJZ35836.1| oxidoreductase [Bradyrhizobium sp. CCGE-LA001]
Length = 321
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 169/322 (52%), Gaps = 21/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR VV+ L K ++ V R E +L+ G +GQ+ ++ N R
Sbjct: 8 LVTVFGGSGFLGRNVVRALCKRDYRIRVAVRRPEL-AGYLQPSGKVGQVHTVQANLRYPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A + ++VVINL+G E+ +F+ V AE +A A I +S +GA
Sbjct: 67 SVAAALRDSHVVINLVGVLTESGAQTFDAVQARGAETVAKAAAAA--GAELIHVSAIGAD 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ SPS KAA E AV +P ATI RP+ M G ED+ N++A + PL G G
Sbjct: 125 AESPSSYAKAKAAGEAAVRAAVPSATIFRPSVMFGPEDQFTNRFAALARMSPVLPLIG-G 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR+QPVYV DVA A+ A+ T+ G YELGGP++ T+ E+ E TI E +
Sbjct: 184 DTRMQPVYVGDVATAIAEAVDGKATA-GATYELGGPEVLTMREIIE----TILEITDRER 238
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDL 302
+ P++ ++A + +L+ PG F L D++ D +VSD A LT + L
Sbjct: 239 MLVPLSFSLARFQAAVLQFA------PGAFKLTADQVTMLERDNVVSDAAKAASLTLEGL 292
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P L+ +YL +R G
Sbjct: 293 GITPDSLEAIAPQYLWRFRPQG 314
>gi|145521871|ref|XP_001446785.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414274|emb|CAK79388.1| unnamed protein product [Paramecium tetraurelia]
Length = 350
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 155/310 (50%), Gaps = 18/310 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGDLGQ-IVPMK 61
SGI AT+ G T F G Y+ L +GS+++ P ED R LK GQ +
Sbjct: 29 SGIRATIHGGTSFSGIYMGGMLGNIGSELIFPHNHQYNYEDHVRELKTTSGPGQNWLLHD 88
Query: 62 FNPRDDNTIKATMAKANVVINLIG-REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
N + I+ TM +NVV+NL+G R++ FE +N + +RIA ++ G++R I
Sbjct: 89 MNYDNKEMIEWTMKNSNVVVNLLGPRKHLKNRKDFEWINITVPKRIAEACAKNPGVIRLI 148
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
S GA+ + S TK E+ VL P ATI RP+ M+G D W + F+
Sbjct: 149 HFSACGANPHAQSLDLQTKYIGEQEVLNAFPNATIFRPSVMVGDNDDFAYHWQVQKRYFH 208
Query: 181 FFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
F + D + QP++V DVA A+ ALK T +G+ YELGGP ++T+ E E+ ++
Sbjct: 209 NFNIVPDNCQAKRQPIFVQDVAQAMLNALKMPET-IGQTYELGGPHVYTLLECYEMFHNI 267
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299
++ P K + +++LLK + +P FN+D I + D +V + T
Sbjct: 268 VQRPP----------KLAHVDKQLLLKIAQY-IPNWKYFNIDYILKHGDDMVVQAGSKTI 316
Query: 300 QDLGIVPHKL 309
+L + P L
Sbjct: 317 DELCVRPLSL 326
>gi|338737370|ref|YP_004674332.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [Hyphomicrobium
sp. MC1]
gi|337757933|emb|CCB63756.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
[Hyphomicrobium sp. MC1]
Length = 324
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 153/294 (52%), Gaps = 16/294 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G +ATVFG +GF+GR++V LA+ G +V R D +L+ MG +GQI P++ N R
Sbjct: 4 NGKLATVFGGSGFVGRHIVWSLARKGYRVRAAVR-RPDLAGYLQPMGVVGQIFPVQANLR 62
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+++ + A+VVIN +G T SF D H A + G R + IS +
Sbjct: 63 FADSVARAVEGADVVINAVGILAPTGAQSF-DAIHVEGAARIAKAAKAAGAERLVHISAI 121
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA +SP++ TKA EEA+ P A ++RP+ + G ED N++A + F PL
Sbjct: 122 GADKTSPAKYAQTKALGEEAMFAGFPGALVLRPSIVFGQEDEFFNRFAAMARVSPFLPLI 181
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G T+ QPV+V DV A AA + G YELGGP + T EL +L D
Sbjct: 182 GGGVTKFQPVFVGDVGHAAAAAATGA-GTPGTTYELGGPQVSTFKELLKLTLDYSDRKRL 240
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLP---RPGLFNLDEINAYTSDTIVSDNA 296
+ +PF +AK L+ + +PLP RP +D++ SD +VS+ A
Sbjct: 241 LLPLPFWMAK--------LMAALTWPLPNTLRP--MTVDQVRLLQSDNVVSEGA 284
>gi|222147276|ref|YP_002548233.1| NADH-ubiquinone oxidoreductase [Agrobacterium vitis S4]
gi|221734266|gb|ACM35229.1| NADH-ubiquinone oxidoreductase [Agrobacterium vitis S4]
Length = 325
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 163/328 (49%), Gaps = 16/328 (4%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
MT+ + TVFG +GF+GR+VV+ LA+ G +V V R D + G++GQI
Sbjct: 1 MTFANLPPLVTVFGGSGFVGRHVVRVLAQRGYRVRVAVR-RPDLAGFVLPFGNVGQISLS 59
Query: 61 KFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+ N R +++ + A+VV+N +G E+ F+ V F A +A A R +
Sbjct: 60 QANLRYRDSVAKAVEGASVVVNCVGILLESGRNKFDAVQDFGARAVAEAATAA--GARLV 117
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
IS +GA + S S ++K E+A+ + P A I+RP+ + G ED NK+A +
Sbjct: 118 HISAIGADAKSASSYAASKGRGEDAIRQVAPGAVILRPSIVFGPEDSFFNKFAAMARLSP 177
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
PL G G T+ QPV+V DVA AV A+ DG ++ELGGP++ T + E M I
Sbjct: 178 VLPLIGGGKTKFQPVFVEDVAEAVAKAV--DGKVAAGLFELGGPEVLTFRQCLEEMLRVI 235
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA---- 296
V +PF +A +A + PL P L N D++ SD +VS+ A
Sbjct: 236 DRTNPLVSLPFGIASLLASVASAI------PLITPPLTN-DQLTLLKSDNVVSEAAKKEG 288
Query: 297 LTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
T LGI P + YLI +R G
Sbjct: 289 RTLTALGITPTAVAAVLPSYLIHFRPHG 316
>gi|256090822|ref|XP_002581380.1| NADH-ubiquinone oxidoreductase [Schistosoma mansoni]
gi|238667249|emb|CAZ37619.1| NADH-ubiquinone oxidoreductase 39 kD subunit,putative [Schistosoma
mansoni]
Length = 244
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 135/236 (57%), Gaps = 14/236 (5%)
Query: 26 QLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85
QLAK G+Q+++P+R R +K++GDLGQ++ + F+ +DD +++ M ++VVINL G
Sbjct: 3 QLAKTGTQIILPYRCDPHMIRDVKVIGDLGQVLFLPFDLKDDESLRKAMKYSDVVINLTG 62
Query: 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP------SRVFSTK 139
E +TRN++ E V+ A RIA I+KE G+ + + +S L + + P SR +K
Sbjct: 63 TESDTRNFTIEHVHIDAASRIARISKE-LGVQQLVHVSALCQNKNPPKYVRKHSRFMVSK 121
Query: 140 AAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN-----FFPLFGDGSTRI-Q 193
A EE VLRE P ATI RPA + G DR L +A ++F PL+ G + Q
Sbjct: 122 AIGEEEVLRERPDATIFRPAEIWGPHDRFLCYFASRPRRFTRLQSVHIPLWASGKNTVKQ 181
Query: 194 PVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
PV V D+A + +L + S+G+IYE GP + + ++ + +Y R P V +
Sbjct: 182 PVCVHDLACGIVNSLH-NPESLGQIYEAVGPHRYRLDDMVKWIYFLCRYLPSEVYI 236
>gi|367475049|ref|ZP_09474525.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365272669|emb|CCD86993.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 322
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 164/321 (51%), Gaps = 18/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV+ LAK ++ V R E HL+ +G +GQI ++ N R +
Sbjct: 8 LVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPEL-AGHLQPLGRVGQIHTVQANLRYPD 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAE-RIAGIAKEHGGIMRFIQISCLGA 127
++ A + ++V INL+G E+ +F+ V AE R + +S +GA
Sbjct: 67 SVAAALRDSHVAINLVGILTESGAQTFDAVQ---AEGAATVAKAAAAAGARLVHVSAIGA 123
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ S S KAA E A L +P A IMRP+ + G ED+ N++A + F PL G
Sbjct: 124 DAESASSYARAKAAGEAAALAAVPEAVIMRPSVVFGPEDQFTNRFAGLARIAPFLPLVGG 183
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G T++QPVYV DVA AV A+ D G YELGGP++ + E+ +++ D +
Sbjct: 184 GETKMQPVYVGDVATAVADAV-DGKAQPGATYELGGPEVLSFREILKIVLDITDRDRMLL 242
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +AK A L+ P PL D++ D +VS+ A LT Q LG
Sbjct: 243 PLPFGLAKLQAA----FLQFAPGPLK----LTPDQVELLRHDNVVSEAAKAAGLTLQGLG 294
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P L+ +YL +R G
Sbjct: 295 ITPDSLEAVGPQYLWRFRPAG 315
>gi|296282062|ref|ZP_06860060.1| NADH ubiquinone oxidoreductase, putative [Citromicrobium
bathyomarinum JL354]
Length = 316
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 26/319 (8%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GR+V + L + ++V + R E+ LK + LGQ+ + + D+
Sbjct: 11 VVTIFGGSGFIGRHVAEDLLQQNARVRIAARHPEE-AFSLKPLAKLGQLQFARCDILDER 69
Query: 69 TIKATMAKANVVINLIGREYETRNYSFE-DVNHFMAERIAGIAK--EHGGIMRFIQISCL 125
+++A + ++ V+NL+G +FE D+ M E +A+ + G RF+Q+S +
Sbjct: 70 SVRACVEGSDAVVNLVG--------TFEGDLMKLMGEAAGNLARAAKDAGASRFVQVSAI 121
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA + PS KA EE V P ATI+RP+ + G + +LN +A + P+F
Sbjct: 122 GADRNGPSTYAQAKALGEELVRDAFPKATILRPSIIFGPDGGILNLFADLIASLPVLPVF 181
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
S +Q V+V DVAAA+T AL D GKIYEL GPD +T+ EL + + R
Sbjct: 182 APDSP-LQVVHVDDVAAAITKALLDPSEFGGKIYELAGPDKWTMMELNQRIAKAQRRKRT 240
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+V +P + A A L P D+ + + S+ F LGI
Sbjct: 241 FVPMPDSASAAFAA-----LPGTP--------MGTDQWRMLKAGSTASEGVPGFAALGIQ 287
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P L+ Y++ YRK G
Sbjct: 288 PRPLELVIDHYMVRYRKHG 306
>gi|254461807|ref|ZP_05075223.1| NADH-ubiquinone oxidoreductase [Rhodobacterales bacterium HTCC2083]
gi|206678396|gb|EDZ42883.1| NADH-ubiquinone oxidoreductase [Rhodobacteraceae bacterium
HTCC2083]
Length = 326
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 161/316 (50%), Gaps = 7/316 (2%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V V R ++ +K G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRVAVR-RPNEAMFVKPYGTVGQVEPILCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A + A+ V+N +G + F+ V GI +QIS +GA
Sbjct: 63 SVAAALQGADAVVNCVGILTQNGKNKFDAV-QAEGAGRVARVAAAAGIETMVQISAIGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ + S TKA E VL +P A I+RP+ M G ED+ N++A + P G
Sbjct: 122 ADANSDYARTKALGEANVLAHMPNAMILRPSIMFGAEDKFFNRFASMARMGPIVPAIG-A 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T+ QP YV DVAAA + G + G IYE+GGPD+ T EL + M I+ +
Sbjct: 181 ETKFQPAYVDDVAAAAVKGVL--GEAHG-IYEVGGPDVNTFRELLQTMLGVIQRRKLILN 237
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
VPFP+A+ +A + LL+ + L + D++ D + +D+A F +LGI P
Sbjct: 238 VPFPIARVMAWAFD-LLETITLGLVKNPAATRDQVKNLRLDNVAADDAKGFAELGITPTA 296
Query: 309 LKGYPTEYLIWYRKGG 324
++ YL +R G
Sbjct: 297 MEAVLPNYLWRFRPSG 312
>gi|365887649|ref|ZP_09426475.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365336721|emb|CCD99006.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 322
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 164/321 (51%), Gaps = 18/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR VV+ LAK ++ V R E HL+ +G +GQI ++ N R
Sbjct: 8 LVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPEL-AGHLQPLGRVGQIHTVQANLRYPE 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAE-RIAGIAKEHGGIMRFIQISCLGA 127
++ A + ++V INL+G E+ +F+ V AE R + +S +GA
Sbjct: 67 SVAAALRDSHVAINLVGILTESGAQTFDAVQ---AEGAATVAKAAAAAGARLVHVSAIGA 123
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ S S KAA E A L +P A IMRP+ + G ED+ N++A + F PL G
Sbjct: 124 DADSASSYARAKAAGEAASLAAVPEAVIMRPSVVFGPEDQFTNRFAGLARIAPFLPLVGG 183
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G T++QPVYV DVA AV A+ D G YELGGP++ + E+ +++ D I +
Sbjct: 184 GETKMQPVYVGDVATAVADAV-DGKAQAGATYELGGPEVLSFREILKIILDIIDRDRALL 242
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF +AK A L+ P PL D++ D +VS+ A LT Q LG
Sbjct: 243 PLPFGLAKFQAN----FLQFAPGPLK----LTPDQVELLRHDNVVSEAAKAAGLTLQGLG 294
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P L+ +YL +R G
Sbjct: 295 ITPDSLEAIGPQYLWRFRPAG 315
>gi|399910094|ref|ZP_10778408.1| NAD-dependent epimerase/dehydratase [Halomonas sp. KM-1]
Length = 313
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 152/305 (49%), Gaps = 26/305 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-----GDLGQIVPMKFNPR 65
TVFG TGFLG +V++L + G V + R H L GD + PM + R
Sbjct: 12 TVFGGTGFLGTRIVRELFEAGHSVRIAAR-------HPTLPDWAEPGD--PLEPMVTDVR 62
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ + + A+ V+N + E+ SF+D++ A R+A +A+ G+ FIQ+S +
Sbjct: 63 SEADVGRALEGASGVVNAVSLYVESAGLSFDDIHVEGAGRMARLARV-AGVKTFIQLSGI 121
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS S+ SR + E V+ E P A I+RP+ M G D + + A + PLF
Sbjct: 122 GASPSARSRYVGARGRGEAKVIEEYPKAVIVRPSVMFGAGDAFITRLAGLT-RLPVIPLF 180
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G TR+QPV+VVDVA A+ L + +++ELGGPD+ + L+ +
Sbjct: 181 GQGQTRLQPVHVVDVARAIARLLGANPPER-RLFELGGPDVLPYRDAVNLLQAQLERERP 239
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ +PFP+ A+ + PLP L D++ + D V ++ TF DLGIV
Sbjct: 240 LLAIPFPLWHMAAL--------LAAPLPGSPLTR-DQVFMMSEDNTVGEDVGTFADLGIV 290
Query: 306 PHKLK 310
P L+
Sbjct: 291 PRSLR 295
>gi|320582132|gb|EFW96350.1| putative mitochondrial Complex I, subunit [Ogataea parapolymorpha
DL-1]
Length = 387
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 165/322 (51%), Gaps = 25/322 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+G ATVFG TGFLGR +V +LAK G+ ++ PFR E R LK MGDLG + ++ + R
Sbjct: 39 TGFTATVFGGTGFLGRLLVAKLAKHGTILVCPFRN-EMAKRQLKPMGDLGVVNYIECDIR 97
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +++ ++ ++++V NLIG + T+N+S ED N RIA + + + R + +S
Sbjct: 98 NLRSLEESVCRSDIVFNLIGSDQNTKNFSMEDANVESIRRIAELCTAY-EVPRLVHVSSY 156
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A +S S+ F+TK +E A P TI+RP + G LN + PL
Sbjct: 157 NADPNSKSQFFATKGQSEIAAREAFPDVTIVRPGPLYGRNSTFLN---------DLLPLQ 207
Query: 186 GDGS-----TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
G G + + P + + VA A+ DD T+ GK+YEL G + ++ EL E M I
Sbjct: 208 GFGENIKYRSTVYPAHGLQVAGALEKIGFDDSTT-GKVYELHGNEPYSRAELRE-MLKYI 265
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN--AYTSDTI---VSDN 295
R Y FP A ++P ++ K L NL IN Y + + +
Sbjct: 266 RHLGMYGY--FPAAAGYSIPTPEIVYKAWCWLNEKLNSNLTAINYDYYVRSDMNHKLDPD 323
Query: 296 ALTFQDLGIVPHKLKGYPTEYL 317
ALTF+DL +VP +L + +Y+
Sbjct: 324 ALTFEDLDMVPDELADFLYKYV 345
>gi|170740480|ref|YP_001769135.1| NADH dehydrogenase (ubiquinone) [Methylobacterium sp. 4-46]
gi|168194754|gb|ACA16701.1| NADH dehydrogenase (ubiquinone) [Methylobacterium sp. 4-46]
Length = 381
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 163/321 (50%), Gaps = 11/321 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LAK G ++ V R D + L+ +G +GQIV ++ N RD
Sbjct: 14 LVTVFGGSGFLGRHVVRALAKRGYRIRVAVR-RPDLAQFLQPLGRVGQIVAVQANLRDPA 72
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+VV+NL+G E+ N F+ + IA A G M + +S +GA
Sbjct: 73 SVARAVEHADVVVNLVGILQESGNQRFQRLQAEGPGVIARAAAAIGARM--VHVSAIGAD 130
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ SPS +KAA E VL P A I+RP+ + G D N++A V PL G
Sbjct: 131 AGSPSAYARSKAAGEAGVLAARPDAVIVRPSIIFGHGDSFFNRFAALVGLLPVLPLAG-A 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
TR+QPV+V DVA + AL DG + G YELGGP+I T+ +L E +
Sbjct: 190 ETRMQPVFVGDVAEVI--ALAVDGKARPGTTYELGGPEILTLRQLVEYTLQVTMRRRLVL 247
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+P P A+ A E + LP D++ D +VS+ A +F+ G
Sbjct: 248 PIPAPAARLQAWALETVDALTLGLLPDSLKLTRDQVLLLARDNVVSEAAKAEGRSFEAFG 307
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
IVP ++ YL +RK G
Sbjct: 308 IVPTAIEAVVPGYLWRFRKAG 328
>gi|383640714|ref|ZP_09953120.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingomonas
elodea ATCC 31461]
Length = 311
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 153/322 (47%), Gaps = 30/322 (9%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPR 65
+ T+ G GFLGRYV Q+L G++V V E PR LK G LGQ + +
Sbjct: 5 LVTLIGGGGFLGRYVAQELLAAGARVRV----VERKPRDAWFLKTQGGLGQTQLVVGDIT 60
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
T+ + ++ V+N +G + FE V H R A G + IS L
Sbjct: 61 RPETLARALQGSDAVVNFVG----ILSGDFEKV-HVDGARNVAEAASAAGAGALVHISAL 115
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKF--NFFP 183
GA ++SPS +KAA E+AVL P ATI+RP+ + G ED +N++A + P
Sbjct: 116 GADAASPSAYGRSKAAGEQAVLAAFPGATILRPSIVFGREDAFVNRFAGMIAGAPRGIVP 175
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
+ G TR QPV+V DVA AVTAAL D GK Y LGGPD+ ++ L + I
Sbjct: 176 VV-RGETRFQPVFVADVAQAVTAALADPAAHGGKTYALGGPDVLSMTGLLRWIAGAIGRK 234
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
P +++P V+ L+ +P P+ R D+ +D +V A L
Sbjct: 235 PCLIELPDSVSG--------LIAALPGTPITR------DQFAMLQADNVVPAGAEGLTAL 280
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
G+ P + +L+ +R+ G
Sbjct: 281 GVTPTPMAAVAPSWLVRFRQAG 302
>gi|395782193|ref|ZP_10462597.1| hypothetical protein MCY_00994 [Bartonella rattimassiliensis 15908]
gi|395419132|gb|EJF85433.1| hypothetical protein MCY_00994 [Bartonella rattimassiliensis 15908]
Length = 332
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 152/320 (47%), Gaps = 12/320 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG TGF+GRYVV+ L K G +V V R C ++ +GD+GQ +K + +
Sbjct: 13 LITVFGGTGFVGRYVVETLTKRGYRVRVAVR-CPQKAYYMLQIGDVGQTQMLKTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G + +F++ A +A + E G + I +S L A+
Sbjct: 72 SVARALLGADAAVFLPGSLKQANQSNFKNTQIDGAYNVAELTAEAG--LPLIYMSTLVAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ K E+ + + P A I+RP+ + G ED N A + PLFG G
Sbjct: 130 ENASCLYARVKFMGEQIIHNKHPQALIIRPSVIFGPEDCFFNTLADLSRFLPIMPLFGSG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+R+QPVYV DVA +T AL D + GK Y+LGGP I T E + I +
Sbjct: 190 KSRLQPVYVGDVAEFITRAL-DGQIAWGKNYDLGGPQIITFQNALENILKIIHRKKTILS 248
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLGI 304
+P V + E + K+PF P L ++I D IVS +N T + +GI
Sbjct: 249 IPLSVGLLIGGIFET-IGKLPFI---PTLVTTNQIRFLQVDNIVSQEAIENGYTLEGVGI 304
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + + YL +R G
Sbjct: 305 TPRAMAAFLPSYLWRFRPHG 324
>gi|28416365|gb|AAO42655.1| GM13757p [Drosophila melanogaster]
Length = 327
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 128/218 (58%), Gaps = 11/218 (5%)
Query: 34 VLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNY 93
+++P+RG + D LK+ GDLGQ++ +N D +I+ + +NVVINL+GR++ET+N+
Sbjct: 1 MILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNF 60
Query: 94 SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP-------SRVFSTKAAAEEAV 146
F+DV+ AERIA IA+E G+ RFI +S L ++ S +K E V
Sbjct: 61 KFKDVHVNGAERIARIARE-AGVERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRV 119
Query: 147 LRELPWATIMRPAAMIGTEDRLLNKWAQ-FVKKFNFFPLFGDGSTRI-QPVYVVDVAAAV 204
P ATI+RPA + G+EDR L +A + ++F PL+ G + QPVYV DVA A+
Sbjct: 120 RDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAI 179
Query: 205 TAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
A K D S G+IY+ GP + + EL + + +R+
Sbjct: 180 INAAK-DPDSAGRIYQAVGPKRYQLSELVDWFHRLMRK 216
>gi|195591888|ref|XP_002085668.1| GD14892 [Drosophila simulans]
gi|194197677|gb|EDX11253.1| GD14892 [Drosophila simulans]
Length = 327
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 128/218 (58%), Gaps = 11/218 (5%)
Query: 34 VLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNY 93
+++P+RG + D LK+ GDLGQ++ +N D +I+ + +NVVINL+GR++ET+N+
Sbjct: 1 MILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIREAVKHSNVVINLVGRDFETKNF 60
Query: 94 SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP-------SRVFSTKAAAEEAV 146
F+DV+ AERIA IA+E G+ RFI +S L ++ S +K E V
Sbjct: 61 KFKDVHVNGAERIARIARE-AGVERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRV 119
Query: 147 LRELPWATIMRPAAMIGTEDRLLNKWAQ-FVKKFNFFPLFGDGSTRI-QPVYVVDVAAAV 204
P ATI+RPA + G+EDR L +A + ++F PL+ G + QPVYV DVA A+
Sbjct: 120 RDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAI 179
Query: 205 TAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
A K D S G++Y+ GP + + EL + + +R+
Sbjct: 180 INAAK-DPDSAGRVYQAVGPKRYQLSELVDWFHRLMRK 216
>gi|83313030|ref|YP_423294.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Magnetospirillum
magneticum AMB-1]
gi|82947871|dbj|BAE52735.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Magnetospirillum
magneticum AMB-1]
Length = 339
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 154/336 (45%), Gaps = 37/336 (11%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMKFNPR 65
+ TVFG +GF+GR VV++LA G V R DP LK MGD+GQ+ P++ +
Sbjct: 9 VVTVFGGSGFIGRNVVKRLAAQGWVV----RAAVRDPIAAEFLKPMGDVGQVTPLRADIT 64
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D + +A + V+N +G YE+ +F D H A + G+ R + +S L
Sbjct: 65 DPKAVAMAVAGVDAVVNAVGILYESGRATF-DAIHVKGAANVAAAAKAAGVARLVHVSAL 123
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP-- 183
GA +S + +KAA EEAVL P A+++RP+ + G +D N++ + P
Sbjct: 124 GADKNSEAAYARSKAAGEEAVLAAFPGASVVRPSVVFGPDDDFFNRFGKLAMVSPVLPVF 183
Query: 184 -----------------LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDI 226
LFG G QPV V DVA AV L DD GK +ELGGP
Sbjct: 184 TGDGFKPVCGETGCSIDLFGSGGPIFQPVSVSDVAQAVVQIL-DDTRHAGKTFELGGPRR 242
Query: 227 FTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAY 286
+++ E+ EL+ + V +PF + M + L+ +P P + D++
Sbjct: 243 YSMKEIMELVMSSTGRQRLLVPLPF----GLGMLQATFLQMLPKP-----MLTKDQVRMM 293
Query: 287 TSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRK 322
D +V +LGI P + Y+ Y K
Sbjct: 294 KVDNVVRGGKPGLTELGITPTSAEAILPLYMKRYGK 329
>gi|209883602|ref|YP_002287459.1| dehydrogenase [Oligotropha carboxidovorans OM5]
gi|337739329|ref|YP_004631057.1| NADH dehydrogenase (ubiquinone) [Oligotropha carboxidovorans OM5]
gi|386028348|ref|YP_005949123.1| NADH dehydrogenase (ubiquinone) [Oligotropha carboxidovorans OM4]
gi|209871798|gb|ACI91594.1| dehydrogenase [Oligotropha carboxidovorans OM5]
gi|336093416|gb|AEI01242.1| NADH dehydrogenase (ubiquinone) [Oligotropha carboxidovorans OM4]
gi|336096993|gb|AEI04816.1| NADH dehydrogenase (ubiquinone) [Oligotropha carboxidovorans OM5]
Length = 321
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 160/322 (49%), Gaps = 21/322 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LA+ ++ V R E HL+ +G +GQI P++ N R
Sbjct: 8 LVTVFGGSGFLGRHVVRALAQRDYRLRVGVRRPELA-GHLQPLGKVGQINPVQANVRYPA 66
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++A M A+VV+NL+G E F V+ A+ IA A R + +S LG
Sbjct: 67 SVEAAMRGAHVVVNLVGILSEGGAQRFNRVHARGAQVIAQAAARQ--GARVVHVSALGVG 124
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S SR ++K E AVL P ATI+RP+ + G ED N++A PL G
Sbjct: 125 TESTSRYLASKTLGERAVLDASPDATIIRPSIVFGPEDHFANRFAALACLSPVLPLVG-A 183
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
T++QPV+ V AA A D T G YE+GGP++ T+ + E + P +
Sbjct: 184 DTKLQPVF-VGDVAAAIADAVDGKTQPGTAYEIGGPEVVTMRQAVETILRIAGRNPALIS 242
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDL 302
+PF +AK A F PG F L D++ SD +VS+ A T + L
Sbjct: 243 LPFGLAKLNAA----------FLQFAPGDFKLTPDQVEMLKSDNVVSEAAKREGRTLEGL 292
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P + YL +RK G
Sbjct: 293 GIAPESMVAVLPSYLWRFRKAG 314
>gi|328777827|ref|XP_624255.2| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial [Apis mellifera]
Length = 324
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 158/293 (53%), Gaps = 23/293 (7%)
Query: 33 QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRN 92
Q+++P R R LK+ GDLGQ++ F+ RD+ +I T+ +NVVINLIG YETRN
Sbjct: 7 QLILPHRCDHYHIRELKVGGDLGQVLYHPFDLRDEESIIRTIKYSNVVINLIGSNYETRN 66
Query: 93 YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS-------SSPSRVFSTKAAAEEA 145
+SFEDV+ A +A +AK+ + RFI +SCL S++ TK E A
Sbjct: 67 FSFEDVHVEGARTLAKLAKQ-CNVERFIHMSCLNVEEKPTPIILKESSKILKTKWKGELA 125
Query: 146 VLRELPWATIMRPAAMIGTEDRLLNKWA-QFVKKFNFFPLFGDGS-TRIQPVYVVDVAAA 203
V E P ATI+RP+ + G +D+ +N + Q N PL+ G T QPV + DV +
Sbjct: 126 VKEEFPEATIIRPSVIYGHKDKFINHYMDQNRLNSNRLPLWDKGEKTEKQPVSIHDVISG 185
Query: 204 VTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREYPHYVKVP----FPVAKAVA 258
+ A +++ T +GK Y+ GP + ++EL + M+D ++ + + +K+ P A
Sbjct: 186 IVAIVRNSDT-VGKTYQFVGPKRYKLNELVKWMFDIKLKYFKNNIKIVDMKYDPYAWLKT 244
Query: 259 MPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL-TFQDLGIVPHKLK 310
RE + P L+ + E + + SD I D+AL T +DLGI P L+
Sbjct: 245 SLREYIYAVHP---TTDMLWEVLECH-HISDKI--DSALPTLEDLGITPIDLQ 291
>gi|340505037|gb|EGR31413.1| ndufa9 protein, putative [Ichthyophthirius multifiliis]
Length = 359
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 146/307 (47%), Gaps = 18/307 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC---EDDPRHLKLMGDLGQIVPMK- 61
SG+ T+FG TGFLG YV L +GS V+ P +D + LKL GQ MK
Sbjct: 38 SGLRVTIFGATGFLGPYVGAYLGYIGSDVIFPHAHVYDYDDYVKELKLCAGTGQSYLMKH 97
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFED-VNHFMAERIAGIAKEHGGIMRFI 120
FN DD A + +NVVINL+G + ++ N +A++IA + + R I
Sbjct: 98 FNFDDDKMYDAAIRNSNVVINLVGSRLQVKDLKQAAYANIHIAKKIAEACARNSNVRRLI 157
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
S GA SPS TK EEAVL P AT+MRP + G +D W + + ++
Sbjct: 158 HFSACGADPKSPSPDLQTKFHGEEAVLNIFPNATVMRPTTIYGMQDYFTRHWIKEREWWH 217
Query: 181 FFPLFGDGST-RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
F + D T + QP+ + DV AV +LK S G+IYELGGP ++ E+ E++ +
Sbjct: 218 HFNIVTDDCTAKRQPILINDVCQAVMNSLKIQ-ESAGQIYELGGPHQYSRLEIYEILANI 276
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299
P K + ++ L K+ FN++ I D +VS N T
Sbjct: 277 TGRPP----------KLAYLSHDLAL-KLTQKFYNWEFFNMETIIKNKLDLVVSGNHKTI 325
Query: 300 QDLGIVP 306
DL + P
Sbjct: 326 ADLCVQP 332
>gi|16127834|ref|NP_422398.1| NADH-ubiquinone oxidoreductase [Caulobacter crescentus CB15]
gi|221236654|ref|YP_002519091.1| NADH-ubiquinone oxidoreductase subunit [Caulobacter crescentus
NA1000]
gi|13425350|gb|AAK25566.1| NADH-ubiquinone oxidoreductase 39 kDa subunit precursor, putative
[Caulobacter crescentus CB15]
gi|220965827|gb|ACL97183.1| NADH-ubiquinone oxidoreductase subunit [Caulobacter crescentus
NA1000]
Length = 319
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 12/301 (3%)
Query: 25 QQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84
+ LAK G +V V R + ++++GD+GQI ++ N R+ +++ + A +NL+
Sbjct: 20 RALAKAGHRVRVAVR-QPNLAYKMRMLGDVGQIEVVQANVRNPSSVARALDGAEGCVNLV 78
Query: 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEE 144
G +E+ F V H M R A G+ + +S +GA +SP++ +K E
Sbjct: 79 GVLFESGRQKFLSV-HTMGARNVAEAAAKAGVKHLVHVSAIGADVNSPAKYARSKGEGEA 137
Query: 145 AVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204
AV P ATI+RP+ + G ED N++AQ PL G G TR QPV+V DVAA +
Sbjct: 138 AVREAFPGATIVRPSIVFGPEDDFFNRFAQMAALAPALPLVG-GDTRFQPVFVGDVAAVI 196
Query: 205 TAALKDDGTSMGKIYELGGPDIFTVHELAEL-MYDTIREYPHYVKVPFPVAKAVAMPREI 263
A+ + G YELGGP ++T+ E+ EL + +T R P + +P+PVA + ++
Sbjct: 197 AKAVASP-AAAGVTYELGGPTVYTMREILELILVETGRNRP-LIPLPWPVASLIGSLGDL 254
Query: 264 LLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKG 323
+ +P PL D++ SD + + G+ P ++ YL YRKG
Sbjct: 255 VAGVIPPPL------TSDQVQMLKSDNVAEQGLPGLAEAGVTPTAVEAIVPSYLYRYRKG 308
Query: 324 G 324
G
Sbjct: 309 G 309
>gi|310816858|ref|YP_003964822.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ketogulonicigenium
vulgare Y25]
gi|385234454|ref|YP_005795796.1| NADH ubiquinone oxidoreductase [Ketogulonicigenium vulgare WSH-001]
gi|308755593|gb|ADO43522.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ketogulonicigenium
vulgare Y25]
gi|343463365|gb|AEM41800.1| NADH ubiquinone oxidoreductase, putative [Ketogulonicigenium
vulgare WSH-001]
Length = 328
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 163/326 (50%), Gaps = 25/326 (7%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR---HLKLMGDLGQIVPMKF 62
SGI+ TVFG +GFLGRYVV++LA+ G +V R DP L+ G +GQ+ P+
Sbjct: 2 SGIV-TVFGASGFLGRYVVRRLAQAGWRV----RAAVRDPNLALFLRPYGAVGQVEPVAC 56
Query: 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
N RD ++ + A+ IN IG E R +F+ V+H A IA A+ G+ R + +
Sbjct: 57 NIRDAASVARVLDGADAAINCIGILTELRANTFDAVHHLGAALIARTARA-AGVQRLVHV 115
Query: 123 SCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
S LG S F +KAA E AVL P A +++PA M G +D N+ A + +
Sbjct: 116 SALGTGGQG-SAYFDSKAAGEAAVLAAFPSAVVVQPAVMFGRDDHFFNRLAG-LARLPVL 173
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
P+ G G ++QPV+V DVAAA+ AL D + Y L GP++ T+ ++A+ + R
Sbjct: 174 PIVG-GDVKMQPVWVDDVAAAIVTALAPDFAA--GTYPLAGPEVMTMQQIAQQVLQVTRR 230
Query: 243 YPHYVKVPFPVAKAVAMPREILLKK----VPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
V +P +A+ A E + +P PL R D+I + + D +
Sbjct: 231 STRIVDLPLGLARFAAGIAEFGHRASFSILPVPLSR------DQIAMLSYTHHLPDGS-G 283
Query: 299 FQDLGIVPHKLKGYPTEYLIWYRKGG 324
FQ GI P +YL +R G
Sbjct: 284 FQPFGITPAPTGVVLPDYLWRFRPAG 309
>gi|302381883|ref|YP_003817706.1| NAD-dependent epimerase/dehydratase [Brevundimonas subvibrioides
ATCC 15264]
gi|302192511|gb|ADL00083.1| NAD-dependent epimerase/dehydratase [Brevundimonas subvibrioides
ATCC 15264]
Length = 329
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 155/320 (48%), Gaps = 8/320 (2%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+S + TVFG +GF+G V+ LAK G +V V R + L+++GD+GQI P++ +
Sbjct: 4 FSPGLVTVFGGSGFVGTQAVRALAKRGWRVRVAVR-KPHLAQDLRILGDVGQIQPVRCDI 62
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+ A + A+ +NL+G +E F D H R A E G+ RF+ +S
Sbjct: 63 TRPADVAAALKGADAAVNLVGLLFEAPGRGF-DAAHVEGTRNIAGACEAAGVARFVHVSA 121
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GA +S + +K AE A P I+RP+ + GT D LN++A PL
Sbjct: 122 IGADVNSEADYGRSKGEAEAAARTVKPDTVILRPSIVFGTGDGFLNRFAAMAGTAPALPL 181
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G T+ QPV+V DVA A+ ++ + + +ELGGP++++ ++ L Y
Sbjct: 182 IGGGKTKFQPVWVGDVAEAIARSVTRI-DAAARTFELGGPEVWSFKDI--LKYILRETGK 238
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+ P PV A M R + L + P + D++ D +V+ A LGI
Sbjct: 239 SRLLAPLPVFVAATMGRVMQLSSLVGIAP---VLTRDQVLMLKVDNVVAPGAEGLAALGI 295
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P L+ YL YR+GG
Sbjct: 296 EPTGLEAIAPSYLWRYRRGG 315
>gi|340027819|ref|ZP_08663882.1| NAD-dependent epimerase/dehydratase [Paracoccus sp. TRP]
Length = 330
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 156/319 (48%), Gaps = 12/319 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GFLGR + + +A G ++ V R + ++ G GQ+ P+ N RDD
Sbjct: 6 LVTIYGGSGFLGRQIARIMAAEGWRIRVAVR-RPYEAGVVRTYGAPGQVEPVPCNVRDDM 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A MA A+ VIN +G +F+ ++ A R+A IA E G + F+ +S LGA
Sbjct: 65 SVAACMADADAVINCVGIMVREGKNTFDTIHEEAAGRVARIAAETG-VKHFVHVSALGAD 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK--KFNFFPLFG 186
+ S ++K E VL P A I+RP+ + GT+DR N+ A + F F P
Sbjct: 124 PDAASNYAASKGRGEAEVLTHRPDAVILRPSIIFGTDDRFYNRIASLTRLGPFLFVP--- 180
Query: 187 DGSTRIQPVYVVDVA-AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
T +QPV+V+DVA AAV AA + G+ IYELGGPD+ T+ ++A +
Sbjct: 181 GARTEVQPVHVLDVARAAVMAASGEAGSG---IYELGGPDVLTMRDVARQVLTATARRRA 237
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ VP +A + + ++ V L + D+ VS TF DLGI
Sbjct: 238 IIGVPHWLAGLMGFALDT-VQVVSGGLLTNRVLTRDQARQLRQPNRVSGKVRTFADLGIE 296
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P YL +R G
Sbjct: 297 PTAAPPIIEGYLWRFRPTG 315
>gi|307544363|ref|YP_003896842.1| NAD-dependent epimerase/dehydratase [Halomonas elongata DSM 2581]
gi|307216387|emb|CBV41657.1| NAD-dependent epimerase/dehydratase [Halomonas elongata DSM 2581]
Length = 305
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 146/301 (48%), Gaps = 18/301 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
VFG TGFLG +V++L + G P R PR D + ++ + RD +
Sbjct: 12 VVFGGTGFLGAVLVRELVESGR----PARLVARRPRWPSWAEDSDPLEILEADIRDPRRV 67
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ A V+N +RN FED++ A +A +E GI R +Q+S +GAS
Sbjct: 68 AEALEGAGAVVNATSLYVASRNVGFEDIHVTAAAALARQVRE-AGIERLVQLSGIGASRD 126
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S S +A E AV+ LP A I+RP+ + G D L+ A+ + PLFG G
Sbjct: 127 SASAYVRARAHGEIAVMDALPKAVILRPSVLFGRNDSFLSNLARLT-RLPAIPLFGQGHN 185
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPHYVKV 249
R+QPV+VVDVA A+ D ++ELGG DI + E+ L+ + RE P V
Sbjct: 186 RLQPVHVVDVARAIVRLTGADRPER-YLFELGGADILSYREVLSLVMQHLGRERP---LV 241
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
P P A A+ R + LP P L D++ SD +VS+ TF DLG+ P L
Sbjct: 242 PLPFAAWHALARGLGW------LPEPPLTR-DQVILMQSDNLVSEGVGTFADLGMQPRTL 294
Query: 310 K 310
+
Sbjct: 295 R 295
>gi|395764900|ref|ZP_10445520.1| hypothetical protein MCO_00396 [Bartonella sp. DB5-6]
gi|395413717|gb|EJF80179.1| hypothetical protein MCO_00396 [Bartonella sp. DB5-6]
Length = 332
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 158/321 (49%), Gaps = 14/321 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R C ++ +G++GQ +K + +
Sbjct: 13 LITVFGGSGFVGRHVVETLTKRGYRVRIAVR-CPQKAYYMLQIGEVGQTQMLKTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G +T +F+ + + ++ +A + G + I +S L A+
Sbjct: 72 SVARALLGADGAVFLPGSLAQTNQSNFQKIQTEGTQNVSELAAKAG--IPLIYMSTLVAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ K E+ V + P A IMRP+ + G ED N A + PLFG G
Sbjct: 130 QRASCLYARVKFMGEQIVQNKHPQAIIMRPSVIFGPEDCFFNTLADLSRFLPIMPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV D+A V AL++ + GKIY+LGGP I T + + ++ I
Sbjct: 190 QSKLQPVYVGDIAEFVVRALEEH-VTFGKIYDLGGPQIMTFQNVLKSIFQIIHR--KKTT 246
Query: 249 VPFPVAKAVAMPREI-LLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLG 303
+P P+ + + + ++ K+PF P L D+I D +VS +N T + +G
Sbjct: 247 LPMPLFTGLLIGNLLGIIGKLPF---VPTLLTADQIRFLQIDNVVSQAAIENGYTLEGVG 303
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
IVP + YL +R G
Sbjct: 304 IVPRAMAALLPSYLWRFRPHG 324
>gi|381167912|ref|ZP_09877117.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Phaeospirillum
molischianum DSM 120]
gi|380682988|emb|CCG41929.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Phaeospirillum
molischianum DSM 120]
Length = 331
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 169/332 (50%), Gaps = 41/332 (12%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR +V +LA G V V R L MG++GQI ++ + D
Sbjct: 5 LVTVFGGSGFLGRAIVHRLAGRGWAVRVAVR-HPSSAEFLLPMGEVGQISLVRADIGDVA 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ A +A A+ VINL+G E+ +F+ V+ A IAG A++ GI F+Q+S LGAS
Sbjct: 64 AVTAAVAGADAVINLVGILTESSRRTFQAVHADGAANIAGAARD-AGIKAFVQMSALGAS 122
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP----- 183
+ S + +KAA E AV +P ATI+RP+ + G +D N++ + P
Sbjct: 123 ARSDAAYARSKAAGEAAVRDAIPGATILRPSVVFGPDDDFFNRFGKMAVLSPVLPVFTGD 182
Query: 184 --------------LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTV 229
LFG G R QPVYV DVA+AV A L DD G+ YELGGP ++++
Sbjct: 183 GYRVVWNGARPSLDLFGTGGPRFQPVYVGDVASAVAAVL-DDPALAGRTYELGGPAVYSM 241
Query: 230 HELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPF-PLPRPGLFNLDEINAYTS 288
++ EL+ + H +P P+ +AM + + + +P PL R D++
Sbjct: 242 KQIMELVLSS--SGLHRRLLPLPM--GIAMTQARVFEYLPTQPLTR------DQVRMMRV 291
Query: 289 DTIVSDNALTFQDLG--------IVPHKLKGY 312
+ I++ + +LG I+PH ++ Y
Sbjct: 292 NNILTGDEPGLGELGITATPAETILPHYMRRY 323
>gi|167648908|ref|YP_001686571.1| NADH dehydrogenase [Caulobacter sp. K31]
gi|167351338|gb|ABZ74073.1| NADH dehydrogenase [Caulobacter sp. K31]
Length = 318
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 11/300 (3%)
Query: 25 QQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84
++LAK G +V V R R ++++GD+GQI ++ N R+ ++ + A +NL+
Sbjct: 20 RRLAKAGYRVRVAVRNPNLGYR-MRMLGDVGQIEVVQANVRNAASVARALDGAEAAVNLV 78
Query: 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEE 144
G ET F+ + H M R + G+ R +QIS +GA ++ S+ TKA E
Sbjct: 79 GVLLETGRQKFQTL-HVMGARTVAEQAKAAGVKRLVQISAIGADETASSKYARTKAMGEA 137
Query: 145 AVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204
AV P A ++RP+ + G +D+ NK+ Q F PL G G TR QPV+V DVA V
Sbjct: 138 AVREAFPGAVVIRPSIVFGADDKFFNKFGQMAALFPALPLIGGGETRFQPVFVGDVAQVV 197
Query: 205 TAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREIL 264
A+ G YELGGP +++ +L E++ V +P+ VA + ++
Sbjct: 198 ANAVASPAAE-GLTYELGGPTVYSFKQLLEMILRETGRNRMLVPLPWFVASWIGKLGDL- 255
Query: 265 LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
P+ P D++ + +D + + G++P ++ YL YRKGG
Sbjct: 256 -----SPITPP--LTSDQVESLKTDNVADKGLPGLAEAGVIPTTVESVVPSYLYRYRKGG 308
>gi|119383244|ref|YP_914300.1| NAD-dependent epimerase/dehydratase [Paracoccus denitrificans
PD1222]
gi|119373011|gb|ABL68604.1| NAD-dependent epimerase/dehydratase [Paracoccus denitrificans
PD1222]
Length = 330
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 159/316 (50%), Gaps = 6/316 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GFLGR + + +A G ++ V R ++ ++ G GQ+ P+ N RDD
Sbjct: 6 LVTIYGGSGFLGRQIARTMAAQGWRIRVAVRR-PNEAGVVRTYGAPGQVEPVPCNVRDDL 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ A MA A+ VIN +G +F+ ++ A RIA IA E G + RF+ +S +GA
Sbjct: 65 SVTACMADADAVINCVGIMVREGKNTFDAIHEEAAGRIARIAAETG-VKRFVHVSAIGAD 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S SR ++K E AVL P A I+RP+ + G +D N+ A + + G
Sbjct: 124 PDSASRYAASKGRGEAAVLAHRPDAMILRPSVIFGPDDHFYNRIASMTRLGPILFVPG-A 182
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+T +QPVYV DVA A AA+ +GT+ IYELGGPD+ T+ E+A+ + I V
Sbjct: 183 NTLMQPVYVEDVARA--AAMGAEGTAQPGIYELGGPDMLTMREVAQQVLVAIDRRRAIVG 240
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P +A+ + L++ L + D+ VS TF DL I P
Sbjct: 241 LPHWLARVTGSALD-LVQAATGGLLTNRILTRDQARLLRLPNRVSGEVKTFADLDIEPTA 299
Query: 309 LKGYPTEYLIWYRKGG 324
+YL +R G
Sbjct: 300 APAVIADYLWRFRSSG 315
>gi|395785445|ref|ZP_10465177.1| hypothetical protein ME5_00495 [Bartonella tamiae Th239]
gi|423717656|ref|ZP_17691846.1| hypothetical protein MEG_01386 [Bartonella tamiae Th307]
gi|395424992|gb|EJF91163.1| hypothetical protein ME5_00495 [Bartonella tamiae Th239]
gi|395427056|gb|EJF93172.1| hypothetical protein MEG_01386 [Bartonella tamiae Th307]
Length = 340
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 158/326 (48%), Gaps = 13/326 (3%)
Query: 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKF 62
Y Y +I TVFG +GF+GR+VV+ L K G +V + R E L++ G++GQ +K
Sbjct: 8 YQYPKLI-TVFGGSGFVGRHVVEALTKRGYRVRIAVRRPETAYYMLQI-GEVGQTQMLKT 65
Query: 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
N R+ ++ + A+ I L G + SF++V+ A+ +A +A + I +
Sbjct: 66 NVRNRESVARALIDADAAIFLPGVIDSSGKNSFKNVHIEGAKNVAELASSAD--IPLIHM 123
Query: 123 SCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
S L +++ TKA E+ V A IMRP+ + G ED NK A +
Sbjct: 124 SALNVDTNTSVSYMKTKAQGEQVVQSAHKKAIIMRPSVIFGPEDSFFNKIADISRFSWMI 183
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
P+FG G T++QPVYV D+A V +L+D G+IYELGG ++ T E M I
Sbjct: 184 PMFGGGKTKLQPVYVGDIAEFVIQSLEDK-VKEGQIYELGGKEVITFRHAVEEMLKVILR 242
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----T 298
+ VPF V + L+ K+P P + ++ D+IVS+ A T
Sbjct: 243 KKVLLSVPFSVGTLIGGIFG-LIGKLPL---LPTVLTAQQVKMLKYDSIVSEEAQRDGRT 298
Query: 299 FQDLGIVPHKLKGYPTEYLIWYRKGG 324
+ +GI P ++ YL +R G
Sbjct: 299 LEGVGITPKAMEAVLPSYLWRFRPHG 324
>gi|330993411|ref|ZP_08317346.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Gluconacetobacter
sp. SXCC-1]
gi|329759441|gb|EGG75950.1| NADH-ubiquinone oxidoreductase 40 kDa subunit [Gluconacetobacter
sp. SXCC-1]
Length = 293
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 151/301 (50%), Gaps = 13/301 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ATVFG +GF+G+ VV +LA+ G V V R L+++GD+GQ+VP+ + D+
Sbjct: 1 MATVFGGSGFVGQSVVGRLARAGYVVRVAGRTARLAA-TLRMLGDVGQVVPVVASIMDEA 59
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
A + ++ INL+G +FE ++ A R+A +A G+ R I +S LGA
Sbjct: 60 GCVAALEGCDLAINLVGILSPRGPATFEAIHVEGAARVARLAA-CAGVERLIHVSALGAD 118
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SSPS +KA E AV R +P A I+RP+ + G +A+ + P+FG
Sbjct: 119 VSSPSAYARSKAEGECAVTRAMPGAVIIRPSLIFGVGGPFPAMFARMARFMPVVPVFG-A 177
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPV+V DVA + L DG+ G ++E GGP I T+ ++ +
Sbjct: 178 ATRFQPVWVGDVAEGML-RLATDGSMAGAVFEFGGPRIMTMRQIVAWSARWAGHPRPLFE 236
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
VP +A A A E L KV D++ D +V+ A T + LGI+P
Sbjct: 237 VPRWLANAQASVLEHLPGKV---------LTRDQVRLLYVDNVVAPGARTIEMLGIIPAP 287
Query: 309 L 309
+
Sbjct: 288 M 288
>gi|91789752|ref|YP_550704.1| NAD-dependent epimerase/dehydratase [Polaromonas sp. JS666]
gi|91698977|gb|ABE45806.1| NAD-dependent epimerase/dehydratase [Polaromonas sp. JS666]
Length = 318
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 156/315 (49%), Gaps = 30/315 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM----KFNPRDD 67
+ G TGF+GR+V ++LA++ +V V R D+ RHL Q +PM + + D
Sbjct: 6 ILGGTGFVGRHVCEKLAQLQCRVTVATRRL-DNARHL-------QTLPMLDVIEIDVHDS 57
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ + +A + V+NLI + T +FE H A E G+ R + IS LGA
Sbjct: 58 AALTSLLAGHDAVVNLIAILHGT-EAAFEKA-HVQLPLALVRACEAAGLRRIVHISALGA 115
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
S SS S +KA E +L T++RP+ + G ED+ LN +A+ + F PL
Sbjct: 116 SVSSASMYQRSKARGEAVLLSAGLDVTLLRPSVIFGAEDKFLNTFARLQQLFPVVPLAAS 175
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM--YDTI---RE 242
R QPV+V DVA+AV L+D +S+G++YE GPD+FT+ +L EL Y + +
Sbjct: 176 -QARFQPVWVEDVASAVVHCLQDS-SSIGQVYEACGPDVFTLRQLVELAGRYAGVNGGKG 233
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
P + +P P+ + A E+ LP L + D ++A +D + S + L
Sbjct: 234 RP-VIALPAPLGRLQARLMEL--------LPGEPLLSRDNLDAMQTDNVASGKLPGLKAL 284
Query: 303 GIVPHKLKGYPTEYL 317
GI P L YL
Sbjct: 285 GITPAALGAIAPSYL 299
>gi|406707634|ref|YP_006757986.1| NAD dependent epimerase/dehydratase family protein [alpha
proteobacterium HIMB59]
gi|406653410|gb|AFS48809.1| NAD dependent epimerase/dehydratase family protein [alpha
proteobacterium HIMB59]
Length = 309
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 146/271 (53%), Gaps = 12/271 (4%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
VFG+TGF+GR + ++L GS+++ P R R++ L GD+GQI ++F+ ++ + I+
Sbjct: 8 VFGSTGFIGRSLTKRLLANGSRLICPVRNPNRVKRNI-LSGDIGQIDVVEFDIQNLDAIE 66
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+ +VV+NL+G YE N+SFE + + ++IA A+++ F+ IS LG++ S
Sbjct: 67 RLIENCDVVVNLVGLLYEKNNFSFELAHFLLPKKIATYAEKYHK--PFVHISSLGSTYQS 124
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S +K EE + I+RP+ + G ED +N++ + K F PLF G T+
Sbjct: 125 NSNYLVSKKMGEEFIQSNNNNYIIIRPSVVYGEEDNFINQFGRMAKILPFLPLFKKGETK 184
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
QP+YV D++ + + + + G ++FT E+ +++++++ ++ +P
Sbjct: 185 FQPIYVNDLSLMIFNLINNFDNYKNQNISAVGQEVFTFKEILSHIFNSLQKKERFINIPS 244
Query: 252 PVAKAVAMPREILLKKVPFPLPRPGLFNLDE 282
A I+ K+ LP+P LF D+
Sbjct: 245 FFA--------IIQGKIMEKLPKP-LFTYDQ 266
>gi|312088766|ref|XP_003145987.1| hypothetical protein LOAG_10415 [Loa loa]
Length = 257
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 105/166 (63%), Gaps = 8/166 (4%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG + TVFG TG LG+ ++ +LAK G Q+++P R R LK+ G+LGQ++ + F
Sbjct: 56 FSGNVVTVFGCTGLLGKLLINRLAKEGHQIILPSRQEPYYTRQLKIYGELGQVLLLPFQL 115
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D+ +I+ M +NVV+NLIG ET+NYSFE+ + A RIA IAKE GI +FI +S
Sbjct: 116 KDEESIRQAMRYSNVVVNLIGTRCETKNYSFEETHVEGARRIARIAKEM-GIQKFIHMSA 174
Query: 125 LGASSSSPSRVFS-------TKAAAEEAVLRELPWATIMRPAAMIG 163
+ AS ++P +F+ TK EE V E P AT++RP+ M G
Sbjct: 175 MNASKNTPPTLFNKPSQFLLTKGLGEEVVREEFPSATVLRPSMMYG 220
>gi|145490959|ref|XP_001431479.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398584|emb|CAK64081.1| unnamed protein product [Paramecium tetraurelia]
Length = 351
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 151/309 (48%), Gaps = 21/309 (6%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGDLGQ-IVPMK 61
SGI AT+ G T F G Y+ L +GS+++ P ED R LK GQ +
Sbjct: 29 SGIRATIHGGTSFSGIYMGGMLGNIGSELIFPHNHQYNYEDHVRELKTTSGPGQNWLLHD 88
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYET---RNYSFEDVNHFMAERIAGIAKEHGGIMR 118
N + I+ TM +NVV+NL+G + + + + + ++ E++ K G++R
Sbjct: 89 MNYDNKEMIEWTMKNSNVVVNLLGPQKTSEKQKGFRVDQLSQCQKEQLKHALKT-PGVIR 147
Query: 119 FIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKK 178
I S GA+ + S TK E+ VL P ATI RP+ M+G D W +
Sbjct: 148 LIHFSACGANPHAESLDLQTKYIGEQEVLNAFPNATIFRPSVMVGDNDDFAYHWQVQKRY 207
Query: 179 FNFFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
F+ F + D + QP++V DVA A+ ALK T +G+ YELGGP ++T+ E E+ +
Sbjct: 208 FHNFNIVPDNCQAKRQPIFVQDVAQAMLNALKMPET-IGQTYELGGPHVYTLLECYEMFH 266
Query: 238 DTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297
+ ++ P K + +++LLK + +P FN+D I + D IV +
Sbjct: 267 NIVQRPP----------KLAHIDKQLLLKIAQY-IPNWKYFNIDYILKHGDDMIVQQGSK 315
Query: 298 TFQDLGIVP 306
T DL + P
Sbjct: 316 TIDDLCVRP 324
>gi|295691425|ref|YP_003595118.1| NAD-dependent epimerase/dehydratase [Caulobacter segnis ATCC 21756]
gi|295433328|gb|ADG12500.1| NAD-dependent epimerase/dehydratase [Caulobacter segnis ATCC 21756]
Length = 321
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 152/301 (50%), Gaps = 10/301 (3%)
Query: 25 QQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84
+ LAK G +V V R + ++++GD+GQI ++ N R +++ + A +NL+
Sbjct: 20 RALAKAGYRVRVAVR-QPNLAYRMRMLGDVGQIEVVQANVRVPSSVARALDGAEACVNLV 78
Query: 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEE 144
G +E+ F+ + H M R A G+ R + +S +GA ++ ++ +K E
Sbjct: 79 GVLWESGRQKFQSI-HAMGARNVAEAAAKVGVKRLVHVSAIGADVNATAKYARSKGEGEA 137
Query: 145 AVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204
AV P ATI+RP+ + G ED N++AQ PL G G TR QPV+V DVAA +
Sbjct: 138 AVRAAFPGATIVRPSIVFGPEDDFFNRFAQMAVLAPVMPLVG-GDTRFQPVFVGDVAAVI 196
Query: 205 TAALKDDGTSMGKIYELGGPDIFTVHELAEL-MYDTIREYPHYVKVPFPVAKAVAMPREI 263
A+ ++G YELGGP ++T+ E+ EL + +T R P + VP+P+A + ++
Sbjct: 197 ANAVASP-AAVGVTYELGGPTVYTMREILELILTETGRNRP-LLPVPWPLAGLIGTLGDL 254
Query: 264 LLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKG 323
+P P D++ SD + + G+VP ++ YL YRKG
Sbjct: 255 QASILPLAPP----LTTDQVEMLKSDNVAETGLPGLAEAGVVPTAVEAVVPTYLYRYRKG 310
Query: 324 G 324
G
Sbjct: 311 G 311
>gi|158422640|ref|YP_001523932.1| NAD dependent epimerase [Azorhizobium caulinodans ORS 571]
gi|158329529|dbj|BAF87014.1| NAD dependent epimerase [Azorhizobium caulinodans ORS 571]
Length = 328
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 164/321 (51%), Gaps = 19/321 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GFLGR+VV+ LA+ G +V V R E L+ MG +GQI ++ N R +
Sbjct: 15 LVTVFGGSGFLGRHVVRALARRGYRVRVAVRRPELAG-FLQPMGYVGQIQVIQANLRYPD 73
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + A+ V+NL+G + SF+ V A +A A R + +S +GAS
Sbjct: 74 SVRRAVEGADAVVNLVGILAPSGRQSFKAVQAAGARAVAEAAAAV--GARLVHVSAIGAS 131
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SS S TKA E AV +P A I+RP+ + G ED NK+A + PL G G
Sbjct: 132 ASSASDYAKTKAEGEAAVRAAVPDAIILRPSIVFGPEDDFFNKFAGMARMSPVLPLIGGG 191
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QPV+V DVA AV A++ G YELGGP++ T +L I V
Sbjct: 192 QTRFQPVFVGDVAEAVERAVEGLAKP-GATYELGGPEVRTFEQLLRTTLHEIGAKRPLVS 250
Query: 249 VPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNA----LTFQDLG 303
+PF VA V + +K+P P+ + D++ SD +VSD A T + LG
Sbjct: 251 LPFGVAACVGS----IAQKLPGAPITK------DQVELLKSDNVVSDAAKAEGRTLEGLG 300
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
+ P L+ YL +RK G
Sbjct: 301 VTPTALESILGSYLWRFRKAG 321
>gi|103487617|ref|YP_617178.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Sphingopyxis
alaskensis RB2256]
gi|98977694|gb|ABF53845.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Sphingopyxis
alaskensis RB2256]
Length = 312
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 25/323 (7%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMK 61
+ G + TV G GFLGRYVVQ+L G++V + + DPR LK +G LGQ +
Sbjct: 4 FDGQLITVLGGGGFLGRYVVQRLLARGARVRI----AQRDPRAATFLKPLGGLGQTQFVH 59
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
+ RD ++ + ++ VINL+G + R + H +A AK G +
Sbjct: 60 ADVRDAASVARAVQGSDAVINLVGAFDDMRAVQADGAGH-----VATTAKAAGA-RALVH 113
Query: 122 ISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF 181
+S +GA SPS +K E AV A I+RP+ + G EDR +N++A ++
Sbjct: 114 VSAIGADRDSPSAYGRSKGDGEAAVRAAFTGAAILRPSIIFGREDRFINRFAGMMRLAPV 173
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
P+ + QPVYV DVA AV AAL D T+ G+++ELGGP + T+ EL + D
Sbjct: 174 MPVIAP-QAKFQPVYVGDVADAVVAALAD--TATGRLFELGGPQVLTMRELLRWIADATG 230
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
P ++ VP +A A+A F D+ SD +V+ A +
Sbjct: 231 RSPLFIDVPDFLASALA---------TGFGWAPGAPITRDQWLMLQSDNVVASGAAGLAE 281
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
LGI P L +L+ YR+ G
Sbjct: 282 LGITPTPLAAVADGWLVQYRRHG 304
>gi|319898225|ref|YP_004158318.1| NADH-ubiquinone oxidoreductase [Bartonella clarridgeiae 73]
gi|319402189|emb|CBI75720.1| putative NADH-ubiquinone oxidoreductase [Bartonella clarridgeiae
73]
Length = 332
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 153/320 (47%), Gaps = 12/320 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GRY+V+ L K G +V + R C ++ +G++GQ +K + R+
Sbjct: 13 LITVFGGSGFVGRYIVETLTKRGYRVRIAVR-CPQKAYYMLQIGEVGQTQMLKTDVRNYA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ ++ A+ + L G +T +F+++ A ++ + + G + I +S L
Sbjct: 72 SVANALSGADGAVFLPGGLAQTNKPNFQNIQVDGARNVSELTIKAG--IPLIYMSTLITD 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ KA +E+ V P A IMR + + G ED N A F + PLFG G
Sbjct: 130 KNASFSYARAKALSEQIVRNTHPQAIIMRSSVIFGPEDCFFNVLANFSRFMPIMPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV D+A V AL+ +GK Y+LGGP IFT E + I V
Sbjct: 190 QSKLQPVYVGDIAKFVVHALEGH-VILGKSYDLGGPKIFTFQNALEEILKVIHRKKRTVP 248
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLGI 304
+P + L K FPL P L ++I D IVS DN T + +GI
Sbjct: 249 LPLAAGLFIGGFFGTLGK---FPL-FPTLITANQIRFLQRDNIVSQEARDNGYTLEGVGI 304
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
+P + YL +R G
Sbjct: 305 IPKSMTAILPSYLWRFRPQG 324
>gi|85375744|ref|YP_459806.1| NADH ubiquinone oxidoreductase [Erythrobacter litoralis HTCC2594]
gi|84788827|gb|ABC65009.1| NADH ubiquinone oxidoreductase, putative [Erythrobacter litoralis
HTCC2594]
Length = 316
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 161/319 (50%), Gaps = 30/319 (9%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
TVFG +GFLG +V Q L + G+++ + R E + LK + +LGQ+ + N ++++
Sbjct: 13 TVFGGSGFLGTHVAQALLERGARLRIASRNPEKAFK-LKPLANLGQLQFARCNILREDSV 71
Query: 71 KATMAKANVVINLIGREYETRNYSFE-DVNHFM---AERIAGIAKEHGGIMRFIQISCLG 126
A + A++V+NL+G SFE D M A +IA +A + G + +Q+S +G
Sbjct: 72 SACVQGADMVVNLVG--------SFEGDQIALMGKAAGQIAQVAADQG-VEALVQVSAIG 122
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A + K E+ VL P ATI+RP+ + G +D LN +A ++ P+FG
Sbjct: 123 ADPEGQTDYSIGKGLGEKLVLEAFPKATILRPSIVFGADDDFLNMFAGLIQMMPALPVFG 182
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+Q V+V DVA A+ +L D G GKIYELGGP++ T+ E+ E + R +
Sbjct: 183 P-KAELQLVHVDDVAEAIAVSLADPGKHGGKIYELGGPEVLTMLEVNERIAQAQRRNRAF 241
Query: 247 VKVP-FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ +P F A A+P + + D+ + + V+ +A F+ LGI
Sbjct: 242 IPMPDFASATFAALPLTPM--------------SSDQWKMLKAGSTVAADARGFKQLGIE 287
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P L + ++ YR+ G
Sbjct: 288 PRPLGLFLDRMMVPYREKG 306
>gi|349806331|gb|AEQ18638.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9
[Hymenochirus curtipes]
Length = 235
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 117/234 (50%), Gaps = 54/234 (23%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG++GFLGRYVV L K+GSQV++P R D +HL+ MGDLGQ++ M++N +
Sbjct: 52 SGIVATVFGSSGFLGRYVVNGLGKIGSQVILPHRCDPYDIKHLRPMGDLGQLIFMEWNSK 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D +FI +S L
Sbjct: 112 D---------------------------------------------------KFIHMSHL 120
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPS+ KA EEAV P A IM+P+ + G EDR N +A ++ F PL
Sbjct: 121 NADMKSPSKYLRNKAVGEEAVREVFPDAIIMKPSEIYGREDR-FNHYAN-MRWFGGVPLI 178
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
T QP YVVDVA A+ A++D S GK Y L GP+ + +H+L E ++
Sbjct: 179 FGKKTVKQPAYVVDVAKAIVKAIQDP-DSNGKTYALVGPNRYLLHDLVEYIFSV 231
>gi|349686477|ref|ZP_08897619.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Gluconacetobacter
oboediens 174Bp2]
Length = 297
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 150/302 (49%), Gaps = 15/302 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ATVFG GF+GR VV +LA+ G V V R L+++GD+GQ+VP+ + D+
Sbjct: 5 VATVFGGAGFVGRSVVGRLARAGYVVRVVGR-TAAKAATLRMLGDVGQVVPVVASIMDEA 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
A + + VVINL+G +FE ++ A R+A +A G + R I +S LGA
Sbjct: 64 ACVAAIEGSEVVINLVGILSPHGAETFEAIHVEGAGRVARLAAASG-VRRLIHVSALGAQ 122
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SS S +KA E AV R +P A I+RP+ + G + + +A+ + P+FG
Sbjct: 123 VSSASAYARSKAEGECAVSRAMPEAVIVRPSLIFGVDGPIPAMFARMARFMPIVPVFG-A 181
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPV+V DVA + A + G I+E GGP + T M D + +
Sbjct: 182 ATRFQPVWVGDVAEGL-ARIATGADMAGAIFEFGGPKVLT-------MRDIVAWAARWGG 233
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPG-LFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
P P+ A+PR + + PG + D++ D IV+ A T LGI P
Sbjct: 234 HPRPL---FAVPRWLATLQGAVLEHLPGHVLTRDQVRLLYIDNIVAPGARTLDMLGITPS 290
Query: 308 KL 309
+
Sbjct: 291 PM 292
>gi|395767547|ref|ZP_10448080.1| hypothetical protein MCS_01013 [Bartonella doshiae NCTC 12862]
gi|395413910|gb|EJF80363.1| hypothetical protein MCS_01013 [Bartonella doshiae NCTC 12862]
Length = 332
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 154/320 (48%), Gaps = 12/320 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR++V+ L K G +V + R + L++ G++GQ ++ + +
Sbjct: 13 LITVFGGSGFVGRHIVETLTKRGYRVRIAVRRPQKAYYMLQI-GEVGQTQMLQTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G + +F+++ + ++ + E G + I +S L A+
Sbjct: 72 SVARALLGADGAVFLPGSLAQANQSNFQNIQIDGTQNVSELTAEAG--IPLIYMSALVAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ KA +E+ V + P A IMRP+ + G ED N A + PLFG G
Sbjct: 130 QNTSCLYARVKALSEKIVQNKHPQAIIMRPSVIFGPEDYFFNTLADLSRFLPIMPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV D+A V L+ GK Y+LGGP I T + E I +
Sbjct: 190 QSKLQPVYVGDIAEFVARVLEGK-VIFGKSYDLGGPQIMTFQNILENTLKIIHRKKTILS 248
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLGI 304
+PF + + I + K+PF P L D+I D IVS +N T + +GI
Sbjct: 249 IPFSIGLFIGSLLGI-IGKLPF---IPTLLTADQIRFLQMDNIVSPKAIENGCTLEGVGI 304
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
VP + + YL +R G
Sbjct: 305 VPRAMAAFLPSYLWRFRPHG 324
>gi|399068560|ref|ZP_10749079.1| putative nucleoside-diphosphate sugar epimerase [Caulobacter sp.
AP07]
gi|398045648|gb|EJL38348.1| putative nucleoside-diphosphate sugar epimerase [Caulobacter sp.
AP07]
Length = 322
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 147/300 (49%), Gaps = 7/300 (2%)
Query: 25 QQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84
+ LA+ G +V V R + ++++GD+GQI ++ N R+ ++ + A +NL+
Sbjct: 20 RALARAGYRVRVAVR-QPNLAYKMRMLGDVGQIEVVQANLRNAPSVARALQGAEGAVNLV 78
Query: 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEE 144
G +ET F+ + H M R + G+ R + IS LGA SPS+ TKA E
Sbjct: 79 GVLWETGRQKFQAL-HAMGARTVAEQAKAAGVKRLVHISALGADLQSPSKYARTKAMGEA 137
Query: 145 AVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204
AV P A I+RP+ + G +D+ NK+ + F PL G G T+ QPV+V DVAA V
Sbjct: 138 AVREAFPGAVILRPSVVFGADDKFFNKFGEMAGVFPALPLIGGGETKFQPVFVGDVAAVV 197
Query: 205 TAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREIL 264
A+ ++ G YELGGP +++ L E++ V +P+ A + ++
Sbjct: 198 AKAVASP-SAEGLTYELGGPTVYSFKALLEMILRETGRNRLLVPLPWFAASLIGKLGDVF 256
Query: 265 LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
VP P D++ + +D + + + G+VP ++ YL YRKGG
Sbjct: 257 AAVVPLAPP----LTSDQVESLKADNVADNGLPGLAEAGVVPTAVEAIVPSYLYRYRKGG 312
>gi|395789072|ref|ZP_10468602.1| hypothetical protein ME9_00319 [Bartonella taylorii 8TBB]
gi|395431206|gb|EJF97233.1| hypothetical protein ME9_00319 [Bartonella taylorii 8TBB]
Length = 332
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 154/321 (47%), Gaps = 14/321 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GRYVV+ L K G +V + R + L++ G++GQ +K + +
Sbjct: 13 LITVFGGSGFVGRYVVETLTKRGYRVRIAVRRPQKAYYMLQI-GEVGQTQMLKTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G + +F+ + ++ + E G + I +S L A
Sbjct: 72 SVARALLGADGAVFLPGSLAQANQSNFQKAQIDGTQNVSELTAEAG--IPLIYMSALVAD 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ K A E+ V + P A IMRP+ + G ED N A + PLFG G
Sbjct: 130 QHASCLYARIKFAGEQIVQNKYPQAIIMRPSVIFGPEDCFFNTLADLSRFLPIMPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV D+A V AL++ + GKIY+LGGP I T + E ++ I
Sbjct: 190 QSKLQPVYVGDIAEFVVRALEEH-VTFGKIYDLGGPQIMTFQNVLENIFKIIHR--KKTT 246
Query: 249 VPFPVAKAVAMPREI-LLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLG 303
+P P++ + + + ++ K+P P L D+I D +VS +N T + G
Sbjct: 247 LPIPLSAGLLIGSFLGIIGKLPL---VPTLLTADQIRFLQLDNVVSQAAIENGQTLEGAG 303
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
IVP + YL +R G
Sbjct: 304 IVPRAMAALLPSYLWRFRPHG 324
>gi|449684022|ref|XP_004210520.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like, partial [Hydra
magnipapillata]
Length = 163
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 92/135 (68%), Gaps = 1/135 (0%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
++G I TVFG TGFLGRYVV +LA+ G+Q+++P+RG +D+ R+++LMGDLGQI +N
Sbjct: 30 FNGSIVTVFGATGFLGRYVVNRLARRGTQLIIPYRGVDDEVRNIRLMGDLGQIKFFNYNL 89
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD ++ TM ++ VINL+G+ ++TRN++ D A +A AKE G+ RFI +S
Sbjct: 90 RDYESLLKTMTHSSTVINLVGKNFDTRNFTMSDCIVTGAADLAKAAKE-SGVKRFIHVSA 148
Query: 125 LGASSSSPSRVFSTK 139
LGA SSPS K
Sbjct: 149 LGAEGSSPSHYLRLK 163
>gi|332527835|ref|ZP_08403873.1| nucleoside-diphosphate-sugar epimerase [Rubrivivax benzoatilyticus
JA2]
gi|332112230|gb|EGJ12206.1| nucleoside-diphosphate-sugar epimerase [Rubrivivax benzoatilyticus
JA2]
Length = 318
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 157/310 (50%), Gaps = 20/310 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKM----GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
V G TGF+GR +V++L + G +V+VP R H ++ L + ++ N D+
Sbjct: 6 VLGGTGFVGRSLVERLVERNGGGGGRVIVPTRRLS----HGVVLRSLPTVELVEANVHDE 61
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
T+ +A+A+ VINLI + +R F+ V+ + RIA GG R + +S LG
Sbjct: 62 RTLARLVAQADAVINLIAILHGSRE-QFQRVHVELPRRIAHACAAAGG-RRVLHVSALGV 119
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ PS +K E A+ TI+RP+ + GTEDR+LN +A+ F PL G
Sbjct: 120 GAGGPSNYLRSKTEGEAALQSPGVALTIVRPSLIFGTEDRVLNVFAELQAMAPFVPLPGG 179
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G+ ++QPV++ DV A+ L DD ++G++YEL GP ++T+ E+ L + +
Sbjct: 180 GA-KMQPVWIEDVTTAIVRCL-DDKATIGQVYELAGPKVYTLSEIVRLAG----RWSGHE 233
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+ FP+ AV + +L++ +P L + D +++ + S + LGI P
Sbjct: 234 RPQFPLPDAVGRLQALLMEM----MPGTPLMSRDNLDSMRVANVASGKLPGLEALGITPT 289
Query: 308 KLKGYPTEYL 317
++ YL
Sbjct: 290 AMEAIAPAYL 299
>gi|357030912|ref|ZP_09092856.1| putative oxidoreductase [Gluconobacter morbifer G707]
gi|356415606|gb|EHH69249.1| putative oxidoreductase [Gluconobacter morbifer G707]
Length = 320
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 155/321 (48%), Gaps = 20/321 (6%)
Query: 1 MTYVYSGIIA---TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQI 57
M V+SG I V G GF+GR +V +L G V V R E D L G+ G++
Sbjct: 3 MQKVFSGNIGRTVAVLGGGGFIGRTLVSRLVARGHVVRVGGRHPERDQDLAHLPGE-GRV 61
Query: 58 VPMKFNPRDDNTIKATMAKANVVINLIG-REYETRNYSFEDVNHFMAERIAGIAKEHGGI 116
++ + D +++ A +NL+ +TR +N A+ A +A++ G+
Sbjct: 62 EFVRASVTDRESLRQLFIGAEAAVNLVSIMSPDTRE--LHRINVDGAQCTAQMAQQ-AGV 118
Query: 117 MRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFV 176
++ +S +GAS +SP+ +K AE+ V P A ++RP+ + G ED LN +A
Sbjct: 119 KHYVHMSAIGASRTSPASYGRSKGWAEKVVRDVFPTAGLLRPSVVFGPEDSFLNMFALMA 178
Query: 177 KKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
K P+FG T QPVYV DVA A L ++ + G+ E GGP++ T+ EL +
Sbjct: 179 KVSPVLPVFG-ARTHFQPVYVNDVADAAIRLLAEE--NAGRTVEAGGPEVLTMRELMTFI 235
Query: 237 YDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA 296
+ + VP PVA+ A +L+K+P L D++ D +V A
Sbjct: 236 LQVTGRHRLLLSVPMPVARLEAR----ILEKLP-----GHLLTRDQVTLLGQDNVVQPGA 286
Query: 297 LTFQDLGIVPHKLKGYPTEYL 317
T QDLGIVP L+ YL
Sbjct: 287 DTLQDLGIVPAALRKVAPGYL 307
>gi|398352332|ref|YP_006397796.1| NAD-dependent epimerase/dehydratase [Sinorhizobium fredii USDA 257]
gi|390127658|gb|AFL51039.1| NAD-dependent epimerase/dehydratase [Sinorhizobium fredii USDA 257]
Length = 316
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 137/303 (45%), Gaps = 16/303 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
I TV G TGFLGR +V +L V R P K ++ + D +
Sbjct: 15 IVTVVGGTGFLGRRIVSRLLDRA----VDVRAVSRHPHKDKSASGKRPSQQIEADILDPS 70
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I A +A + V+N + E +FE V H A A H G+ F+QIS +GA
Sbjct: 71 SIAAAVAGSRAVVNAVSLYVERGEQTFERV-HVEAAADLATASRHAGVEMFVQISGIGAD 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S S + EE V P A I+RPA M G +D + A+ V+ +PLFG+G
Sbjct: 130 PKSRSNYIRARGRGEEVVKAAFPGAVIVRPAVMAGPDDLFITTIARLVQILPIYPLFGEG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR+QPVYV DVA AV+ ++ I+E GP I++ EL + ++ V
Sbjct: 190 GTRLQPVYVEDVAEAVSRLALGQHSTAASIFECAGPRIYSYRELVRQIASQLKARIVLVP 249
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
VPF V +A E L P + ++++ D + + + ++LGI P
Sbjct: 250 VPFAVWGILATATEFL----------PAVSLTRNQVDLMRHDNVAAKDLPGLEELGIEPR 299
Query: 308 KLK 310
L+
Sbjct: 300 GLE 302
>gi|347761831|ref|YP_004869392.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Gluconacetobacter
xylinus NBRC 3288]
gi|347580801|dbj|BAK85022.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Gluconacetobacter
xylinus NBRC 3288]
Length = 314
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 151/298 (50%), Gaps = 13/298 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ATVFG +GF+GR VV +LA+ G V V R D +++ GD+GQ+VP+ + D+
Sbjct: 22 VATVFGGSGFVGRSVVGRLARAGYVVRVAGRTARDAA-CMRMQGDVGQVVPVVASITDEA 80
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
A + ++ INL+G +FE ++ A R+A +A G+ R I +S +GA+
Sbjct: 81 GCVAALEGCDLAINLVGILSPHGRTTFEAIHVEGAGRVARLAA-CAGVGRLIHVSAIGAA 139
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SPS +KA E V R +P A I+RP+ + G + +A+ + P+FG
Sbjct: 140 LDSPSAYARSKAEGECVVTRAMPEAVIIRPSLIFGVDGAFPAMFARMARLMPVMPVFG-A 198
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPV+V DVA + + + G ++E GGP I T+ ++ ++ + +
Sbjct: 199 ATRFQPVWVGDVAEGMLRIATGESVA-GAVFEFGGPKIMTMRQIVAWAA----QWSGHPR 253
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
F V + +A + +L+ +P + D++ D +V+ + T LGI P
Sbjct: 254 PLFEVPRWLANAQASVLEHLPGR-----MLTRDQVRLLYVDNVVAPGSRTIAMLGITP 306
>gi|395780466|ref|ZP_10460928.1| hypothetical protein MCW_01015 [Bartonella washoensis 085-0475]
gi|395418812|gb|EJF85129.1| hypothetical protein MCW_01015 [Bartonella washoensis 085-0475]
Length = 332
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 151/320 (47%), Gaps = 12/320 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R + L++ G++GQ +K + +
Sbjct: 13 LITVFGGSGFVGRHVVEALTKRGYRVRIAVRYPQKAYYMLQI-GEVGQTQMLKTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I + A+ + L G + +F+ + A+ ++ + E G + I +S L A+
Sbjct: 72 SIARALLGADGAVFLAGSLTQANQSNFQKIQTDGAQNVSELTAEAG--IPLIYMSALVAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ K+ +E+ + + P A IMRP+ + G ED N A PLFG G
Sbjct: 130 QNASFLYARVKSMSEKIIQDKHPQAIIMRPSVIFGPEDCFFNTLANLSCFLPIIPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV D+A V AL+ S GKIY+LGGP I T + E + I +V
Sbjct: 190 QSKLQPVYVGDIAEFVVRALEGQVIS-GKIYDLGGPQIITFQNVLENILKIIHRKKIFVS 248
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLGI 304
+P + L FPL P L D+I D I+S +N T + GI
Sbjct: 249 MPLSAGLLIG---SFLGAIGKFPL-MPTLITADQIRFLQMDNIISQEAIENGYTLEGAGI 304
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + YL +R G
Sbjct: 305 TPKAMAALLPSYLWRFRPQG 324
>gi|296115077|ref|ZP_06833719.1| NADH dehydrogenase (ubiquinone) [Gluconacetobacter hansenii ATCC
23769]
gi|295978414|gb|EFG85150.1| NADH dehydrogenase (ubiquinone) [Gluconacetobacter hansenii ATCC
23769]
Length = 321
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 160/327 (48%), Gaps = 25/327 (7%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ATVFG TGF+GRYVV +LA+ G V V R D ++L GD+GQ+VP+ + ++
Sbjct: 6 VATVFGGTGFVGRYVVARLARDGYVVRVASR-RPDRAAGMRLFGDVGQVVPLYASVLEER 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ A + +++V+NL+G R+ F V+ A R+A + G+ + +S +GA
Sbjct: 65 SSVAAIEGSDLVVNLVGILAPGRHAGFTAVHVDAAARVARLCAS-AGVGALVHMSAIGAD 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S +K E V R + A I+RP+ + G ED N +A + P++G G
Sbjct: 124 PDGISDYGRSKGRGEVEVQRHMAEAVIVRPSIIFGAEDHFTNMFAAMARYLPVMPVYG-G 182
Query: 189 STRIQPVYVVDVAAAVTAALKD--------DGTS-----MGKIYELGGPDIFTVHELAEL 235
TR QPV+V DVA A+ + +G+S G I+ELGGP ++ + ++
Sbjct: 183 MTRFQPVHVADVAEAIRRIARGLGRGAGVVEGSSAEDIFAGSIFELGGPRVWRMQDMVRW 242
Query: 236 MYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295
+ +R H +V F V +A + L+ +P + D+++ D +V+
Sbjct: 243 I---MRAAGHPRRV-FAVPPWLARIQASCLEHLPGR-----MLTRDQLSMLYVDNVVAPG 293
Query: 296 ALTFQDLGIVPHKLKGYPTEYLIWYRK 322
LGI P L+ +YL +R
Sbjct: 294 MRGLAHLGISPLSLEIAVPQYLARFRS 320
>gi|393724242|ref|ZP_10344169.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Sphingomonas sp.
PAMC 26605]
Length = 316
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 150/325 (46%), Gaps = 30/325 (9%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPR 65
+ T+ G GFLGRYV Q L G++V R + DPR LK +G LGQ +
Sbjct: 5 LVTLIGGGGFLGRYVAQALLDSGARV----RIAQRDPRQAFFLKPLGGLGQTQFAVADIT 60
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+I+ +A ++ V+NL+G + F+ + RI A G+ + +S +
Sbjct: 61 KPESIRRAVAGSDAVVNLVG----ILSGDFKKI-QVDGARIVAEAAAAAGVGALVHLSAI 115
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA +SPS +K E AV P ATI+RP+ + G ED+ +N++A V PL
Sbjct: 116 GADPASPSAYGRSKGEGEAAVRAAFPSATILRPSIVFGREDQFVNRFAAMVATAASMPLV 175
Query: 186 G-----DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
T+ QPVYV DVA AV AAL + GK ELGGPDI ++ L +
Sbjct: 176 HVVPVLRAGTKFQPVYVGDVADAVMAALAHPELAAGKTLELGGPDILSMGALVRWIAKAT 235
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS-DNALTF 299
PH V++P + A+A L P D+ D +VS N L
Sbjct: 236 NRTPHIVELPDAIGGAIAA--AGFLPGAP--------ITQDQWKMLAIDNVVSATNGLEL 285
Query: 300 QDLGIVPHKLKGYPTEYLIWYRKGG 324
LGI P L +L+ YRKGG
Sbjct: 286 --LGITPTPLDAVAPGWLVRYRKGG 308
>gi|73666668|ref|YP_302684.1| NADH-ubiquinone oxidoreductase, putativ [Ehrlichia canis str. Jake]
gi|72393809|gb|AAZ68086.1| NADH-ubiquinone oxidoreductase, putativ [Ehrlichia canis str. Jake]
Length = 320
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 129/261 (49%), Gaps = 4/261 (1%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG +GF+GRY+V+ A+ G ++ F + + LKL G+LGQI + + + I+
Sbjct: 8 IFGGSGFIGRYLVKYFAENG-YIIKIFTRYPEKAKQLKLCGNLGQIEVISGDVTNVQEIE 66
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+ +VV+NL+G Y T+N +F D++ AE IA AK + + S +G
Sbjct: 67 NNIFGCHVVVNLLGTLYSTKNSTFYDIHAKAAENIAKAAKS-CDVELMVHFSAMGIDEVQ 125
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S +K E V P A I+RP + G EDR NK+A+ F P+ G G
Sbjct: 126 QSHYARSKLIGENLVKLAFPNAVIIRPNLVFGAEDRFFNKFAKLTMISPFLPVIGGGRAV 185
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
QP+YV D+A V + + T K+Y + GP ++ EL + I+ + +PF
Sbjct: 186 FQPIYVDDLAKFVFYIVNNAVTD--KLYNVCGPRTYSFKELLNFILSIIKRKNILINIPF 243
Query: 252 PVAKAVAMPREILLKKVPFPL 272
VA +A E+ + + F L
Sbjct: 244 SVADILACVCELKIMSIFFKL 264
>gi|221107851|ref|XP_002155644.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like, partial [Hydra
magnipapillata]
Length = 144
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 92/145 (63%), Gaps = 1/145 (0%)
Query: 29 KMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREY 88
+ G+Q+++P+RG +D+ R+++LMGDLGQI +N RD ++ TM ++ VINL+G+ +
Sbjct: 1 RRGTQLIIPYRGVDDEVRNIRLMGDLGQIKFFNYNLRDYESLLKTMTHSSTVINLVGKNF 60
Query: 89 ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLR 148
+TRN++ D A +A AKE G+ RFI +S LGA SSPS K+ +E V
Sbjct: 61 DTRNFTMSDCIVTGAADLAKAAKE-SGVKRFIHVSALGAEGSSPSHYLRLKSRSERCVSD 119
Query: 149 ELPWATIMRPAAMIGTEDRLLNKWA 173
P ATIMRPA M G ED N++A
Sbjct: 120 AFPGATIMRPAPMYGDEDSYFNRYA 144
>gi|340779488|ref|ZP_08699431.1| NADH dehydrogenase (ubiquinone) [Acetobacter aceti NBRC 14818]
Length = 297
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 20/303 (6%)
Query: 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
ATVFG GFLG+YVV++LA G + V R D L+ +GD+GQ+VP ++++
Sbjct: 7 ATVFGGAGFLGKYVVRKLAADGYAIRVACRRT-DLANDLRQLGDVGQVVPFYAPVQNEDA 65
Query: 70 IKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
+ +++A+VV+NL + VN G+ F+ +S +GASS
Sbjct: 66 VAEVVSEASVVVNLAAILGAPSGAALNAVN-VEGAARVARLAAAAGVQTFVHMSAIGASS 124
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF-FPLFGDG 188
+SPS ++AA EE V R P ATI+R + + G ED LN + F P++G
Sbjct: 125 TSPSAYGRSRAAGEEGVTRHFPPATIVRASVLFGPEDHFLNMLGGVARYTPFVMPVYG-A 183
Query: 189 STRIQPVYVVDVAAAVTA---ALKDDGTSMGKIYELGGPDIFTVHELAE-LMYDTIREYP 244
ST++QPVYV DVA + A ++ ++ + ELGGPDI T+ +AE ++ T R P
Sbjct: 184 STKLQPVYVADVAEVIRVIIRAFDENPSTRSNLCELGGPDILTMRAIAERVLAMTGRNKP 243
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPG-LFNLDEINAYTSDTIVSDNALTFQDLG 303
+ +VP +A A E L PG + D++ T D +V N F+DLG
Sbjct: 244 IF-EVPSGLASLQAAVLEHL----------PGRMLTRDQLKMLTVDNVVDKNLPGFRDLG 292
Query: 304 IVP 306
+ P
Sbjct: 293 MAP 295
>gi|198418945|ref|XP_002125647.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 alpha
subcomplex, 9, 39kDa [Ciona intestinalis]
Length = 424
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 132/251 (52%), Gaps = 13/251 (5%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQI-VPMKFN 63
+SG++ATVFG TGF+G VV LA +GS +++P+RG + + KLM DLGQ+ V FN
Sbjct: 46 FSGVVATVFGPTGFIGLSVVNHLAAIGSSLVLPYRGTFERVQRHKLMSDLGQMHVREMFN 105
Query: 64 PR-DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
D+ ++ + +NVV+NLIG R YS E+VN R+A + E R I +
Sbjct: 106 SNASDDRVRELIEHSNVVVNLIGSTKPYRFYSMEEVNVTWPTRLAQLVAEKNDGTRLIHL 165
Query: 123 S---CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ----F 175
S C + S + AE+ + P +TI+R +++ G D+ W
Sbjct: 166 SRLNCHSDEARKHSEILKQNFEAEQNLKEIYPGSTIVRCSSVHGKYDKFTTFWLSPRWVS 225
Query: 176 VKKFNFFPLFGDG--STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELA 233
+ PL +G ST IQPV V DVA V A L + G+ +E GPD FT++E
Sbjct: 226 LGMLGSQPLMYEGGESTIIQPVCVSDVAEGV-ARLARHPDAPGQTFEFVGPDRFTLNEFL 284
Query: 234 ELMYDTI-REY 243
E +Y+ + R+Y
Sbjct: 285 EYVYNCLGRDY 295
>gi|430762318|ref|YP_007218175.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430011942|gb|AGA34694.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 308
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 143/304 (47%), Gaps = 18/304 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
I TVFG TGFLG +V+++ G P R P G I N D+
Sbjct: 5 ITTVFGGTGFLGSRIVREIVASGR----PVRIAARHPVRPAWAGAGDAIELATANIHDET 60
Query: 69 TIKATMAKANVVINLIGREYETRNY-SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
++ + A +N + E + +FE V+ A R+A +A+E G+ R + IS +GA
Sbjct: 61 SVARALDGATAAVNAVSLYAEAGGHDTFEAVHVTGAGRMARLARE-AGVRRLVHISGIGA 119
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+SPS +A E++V P A I+RP+ + G +D L A+ + PLFG
Sbjct: 120 DVTSPSFYVRARARGEQSVRAAFPNAVIVRPSVLFGPQDAFLANLARLA-QLPVIPLFGR 178
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPHY 246
G TR+QPV+V DVA AV A L ++ELGG ++ E+ E + D R
Sbjct: 179 GDTRLQPVFVDDVAQAV-ARLTAAADPAASLFELGGARVYRYREIVEQVLDHCGRRRRLL 237
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VPF + + +A + LP P L D++ D +V TF DLGI P
Sbjct: 238 MPVPFLLWRTLA--------GLTMFLPNPPLTR-DQVLLMQKDNVVHPGTATFADLGIAP 288
Query: 307 HKLK 310
H L+
Sbjct: 289 HSLE 292
>gi|297183462|gb|ADI19593.1| predicted nucleoside-diphosphate-sugar epimerases [uncultured SAR11
cluster bacterium HF0770_37D02]
Length = 291
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 140/278 (50%), Gaps = 12/278 (4%)
Query: 47 HLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERI 106
+LK +G+ GQI + N + +K + ++VINL+G YETR F ++ +
Sbjct: 23 YLKPLGNPGQIELFRTNIFNSEDVKQVIKNCDLVINLVGVLYETRKQKFNQIHVQFPNLL 82
Query: 107 AGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTED 166
+ + E G + + + +S LG S+ +K E+ + + I+RP+ + G ED
Sbjct: 83 SELCNEFG-VKKLVHVSALGVKEGHTSQYMQSKLQGEKNIQNIFKKSIILRPSVIFGPED 141
Query: 167 RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDI 226
+ N +A + PL G G T+ +PVYV DVA A+ +L+ D S IYELGG +
Sbjct: 142 KFFNTFATIAQFSPALPLIGGGKTQFEPVYVGDVAVAIVKSLELD-NSEPNIYELGGAN- 199
Query: 227 FTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAY 286
++ EL +++ I++ + +PF +AK + L+ +P PL P D++
Sbjct: 200 YSFRELMQILLSEIKKKRFLIPIPFGMAKF----QSYFLQMMPTPLLTP-----DQVEML 250
Query: 287 TSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
D +VS + T ++L I ++ ++Y+ +R GG
Sbjct: 251 KYDNVVSGDHKTLKNLKIKSTTIQSILSKYIYRFRTGG 288
>gi|423711939|ref|ZP_17686244.1| hypothetical protein MCQ_00808 [Bartonella washoensis Sb944nv]
gi|395412787|gb|EJF79267.1| hypothetical protein MCQ_00808 [Bartonella washoensis Sb944nv]
Length = 332
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 151/320 (47%), Gaps = 12/320 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R + L++ G++GQ +K + +
Sbjct: 13 LITVFGGSGFVGRHVVEALTKRGYRVRIAVRYPQKAYYMLQI-GEVGQTQMLKTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G + +F+ + A+ ++ +A E G + I +S L A+
Sbjct: 72 SVARALLGADGAVFLAGSLTQANQSNFQKIQTDGAQNVSELAAEAG--IPLIYMSALVAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ K+ +E+ + + P A IMRP+ + G ED N A PLFG G
Sbjct: 130 QNASFLYARVKSMSEKIIQDKHPQAIIMRPSVIFGPEDCFFNTLANLSCFLPIIPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV D+A V AL+ S GK Y+LGGP I T + E + I +V
Sbjct: 190 QSKLQPVYVGDIAEFVVRALEGQVIS-GKSYDLGGPQIITFQNVLENILKIIHRKKIFVS 248
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLGI 304
+P + L FPL P L D+I D I+S +N T + GI
Sbjct: 249 MPLSAGLLIG---SFLGAIGKFPL-MPTLITADQIRFLQMDNIISQEAIENGYTLEGAGI 304
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + YL +R G
Sbjct: 305 TPKAMAALLPSYLWRFRPQG 324
>gi|383768397|ref|YP_005447460.1| oxidoreductase [Bradyrhizobium sp. S23321]
gi|381356518|dbj|BAL73348.1| oxidoreductase [Bradyrhizobium sp. S23321]
Length = 244
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 126/251 (50%), Gaps = 20/251 (7%)
Query: 80 VINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTK 139
+INL+G E SF+ V AE +A A R + +S +GA + SPS K
Sbjct: 1 MINLVGILAEGGAQSFDAVQAKGAETVAKAAAAI--GARMVHVSAIGADAESPSAYARAK 58
Query: 140 AAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVD 199
AA E+AV+ +P ATI RP+ + G ED+ N++A + PL G G T++QPVYV D
Sbjct: 59 AAGEQAVIAAVPSATIFRPSVVFGPEDQFTNRFAALARMSPVMPLIG-GETKMQPVYVGD 117
Query: 200 VAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAM 259
VA A+ A+ D G YELGGP++ T+ E+ E + + P V +PF +A+
Sbjct: 118 VATAIADAV-DGKAKAGATYELGGPEVLTMREIIEAILEITDRKPMLVPLPFGLAR---- 172
Query: 260 PREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDLGIVPHKLKGYP 313
K F PG+ L D++ D +VS+ A LT + LGI L+
Sbjct: 173 ------FKAAFLQFAPGMLKLTPDQVTLLQRDNVVSEAAKAAGLTLEGLGIAADSLEAIA 226
Query: 314 TEYLIWYRKGG 324
+YL +R G
Sbjct: 227 PQYLWRFRPQG 237
>gi|404252338|ref|ZP_10956306.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingomonas
sp. PAMC 26621]
Length = 311
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 146/323 (45%), Gaps = 31/323 (9%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPR 65
+ T+ G GFLGRYV Q L + G++V R + DP LK G LGQ + +
Sbjct: 5 LVTLIGGGGFLGRYVAQALLERGARV----RIAQRDPHQAFFLKTQGGLGQTQFVAVDIT 60
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+I +A A+ V+NL+G + F+ + RI A G+ + +S +
Sbjct: 61 KPESIARAVAGADAVVNLVG----ILSGDFQKI-QVDGARIVAEAAARAGVETLVHMSAI 115
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA S+S S +K E AV P ATI+RP+ + G ED+ LN++A + P+
Sbjct: 116 GADSASESAYGRSKGDGEAAVRAAFPAATILRPSIVFGREDQFLNRFAAMIGSAPIVPVL 175
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G T+ QPVYV DVA AV AL + + GK +ELGGPD T+ L + T
Sbjct: 176 RTG-TKFQPVYVGDVAQAVVKALDEPAIAAGKTFELGGPDTITMGALVRWIAKTTGHKRR 234
Query: 246 YVKVPFPVAKAVA----MPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
+ +P + A+A +P + K D+ D +V+
Sbjct: 235 IIDLPDSIGAAIAGFGFLPGAPITK--------------DQWKMLAHDNVVAAGTPGLDA 280
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
I P L +L+ YRKGG
Sbjct: 281 FSITPTPLDAVAPAWLVRYRKGG 303
>gi|121606355|ref|YP_983684.1| NAD-dependent epimerase/dehydratase [Polaromonas naphthalenivorans
CJ2]
gi|120595324|gb|ABM38763.1| NAD-dependent epimerase/dehydratase [Polaromonas naphthalenivorans
CJ2]
Length = 318
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 151/310 (48%), Gaps = 20/310 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG TGF+G V ++L ++ +V V R D+ RHL L + + + D +
Sbjct: 6 IFGGTGFVGTQVCEKLNRLQCRVTVATRR-SDNARHLL---PLPLVDVAEIDLHDSAALA 61
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
A +A + V+NLI + + + +F+ V H A G+ R I IS LGAS S
Sbjct: 62 ALVAGHDAVVNLIAILHGSED-AFQKV-HVQWPLTLVRACRAAGVRRIIHISALGASMDS 119
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
SR +KA E A+L T++RP+ M G +D+ LN +A + F PL G R
Sbjct: 120 ASRYQRSKARGEAALLGSGLDVTVLRPSVMFGADDKFLNTFASLQQVFPVIPLAGS-RAR 178
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM--YDTIREYPHYVKV 249
QPV+V DVA AV L+DD T +G++YE GP +FT+ EL +L Y I H
Sbjct: 179 FQPVWVGDVADAVVRCLQDDAT-IGEVYEACGPQVFTLKELVQLAGRYAGIH---HGQGR 234
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPG--LFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
P +A+P + + F PG + + D ++A +D + + Q LGI P
Sbjct: 235 PV-----IALPDALARVQAFFMELAPGDPVLSRDNLDAMKTDNVATGKLPGLQALGITPA 289
Query: 308 KLKGYPTEYL 317
L+ YL
Sbjct: 290 SLEAIGPTYL 299
>gi|403356400|gb|EJY77793.1| NADH:ubiquinone oxidoreductase 39 kDa subunit [Oxytricha trifallax]
Length = 392
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 132/256 (51%), Gaps = 13/256 (5%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC----EDDPRHLKLMGDLGQIVPMK 61
SGI ATVFG T LG V L +MGSQ + P+R ++ + LK DLG +K
Sbjct: 55 SGIQATVFGGTSSLGSVVGGMLTRMGSQNIYPYRNSATLWDNRYKELKTTADLGNKAYIK 114
Query: 62 FNP-RDDNTIKATMAKANVVINLIGRE-YETRNYSFEDVNHFMAERIAGIAKEHGGIMRF 119
N ++ I T+ +NVVI+ IG + R+ FED N + IA K + RF
Sbjct: 115 LNDFTNEKEIAYTLKDSNVVISCIGSHVFTKRDKDFEDSNIRVPMAIAKAVKNSDKVKRF 174
Query: 120 IQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPA---AMIGTEDRLLNKWAQFV 176
I +S GA +S SR TK E+ V P TI+RP ++ + + KW +
Sbjct: 175 IYVSAAGADPNSHSRRLRTKWIGEQEVKEIYPDVTIIRPTYIFNLLHSNTTIAGKWGMQL 234
Query: 177 KKFNFFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
K FN +G + ++QPV+V DVA A+ LK + T +G+ Y+LGGP+I T E+ E
Sbjct: 235 KMFNRMNWLCEGMNGQVQPVFVNDVALAMLNCLKMEET-IGQTYDLGGPNILTYEEIYEQ 293
Query: 236 MYDT--IREYPHYVKV 249
++ ++ Y VK+
Sbjct: 294 FFNQTGVKPYTAVVKL 309
>gi|395490618|ref|ZP_10422197.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingomonas
sp. PAMC 26617]
Length = 311
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 146/323 (45%), Gaps = 31/323 (9%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPR 65
+ T+ G GFLGRYV Q L + G++V + R DP LK G LGQ + +
Sbjct: 5 LVTLIGGGGFLGRYVAQALLERGARVRIAQR----DPHQAFFLKTQGGLGQTQFVAVDIT 60
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+I +A A+ V+NL+G + F+ + RI A G+ + +S +
Sbjct: 61 KPESIARAVAGADAVVNLVG----ILSGDFQKI-QVDGARIVAEAAARAGVESLVHMSAI 115
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA S+S S +K E AV P ATI+RP+ + G ED+ LN++A + P+
Sbjct: 116 GADSASESAYGRSKGDGEAAVRAAFPAATILRPSIVFGREDQFLNRFAAMIGSAPIVPVL 175
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G T+ QPVYV DVA AV AL + + GK +ELGGPD T+ L + T
Sbjct: 176 RTG-TKFQPVYVGDVAQAVVKALDEPAIAAGKTFELGGPDTITMGALVRWIAKTTGHKRR 234
Query: 246 YVKVPFPVAKAVA----MPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
+ +P + A+A +P + K D+ D +V+
Sbjct: 235 IIDLPDSIGAAIAGFGFLPGAPITK--------------DQWKMLAHDNVVAAGTPGLDA 280
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
I P L +L+ YRKGG
Sbjct: 281 FDITPTPLDAVAPAWLVRYRKGG 303
>gi|383756349|ref|YP_005435334.1| NADH-ubiquinone oxidoreductase [Rubrivivax gelatinosus IL144]
gi|381377018|dbj|BAL93835.1| NADH-ubiquinone oxidoreductase, putative [Rubrivivax gelatinosus
IL144]
Length = 318
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 154/310 (49%), Gaps = 20/310 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKM----GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
V G TGF+GR +V++L + G +V+VP R H + L + ++ + D+
Sbjct: 6 VLGGTGFVGRSLVERLVERNGGGGGRVIVPTRRIS----HGTALRSLPTVELVEADVHDE 61
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
T+ + +A+ VINLI + +R F+ V+ + R+A + GG R + +S LG
Sbjct: 62 RTLARLVGQADAVINLIAVLHGSR-AQFQRVHVELPRRLAHVCAAAGG-RRVVHVSALGV 119
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ PS +K E A+ TI+RP+ + GTEDR+LN +A+ F PL G
Sbjct: 120 GAGGPSNYLRSKTEGEAALQSPGVALTIVRPSLIFGTEDRVLNVFAELQAAAPFVPLPG- 178
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G ++QPV++ DV A+ L DD T++G++YEL GP ++T+ E+ L + +
Sbjct: 179 GDAKMQPVWIEDVTTAIVRCL-DDNTTIGQVYELAGPKVYTLSEIVRLAG----RWSGHE 233
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+ P+ AV + +L++ +P L + D +++ + S LGI P
Sbjct: 234 RRQIPLPDAVGRLQAMLMEA----MPGTPLMSRDNLDSMRVPNVASGKLPGLHALGIEPT 289
Query: 308 KLKGYPTEYL 317
++ YL
Sbjct: 290 AMEAVAPGYL 299
>gi|254796755|ref|YP_003081591.1| NADH-ubiquinone oxidoreductase [Neorickettsia risticii str.
Illinois]
gi|254590000|gb|ACT69362.1| NADH-ubiquinone oxidoreductase family protein [Neorickettsia
risticii str. Illinois]
Length = 311
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 132/261 (50%), Gaps = 12/261 (4%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
TVFG GF+G YVV++L K G QV V + LKL G+LGQI + + RD I
Sbjct: 5 TVFGGGGFIGSYVVRELVKSGYQVTV-VSNSLSCAKKLKLSGNLGQISVVHGDIRDPGDI 63
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS----CLG 126
+ + +VIN++G ET + SF+ +NH ++A IA E+ G+ RFI S C G
Sbjct: 64 VKGIGNSEIVINMVGVLRETSSTSFDAINHLACAQVAQIAAEN-GVRRFIHFSALLGCKG 122
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A+ S++ E+AV P + I+RP + G ED +N + + +K L
Sbjct: 123 ATKYGRSKI-----NGEKAVRSAFPESIIIRPGVVFGEEDNFINLFVKLGRKLRILLLPA 177
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ IQPVYV D+A V L+++ T G IY + G +T+ E+ L+ +
Sbjct: 178 CKTASIQPVYVGDIAFLVAKILQNE-TLKGGIYPVVGSKRYTLSEICSLISRLLDITVIC 236
Query: 247 VKVPFPVAKAVAMPREILLKK 267
+ +P+ +A A E L K
Sbjct: 237 LPIPYWMALCEAALLECFLLK 257
>gi|163867338|ref|YP_001608532.1| NADH-ubiquinone oxidoreductase [Bartonella tribocorum CIP 105476]
gi|161016979|emb|CAK00537.1| NADH-ubiquinone oxidoreductase [Bartonella tribocorum CIP 105476]
Length = 332
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 148/322 (45%), Gaps = 16/322 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R C ++ G++GQ +K + +
Sbjct: 13 LITVFGGSGFVGRHVVENLTKRGYRVRIAVR-CPQKAYYMLQTGEVGQTQMLKTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G + +F+ +A + E G + I +S L A+
Sbjct: 72 SVVRALLGADAAVFLPGSLKQANQSNFKSTQIDGTYNVAELTAEAG--IPLIYMSTLVAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ K E+ + + P A IMRP+ + G ED N A + PLFG G
Sbjct: 130 ENASCLYARVKFMGEQIIYNKHPQAIIMRPSVIFGPEDCFFNTLADLSRFLPIMPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV DVA + AL D + GK Y+LGGP I T E + I +
Sbjct: 190 QSKLQPVYVGDVAEFIARAL-DGQVAWGKNYDLGGPQIITFQNAVENILKIIHRKKTILS 248
Query: 249 VPFPVAKAVAMPREIL--LKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDL 302
+P + IL + K+PF P L ++I D IVS +N T + +
Sbjct: 249 IPLSAGLLIG---GILGTIGKLPFI---PTLVTANQIRFLQIDNIVSQEAIENGHTLEGI 302
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
G+ P + + YL +R G
Sbjct: 303 GVTPRAMAAFLPSYLWRFRPHG 324
>gi|296536317|ref|ZP_06898428.1| NADH dehydrogenase (ubiquinone) [Roseomonas cervicalis ATCC 49957]
gi|296263352|gb|EFH09866.1| NADH dehydrogenase (ubiquinone) [Roseomonas cervicalis ATCC 49957]
Length = 315
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 163/318 (51%), Gaps = 13/318 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+A +FG TGF+GR++V +LA++ Q+ + R E R L G LGQ+ P+ D+
Sbjct: 6 VAVLFGGTGFIGRHLVPRLARLDYQLRIVTRNPEAV-RPLATQGQLGQVEPVSLRLSDEA 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ A++V+NL+G E R F+ + + RI A G + R +Q+S +GA
Sbjct: 65 AMARLFQGADLVVNLVGILAEKRKGDFQRLQGELPGRIGRAAAAAG-VGRVVQVSAIGAD 123
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++SPS +KAA E A+ P ATI+RP+ + G ED+ N++A + P+ G
Sbjct: 124 AASPSEYARSKAAGEAALRAAFPRATILRPSIVFGPEDQFFNRFAGMAQLLPVMPVVC-G 182
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPV+V DVAAA+ AA + G+ YELGGP + + EL + + V
Sbjct: 183 ATRFQPVFVGDVAAAIVAAATRP-EAPGQTYELGGPRVASFRELMGYVLEVTGRPKRLVP 241
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
+P + + A E+ LP P L D++ D +VS A T DLGI P
Sbjct: 242 LPDGLVRLQARLGEM--------LPNPPLTR-DQLAQLRRDNVVSAEAKTLADLGIAPTA 292
Query: 309 LKGYPTEYLIWYRKGGPK 326
++ YL +R GG +
Sbjct: 293 MEAVVPGYLARFRPGGAR 310
>gi|398803174|ref|ZP_10562280.1| putative nucleoside-diphosphate sugar epimerase [Polaromonas sp.
CF318]
gi|398097053|gb|EJL87365.1| putative nucleoside-diphosphate sugar epimerase [Polaromonas sp.
CF318]
Length = 318
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 161/311 (51%), Gaps = 22/311 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+GR+V ++LA++ +V V R + + RHL+++ L +V + + D +++
Sbjct: 6 LLGGTGFVGRHVCEKLARLQCRVTVVTRR-QANARHLQML-PLVDVV--EADAHDSSSLA 61
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+A + V+NL+ + ++ +F+ + + +A A E G+ R + IS LGAS S
Sbjct: 62 PLLAGHDAVVNLVAILHGSQ-AAFDKAHVQLPLELAR-ACEASGLRRIVHISALGASPGS 119
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
PS +KA E +L T++RP+ + G ED+ LN +A+ + F PL R
Sbjct: 120 PSMYQRSKARGEAVMLSTGLDVTVLRPSVIFGAEDKFLNTFARLQQIFPVIPLAA-ADAR 178
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM-----YDTIREYPHY 246
QPV+V DVA A+ L+D T +G+IYE+ GP++FT+ +L +L + + P
Sbjct: 179 FQPVWVEDVADAIVHCLRDADT-VGQIYEICGPEVFTLRQLVKLAGRYAGVNGGKGRP-V 236
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P P+A+ A E+ P + + D ++A SD + + Q LGI P
Sbjct: 237 IALPAPLARLQAGLMEL--------APGEPILSRDNLDAMASDNVATGKLPGLQALGIHP 288
Query: 307 HKLKGYPTEYL 317
L YL
Sbjct: 289 ASLDAIGPSYL 299
>gi|94496188|ref|ZP_01302766.1| NAD-dependent epimerase/dehydratase [Sphingomonas sp. SKA58]
gi|94424367|gb|EAT09390.1| NAD-dependent epimerase/dehydratase [Sphingomonas sp. SKA58]
Length = 308
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 148/316 (46%), Gaps = 20/316 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG GFLGR V Q L G++V + R + +K +G LGQ + + R
Sbjct: 5 LVTIFGGGGFLGRQVAQALMARGARVRIAQRDLASAIK-VKSLGALGQSQFVAADIRKPA 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
T++ +A ++VVINL+G ++ D H A + + +S +GA
Sbjct: 64 TVERAIAGSDVVINLVG--ILAGDF---DAFHHQGAAHVAQAAAAANVRALVHVSAIGAD 118
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ SPS +KAA E AV P ATI+RP+ + G +D+ LN++A + P+ G
Sbjct: 119 AESPSAYGRSKAAGEAAVKEAFPGATIIRPSIIFGPQDQFLNRFADLIASMPVIPVI-SG 177
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+T+ QPVYV DVA A+ A + G +YE+ GP I ++ E+ + I V
Sbjct: 178 ATKFQPVYVGDVADAIANAAERPDLHGGTVYEVAGPQILSMKEINSWIAKQIGRDKPIVD 237
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
VP VA +AM LP G D++ D + + A LG+
Sbjct: 238 VPGGVASLLAM------------LP-GGPITRDQLAMLGRDNVAAAGAPGLDALGVSATP 284
Query: 309 LKGYPTEYLIWYRKGG 324
+ ++L+ YR+ G
Sbjct: 285 MAAVADKWLVRYRRHG 300
>gi|442755023|gb|JAA69671.1| Putative nadh:ubiquinone oxidoreductase ndufa9/39kda subunit
[Ixodes ricinus]
Length = 292
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 120/202 (59%), Gaps = 12/202 (5%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFN 63
++G++ TVFG+ G LG ++ +L K+G+Q+++P+R CE + LKL GDLGQI FN
Sbjct: 63 FNGVVCTVFGSNGTLGTSLINRLGKIGTQLILPYR-CEFYFMQRLKLCGDLGQIHFQPFN 121
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
+D+ +I M +NVVINLIG++ ET N+ F +V+ A+ IA IA+E G+ + I S
Sbjct: 122 LKDELSIAKAMKYSNVVINLIGKDNETSNFPFSEVHVKGAQTIARIARES-GVQKLIHFS 180
Query: 124 CLGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFV 176
L A+ S S+ +++K E+ V E P A I RPA M EDR + + +
Sbjct: 181 ALNATESPRPIIKFGGSKFYASKWLGEQVVREEFPDAIIFRPADMYCHEDRFIRYYVSHI 240
Query: 177 KK-FNFFPLFGDGSTRI-QPVY 196
++ + PL+ G+ + QPV+
Sbjct: 241 RRNYVLMPLWNKGNGIVKQPVF 262
>gi|319404944|emb|CBI78546.1| NADH-ubiquinone oxidoreductase [Bartonella sp. AR 15-3]
Length = 338
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 18/323 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R C ++ +G++GQ +K + R+
Sbjct: 19 LITVFGGSGFVGRHVVETLTKRGYRVRIAVR-CPQKAYYMLQIGEVGQTQMLKTDVRNYA 77
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++K + A+ + L G +T +F+++ + ++ + + G + I +S L
Sbjct: 78 SVKHALFGADGAVFLPGSLAQTNKPNFQNIQVDGTKNVSELTAKAG--IPLIYMSTLITD 135
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ TKA +E+ V A IMR + + G ED N A + PLFG G
Sbjct: 136 ENASFSYARTKAISEQIVRNTHSQAVIMRSSVIFGPEDYFFNFLANLSRFMPIMPLFGGG 195
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
++QPVYV D+A V AL + +GK Y+LGGP + T E + I H K
Sbjct: 196 QNKLQPVYVGDIAKFVVYAL-EKRVILGKNYDLGGPKVLTFENTLEEILKVI----HRKK 250
Query: 249 VPFPVAKAVAMPREIL---LKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQD 301
FPV A+ L K+PF P L ++I D IVS DN T +
Sbjct: 251 RTFPVPLAIGFFIGGFFGALGKLPF---FPTLITANQIRFLQKDHIVSQEAKDNGYTLEG 307
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
+GI P + YL +R G
Sbjct: 308 VGITPKSITAILPSYLWRFRPQG 330
>gi|163747580|ref|ZP_02154929.1| NAD-dependent epimerase/dehydratase [Oceanibulbus indolifex HEL-45]
gi|161379177|gb|EDQ03597.1| NAD-dependent epimerase/dehydratase [Oceanibulbus indolifex HEL-45]
Length = 327
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 137/306 (44%), Gaps = 18/306 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
TVFG TGFLG VV+ L + G +V + R DP + D G+ + + T+
Sbjct: 8 TVFGGTGFLGSRVVRHLLRDGHRVRIAARHPTSDPE----LSDSGRAETARADLFKPKTL 63
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
A + A+ V+N E + ++ V+ A R+A +A GI F+Q+S +G+
Sbjct: 64 SAALNGADGVVNATSLYVEKGDLTYHAVHVDAAARLATLANR-AGIRSFVQLSGIGSDPD 122
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
+ + + E AV LP AT++RPA M G D LL + +PLFG G T
Sbjct: 123 AENSYIRARGRGETAVQAALPSATVIRPAVMFGDSDALLGTIQAVARSLPVYPLFGAGGT 182
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
+QP + DVA A+ L D S YEL G D T EL E + H + VP
Sbjct: 183 LLQPAWAQDVARAIGKLLVSD--SGAPCYELVGADTLTYCELVEEVARASGLRTHPIPVP 240
Query: 251 FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL-TFQDLGIVPHKL 309
FP+ K +A E L P + L +D V+ AL DL I P +
Sbjct: 241 FPIWKRLATIAE-RLPGAPLTRAQVALMQIDN---------VASGALPGLADLSITPKGI 290
Query: 310 KGYPTE 315
GY E
Sbjct: 291 IGYLHE 296
>gi|395788163|ref|ZP_10467739.1| hypothetical protein ME7_01074 [Bartonella birtlesii LL-WM9]
gi|395409945|gb|EJF76530.1| hypothetical protein ME7_01074 [Bartonella birtlesii LL-WM9]
Length = 332
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 14/321 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R C ++ +G++GQ +K + +
Sbjct: 13 LITVFGGSGFVGRHVVETLTKRGYRVRIAVR-CPHKAYYMLQIGEVGQTQMLKTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G + +F+ + ++ +A+E G + I +S L A+
Sbjct: 72 SVARALLGADGAVFLPGSLAQANQSNFQKTQINGTQNVSELAEEAG--IPLIYMSTLVAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ K A E+ V + P IMRP+ + G ED N A + PLFG G
Sbjct: 130 QHASCLYARVKFAGEQIVQNKHPQTIIMRPSVIFGAEDCFFNTLADLSRFLPIMPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV DVA V AL+ + GK Y+LGGP I T + + + I H K
Sbjct: 190 QSKLQPVYVNDVAEFVVRALEGK-VAAGKSYDLGGPQIITFQNILKNILKII----HRKK 244
Query: 249 VPFPVAKAVAMPREILLKKV-PFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
V P+ +V + + PL P L +I D IVS AL T + G
Sbjct: 245 VTLPMPLSVGLLIGGFFGAIGKLPLV-PTLVTKHQIRFLQMDNIVSQEALEKGYTLEGAG 303
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL +R G
Sbjct: 304 ITPRAMTALLPSYLWRFRPHG 324
>gi|88608530|ref|YP_506275.1| NADH-ubiquinone oxidoreductase family protein [Neorickettsia
sennetsu str. Miyayama]
gi|88600699|gb|ABD46167.1| NADH-ubiquinone oxidoreductase family protein [Neorickettsia
sennetsu str. Miyayama]
Length = 340
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 133/257 (51%), Gaps = 4/257 (1%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
TVFG +GF+G YVV++L K G +V V + LKL G+LGQI + + R + I
Sbjct: 34 TVFGGSGFIGSYVVRELVKSGYRVTVVANSL-SCAKKLKLSGNLGQISVVHGDIRYPDDI 92
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ + +VIN++G ET + SF +NH ++A IA E+ G+ RFI S L +
Sbjct: 93 VKGIGNSEIVINMVGVLRETSSASFGAINHLACAQVAQIAAEN-GVRRFIHFSAL-LGCN 150
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
++ +K EEAV P + I+RP + G ED +N + + +K L +
Sbjct: 151 GATKYGKSKLNGEEAVRSAFPESIIIRPGVVFGEEDNFINLFVKLGRKLRILLLPACKTA 210
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
IQPVYV D+A V L+++ T G+IY + G +T++E+ L+ + + +P
Sbjct: 211 SIQPVYVGDLALLVAKILQNE-TLKGEIYPVVGSKRYTLNEICSLISRLLGITVICLPIP 269
Query: 251 FPVAKAVAMPREILLKK 267
+ +A A E L K
Sbjct: 270 YWIALCEAALLECFLLK 286
>gi|58616759|ref|YP_195958.1| hypothetical protein ERGA_CDS_00320 [Ehrlichia ruminantium str.
Gardel]
gi|58416371|emb|CAI27484.1| Conserved hypothetical protein, similar to human and bovine
NADH-ubiquinone oxidoreductase 39 kDa subunit [Ehrlichia
ruminantium str. Gardel]
Length = 320
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 124/252 (49%), Gaps = 4/252 (1%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG +GF+G+Y+V+ + G + V F C + + L+L G LGQI + + ++ +
Sbjct: 8 IFGGSGFIGKYLVRYFSNAGYIIKV-FTKCPEKAKQLRLCGLLGQIEIVSGDINNNKELV 66
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
++ VINLIG Y T+ +F +V+ +AE IA IAK+ + + S +G +
Sbjct: 67 EHISGCYGVINLIGTLYNTKKTTFYNVHAHIAENIAKIAKQLN-VELMVHFSAMGIDNIC 125
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S +K E V P A I+RP + G ED+ NK+A+ + F P+ G G
Sbjct: 126 NSDYAKSKLIGERLVKESFPDAVIVRPNLVFGPEDKFFNKFARLLMILPFLPVVGGGKFV 185
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
QPVYV DVA V + D K+Y + GP ++ EL L+ +PF
Sbjct: 186 FQPVYVDDVAKLVFHII--DYKIKDKLYNVCGPSTYSFKELLNLILSITHRKSKLFNIPF 243
Query: 252 PVAKAVAMPREI 263
+A +A EI
Sbjct: 244 CLASILAFVFEI 255
>gi|398383791|ref|ZP_10541854.1| putative nucleoside-diphosphate sugar epimerase [Sphingobium sp.
AP49]
gi|397724236|gb|EJK84711.1| putative nucleoside-diphosphate sugar epimerase [Sphingobium sp.
AP49]
Length = 309
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 152/317 (47%), Gaps = 21/317 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG GFLGR V Q L G++V + R + +K +G+LGQ + + R +
Sbjct: 5 LVTIFGGGGFLGRQVAQALMARGARVRIAQRDLASAFK-VKALGNLGQTQFVAADIRKPD 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
T+ + +++VINL+G + F+ V H A G+ + +S +GA
Sbjct: 64 TVARALHGSDIVINLVG----ILSGDFDAVQH-EGAANVAKAAATAGVTALVHVSAIGAD 118
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SSPS +KAA E AVL P ATI+RP+ + G ED+ LN++A P+ G
Sbjct: 119 ASSPSAYGRSKAAGEAAVLAAFPTATIVRPSIIFGQEDQFLNRFAGVASSGPVVPVIG-A 177
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPHYV 247
+T+ QPVYV DVA A+ A + G GK +EL GP I ++ E+ + I R V
Sbjct: 178 NTKFQPVYVGDVAEAIANAAEQPGVHGGKTFELAGPQIMSMKEINAWVAKAIGRGGKPLV 237
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+VP A +A LL P D++ D + + A + LG+ P
Sbjct: 238 EVPGAFASLLA-----LLPGSP--------ITRDQLAMLGQDNVAAPGAPGLEALGVAPT 284
Query: 308 KLKGYPTEYLIWYRKGG 324
+ ++I YR G
Sbjct: 285 PMVAVAERWMIPYRSHG 301
>gi|319403517|emb|CBI77098.1| NADH-ubiquinone oxidoreductase [Bartonella rochalimae ATCC
BAA-1498]
Length = 338
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 153/321 (47%), Gaps = 14/321 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R C ++ +G++GQ +K + R+
Sbjct: 19 LITVFGGSGFVGRHVVEALTKRGYRVRIAVR-CPQKAYYMLQIGEVGQTQMLKTDVRNYT 77
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + + + L G +T +F+++ A+ ++ + + G + I +S L +
Sbjct: 78 SVEHALLGTDGAVFLPGSLAQTNKPNFQNIQVDGAKHVSELTAKAG--IPLIYMSTLISD 135
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ KA +E+ V A IMR + + G ED N A F + PLFG G
Sbjct: 136 ENASFSYARAKAISEQIVRNTHSQAVIMRSSVIFGPEDCFFNFLANFSRFMPIMPLFGGG 195
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV D+A V AL+ +GK Y+LGGP + T E + I
Sbjct: 196 QSKLQPVYVGDIAKFVVYALEKR-VVLGKNYDLGGPKVLTFQNTLEEILKVIHRKKR--T 252
Query: 249 VPFPVAKAVAMPREI-LLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLG 303
+P P+A + + L KVP P L ++I D IVS DN T + +G
Sbjct: 253 LPLPLAMGLFIGGFFGTLGKVPL---FPKLVTANQIRFLQKDHIVSQEAKDNGYTLEGVG 309
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL +R G
Sbjct: 310 ITPKSMAAILPSYLWRFRPQG 330
>gi|389614906|dbj|BAM20455.1| NADH-ubiquinone oxidoreductase 39 kda subunit, partial [Papilio
polytes]
Length = 305
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 116/205 (56%), Gaps = 11/205 (5%)
Query: 47 HLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERI 106
LK+ GDLGQ++ F+ RD+ +I + +NVVINL+GR+YET+N+S+ DV+ A R+
Sbjct: 3 RLKVAGDLGQVLFTPFDLRDEESIAKAVKYSNVVINLVGRDYETKNFSYTDVHVDGARRL 62
Query: 107 AGIAKEHGGIMRFIQISCLGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPA 159
A I +E + RFI +S L A S+ PS +K E AV E P ATI+R +
Sbjct: 63 ARICREM-CVERFIHLSYLNAESNPKPLLLKKPSMFKISKYLGECAVREEFPTATIIRAS 121
Query: 160 AMIGTEDRLLNKWAQFVKKF-NFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGK 217
+ G+EDR L A + N P++ +G I QPVYV DVA + A +D T +
Sbjct: 122 DIYGSEDRFLRSLATSWRSHGNLVPVYKNGKETIKQPVYVSDVAQGIVNAARDPDTRC-Q 180
Query: 218 IYELGGPDIFTVHELAELMYDTIRE 242
IY+ GP + + +L + Y +R+
Sbjct: 181 IYQAIGPKRYLLADLIDWFYKLMRK 205
>gi|388581588|gb|EIM21896.1| NAD(P)-binding protein [Wallemia sebi CBS 633.66]
Length = 313
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 127/247 (51%), Gaps = 17/247 (6%)
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++++ + ++ VIN +G +R +FE V H AE +A I +E+ + +QIS +
Sbjct: 21 DRDSLRGVLEGSDAVINTVGLLQASRK-TFEAVQHEGAENVARITRENNA--KLVQISAI 77
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA +SS TKA E+A L E P +I+RP+ + G D N++A K F P+F
Sbjct: 78 GADASSRLPYPRTKALGEQAALSECPDCSIVRPSLIFGPGDSFFNRFAWLAKYMPFLPVF 137
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSM------GKIYELGGPDIFTVHELAELMYDT 239
G G T QPVYV DVAAAV + GKI E GGP++FT ++ +L+ D
Sbjct: 138 GTGETLFQPVYVGDVAAAVALCAESRSDERIATRVNGKITEAGGPEVFTYRQIMQLVIDY 197
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFP----LPRPGLFNLDEINAYTSDTIVSDN 295
V +P+ +AK A +L+ +P P + R + L + N T N
Sbjct: 198 SGNKRPIVSIPWSIAKMQAF----VLENLPMPPVLSITRDQVEQLKKNNIVTPKHEQESN 253
Query: 296 ALTFQDL 302
A++F++L
Sbjct: 254 AISFKEL 260
>gi|68171582|ref|ZP_00544955.1| NADH-ubiquinone oxidoreductase, putative [Ehrlichia chaffeensis
str. Sapulpa]
gi|88658323|ref|YP_506894.1| putative NADH-ubiquinone oxidoreductase,-like protein [Ehrlichia
chaffeensis str. Arkansas]
gi|67998992|gb|EAM85670.1| NADH-ubiquinone oxidoreductase, putative [Ehrlichia chaffeensis
str. Sapulpa]
gi|88599780|gb|ABD45249.1| putative NADH-ubiquinone oxidoreductase, homolog [Ehrlichia
chaffeensis str. Arkansas]
Length = 320
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Query: 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
+FG +GF+GRY+V+ A+ G + + R E + LKL G+LGQ+ + N +
Sbjct: 6 VVMFGGSGFIGRYLVKYFAENGYVIRIVTRYPEK-AKQLKLCGNLGQVEVISGNVANSEE 64
Query: 70 IKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
+ + N+VINL+G Y + +F D++ AE IA AK + I S +G +
Sbjct: 65 VIEHIRDCNIVINLLGVLYSAKKSTFYDIHAKAAENIAKAAK-RCKVKLMIHFSAMGITE 123
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
+ S +K E V P A I+RP + G ED+ NK+AQ F F P+ G G
Sbjct: 124 TQKSDYAKSKLIGENLVKSAFPDAVIIRPNLVFGPEDKFFNKFAQLSMIFPFLPVIGGGR 183
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
QP+YV D+A V + +++ T K+Y + GP ++ EL + + + +
Sbjct: 184 AVFQPIYVDDLAKFVFSIVENSITD--KLYNVCGPCTYSFKELLSFILNVTNRKSKLINI 241
Query: 250 PFPVAKAVAMPREI 263
F V +A E+
Sbjct: 242 SFGVTNILAFFCEL 255
>gi|395791644|ref|ZP_10471100.1| hypothetical protein MEC_01091 [Bartonella alsatica IBS 382]
gi|395407947|gb|EJF74567.1| hypothetical protein MEC_01091 [Bartonella alsatica IBS 382]
Length = 332
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 150/322 (46%), Gaps = 16/322 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR++V+ L K G +V + R C ++ +G++GQ +K N +
Sbjct: 13 LITVFGGSGFVGRHIVETLTKRGYRVRIAVR-CPQKAYYMLQIGEVGQTQMLKTNIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G + +F+ + ++ + + G + I +S L A+
Sbjct: 72 SVARALYGADGAVFLPGSLAQANQSNFQSTQIDGVQNVSELTADAG--VPLIYMSTLVAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ K +E+ V P A IMRP+ + G ED N A FPLFG G
Sbjct: 130 KNASFLYARVKFMSEQIVQNTHPQAIIMRPSIIFGAEDCFFNTLANLACFLPIFPLFGSG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV D+A AL+ S GK Y+LGGP I T E + I+ +
Sbjct: 190 QSKLQPVYVGDIAEFAVRALEGQVIS-GKCYDLGGPQIITFKNALEKVLKIIQRKKIILS 248
Query: 249 VPFPVAKAVAMPREIL--LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDL 302
+P + L + K+PF P L ++I+ D IVS A+ T +
Sbjct: 249 MPLSIGLLFG---GFLGNVGKLPF---LPTLVTTNQIHFLQVDNIVSQEAIENKRTLEGA 302
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI+P + + YL +R G
Sbjct: 303 GIIPRAMAAFLPSYLWRFRPQG 324
>gi|384214410|ref|YP_005605573.1| oxidoreductase [Bradyrhizobium japonicum USDA 6]
gi|354953306|dbj|BAL05985.1| oxidoreductase [Bradyrhizobium japonicum USDA 6]
Length = 304
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 151/312 (48%), Gaps = 21/312 (6%)
Query: 19 LGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKAN 78
+GR VV+ L + +V V R E +L+ G +GQ+ ++ N R +++A M ++
Sbjct: 1 MGRNVVRALCRRDYRVRVAVRRPEL-AGYLQPSGRVGQVHIVQANLRYPASVEAAMRDSD 59
Query: 79 VVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFST 138
VVINL+G E+ +F+ V R + +S +GA + SPS
Sbjct: 60 VVINLVGILAESGAQTFDAVQ--AKGAETVAKAAAAAGARLVHVSAIGADAESPSHYARA 117
Query: 139 KAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVV 198
KAA E AVL +P ATI RP+ + G ED+ N++A + PL G+ TR+QPVYV
Sbjct: 118 KAAGEAAVLAAVPSATIFRPSVIFGPEDQFTNRFAALARMSPVLPLIGE-MTRMQPVYVG 176
Query: 199 DVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVA 258
DVA A+ A+ D G YELGGP++ T+ E+ E + P V + F +A+
Sbjct: 177 DVATAIADAV-DGKAKAGATYELGGPEVLTMREIIEAIVAIADRKPMLVPLSFSLAR--- 232
Query: 259 MPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDNA----LTFQDLGIVPHKLKGY 312
+ F PG L D++ D +VSD A LT + LGI L+
Sbjct: 233 -------FQANFLQFAPGALKLTPDQVTLLARDNVVSDAAKAAGLTLEGLGISADSLEAI 285
Query: 313 PTEYLIWYRKGG 324
+YL +R G
Sbjct: 286 APQYLWRFRAAG 297
>gi|117924284|ref|YP_864901.1| NAD-dependent epimerase/dehydratase [Magnetococcus marinus MC-1]
gi|117608040|gb|ABK43495.1| NAD-dependent epimerase/dehydratase [Magnetococcus marinus MC-1]
Length = 294
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 136/264 (51%), Gaps = 19/264 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVL-----VPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
+ G TGF+G+ ++QQL G ++ +P R + +++ GD+ +P
Sbjct: 4 ITGATGFVGQALIQQLVSEGHKIRALARHIPARHAPEGVQYVA--GDIQ--IP------- 52
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
++++ M VI+L+G E R+ SFE+++H + AK+ G+ RF+ +S LG
Sbjct: 53 -SSLQTAMEGVTCVIHLVGILAEQRHRSFEEIHHQGTLNVLQAAKQ-AGVKRFLHMSSLG 110
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
+++ +R +K AE AV TI RP+ + G D +N++A+ ++ P+ G
Sbjct: 111 TRANAVARYHQSKWQAECAVRESGLDYTIFRPSVIFGPGDNFVNQFARMIRFSPMVPILG 170
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
DG R+QP+ V DVA AL D T +G+ YELGGP T E+ E + D + +
Sbjct: 171 DGQNRMQPIAVGDVARCFAIALTDRQT-LGQTYELGGPQQLTFQEIMENILDALHKKRFK 229
Query: 247 VKVPFPVAKAVAMPREILLKKVPF 270
+++PF + K E+LL P
Sbjct: 230 LRLPFALLKLEGKIFEVLLSNPPL 253
>gi|359399815|ref|ZP_09192810.1| NADH dehydrogenase [Novosphingobium pentaromativorans US6-1]
gi|357598840|gb|EHJ60563.1| NADH dehydrogenase [Novosphingobium pentaromativorans US6-1]
Length = 373
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 156/325 (48%), Gaps = 20/325 (6%)
Query: 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMK 61
T +G I TV G +GF+GR++ Q+L G+++ + R + +K +G+LGQ+ +
Sbjct: 59 TNSLAGKIVTVLGGSGFVGRHLAQELLSRGARLRIASRNPQK-AYAIKPLGNLGQVQFAR 117
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFE-DVNHFMAERIAGIAKEHGGIMRFI 120
+ +++ A +A ++ V+NL+G +S D A + G F+
Sbjct: 118 VDVTRPDSLAAALAGSDAVVNLVG------AFSGNLDALQGKGAGAIAAAAKAAGASAFV 171
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
IS +G ++ S TKA EEAV E P ATI+RP+ + G +D + + + + F
Sbjct: 172 HISAIGGNADSDVDYARTKAEGEEAVRAEFPGATILRPSLLFGPDDNFVMMFGRLIGAFP 231
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
P+FG ++QP++V D A A+ AL + G GK YE+GGP++ T+ EL + +
Sbjct: 232 ALPVFGP-EAKLQPLFVDDAAEAIANALGNPGAHGGKTYEIGGPEVITMLELNQRIAKAE 290
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDNALTF 299
++ +P V++ +A L PG D+ + ++ S +
Sbjct: 291 GRSRSFIALPDSVSELIASATGWL----------PGAPITSDQFKLLKAGSVASGDLPGI 340
Query: 300 QDLGIVPHKLKGYPTEYLIWYRKGG 324
+LG+ P L + + +RK G
Sbjct: 341 AELGVSPRPLGLFLDRWATQFRKHG 365
>gi|381200625|ref|ZP_09907761.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
yanoikuyae XLDN2-5]
Length = 309
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 155/317 (48%), Gaps = 21/317 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG GFLGR V Q L G++V + R + + +K +G+LGQ + N R +
Sbjct: 5 LVTIFGGGGFLGRQVAQALMARGARVRIAQRDLANSVK-VKALGNLGQTQFVAANIRKPD 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
T+ + +++VINL+G + F+ V H A G+ + +S +GA
Sbjct: 64 TVARALHGSDIVINLVG----ILSGDFDAVQH-EGAANVAQAAAAAGVTALVHVSAIGAD 118
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++SPS +KAA E AVL P ATI+RP+ + G ED+ LN++A P+ G
Sbjct: 119 ANSPSAYGRSKAAGEAAVLAAFPTATILRPSIIFGQEDQFLNRFAGVASSGPVVPVIG-A 177
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPHYV 247
+T+ QPVYV DVA A+ A + G GK +EL GP + ++ E+ + I R V
Sbjct: 178 ATKFQPVYVGDVAEAIANAAQQPGVFGGKTFELAGPQVMSMKEINAWVAKAIGRGDKPLV 237
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+VP A +AM LP G D++ D + + A + LG+ P
Sbjct: 238 EVPGAFASLLAM------------LPG-GPITRDQLAMLGHDNVAAPGAPGLEALGVAPT 284
Query: 308 KLKGYPTEYLIWYRKGG 324
+ +++ YRK G
Sbjct: 285 PMAAVAERWMVPYRKHG 301
>gi|451940072|ref|YP_007460710.1| NADH-ubiquinone oxidoreductase [Bartonella australis Aust/NH1]
gi|451899459|gb|AGF73922.1| NADH-ubiquinone oxidoreductase [Bartonella australis Aust/NH1]
Length = 332
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 152/321 (47%), Gaps = 14/321 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GRYVV+ L K G +V + R ++ L++ G++GQ +K + +D
Sbjct: 13 LITVFGGSGFVGRYVVEALTKRGYRVRIAARRPQNAYYMLQI-GEVGQTQMLKTDVKDRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G + +F + +A +A E G + I S L A+
Sbjct: 72 SVARALLGADGAVFLPGSLVQANQPNFRTIQIDGVRNVAELAAEAG--ISLIYTSSLIAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S+ TK +E+ + + A IMRP+ + G EDR N A + PLFG G
Sbjct: 130 ESTSFPYAHTKFMSEKIIRDKHSQAIIMRPSVIFGPEDRFFNTLANLSRFLPIMPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
++QPVYV D+A V AL + GK Y+LGGP I TV E + I V
Sbjct: 190 QNKLQPVYVGDIAEFVVRALGGR-IAPGKSYDLGGPQIMTVQNALEDVLKIIHREKIIVH 248
Query: 249 VPFPVAKAVA-MPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDLG 303
+P + + + R I K+P P L ++I +D IVS A+ T + +G
Sbjct: 249 MPLFMGLFIGNLFRAI--GKLPM---LPTLITANQIRFLQADNIVSQEAIKNRCTLEGVG 303
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL +R G
Sbjct: 304 ITPRAMTVIVPSYLWRFRPHG 324
>gi|427409937|ref|ZP_18900139.1| hypothetical protein HMPREF9718_02613 [Sphingobium yanoikuyae ATCC
51230]
gi|425712070|gb|EKU75085.1| hypothetical protein HMPREF9718_02613 [Sphingobium yanoikuyae ATCC
51230]
Length = 309
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 155/317 (48%), Gaps = 21/317 (6%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG GFLGR V Q L G++V + R + + +K +G+LGQ + N R +
Sbjct: 5 LVTIFGGGGFLGRQVAQALMARGARVRIAQRDLANSVK-VKALGNLGQTQFVAANIRKPD 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
T+ + +++VINL+G + F+ V H A G+ + +S +GA
Sbjct: 64 TVARALHGSDIVINLVG----ILSGDFDAVQH-EGAANVAKAAAAAGVTALVHVSAIGAD 118
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++SPS +KAA E AVL P ATI+RP+ + G ED+ LN++A P+ G
Sbjct: 119 ANSPSAYGRSKAAGEAAVLAAFPNATIVRPSIIFGQEDQFLNRFAGVASSGPVVPVIG-A 177
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPHYV 247
+T+ QPVYV DVA A+ A + G GK +EL GP + ++ E+ + I R V
Sbjct: 178 ATKFQPVYVGDVAEAIANAAQQPGVFGGKTFELAGPQVMSMKEINAWVAKAIGRGDKPLV 237
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+VP A +AM LP G D++ D + + A + LG+ P
Sbjct: 238 EVPGAFASLLAM------------LPG-GPITRDQLAMLGQDNVAAPGAPGLEALGVAPT 284
Query: 308 KLKGYPTEYLIWYRKGG 324
+ +++ YRK G
Sbjct: 285 PMAAVAERWMVPYRKHG 301
>gi|241813409|ref|XP_002416494.1| NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit, putative
[Ixodes scapularis]
gi|215510958|gb|EEC20411.1| NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit, putative
[Ixodes scapularis]
Length = 370
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 120/208 (57%), Gaps = 12/208 (5%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFN 63
++G++ TVFG+ G LG ++ +L K+G+Q+++P+R CE + LKL GDLGQI FN
Sbjct: 63 FNGVVCTVFGSNGSLGTSLINRLGKIGTQLILPYR-CEFYFMQRLKLCGDLGQIHFQPFN 121
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
+D+ +I M +NVVINLIG++ ET N+ F +V+ A+ IA IA+E G+ + I S
Sbjct: 122 LKDELSIAKAMKYSNVVINLIGKDTETSNFPFSEVHVKGAQTIARIARES-GVQKLIHFS 180
Query: 124 CLGASSS-------SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFV 176
L A+ S S+ +++K E+ V E P A I RPA M EDR + + +
Sbjct: 181 ALNATESPRPIIKFGGSKFYASKWLGEQVVREEFPDAIIFRPADMYSHEDRFIRYYVSHI 240
Query: 177 KK-FNFFPLFGDGSTRI-QPVYVVDVAA 202
++ + PL+ G+ + QP + A
Sbjct: 241 RRNYVLMPLWIKGNGIVKQPFFAFGRAG 268
>gi|395778924|ref|ZP_10459435.1| hypothetical protein MCU_01136 [Bartonella elizabethae Re6043vi]
gi|423714772|ref|ZP_17688996.1| hypothetical protein MEE_00197 [Bartonella elizabethae F9251]
gi|395417099|gb|EJF83451.1| hypothetical protein MCU_01136 [Bartonella elizabethae Re6043vi]
gi|395430991|gb|EJF97019.1| hypothetical protein MEE_00197 [Bartonella elizabethae F9251]
Length = 332
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 146/322 (45%), Gaps = 16/322 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R C ++ +G++GQ +K + +
Sbjct: 13 LITVFGGSGFVGRHVVETLTKRGYRVRIAVR-CPQKAYYMLQIGEVGQTQMLKTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G + +F+ +A + E G + I +S L A
Sbjct: 72 SVARALLGADAAVFLPGSLKQANQSNFKSTQIDGTYNVAELTAEAG--IPLIYMSTLVAK 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ K E+ + + A I+RP+ + G ED N A + PLFG G
Sbjct: 130 ENASCLYARVKFMGEQIIHNKHSQAIIIRPSVIFGPEDCFFNTLADLSRFLPIMPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV DVA + AL D S GK Y+LGGP I T E + I +
Sbjct: 190 QSKLQPVYVGDVAEFIARAL-DGQVSWGKNYDLGGPQIITFQNALENILKIIHRKKMLLS 248
Query: 249 VPFPVAKAVAMPREIL--LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQDL 302
+P + IL + K+PF P L ++I D IVS AL T + +
Sbjct: 249 MPLSAGLLIG---GILGTIGKLPFV---PTLVTANQIRFLQMDNIVSQEALENGYTLEGV 302
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P + YL +R G
Sbjct: 303 GITPKAIAASLPSYLWRFRPHG 324
>gi|354594189|ref|ZP_09012232.1| hypothetical protein CIN_09280 [Commensalibacter intestini A911]
gi|353673300|gb|EHD14996.1| hypothetical protein CIN_09280 [Commensalibacter intestini A911]
Length = 323
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 150/315 (47%), Gaps = 17/315 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
+ATV G F+ YVV++L K G +V VP + L+ G++G I P+ +
Sbjct: 7 VATVIGNNKFVEGYVVERLVKAGYVVRVAVPQPALVNT---LRPFGNVGHISPLYCSVTQ 63
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
++T+ + A VV+NL + + N A+ IA I+ G+ + I S LG
Sbjct: 64 EHTVIRAIEGAEVVVNLSELSFGKNKTKLDIYNVKAAQNIARISAA-AGVKKLIHFSALG 122
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +S S +K E+AVL A I+R + + G ED+ LNK F P++
Sbjct: 123 AELNSRSAYLVSKKKGEDAVLEAFSSAVILRTSIVFGPEDQFLNKLGMIASYFPIMPVY- 181
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ +T++QPVYV DVA AV ++ T+ GKIYEL G + +T EL + + +R
Sbjct: 182 NVNTKLQPVYVGDVADAVMKVVQQPETA-GKIYELAGQEAYTNRELMTWLVEWLRTNNDI 240
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ + + A L+ +P L P L N+ E D+++S LGIVP
Sbjct: 241 SGLSPALIRLAAFS----LQFMPGALMTPALLNMMEY-----DSVLSQKENGLMALGIVP 291
Query: 307 HKLKGYPTEYLIWYR 321
L+ YL YR
Sbjct: 292 KTLEMIAPIYLYCYR 306
>gi|427815993|ref|ZP_18983057.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410566993|emb|CCN24563.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 303
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 144/293 (49%), Gaps = 24/293 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR++V +LA +VLVP R + R L++ L + ++ + DD +
Sbjct: 5 VIGGTGFIGRHLVARLAAQEHKVLVPTRR-YNKGRDLQV---LPTVTLIEADVHDDAELD 60
Query: 72 ATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
M + + V+NL+G + +R F + + ERIA A G+ R + +S LGA
Sbjct: 61 RLMHRCDAVVNLVGVLHGSRGRPYGAGFARAHVLLPERIAQ-ACVRNGVARMLHVSALGA 119
Query: 128 SSSSPSRVFSTKAAAEEAVLREL----PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
S PS +K E A+ R W T+ RP+ + G +D +A+ + F P
Sbjct: 120 DSGGPSMYLRSKGDGEAAIQRVFGATGGW-TLFRPSVVFGPDDNFTRMFARLARLFPVLP 178
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G +R+QPVYV DVA A+ AAL +G + GKIYEL GP ++T+ E+ L
Sbjct: 179 LAG-ARSRMQPVYVGDVADAMMAALA-NGHTAGKIYELCGPQVYTLGEIVRLCALWSGHP 236
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA 296
++P + + A+ E LP L + D +++ T D + S A
Sbjct: 237 RPVCEMPMALGRMQALLFEC--------LPGDPLVSRDNLDSLTRDNVASGAA 281
>gi|307731313|ref|YP_003908537.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003]
gi|307585848|gb|ADN59246.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003]
Length = 317
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 150/312 (48%), Gaps = 24/312 (7%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+G ++V L +MG +V + R + RHL L+ I ++ + D +
Sbjct: 7 AIIGGSGFIGSHLVNALVEMGKEVRIATRR-RYNARHLTLL----PIDVIETDVFDPVQL 61
Query: 71 KATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ A+ VINL+G + R F + + RI A E G+ R I +S LG
Sbjct: 62 ARFVEGADCVINLVGTLHGKRRTPYGPEFARAHVELPTRIVA-ACEGKGVHRLIHLSALG 120
Query: 127 ASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S+ PS +K E+AV L W T+ RP+ + G ED+ LNK+A + F PL
Sbjct: 121 ADSNGPSMYSRSKGDGEKAVHAANLAW-TVFRPSVVFGPEDQFLNKFAFLQRIFPVIPL- 178
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
R QPVYV DVA A+ L D S GK YELGGP ++T+ EL + D I +
Sbjct: 179 AMPDARFQPVYVGDVAKAIVNVLDLDAAS-GKTYELGGPSVYTLEELVKYCGDVIGRHAS 237
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+++P +A+ AM E+ P + D +++ D ++S +LG+
Sbjct: 238 IIRLPLALARMQAMTFEM--------APGEPVITRDNLDSMKHDNVLSHP--LAPELGLE 287
Query: 306 PHKLKGYPTEYL 317
P ++ YL
Sbjct: 288 PASIETIAPVYL 299
>gi|329904553|ref|ZP_08273859.1| NAD-dependent epimerase/dehydratase [Oxalobacteraceae bacterium
IMCC9480]
gi|327547913|gb|EGF32663.1| NAD-dependent epimerase/dehydratase [Oxalobacteraceae bacterium
IMCC9480]
Length = 325
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 156/332 (46%), Gaps = 40/332 (12%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM 60
MT +S ++ V G TGF+G ++V QL G V+VP R RHL ++ + +IV
Sbjct: 1 MTMHHSNVL--VLGGTGFVGSHLVAQLVAQGRHVIVPTRRA-IRARHLAVLPTV-EIVET 56
Query: 61 KFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEH------- 113
+ + + M + + VINL+G + VN A A+ H
Sbjct: 57 DIH--QEQALARLMGRTDAVINLVGVLHS------RPVNGGAASYGPDFARAHVELPIRI 108
Query: 114 ------GGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPW--ATIMRPAAMIGTE 165
G+ RF+ +S LGA ++PS +KAA E+A R P T+ RP+ + G +
Sbjct: 109 VAACGVAGVKRFLHMSALGADRNAPSMYLRSKAAGEDAA-RSHPAVATTVFRPSVVFGED 167
Query: 166 DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225
D LN +A + F PL G R QP+YV DVA A AL D+ ++GK+YELGGP+
Sbjct: 168 DAFLNMFAGMQRWFPVIPL-GGADARFQPIYVEDVAQAFVNAL-DNQHTVGKVYELGGPE 225
Query: 226 IFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINA 285
+FT+ EL +L + +P +A+ A+ E P + + D +++
Sbjct: 226 VFTLRELVQLAGRASGHPRPVIGLPPALARLQALVLEF--------APGGPVMSRDNLDS 277
Query: 286 YTSDTIVSDNALTFQDLGIVPHKLKGYPTEYL 317
+D ++ +LG+ P L+ YL
Sbjct: 278 MKTDNVM--RGPIAPELGVTPQALEAIAARYL 307
>gi|57238773|ref|YP_179909.1| NADH-ubiquinone oxidoreductase subunit [Ehrlichia ruminantium str.
Welgevonden]
gi|58578697|ref|YP_196909.1| hypothetical protein ERWE_CDS_00330 [Ehrlichia ruminantium str.
Welgevonden]
gi|57160852|emb|CAH57752.1| putative NADH-ubiquinone oxidoreductase subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58417323|emb|CAI26527.1| Conserved hypothetical protein, similar to human and bovine
NADH-ubiquinone oxidoreductase 39 kDa subunit [Ehrlichia
ruminantium str. Welgevonden]
Length = 320
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 4/252 (1%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG +GF+G+Y+V+ + G + V F C + + L+L G LGQI + + ++ +
Sbjct: 8 IFGGSGFIGKYLVRYFSNAGYIIKV-FTRCPEKAKQLRLCGLLGQIEIVSGDINNNKELV 66
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
++ VINLIG Y T+ +F +V+ +AE IA IAK+ + + S +G +
Sbjct: 67 EHISGCYGVINLIGTLYNTKKTTFYNVHAHVAENIAKIAKQLN-VELMVHFSAMGIDNIC 125
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S +K E V P A I+RP + G ED+ NK+A+ + F P+ G G
Sbjct: 126 NSDYAKSKLIGERLVKESFPDAVIVRPNLVFGPEDKFFNKFARLLMILPFLPVVGGGKFV 185
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
QPVYV DVA V + D K+Y + GP ++ EL L+ + F
Sbjct: 186 FQPVYVDDVAKLVFHII--DYKIKDKLYNVCGPSTYSFKELLNLILSITHRKSKLFNISF 243
Query: 252 PVAKAVAMPREI 263
+A +A EI
Sbjct: 244 CLASILAFVFEI 255
>gi|427825489|ref|ZP_18992551.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|410590754|emb|CCN05847.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 303
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 143/293 (48%), Gaps = 24/293 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR++V +LA +VLVP R + R L++ L + ++ + DD +
Sbjct: 5 VIGGTGFIGRHLVARLAAQEHKVLVPTRR-YNKGRDLQV---LPTVTLIEADVHDDAELD 60
Query: 72 ATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
M + + V+NL+G + R F + + ERIA A G+ R + +S LGA
Sbjct: 61 RLMHRCDAVVNLVGVLHGGRGRPYGAGFARAHVLLPERIA-QACVRNGVARMLHVSALGA 119
Query: 128 SSSSPSRVFSTKAAAEEAVLREL----PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
S PS +K E AV R W T+ RP+ + G +D +A+ + F P
Sbjct: 120 DSGGPSMYLRSKGDGEAAVQRVFGATGGW-TLFRPSVVFGPDDNFTRMFARLARLFPVLP 178
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G +R+QPVYV DVA A+ AAL +G + GKIYEL GP ++T+ E+ L
Sbjct: 179 LAG-ARSRMQPVYVGDVADAMMAALA-NGHTAGKIYELCGPQVYTLGEIVRLCALWSGHP 236
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA 296
++P + + A+ E LP L + D +++ T D + S A
Sbjct: 237 RPVCEMPMALGRMQALLFEC--------LPGDPLVSRDNLDSLTRDNVASGAA 281
>gi|332188275|ref|ZP_08390002.1| short chain dehydrogenase family protein [Sphingomonas sp. S17]
gi|332011671|gb|EGI53749.1| short chain dehydrogenase family protein [Sphingomonas sp. S17]
Length = 310
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 154/321 (47%), Gaps = 31/321 (9%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPR 65
+ T+ G GFLGRYV ++L + G++V V + DPR L+ G LGQ + +
Sbjct: 5 LVTLIGGGGFLGRYVARELMRDGTRVRV----AQRDPRQAYFLRTQGGLGQTQFVAADIA 60
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+T+ + A+ V+NL+G + + + H R A G+ +S +
Sbjct: 61 RPDTVARAVEGADAVVNLVG----VMGGNMQRI-HVDGARAVAEAARAAGVTALAHVSAI 115
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA ++ + +K E AV + P ATI+RP+ + G ED+ +N++A V P+
Sbjct: 116 GADANGQAAYARSKGEGETAVRQAFPNATILRPSIVFGREDQFVNRFAGMVSA-PVVPIL 174
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G + QPV+ DV A+ AAL+ G+ YELGGPD+ ++ EL + T+ P+
Sbjct: 175 RAG-VKFQPVFAGDVGEAIAAALRHPEAHGGRTYELGGPDVISMGELVRWIAQTLGRKPN 233
Query: 246 YVKVP-FPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
++++P F A LL ++P P+ + D+ D + + +LG
Sbjct: 234 FIELPDFAGA---------LLARLPGSPI------SWDQWLMLQQDNVAAAGTPGLAELG 278
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
+ P L EYL+ +RK G
Sbjct: 279 VTPEPLAAVAPEYLVRFRKAG 299
>gi|319406432|emb|CBI80072.1| NADH-ubiquinone oxidoreductase [Bartonella sp. 1-1C]
Length = 338
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 154/321 (47%), Gaps = 14/321 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R + L++ G++GQ +K + R+
Sbjct: 19 LITVFGGSGFVGRHVVEALTKRGYRVRIAVRYPQKAYYMLQI-GEVGQTQMLKTDVRNYT 77
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+++ + + + L G +T +F+++ A+ ++ + + G + I +S L +
Sbjct: 78 SVEHALLGTDGAVFLPGSLAQTNKPNFQNIQVDGAKHVSELTAKAG--IPLIYMSTLISD 135
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ KA +E+ V A IMR + + G ED N A F + PLFG G
Sbjct: 136 ENASFSYARAKAISEQIVRNTHSQAVIMRSSVIFGPEDCFFNFLANFSRFMPIMPLFGGG 195
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV D+A V AL+ +GK Y+LGGP + T E + I
Sbjct: 196 QSKLQPVYVGDIAKFVVYALEKR-VVLGKNYDLGGPKVLTFQNTLEEILKVIHRKKR--T 252
Query: 249 VPFPVAKAVAMPREI-LLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLG 303
+P P+A + + L KVP P L ++I+ D IVS DN T + +G
Sbjct: 253 LPLPLAMGLFIGGFFGTLGKVPL---FPKLVTANQIHFLQKDHIVSQEAKDNGYTLEGVG 309
Query: 304 IVPHKLKGYPTEYLIWYRKGG 324
I P + YL +R G
Sbjct: 310 ITPKSMAAILPNYLWRFRPKG 330
>gi|33594302|ref|NP_881946.1| hypothetical protein BP3419 [Bordetella pertussis Tohama I]
gi|33598085|ref|NP_885728.1| hypothetical protein BPP3569 [Bordetella parapertussis 12822]
gi|33602978|ref|NP_890538.1| hypothetical protein BB4004 [Bordetella bronchiseptica RB50]
gi|384205599|ref|YP_005591338.1| hypothetical protein BPTD_3371 [Bordetella pertussis CS]
gi|408417387|ref|YP_006628094.1| hypothetical protein BN118_3670 [Bordetella pertussis 18323]
gi|410471819|ref|YP_006895100.1| hypothetical protein BN117_1096 [Bordetella parapertussis Bpp5]
gi|33564377|emb|CAE43682.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|33566643|emb|CAE38853.1| conserved hypothetical protein [Bordetella parapertussis]
gi|33568609|emb|CAE34367.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|332383713|gb|AEE68560.1| hypothetical protein BPTD_3371 [Bordetella pertussis CS]
gi|401779557|emb|CCJ65095.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408441929|emb|CCJ48429.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
Length = 303
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 143/293 (48%), Gaps = 24/293 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR++V +LA +VLVP R + R L++ L + ++ + DD +
Sbjct: 5 VIGGTGFIGRHLVARLAAQEHKVLVPTRR-YNKGRDLQV---LPTVTLIEADVHDDAELD 60
Query: 72 ATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
M + + V+NL+G + R F + + ERIA A G+ R + +S LGA
Sbjct: 61 RLMHRCDAVVNLVGVLHGGRGRPYGAGFARAHVLLPERIA-QACVRNGVARMLHVSALGA 119
Query: 128 SSSSPSRVFSTKAAAEEAVLREL----PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
S PS +K E A+ R W T+ RP+ + G +D +A+ + F P
Sbjct: 120 DSGGPSMYLRSKGDGEAAIQRVFGATGGW-TLFRPSVVFGPDDNFTRMFARLARLFPVLP 178
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G +R+QPVYV DVA A+ AAL +G + GKIYEL GP ++T+ E+ L
Sbjct: 179 LAG-ARSRMQPVYVGDVADAMMAALA-NGHTAGKIYELCGPQVYTLGEIVRLCALWSGHP 236
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA 296
++P + + A+ E LP L + D +++ T D + S A
Sbjct: 237 RPVCEMPMALGRMQALLFEC--------LPGDPLVSRDNLDSLTRDNVASGAA 281
>gi|405958984|gb|EKC25062.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Crassostrea gigas]
Length = 333
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 163/315 (51%), Gaps = 40/315 (12%)
Query: 19 LGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD----DNTIKATM 74
+GR++V +L ++GSQV++P+RG L+L GDLGQI+ F P D ++ ++ M
Sbjct: 1 MGRHIVNRLGRIGSQVIIPYRGDTFRLERLRLCGDLGQIL---FTPMDSIYHEDQMRKAM 57
Query: 75 AKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSR 134
+NVVINLIG+EYE+ +Y F D+ IA IAKE G+ RFI S L A + P
Sbjct: 58 MHSNVVINLIGKEYESDSYDFHDLYVDAPANIARIAKEM-GVERFIHFSHLNADPNPPEL 116
Query: 135 VF----------STKAAAE-EAVLREL-PWATIMRPAAMIGTEDRLLNKW---AQFVKKF 179
++ S K E + ++RE+ P A I RPA + G +D K+ ++ K
Sbjct: 117 IYFGTDLPRGNSSLKKKWEGDQLVREIFPEAIIFRPADIYGIKDWYFFKYIYHRRYSKIR 176
Query: 180 NFFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD 238
+ P++ +G T QPV+ DVAA V A+ D G Y GP+ + ++ + + +
Sbjct: 177 HAIPIWREGMDTVKQPVWSSDVAAGVLNAVFDTDAP-GNTYYCVGPERYCLNNMVDHITK 235
Query: 239 TI-REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT-SDTIVSDN- 295
RE+ + + V+ R+++ ++ + + N+D + SD IV +
Sbjct: 236 ICAREFRYITDI------DVSYIRKLIRQR------KNRIVNIDTLQREALSDLIVQRHL 283
Query: 296 ALTFQDLGIVPHKLK 310
+ T +DLG+ P L+
Sbjct: 284 SKTLEDLGVQPRSLQ 298
>gi|410421469|ref|YP_006901918.1| hypothetical protein BN115_3693 [Bordetella bronchiseptica MO149]
gi|408448764|emb|CCJ60449.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
Length = 303
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 143/293 (48%), Gaps = 24/293 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR++V +LA +VLVP R + R L++ L + ++ + DD +
Sbjct: 5 VIGGTGFIGRHLVARLAAQEHKVLVPTRR-YNKGRDLQV---LPTVTLIEADVHDDAELD 60
Query: 72 ATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
M + + V+NL+G + R F + + ERIA A G+ R + +S LGA
Sbjct: 61 RLMHRCDAVVNLVGVLHGGRGRPYGAGFARAHVLLPERIA-QACVRNGVARMLHVSALGA 119
Query: 128 SSSSPSRVFSTKAAAEEAVLREL----PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
S PS +K E A+ R W T+ RP+ + G +D +A+ + F P
Sbjct: 120 DSGGPSMYLRSKGDGEAAIQRVFGATGGW-TLFRPSVVFGPDDNFTRMFARLARLFPVLP 178
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G +R+QPVYV DVA A+ AAL +G + GKIYEL GP ++T+ E+ L
Sbjct: 179 LAG-ARSRMQPVYVGDVADAMMAALA-NGHAAGKIYELCGPQVYTLGEIVRLCALWSGHP 236
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA 296
++P + + A+ E LP L + D +++ T D + S A
Sbjct: 237 RPVCEMPMALGRMQALLFEC--------LPGDPLVSRDNLDSLTRDNVASGAA 281
>gi|334140472|ref|YP_004533674.1| NADH dehydrogenase [Novosphingobium sp. PP1Y]
gi|333938498|emb|CCA91856.1| NADH dehydrogenase [Novosphingobium sp. PP1Y]
Length = 320
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 155/325 (47%), Gaps = 20/325 (6%)
Query: 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMK 61
T +G I TV G +GF+GR++ Q+L G+++ + R + +K +G+LGQ+ +
Sbjct: 6 TDSLAGKIVTVLGGSGFVGRHLAQELLSRGARLRIASRNPQK-AYAIKPLGNLGQVQFAR 64
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFE-DVNHFMAERIAGIAKEHGGIMRFI 120
+ +++ A +A ++ V+NL+G +S D A + G F+
Sbjct: 65 VDVTRPDSLAAALAGSDAVVNLVG------AFSGNLDALQGKGAGAIAAAAKAAGASAFV 118
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
IS +G ++ S TKA EEA+ E P ATI+RP+ + G +D + + + + F
Sbjct: 119 HISAIGGNADSDVDYARTKAEGEEAIRAEFPGATILRPSLLFGPDDNFVMMFGRLIGTFP 178
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
P+FG ++QP++V D A A+ AL + GK YE+GGP++ T+ EL + +
Sbjct: 179 ALPVFGP-EAKLQPLFVDDAAQAIANALGNPAAHGGKTYEIGGPEVITMLELNQRIAKAE 237
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDNALTF 299
++ +P V++ +A L PG D+ + ++ S +
Sbjct: 238 GRSRSFIALPDSVSELIASATGWL----------PGAPITSDQFKLLKAGSVASGDLPGI 287
Query: 300 QDLGIVPHKLKGYPTEYLIWYRKGG 324
+LG+ P L + + +RK G
Sbjct: 288 AELGVSPRPLGLFLDRWATQFRKHG 312
>gi|225629825|ref|ZP_03787748.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591320|gb|EEH12437.1| NADH-ubiquinone oxidoreductase, putative [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 196
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG TGF+G+++V++LA+ G + + F ++ LKL G+LGQI K + D+ ++
Sbjct: 7 IFGGTGFIGKHIVRRLAEEGYLIKI-FTCNQEKAACLKLCGNLGQISIFKGDFFDEKSVL 65
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
M + +V INL+G YE + + F V+ +AERIA AK M I S +G +S
Sbjct: 66 EGMEECDVAINLVGILYEAKKHDFYAVHVKIAERIAKAAKMKNVPM-MIHFSAMGIENSK 124
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S+ +K E+AV A I+RP+ + G ED NK+A+ F PL G+G+T+
Sbjct: 125 LSKYAQSKLEGEKAVTSAFQEAIIIRPSLVFGKEDNFFNKFARLATILPFLPLIGNGTTK 184
Query: 192 IQPVYVVDVA 201
QP+ V D+A
Sbjct: 185 FQPICVTDLA 194
>gi|392577605|gb|EIW70734.1| hypothetical protein TREMEDRAFT_29093, partial [Tremella
mesenterica DSM 1558]
Length = 344
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 151/312 (48%), Gaps = 36/312 (11%)
Query: 19 LGRYVVQQL-AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKF----NPRDDNTIKAT 73
LG Y+ + L A + VL+ R + L +G QI+P +P ++
Sbjct: 1 LGSYIARSLVADPRNNVLLVSRNPKSLHDRLSHLGK--QILPPISADIASPSSSPQLREA 58
Query: 74 MAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPS 133
M A+ V++L+G T DV A R+A AKE G + R + IS +GA + +
Sbjct: 59 MEGAHAVVSLVGLLAATEK-EMVDVQQDGARRVADAAKEKG-VERVVMISAIGADKNGVT 116
Query: 134 RVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQ 193
TKAAAEE L P AT++RP+ + G D ++A+ K F P+FG G+T+ Q
Sbjct: 117 PYQRTKAAAEEYFLSLHPTATVIRPSIVFGPGDSFFTRFAEMAKWLPFLPVFGGGTTKFQ 176
Query: 194 PVYVVDVAAAVTAALKDDGTSM----GKIYELGGPDIFTVHELAEL-MYDTIREYPHYVK 248
PVYV D+A AV +DD + G+I E GGPDI T E+ L + + R P +
Sbjct: 177 PVYVGDLARAVEICCRDDAKVVDMVGGRIIEAGGPDILTYREIMNLTLLHSQRRRP-IIS 235
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSD----NALTFQDL 302
+PF V A L+++P LF L D++ D IVS N++ FQDL
Sbjct: 236 LPFWVGTLQAF----FLERLP-----QSLFTLTRDQVKQLRVDNIVSPHPLVNSVNFQDL 286
Query: 303 GIVPHKLKGYPT 314
L+ +P+
Sbjct: 287 ------LRAFPS 292
>gi|46201484|ref|ZP_00054963.2| COG0702: Predicted nucleoside-diphosphate-sugar epimerases
[Magnetospirillum magnetotacticum MS-1]
Length = 317
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 145/325 (44%), Gaps = 37/325 (11%)
Query: 23 VVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANV 79
+V++LA G V R DP LK MGD+GQ+ P++ + + ++ +A +
Sbjct: 1 MVKRLAAQGWVV----RAAVRDPIAAEFLKTMGDVGQVTPLRADITNPKSVAMAVAGVDA 56
Query: 80 VINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTK 139
V+N++G YE+ +F D H A + G+ R + +S LGA +S + +K
Sbjct: 57 VVNVVGILYESGRATF-DAIHVKGAANVAAAAKAAGVGRLVHLSALGADKNSEAAYARSK 115
Query: 140 AAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP---------------- 183
A EEAVL P A+I+RP+ + G +D N++ + P
Sbjct: 116 ALGEEAVLAAFPGASIVRPSVVFGPDDDFFNRFGKLAMISPVLPVFTADGFKPVCDESGC 175
Query: 184 ---LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
LFG G QPV V DVA AV L +DG GK +ELGGP +++ E+ EL+ +
Sbjct: 176 SIDLFGSGGPIFQPVSVADVAQAVVQML-EDGRHAGKTFELGGPRRYSMKEIMELVMAST 234
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
V +PF + M + L+ +P P + D++ D +
Sbjct: 235 GRSRILVPLPF----GLGMIQATFLQMLPKP-----MLTKDQVRMMKVDNVARGGKPGLS 285
Query: 301 DLGIVPHKLKGYPTEYLIWYRKGGP 325
DLGI P + Y+ Y K P
Sbjct: 286 DLGITPTSAEAILPLYMKRYGKQLP 310
>gi|395792640|ref|ZP_10472064.1| hypothetical protein MEI_00685 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|423713302|ref|ZP_17687562.1| hypothetical protein ME1_00308 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395423343|gb|EJF89538.1| hypothetical protein ME1_00308 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395432197|gb|EJF98186.1| hypothetical protein MEI_00685 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 332
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 145/320 (45%), Gaps = 12/320 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R C ++ +G++GQ +K + +
Sbjct: 13 LITVFGGSGFVGRHVVETLTKRGYRVRIAVR-CPQKAYYMLQIGEVGQTQMLKTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A + L G + +F+ + + ++ + E G + + +S L A+
Sbjct: 72 SVARALLGAEGAVFLPGSLTQANQSNFQKIQIDGTQNVSELTAEAG--IPLLYMSALVAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ K+ E+ V + P A IMRP+ + G ED N A F + PLFG G
Sbjct: 130 ENASFLYARVKSMCEKIVHSKHPQAIIMRPSVIFGPEDCFFNTLANFSRFLPIMPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV D+A V AL+ S GK Y+LGGP T + E + + +
Sbjct: 190 QSKLQPVYVGDIAEFVVRALEGQVIS-GKSYDLGGPQTVTFQNVLENILKIVHRKKTILS 248
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLGI 304
+P + IL PL P +I D IVS +N T + GI
Sbjct: 249 MPLSAGLLIG---GILGTIGKLPL-LPTFLTAHQIRFLQVDNIVSQEAIENGYTLEGAGI 304
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + YL +R G
Sbjct: 305 SPKTMAALLPSYLWRFRPQG 324
>gi|170084313|ref|XP_001873380.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650932|gb|EDR15172.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 316
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 154/329 (46%), Gaps = 33/329 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP-MKFNPRDDNTI 70
V GF+G ++ + L V + R L+ G ++P + + T+
Sbjct: 7 VICGAGFIGSHIARSLIASQRPVQISSRNPAKTHELLEFTTPKGPLLPAVSVDVTKPTTL 66
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
A +I+L+G + T FEDV AE +A A+ G + I S +GA++
Sbjct: 67 IHAFKDAGTIISLVGVMHGTPK-DFEDVQWKGAENVALAARAVGA--KVIHFSAIGANTK 123
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S F TKA E +VL P ATI+RP+ + G ED N++A+ + F P+FG G +
Sbjct: 124 SEIMYFKTKAMGENSVLDICPDATIIRPSLVFGPEDDFFNRFARLSRVLPFLPVFGGGKS 183
Query: 191 RIQPVYVVDVAAAV------TAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
R QPVYV D++ AV T +K + + GKI E GGP++FT H+L EL+ +
Sbjct: 184 RFQPVYVGDLSKAVEILCRGTPEIKKE--TSGKIIEAGGPEVFTYHQLMELVLKYSGRHR 241
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD--EINAYTSDTIVS----DNALT 298
+ PFP + + +L+ +P P LF + ++ D +V+ N ++
Sbjct: 242 PIISFPFP----FGLLQGAILENLP-----PNLFTVTRAQVKQLMVDNVVNIRPRANEIS 292
Query: 299 FQDLGIVPHKLKGYPTEYLIWYRKGGPKF 327
FQ+L L+ Y E L K P +
Sbjct: 293 FQNL------LEKYSNEPLTSVHKILPTY 315
>gi|240849712|ref|YP_002971100.1| NADH-ubiquinone oxidoreductase [Bartonella grahamii as4aup]
gi|240266835|gb|ACS50423.1| NADH-ubiquinone oxidoreductase [Bartonella grahamii as4aup]
Length = 332
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 150/322 (46%), Gaps = 16/322 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R + L++ G++GQ +K + +
Sbjct: 13 LITVFGGSGFVGRHVVETLTKRGYRVRIAVRYPQKAYYMLQI-GEVGQTQMLKTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G + +F++ A +A + + + I +S L A+
Sbjct: 72 SVARALLGADAAVFLPGSLKQANQSNFKNTQIDGAYNVAELTAQAA--IPLIYMSALVAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ K E+ V + P A I+RP+ + G ED N A + PLFG G
Sbjct: 130 ENASCLYARVKFMGEQIVHNKHPQAIIIRPSVIFGPEDCFFNTLADLSRFLPIMPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV DVA + AL D + GK Y+LGGP I T E + I +
Sbjct: 190 QSKLQPVYVGDVAEFIARAL-DGQVAWGKNYDLGGPQIITFQNTLENILKIIHRKKTILS 248
Query: 249 VPFPVAKAVAMPREIL--LKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDL 302
+P + IL + K+PF P L ++I D IVS +N T + +
Sbjct: 249 MPLSAGLLIG---GILGTIGKLPFV---PTLVTANQIRFLQMDNIVSKEAIENGYTLEGV 302
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P + + YL +R G
Sbjct: 303 GITPRAMAAFLPSYLWRFRPHG 324
>gi|399061632|ref|ZP_10746206.1| putative nucleoside-diphosphate sugar epimerase [Novosphingobium
sp. AP12]
gi|398035428|gb|EJL28671.1| putative nucleoside-diphosphate sugar epimerase [Novosphingobium
sp. AP12]
Length = 324
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 18/324 (5%)
Query: 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMK 61
T G I TV G +GF+GR++ Q+L G+++ + R ++ + +LGQ+
Sbjct: 10 TNALYGKIVTVLGGSGFVGRHLAQELLARGARLRIASR-YPKKAFTIRTLANLGQVQFAG 68
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
+ ++I A +A ++ V+NL+G D A + G+ F+
Sbjct: 69 VDVTKPDSIAAVLAGSDAVVNLVGAFGGNL-----DAVQGKGAGAIAAAAKVAGVSAFVH 123
Query: 122 ISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF 181
IS +GA + S TK E+AV P ATI+RP+ M G +DR + +A+ + +
Sbjct: 124 ISAIGADARSDIDYARTKGEGEDAVRAAFPEATILRPSLMFGPDDRFVMMFAELISRMPA 183
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
P+F ++QPV+V DVAAA+ AL D T G+ YE+ GP++ T+ E E +
Sbjct: 184 LPVFAP-QAKLQPVFVDDVAAAIGNALADPETHGGRTYEVAGPEVITMIEFNERIAAAQS 242
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDNALTFQ 300
+ ++P V+ +A L PG N D+ + ++ S
Sbjct: 243 RSRSFAQLPDMVSGLIASATGWL----------PGAPINSDQFKLLKAGSVASGTLPGIA 292
Query: 301 DLGIVPHKLKGYPTEYLIWYRKGG 324
DLG+ P L + +++ +RK G
Sbjct: 293 DLGVTPRPLGLFLDRWMVRFRKHG 316
>gi|49474860|ref|YP_032901.1| NADH-ubiquinone oxidoreductase [Bartonella henselae str. Houston-1]
gi|49237665|emb|CAF26848.1| NADH-ubiquinone oxidoreductase [Bartonella henselae str. Houston-1]
Length = 334
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 148/320 (46%), Gaps = 12/320 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R + L++ G++GQ ++ + +
Sbjct: 15 LITVFGGSGFVGRHVVEALTKRGYRVRIAVRSPQKAYYMLQI-GEVGQTQMLRTDIKCRA 73
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + ++ + L G + +F+ A+ ++ + E G + I +S L A+
Sbjct: 74 SVARALLGSDGAVFLPGSLAQANQPNFQKTQIEGAQNVSELTAEAG--IPLIYMSALVAN 131
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ K+ +EE + E P A IMRP+ + G ED N A PLFG G
Sbjct: 132 KNASFLYARVKSMSEEIIHNEHPQAIIMRPSIIFGPEDCFFNNLANLSCFLPIIPLFGGG 191
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVYV DVA + AL+ S GK Y+LGGP I T + E + I +
Sbjct: 192 QSKLQPVYVGDVAEFIVRALEGQVIS-GKSYDLGGPQIITFQNVLEYILKIIHRKKTILS 250
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLGI 304
+P + +L PL P L +I D IVS +N T + +GI
Sbjct: 251 MPLSAGLFIG---GLLGTIGKLPLA-PTLVTASQIRFLQIDNIVSQEAIENGYTLEGVGI 306
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + YL +R G
Sbjct: 307 TPKAMAALLPSYLWRFRPHG 326
>gi|402824635|ref|ZP_10873985.1| NADH dehydrogenase [Sphingomonas sp. LH128]
gi|402261820|gb|EJU11833.1| NADH dehydrogenase [Sphingomonas sp. LH128]
Length = 317
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 153/332 (46%), Gaps = 43/332 (12%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKF 62
SG I T+ G +GF+GR++ Q+L G+++ + R P+ +K +G+LGQ+
Sbjct: 7 SGKIVTILGGSGFVGRHLAQELLARGARLRIASR----HPKKAFAIKPLGNLGQVQFAGV 62
Query: 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMR---- 118
+ +T+ A +A ++ V+NL+G F A K G I
Sbjct: 63 DVTKADTVAAVLAGSDAVVNLVG--------------AFAGNLDALQGKGTGDIAAAAKA 108
Query: 119 -----FIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWA 173
F+ +S +GA + S TKA E AVL P ATI+RP+ M G +D +N +
Sbjct: 109 AGAAAFVHVSAIGADAGSEVAYARTKAEGEAAVLAAFPTATIVRPSLMFGPDDNFVNMFG 168
Query: 174 QFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELA 233
+ + + P+F ++QPV+V DVA A+ AL + GK +EL GP++ T+ EL
Sbjct: 169 ELISRLPALPVFAP-EAKLQPVFVDDVAVAIANAL-GRADAQGKTFELAGPEVVTMLELN 226
Query: 234 ELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIV 292
E + + ++P V+ +A L PG D+ + ++
Sbjct: 227 ERIAKAQGRSRAFAQLPDAVSGLIAAATGWL----------PGAPITTDQFKLLQAGSVA 276
Query: 293 SDNALTFQDLGIVPHKLKGYPTEYLIWYRKGG 324
S +A LG+ P L + +++ +RK G
Sbjct: 277 SGSAPGIGGLGVTPRPLGLFLDRWMVRFRKHG 308
>gi|412341678|ref|YP_006970433.1| hypothetical protein BN112_4399 [Bordetella bronchiseptica 253]
gi|408771512|emb|CCJ56313.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
Length = 303
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 143/293 (48%), Gaps = 24/293 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR++V +LA +VLVP R + R L++ L + ++ + DD +
Sbjct: 5 VIGGTGFIGRHLVARLAAQEHKVLVPTRR-YNKGRDLQV---LPTVTLIEADVHDDAELD 60
Query: 72 ATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
M + + V+NL+G + +R F + + ERIA A G+ R + +S LGA
Sbjct: 61 RLMHRCDAVVNLVGVLHGSRGRPYGAGFARAHVLLPERIAQ-ACVRNGVARMLHVSALGA 119
Query: 128 SSSSPSRVFSTKAAAEEAVLREL----PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
S PS +K E A+ R W T+ RP+ + G +D +A+ + F P
Sbjct: 120 DSGGPSMYLRSKGDGEAAIQRVFGATGGW-TLFRPSVVFGPDDNFTRMFARLARLFPVLP 178
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G +R+QPVYV DVA A+ AL +G + GKIYEL GP ++T+ E+ L
Sbjct: 179 LAG-ARSRMQPVYVGDVADAMMVALA-NGHTAGKIYELCGPQVYTLGEIVRLCALWSGHP 236
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA 296
++P + + A+ E LP L + D +++ T D + S A
Sbjct: 237 RPVCEMPMALGRMQALLFEC--------LPGDPLVSRDNLDSLTRDNVASGAA 281
>gi|56477348|ref|YP_158937.1| nucleoside-diphosphate-sugar epimerase [Aromatoleum aromaticum
EbN1]
gi|56313391|emb|CAI08036.1| predicted nucleoside-diphosphate-sugar epimerases [Aromatoleum
aromaticum EbN1]
Length = 321
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 147/314 (46%), Gaps = 27/314 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GFLG V QLA +V+VP R RHL L+ + + + + D T+
Sbjct: 7 ALIGGSGFLGSAVANQLAGAAVEVVVPTRRASRA-RHLLLLPTVDVV---EADVHDPATL 62
Query: 71 KATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGG-IMRFIQISCL 125
++ + VINL+G R F + + ++I +A H + + +S L
Sbjct: 63 AHLVSGVDAVINLVGILHSRSGSPYGRDFARAHVELPQKI--VAACHAARVPHLVHVSAL 120
Query: 126 GASSSSPSRVFSTKAAAEEAVLR--ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
GAS PS +KAA E A+ + P T++RPA M G D N +A+ +F P
Sbjct: 121 GASPDGPSEYLRSKAAGEAAIRASGDAPAWTVLRPAVMFGRGDHFTNLFARLATRFPLLP 180
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G R QPV+V DVAA + L+D ++G+ +EL GP ++T+ EL E I E
Sbjct: 181 LAG-ARARFQPVHVEDVAAVICRCLRDP-AAIGETFELAGPRVYTLRELVEY----ISEL 234
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
+ P+ +AM + L++ +P P + + D + + D + S L F G
Sbjct: 235 ASAPRPILPLPNGLAMMQAALMEWLPNP-----IMSRDNLRSMRVDNVASGAPLPF---G 286
Query: 304 IVPHKLKGYPTEYL 317
+ P L+ Y+
Sbjct: 287 MTPTPLEAVAPSYI 300
>gi|349700002|ref|ZP_08901631.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Gluconacetobacter
europaeus LMG 18494]
Length = 297
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 13/301 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ATVFG +GF+GR VV +LA+ G V V R D L+++GD+GQ+V + + D+
Sbjct: 5 VATVFGGSGFVGRSVVGRLARAGYVVRVAGR-TATDAATLRMLGDVGQVVSVVASITDEK 63
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
A + +++VINL+G +F + H G+ R I +S LGA
Sbjct: 64 ACVAAIEGSSLVINLVGILAPHGADTFTAI-HVEGAARVARLAAASGVERLIHVSALGAR 122
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S S +KA E V R +P A I+RP+ + G + +A+ + P+FG
Sbjct: 123 ADSLSAYARSKAEGECMVGRAMPEAVIIRPSLIFGVDGAFPAMFARMARFLPVMPVFG-A 181
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+TR QPV+V DVA + + G I+E GGP + T+ ++ + + +
Sbjct: 182 TTRFQPVWVGDVADGMI-RIATGADMAGAIFEFGGPQVLTMRQIVAWAA----RWGGHPR 236
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
F V + +A + ++L+ +P + D++ D +V+ A T LGI P
Sbjct: 237 PLFVVPRWLATVQGMVLEHLPGK-----MLTRDQVRLLYVDNVVAPGARTLDMLGIAPSP 291
Query: 309 L 309
+
Sbjct: 292 M 292
>gi|406706729|ref|YP_006757082.1| NmrA family protein [alpha proteobacterium HIMB5]
gi|406652505|gb|AFS47905.1| NmrA family protein [alpha proteobacterium HIMB5]
Length = 319
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 152/314 (48%), Gaps = 13/314 (4%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG TG +G ++++LAK +V V R +K + G I ++ NP D+N+I+
Sbjct: 8 IFGGTGQIGSNLLRKLAKNNFKVTVVTRNLHQKGNFIKTQANAGYIEIIETNPFDENSIR 67
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
KA++ INL+G +E +F++++ +A + KE + +F+ IS LG +S+
Sbjct: 68 PLFKKADICINLVGILFEKGKNNFKNIHTSFPSLLASLCKE-CDLDQFVHISALGIDAST 126
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S+ ++K E+ + P TI+RP+ + +D + + + FPL+ +G T+
Sbjct: 127 DSKYSASKLEGEKKIKELFPSTTILRPSVVYSVDDNFTTTFMTLLSRLPVFPLYYNGETK 186
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
P++ D+ + + D+ S ++ E GGP++ + ++ E + I++ + +P
Sbjct: 187 FMPIHCSDLTDVIFKVIDDEIKS--ELIECGGPEVLSFKDIVETLMQLIKKKRLLLPLPL 244
Query: 252 PVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL-K 310
+A E LP P L D++ + I S+ T +G+ K+ K
Sbjct: 245 FFGNIIAKTMEF--------LPHP-LLTTDQLKLLKYNNIYSNKFKTNSSIGVPGKKIFK 295
Query: 311 GYPTEYLIWYRKGG 324
+Y +++GG
Sbjct: 296 EEVKKYCYMWKEGG 309
>gi|386401000|ref|ZP_10085778.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
WSM1253]
gi|385741626|gb|EIG61822.1| putative nucleoside-diphosphate sugar epimerase [Bradyrhizobium sp.
WSM1253]
Length = 287
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 133/300 (44%), Gaps = 25/300 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG TGFLG + + L P R P D+ Q+ + N D+ ++
Sbjct: 1 MFGGTGFLGSRIARHLCSHK----FPVRIASRHP-------DV-QLQSVAANVHDERSVA 48
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+ A +N + E +F V H A +I G+ R + +S +GA ++S
Sbjct: 49 NALVGAYGAVNAVSLYRERGGETFHSV-HVEAAQIVAAQARRAGVERLVHVSGIGADAAS 107
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
PS + E AV E A I+RPA M G +D L + +++ +P+FG G TR
Sbjct: 108 PSLYIRKRGEGERAVRAEFAGAFIVRPAVMFGPDDAFLGTVLKLLRRLPIYPMFGRGRTR 167
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
+QP +V DVA AV + + ++E GGP ++ +L + P + +PF
Sbjct: 168 LQPAHVEDVAEAVVRII-ERAEPHPTVFEFGGPTRYSYEQLLRAIAQQAGLSPRLIPIPF 226
Query: 252 PVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDNALTFQDLGIVPHKLK 310
V A+A EIL PGL +++ D++ S F +LGI PH ++
Sbjct: 227 AVWHALAWASEIL----------PGLPLTRNQVELMRIDSVSSPEMSGFAELGISPHSIE 276
>gi|226940410|ref|YP_002795484.1| NADH-ubiquinone oxidoreductase [Laribacter hongkongensis HLHK9]
gi|226715337|gb|ACO74475.1| Probable NADH-ubiquinone oxidoreductase [Laribacter hongkongensis
HLHK9]
Length = 322
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 142/299 (47%), Gaps = 19/299 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G GF+G ++ ++L + G + ++ R P H + + D + +
Sbjct: 9 LLGGGGFIGSWLTERLTETGKETVILTR----RPDHAASARIFPTAEIVGVDACDTDALS 64
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+A + V+NL+G + +R FE H A A GI R++ +S LGA++ S
Sbjct: 65 QVLAGCDAVVNLVGILHGSR-AQFEKA-HVALTISALAACRQAGIERYLHVSALGAAADS 122
Query: 132 PSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
PS +KAAAE V L W TI RP+ + G +DR LN +A+ PL G G
Sbjct: 123 PSLYQQSKAAAEAHVRASALKW-TIFRPSVLFGPQDRFLNLFARLQASLPCLPLAGAG-C 180
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
R QPV+V DVA A+ +AL+ D T++G+ EL GPDI T+ EL E + + + +P
Sbjct: 181 RFQPVWVGDVARALGSALELD-TTVGQTLELAGPDILTLRELVEYVGELTGNERPVISLP 239
Query: 251 FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
+A A E+ LP L + D + + SD VS LG PH L
Sbjct: 240 DSLAMLQAGLMEL--------LPGEPLMSRDNVRSLASDN-VSQAGFPSGLLGFAPHSL 289
>gi|311104198|ref|YP_003977051.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
xylosoxidans A8]
gi|310758887|gb|ADP14336.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
xylosoxidans A8]
Length = 302
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 151/319 (47%), Gaps = 34/319 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP----MKFNPRDD 67
V G TGF+GR++V +L+ Q++VP R L G QI+P ++ + DD
Sbjct: 5 VIGGTGFIGRHLVARLSADQHQIVVPTR--------LYSRGRDLQILPTVTLLECDVHDD 56
Query: 68 NTIKATMAKANVVINLIGREYET--RNY--SFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
T+ + + V+NL+G + R Y +F + + +RIA + G + R + +S
Sbjct: 57 ATLDSLAQGCDAVVNLVGILHGNAGRPYGSAFARAHVLLPQRIAQACRRQG-VRRLLHVS 115
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELP-WA----TIMRPAAMIGTEDRLLNKWAQFVKK 178
LGA S+ S +K E A+ +EL W TI RP+ + G +D+ N +A +
Sbjct: 116 ALGADSNGDSMYQRSKGDGEAAIKQELQGWQDGGWTIFRPSVVFGPDDKFTNMFAGLARW 175
Query: 179 FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD 238
PL G R+QPVYV DV AA+ +AL + T GK YELGGP ++T+ E+A L
Sbjct: 176 LPALPLAG-AHVRMQPVYVGDVVAAIVSALGNTHTC-GKTYELGGPQVYTLGEIARLCAA 233
Query: 239 TIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
V +P V + A E LP L + D +++ D I +
Sbjct: 234 WGGHPRPVVSMPMGVGRMQARLFEC--------LPGTPLMSRDNLDSLRRDNICTGP--I 283
Query: 299 FQDLGIVPHKLKGYPTEYL 317
+L +VP L+ YL
Sbjct: 284 APELHVVPTGLEAVAPRYL 302
>gi|262276743|ref|ZP_06054536.1| putative NADH-ubiquinone oxidoreductase 39 kda subunit [alpha
proteobacterium HIMB114]
gi|262223846|gb|EEY74305.1| putative NADH-ubiquinone oxidoreductase 39 kda subunit [alpha
proteobacterium HIMB114]
Length = 317
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 149/318 (46%), Gaps = 16/318 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRG-CEDDPRHLKL-MGDLGQIVPMKFNPRDDN 68
+ FG GF+G +V+ LA G ++ + R ++D LK GD GQI K N +
Sbjct: 8 SFFGGAGFIGSSIVKILANKGYEIKIATRNPYDEDVIQLKSSCGDPGQISLHKININSKD 67
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++A + ++N+ INL+G YE +F+ ++ + K+ I FI S LG
Sbjct: 68 QVEAFIKESNICINLVGILYEKGQNTFKKIHTDFVSNLVESIKKQNSIKHFIHFSSLGVK 127
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMI-GTEDRLLNKWAQFVKKFNFFPLFGD 187
+ S+ +K AEE + L TI++P+ + G E+ N +A+ K F PL +
Sbjct: 128 GGTESKYLESKFKAEELIKENLENYTIIKPSVVYGGGENDFTNMFAKLAKLFPIIPL-AN 186
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
+ + QPVYV D+A + + D + +E G +IFT+ EL +++ + IR +
Sbjct: 187 SNVKFQPVYVGDIAKGIEKII--DEEIKKETFEFVGDEIFTLEELVKIISNEIR--AKNI 242
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS-DTIVSDNALTFQDLGIVP 306
VP P R L P+P + LD+I S D I ++N +DL +
Sbjct: 243 IVPIPSWAGRMQGRIFQLA------PKP-MLTLDQIKTLESGDNIATNNNKILKDLIVEL 295
Query: 307 HKLKGYPTEYLIWYRKGG 324
++ YL +R G
Sbjct: 296 EGIRKIIPNYLYRFRPEG 313
>gi|189194571|ref|XP_001933624.1| NADH-ubiquinone oxidoreductase 40 kd subunit precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187979188|gb|EDU45814.1| NADH-ubiquinone oxidoreductase 40 kd subunit precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 274
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 131/263 (49%), Gaps = 20/263 (7%)
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
R+ +I+ ++ +++V NLIGR+Y T+N+ EDV+ ERI ++ I RF+Q+S
Sbjct: 4 RNTQSIEESVRHSDIVYNLIGRDYPTKNFDLEDVHVSGTERIVDAVAKYD-IDRFVQVSS 62
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWA---QFVKKFNF 181
A S S + TKA E P TI+RPA M G EDR L++ A + N
Sbjct: 63 HSAHPESESEFYRTKARGEIVARSIYPETTIVRPAPMFGFEDRFLHRLASPSNIITANNL 122
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
R +PV+V+DV A+ L DD T+ + YEL GP +++ E+ EL+
Sbjct: 123 -------QERSRPVHVIDVGMALERMLHDDTTA-AQTYELYGPTEYSMAEVRELVEKETM 174
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
++ +P + K +A LL +P+ + DE+ + I+ NA TF+D
Sbjct: 175 HPKRHINIPKRILKPLAHYANKLLW---WPIT-----SADEVEREFINQIIDKNAKTFKD 226
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
L I P +LK +YL YR
Sbjct: 227 LDIEPVELKAMTFDYLKGYRSSS 249
>gi|91762365|ref|ZP_01264330.1| probable NADH-ubiquinone oxireductase [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718167|gb|EAS84817.1| probable NADH-ubiquinone oxireductase [Candidatus Pelagibacter
ubique HTCC1002]
Length = 322
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 154/315 (48%), Gaps = 14/315 (4%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG +G +GR+++++L K +V V R +K + G I ++ N D+ I+
Sbjct: 8 IFGGSGQIGRHLIRKLTKNNYKVTVVTRNLHQKGYAIKTQANAGYIDIVEANIFDEKKIR 67
Query: 72 ATMAKANVVINLIGREYET-RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
++ ++ INLIG YE+ + +F++++ ++ + KE+ + +FI +S LG +++
Sbjct: 68 KLFSQTDICINLIGILYESGKGNTFKNIHSIFPSILSKLCKEYK-VQQFIHLSALGINNA 126
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S +K E + + P ATI+RP+ + +D + + + FFPL+ +GST
Sbjct: 127 PDSEYAKSKLNGELNIQKNFPLATILRPSVVYSVDDNFTTSFMTLLSRLPFFPLYYNGST 186
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
+ P++ D+ + + + S KI E GPDI ++ E+ + + I + + VP
Sbjct: 187 KFAPIHCSDLTDTIYHVVSKNIYS--KIIECVGPDILSLKEILKKLLHLIDK--KRLLVP 242
Query: 251 FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLK 310
P+ A + L FP P L +D++ D + S T D+G+ ++
Sbjct: 243 LPLFAATMSAKVFQL----FPKP---LLTIDQLTLLKYDNVPSGKYQTNADIGVPSTRVF 295
Query: 311 GYPTE-YLIWYRKGG 324
E Y +R+GG
Sbjct: 296 DNEVEKYSYMWREGG 310
>gi|359795851|ref|ZP_09298464.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
arsenitoxydans SY8]
gi|359366170|gb|EHK67854.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
arsenitoxydans SY8]
Length = 312
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 147/316 (46%), Gaps = 28/316 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR++V +L QV+VP R R L+L L + ++ + DD ++
Sbjct: 5 VIGGTGFIGRHLVARLCADQHQVIVPTRLFARG-RDLQL---LPTVTLLQTDIHDDASLD 60
Query: 72 ATMAKANVVINLIGREYET--RNYS--FEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ +VV+NL+G + R Y F + + +RIA HG + R + +S LGA
Sbjct: 61 RLVQGCDVVVNLVGILHGNAGRPYGSDFARAHVHLPQRIAQACLRHG-VHRLLHVSALGA 119
Query: 128 SSSSPSRVFSTKAAAEEAV------LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF 181
SS S +K E A+ R+ W TI RP+ + G +D N +A +
Sbjct: 120 DSSGDSMYQRSKGDGEAAIKQAFHDRRDGCW-TIFRPSVLFGPDDHFTNMFASLARWLPV 178
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
PL G R+QPVYV DV A++ AL D T GK YELGGP ++T+ E+A L
Sbjct: 179 LPLAG-AHVRMQPVYVGDVVTAMSTALGDTHTC-GKTYELGGPQVYTLGEIARLCAAWSG 236
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
+ +P V + A E +P L + D +++ D I S +
Sbjct: 237 HPRPVISIPMGVGRMQARLFEC--------MPGTPLMSRDNLDSLRRDNICS--GPIAPE 286
Query: 302 LGIVPHKLKGYPTEYL 317
L +VP L+ YL
Sbjct: 287 LHVVPTGLEAVAPRYL 302
>gi|302698293|ref|XP_003038825.1| hypothetical protein SCHCODRAFT_48473 [Schizophyllum commune H4-8]
gi|300112522|gb|EFJ03923.1| hypothetical protein SCHCODRAFT_48473 [Schizophyllum commune H4-8]
Length = 334
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 129/256 (50%), Gaps = 23/256 (8%)
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
R +T++ A+VV++L+G ET FE+++ A +A +A + G + I IS
Sbjct: 76 RKIDTLRPIFKDASVVVSLVGILNETWE-QFEEIHVQGACNVAQVAHDVGA--KLIHISA 132
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GA +SP +K E AVLR P ATI+RP+ + G ED N++A K F P
Sbjct: 133 IGADENSPILYAKSKGLGERAVLRVCPDATIIRPSLVFGPEDSFFNRFATLSKYLPFLPA 192
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKD----DGTSMGKIYELGGPDIFTVHELAELMYDTI 240
FG G+ R QPVYV D+A A+ + D GKI+E GGP+IFT E+ EL+
Sbjct: 193 FGGGTARFQPVYVDDIAKAIEIISRRNRGMDTRVAGKIFEAGGPEIFTWREIMELVLKYS 252
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDN--- 295
+ +PF + K + +L+++P LF + D++ D IV D
Sbjct: 253 GRTRPVISLPFALGKM----QGAVLEQLP-----ENLFTVTRDQVETLRYDNIVKDTSTC 303
Query: 296 -ALTFQD-LGIVPHKL 309
A +F D L HKL
Sbjct: 304 PASSFSDLLATQRHKL 319
>gi|293603638|ref|ZP_06686059.1| NAD-dependent epimerase/dehydratase [Achromobacter piechaudii ATCC
43553]
gi|292818074|gb|EFF77134.1| NAD-dependent epimerase/dehydratase [Achromobacter piechaudii ATCC
43553]
Length = 306
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 147/320 (45%), Gaps = 36/320 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP----MKFNPRDD 67
V G TGF+GR+++ +L+ Q++VP R L G Q++P ++ + DD
Sbjct: 5 VIGGTGFIGRHLIARLSGDLHQIIVPTR--------LLARGSELQVLPTTTLIQTDIHDD 56
Query: 68 NTIKATMAKANVVINLIGREY----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
+ ++ + V+NL+G + + +F + + +RIA + HG + R + IS
Sbjct: 57 AVLDRLVSGCDAVVNLVGILHGNVGKPYGSAFARAHVHLPQRIARACQRHG-VRRLLHIS 115
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELP------WATIMRPAAMIGTEDRLLNKWAQFVK 177
LGA S S +K E A+ E P W TI RP+ + G +D N +A +
Sbjct: 116 ALGADSQGDSMYQRSKGDGEAAIKAEFPSDNDSGW-TIFRPSVIFGPDDNFTNMFASLAR 174
Query: 178 KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
PL G R+QPVYV DV AA+ AL D+ T GK YELGGP ++T+ E+A L
Sbjct: 175 WLPVLPLAG-AHARMQPVYVGDVVAAMATALADNHTC-GKTYELGGPQVYTLGEIARLCA 232
Query: 238 DTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297
V VP V + A E +P L + D +++ D I
Sbjct: 233 AWSGHPRPVVPVPMGVGRIQARLFEC--------MPGEPLMSRDNLDSLRRDNICV--GP 282
Query: 298 TFQDLGIVPHKLKGYPTEYL 317
+L +VP L+ YL
Sbjct: 283 IAPELRVVPTGLEAVAPRYL 302
>gi|422322814|ref|ZP_16403854.1| NADH dehydrogenase [Achromobacter xylosoxidans C54]
gi|317402224|gb|EFV82813.1| NADH dehydrogenase [Achromobacter xylosoxidans C54]
Length = 306
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 151/315 (47%), Gaps = 26/315 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR+++ +L+ Q+LVP R R L++ L + + + DD+ +
Sbjct: 5 VIGGTGFIGRHLIARLSGGQHQILVPTRR-YGQGRELQI---LPTVTLLASDVHDDDALD 60
Query: 72 ATMAKANVVINLIGREYET--RNYS--FEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+VV+NL+G + R Y F + + +RIA + G + R + +S LGA
Sbjct: 61 RLARDCDVVVNLVGILHGNAGRPYGSDFAQAHVHLPQRIARACRRQG-VRRLLHVSALGA 119
Query: 128 SSSSPSRVFSTKAAAEEAVLRELP-WA----TIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
S+ S +K E A+ +EL W T+ RP+ + G +D N +A+ +
Sbjct: 120 DSNGGSMYQRSKGDGEAAIRQELADWREGGWTMFRPSVVFGPDDNFTNMFARLARWLPVL 179
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
PL G R+QPVYV DV +A+ +AL + + GK YELGGP ++T+ E+A L
Sbjct: 180 PLAG-AHARMQPVYVGDVVSAMLSALANT-HACGKTYELGGPQVYTLGEIARLCAGWSGH 237
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
+ VP V + A+ E LP L + D +++ SD I A +L
Sbjct: 238 PRPVMSVPMGVGRMQALLFEC--------LPGRPLMSRDNLDSLRSDNIC--GAPMAPEL 287
Query: 303 GIVPHKLKGYPTEYL 317
+VP L+ YL
Sbjct: 288 NVVPTGLEAVAPGYL 302
>gi|71083205|ref|YP_265924.1| NADH-ubiquinone oxireductase [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062318|gb|AAZ21321.1| probable NADH-ubiquinone oxireductase [Candidatus Pelagibacter
ubique HTCC1062]
Length = 322
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 152/315 (48%), Gaps = 14/315 (4%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG +G +GR+++++L K +V V R +K + G I ++ N D+ I+
Sbjct: 8 IFGGSGQIGRHLIRKLTKNNYKVTVVTRNLHQKGYAIKTQANAGYIDIVEANIFDEKKIR 67
Query: 72 ATMAKANVVINLIGREYET-RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
++ ++ INLIG YE+ + +F++++ ++ + KE+ + +FI +S LG + +
Sbjct: 68 KLFSQTDICINLIGILYESGKGNTFKNIHSIFPSILSKLCKEYK-VQQFIHLSALGINDA 126
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S +K E + + P ATI+RP+ + +D + + + FFPL+ +GST
Sbjct: 127 PDSEYAKSKLDGELNIQKNFPLATILRPSVVYSVDDNFTTSFMTLLSRLPFFPLYYNGST 186
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
+ P++ D+ + + S KI E GPDI ++ E+ + + I + V +P
Sbjct: 187 KFAPIHCSDLTDTIYHVVSKSIYS--KIIECVGPDILSLKEILKKLLHLIDKKRLLVPLP 244
Query: 251 FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLK 310
VA A KV P+P L +D++ D + S T D+G+ ++
Sbjct: 245 LFVATMSA--------KVFQLFPKP-LLTIDQLTLLKYDNVPSGKYQTNADIGVPSTRVF 295
Query: 311 GYPTE-YLIWYRKGG 324
E Y +R+GG
Sbjct: 296 DNEVEKYSYMWREGG 310
>gi|357974554|ref|ZP_09138525.1| NADH dehydrogenase [Sphingomonas sp. KC8]
Length = 310
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 159/319 (49%), Gaps = 23/319 (7%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPR 65
+ T+FG GF+GRYV Q+L G++V R E DPRH +K +G LGQ +
Sbjct: 4 LVTLFGGGGFIGRYVAQELLSAGARV----RLAERDPRHAWFIKSLGGLGQTQFAAADVT 59
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+++ +A ++VVINL+G N F+ V+ A +A A++ G+ + +S +
Sbjct: 60 KPDSVARAVAGSDVVINLVG----ILNGDFDAVHVAGARNVAEAARD-AGVGALVHVSAI 114
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA +++ S +K E AV ATI+RP+ + G ED+ +N++A + P+
Sbjct: 115 GADAAAESAYGRSKGEGEAAVRAAFADATIIRPSVVFGPEDQFVNRFAALAR-MPVLPVI 173
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GS R+QPV+V DVA A+ AA D + +ELGGP++ ++ +L + P
Sbjct: 174 -RGSVRLQPVFVADVARAIAAAALDPARYARRTFELGGPEMLSMADLNAWIARATGRTPA 232
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
V++P A+ L+ ++ P + D+ D +V+ A F GI
Sbjct: 233 IVQIPDGAAR--------LMARLGGWAPGAPI-TWDQWLMLQKDNVVASGAEGFAAFGID 283
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P L+ +L+ YR+ G
Sbjct: 284 PRPLEAVAPGWLVQYRRHG 302
>gi|270356864|gb|ACZ80651.1| putative NADH dehydrogenase [Filobasidiella depauperata]
Length = 383
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 124/256 (48%), Gaps = 45/256 (17%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG TVFG+TGFL RY++Q+LA+ GSQV+VP+R ED+ R L+ GDLGQIVP++++ R
Sbjct: 61 SGHTVTVFGSTGFLARYLIQKLARQGSQVVVPYRD-EDEKRRLRPCGDLGQIVPLEWDAR 119
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
I A N RN + F ++R I
Sbjct: 120 ----IPEQTADPVYCRNCY------RNERPPSHSCFPSQRQPKIRHPE------------ 157
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
+ TK A E AV P ATI+RP+ + G ED LLN A++ +
Sbjct: 158 ---------FYRTKYAGERAVRDAFPEATIVRPSQLFGYEDWLLNAIARYPILYK----L 204
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G T++ PV+VVDVA A+ L TS + L GP++++ EL L+ + +
Sbjct: 205 NQGRTKLFPVHVVDVAEALNKMLNAPVTSAASTFALPGPELYSFAELERLVSSLLLK--- 261
Query: 246 YVKVPFPVAKAVAMPR 261
PV+ A ++P+
Sbjct: 262 ------PVSSAPSLPK 271
>gi|297182778|gb|ADI18932.1| predicted nucleoside-diphosphate-sugar epimerases [uncultured SAR11
cluster bacterium HF0010_09O16]
Length = 318
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 13/314 (4%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
++G +G +GR+++++L K +V V R +K G+ G I ++ N D+ I+
Sbjct: 8 IWGGSGQIGRHLIRKLTKNEYRVTVVTRNIHQKGLLIKSQGNQGWINVVEANIFDEKKIR 67
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+ +A++ INLIG YE + +FE+++ +A + KE+ + +FI +S LG +
Sbjct: 68 SLFQEADICINLIGILYEKKGSTFENIHTLFPSILAKLCKEY-NLEQFIHLSALGVDKAI 126
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S +K E+ +L+ P +TI+RP+ + + D + + FPL+ G T
Sbjct: 127 DSNYAKSKLEGEKKILKNFPLSTILRPSLVYSSSDSFSTTMMTLLSRLPVFPLYYSGKTL 186
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
P++ D+ + + + S +I E GP+ T E+ E + I + + VP
Sbjct: 187 FMPIHAKDLVDIIFNVVSKNTNS--QIIECVGPETMTFKEILEKLLKLIGKRRLLLPVPL 244
Query: 252 PVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKG 311
K +A KV +P+P L D++ D + S T D+G+ L
Sbjct: 245 IFGKTIA--------KVFQLMPKP-LLTEDQLRLLKYDNVASGKYKTNIDIGLPAKSLFE 295
Query: 312 YPTE-YLIWYRKGG 324
E Y +R+GG
Sbjct: 296 IEVEKYCYMWREGG 309
>gi|222623857|gb|EEE57989.1| hypothetical protein OsJ_08746 [Oryza sativa Japonica Group]
Length = 335
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 72/101 (71%), Gaps = 18/101 (17%)
Query: 109 IAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRL 168
++KEHGG MRFIQ+SCLGAS+SS SR+ KAA EE+VL+E P ATIMRPA MIGTEDR+
Sbjct: 231 VSKEHGGFMRFIQVSCLGASASS-SRMLRAKAAGEESVLKEFPEATIMRPATMIGTEDRI 289
Query: 169 LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209
LN+W Q IQPVYVVDVAAA+ +LK
Sbjct: 290 LNRWVQ-----------------IQPVYVVDVAAAIVNSLK 313
>gi|423015914|ref|ZP_17006635.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
xylosoxidans AXX-A]
gi|338780973|gb|EGP45369.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
xylosoxidans AXX-A]
Length = 306
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 148/315 (46%), Gaps = 26/315 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR+++ +LA Q+LVP R R L+L L + + + DD+ +
Sbjct: 5 VIGGTGFIGRHLIARLAGGQHQILVPTRR-YGQGRELQL---LPTVTLLASDVHDDDALD 60
Query: 72 ATMAKANVVINLIG--REYETRNYS--FEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ + V+NL+G R Y F + + +RIA + G+ R + +S LGA
Sbjct: 61 HLVRGCDAVVNLVGILHGNSGRPYGSDFARAHVHLPQRIARACRRL-GVRRLLHVSALGA 119
Query: 128 SSSSPSRVFSTKAAAEEAVLRELP-WA----TIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
SS S +K E A+ +EL W TI RP+ + G +D N +A+ +
Sbjct: 120 DSSGASMYQRSKGDGEAAIKQELADWREGGWTIFRPSVVFGADDNFTNMFARLARWLPLL 179
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
PL G R+QPV+V DV A+ A L + T GK YELGGP ++T+ E+A L
Sbjct: 180 PLAG-AHVRMQPVFVGDVVTAMLATLGNTHT-WGKTYELGGPQVYTLGEIARLCAGWGGN 237
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
+ +P + + AM E LP L + D +++ SD I A +L
Sbjct: 238 PRPVLNMPMGLGRMQAMLFEC--------LPGRPLMSRDNLDSLRSDNICG--APIAPEL 287
Query: 303 GIVPHKLKGYPTEYL 317
+VP L+ YL
Sbjct: 288 NVVPTGLEAVAPGYL 302
>gi|51891542|ref|YP_074233.1| NADH-ubiquinone oxidoreductase [Symbiobacterium thermophilum IAM
14863]
gi|51855231|dbj|BAD39389.1| putative NADH-ubiquinone oxidoreductase [Symbiobacterium
thermophilum IAM 14863]
Length = 303
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 151/304 (49%), Gaps = 28/304 (9%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKF-NPRDD 67
+ V G TGF+G Y+V++L + G +V+V R DP K G + V ++ + D
Sbjct: 3 VVLVAGGTGFIGSYIVRRLTQDGHRVIVMSR----DPG--KARGRVPDGVEVRAGDVTDG 56
Query: 68 NTIKATMAKANVVINLIG-----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
T+ +A A +V+ + E R +++ V+ R+ G A++ G+ RF+ I
Sbjct: 57 ATLGPALAGAEIVVCAVQFPNHPVENPRRGHTYIRVDGEGTVRLVGAARK-AGVSRFVYI 115
Query: 123 SCLGASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
S G F K AE+A+ RE +P+ TI RP+ + G EDR LNK+A F +
Sbjct: 116 SGAGTREGQTKPWFRAKLMAEKAI-RESGIPY-TIFRPSWVYGPEDRSLNKFATFARLLP 173
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
F P+ G G TR+QP+YV D+A AV A+L+ G ++ + Y++GGP T+ E+ M +
Sbjct: 174 FVPVIGSGRTRVQPLYVEDLADAVAASLR-TGAALNRTYDIGGPQELTMDEIIRTMLWVM 232
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
+ P + KA A P L+ +P P PG + + DN Q
Sbjct: 233 GRRRPLLHSPAWLMKAAAWP----LQFLPTPPLSPGAVDFVLMEEPV------DNGQVLQ 282
Query: 301 DLGI 304
DLG+
Sbjct: 283 DLGL 286
>gi|452753220|ref|ZP_21952955.1| NAD-dependent epimerase/dehydratase [alpha proteobacterium JLT2015]
gi|451959424|gb|EMD81845.1| NAD-dependent epimerase/dehydratase [alpha proteobacterium JLT2015]
Length = 311
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 130/253 (51%), Gaps = 10/253 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLMGDLGQIVPMKFNPR 65
+ TVFG GF+GRYVVQ+LA+ G+++ R DP + LK + LGQ+ ++ +
Sbjct: 4 LVTVFGAAGFIGRYVVQELARRGARI----RAVTRDPHSAQSLKPLAALGQMAIVRGSVT 59
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ ++ A A+ VINL+G E +F V H R A G + IS +
Sbjct: 60 EEASVAAACEGADTVINLVGILSEGEQ-TFGAV-HVAGARNVAKAANAAGASALVHISAI 117
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA + TK A E AV P A I++P+ + G ED LN++A ++ P+
Sbjct: 118 GADPEAEPAYARTKGAGEGAVRDAFPGAIILQPSIVFGPEDEFLNRFASLIRMAPIMPVV 177
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G+ QP+YVVD+A A+ A +GK YELGGP+ T+ EL + TI +
Sbjct: 178 A-GNAVFQPIYVVDLAEAIAEAALRPEEHVGKSYELGGPETVTMRELFAWIARTIGKTES 236
Query: 246 YVKVPFPVAKAVA 258
+V VP V+ +A
Sbjct: 237 FVDVPDGVSGRLA 249
>gi|319407904|emb|CBI81558.1| NADH-ubiquinone oxidoreductase [Bartonella schoenbuchensis R1]
Length = 333
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 152/323 (47%), Gaps = 17/323 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR++V+ L K G +V + R + L++ G++GQ + + ++
Sbjct: 13 LITVFGGSGFVGRHIVETLTKQGYRVRIAVRHPQKAYYMLQV-GEVGQTQMLATDVKNRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ + A+ I L G + +F++ A+ +A ++ + + I +S L A+
Sbjct: 72 CVARALLGADGAIFLPGSLTQASQSNFQNAQTDGAKNVAELSAQAN--IPLIHMSTLIAN 129
Query: 129 SSSPSRVFS-TKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ S ++ K +E+ V P A IMRP+ + G ED N A + PLFG
Sbjct: 130 DENTSCSYAHVKFTSEQIVRHSHPQAIIMRPSVIFGPEDCFFNTLANLSRFSPIIPLFGG 189
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G +++QPVYV D+A V AL+ S GK Y+LGGP + T E + I +
Sbjct: 190 GQSKLQPVYVGDIAEFVARALEGKVAS-GKSYDLGGPVVMTFQNAIENVLKIIHRKKIVL 248
Query: 248 KVPFPVAKAVAMPREIL--LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQD 301
+P + + IL + K+P P L D+I D IVS A+ T +
Sbjct: 249 SMPLSIGLFMG---NILGNIGKIPL---LPELITADQIRFLQIDNIVSQEAIKNGRTLEG 302
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
+GI P + YL +R G
Sbjct: 303 VGISPKTMSAILPSYLWRFRPQG 325
>gi|149184920|ref|ZP_01863237.1| NADH ubiquinone oxidoreductase, putative [Erythrobacter sp. SD-21]
gi|148831031|gb|EDL49465.1| NADH ubiquinone oxidoreductase, putative [Erythrobacter sp. SD-21]
Length = 344
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 150/327 (45%), Gaps = 34/327 (10%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR---HLKLMGDLGQIVPMKF 62
+G + G TGFLG YV Q L G+++ + C +P+ LK + +LGQ+ +
Sbjct: 36 NGKTVALMGGTGFLGNYVAQALLSRGARLRI----CGRNPQAAFKLKPLANLGQLQFARM 91
Query: 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFE-DVNHFMAERIAGIAK--EHGGIMRF 119
+ D +++ + A+ V+NL+G SF+ D+ M E +A+ + G M F
Sbjct: 92 DATDRRSVEQCIKGADAVVNLVG--------SFDGDLARLMGEAPGWMAEAAKKTGAMSF 143
Query: 120 IQISCLGASSSS--PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK 177
+ +S + A + S K E V ATI+RP+ + G +D LN + + +
Sbjct: 144 VHVSAIAAEPEEDWSNEYASAKHMGERRVTEAFKNATIVRPSIIFGKDDNFLNMFGELIS 203
Query: 178 KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
K P+FG +Q VYV DVA A+ ++++ G GK YELGGP+ ++ E+ +
Sbjct: 204 KLPVLPVFGP-EAELQLVYVDDVAEAIAQSVENPGKHGGKTYELGGPEKLSMIEINRRIA 262
Query: 238 DTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297
D R ++ +P V+ A L P D+ + + S +
Sbjct: 263 DAQRRKRTFLPMPDGVSATFAA-----LPGTP--------MGSDQWDLLKQGNVASGDYP 309
Query: 298 TFQDLGIVPHKLKGYPTEYLIWYRKGG 324
F+ GI P L + +++ +RK G
Sbjct: 310 GFEKFGIEPKPLGLFLDKWMTRFRKHG 336
>gi|402577867|gb|EJW71823.1| hypothetical protein WUBG_17270, partial [Wuchereria bancrofti]
Length = 149
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 90/133 (67%), Gaps = 1/133 (0%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP 64
+SG + TVFG TG LG+ ++ +LAK G Q+++P R R L++ G+LGQ++ + F
Sbjct: 8 FSGNVVTVFGCTGLLGKLLINRLAKEGHQIILPSRQEPYYTRQLRIYGELGQVLLLPFQL 67
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D+ +I+ + +NVV+NLIG YET+NYSFE+ + A RIA IAKE GI +FI +S
Sbjct: 68 KDEESIRQAIRYSNVVVNLIGARYETKNYSFEETHVEGARRIARIAKEM-GIQKFIHMSA 126
Query: 125 LGASSSSPSRVFS 137
+ AS ++P +F+
Sbjct: 127 MNASKNTPPTLFN 139
>gi|451941339|ref|YP_007461976.1| NADH-ubiquinone oxidoreductase [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451900726|gb|AGF75188.1| NADH-ubiquinone oxidoreductase [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 332
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 143/320 (44%), Gaps = 12/320 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GRYVV+ L K G +V + R C ++ +G++GQ +K + +
Sbjct: 13 LITVFGGSGFVGRYVVEALTKRGYRVRIAVR-CPQKAYYMLQIGEVGQTQMLKTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A + L G + SF+ + ++ + E G + + +S L A+
Sbjct: 72 SVARALLGAESAVFLPGSLAQANQSSFQTTQIDGTQNVSELTAEAG--IPLLYMSALVAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ K+ E+ V + P A IMRP+ + G ED N A F PLFG G
Sbjct: 130 ENASFLYARVKSMCEKIVQSKHPQAIIMRPSVIFGPEDCFFNTLANFSCFLPIMPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+++QPVY+ D+A V AL+ S GK Y+LGGP I T E + + +
Sbjct: 190 QSKLQPVYIGDIAEFVVRALEGQVLS-GKSYDLGGPQIVTFQNTLENILKIVHRKKTILS 248
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLGI 304
+P + +L + P L +I D IVS +N T + GI
Sbjct: 249 MPLSAGLLIGG----VLGTIGKLPLLPTLLTAHQIRFLQVDNIVSQEAIENGYTLEGAGI 304
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + YL +R G
Sbjct: 305 SPKTMAALLPSYLWRFRPQG 324
>gi|149928234|ref|ZP_01916478.1| NAD-dependent epimerase/dehydratase [Limnobacter sp. MED105]
gi|149823040|gb|EDM82281.1| NAD-dependent epimerase/dehydratase [Limnobacter sp. MED105]
Length = 317
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 149/308 (48%), Gaps = 25/308 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G +GFLG+ V QLAK G ++ VP R D +HL L QI+ + N D T+
Sbjct: 2 VIGGSGFLGQAVCNQLAKAGYRITVPTRR-YDKAKHL-LTLPTCQII--EANIHDRATLG 57
Query: 72 ATMAKANVVINLIGREYETRNYSFED---VNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ ++V+NL+G + + VNH + A G R + +S LG
Sbjct: 58 RLVSGQDIVVNLLGVLHSKPGKPYGQNFRVNHVEFPKALCTAMSKHGAKRIVHVSALGVG 117
Query: 129 SSSPSRVFSTKAAAE-EAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
+P+ ++ + EAV+++ L W TI+RP+ + G ED+ LN +A K F PL
Sbjct: 118 VQNPAPSMYLRSKTDGEAVVKDSGLAW-TILRPSVVFGREDKFLNTFASLAKIAPFIPLA 176
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G R QPV V DVA AV A ++D G ++ Y+L G +IFT+ EL +L + + P
Sbjct: 177 G-ADARFQPVSVSDVAKAVFACVEDQGKDTLHNTYDLVGTEIFTLKELVKLSARAVGKNP 235
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQ 300
+P AKA A E+ P L + D +++ D I + +++
Sbjct: 236 LVFGIPDVAAKAQAFLMEL--------APGEPLMSRDNVDSMKIDNIRTSGRTFPLPSYE 287
Query: 301 DLGIVPHK 308
L +V H+
Sbjct: 288 CLSVVAHE 295
>gi|395783672|ref|ZP_10463521.1| hypothetical protein ME3_00177 [Bartonella melophagi K-2C]
gi|395425794|gb|EJF91954.1| hypothetical protein ME3_00177 [Bartonella melophagi K-2C]
Length = 333
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 17/323 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR++V+ L K G +V V R + L++ G++GQ + + ++
Sbjct: 13 LITVFGGSGFVGRHIVETLTKQGYRVRVAVRYPQKAYYMLQV-GEVGQTQMLATDIKNRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ + A+ I L G + +F++ A+ +A ++ + + I +S L A+
Sbjct: 72 CVARALLGADGAIFLPGSLTQASQSNFQNAQIDGAKNVAELSAQAN--IPLIHMSTLIAN 129
Query: 129 SSSPSRVFS-TKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ S ++ K +E+ V P A IMRP+ + G ED N A + PLFG
Sbjct: 130 DENTSCSYAHVKFTSEQIVRHSHPQAIIMRPSVIFGPEDCFFNTLANLSRFSPIIPLFGG 189
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G +++QPVYV D+A V AL+ + GK Y+LGGP + T E + I +
Sbjct: 190 GQSKLQPVYVGDIAEFVARALEGK-VAFGKSYDLGGPVVMTFQNTVENVLKIIHRKKIVL 248
Query: 248 KVPFPVAKAVAMPREIL--LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----TFQD 301
+P + + IL + K+P P L D+I D IVS A+ +
Sbjct: 249 SMPLSIGLFIG---NILGNIGKIPL---LPELMTADQIRFLQIDNIVSQEAIKNGRILEG 302
Query: 302 LGIVPHKLKGYPTEYLIWYRKGG 324
+GI P + YL +R G
Sbjct: 303 VGITPKTMSAILPSYLWRFRPQG 325
>gi|323527660|ref|YP_004229813.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1001]
gi|323384662|gb|ADX56753.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1001]
Length = 317
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 149/312 (47%), Gaps = 24/312 (7%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+G ++V L +MG V + R + RHL L+ I ++ + D +
Sbjct: 7 AIIGGSGFIGSHLVNALVEMGKDVRIATRR-RYNARHLTLL----PIDVIETDVFDPVQL 61
Query: 71 KATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + VINL+G + R F + + RIA A E G+ R I +S LG
Sbjct: 62 ARFVEGTDCVINLVGTLHGKRRTPYGPEFARAHVELPTRIAA-ACEGKGVHRLIHLSALG 120
Query: 127 ASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S+ PS +K E+AV L W T+ RP+ + G ED+ LNK+A + F PL
Sbjct: 121 ADSNGPSMYSRSKGDGEKAVHAANLAW-TVFRPSVVFGPEDQFLNKFAFLQRIFPVIPL- 178
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ QPVYV DVA A+ L D + GK YELGGP ++T+ +L + D I +
Sbjct: 179 AMPDAKFQPVYVGDVAKAIVNVLDLDAAN-GKTYELGGPSVYTLEQLVKYCGDVIGRHAS 237
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+++P +A+ AM E+ P + D +++ D ++S +LGI
Sbjct: 238 IIRLPDALARMQAMTFEM--------APGEPVITRDNLDSMKVDNVLSRP--LAPELGIE 287
Query: 306 PHKLKGYPTEYL 317
P ++ YL
Sbjct: 288 PASIETIAPVYL 299
>gi|407715042|ref|YP_006835607.1| NADH dehydrogenase [Burkholderia phenoliruptrix BR3459a]
gi|407237226|gb|AFT87425.1| NADH dehydrogenase [Burkholderia phenoliruptrix BR3459a]
Length = 317
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 148/312 (47%), Gaps = 24/312 (7%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+G ++V L +MG V + R + RHL L+ I ++ + D +
Sbjct: 7 AIIGGSGFIGSHLVNALVEMGKDVRIATRR-RYNARHLTLL----PIDVIETDVFDPVQL 61
Query: 71 KATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + VINL+G + R F + + RIA A E G+ R I +S LG
Sbjct: 62 ARFVEGTDCVINLVGTLHGKRRTPYGPEFARAHVELPTRIAA-ACEGKGVHRLIHLSALG 120
Query: 127 ASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S PS +K E+AV L W T+ RP+ + G ED+ LNK+A + F PL
Sbjct: 121 ADSHGPSMYSRSKGDGEKAVHAANLAW-TVFRPSVVFGPEDQFLNKFAFLQRVFPVIPL- 178
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ QPVYV DVA A+ L D + GK YELGGP ++T+ +L + D I +
Sbjct: 179 AMPDAKFQPVYVGDVAKAIVNVLDLDAAN-GKTYELGGPSVYTLEQLVKYCGDVIGRHAS 237
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+++P +A+ AM E+ P + D +++ D ++S +LGI
Sbjct: 238 IIRLPDALARMQAMTLEM--------APGEPVITRDNLDSMKVDNVLSRP--LAPELGIE 287
Query: 306 PHKLKGYPTEYL 317
P ++ YL
Sbjct: 288 PASIETIAPVYL 299
>gi|341614076|ref|ZP_08700945.1| NADH ubiquinone oxidoreductase, putative [Citromicrobium sp.
JLT1363]
Length = 320
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 26/319 (8%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T+FG +GF+GR+V + L + ++V + R ED LK + LGQ+ + N D++
Sbjct: 11 VVTIFGGSGFVGRHVAEDLLQQNARVRIAARTPED-AFSLKPLAKLGQLQFARCNILDEH 69
Query: 69 TIKATMAKANVVINLIGREYETRNYSFE-DVNHFMAERIAGIAK--EHGGIMRFIQISCL 125
++ A + ++ V+NL+G +FE D+ M E +A+ + G F+QIS +
Sbjct: 70 SVCACVEGSHAVVNLVG--------TFEGDLMKLMGEAAGTLARAAKDAGAKSFVQISAI 121
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA PS KA EE V P ATI+RP+ + G + +L +A + F P+F
Sbjct: 122 GADIDGPSEYARAKALGEELVRDAFPEATILRPSIIFGPDGGILTMFADLISTFPVLPVF 181
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
S +Q V+V DVAAAV A+L D G+ YEL GPD +T+ EL + + + R
Sbjct: 182 APDSP-LQVVHVDDVAAAVAASLADPSAHAGETYELAGPDRWTMMELNQRIAEAQRRKRT 240
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
++ +P + A A L P + D+ + ++ F GI
Sbjct: 241 FLPMPDGASAAFAA-----LPGTP--------MSSDQWRMLKAGSVADGAYPGFAAFGIQ 287
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P L+ Y++ +RK G
Sbjct: 288 PRPLELVIDRYMVHHRKHG 306
>gi|295677990|ref|YP_003606514.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1002]
gi|295437833|gb|ADG17003.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1002]
Length = 317
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 14/258 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G Y+V L +MG V V R + RHL ++ I ++ + D +
Sbjct: 7 AVIGGSGFIGSYLVNSLVEMGKDVRVATR-RRYNARHLTML----PIDVLETDVFDPVQL 61
Query: 71 KATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ A+ VINL+G + + F + + RI A E G+ R I +S LG
Sbjct: 62 ARFVEGADCVINLVGILNGKRGKPYGREFAHAHVELPTRIVA-ACEGKGVHRLIHLSALG 120
Query: 127 ASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ PS +K E+AV + W TI RP+ + G ED LNK+A + F PL
Sbjct: 121 ANPGGPSMYARSKGDGEKAVHAANVAW-TIFRPSVVFGPEDAFLNKFAFLQRVFPAIPL- 178
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ QPVYV DVA A+ L DG S G+ YELGGP ++T+ +L D I ++
Sbjct: 179 AMPDAQFQPVYVGDVAKAIVNVLDMDGGS-GRTYELGGPTVYTLEDLVSYCGDVIGKHAR 237
Query: 246 YVKVPFPVAKAVAMPREI 263
+++P P+A+ A+ E+
Sbjct: 238 IIRLPEPLARLQALSFEL 255
>gi|163855208|ref|YP_001629506.1| NADH dehydrogenase [Bordetella petrii DSM 12804]
gi|163258936|emb|CAP41235.1| NADH dehydrogenase [Bordetella petrii]
Length = 306
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 150/316 (47%), Gaps = 28/316 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGFLGR++ +LA G ++VP R R L+L+ L + + + DD +
Sbjct: 5 LIGGTGFLGRHMAARLAGHGHVLIVPTRQYGRG-RDLQLLPTLTLV---EADVHDDAVLD 60
Query: 72 ATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ + + VINL G + R F V+ + +RIA + HG + R + +S LGA
Sbjct: 61 RLLRECDAVINLAGILHGGRGQPYGAGFARVHVQLPQRIAQACRRHG-VRRLLHVSALGA 119
Query: 128 SSSSPSRVFSTKAAAEEAVLRE--LPW----ATIMRPAAMIGTEDRLLNKWAQFVKKFNF 181
SS PS +K EA LRE W TI RP+ + G +D L +A+ +
Sbjct: 120 DSSGPSMYLRSKGDG-EAALREAYAAWPEGACTIFRPSVVFGPDDHLTTLFARLARWLPV 178
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
PL G R+QP+ V D+A A AAL + T+ G++Y+LGGP ++T+ E+ L
Sbjct: 179 IPLAG-ADARMQPISVSDIAFAAEAALGNPHTA-GRVYDLGGPQVYTLGEIVRLCAAWSG 236
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
+ +P + + A+ E LP L + D + + D + S A +
Sbjct: 237 HPRTVLPLPMGLGRLQALFFEC--------LPGDPLISRDNLASLAVDNVCS--APLDPE 286
Query: 302 LGIVPHKLKGYPTEYL 317
LGIVP ++ YL
Sbjct: 287 LGIVPTSMEAVVPGYL 302
>gi|209517334|ref|ZP_03266177.1| NADH dehydrogenase [Burkholderia sp. H160]
gi|209502217|gb|EEA02230.1| NADH dehydrogenase [Burkholderia sp. H160]
Length = 317
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G Y+V L +MG V + R + RHL ++ I ++ + D +
Sbjct: 7 AVIGGSGFIGSYLVNALVEMGKDVRLATRR-RYNARHLTML----PIDVLETDVSDPVQL 61
Query: 71 KATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ A+ V+NL+G R + F + + RI A E G+ R I +S LG
Sbjct: 62 ARFVEGADCVVNLVGILNGRRGKPYGQEFAHAHVELPTRIVA-ACEGKGVHRLIHLSALG 120
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A + PS +KA E+AV TI RP+ + G ED LNK+A + F PL
Sbjct: 121 ADPNGPSMYSRSKADGEKAVHAASVAWTIFRPSVVFGPEDAFLNKFAFLQRVFPVIPL-A 179
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+ QPVYV DVA A+ L D S G+ YELGGP ++T+ +L D I ++
Sbjct: 180 MPDAQFQPVYVGDVAKAIVNVLDLDDAS-GRTYELGGPTVYTLEDLVSYCGDVIGKHARI 238
Query: 247 VKVPFPVAKAVAMPREI 263
+++P P+A+ A+ E+
Sbjct: 239 IRLPEPLARLQALSFEM 255
>gi|302504489|ref|XP_003014203.1| hypothetical protein ARB_07508 [Arthroderma benhamiae CBS 112371]
gi|291177771|gb|EFE33563.1| hypothetical protein ARB_07508 [Arthroderma benhamiae CBS 112371]
Length = 572
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 147/316 (46%), Gaps = 34/316 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIV---PMKFNP---- 64
F G + R + A+ G V+VP+R E RHLK+ GDLG++V M+ P
Sbjct: 125 TFANVGIVTRSSLG--ARQGCTVIVPYRE-EMTKRHLKVTGDLGRVVFMVCMRNTPIGIY 181
Query: 65 --RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
+D+ T A N N+S+ED++ ERI ++ + R++ +
Sbjct: 182 YLLNDSNRNMTSATPN--------RSRRANFSYEDIHVEGTERIVESVAKYD-VDRYVHV 232
Query: 123 SCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
S AS SPS F TKA E P TI+RPA M G EDRLL++ A F
Sbjct: 233 SSYNASLDSPSEFFRTKAQGENVARSIFPETTIVRPAPMFGFEDRLLHRLAGVTNIFTSN 292
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
+ R PV+ +DV A+ L ++ T+ + +EL GP ++ E++EL+ I +
Sbjct: 293 HM----QERYWPVHAIDVGRALEIMLMEEWTT-AQTFELYGPKNYSTKEISELVDREIIK 347
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
++ VP KA+ P L ++ L P + + DE+ D + A TF+DL
Sbjct: 348 KRRHINVP----KAIMKPAAYWLNRL---LWWP-ITSADEVEREFIDQQIDPTAKTFKDL 399
Query: 303 GIVPHKLKGYPTEYLI 318
GI P L YL+
Sbjct: 400 GIEPTDLNTLTFHYLV 415
>gi|399019146|ref|ZP_10721295.1| putative nucleoside-diphosphate sugar epimerase [Herbaspirillum sp.
CF444]
gi|398098293|gb|EJL88580.1| putative nucleoside-diphosphate sugar epimerase [Herbaspirillum sp.
CF444]
Length = 322
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 150/318 (47%), Gaps = 33/318 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G VV QLA+ S+V+VP R E +HL +M + ++ + D+ +
Sbjct: 8 VIGGSGFIGSQVVAQLARTTASRVVVPTRRYERS-KHLLVMPTVRTVIA---DVHDETAL 63
Query: 71 KATMAKANVVINLIGREYETRNYS-------FEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
A + V+NL+G + F + + +I K HG + R++ +S
Sbjct: 64 DALFDGIDAVVNLVGILHSRSGPGGSAYGPDFLQAHVDLPRKIVAACKRHG-VRRYLHMS 122
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWA-TIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
LGAS+ PS +KAA E A + A T+ RP+ + G DR LN +A K+F
Sbjct: 123 ALGASAQGPSMYLRSKAAGEAAAFADSDIATTVFRPSVVFGEADRFLNMFAALQKRFPLM 182
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
PL G + QPVYV DVA A AAL+ + TS GK YEL GP I+T+ +L +L
Sbjct: 183 PL-GGADAKFQPVYVGDVAQAFVAALQHESTS-GKTYELAGPKIYTLRQLVQLAGI---- 236
Query: 243 YPHYVKVPFPVAK---AVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299
Y P PV A+A + L+ +P + + D + + D I
Sbjct: 237 ---YSGHPRPVVGLPPALASLQAFCLEHLPGR-----MMSRDNLASMQVDNIAGGPMAA- 287
Query: 300 QDLGIVPHKLKGYPTEYL 317
+LGI P L+ YL
Sbjct: 288 -ELGITPTALEAIAPRYL 304
>gi|418056603|ref|ZP_12694655.1| NAD-dependent epimerase/dehydratase [Hyphomicrobium denitrificans
1NES1]
gi|353209220|gb|EHB74625.1| NAD-dependent epimerase/dehydratase [Hyphomicrobium denitrificans
1NES1]
Length = 324
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 16/279 (5%)
Query: 21 RYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80
R +V LA+ +V R D +L+ MG +GQI ++ N R ++I + A V
Sbjct: 19 RQIVWSLARREYRVRAAVR-RPDLAGYLQPMGVVGQIHAVQSNLRFADSIVRAVDGAETV 77
Query: 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKA 140
IN +G +FE V+ A R+A A+E G R I +S +GA S SR TKA
Sbjct: 78 INSVGILAPVGAQTFEAVHVEGARRVAKAAREAGA-QRLIHVSAIGADQHSNSRYAVTKA 136
Query: 141 AAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDV 200
E AVL E P A I+RP+ + G ED+ N++A + PL G G T+ QP++V DV
Sbjct: 137 EGEAAVLAEFPSAIILRPSIVFGPEDQFFNRFAALARISPVLPLVGGGRTKFQPIFVGDV 196
Query: 201 AAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMP 260
A G IYELGGP + T ++ E + VPF + + A+
Sbjct: 197 GEAAANVAAGA-GKPGTIYELGGPQVVTFRDILEATLRYTGRRRLLLPVPFWLMRFQAL- 254
Query: 261 REILLKKVPFPLP---RPGLFNLDEINAYTSDTIVSDNA 296
+ +PLP RP +D++ D +VS+ A
Sbjct: 255 -------LTWPLPNSVRP--ITVDQLRLLKLDNVVSEAA 284
>gi|393218131|gb|EJD03619.1| NAD-binding protein [Fomitiporia mediterranea MF3/22]
Length = 320
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 145/306 (47%), Gaps = 44/306 (14%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL---------------MGDLGQ 56
V GFLG Y+ + +A + L PRH++L +GD
Sbjct: 6 VICGAGFLGSYIAKAIAASSTTKL---------PRHIQLTSRKPDSLYNKLQPGIGDGKM 56
Query: 57 IVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGI 116
+ + + +T+K+ ANVV++L+G + T FE++ A +A AK HG
Sbjct: 57 LSAVPADITKPDTLKSAFEGANVVVSLVGVLHGTPKM-FEEIQWKGAGNVAQAAKFHGA- 114
Query: 117 MRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFV 176
+ I S +GA SS TKA E AV ATI+RP+ + G D ++A
Sbjct: 115 -KIIHFSAIGADESSHIPYARTKALGENAVREICSDATIIRPSLVFGPGDGFFARFATLS 173
Query: 177 KKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSM----GKIYELGGPDIFTVHEL 232
F P+FG G+T+ QPVY D+A AV A + + +M GK++E GGPDIFT E+
Sbjct: 174 TFLPFMPVFGGGTTKFQPVYAGDIARAVEIASRSEDQAMKATSGKVFEAGGPDIFTYKEM 233
Query: 233 AELMYD-TIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSD 289
L+ T R P + +P+ V K + ++L+++P P + L D++ D
Sbjct: 234 MRLVLKYTGRRRP-ILSLPYAVGKM----QGLVLEQLP-----PNVLTLTRDQVEQLKID 283
Query: 290 TIVSDN 295
IV+ +
Sbjct: 284 NIVNTS 289
>gi|88607789|ref|YP_505813.1| NADH-ubiquinone oxidoreductase family protein [Anaplasma
phagocytophilum HZ]
gi|88598852|gb|ABD44322.1| NADH-ubiquinone oxidoreductase family protein [Anaplasma
phagocytophilum HZ]
Length = 313
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 150/313 (47%), Gaps = 22/313 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
VFG +GF+GRY+V +L V V R E R LKL G LGQ+ + D I+
Sbjct: 6 VFGGSGFIGRYLVCELVARKYSVTVYTRNHEKAAR-LKLFGRLGQVDIVCGKLSDAALIQ 64
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+A +V++NL+G + R + ++ IA +A +HG + F+ S +GA +
Sbjct: 65 KLIADCDVIVNLVGTISDPRGAVLQYLHVTFPSNIAKLATKHGKM--FVHFSAMGADIAK 122
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S +K E+ + A I+RP + G D NK+A + F PLFG G
Sbjct: 123 TSSYAQSKLEGEKRIRDVCEDAVILRPNLVFGDGDNFFNKFANLARVAPFMPLFGGGKNL 182
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE-LMYDTIREYPHYVKVP 250
+QPV+V DV + + +S YE+ GP ++++ +L + ++ T R+ P + +P
Sbjct: 183 LQPVHVDDVVNVAMDLIVNQASS--GTYEVAGPTVYSLKDLIKFVLVATGRKKP-MLSIP 239
Query: 251 FPVAKAVAMPREILLKKVPFPL-PRPG----LFNLDEINAYTSDTIVSDN------ALTF 299
+AK +A EI K V F L P G + D+I D I+ D+ T
Sbjct: 240 SKMAKFIAYICEI--KIVSFILQPATGSSEPIVTRDQIELMKYDIILPDSNNVRKGKTTI 297
Query: 300 QDLGIVPHKLKGY 312
++ IVP LK Y
Sbjct: 298 EE--IVPEYLKIY 308
>gi|375107792|ref|ZP_09754053.1| nucleoside-diphosphate-sugar epimerase [Burkholderiales bacterium
JOSHI_001]
gi|374668523|gb|EHR73308.1| nucleoside-diphosphate-sugar epimerase [Burkholderiales bacterium
JOSHI_001]
Length = 322
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 149/307 (48%), Gaps = 26/307 (8%)
Query: 12 VFGTTGFLGR-YVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
V G TGF+GR + V+ A +G+ Q++VP R + + L + ++ +DD
Sbjct: 7 VLGGTGFVGRAFAVRAAATVGTALQLVVPTRRLASG----QALRSLPTVQLLQARVQDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ V+NL+ R FE V+ + +R+A A G+ R + +S LG
Sbjct: 63 DLRRVLQGADAVVNLVA-ILHGREADFEQVHVTLPQRLAA-ACAAVGVRRLVHVSALGVG 120
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWA------TIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
+PS +KA E AVL++ T++RP+ + G EDR LN +A F
Sbjct: 121 LQAPSMYLRSKARGE-AVLQQAAAGAGGLELTLLRPSVIFGAEDRFLNLFAALQAVFPVM 179
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
PL G G+ ++QPV+V DVA A+ L D T +GK +++ GP ++T+ +L +L
Sbjct: 180 PLGGAGA-QLQPVWVGDVAQALLQCLADRAT-VGKTFDIAGPQVYTLAQLVKLAGARTGR 237
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
+ + +P P+A+ A+ E +P L + D + + + S DL
Sbjct: 238 HRPVLPLPAPLARLQALTLEF--------MPGGPLMSRDNLASLQVPNVASGTLPGLADL 289
Query: 303 GIVPHKL 309
GI H +
Sbjct: 290 GIEAHSI 296
>gi|358639312|dbj|BAL26609.1| NAD-dependent epimerase/dehydratase [Azoarcus sp. KH32C]
Length = 321
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 144/311 (46%), Gaps = 23/311 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G +GF+GR V +L + V+VP R R L L L + ++ + D+ T++
Sbjct: 8 LIGGSGFVGRAVANRLTEANIDVIVPTRHAARA-RDLTL---LPTVEVVQADVHDEATLR 63
Query: 72 ATMAKANVVINLIGREYETRNYSF-EDVNHFMAERIAGIAKEHGG--IMRFIQISCLGAS 128
+ + V+NL+G + + D E I G + R + IS LGAS
Sbjct: 64 SLFDGVDAVVNLVGILHSRSGSPYGPDFARAHVELPRKIVAACGAMSVPRLVHISALGAS 123
Query: 129 SSSPSRVFSTKAAAEEAVLR--ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
+ PS +KAA E+A+ P T++RP+ + G ED LN +AQ K PL G
Sbjct: 124 PTGPSEYLRSKAAGEDAIRSAGHAPAWTVLRPSVIFGREDHFLNLFAQLACKLPVLPLAG 183
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
T QPVYV DVA V L D +S G+ YEL GP + +HEL E Y
Sbjct: 184 -AHTLFQPVYVGDVAEVVWRCLADP-SSAGQTYELAGPTVHALHELVE--YVAALAGCRV 239
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ VP P + +AM + L++ P P + + D + + D++ S L F G+ P
Sbjct: 240 LVVPQP--EPLAMLQARLMELSPNP-----IMSRDNVRSLRIDSVASGAPLPF---GLTP 289
Query: 307 HKLKGYPTEYL 317
++ Y+
Sbjct: 290 SSVEAVAPSYI 300
>gi|115646184|gb|ABJ16967.1| IP02858p [Drosophila melanogaster]
Length = 324
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+I+ + +NVVINL+GR++ET+N+ F+DV+ AERIA IA+E G+ R I +S L
Sbjct: 33 SIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIARE-AGVERLIHLSSLNVE 91
Query: 129 SSSP-------SRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-FVKKFN 180
++ S +K E V P ATI+RPA + G+EDR L +A + ++F
Sbjct: 92 ANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFR 151
Query: 181 FFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
PL+ G + QPVYV DVA A+ A KD S G+IY+ GP + + EL + +
Sbjct: 152 SMPLWHKGEKTVKQPVYVSDVAQAIINAAKDP-DSAGRIYQAVGPKRYQLSELVDWFHRL 210
Query: 240 IRE 242
+R+
Sbjct: 211 MRK 213
>gi|218679775|ref|ZP_03527672.1| putative NADH-ubiquinone oxidoreductase subunit [Rhizobium etli
CIAT 894]
Length = 217
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 105/214 (49%), Gaps = 7/214 (3%)
Query: 60 MKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRF 119
M+ N R ++I + A+ V+N +G +ET +F+ V F A +A A+ G +
Sbjct: 1 MQANLRYRSSIDRAVDGASHVVNCVGILHETGRNTFDAVQEFGARAVAEAARNAGATL-- 58
Query: 120 IQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKF 179
IS +GA + S S TK AE A+ A I RP+ + G ED NK+A +
Sbjct: 59 THISAIGADAKSASDYGRTKGRAEAAIHSIKSDAVIFRPSIVFGPEDSFFNKFADMARMS 118
Query: 180 NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
PL G G T+ QPVYV DVA AV A+ D + GK+YELGGP++ + E E M
Sbjct: 119 PILPLVGGGKTKFQPVYVEDVAEAVARAV-DGKVAGGKVYELGGPEVLSFRECLEAMLKV 177
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLP 273
V +PF VA + + +PF P
Sbjct: 178 TSRKNPLVSLPFGVASMIGS----IASLIPFITP 207
>gi|58040279|ref|YP_192243.1| oxidoreductase [Gluconobacter oxydans 621H]
gi|58002693|gb|AAW61587.1| Putative oxidoreductase [Gluconobacter oxydans 621H]
Length = 340
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 140/312 (44%), Gaps = 17/312 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G + V G GF+GR +V +L G V V E D + GD G++ +K + D
Sbjct: 32 GRVVAVLGGGGFVGRELVGRLVASGHVVRVGSGNPEADQALARFPGD-GRVEFIKASVND 90
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
++++ + A+ INL+ + + + R+A + G+ +++ +S +G
Sbjct: 91 ADSLEHLFSGADAGINLV--SIMSPDVKAMHRVNVEGARLAALVARREGVEQYLHMSAIG 148
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
AS SP +K AE V P A ++RP+ + G ED N +A K P+F
Sbjct: 149 ASIQSPGNYGRSKGLAERVVREVFPEAALLRPSVIFGPEDSFFNMFALIAKLSPVLPVFA 208
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G R QPVYV DVA A A + + M E GGPD+ T+ EL + +
Sbjct: 209 AG-MRFQPVYVGDVARAAMALVTPERAGM--TVEAGGPDVLTMKELMAFVLEASGRRRFL 265
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPG-LFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ VP VAK A EIL P PG L D++ D +V A Q LGI
Sbjct: 266 LPVPDCVAKLEA---EIL-------EPLPGHLLTRDQVVMMGLDNVVQPGADDLQSLGIT 315
Query: 306 PHKLKGYPTEYL 317
P ++ +YL
Sbjct: 316 PTAMRSVVPDYL 327
>gi|403529962|ref|YP_006664491.1| NADH-ubiquinone oxidoreductase [Bartonella quintana RM-11]
gi|403232034|gb|AFR25777.1| NADH-ubiquinone oxidoreductase [Bartonella quintana RM-11]
Length = 332
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 143/320 (44%), Gaps = 12/320 (3%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R + L++ G++GQ +K + +
Sbjct: 13 LITVFGGSGFVGRHVVETLTKRGYRVRIAVRSPQKAYYMLQI-GEVGQTQMLKTDIKHRA 71
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G + F+ + ++ + E + I +S L A+
Sbjct: 72 SVARALLGAHGAVFLPGSLTQASQSDFQKTQIEGTQNVSELTAEAD--IPLIYMSTLVAN 129
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ K+ +E+ V + P A IMRP+ + G ED N A PLFG G
Sbjct: 130 QNASFLYARVKSMSEKIVHNKHPQAIIMRPSVIFGPEDCFFNTLANLSCFLPIIPLFGGG 189
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
++QPVYV D+A V AL++ GK Y+LGGP I T E + I +
Sbjct: 190 QNKLQPVYVSDIAEFVVRALEEQ-IVWGKSYDLGGPQIITFQNALENILKIIHRKKTILS 248
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDLGI 304
+P + + K+PF P L +I D IVS +N T + GI
Sbjct: 249 MPLSAGLFIGGLLGT-IGKLPFI---PTLITAAQIRFLQVDNIVSQEAIENGYTLEGAGI 304
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P + YL +R G
Sbjct: 305 TPRAMMALLPSYLWRFRPQG 324
>gi|426201155|gb|EKV51078.1| hypothetical protein AGABI2DRAFT_182062 [Agaricus bisporus var.
bisporus H97]
Length = 322
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 23/301 (7%)
Query: 16 TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP-------MKFNPRDDN 68
GFLG + +Q+A + R +L L + VP + + N
Sbjct: 10 AGFLGSNIARQIATAPKVNDITRRVQLSSRNPHRLHAKLEKEVPSHSLSPSIAVDVTKPN 69
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
T+ A V+++L+G + + F+++ AE +A AK+ G + + S +GA
Sbjct: 70 TLAPAFEGAKVIVSLVGLMHGSPQ-QFDEIQWHGAENVAYAAKQVGA--KLVHFSAIGAD 126
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S TK AE++VL P ATI+RP+ + G ED N++A+ + F P++G G
Sbjct: 127 AGSHIPYARTKGLAEKSVLEICPNATIIRPSLVFGPEDDFFNRFAKLARFLPFLPVYGGG 186
Query: 189 STRIQPVYVVDVAAAVTAALKDDGT----SMGKIYELGGPDIFTVHELAELMYDTIREYP 244
++R QPVYV D+A AV + D T GKI E GGPDIFT +L EL+ D
Sbjct: 187 TSRFQPVYVGDLARAVEIISRLDATIEKQVSGKITEAGGPDIFTFKQLMELVLDYSHRRR 246
Query: 245 HYVKVPFPVAKAVAMPREILLKKVP---FPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
+ PF A + +L+K+P F + R + L + N T + ++ +F++
Sbjct: 247 PIISFPF----AFGYMQGAILEKLPVNLFTVTRAQVEQLRKDNIVTEEN--GESRFSFKN 300
Query: 302 L 302
L
Sbjct: 301 L 301
>gi|251772378|gb|EES52945.1| NAD-dependent epimerase/dehydratase [Leptospirillum
ferrodiazotrophum]
Length = 299
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 30/310 (9%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVP--MKFNPR 65
I V G TGF+GRY+ L G ++V + R D +P +F P
Sbjct: 8 IHAVIGGTGFVGRYLADALRNTGKARVRLLARKHPDS-------------LPPETEFYPI 54
Query: 66 DDNT---IKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
D + +K +++ANVV L G ETR S+E V+H A + + R + I
Sbjct: 55 DAVSGMGMKEGLSRANVVWYLPGILAETREQSYEMVHHQGVVNTLS-AVDQRSLRRIVHI 113
Query: 123 SCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
S +G + ++PS TKA EEA+ L TI+RP+ + G DR +N++ + +
Sbjct: 114 SAVGTAPNAPSAYHRTKARGEEALRNSLLPYTIVRPSLVFGKGDRSINQFLDIARLVHVL 173
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
P+ G G+ R+QP++ D+ A + + + ++GKIYE GGP I+T ++ E + ++
Sbjct: 174 PMIGPGTARVQPIFAGDL-ARLCVMIAERAETLGKIYEAGGPRIYTYRQMMETLKNSCHL 232
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
+ P + A A+ +++L LPRP D + SD + NA D
Sbjct: 233 KSPILGAPVAIMMASAVLQKLL-------LPRP-FLTPDVLRMALSDNVPDKNA-CVADF 283
Query: 303 GIVPHKLKGY 312
G+ L+ +
Sbjct: 284 GMTLLALEAW 293
>gi|332529567|ref|ZP_08405523.1| NAD-dependent epimerase/dehydratase [Hylemonella gracilis ATCC
19624]
gi|332040917|gb|EGI77287.1| NAD-dependent epimerase/dehydratase [Hylemonella gracilis ATCC
19624]
Length = 321
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 147/306 (48%), Gaps = 30/306 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR+V + L + G V V R E H + + L + ++ + D+ T++
Sbjct: 6 VLGGTGFVGRHVCEHLVRRGCGVTVLTRRAE----HARAVQHLPGLSVLEGDVHDEATLR 61
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS--- 128
+ + V+NL+ + +FE H R A + R I IS LGA+
Sbjct: 62 RLLPGHDAVVNLVAILHGG-TAAFERA-HVKLPRTLARASLASDVRRVIHISALGAAPET 119
Query: 129 -SSSPSRVFSTKAAAEEAVLRELPWA-----TIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
+S+PSR +K+ E AVLRE + T++RP+ + G++DR LN +A+ + F
Sbjct: 120 AASAPSRYLRSKSQGE-AVLREAADSNGLQLTVLRPSVIFGSDDRFLNLFAELQRIFPLV 178
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
PL G R QPV+V DVA AVT L D T +G+ YEL GP + ++ EL +L +
Sbjct: 179 PLAG-AQARFQPVWVEDVAEAVTRCLFDPRT-VGQTYELCGPSVHSLRELVQLAGRS--- 233
Query: 243 YPHYVKVPFPVAKAVAMPREI--LLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
VP PV +A+P + L V P L + D +++ + +
Sbjct: 234 ----AGVPRPV---IALPPLLGRLQAMVMECAPGEPLMSRDNLDSMKVSNVATGQLPGLD 286
Query: 301 DLGIVP 306
LGI P
Sbjct: 287 ALGITP 292
>gi|421485505|ref|ZP_15933064.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
piechaudii HLE]
gi|400196424|gb|EJO29401.1| NAD dependent epimerase/dehydratase family protein 3 [Achromobacter
piechaudii HLE]
Length = 302
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 144/319 (45%), Gaps = 34/319 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP----MKFNPRDD 67
+ G TGF+GR+++ +L+ Q++VP R L G Q+ P ++ + DD
Sbjct: 5 IIGGTGFIGRHLIARLSGGLHQMIVPTR--------LLARGSELQVFPTVTLVQTDIHDD 56
Query: 68 NTIKATMAKANVVINLIGREY----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
+ + +VV+NL+G + + F + + +RIA + G + R + +S
Sbjct: 57 AALDGLVRGCDVVVNLVGILHGNIGKPYGSDFARAHVLLPQRIAQACRRQG-VHRLLHVS 115
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWA-----TIMRPAAMIGTEDRLLNKWAQFVKK 178
LGA S S +K E A+ E A TI RP+ + G +D+ N +A +
Sbjct: 116 ALGADSQGDSMYQRSKGDGEAAIKHEFQAASEGGWTIFRPSVLFGPDDKFTNMFATLARW 175
Query: 179 FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD 238
PL G R+QPVYV DV A+ +AL D T GK YELGGP ++T+ E+A L
Sbjct: 176 LPVLPLAG-AHVRMQPVYVGDVVEAMMSALGDTHTC-GKTYELGGPQVYTLGEIARLCAA 233
Query: 239 TIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
+ +P V + A E LP L + D +++ D I +
Sbjct: 234 WSGHPRPVISMPMGVGRIQARLFEC--------LPGKPLMSRDNLDSLRRDNICAGP--I 283
Query: 299 FQDLGIVPHKLKGYPTEYL 317
+L +VP L+ YL
Sbjct: 284 APELHVVPTGLEAVAPRYL 302
>gi|187925707|ref|YP_001897349.1| NADH dehydrogenase [Burkholderia phytofirmans PsJN]
gi|187716901|gb|ACD18125.1| NADH dehydrogenase [Burkholderia phytofirmans PsJN]
Length = 317
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 150/312 (48%), Gaps = 24/312 (7%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+G ++V L +MG V + R + RHL L+ I ++ + D +
Sbjct: 7 AIIGGSGFIGSHLVNALVEMGKDVRIATRR-RYNARHLTLL----PIDVIEADVFDPVQL 61
Query: 71 KATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ A+ VINL+ + R F ++ + +I A E G+ R + IS LG
Sbjct: 62 ARFVEGADCVINLVATLHGKRGTPYGPEFARMHVELPTKIVA-ACEGKGVHRLLHISALG 120
Query: 127 ASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A + PS +K E+AV L W TI RP+ + G ED+ LNK+A + F PL
Sbjct: 121 ADPNGPSMYTRSKGDGEKAVHAANLAW-TIFRPSVVFGPEDQFLNKFAVLQRMFPVIPL- 178
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ QPVYV DVA A+ L D S G+ YELGGP ++++ EL + D I ++
Sbjct: 179 AMPDAKFQPVYVGDVAKAIVNVLDLDAAS-GRTYELGGPTVYSLEELVKYCGDVIGKHAR 237
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+++P +A+ A+ E+ P + + D +++ D ++S +LGI
Sbjct: 238 IIRLPEALARLQALTFEM--------APGEPVISRDNLDSMKVDNVLS--GPLAPELGIE 287
Query: 306 PHKLKGYPTEYL 317
P ++ YL
Sbjct: 288 PASIEAIAPIYL 299
>gi|58259475|ref|XP_567150.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57223287|gb|AAW41331.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 375
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 145/304 (47%), Gaps = 32/304 (10%)
Query: 17 GFLGRYVVQQL-AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMK----FNPRDDNTIK 71
GFLG YVV+ L A +++ + R + L +G QI+P +P + ++
Sbjct: 28 GFLGSYVVKALIADPRNRIQIVSRHPQSLHSKLSTLG--AQILPPASVDITSPSSTSELR 85
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
A+ V++L G + + + + A R+ A E G + R + +S +GA
Sbjct: 86 KAFKGASAVVSLAGLLVGS-DKQMKALQEDGARRVGEAASEEG-VGRVVGVSAIGADLRG 143
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
+ + TKA E+A+ P ATI+RP+ + G D +++A K F P+FG G TR
Sbjct: 144 VTAYWRTKAKGEDAIREYHPTATIIRPSLLFGPGDSFFSRFATLAKYLPFLPVFGGGITR 203
Query: 192 IQPVYVVDVAAAVTAALKDD----GTSMGKIYELGGPDIFTVHELAELM--YDTIREYPH 245
QPVYV DVA AV +DD G+I E GGPDIFT E+ EL+ Y +
Sbjct: 204 FQPVYVGDVARAVEICCRDDPIVVSQVAGRIIEAGGPDIFTYREMMELVLRYTHLEGRRA 263
Query: 246 YVKVPFPVAKAVAMPREILLKKVP---FPLPRPGLFNLDEINAYTSDTIVSDN----ALT 298
+ +P+ + + L+K+P F + R D++ +D IVS + A
Sbjct: 264 IISLPYWLGSV----QGFFLEKLPETMFTVTR------DQVKQLRNDNIVSPHPPMFAQN 313
Query: 299 FQDL 302
F+DL
Sbjct: 314 FEDL 317
>gi|253998182|ref|YP_003050245.1| NAD-dependent epimerase/dehydratase [Methylovorus glucosetrophus
SIP3-4]
gi|253984861|gb|ACT49718.1| NAD-dependent epimerase/dehydratase [Methylovorus glucosetrophus
SIP3-4]
Length = 315
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 9/224 (4%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G +V +L+ G V V R E +HL L+ ++ Q+V + + DD +
Sbjct: 7 CVLGGSGFVGSAIVHRLSAAGYLVKVLTRRREAS-KHLILLPNV-QVV--ECDVMDDQAL 62
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ + + VINLIG +E+R SFE ++ + R+ + + G + R + +S L A+
Sbjct: 63 RTHLTGCDGVINLIGILHESRKASFEAMHAELPSRLVQLCVKLG-VCRLLHMSALQAAPD 121
Query: 131 SPSRVFSTKAAAEEAVLRELPW--ATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+PS +KA E AVL TI RP+ + G D LN +A VK L
Sbjct: 122 APSAYLRSKAKGEAAVLANADRLNVTIFRPSVIFGRNDSFLNLFASLVKLMPVVAL-AKP 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHEL 232
R QPV+V DVA A T A+ ++ + G++YELGGP ++T+ EL
Sbjct: 181 QARFQPVWVEDVAQAFTNAI-ENAETFGQVYELGGPRVYTMKEL 223
>gi|87201093|ref|YP_498350.1| NAD-dependent epimerase/dehydratase [Novosphingobium
aromaticivorans DSM 12444]
gi|87136774|gb|ABD27516.1| NAD-dependent epimerase/dehydratase [Novosphingobium
aromaticivorans DSM 12444]
Length = 310
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 30/324 (9%)
Query: 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNP 64
++ + G TGF G ++ Q+L G+++ V C P LK +G LGQI + +
Sbjct: 1 MLVALVGGTGFFGTHLAQELLARGARLRV----CSRHPERAFRLKPLGTLGQIQFVATDV 56
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFE-DVNHFMAERIAGIAKEHGGIMR--FIQ 121
T+ A + + V+NL+G +F D++ E +A +A+ F+
Sbjct: 57 TKPRTVAAALTGVDAVVNLVG--------AFSGDLDSLQGEGVARVAEAAKAGGAKAFVH 108
Query: 122 ISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF 181
+S LGA + S TKA E+A L P AT++RP+ + G +D LN + + K
Sbjct: 109 VSALGADAGSDVAYARTKAEGEKAALAAFPTATVVRPSILFGEDDNFLNMFGGLMAKLPV 168
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
P+FG + ++QPV+V D A AV AL D G+ YEL GP++ T+ EL +
Sbjct: 169 LPVFGP-TAQLQPVFVDDAAEAVANALADPRAHGGRTYELAGPEVVTMGELNRRIARAAD 227
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
P +++P V+ A A L +P P+ R D+ + + S +
Sbjct: 228 RSPMLIELPDEVSGAFAA----LTGWLPGAPMSR------DQWKLLKAGNVASGTLPGIE 277
Query: 301 DLGIVPHKLKGYPTEYLIWYRKGG 324
LG+ P + + ++ +RK G
Sbjct: 278 ALGVTPRPMGLFLDRWMTRFRKFG 301
>gi|313200252|ref|YP_004038910.1| nad-dependent epimerase/dehydratase [Methylovorus sp. MP688]
gi|312439568|gb|ADQ83674.1| NAD-dependent epimerase/dehydratase [Methylovorus sp. MP688]
Length = 315
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 9/224 (4%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G +V +L+ G V V R E +HL L+ ++ Q+V + + DD +
Sbjct: 7 CVLGGSGFVGSAIVHRLSAAGYLVKVLTRRREAS-KHLILLPNV-QVV--ECDVMDDQAL 62
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ + + VINLIG +E+R SFE ++ + R+ + + G + R + +S L A+
Sbjct: 63 RTHLTGCDGVINLIGILHESRKASFEAMHAELPSRLVQLCVKLG-VCRLLHMSALQAAPD 121
Query: 131 SPSRVFSTKAAAEEAVLRELPW--ATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+PS +KA E AVL TI RP+ + G D LN +A VK L
Sbjct: 122 APSAYLRSKAKGEAAVLANADRLNVTIFRPSVIFGRNDSFLNLFASLVKLMPVVAL-AKP 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHEL 232
R QPV+V DVA A T A+ ++ + G++YELGGP ++T+ EL
Sbjct: 181 QARFQPVWVEDVAQAFTNAV-ENAETFGQVYELGGPRVYTMKEL 223
>gi|121602183|ref|YP_989600.1| NAD dependent epimerase/dehydratase family protein [Bartonella
bacilliformis KC583]
gi|421761399|ref|ZP_16198201.1| NAD dependent epimerase/dehydratase family protein [Bartonella
bacilliformis INS]
gi|120614360|gb|ABM44961.1| NAD dependent epimerase/dehydratase family protein [Bartonella
bacilliformis KC583]
gi|411172864|gb|EKS42914.1| NAD dependent epimerase/dehydratase family protein [Bartonella
bacilliformis INS]
Length = 332
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 149/326 (45%), Gaps = 24/326 (7%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V V R P+ M +G++ + D
Sbjct: 13 LITVFGGSGFVGRHVVEALTKRGYRVRVAVR----RPQRAYYMLQIGEVSQTQMCT-TDV 67
Query: 69 TIKATMAKA----NVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
T +A++A+A + V+ L G ++ F+ +A +A++ G + I S
Sbjct: 68 TNRASVARALSGADGVVFLPGSLAQSNQSKFQTTQIDGTTNVAELAQKAG--IPLIYAST 125
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L A ++ K E+ V + IMRP+ + G EDR N A+ P+
Sbjct: 126 LIAHENASLLYARVKFMCEKIVQDKHSQTIIMRPSVIFGPEDRFFNVLAKASCFLPIMPV 185
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
FG G ++QP+YV D+A V AL++ G YELGGP + TV + E + I
Sbjct: 186 FGGGHNKLQPIYVGDIAEFVVRALEEK-IPFGNSYELGGPTVITVRHIIENILKIIHRKK 244
Query: 245 HYVKVPFPVAKAVAMPREIL--LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL----T 298
+ +P V V +IL + K+P P L D+I + IVS A+ T
Sbjct: 245 TILSMPLSVGLCVG---DILGIIGKLPL---LPTLTTADQIRFLQLNNIVSQKAIDSGYT 298
Query: 299 FQDLGIVPHKLKGYPTEYLIWYRKGG 324
+ +GI P + YL +R G
Sbjct: 299 LEGVGITPKTMASILPSYLWHFRPQG 324
>gi|134106435|ref|XP_778228.1| hypothetical protein CNBA2280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260931|gb|EAL23581.1| hypothetical protein CNBA2280 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 375
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 144/304 (47%), Gaps = 32/304 (10%)
Query: 17 GFLGRYVVQQL-AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMK----FNPRDDNTIK 71
GFLG YVV+ L A +++ + R + L +G QI+P +P + ++
Sbjct: 28 GFLGSYVVKALIADPRNRIQIVSRHPQSLHSKLSTLG--AQILPPASVDITSPSSTSELR 85
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
A+ V++L G + + + A R+ A E G + R + +S +GA
Sbjct: 86 KAFKGASAVVSLAGL-LVGNDKQMKALQEDGARRVGEAASEEG-VGRVVGVSAIGADLRG 143
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
+ + TKA E+A+ P ATI+RP+ + G D +++A K F P+FG G TR
Sbjct: 144 VTAYWRTKAKGEDAIREYHPTATIIRPSLLFGPGDSFFSRFATLAKYLPFLPVFGGGITR 203
Query: 192 IQPVYVVDVAAAVTAALKDD----GTSMGKIYELGGPDIFTVHELAELM--YDTIREYPH 245
QPVYV DVA AV +DD G+I E GGPDIFT E+ EL+ Y +
Sbjct: 204 FQPVYVGDVARAVEICCRDDPIVVSQVAGRIIEAGGPDIFTYREMMELVLRYTHLEGRRA 263
Query: 246 YVKVPFPVAKAVAMPREILLKKVP---FPLPRPGLFNLDEINAYTSDTIVSDN----ALT 298
+ +P+ + + L+K+P F + R D++ +D IVS + A
Sbjct: 264 IISLPYWLGSV----QGFFLEKLPETMFTVTR------DQVKQLRNDNIVSPHPPMFAQN 313
Query: 299 FQDL 302
F+DL
Sbjct: 314 FEDL 317
>gi|297539583|ref|YP_003675352.1| NAD-dependent epimerase/dehydratase [Methylotenera versatilis 301]
gi|297258930|gb|ADI30775.1| NAD-dependent epimerase/dehydratase [Methylotenera versatilis 301]
Length = 320
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 127/233 (54%), Gaps = 9/233 (3%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G +V +L G V V R D +HL L+ ++ Q+ N D ++
Sbjct: 12 CVLGGSGFVGSAIVAKLDAAGYSVKVLTRR-RDSAKHLFLLPNV-QVEECNVN--DYQSL 67
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ + A+VVINL+G +++R+ +F ++H + ++A I + I R I +S L A+ S
Sbjct: 68 NSALRGADVVINLLGILHQSRHSTFNAIHHQLPAQLAKICVDL-NIKRLIHMSSLKAAKS 126
Query: 131 SPSRVFSTKAAAEEAVL--RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+PS+ +K A E A+L + TI +P+ + G D +N +A +K +
Sbjct: 127 APSQYLRSKGAGEAALLEFQNQLNITIFQPSVIFGRGDSFINLFATLIKTLPVV-MLAKP 185
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
+ + QPV+V DVA+ A++ +D T G+IYEL GP I+T EL + + + ++
Sbjct: 186 NAKFQPVWVEDVASCFVASIANDAT-YGQIYELAGPKIYTFRELVKTVMNALQ 237
>gi|326386973|ref|ZP_08208585.1| NAD-dependent epimerase/dehydratase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208556|gb|EGD59361.1| NAD-dependent epimerase/dehydratase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 317
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 148/319 (46%), Gaps = 23/319 (7%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G + + G TGF G ++ Q+L G+++ V R + ++K +G+LG + + +
Sbjct: 11 GKVIALIGGTGFFGTHLAQELLDRGARLRVASR-HPSEGFNVKPLGNLGSVQIVAVDVTK 69
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+T++ + V+NL+G + + + A ++A IAK G F+ IS +G
Sbjct: 70 PHTLEVVFTGVDAVVNLVG----AFSGDLDAIQGRGAGQVAAIAKARGA-KAFVHISAIG 124
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A + S TKA E AVL P A I+RP+ + G +D LN + + K P+F
Sbjct: 125 ADAGSSVAYARTKAEGETAVLAAFPEAVILRPSVLFGVDDTFLNMFGGLM-KLPVLPVFA 183
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+++QP+ V D A A+ L GK YEL GP+ TV EL + P +
Sbjct: 184 P-ESQLQPLDVDDAAEAIGNVLAKPEAFAGKTYELAGPEALTVLELNRRIARATGRSPLF 242
Query: 247 VKVPFPVAKAVAMPREILLKKVPF-PLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ +A LL +PF P+ + D+ + + S + +DLG+
Sbjct: 243 WALSDGMAG--------LLAALPFTPI------SCDQYALLKNGSAASGSLPGIRDLGVH 288
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P L+ + +L+ YRK G
Sbjct: 289 PRPLELFLERWLVRYRKHG 307
>gi|321251752|ref|XP_003192168.1| hypothetical protein CGB_B3060C [Cryptococcus gattii WM276]
gi|317458636|gb|ADV20381.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 367
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 26/301 (8%)
Query: 17 GFLGRYVVQQL-AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMK----FNPRDDNTIK 71
GFLG YV + L A +++ + R + L +G QI+P +P ++
Sbjct: 28 GFLGSYVAKALIADPRNRIQIVSRHPQSLYSKLSTLGS--QILPPASIDITSPSSPLELR 85
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
T A+ V+++ G + + + + A+R+ A E G + R + IS +GA+
Sbjct: 86 KTFKGASAVVSMAGLLVGS-DKQMKALQEDGAKRVGEAAAEEG-VGRVVGISAIGANPQG 143
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
+ + TKA E+A+ P AT++RP+ + G D +++A K P+FG G TR
Sbjct: 144 ATAYWRTKAKGEDAIREYHPTATVIRPSLLFGPGDSFFSRFATLAKYLPVLPVFGGGFTR 203
Query: 192 IQPVYVVDVAAAVTAALKDD----GTSMGKIYELGGPDIFTVHELAELM--YDTIREYPH 245
QPVYV DVA AV +DD G G+I E GGPDI T E+ EL+ Y ++
Sbjct: 204 FQPVYVGDVARAVEICCRDDPTVVGQVAGRIIEAGGPDILTYREIMELVLRYTNLQGRRA 263
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN----ALTFQD 301
+ +P+ V E+L + + F L R D++ D IVS + F+D
Sbjct: 264 IISLPYWVGSVQGFVLEMLPETM-FTLTR------DQVTQLREDNIVSPHPPMFGQNFED 316
Query: 302 L 302
L
Sbjct: 317 L 317
>gi|217969135|ref|YP_002354369.1| NAD-dependent epimerase/dehydratase [Thauera sp. MZ1T]
gi|217506462|gb|ACK53473.1| NAD-dependent epimerase/dehydratase [Thauera sp. MZ1T]
Length = 318
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 30/322 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G +GF+G + +L K G +VL+P R H+ L+ ++ + + N D +
Sbjct: 8 IVGGSGFIGSAIANRLCKEGVKVLIPTRR-RSRAGHVLLLPNVEVV---EGNVHDVALLA 63
Query: 72 ATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
A+ V+N +G R F + + ++I + G+ R + IS LGA
Sbjct: 64 RLFEGADAVVNTVGVLHSRPGRPFGPDFARAHVELPQKIVAACRT-AGVPRLVHISALGA 122
Query: 128 SSSSPSRVFSTKAAAEEAVLR---ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
S PS +KAA E A+ E+ W TI++P+ + G D LN +A + F PL
Sbjct: 123 YSDGPSEYQRSKAAGETAIRTGSPEIAW-TILQPSVVFGRGDSFLNLFADLARMFPVLPL 181
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G + R QPVYV DVA AV +L D G+ ++L GP ++T+ +L E + + + P
Sbjct: 182 AG-ATARFQPVYVEDVAEAVWQSLTRDDAG-GQTFQLAGPTVYTLRQLVEYVSALVGK-P 238
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+ +P+++ +AM + L++ P P L + D + + D + S T Q G+
Sbjct: 239 RPI---YPLSEKLAMWQARLMELAPQP-----LMSRDNVRSMKVDNVASG---TPQPFGM 287
Query: 305 VPHKLKGYPTEYLIWYRKGGPK 326
VP L+ T W + P+
Sbjct: 288 VPTALE---TVAPAWLGQAAPR 306
>gi|49473715|ref|YP_031757.1| NADH-ubiquinone oxidoreductase [Bartonella quintana str. Toulouse]
gi|49239218|emb|CAF25537.1| hypothetical NADH-ubiquinone oxidoreductase [Bartonella quintana
str. Toulouse]
Length = 334
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 145/322 (45%), Gaps = 16/322 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ TVFG +GF+GR+VV+ L K G +V + R + L++ G++GQ +K + +
Sbjct: 15 LITVFGGSGFVGRHVVETLTKRGYRVRIAVRSPQKAYYMLQI-GEVGQTQMLKTDIKHRA 73
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A+ + L G + F+ + ++ + + + I +S L A+
Sbjct: 74 SVARALLGADGAVFLPGSLTQASQSDFKKTQIEGTQNVSELTAKAD--IPLIYMSTLIAN 131
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ K+ +E+ V + P A IMRP+ + G ED N A PLFG G
Sbjct: 132 QNASFLYARVKSMSEKIVHNKHPQAIIMRPSVIFGPEDCFFNTLANLSCFLPIIPLFGGG 191
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
++QPVYV D++ V AL++ GK Y+LGGP I T E + I +
Sbjct: 192 QNKLQPVYVSDISEFVVRALEEQ-IVWGKSYDLGGPQIITFQNALENILKIIHRKKTILS 250
Query: 249 VPFPVAKAVAMPREIL--LKKVPFPLPRPGLFNLDEINAYTSDTIVS----DNALTFQDL 302
+P + +L + K+PF P L +I D IVS +N T +
Sbjct: 251 MPLSAGLFIG---GLLGAIGKLPFI---PTLITAAQIRFLQVDNIVSQEAIENGYTLEGA 304
Query: 303 GIVPHKLKGYPTEYLIWYRKGG 324
GI P + YL +R G
Sbjct: 305 GITPRAMMALLPSYLWRFRPQG 326
>gi|409083786|gb|EKM84143.1| hypothetical protein AGABI1DRAFT_117579 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 322
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 143/308 (46%), Gaps = 23/308 (7%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP-------MK 61
+ V GFLG + +Q+A + R +L L + VP +
Sbjct: 3 LKIVVCGAGFLGSNIARQIATAPKVNDITRRVQLSSRNPHRLHAKLEREVPSHSLSPPIA 62
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
+ NT+ A V+++L+G F+++ AE +A AK+ G + +
Sbjct: 63 VDVTKPNTLAPAFEGAKVIVSLVGL-MRGSPQQFDEIQWHGAENVAYAAKQVGA--KLVH 119
Query: 122 ISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF 181
S +GA + S TK AE++VL P ATI+RP+ + G ED N++A+ + F
Sbjct: 120 FSAIGADAGSHIPYPRTKGLAEKSVLEICPNATIIRPSLVFGPEDDFFNRFAKLARFLPF 179
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT----SMGKIYELGGPDIFTVHELAELMY 237
P++ G++R QPVYV D+A AV + D T GK+ E GGPDIFT +L EL+
Sbjct: 180 LPVYDGGTSRFQPVYVGDLARAVEIISRLDATIEKQVSGKVIEAGGPDIFTFKQLMELVL 239
Query: 238 DTIREYPHYVKVPFPVAKAVAMPREILLKKVP---FPLPRPGLFNLDEINAYTSDTIVSD 294
D + PF A + +L+K+P F + R + L + N T + +
Sbjct: 240 DYSHRRRPIISFPF----AFGYMQGAILEKLPVNLFTVTRAQVEQLRKDNIVTEEN--GE 293
Query: 295 NALTFQDL 302
N +F++L
Sbjct: 294 NRFSFKNL 301
>gi|297721641|ref|NP_001173183.1| Os02g0800550 [Oryza sativa Japonica Group]
gi|255671319|dbj|BAH91912.1| Os02g0800550, partial [Oryza sativa Japonica Group]
Length = 72
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/69 (71%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Query: 109 IAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRL 168
++KEHGG MRFIQ+SCLGAS+SS SR+ KAA EE+VL+E P ATIMRPA MIGTEDR+
Sbjct: 4 VSKEHGGFMRFIQVSCLGASASS-SRMLRAKAAGEESVLKEFPEATIMRPATMIGTEDRI 62
Query: 169 LNKWAQFVK 177
LN+W QF K
Sbjct: 63 LNRWVQFAK 71
>gi|390604598|gb|EIN13989.1| NAD(P)-binding protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 311
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 139/293 (47%), Gaps = 17/293 (5%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQ---IVPMKFNPRDDN 68
V GFLG + + + + V H KL + + P+ + +
Sbjct: 6 VLCGAGFLGSRIAETIISSSASRAVQLASRHPSASHEKLGPNQHTDRLLAPVVVDITKPD 65
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
T+ + M A+VV++L+G + T +E + AE +A ++ G + I IS +GA
Sbjct: 66 TLVSAMKDASVVVSLVGIMHGTEQ-DYERIQWRGAENVAKATRQVGA--KLIHISAIGAD 122
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S TKA E+AVL P ATI+RP+ + G D ++A+ F P+FG G
Sbjct: 123 PESNIPYARTKALGEQAVLEACPDATIIRPSLVFGPGDSFYQRFARLSAFLPFLPVFGGG 182
Query: 189 STRIQPVYVVDVAAAV-TAALKDDGTS---MGKIYELGGPDIFTVHELAELMYDTIREYP 244
++R QPVY D+A AV A K+ T GKI E GGP++FT E+ + + D
Sbjct: 183 TSRFQPVYSGDIARAVEIIARKNPATESKVAGKIIEAGGPEVFTYKEIMQQVLDYSGRRR 242
Query: 245 HYVKVPFPVAKAVAMPREILLKKVP---FPLPRPGLFNLDEINAYTSDTIVSD 294
V +PF + + + +L+++P F + R + L N T+DT+ ++
Sbjct: 243 SIVSLPF----GIGIIQGAILERLPVNLFTVTRDQIKQLKFDNVTTNDTLFNE 291
>gi|254995467|ref|ZP_05277657.1| NADH-ubiquinone oxidoreductase, putative [Anaplasma marginale str.
Mississippi]
Length = 326
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 161/319 (50%), Gaps = 17/319 (5%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
VFG +GF+GR+VV L G V V R E R LKL+G+LGQ+ + + + I+
Sbjct: 15 VFGGSGFIGRHVVSSLVLRGYTVSVFTRNPEKAAR-LKLIGNLGQVQIVPGDLSNALLIE 73
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+A+ +V++NL+G R+ ++ + IA A +HG ++ + S + + +S
Sbjct: 74 KLLAECDVIVNLVGSMSPRRDV-LRYLHVTVPGNIAKFAGQHGKML--VHFSTMSSDVAS 130
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S ++K E V A I++P + G ED +K+A+ + F P+ G++
Sbjct: 131 SSFYATSKLEGENTVRSVCKDAVIVKPNLVFGDEDHFFSKFAKLARVLPFLPVVC-GNSM 189
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
+QPVYV +VA +A + +G GK E+ GP +++ EL + + T +++P
Sbjct: 190 VQPVYVGEVAELTSAIV--EGQETGKTLEVCGPKTYSMRELMQFILQTTARDKPVLELPT 247
Query: 252 PVAKAVAMPREILLKKVPF---PLPRPG--LFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+AKAVA E L+ V F PL G + D++ A +IV+D+ D+ ++
Sbjct: 248 VLAKAVAALCE--LRLVSFLLKPLTGDGEPILTTDQL-ALLKYSIVADST-AGSDVRVMA 303
Query: 307 HKLKG-YPTEYLIWYRKGG 324
++ P I+ ++GG
Sbjct: 304 QSIEDIMPGCLEIYKKRGG 322
>gi|186477647|ref|YP_001859117.1| NADH dehydrogenase [Burkholderia phymatum STM815]
gi|184194106|gb|ACC72071.1| NADH dehydrogenase [Burkholderia phymatum STM815]
Length = 318
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 21/288 (7%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G ++V L ++G V + R + RHL L+ I ++ + D +
Sbjct: 7 AVIGGSGFIGSHLVNALVEIGKTVRIATRR-RYNARHLTLL----PIDVVETDVFDPIQL 61
Query: 71 KATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ A+ V+NL+G R + F + + RI A E + R I +S +G
Sbjct: 62 ARFVEGADAVVNLVGVLHGRRGDPYGPEFAKAHVELPTRIVS-ACEGKSVHRLIHVSAIG 120
Query: 127 ASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A PS +K E A+ + +TI RP+ + G ED+ LNK+A + F PL
Sbjct: 121 ADPRGPSMYLRSKGDGERAIHASSMLASTIFRPSVVFGPEDQFLNKFAFLQRMFPVIPLA 180
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G+ R QP++V DVA A+ L D S G+ YELGGP ++T+ L E D I ++
Sbjct: 181 KAGA-RFQPIFVGDVAKAIVNVLDLD-ASTGRTYELGGPSVYTLEALVEYCGDVIGKHAR 238
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293
V++P +A+ A+ E+ P + + D +++ D ++S
Sbjct: 239 IVRLPDSLARLQALSFEL--------APGEPVLSRDNLDSMKIDAVLS 278
>gi|405117612|gb|AFR92387.1| NADH dehydrogenase [Cryptococcus neoformans var. grubii H99]
Length = 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 143/304 (47%), Gaps = 32/304 (10%)
Query: 17 GFLGRYVVQQL-AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMK----FNPRDDNTIK 71
GFLG YV + L A +++ + R + L +G QI+P + ++
Sbjct: 28 GFLGSYVAKALIADPRNRIQIVSRHPQSLHSKLSTLG--AQILPPASVDITSSSSVQELR 85
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
A+ V++L G + + + + A R+ A E G + R + IS +GA+
Sbjct: 86 KAFEGASAVVSLAGLLVGS-DKQMKALQEDGARRVGEAASEEG-VGRVVDISAIGANPQG 143
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
+ + TKA E+A+ P AT++RP+ + G D +++A K F P+FG G TR
Sbjct: 144 VTAYWRTKAKGEDAIREYHPTATVIRPSLLFGPGDSFFSRFATLAKYLPFLPVFGGGITR 203
Query: 192 IQPVYVVDVAAAVTAALKDD----GTSMGKIYELGGPDIFTVHELAELM--YDTIREYPH 245
QPVYV DVA AV +DD G+I E GGPDIFT E+ EL+ Y +
Sbjct: 204 FQPVYVGDVARAVEICCRDDPIVVSQVAGRIIEAGGPDIFTYREMMELVLRYTNLEGRRA 263
Query: 246 YVKVPFPVAKAVAMPREILLKKVP---FPLPRPGLFNLDEINAYTSDTIVSDN----ALT 298
V +P+ + + L+K+P F + R D++ +D IVS + A
Sbjct: 264 IVSLPYWLGSV----QGFFLEKLPETMFTVTR------DQVKQLRNDNIVSPHPPMFAQN 313
Query: 299 FQDL 302
F+DL
Sbjct: 314 FEDL 317
>gi|254455649|ref|ZP_05069078.1| probable NADH-ubiquinone oxireductase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082651|gb|EDZ60077.1| probable NADH-ubiquinone oxireductase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 309
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 14/304 (4%)
Query: 23 VVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82
++++L K +V V R +K + G I ++ N D+ I+A K ++ IN
Sbjct: 1 MIRKLTKNNYRVTVVTRNIHQKSYIIKTQANAGYIDIVEANIFDEKKIRALFKKTDICIN 60
Query: 83 LIGREYETRN-YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAA 141
LIG +E + +F++++ +A + KE+ + FI +S LG + + S +K
Sbjct: 61 LIGILFEQKKGNTFKNIHSIFPSLLAKLCKEYN-LKHFIHLSALGINDAVDSEYAKSKLE 119
Query: 142 AEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVA 201
E VL+ P ATI+RP+ + +D + + + FPL+ +G T+ P++ D+
Sbjct: 120 GENNVLKNFPLATILRPSIVYSVDDNFTTNFMTLLNRLPIFPLYYEGKTKFAPIHCSDLT 179
Query: 202 AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPR 261
+ + + S KI E GP+I + EL + + I + V P P+AK A
Sbjct: 180 DTINHIISKNIYS--KIIECTGPEIISFKELLQKLLYLINKKRILVPFPLPLAKFSARFF 237
Query: 262 EILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK-LKGYPTEYLIWY 320
E+ LP P L D++ D I S T ++GI + + +Y +
Sbjct: 238 EL--------LPNP-LLTSDQLRLLKYDNISSGKYKTNSEIGIPSVRYFEEEVKKYCYMW 288
Query: 321 RKGG 324
R+GG
Sbjct: 289 REGG 292
>gi|222475667|ref|YP_002564084.1| NADH-ubiquinone oxidoreductase [Anaplasma marginale str. Florida]
gi|255003659|ref|ZP_05278623.1| NADH-ubiquinone oxidoreductase, putative [Anaplasma marginale str.
Puerto Rico]
gi|255004783|ref|ZP_05279584.1| NADH-ubiquinone oxidoreductase, putative [Anaplasma marginale str.
Virginia]
gi|222419805|gb|ACM49828.1| NADH-ubiquinone oxidoreductase, putative [Anaplasma marginale str.
Florida]
Length = 326
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 161/319 (50%), Gaps = 17/319 (5%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
VFG +GF+GR+VV L G V V R E R LKL+G+LGQ+ + + + I+
Sbjct: 15 VFGGSGFIGRHVVSSLVLRGYTVSVFTRNPEKAAR-LKLIGNLGQVQIVPGDLSNALLIE 73
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+A+ +V++NL+G R+ ++ + IA A +HG ++ + S + + +S
Sbjct: 74 KLLAECDVIVNLVGSMSPRRDV-LRYLHVTVPGNIAKFAGQHGKML--VHFSTMSSDVAS 130
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S ++K E V A I++P + G ED +K+A+ + F P+ G++
Sbjct: 131 SSFYATSKLEGENTVRSVCKDAVIVKPNLVFGDEDHFFSKFAKLARVLPFLPVVC-GNSM 189
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
+QPVYV +VA +A + +G GK E+ GP +++ EL + + T +++P
Sbjct: 190 VQPVYVGEVAELTSAIV--EGQETGKTLEVCGPKTYSMRELMQFILQTTARDKPVLELPT 247
Query: 252 PVAKAVAMPREILLKKVPF---PLPRPG--LFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+A+AVA E L+ V F PL G + D++ A +IV+D+ D+ ++
Sbjct: 248 VLARAVAALCE--LRLVSFLLKPLTGDGEPILTTDQL-ALLKYSIVADST-AGSDVRVMA 303
Query: 307 HKLKG-YPTEYLIWYRKGG 324
++ P I+ ++GG
Sbjct: 304 QSIEDIMPGCLEIYKKRGG 322
>gi|313220631|emb|CBY31477.1| unnamed protein product [Oikopleura dioica]
gi|313235218|emb|CBY10783.1| unnamed protein product [Oikopleura dioica]
Length = 458
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 18/251 (7%)
Query: 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH--LKLMGDLGQI---VP 59
+SG ATVFG TG +G +V L +MGS +++P R + R L+LMGDLG +
Sbjct: 35 FSGQAATVFGATGQVGHTLVNNLGRMGSSIVLPHRNSTEAWRSNDLRLMGDLGTLQFYQH 94
Query: 60 MKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRF 119
R D + T+ +NVV N+IG E +NY+ + N ER+A + G R
Sbjct: 95 FDVAHRSDREVMETIEHSNVVYNVIGTRRELKNYTRRETNVDWPERLAKLVAAKGDGTRL 154
Query: 120 IQISCLGASSSS---PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ-- 174
+ + L + S++ A E + LP A I++ A ++G D N W+
Sbjct: 155 VHLVPLNTGNEEYCKYSKILEEHTEACEKIRDALPDAIIVKSADVVGWNDSYCNFWSMNN 214
Query: 175 --FVKKFNF---FPLF--GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIF 227
+ + ++ FPL G T + P+ D+ A+ A + S G +EL G +F
Sbjct: 215 EYYQRSLSYIGAFPLMYGGGAQTYVSPIVRRDLGRAL-AKIGAHPDSDGHDFELFGNKVF 273
Query: 228 TVHELAELMYD 238
+ EL E MYD
Sbjct: 274 KLVELVEFMYD 284
>gi|394989690|ref|ZP_10382523.1| hypothetical protein SCD_02116 [Sulfuricella denitrificans skB26]
gi|393791190|dbj|GAB72162.1| hypothetical protein SCD_02116 [Sulfuricella denitrificans skB26]
Length = 314
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 138/266 (51%), Gaps = 16/266 (6%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G GF+G++VV +L + G +V VP+R + +HL ++ + + + + D +
Sbjct: 7 CVLGGGGFVGQHVVSRLCEQGYEVRVPYRNI-NRAKHLTVLPTVSLV---EADIHDPVEL 62
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
K + + V+NL+G +E + +F+ + + ++ + G+ R + +S +GAS
Sbjct: 63 KKMLQGMDAVVNLVGILHERKRGAFQRAHVDLPRKVVEACRAT-GVKRLLHMSAIGASVD 121
Query: 131 SPSRVFSTKAAAEEAVLREL---PWA-TIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
SR +K EA++RE P A T+ RP+ + G D LN +A + FPL G
Sbjct: 122 GLSRYQRSKGEG-EALVREAHGEPLAVTVFRPSVIFGPGDSFLNLFAGLLNWTPVFPL-G 179
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
S ++QP+YV DVA A+ A++ + T G+ Y+L GP ++T+ EL E + E
Sbjct: 180 SSSAKMQPIYVGDVAQAIVASVNNPAT-FGQSYDLCGPTVYTLQELVEY----VAEVKGL 234
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPL 272
+ P++ ++ + I+L +P L
Sbjct: 235 KRTVIPLSAGMSSLQSIILGLMPIKL 260
>gi|91203184|emb|CAJ72823.1| similar to dehydratase OleE [Streptomyces antibioticus] [Candidatus
Kuenenia stuttgartiensis]
Length = 297
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 126/247 (51%), Gaps = 8/247 (3%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT 73
G+TGF+G+ ++ +L + +V R + KL + QI + + D +K
Sbjct: 7 GSTGFVGKQLLNKLIENKYKVKCLVRKGSEH----KLGQYINQIEVVNGDITDPPCLKNA 62
Query: 74 MAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+A VIN++G RE + +FE +++ + AK+ G + RFIQ+S LGA
Sbjct: 63 IADCEAVINIVGIIREIPGKGVTFEKLHYEGTHNLIREAKKQG-VDRFIQMSALGAKQEG 121
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
+ TK AEE + + TI RP+ + G ED+ +N +A +K F P+ GDG +
Sbjct: 122 KTLYQQTKFLAEECIRKSGLNYTIFRPSIIFGKEDKFVNTFAGMLKIQQFIPVIGDGKYK 181
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
+QPV V +V AA +++ T GK YE+GGP+ +++ ++ + P+ + +P
Sbjct: 182 LQPVAVENVVAAFVDSIERRDT-FGKSYEVGGPEKIEFNDIINIIGKVLCLPPYKIHIPV 240
Query: 252 PVAKAVA 258
+ +A
Sbjct: 241 WIMNTLA 247
>gi|342183755|emb|CCC93235.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 373
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 115/245 (46%), Gaps = 14/245 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGD--LGQIVPMK 61
G+ FG TG LG ++ G ++PFR G RHL++ GD +GQ
Sbjct: 29 GVNVATFGATGILGTHIHHLCCYHGFTSILPFRFRAGLTSGVRHLRMAGDGTVGQNFDTD 88
Query: 62 FNPRDDNTIKATMAKANVVINLIG-------REYETRNYSFEDVNHFMAERIAGIAKEHG 114
+ + +K+ + K + VIN++G E +S E VN +A +E G
Sbjct: 89 YEIDKEFVVKSILEKVDNVINVVGVWQEPAVYENSQSWFSMEAVNVEWPRMLARWCREMG 148
Query: 115 GIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
I+R +S +GA +SPS++ K AAE AVL E P ATI+R + D +++
Sbjct: 149 -ILRLTHMSMVGADLNSPSKLLRQKRAAELAVLEEFPTATIIRGTDIFAENDYSYSRYLM 207
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+K+ P+ G QPV+ D+A A ++ D T G+I ELGGP FT +
Sbjct: 208 AQRKYKIVPMPNKGQRIHQPVFAGDLAEAACRSILLDHTE-GRIAELGGPVRFTTSDFLR 266
Query: 235 LMYDT 239
D
Sbjct: 267 WCADC 271
>gi|410478133|ref|YP_006765770.1| nucleoside-diphosphate-sugar epimerase [Leptospirillum ferriphilum
ML-04]
gi|424868481|ref|ZP_18292224.1| Putative NAD-dependent epimerase/dehydratase [Leptospirillum sp.
Group II 'C75']
gi|124516007|gb|EAY57516.1| putative NAD-dependent epimerase/dehydratase [Leptospirillum
rubarum]
gi|387221250|gb|EIJ75831.1| Putative NAD-dependent epimerase/dehydratase [Leptospirillum sp.
Group II 'C75']
gi|406773385|gb|AFS52810.1| putative nucleoside-diphosphate-sugar epimerase [Leptospirillum
ferriphilum ML-04]
Length = 299
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 120/231 (51%), Gaps = 3/231 (1%)
Query: 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
N D ++ ++V++L G ET++ S+E + H R A + G + R I +
Sbjct: 51 NVTDRGSLAPVFDGVDMVLHLTGILAETKSQSYEAI-HVDGTRNVLDASKAGRVSRIIYL 109
Query: 123 SCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
S +GAS ++ SR TKA AE+ + TI RP+ + G +D+ LN +A K +
Sbjct: 110 SAIGASRTARSRYHRTKAEAEDLLKNSGMDVTIFRPSVVFGKDDKFLNLFAGMGKTLHVL 169
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
PL GDG +R+ PV+V D+ +V ++K T +G+ Y++GG I+T HEL E + ++
Sbjct: 170 PLIGDGQSRVHPVWVNDLVESVLESMKQPET-VGRTYQMGGCRIYTYHELMETLKRSLHF 228
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293
+ P + + VA +E LL VPF L++ A +D +VS
Sbjct: 229 RAIVLPQPETLLRVVAGMQEALL-PVPFLTREMVTMALEDNVADPNDLVVS 278
>gi|448533675|ref|ZP_21621463.1| NAD-dependent epimerase/dehydratase [Halorubrum hochstenium ATCC
700873]
gi|445705506|gb|ELZ57401.1| NAD-dependent epimerase/dehydratase [Halorubrum hochstenium ATCC
700873]
Length = 298
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 130/259 (50%), Gaps = 33/259 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-LMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G Y+ + LA+ G V R E+ P + + GD+ D +I
Sbjct: 5 VAGGTGFIGSYLCRALAEDGHAVTALSRSPEETPEGVTGVSGDV----------TDHGSI 54
Query: 71 KATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
++ + + V+NL+ E E N + ++ E + A E GG+ RF+Q+S LG
Sbjct: 55 ESAVEGHDAVVNLVALSPLFEPEGGNRMHDRIHRGGTENLV-RAAEDGGVERFVQLSALG 113
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---- 180
A + + K AE A++RE L WA I RP+ + G ++ F K+
Sbjct: 114 ADPNGDTAYIRAKGEAE-AIVRESDLDWA-IFRPSVVFGEG----GEFVSFTKRLKGMFA 167
Query: 181 ----FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+PL G G TR QP++V D+ + AA+ ++ G+ YE+GGP++ T+ ++ +L+
Sbjct: 168 PGVPLYPLPGGGKTRFQPIHVEDLVPMIAAAVTEE-EHAGETYEIGGPEVLTLRQVTDLV 226
Query: 237 YDTIREYPHYVKVPFPVAK 255
Y+ R+ + +P P+AK
Sbjct: 227 YEAERKGVTILPLPMPLAK 245
>gi|390574925|ref|ZP_10255035.1| NADH dehydrogenase [Burkholderia terrae BS001]
gi|420256056|ref|ZP_14758920.1| putative nucleoside-diphosphate sugar epimerase [Burkholderia sp.
BT03]
gi|389933166|gb|EIM95184.1| NADH dehydrogenase [Burkholderia terrae BS001]
gi|398043955|gb|EJL36816.1| putative nucleoside-diphosphate sugar epimerase [Burkholderia sp.
BT03]
Length = 318
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 127/258 (49%), Gaps = 13/258 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+G ++V L ++G V + R + RHL L+ I ++ + D +
Sbjct: 7 AIVGGSGFIGSHLVNALVELGKTVRIATRR-RYNARHLTLL----PIDVIETDVFDPIQL 61
Query: 71 KATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ A+ VINL+G + R F + + +I A E G+ R I +S +G
Sbjct: 62 ARFVEGADAVINLVGVLHGHRGDPYGPEFAKAHVELPTKIVS-ACEGKGVHRLIHMSAIG 120
Query: 127 ASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A PS +K E AV + +TI RP+ + G ED LNK+A + F PL
Sbjct: 121 ADPRGPSMYLRSKGDGERAVHASSMLASTIFRPSVVFGPEDAFLNKFAFLQRMFPVIPL- 179
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ R QP++V DVA A+ L D S G+ YELGGP ++T+ L E D I ++
Sbjct: 180 AKPNARFQPIFVGDVAKAIVNVLDLD-ASTGRTYELGGPSVYTLEALVEYCGDVIGKHAR 238
Query: 246 YVKVPFPVAKAVAMPREI 263
+++P +A+ A+ E+
Sbjct: 239 IIRLPDSLARLQALSFEL 256
>gi|398832812|ref|ZP_10590962.1| putative nucleoside-diphosphate sugar epimerase [Herbaspirillum sp.
YR522]
gi|398222591|gb|EJN08961.1| putative nucleoside-diphosphate sugar epimerase [Herbaspirillum sp.
YR522]
Length = 322
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 140/293 (47%), Gaps = 29/293 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G +V+ L +V+VP R E K + + ++ + DD +
Sbjct: 8 VLGGTGFVGTRLVRLLGSSTDYRVMVPTRRIE----RAKHLLVSPVVSVVQADIHDDGVL 63
Query: 71 KATMAKANVVINLIG-------REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
+++A+VVINL+G R+ + FE + + RI HG + R++ +S
Sbjct: 64 SQLVSQADVVINLVGILHSRPARKGQAYGPDFEAQHVALPRRIVAACLRHG-VARYLHMS 122
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF 181
LGA PS +KAA E V + LP A I RP+ + G DR +N +A K+F
Sbjct: 123 ALGADPHGPSMYQRSKAAGEAEVTAQPGLP-AVIFRPSVIFGEGDRFINLFAGLQKRFPV 181
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM-YDTI 240
PL G R QPVYV DVA A A+ D G+ +ELGGP ++++ EL L +
Sbjct: 182 LPL-GSAEARFQPVYVGDVAHAFKQAI-DQPKLAGQCFELGGPRVYSLRELVRLSGWMVG 239
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293
R P P+ + A+ + LL+ +P L + D + + D +++
Sbjct: 240 RNRPI-----LPLPSSAALLQAWLLEHLPGK-----LMSRDNVASMRVDNVLA 282
>gi|89901466|ref|YP_523937.1| NAD-dependent epimerase/dehydratase [Rhodoferax ferrireducens T118]
gi|89346203|gb|ABD70406.1| NAD-dependent epimerase/dehydratase [Rhodoferax ferrireducens T118]
Length = 319
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 150/330 (45%), Gaps = 42/330 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G V Q+L G V VP R H + + L + ++F+ D+ +
Sbjct: 6 VLGGTGFVGTQVCQKLLSQGWHVTVPTR----QRAHAQHLQPLSGLTLLEFDVHDEAALT 61
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS-- 129
+A + V+NL+ + + +F+ V+ + +++A + G+ R + IS LGA +
Sbjct: 62 QAVAGHDAVVNLVAILHGDQ-AAFDRVHVALPKKLARACRA-AGVKRVVHISALGADAQH 119
Query: 130 --SSPSRVFSTKAAAEEAVLREL---PWA----TIMRPAAMIGTEDRLLNKWAQFVKKFN 180
S+PS +K E L+ P A TI RP+ M G D+ LN +A+ K
Sbjct: 120 PQSAPSMYLRSKGQGEAVWLQAAGVGPQAAFDLTIFRPSVMFGARDKFLNVFARLQKVLP 179
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAAL--KDDG----TSMGKIYELGGPDIFTVHELAE 234
F PL G+ R QPV+V DVA+AV +L D G + + E GP++FT+ +L +
Sbjct: 180 FMPLACAGA-RFQPVWVDDVASAVVKSLMPGDAGVMAPAASPRTIEACGPEVFTLKQLVQ 238
Query: 235 LMYDTI-----REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPG--LFNLDEINAYT 287
L R P +A+PR + + PG + + D +++
Sbjct: 239 LAAQLSGVCGGRGRP-----------VIALPRWLGHVQAALMALAPGEPVMSRDNLDSMQ 287
Query: 288 SDTIVSDNALTFQDLGIVPHKLKGYPTEYL 317
D + S Q LGI P L+ +YL
Sbjct: 288 VDNVASGTLPGLQSLGITPSALRPIAQDYL 317
>gi|70906412|gb|AAZ14931.1| putative nucleoside-diphosphate-sugar epimerase [Coprinellus
disseminatus]
Length = 330
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 138/297 (46%), Gaps = 27/297 (9%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH-LKLMGDLGQIVPM--------KFNP 64
G G G+++ + L +V P R + R+ +L+ L + +P +
Sbjct: 12 GFLGPTGKHIARNLVSPSMKVNGPERIVQLSSRNPARLLQTLERDLPQASSRLQATSLDV 71
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
T+ A+ V++L+G Y + FE + AE +A A++ G R I IS
Sbjct: 72 TKPETLTPAFEGAHTVVSLVGVMY-GKPADFERIQWRGAENVAKAAQKAGA--RLIHISA 128
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GA+ SS + TK EEAV P ATI+RP+ + G ED N++++ K F P+
Sbjct: 129 IGANPSSDISYWRTKGLGEEAVRSVHPTATIIRPSLVFGPEDDFFNRFSKLSKFLPFLPV 188
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDD----GTSMGKIYELGGPDIFTVHELAELMYDTI 240
FG G QPVYV D+A A+ + D GKI E GGP ++T ++L T+
Sbjct: 189 FGGGQAMFQPVYVDDIAKAIEVMSRGDPEVEKEISGKIIEAGGPRVYTYYDLMV----TV 244
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDN 295
+Y H ++ V M + + + +P P LF + D++ D IVS N
Sbjct: 245 LKYSHRNRMVISFPYWVGMMQGFVGEMLP-----PNLFTVTRDQVRQLGYDNIVSPN 296
>gi|334132822|ref|ZP_08506578.1| NADH ubiquinone oxidoreductase 1 alpha subunit [Methyloversatilis
universalis FAM5]
gi|333442306|gb|EGK70277.1| NADH ubiquinone oxidoreductase 1 alpha subunit [Methyloversatilis
universalis FAM5]
Length = 318
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 144/315 (45%), Gaps = 23/315 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G GF+G V LA+ +V+VP R D +HL L L + ++ + D +
Sbjct: 8 LIGGAGFVGSQVAGLLAERNVRVIVPTRR-RDRAKHLIL---LPMVDVVEADVHDPAVLA 63
Query: 72 ATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
A A+ VIN +G R + FE H + A + G+ R + +S LGA
Sbjct: 64 RLAAGADAVINCVGILHSRSGQPWGRDFERA-HVALPKAIAAAAKAAGVQRLVHVSALGA 122
Query: 128 SSSSPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
+ ++PS +KAA E A+ +PW T+ RP+ + G L+ +A +K FPL G
Sbjct: 123 ADAAPSEYLRSKAAGEIAIRNGGVPW-TVFRPSLIFGDGKCFLSMFAGLLKIAPVFPLAG 181
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
TR QPV V DVA + AL DD ++G+ + L GP ++T+ EL ++ I
Sbjct: 182 -ADTRYQPVSVRDVARCIVRALDDD-AAIGQTFALCGPKVYTMRELVKMTGRAIGAERCV 239
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P P+A A+ E+ P P L + D + + D V D T VP
Sbjct: 240 IGLPGPLASLQALALEL--------APGPTLMSRDNLRSMQVDN-VCDAGCTLP-FDFVP 289
Query: 307 HKLKGYPTEYLIWYR 321
L+ L +R
Sbjct: 290 ATLESEIDACLADFR 304
>gi|269958307|ref|YP_003328094.1| epimerase [Anaplasma centrale str. Israel]
gi|269848136|gb|ACZ48780.1| putative epimerase [Anaplasma centrale str. Israel]
Length = 326
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 160/319 (50%), Gaps = 17/319 (5%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
VFG +GF+GR+VV L G V V R E R LKL+G+LGQ+ + + + I+
Sbjct: 15 VFGGSGFIGRHVVSSLVLRGYTVSVFTRHPEKAAR-LKLIGNLGQVQIVPGDLSNALLIE 73
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+A+ +V++NL+G R+ ++ + IA A +HG ++ + S + + +S
Sbjct: 74 KLLAECDVIVNLVGSMSPRRDV-LRYLHVTVPGNIAKFAGQHGKML--VHFSTMSSDVAS 130
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S ++K E V A I++P + G ED +K+A+ + F P+ G++
Sbjct: 131 SSFYATSKLEGENTVRSVCKDAVIVKPNLVFGDEDHFFSKFAKLARVLPFLPVVC-GNSM 189
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
+QPVYV +VA +A + +G GK E+ GP +++ EL + + T +++P
Sbjct: 190 VQPVYVGEVAELTSAIV--EGQETGKTLEVCGPKTYSMRELMQFILQTTARDKPVLELPT 247
Query: 252 PVAKAVAMPREILLKKVPF---PLPRPG--LFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+A+ VA E L+ V F PL G + D++ A +IV+D+ D+ ++
Sbjct: 248 VLARVVAALCE--LRLVSFLLKPLTGDGEPILTTDQL-ALLKYSIVADST-AGSDVRVMA 303
Query: 307 HKLKG-YPTEYLIWYRKGG 324
++ P I+ ++GG
Sbjct: 304 QSIEDIMPGCLEIYKKRGG 322
>gi|393774596|ref|ZP_10362957.1| NADH dehydrogenase [Novosphingobium sp. Rr 2-17]
gi|392719929|gb|EIZ77433.1| NADH dehydrogenase [Novosphingobium sp. Rr 2-17]
Length = 322
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 149/320 (46%), Gaps = 20/320 (6%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G I TV G +G++GR++ Q+L G+++ V R + ++ +G+LGQ+ K +
Sbjct: 11 GKIVTVLGGSGYVGRHLAQELLARGARLRVASRQPQK-AYMVRALGNLGQVQFAKVDVTK 69
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
++ A +A ++ V+NL+G D A + G + +S LG
Sbjct: 70 PASLAAALAGSDAVVNLVGAFAGNL-----DAVQGEGAGRIAAAAKAAGAAALVHVSALG 124
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
AS+ S TKA E+AVL P ATI+RP+ M G +D L+ + + + P+F
Sbjct: 125 ASAGSDIAYARTKAEGEDAVLAAFPSATIVRPSLMFGPDDNLVMMFGDLISRLPAMPVFA 184
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE-LMYDTIREYPH 245
++QP++V D A A+ AL D + GK +EL GP++ T+ EL + + R P
Sbjct: 185 P-DAKLQPLFVDDAAQAIAHALTDPASFGGKTFELAGPEVLTMLELNQRIALAQGRSRP- 242
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDNALTFQDLGI 304
+A+P + F PG D++ + ++ + +LG+
Sbjct: 243 ----------LIALPDTVSGLIAGFTGWLPGAPITTDQLKLLQAGSVATGTVPGIDELGV 292
Query: 305 VPHKLKGYPTEYLIWYRKGG 324
P L + +++ +RK G
Sbjct: 293 SPRPLGLFLDRWMVRFRKHG 312
>gi|71746242|ref|XP_827678.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831843|gb|EAN77348.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 373
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 14/245 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGD--LGQIVPMK 61
G+ FG TG LG ++ G +VPFR G RHL++ GD +GQ
Sbjct: 29 GVNVATFGATGVLGTHIHHLCCYHGFTSIVPFRFRAGMASGVRHLRMAGDGTVGQNFDTD 88
Query: 62 FNPRDDNTIKATMAKANVVINLIGR-------EYETRNYSFEDVNHFMAERIAGIAKEHG 114
+ + +K+ + K + VIN +G E +S E +N +A +E G
Sbjct: 89 YEIDKEFVVKSILEKVDNVINAVGAWQEPAVYENSQSWFSMEAINVEWPRMLARWCREMG 148
Query: 115 GIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
I+R +S +GA SPS++ K AAE AVL E P ATI+R + D +++
Sbjct: 149 -ILRLTHMSMVGADLHSPSKLLRQKRAAEIAVLEEFPTATIIRGTDIFAENDYSYSRYLM 207
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+K+ P+ G QPV+ D+A A ++ D T G+I ELGGP FT +
Sbjct: 208 AQRKYKIVPMPNRGQRIHQPVFAGDLAEATCRSILLDHTE-GRIAELGGPVRFTTADYLR 266
Query: 235 LMYDT 239
D
Sbjct: 267 WCADC 271
>gi|224824147|ref|ZP_03697255.1| NAD-dependent epimerase/dehydratase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224603566|gb|EEG09741.1| NAD-dependent epimerase/dehydratase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 315
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 144/308 (46%), Gaps = 18/308 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G Y+ ++LA+ G ++ R E +H + + L + ++ + D ++
Sbjct: 7 CVIGGSGFIGGYLGERLAEAGVEITFATRNYE---QHKEKLIVLPKTELVEVDVHDQASL 63
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
A + + V++++G + +R +FE + + E+I A + GI R I IS LGA +
Sbjct: 64 NALLHSHDAVVSMVGILHGSRQ-AFERAHVALPEKIIQ-ACRYNGIRRLIHISALGADPN 121
Query: 131 SPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
PS TK AE+ + L W TI+RP+ + G D L +A + PL G
Sbjct: 122 GPSHYQQTKGIAEQRIEASGLDW-TILRPSVVFGRGDSFLTLFAHLARTLPVLPLAG-AD 179
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
TR QPV+ DVA A+ A L +D T KI EL G ++ + EL + + P + +
Sbjct: 180 TRFQPVWADDVARAMVACLANDATVHHKI-ELAGTKVYALRELVRYVAGLSGQQPLIIGL 238
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
P +A A E+ LP L + D + + + D V + LG P L
Sbjct: 239 PAGLAMLQAGLMEL--------LPGQPLMSRDNVRSLSVDN-VGTGPFPRELLGFTPTAL 289
Query: 310 KGYPTEYL 317
+ YL
Sbjct: 290 EAIAPLYL 297
>gi|385207537|ref|ZP_10034405.1| putative nucleoside-diphosphate sugar epimerase [Burkholderia sp.
Ch1-1]
gi|385179875|gb|EIF29151.1| putative nucleoside-diphosphate sugar epimerase [Burkholderia sp.
Ch1-1]
Length = 317
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 24/312 (7%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+G ++V L + G V + R + RHL L+ I ++ + D +
Sbjct: 7 AIIGGSGFIGSHLVNALVEAGKDVRIATRR-RYNARHLTLL----PIDVIEADVFDPVQL 61
Query: 71 KATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ A+ VINL+ + R F ++ + RI A E G+ R + + LG
Sbjct: 62 ARFVEGADCVINLVATLHGKRGTPYGPEFARMHVELPTRIVA-ACEGKGVHRLLHVGALG 120
Query: 127 ASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A + PS +K E+AV L W TI RP+ + G ED+ LNK+A + F PL
Sbjct: 121 ADPNGPSMYTRSKGDGEKAVHAANLAW-TIFRPSVVFGPEDQFLNKFAFLQRMFPVIPL- 178
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ QPVYV DVA A+ L D G+ YELGGP ++T+ +L + D I ++
Sbjct: 179 AMPDAKFQPVYVGDVAKAIVNVLDLDAAG-GRTYELGGPTVYTLEDLVKYCGDVIGKHAR 237
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+++P A+ A+ E+ P + + D +++ D ++S +LGI
Sbjct: 238 IIRLPEAFARLQALTFEM--------APGEPVISRDNLDSMKVDNVLS--GPLAPELGIE 287
Query: 306 PHKLKGYPTEYL 317
P ++ YL
Sbjct: 288 PASIETIAPIYL 299
>gi|261331883|emb|CBH14877.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 373
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 14/245 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGD--LGQIVPMK 61
G+ FG TG LG ++ G +VPFR G RHL++ GD +GQ
Sbjct: 29 GVNVATFGATGVLGTHIHHLCCYHGFTSIVPFRFRAGMASGVRHLRMAGDGTVGQNFDTD 88
Query: 62 FNPRDDNTIKATMAKANVVINLIGR-------EYETRNYSFEDVNHFMAERIAGIAKEHG 114
+ + +K+ + K + VIN +G E +S E +N +A +E G
Sbjct: 89 YEIDKEFVVKSILEKVDNVINAVGAWQEPAVYENSQSWFSMEAINVEWPRMLARWCREMG 148
Query: 115 GIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
I+R +S +GA SPS++ K AAE AVL E P ATI+R + D +++
Sbjct: 149 -ILRLTHMSMVGADLHSPSKLLRQKRAAEIAVLEEFPTATIIRGTDIFAENDYSYSRYLM 207
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+K+ P+ G QPV+ D+A A ++ D T G+I ELGGP FT +
Sbjct: 208 AQRKYKIVPMPNRGQRIHQPVFAGDLAEAACRSILLDHTE-GRIAELGGPVRFTTADYLR 266
Query: 235 LMYDT 239
D
Sbjct: 267 WCADC 271
>gi|56417303|ref|YP_154377.1| hypothetical protein AM1337 [Anaplasma marginale str. St. Maries]
gi|56388535|gb|AAV87122.1| hypothetical protein AM1337 [Anaplasma marginale str. St. Maries]
Length = 326
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 160/319 (50%), Gaps = 17/319 (5%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
VFG +GF+GR+VV L G V V R E R LKL+G+LGQ+ + + + I+
Sbjct: 15 VFGGSGFIGRHVVSSLVLRGYTVSVFTRHPEKAAR-LKLIGNLGQVQIVPGDLSNALLIE 73
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+A+ +V++NL+G R+ ++ + IA A +HG ++ + S + + +S
Sbjct: 74 KLLAECDVIVNLVGSMSPRRDV-LRYLHVTVPGNIAKFAGQHGKML--VHFSTMSSDVAS 130
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S ++K E V A I++P + G ED +K+A+ + F P+ G++
Sbjct: 131 SSFYATSKLEGENTVRSVCKDAVIVKPNLVFGDEDHFFSKFAKLARVLPFLPVVC-GNSM 189
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
+QPVYV +VA +A + +G GK E+ GP +++ EL + + T +++P
Sbjct: 190 VQPVYVGEVAELTSAIV--EGQETGKTLEVCGPKTYSMRELMQFILQTTARDKPVLELPT 247
Query: 252 PVAKAVAMPREILLKKVPF---PLPRPG--LFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+A+ VA E L+ V F PL G + D++ A +IV+D+ D+ ++
Sbjct: 248 VLARVVAALCE--LRLVSFLLKPLTGDGEPILTTDQL-ALLKYSIVADST-AGGDVRVMA 303
Query: 307 HKLKG-YPTEYLIWYRKGG 324
++ P I+ ++GG
Sbjct: 304 QSIEDIMPGCLEIYKKRGG 322
>gi|406924714|gb|EKD61413.1| NADH-ubiquinone oxidoreductase, partial [uncultured bacterium]
Length = 183
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 99/183 (54%), Gaps = 3/183 (1%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ T++G +GF+GRY+ +++AK G +V + R ++ +K G +GQ+ P+ N RDD
Sbjct: 4 LVTIYGGSGFVGRYIARRMAKEGWRVRIACR-RPNEALFVKSYGAVGQVEPVLCNIRDDA 62
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++++ MA A+ V+N +G +F V A RIA IA E G + + IS LGA
Sbjct: 63 SVRSVMAGADAVVNCVGTFDRGGKNNFTAVQAEGAGRIARIAAEQG-VANLVHISALGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ S +K E A+L P A I+RP+ + G ED N++ PL G G
Sbjct: 122 KNAGSLYAQSKGEGEAAILAAFPHAMILRPSVIFGNEDGFFNRFGGMAGMGPVLPLVG-G 180
Query: 189 STR 191
+T+
Sbjct: 181 NTK 183
>gi|392597732|gb|EIW87054.1| NAD(P)-binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 327
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 128/255 (50%), Gaps = 24/255 (9%)
Query: 59 PMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMR 118
P K + D +++ A+VV++L+G + + E + AE +A A+ +
Sbjct: 63 PCKADVTDPSSLAKAFEDADVVVSLVGTMSSKPDVA-EKLQWHGAENVAKAAENANAKL- 120
Query: 119 FIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKK 178
I S +GA +S TKA E+AVL P ATI+RP+ + G D N++AQ +
Sbjct: 121 -IHFSAIGADETSKVAYSRTKALGEKAVLAASPTATIIRPSIVFGPGDAFFNRFAQMSRF 179
Query: 179 FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD----GTSMGKIYELGGPDIFTVHELAE 234
F P+FG G TR QPVYV D+ AV ++D GKI E GGP++FT E+
Sbjct: 180 LPFMPVFGGGKTRFQPVYVGDIGRAVELLSRNDPEVEKDVSGKIIEAGGPEVFTYEEIMR 239
Query: 235 L-MYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTI 291
L ++ T R P + +PF V K A +L+K+P LF L D++ D I
Sbjct: 240 LVLHYTGRRRP-ILSLPFGVGKLQAA----VLEKLP-----ENLFTLTQDQVEQLKIDNI 289
Query: 292 VSDNAL----TFQDL 302
V+ N L +F+D+
Sbjct: 290 VNPNPLSEHMSFEDI 304
>gi|222480302|ref|YP_002566539.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
gi|222453204|gb|ACM57469.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
Length = 298
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 126/255 (49%), Gaps = 25/255 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL-KLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G Y+ + LA G +V R D P + GD+ D ++I
Sbjct: 5 VAGGTGFIGSYLCRALADGGHEVTALSRSPSDTPEGVASATGDV----------TDYDSI 54
Query: 71 KATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + + V+NL+ E + N + ++ E + A E GG RF+Q+S LG
Sbjct: 55 ASAVEGQDAVVNLVALSPLFEPKGGNVMHDRIHRKGTENLV-RAAEEGGAERFLQLSALG 113
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLN----KWAQFVKKFN 180
A + K AEE ++RE L W TI RP+ + G ++ F
Sbjct: 114 ADPDGDTAYIRAKGQAEE-IVRESGLGW-TIFRPSVVFGEGGEFVSFTKRLKGMFAPGLP 171
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
+PL G G TR QP++V D+ + + AAL++D +G+ YE+GGP+ T+ ++ +L+Y+
Sbjct: 172 LYPLPGGGKTRFQPIHVEDLVSMLVAALEED-EHVGETYEIGGPETLTLRQVTDLVYEAE 230
Query: 241 REYPHYVKVPFPVAK 255
++ + +P P+A+
Sbjct: 231 KKGVTIIPLPMPLAR 245
>gi|340056603|emb|CCC50938.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 373
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 145/333 (43%), Gaps = 27/333 (8%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGD--LGQIVPMK 61
G+ FG TG LG ++ G ++PFR G RHL++ GD +GQ
Sbjct: 29 GVNIATFGATGVLGTHIHHLCCYHGFTSILPFRFRAGMASGVRHLRMAGDGTVGQNFDTD 88
Query: 62 FNPRDDNTIKATMAKANVVINLIGR-------EYETRNYSFEDVNHFMAERIAGIAKEHG 114
+ + +K+ + K + VIN++G E +S E +N +A +E G
Sbjct: 89 YEIDKEFVVKSILEKVDNVINVVGAWQEPTIYENSQSWFSMEAINVEWPRMLARWCREMG 148
Query: 115 GIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
I+R +S +GA +SPS+V K AAE AVL E P ATI+R + D +++
Sbjct: 149 -ILRLTHMSMVGADLNSPSKVLRQKRAAEIAVLEEFPTATIIRGTDIFAENDFSYSRYLM 207
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+K+ P+ G QPV+ D+A A ++ D T G+I ELGGP F +
Sbjct: 208 AQRKYKIVPMPNKGERIHQPVFAGDLAEAACRSILLDHTE-GRIAELGGPVRFKTSDFLR 266
Query: 235 LMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPL-----PRPGLFNLDEINAYTSD 289
E + + + + K + L +++PF +P +N D + D
Sbjct: 267 W----CSECNGVLNLTWNMPKWMWRIGCTLNERLPFHQGALLGTKPPAWNKDWLERQFID 322
Query: 290 TIVS----DNALTFQDLGIVPHKLKGYPTEYLI 318
+ + L ++D GI L +Y I
Sbjct: 323 NCATPERDPDLLDWEDFGIPREDLYRLEEKYFI 355
>gi|347540099|ref|YP_004847524.1| NAD-dependent epimerase/dehydratase [Pseudogulbenkiania sp. NH8B]
gi|345643277|dbj|BAK77110.1| NAD-dependent epimerase/dehydratase [Pseudogulbenkiania sp. NH8B]
Length = 315
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 144/308 (46%), Gaps = 18/308 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G Y+ ++LA+ G ++ R E +H + + L + ++ + D ++
Sbjct: 7 CVIGGSGFIGGYLGERLAEAGVEITFATRNYE---QHKEKLIVLPKTELVEVDVHDQTSL 63
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
A + + V++++G + +R +FE + + E+I A + GI R I IS LGA +
Sbjct: 64 NALLHGHDAVVSMVGILHGSRQ-AFERAHVALPEKIIQ-ACRYNGIRRLIHISALGADPN 121
Query: 131 SPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
PS TK AE+ + L W TI+RP+ + G D L +A + PL G
Sbjct: 122 GPSHYQQTKGIAEQRIEASGLDW-TILRPSVVFGRGDSFLTLFAHLARTLPVLPLAG-AD 179
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
TR QPV+ DVA A+ A L +D T KI EL G ++ + EL + + P + +
Sbjct: 180 TRFQPVWADDVARAMVACLANDATVHHKI-ELAGTKVYALRELVRYVAGLSGQQPLIIGL 238
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
P +A A E+ LP L + D + + + D V + LG P L
Sbjct: 239 PAGLAMLQAGLMEL--------LPGQPLMSRDNVRSLSVDN-VGTGPFPRELLGFSPTAL 289
Query: 310 KGYPTEYL 317
+ YL
Sbjct: 290 EAIAPLYL 297
>gi|198283206|ref|YP_002219527.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218666203|ref|YP_002425437.1| male sterility protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247727|gb|ACH83320.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218518416|gb|ACK79002.1| male sterility protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 338
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 27/244 (11%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TGF+GR++ ++L++ G V + R E RH + + L + ++ N D +
Sbjct: 7 CILGGTGFVGRHLAERLSQKGHAVRILTRNRE---RHRENLLVLPGVELIEANVHDPVAL 63
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
K +A +VVINL+G E F D NH R+ A GI R + +S LGAS +
Sbjct: 64 KKQLAGRDVVINLVGILNERHQGDF-DRNHVELPRLVVGACNDLGIPRLLHMSALGASPT 122
Query: 131 SPSRVFSTKAAAEEAVLR--------------ELP---WA-----TIMRPAAMIGTEDRL 168
PS +K EE V + E P W+ T RPA + G D
Sbjct: 123 GPSAYLRSKGTGEEIVRQSNGNRAEMGRFDDLEEPMPLWSHGLKTTSFRPAVIFGEGDSF 182
Query: 169 LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFT 228
N++A +++ FF R+QPV++ DV +A ++ DD + G+ Y+L GP ++T
Sbjct: 183 FNRFAGLLRRIPFFIPLARSKARMQPVWIEDVVSAYVQSM-DDEKTYGQAYDLCGPKVYT 241
Query: 229 VHEL 232
+ EL
Sbjct: 242 LGEL 245
>gi|448465391|ref|ZP_21598801.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
gi|445814982|gb|EMA64925.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
Length = 298
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 31/258 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL-KLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G Y+ + LA G +V R D P + GD+ D ++I
Sbjct: 5 VAGGTGFIGSYLCRALADGGHEVTALSRSPGDVPEGVASATGDV----------TDYDSI 54
Query: 71 KATMAKANVVINLIGRE--YETRNYS-FEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ + V+NL+ +E + + D H R A E GG+ RF+Q+S LGA
Sbjct: 55 AGAVEGQDAVVNLVALSPLFEPKGGNIMHDRIHRGGTRNLVRAAEDGGVERFVQLSALGA 114
Query: 128 SSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN----- 180
+ + K AE A++R+ L W TI RP+ + G ++ F K+
Sbjct: 115 DADGDTAYIRAKGEAE-AIVRDSGLDW-TIFRPSVVFGEG----GEFVSFTKRLKGMFAP 168
Query: 181 ---FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
+PL G G TR QP++V D+ + AAL+DD +G+ YE+GGP+ T+ ++ +L+Y
Sbjct: 169 GVPLYPLPGGGKTRFQPIHVEDLVPMLVAALEDD-EHVGETYEVGGPETLTLRQVTDLVY 227
Query: 238 DTIREYPHYVKVPFPVAK 255
+ + V +P P+A+
Sbjct: 228 EAENKGVTIVPLPMPLAR 245
>gi|225850903|ref|YP_002731137.1| NADH dehydrogenase [Persephonella marina EX-H1]
gi|225645407|gb|ACO03593.1| NADH dehydrogenase [Persephonella marina EX-H1]
Length = 287
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 114/226 (50%), Gaps = 13/226 (5%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GRY+V++L+K Q+++P R + G+L I + F D+T++
Sbjct: 5 VTGGTGFVGRYLVEELSK-EHQLVLPTRDIKKAELLFSGRGNLDNIKIIHFQEDLDHTVR 63
Query: 72 ATMAKANVVINLIGREYETRN--YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
+ V+INL+G YE R +FE V HF + A GI F+Q+S LGA
Sbjct: 64 K--YRPEVIINLLGILYENRKKGITFEKV-HFEYTKKLVDAASDIGIKLFVQMSALGADP 120
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
SS SR TK AEE + I RP+ ++G E +L +F K PLF
Sbjct: 121 SSKSRYQRTKGVAEEYIRSSNINYIIHRPSIIMGREQKLFQDMKKFGK---IMPLFLAPE 177
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
R+QPV+++DV +L ++ +I+EL G + T EL E
Sbjct: 178 GRVQPVHILDVRDCFLKSLDEE----DEIFELCGDRVVTFKELFEF 219
>gi|410943133|ref|ZP_11374874.1| oxidoreductase [Gluconobacter frateurii NBRC 101659]
Length = 324
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 21/310 (6%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG---DLGQIVPMKFNPRDD 67
V G GF+GR V++L G V R +P ++ +G G++ +K + D
Sbjct: 20 AVLGGGGFIGRSFVRKLVATGHVV----RVGSQNPETIQGLGAARGTGRVEFLKVSVNDA 75
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ A+ +NL+ T + + +A + + G+ ++ +S +GA
Sbjct: 76 ERLDRLFDGADAAVNLV--SVMTPDVRVLHRINVEGAHLAAVRAQRAGVKSYVHMSAIGA 133
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
S +SP +K AAE+ V R P A ++RP+ + G ED N +A P+F
Sbjct: 134 SLTSPGAYGRSKGAAEQVVRRVFPDAGLLRPSVVFGPEDSFFNLFALIAAVSPVLPVFAQ 193
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
TR QPV+V D+A A+ L+ + G+I E GGPDI ++ E+ + + +
Sbjct: 194 -HTRYQPVFVEDIAEALLRLLQPE--HAGRIVEAGGPDILSMREMMAFVLEASGRH---- 246
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+ P+ A+A +L+K+P L D++ + D +V Q L I P
Sbjct: 247 RFLLPIPTALARLEASVLEKLP-----GHLLTRDQVAMMSVDNVVHPGPDNLQTLDIHPV 301
Query: 308 KLKGYPTEYL 317
++ EYL
Sbjct: 302 SMRMVVPEYL 311
>gi|163782851|ref|ZP_02177847.1| NADH dehydrogenase (ubiquinone) [Hydrogenivirga sp. 128-5-R1-1]
gi|159881972|gb|EDP75480.1| NADH dehydrogenase (ubiquinone) [Hydrogenivirga sp. 128-5-R1-1]
Length = 313
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 127/263 (48%), Gaps = 11/263 (4%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GRYVV++L K G P G D + +L G V + F RD +++K
Sbjct: 5 VTGGTGFVGRYVVRELLKEGH---TPILGVRDLKKAERLFGKDVSAVEVDF--RDKDSVK 59
Query: 72 ATM--AKANVVINLIGREYETRN--YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ +K V++LIG +E R +FE+V++ ++ + A E G I R + +S LG
Sbjct: 60 EALKTSKPEAVLHLIGILFEDRRRGLTFEEVHYLYSKNLYESASELG-ISRAVHMSALGT 118
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+PSR TK AE+ +L TIMRP+ ++G E +L + L G
Sbjct: 119 HDDAPSRYHQTKRWAEKELLGSGLNYTIMRPSLILGPEQKLFADMDSITRILPVVALPGG 178
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G+ + QPV V DVA AL + T G+IYEL G + +L ++ +
Sbjct: 179 GNYKFQPVDVRDVAGCFVKALSEPETE-GRIYELCGTKQVSFKDLLRDIFSFWNRRVLML 237
Query: 248 KVPFPVAKAVAMPREILLKKVPF 270
+P + + E++L PF
Sbjct: 238 PMPKTLMYYLGKVAELILNPPPF 260
>gi|148553585|ref|YP_001261167.1| NADH dehydrogenase [Sphingomonas wittichii RW1]
gi|148498775|gb|ABQ67029.1| NADH dehydrogenase [Sphingomonas wittichii RW1]
Length = 312
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 144/307 (46%), Gaps = 23/307 (7%)
Query: 21 RYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMAKA 77
RYV Q+L K G++V V E DP LK +G LGQ + + T+ A +A A
Sbjct: 16 RYVAQELLKAGARVRV----AERDPSDAWFLKPLGGLGQTQFVPASVIKPATVAAAVAGA 71
Query: 78 NVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFS 137
+ VINL+G F+ + H A + G + +S +GA SPS
Sbjct: 72 DSVINLVG----ILKGDFDSI-HRKGAAHVAAAAKAAGAESLVHVSAIGADPESPSAYGR 126
Query: 138 TKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYV 197
+K E AV P ATI+RP+ + G+ED LN++A ++ F P+ G+ + QPV+V
Sbjct: 127 SKGQGEAAVRAAFPEATIVRPSIVFGSEDGFLNRFAA-MQSAPFVPVL-RGAVKFQPVWV 184
Query: 198 VDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAV 257
DVA A+ AA D G GK YELGGP++ T+ EL + P +V +P +
Sbjct: 185 ADVARAIAAAALDPGAHAGKTYELGGPEVVTMAELNAWLARATGHSPTFVPIPDSIGG-- 242
Query: 258 AMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYL 317
LL V LP D+ +D +V+ A + GI P ++ +L
Sbjct: 243 ------LLATVAGALPG-APITRDQWRMLQADNVVTPGAKGIEAFGIKPTPMEAVAPAWL 295
Query: 318 IWYRKGG 324
+ YR G
Sbjct: 296 VRYRPHG 302
>gi|448427800|ref|ZP_21584075.1| NAD-dependent epimerase/dehydratase [Halorubrum terrestre JCM
10247]
gi|448485530|ref|ZP_21606734.1| NAD-dependent epimerase/dehydratase [Halorubrum arcis JCM 13916]
gi|448513728|ref|ZP_21616695.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
9100]
gi|448519175|ref|ZP_21617951.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
10118]
gi|445677694|gb|ELZ30193.1| NAD-dependent epimerase/dehydratase [Halorubrum terrestre JCM
10247]
gi|445693255|gb|ELZ45414.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
9100]
gi|445704191|gb|ELZ56109.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
10118]
gi|445817500|gb|EMA67371.1| NAD-dependent epimerase/dehydratase [Halorubrum arcis JCM 13916]
Length = 298
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 44/300 (14%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-LMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G Y+ + LA G V R E+ P + + GD+ D ++I
Sbjct: 5 VAGGTGFIGSYLCRALADDGHAVTALSRSPEEAPEGVTGVTGDV----------TDYDSI 54
Query: 71 KATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + + V+NL+ E + N + ++ E + A E GG+ F+Q+S LG
Sbjct: 55 ASAVDGHDAVVNLVALSPLFEPDGGNRMHDRIHRGGTENLV-RAAEDGGVDGFVQLSALG 113
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---- 180
A + + K AEE ++RE L W TI RP+ + G ++ F K+
Sbjct: 114 ADPNGDTAYIRAKGEAEE-IVRESGLDW-TIFRPSVVFGEG----GEFVSFTKRLKGMFA 167
Query: 181 ----FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+PL G G TR QP++V D+ + AA+ DD G+ YE+GGP++ T+ ++ +L+
Sbjct: 168 PGVPLYPLPGGGKTRFQPIHVEDLVPMIAAAVTDD-EHAGETYEVGGPEVLTLRQVTDLV 226
Query: 237 YDTIREYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDN 295
Y+ ++ V +P P+AK + + +L VP FP+ D+ + D +DN
Sbjct: 227 YEAEKKGVTIVPLPMPLAK-IGLS---VLGAVPGFPM------GADQYRSLKFDNTTADN 276
>gi|255596838|ref|XP_002536628.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus
communis]
gi|223519044|gb|EEF25754.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus
communis]
Length = 198
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 114/201 (56%), Gaps = 12/201 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
TV G +GF+G VV +L + G QV V R E +HL L+ ++ Q+V + D+ +
Sbjct: 6 TVLGGSGFVGSSVVARLDQAGYQVKVLTRRREQ-AKHLILLPNV-QVVECDIH--DEAAL 61
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
K + ++ VINL+G ++TR +FE ++H ++A + E I R + +S L AS++
Sbjct: 62 KTHLQGSDAVINLVGILHQTRTNTFEQMHHQFPRQVAQLC-EQLAIPRLLHMSALQASAN 120
Query: 131 SPSRVFSTKAAAEEAVLR--ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+PS TKAA ++AVL + TI RP+ + GT DR +N +A+ ++ + P+
Sbjct: 121 APSEYLRTKAAGDQAVLEFSKKLHVTIFRPSVIFGTRDRFINLFAKLIQ---WIPVLALA 177
Query: 189 --STRIQPVYVVDVAAAVTAA 207
+ QP++V DVAAA+ A
Sbjct: 178 MPQAKFQPIWVEDVAAAMVNA 198
>gi|448458557|ref|ZP_21596223.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
gi|445809069|gb|EMA59116.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
Length = 298
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 125/259 (48%), Gaps = 33/259 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL-KLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G Y+ + LA G +V R D P + GD+ D ++I
Sbjct: 5 VAGGTGFIGSYLCRALADGGHEVTALSRSVSDTPEGVASATGDV----------TDYDSI 54
Query: 71 KATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ V+NL+ E + N + ++ + + A E GG RF+Q+S LG
Sbjct: 55 AGAAEGQDAVVNLVALSPLFEPKGGNVMHDRIHRKGTDNLV-RAAEDGGAERFLQLSALG 113
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---- 180
A + + K AEE ++RE L W TI RP+ + G ++ F K+
Sbjct: 114 ADADGDTAYIRAKGEAEE-IVRESGLDW-TIFRPSVVFGEG----GEFVSFTKRLKGMFA 167
Query: 181 ----FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+PL G G TR QP++V D+ + AAL+ D +G+ YE+GGP++ T+ E+ +L+
Sbjct: 168 PGVPLYPLPGGGKTRFQPIHVEDLVPMLVAALEGD-EHVGETYEVGGPEVLTLREVTDLV 226
Query: 237 YDTIREYPHYVKVPFPVAK 255
Y+ + V +P P+A+
Sbjct: 227 YEAEEKGVTIVPLPMPLAR 245
>gi|71909743|ref|YP_287330.1| NAD-dependent epimerase/dehydratase [Dechloromonas aromatica RCB]
gi|71849364|gb|AAZ48860.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid
dehydrogenase/isomerase:dTDP-4-dehydrorhamnose
reductase:NmrA-like protein [Dechloromonas aromatica
RCB]
Length = 320
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 133/282 (47%), Gaps = 20/282 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G +GF+G Y+V +L++ G +V VP R E R L+ G +P + + + T+
Sbjct: 8 LLGGSGFVGTYIVNRLSQRGIEVTVPTRRRE---RTKALIMQPGVEMP-EADISCEKTLT 63
Query: 72 ATMAKANVVINLIGREYETR-----NYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
M + VINL+G + + F + + + ++I K G+ R + +S L
Sbjct: 64 ELMRGHDAVINLVGVLHSRDVVLPYSRDFAETHVELPKKIIAACKA-SGVRRLVHMSALH 122
Query: 127 ASSSSPSRVFSTKAAAEEAVLR---ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A PS +K E V+ EL T+ RP+ + G D L+ +A +KK FFP
Sbjct: 123 ADPKGPSEYLRSKGDGEALVMAAQGELD-VTVFRPSVIFGLGDSFLSMFASVLKKLPFFP 181
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G G R QPV+ DVA A +L D T G+ YEL GP I+T+ EL D +E
Sbjct: 182 L-GFGHARFQPVWAADVADAFVESLGDSAT-YGQAYELVGPKIYTLRELV----DYTKEL 235
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINA 285
P+++ A + L+ P P+ P EI++
Sbjct: 236 TGSTATIIPLSEGWAYLQAGLMWLAPHPMMSPDNLRSMEIDS 277
>gi|448453500|ref|ZP_21593843.1| NAD-dependent epimerase/dehydratase [Halorubrum litoreum JCM 13561]
gi|445807300|gb|EMA57385.1| NAD-dependent epimerase/dehydratase [Halorubrum litoreum JCM 13561]
Length = 298
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 44/300 (14%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-LMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G Y+ + LA G V R E+ P + + GD+ D ++I
Sbjct: 5 VAGGTGFIGSYLCRALADDGHAVTALSRSPEEAPEGVTGVTGDV----------TDYDSI 54
Query: 71 KATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + + V+NL+ E + N + ++ E + A E GG+ F+Q+S LG
Sbjct: 55 ASAVDGHDAVVNLVALSPLFEPDGGNRMHDRIHRGGTENLV-RAAEDGGVDGFVQLSALG 113
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---- 180
A + + K AEE ++RE L W TI RP+ + G ++ F K+
Sbjct: 114 ADPNGDTAYIRAKGEAEE-IVRESGLDW-TIFRPSVVFGEG----GEFVSFTKRLKGMFA 167
Query: 181 ----FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+PL G G TR QP++V D+ + AA+ D G G+ YE+GGP++ T+ ++ +L+
Sbjct: 168 PGVPLYPLPGGGKTRFQPIHVEDLVPMIAAAVTD-GEHAGETYEVGGPEVLTLRQVTDLV 226
Query: 237 YDTIREYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDN 295
Y+ ++ V +P P+AK + + +L VP FP+ D+ + D +DN
Sbjct: 227 YEAEKKGVTIVPLPMPLAK-IGLS---VLGAVPGFPM------GADQYRSLKFDNTTADN 276
>gi|350559844|ref|ZP_08928684.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349782112|gb|EGZ36395.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 313
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 132/285 (46%), Gaps = 14/285 (4%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TGF+GR++V +L G V + R E R LK+ L ++ +P D T+
Sbjct: 7 CILGGTGFVGRHIVARLTDRGVAVRILTRHPERH-RDLKV---LPEVTLASGDPHDPATL 62
Query: 71 KATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ A A+ VINL+G E F + + E+ A A G+ RF+Q+S L A
Sbjct: 63 EDFFAGADAVINLVGILNEQGRDGSGFRKAHTELTEK-ALAAATTAGVRRFVQMSALKAD 121
Query: 129 -SSSPSRVFSTKAAAEEAVLRELPW-ATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
PS +KA AE AV + T+ RP+ + G ED LN++A ++ F PL
Sbjct: 122 MPDPPSHYLRSKADAERAVFAASAFPVTVFRPSVIFGPEDSFLNRFAGLLRIAPFMPL-A 180
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
R PV+V DVA L DD ++ GK +EL GP +T+ EL R
Sbjct: 181 RADARFAPVFVGDVADHFVNCL-DDPSTFGKGFELCGPRSYTLRELVRYTARLTRRRRPI 239
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTI 291
V +P + A E + K PL R L +L + T +T+
Sbjct: 240 VPLPGWAGRLQATVFEFVPGK---PLSRDNLASLSVDSVCTGETL 281
>gi|91785578|ref|YP_560784.1| hypothetical protein Bxe_A0199 [Burkholderia xenovorans LB400]
gi|91689532|gb|ABE32732.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 317
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 146/312 (46%), Gaps = 24/312 (7%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+G ++V L + G V + R + RHL L+ I ++ + D +
Sbjct: 7 AIIGGSGFIGSHLVNALVEAGKDVRIATRR-RYNARHLTLL----PIDVIEADVFDPVQL 61
Query: 71 KATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ A+ VINL+ + R F ++ + +I A E G+ R + +S LG
Sbjct: 62 ARFVEGADCVINLVATLHGKRGTPYGPEFARMHVELPTKIVA-ACEGKGVHRLLHVSALG 120
Query: 127 ASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A + PS +K E+AV L W TI RP+ + G ED+ LNK+A + F PL
Sbjct: 121 ADPNGPSMYTRSKGDGEKAVHAANLAW-TIFRPSVVFGPEDQFLNKFAFLQRMFPVIPL- 178
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ QPVYV DVA A+ L D G+ YELGGP ++ + +L + D I ++
Sbjct: 179 AMPDAKFQPVYVGDVAKAIVNVLDLDAAG-GRTYELGGPTVYALEDLVKYCGDVIGKHAR 237
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+++P A+ A+ E+ P + + D +++ D ++S +LGI
Sbjct: 238 IIRLPEAFARLQALTFEM--------APGEPVISRDNLDSMKVDNVLS--GPLAPELGIE 287
Query: 306 PHKLKGYPTEYL 317
P ++ YL
Sbjct: 288 PASIETIAPIYL 299
>gi|344323314|gb|AEN14438.1| nucleoside-diphosphate-sugar epimerase [Lentinula edodes]
Length = 344
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 16/266 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFR----GCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
V GFLG+++ L++ S V + + + L G I P + D
Sbjct: 17 VICGAGFLGKHIATALSRASSAGAVTHQIQLASLHPEKLYSALKSTHGIIPPATIDITDK 76
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+T+ + A++V++L+G + + F+ + AE +A AKE G R + +S +GA
Sbjct: 77 STLLPAFSGASLVVSLVGIMHGSP-ADFDRIQWKGAENVAKAAKEAGA--RLVHVSAIGA 133
Query: 128 SSSSPSRVFSTKAAAEEAVL-----RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
+S TKA EEAV + ++RP+ + G ED N+++ + F
Sbjct: 134 DRASDIPYNRTKALGEEAVRDAYRGKAEKDVVVLRPSIVFGPEDDFFNRFSNLSQYLPFL 193
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKD----DGTSMGKIYELGGPDIFTVHELAELMYD 238
P+FG G +R QPVYV D+A AV ++ + GK E GGPDI T +E+ +L+ +
Sbjct: 194 PVFGGGKSRFQPVYVGDIARAVEIIARNVPAINAMVGGKTIECGGPDILTYNEIMQLVLN 253
Query: 239 TIREYPHYVKVPFPVAKAVAMPREIL 264
V +PF + K M E L
Sbjct: 254 YNHRTRPIVSLPFWMGKLQGMVMERL 279
>gi|223937357|ref|ZP_03629262.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
gi|223893908|gb|EEF60364.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
Length = 304
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 138/282 (48%), Gaps = 9/282 (3%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G +GF+G+ V+++L G Q + R R + G V + D ++
Sbjct: 5 VTGASGFVGQEVLEKLHAAGHQSRILAR-HPTSMRTRTQASEFGAEVHAG-DILDVASLA 62
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+ + VI+L+G E +FE+++ AE + A+ G+ RF+ +S +G +++
Sbjct: 63 RGLKGIDAVIHLVGIISELGESTFENIHIRGAENVVDAARI-AGVRRFVHMSAMGTRANA 121
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
SR TK AAEE V + TI RP+ + G +D +N +A+ + P+ G+G ++
Sbjct: 122 SSRYHKTKWAAEEYVRKSGLDYTIFRPSIIYGPKDLFVNLFAKISQLSPIMPVMGNGQSK 181
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
+QP+ V DVA AL + S+G+ YELGG D+ T+ ++ + + V +P
Sbjct: 182 LQPIPVSDVATCFVKALTEPA-SLGQTYELGGRDVLTLEQVIDEILLATNRRRLKVHIPL 240
Query: 252 PVAKAVAMPREI----LLKKVPFPLPRPGLFNLDEINAYTSD 289
+A++ A E LL K P PL L L E N S+
Sbjct: 241 SIARSQASLLEFAYPRLLGKAP-PLNHDQLIMLQEDNIGDSE 281
>gi|257091910|ref|YP_003165551.1| NADH dehydrogenase (ubiquinone) [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044434|gb|ACV33622.1| NADH dehydrogenase (ubiquinone) [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 321
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 122/231 (52%), Gaps = 16/231 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G +GF+G ++ L++ G +V +P R E+ + + L + ++ N D +
Sbjct: 8 LIGGSGFVGGWIASCLSERGVRVTIPTRRRENTKKLIML----PTVSMVEANIHDPQVLA 63
Query: 72 ATMAKANVVINLIGREYETRNY-----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + VINL+G ++T + F+ + + ++I +E+G + R + +S L
Sbjct: 64 QLVQGHDAVINLVGVLHDTDSRLPYGRGFQAAHVDLPKKIIAAMRENG-VRRLVHMSALR 122
Query: 127 ASSSSPSRVFSTKAAAEEAV---LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
A ++PS +K E AV + EL T+ RP+ + G +D LN +A+ ++ F P
Sbjct: 123 AGINAPSEYLRSKGDGEAAVRSAMNELD-VTMFRPSVIFGPDDAFLNMFAKLLRLFPVLP 181
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
L G GS R QPVYV DVA A +L +G + G+ YEL GP ++T+ E+ +
Sbjct: 182 L-GGGSARFQPVYVGDVARAFADSLT-NGATFGQTYELCGPKVYTLREMVD 230
>gi|448440308|ref|ZP_21588471.1| NAD-dependent epimerase/dehydratase [Halorubrum saccharovorum DSM
1137]
gi|445690204|gb|ELZ42419.1| NAD-dependent epimerase/dehydratase [Halorubrum saccharovorum DSM
1137]
Length = 298
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 122/255 (47%), Gaps = 25/255 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL-KLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G Y+ LA G +V R D P + GD+ D ++I
Sbjct: 5 VAGGTGFIGSYLCGALADGGHEVTALSRSPGDTPEGVASATGDV----------TDYDSI 54
Query: 71 KATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + V+NL+ E + N + ++ E + A E GG RF+Q+S LG
Sbjct: 55 AGAVEGQDAVVNLVALSPLFEPKGGNVMHDRIHRGGTENLV-RAAEDGGAERFVQLSALG 113
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLN----KWAQFVKKFN 180
A + K AAEE ++RE L W TI RP+ + G ++ F
Sbjct: 114 ADPDGDTAYIRAKGAAEE-IVRESGLDW-TIFRPSVVFGEGGEFVSFTKRLKGMFAPGIP 171
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
+PL G G TR QP++V D+ + AAL+ D +G+ YE+GGP+ T+ E+ +L+Y+
Sbjct: 172 LYPLPGGGKTRFQPIHVEDLVPMLVAALEGD-EHVGETYEVGGPETLTLREVTDLVYEAE 230
Query: 241 REYPHYVKVPFPVAK 255
+ + +P P+A+
Sbjct: 231 EKGVTILPLPMPLAR 245
>gi|448493942|ref|ZP_21609238.1| NAD-dependent epimerase/dehydratase [Halorubrum californiensis DSM
19288]
gi|445689680|gb|ELZ41907.1| NAD-dependent epimerase/dehydratase [Halorubrum californiensis DSM
19288]
Length = 298
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 142/299 (47%), Gaps = 42/299 (14%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-LMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G Y+ + LA G V R E+ P + + GD+ D ++I
Sbjct: 5 VAGGTGFIGSYLCRALADDGHAVTALSRSPEEAPEGVTGVSGDV----------TDYDSI 54
Query: 71 KATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + + V+NL+ E + N + ++ E + A E GG+ F+Q+S LG
Sbjct: 55 ASAVDGHDAVVNLVALSPLFEPDGGNRMHDRIHRGGTENLV-RAAEDGGVDGFVQLSALG 113
Query: 127 ASSSSPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN----- 180
A + + +K AE V EL W TI RP+ + G ++ F K+
Sbjct: 114 ADPNGDTAYIRSKGEAEGIVRESELDW-TIFRPSVVFGDG----GEFVSFTKRLKGMFAP 168
Query: 181 ---FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
+PL G G TR QP++V D+ + AA+ DD G+ YE+GGP++ T+ ++ +L+Y
Sbjct: 169 GVPLYPLPGGGKTRFQPIHVEDLVPMIAAAVTDD-EHAGETYEVGGPEVLTLRQVTDLVY 227
Query: 238 DTIREYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDN 295
+ ++ V +P P+AK + + +L VP FP+ D+ + D +DN
Sbjct: 228 EAEKKGVTIVPLPMPLAK-IGLS---VLGAVPGFPM------GADQYRSLKFDNTTADN 276
>gi|393235434|gb|EJD42989.1| NAD(P)-binding protein [Auricularia delicata TFB-10046 SS5]
Length = 311
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD---DN 68
+ G TGF+GR +V L G Q + +G P + P D
Sbjct: 7 IVGGTGFVGRNIVAHLRSKGPQYTL----------------RIGTRHPSRTEPEQVHADV 50
Query: 69 TIKATMAKA----NVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
T T+A+A VV++L G + + +F+ V A +A A+ + +S
Sbjct: 51 TQPDTLARAFTGAQVVVSLAG-YLQASDDAFDAVQRRGAGNVAAAARNA--GASLVHVSA 107
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+GA + S + TKA E+ VL ELP ATI+RP+ + G D ++A+ K F P+
Sbjct: 108 IGADAQSKVAYWRTKALGEQEVLAELPQATIVRPSLVFGPGDEFFGRFAKLAKVMPFLPV 167
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKD----DGTSMGKIYELGGPDIFTVHELAELMYDTI 240
F G +R QPVYV D+A V + GKI E GGP++FT EL EL+
Sbjct: 168 FDGGKSRFQPVYVGDIARLVELCARGSPEISTAVTGKIVEAGGPEVFTYRELMELVLKYS 227
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVP---FPLPRPGLFNLDEINAYTSDTIVSDNAL 297
+ +P + K A L+++P F L R + L N T+D + L
Sbjct: 228 NRRRPILSLPSSIGKFQAY----FLERLPPNLFSLTRDQVEQLRYDNVVTADPRLQPQCL 283
Query: 298 TFQDL 302
F D
Sbjct: 284 DFDDF 288
>gi|444509043|gb|ELV09161.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Tupaia chinensis]
Length = 247
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 66/85 (77%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG +GFLGRYVV L +MGSQV+VP R D HL+ MGDLGQI+ ++++ R
Sbjct: 52 SGVVATVFGASGFLGRYVVNYLGRMGSQVIVPHRCEAYDVMHLRPMGDLGQILFLEWSGR 111
Query: 66 DDNTIKATMAKANVVINLIGREYET 90
D ++I+ + +NVVINL+GR++ET
Sbjct: 112 DKDSIRQAVEHSNVVINLVGRDWET 136
>gi|336324017|ref|YP_004603984.1| NAD-dependent epimerase/dehydratase [Flexistipes sinusarabici DSM
4947]
gi|336107598|gb|AEI15416.1| NAD-dependent epimerase/dehydratase [Flexistipes sinusarabici DSM
4947]
Length = 297
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 12/244 (4%)
Query: 11 TVF--GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
TVF G TGF+G V+++L K +V V R + +L + I+P++ + +
Sbjct: 4 TVFLTGATGFVGNEVLEELLKKNYRVKVLVRDKD------RLKENSADIIPVEGDVLNPE 57
Query: 69 TIKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + M + VI+L+G RE+ ++ +FE + HF A + GI RFI +S G
Sbjct: 58 SFRKEMEDVDTVIHLVGIIREFPSQGITFEKL-HFEATKNVVDTAVSNGIKRFIHMSANG 116
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A + + TK AEE V TI RP+ + G D +N A +KK F FG
Sbjct: 117 ARENVVTDYHKTKYKAEEYVRNSGLTYTIFRPSLIYGPGDSFVNMLADMIKKLPVFSYFG 176
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G ++QPV V +VA ++ T GK Y + G ++T EL ++ D I +
Sbjct: 177 KGDYKMQPVSVYEVAEIFAESIP-ISTMYGKTYSVCGDKVYTYRELLNIIMDVINKKRLL 235
Query: 247 VKVP 250
V VP
Sbjct: 236 VSVP 239
>gi|413964205|ref|ZP_11403432.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. SJ98]
gi|413930037|gb|EKS69325.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. SJ98]
Length = 318
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 16/259 (6%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+G ++V L +G V V R + HL L+ + ++ + D +
Sbjct: 7 ALIGGSGFIGSHLVNALVDLGKNVRVATR-RRSNAAHLTLL----PVDVIETDVHDPVQL 61
Query: 71 KATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
A + +++ VINL+G R + F + + +IA A E G+ R + +S +G
Sbjct: 62 AAFIDQSDAVINLVGILQGRRDDPYGPEFAKAHVELPRKIAA-ACEAKGVRRLLHMSAIG 120
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
A + PS +K E+ ++RE L W T+ R + + G ED LLN++A + F PL
Sbjct: 121 ADPAGPSMYLRSKGDGEK-IVRESGLDW-TVFRSSVVFGPEDNLLNQFAFLERMFPVIPL 178
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
+ QPV+V DVA A+ L D + G +YEL GP ++T+ EL TI ++
Sbjct: 179 -ACADAQFQPVFVGDVAKAMVNVLDLDAAN-GHVYELAGPSVYTLAELVRFAGATIGKHS 236
Query: 245 HYVKVPFPVAKAVAMPREI 263
+K+P + + AM E+
Sbjct: 237 RIIKLPESLGRLQAMTMEM 255
>gi|237755628|ref|ZP_04584242.1| NADH dehydrogenase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692223|gb|EEP61217.1| NADH dehydrogenase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 282
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 143/298 (47%), Gaps = 33/298 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
++G+ GF+GRY+V+ L + +L P R + + ++ DL I ++ N +N I+
Sbjct: 5 IYGSYGFVGRYIVRNLYNKVNLIL-PARNIK---KIQEVFKDLSLINYVQIN---ENDIQ 57
Query: 72 ATMAKAN--VVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
+ K N +VINLIG ET N +FE V HF + A + G+ +FIQ+S LGA
Sbjct: 58 EPIYKFNPDIVINLIGILTETSNQTFEKV-HFEITKNLVDASKAVGVKKFIQMSALGADV 116
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF-GDG 188
+S SR TKA AEE +++ I RP+ +IG E +L + +F K P+F
Sbjct: 117 NSKSRYLKTKAMAEEYIIKSGLNYVIFRPSIIIGREQKLFEDF-RFYSKIT--PIFMAPY 173
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
++QPV V+DVA A D + +I+EL G ++ EL + D
Sbjct: 174 DAKVQPVSVLDVADCFEKATISDIKN--EIFELCGNEVIDYVELFKFALD---------- 221
Query: 249 VPFPVAKAVAMPREILLKKVPFP----LPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
F K V MP K+ P +P+P + LD+ D + S +DL
Sbjct: 222 --FTGVKRVVMPVPKKTFKLLLPVFSLMPKP-IMTLDQYYMLEKDNVCSGRYKGVKDL 276
>gi|448430042|ref|ZP_21584738.1| NAD-dependent epimerase/dehydratase [Halorubrum tebenquichense DSM
14210]
gi|445689577|gb|ELZ41808.1| NAD-dependent epimerase/dehydratase [Halorubrum tebenquichense DSM
14210]
Length = 298
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 130/259 (50%), Gaps = 33/259 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-LMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G Y+ LA+ V R E+ P + + GD+ D +I
Sbjct: 5 VAGGTGFIGSYLCGALAEDDHAVTALSRSPEETPEGVTGVSGDV----------TDYGSI 54
Query: 71 KATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
++ + + V+NL+ E E N + ++ E + A E GG+ RF+Q+S LG
Sbjct: 55 ESAVEGHDAVVNLVALSPLFEPEGGNRMHDRIHRGGTENLV-RAAEDGGVERFVQLSALG 113
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---- 180
A + + +K AE +++RE L WA I RP+ + G ++ F K+
Sbjct: 114 ADPNGDTAYIRSKGEAE-SIVRESDLDWA-IFRPSVVFGEG----GEFVSFTKRLKGMFA 167
Query: 181 ----FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+PL G G TR QP++V D+ + AA+ D+ +G+ YE+GGP++ T+ ++ +L+
Sbjct: 168 PGVPLYPLPGGGKTRFQPIHVEDLVPMIAAAVTDE-EHVGETYEIGGPEVLTLRQVTDLV 226
Query: 237 YDTIREYPHYVKVPFPVAK 255
Y+ ++ + +P P+AK
Sbjct: 227 YEAEKKGVTILPLPMPLAK 245
>gi|206601933|gb|EDZ38415.1| Putative NAD-dependent epimerase/dehydratase [Leptospirillum sp.
Group II '5-way CG']
Length = 298
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 11/250 (4%)
Query: 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
N D ++ + V++L G ET++ S+E + H R A + G + R + +
Sbjct: 51 NVTDRGSLDPVFDGVDTVLHLTGILAETKSQSYEAI-HVDGTRNVLDASKAGRVSRIVYL 109
Query: 123 SCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
S +GAS + SR TKA AE+ + TI RP+ + G +D+ LN +A K +
Sbjct: 110 SAIGASRMARSRYHRTKAEAEDLLKNSGMDVTIFRPSVVFGKDDKFLNLFAGMGKTLHVL 169
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
PL GDG +R+ PV+V D+ +V +++ T+ G+ Y++GG I+T EL E + ++
Sbjct: 170 PLIGDGKSRVHPVWVNDLVESVLESMRKPETA-GRTYQIGGGRIYTYRELMETLKRSLHF 228
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
+ P + + +A +E LL VPF D + D + N L
Sbjct: 229 RAIVLPQPEALLRVMAGMQEALL-PVPF-------LTRDMVTMALEDNVADPNDLVVS-F 279
Query: 303 GIVPHKLKGY 312
G PH ++ Y
Sbjct: 280 GKSPHPVEAY 289
>gi|291288347|ref|YP_003505163.1| NAD-dependent epimerase/dehydratase [Denitrovibrio acetiphilus DSM
12809]
gi|290885507|gb|ADD69207.1| NAD-dependent epimerase/dehydratase [Denitrovibrio acetiphilus DSM
12809]
Length = 294
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 134/281 (47%), Gaps = 16/281 (5%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFR-GCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G V+ L K G + R G E+ +H + +K + D ++
Sbjct: 6 VTGATGFVGNAVLASLNKHGYVPVALVRHGSENKLKH--------SVEMVKGDVMDKASL 57
Query: 71 KATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ V++L+G REY +R +FE ++H + I A E G I R+I +S G
Sbjct: 58 LKALEGIYAVVHLVGIIREYPSRGVTFEKMHHTATKNIVEAAAEMG-IKRYIHMSANGTR 116
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ S TK AE+ V TI RP+ + G +D +N A ++K+ F FGDG
Sbjct: 117 LNAVSDYHITKQLAEDEVKNSGLDYTIFRPSLVYGQDDSFINMLAGYMKRTPVFSYFGDG 176
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
S +QPV+V DVA A+ D+ ++ IY L G +++T L L+ + + + +
Sbjct: 177 SYPMQPVFVGDVAECFVKAI-DNQSTTKMIYPLCGKNVYTYKHLLRLVGKALGK--NIIL 233
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSD 289
+P P A+ + K FP+ + L E N +SD
Sbjct: 234 LPVP-EFAIKTGISLFGKANWFPITKDQFIMLTEGNTCSSD 273
>gi|88811003|ref|ZP_01126259.1| NAD-dependent epimerase/dehydratase [Nitrococcus mobilis Nb-231]
gi|88791542|gb|EAR22653.1| NAD-dependent epimerase/dehydratase [Nitrococcus mobilis Nb-231]
Length = 319
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 147/301 (48%), Gaps = 27/301 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+GR++ LA ++ V R E + R L + +L I + D +
Sbjct: 7 CVLGGTGFVGRHIAGHLANTRVRLRVLTRNRERN-RQLLPIPNLQLIEVAGY---DQERL 62
Query: 71 KATMAKANVVINLIGREYETRN--YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
A VINL+G E R + FED + + E + + G+ R + +S LGA+
Sbjct: 63 TEQFAGCQAVINLVGVLNEGRGAGHRFEDAHVKLPEHVIAACRT-AGVGRLLHMSALGAA 121
Query: 129 SSSPSRVFSTKAAAE---EAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
+ SR TKAA E +A E T+ RP+ + G D L+++AQ ++ FFP+
Sbjct: 122 PDAASRYQQTKAAGECVVKAAHSENLAVTVFRPSVIFGPGDSFLSRFAQLLQ---FFPVL 178
Query: 186 GDGSTRI--QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
+ R+ +PVYV DVA A +L+D+ T G+ YEL GP +FT+ EL D +
Sbjct: 179 LLPTPRLRLKPVYVGDVAKAFVQSLEDEAT-FGQCYELCGPKVFTLRELV----DYVATL 233
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
++ + +A + + LL++VP +P ++ D + D I SD+ L LG
Sbjct: 234 LGVRRLIIGLNEAWSQRQARLLERVP---GKP--YSYDNYLSSKVDNICSDDGLA--RLG 286
Query: 304 I 304
I
Sbjct: 287 I 287
>gi|253997359|ref|YP_003049423.1| NAD-dependent epimerase/dehydratase [Methylotenera mobilis JLW8]
gi|253984038|gb|ACT48896.1| NAD-dependent epimerase/dehydratase [Methylotenera mobilis JLW8]
Length = 315
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 119/226 (52%), Gaps = 9/226 (3%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G +V +L G V V R + +HL L+ + + ++ + D + +
Sbjct: 7 CVLGGSGFVGSAIVAKLDAAGYAVTVLTRR-REAAKHLFLLPN---VTVVECDVLDYHAL 62
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ + VINLIG ++ + SF ++H + ++A I + G I R IQ+S LGA
Sbjct: 63 NTVLRGTDAVINLIGILHQGHHASFNAIHHQLPAQLAKICADLG-IKRLIQMSSLGAHEH 121
Query: 131 SPSRVFSTKAAAEEAV--LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+PS+ TKAA E A+ L++ TI +P+ + G D+ N +A +K L
Sbjct: 122 APSQYLRTKAAGEAALKALQDKINITIFKPSIIFGRGDKFTNLFATLIKLLPVVVL-AKP 180
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+ + QP++V DVA+ +L++ T G+ YEL GP ++T EL +
Sbjct: 181 NAKFQPIWVEDVASCFVNSLQNMDT-YGQTYELAGPKVYTFRELLQ 225
>gi|34497488|ref|NP_901703.1| NADH-ubiquinone oxidoreductase [Chromobacterium violaceum ATCC
12472]
gi|34103343|gb|AAQ59705.1| probable NADH-ubiquinone oxidoreductase [Chromobacterium violaceum
ATCC 12472]
Length = 313
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 146/310 (47%), Gaps = 24/310 (7%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFR--GCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ G +GF+GR++ QLA G ++ + R G D +++ ++V + D
Sbjct: 7 CLIGGSGFIGRHLAAQLASRGHRITIASRRTGLPD----FRVLPS-AELVSADIH--DPG 59
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ +A + V++++G + +R FE + + E+I + G + R + +S LGA+
Sbjct: 60 QLAGLIAGHDAVVSMVGILHGSRA-QFEKAHAQLPEKIVDACRRQG-VRRLVHVSALGAA 117
Query: 129 SSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+PS TKA E AV L W TI+RP+ + G D LN +A K+ PL G
Sbjct: 118 QDAPSDYQQTKALGELAVESSGLDW-TILRPSVVFGHGDAFLNMFAGLQKRLPVLPLAGA 176
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G ++ PV+V DVA AV L T G+ +L GP+ +T+ +LA L +P V
Sbjct: 177 G-CKMAPVWVEDVARAVCECLARKETE-GRKLDLAGPETYTLAQLARLA-GRASGHPRPV 233
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
F + +AM + L++ LP P L + D + + D VSD LG P
Sbjct: 234 ---FGLPYGLAMLQAALMEW----LPGPTLMSRDNVRSLQWDN-VSDQPFPSALLGFEPA 285
Query: 308 KLKGYPTEYL 317
L +L
Sbjct: 286 ALSALAPGWL 295
>gi|289549043|ref|YP_003474031.1| NAD-dependent epimerase/dehydratase [Thermocrinis albus DSM 14484]
gi|289182660|gb|ADC89904.1| NAD-dependent epimerase/dehydratase [Thermocrinis albus DSM 14484]
Length = 319
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 135/286 (47%), Gaps = 21/286 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GRY+V+ L + G +V R D + L + D G++ K + D+ I+
Sbjct: 9 VTGATGFVGRYIVRGLLEKGYKVGALVR----DTQKLNRVFD-GKVEGYKVDFLDEEAIR 63
Query: 72 ATMAKAN--VVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ + V++LIG E + R Y F V HF+ ++ H G+ R + +S LG
Sbjct: 64 KAVEDFSPYAVVHLIGILLEDKKRGYDFYTV-HFLYSKVLYSVLAHTGVRRVLHMSSLGT 122
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWA-TIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
+PS TK AEE L+ L TI RP+ ++G E RL + + K PL G
Sbjct: 123 HRDAPSMYHRTKYMAEE-FLKTLKLDFTIFRPSMILGPEQRLFSDMWRITKYIPVVPLPG 181
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G QPV V DVA A +L+D T GK YEL GP + +LM DT+
Sbjct: 182 GGHYLFQPVDVRDVACAFVESLEDPST-FGKTYELCGPQRVS---FRQLMKDTMELLGRK 237
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIV 292
V V PV K+ +L ++ P P F+ D+I D +
Sbjct: 238 V-VFLPVPKSFMYTAGLLASEILSPPP----FSSDQILMMWRDNVC 278
>gi|39995493|ref|NP_951444.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter sulfurreducens PCA]
gi|409910935|ref|YP_006889400.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter sulfurreducens KN400]
gi|39982256|gb|AAR33717.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter sulfurreducens PCA]
gi|298504493|gb|ADI83216.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter sulfurreducens KN400]
Length = 294
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 117/230 (50%), Gaps = 14/230 (6%)
Query: 68 NTIKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+T +A + +NL+G RE+ R +FE + H A R A GI R +Q+S L
Sbjct: 53 DTFAGAVAGCDATVNLVGIIREFPGRGITFEKL-HVEATRNVVEAARAAGIRRHLQMSAL 111
Query: 126 GASSSSPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+ + TK AEE V + EL W TI RP+ + G + ++ A FV++F P+
Sbjct: 112 ATRPDATAAYHRTKWRAEEVVRQSELDW-TIFRPSLIFGPKGAFVDMLAGFVRRFPAVPV 170
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
GDG+ R+QPV V DVA AL D + G+ YEL GPD T +E+ +++ + +
Sbjct: 171 VGDGTYRLQPVSVDDVARCFALAL-DMPETFGQTYELCGPDRLTYNEVLDIIGRVLGK-G 228
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294
H VK+P P+ + + I+ FPL +D+I T + I S+
Sbjct: 229 HVVKIPQPLG-LLKLVVPIMQGFSFFPL------TMDQITLLTEENICSN 271
>gi|336376990|gb|EGO05325.1| hypothetical protein SERLA73DRAFT_44019 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390035|gb|EGO31178.1| hypothetical protein SERLADRAFT_364924 [Serpula lacrymans var.
lacrymans S7.9]
Length = 323
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 129/277 (46%), Gaps = 22/277 (7%)
Query: 9 IATVFGTTGFLGRYVVQQLAK-MGSQVLVPFRGCEDDPRH-------LKLMGDLGQIVP- 59
I V GFLG ++ + +A GS P R + RH L+ + D +++P
Sbjct: 5 IRVVVCGAGFLGSHIAKTIAAAQGSNF--PNRLVQLSSRHPQTVHAALETVIDHRRLLPP 62
Query: 60 MKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRF 119
+ T+ A ANVV++L+G T FE + AE IA A+ +
Sbjct: 63 QAVDITKPQTLDAAFHGANVVVSLVGIMNGTPE-DFERIQWRGAENIANAARRA--NAKL 119
Query: 120 IQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKF 179
+ S +GA +S TKA EE V P ATI+RP+ + G D ++A+ +
Sbjct: 120 VHFSAIGADKASHIPYVRTKALGEEVVFEACPDATIIRPSLVFGPGDSFFTRFARLSQLL 179
Query: 180 NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT----SMGKIYELGGPDIFTVHELAEL 235
F P+FG G++R QP YV D+A AV +D GKI E GGP++FT E+ L
Sbjct: 180 PFLPVFGGGTSRFQPDYVGDLARAVEIISRDSTMIKEHVAGKILEAGGPEVFTYREIMNL 239
Query: 236 MYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPL 272
+ R + +PF V M + +L+++P L
Sbjct: 240 VLQYTRRRRPIISIPF----GVGMLQGSMLERLPQSL 272
>gi|225849255|ref|YP_002729419.1| NADH dehydrogenase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643294|gb|ACN98344.1| NADH dehydrogenase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 283
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 24/292 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
++G+TGF+GRYVV+QL +G L F ++ + + GD + +KFN + +N I
Sbjct: 5 IYGSTGFVGRYVVRQL--IGKVEL--FLAARNESKAKSIFGD--SVKAVKFNDKIENPI- 57
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+VVINLIG E+ N +FE ++ + +R+ +K +FIQ+S LGA +S
Sbjct: 58 -FEVNPDVVINLIGILKESGNNTFEYTHYEIPKRLIDASKNLNA-KKFIQMSALGADINS 115
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S TKA AEE ++ I RP+ ++G E +L + ++ K FF +
Sbjct: 116 KSMYQKTKAMAEEYLISSGLNYVIFRPSIILGKEQKLFEDFKKYSKIAPFF--LAPYDAK 173
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
+QPV V DVA A + + +I+EL G + EL E Y+ +
Sbjct: 174 VQPVNVYDVAECFEKATLTEIKN--EIFELCGNKVINYKELFEFAL-------KYLNIKR 224
Query: 252 PVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
PV + +P++ L +P F L + LD+ D + S +DL
Sbjct: 225 PV---IPVPKKAFLFMIPVFSLMPDPIMTLDQYYMLQEDNVCSGKYKGVKDL 273
>gi|448363407|ref|ZP_21552007.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
gi|445646220|gb|ELY99209.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
Length = 309
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 139/303 (45%), Gaps = 25/303 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRG-CEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G ++ +LA+ G +V R +D L DL ++ +I
Sbjct: 5 VAGGTGFIGTHLCTELAERGHEVTALSRNPATEDAAELPDEVDLSTGDVSAYD-----SI 59
Query: 71 KATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+A + ++NL+ Y+ + + + H A E G+ RF+QIS LGA
Sbjct: 60 VDAVAGHDAIVNLVALSPLYQPPDGTDHETVHLGGTENLVRAAEENGVDRFLQISALGAD 119
Query: 129 SSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
P+ TK A E+++RE L W TI+RPA + G L Q + L G
Sbjct: 120 PDGPTAYIRTKGRA-ESIVREAALSW-TIVRPAVVFGDGGEFLTFAKQLTTPY-LTGLPG 176
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G TR QP++V D A + AL+DD + +G+ YELGGP + T+ + EL+Y+
Sbjct: 177 GGKTRFQPIWVGDFAPLLADALEDD-SHVGRTYELGGPQVVTLADATELVYEAEDRPVTI 235
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306
+ +P + K + + L VP F D+ + D V++N + Q G+ P
Sbjct: 236 LPIPMALTK-LGLAAADSLPFVP--------FGADQARSLEFDNTVAENDV--QAFGVEP 284
Query: 307 HKL 309
L
Sbjct: 285 TDL 287
>gi|188997137|ref|YP_001931388.1| NAD-dependent epimerase/dehydratase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932204|gb|ACD66834.1| NAD-dependent epimerase/dehydratase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 287
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 146/294 (49%), Gaps = 25/294 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
++G+ GF+GRY+V+ L + +L P R + + ++ DL I ++ N ++ I+
Sbjct: 5 IYGSYGFVGRYIVRNLYNKVNLIL-PARNIK---KIQEVFKDLSLINYVQIN---EDNIQ 57
Query: 72 ATMAKAN--VVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
+ K N +VINLIG ET N +FE V HF + A + G+ +FIQ+S LGA
Sbjct: 58 EPIYKFNPDMVINLIGILTETSNQTFEKV-HFEITKSLVDASKAVGVKKFIQMSALGADI 116
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF-GDG 188
+S SR TK AEE +++ I RP+ +IG E +L + +F K P+F
Sbjct: 117 NSKSRYLKTKTMAEEYIIKSGLNYVIFRPSIIIGREQKLFEDF-RFYSKIT--PIFMAPY 173
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
++QPV V+DVA A+ D + +I+EL G ++ EL + D I +
Sbjct: 174 DAKVQPVSVLDVADCFEKAVISDIKN--EIFELCGNEVINYVELFKFALDFI----GVKR 227
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
V PV K ++LL F +P+P + LD+ D + S +DL
Sbjct: 228 VVMPVPKKTF---KLLLPIFSF-MPKP-IMTLDQYYMLDKDNVCSGKYKGVKDL 276
>gi|414341234|ref|YP_006982755.1| oxidoreductase [Gluconobacter oxydans H24]
gi|411026569|gb|AFV99823.1| oxidoreductase [Gluconobacter oxydans H24]
Length = 324
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 139/310 (44%), Gaps = 21/310 (6%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD---LGQIVPMKFNPRDD 67
V G GF+GR V++L G V R +P ++ +G G++ +K + D
Sbjct: 20 AVLGGGGFIGRSFVRKLVATGHVV----RIGSQNPEAIQGLGKARGTGRVEFLKVSVSDA 75
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ + A+ +NL+ T + + +A + G+ +++ +S +GA
Sbjct: 76 DQLDRLFDGADAAVNLV--SVMTPDIRVLHKINVDGAHLAAVRARRAGVKQYVHMSAIGA 133
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
S +SP +K AAE+ V R P A ++RP+ + G ED N +A P+F
Sbjct: 134 SLTSPGAYGRSKGAAEQVVRRVFPDAGLLRPSVVFGPEDSFFNLFALIAAVSPVLPVFAQ 193
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
T QPV+V DVA A+ L+ + G+I E GGPDI ++ ++ + + +
Sbjct: 194 -HTHYQPVFVEDVAEALLRLLEPE--HAGRIVEAGGPDILSMRDMMAFVLEASGRH---- 246
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
++ P+ VA +L+K+P L D++ + D +V Q L I P
Sbjct: 247 RLLLPIPGVVARFEASVLEKLP-----GHLLTRDQVAMMSVDNVVHPGLDNLQTLDIHPI 301
Query: 308 KLKGYPTEYL 317
++ EYL
Sbjct: 302 SMRMVVPEYL 311
>gi|91776612|ref|YP_546368.1| NAD-dependent epimerase/dehydratase [Methylobacillus flagellatus
KT]
gi|91710599|gb|ABE50527.1| NAD-dependent epimerase/dehydratase [Methylobacillus flagellatus
KT]
Length = 321
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G +V +L+ G V V R E +HL L+ ++ FN + ++
Sbjct: 8 CVVGGSGFVGSALVHRLSTAGYDVKVLTRRRESS-KHLILLPNVQVTECDVFN---EASL 63
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ + VINL G +E+ N +FE ++ +A RIA I + G + R + +S L AS+
Sbjct: 64 SGQLHGQDAVINLAGILHESGNATFESIHVDLATRIADICCKQG-VPRLLHMSALKASAD 122
Query: 131 SPSRVFSTKAAAEEAVLRELP--WATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ S +KAA E+AVLR T+ RP+ + G D L+ A V N P+
Sbjct: 123 AKSAYLRSKAAGEQAVLRRADELQVTVFRPSVIFGRGDHFLSMLANVV---NMMPVVAVA 179
Query: 189 --STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
+ + QP++V DVA AL++ T G+ +LGGP ++T+ +L EL
Sbjct: 180 KPNAKFQPIWVEDVAYVFLTALENVST-YGRSIDLGGPQVYTLKQLIEL 227
>gi|300710359|ref|YP_003736173.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|448294683|ref|ZP_21484762.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|299124042|gb|ADJ14381.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|445586360|gb|ELY40642.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
Length = 289
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 37/294 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR++ +LA+ G V R P L D+ R D T +
Sbjct: 5 VTGGTGFIGRHLCAKLAQRGHDVTALAR----SPDASSLPADVAV-------ERGDVTDR 53
Query: 72 ATM--AKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
T+ A +VV+NL+ +E + + H R A E G+ R +Q+S LGA
Sbjct: 54 GTLDFAGQDVVVNLVALSPLFEPKGEKTHESVHLDGTRNVVDAAEAAGVSRLVQMSALGA 113
Query: 128 SSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFP 183
P+ K AE V EL W TI RP+ + G ++ +F +K P
Sbjct: 114 DPDGPTAYIRAKGKAERVVEASELDW-TIFRPSVVFGDG----GEFVEFTRKLTPPVIAP 168
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G G TR QP++V D+A+ + A++D+ +G+ YE+GGP++ T+ E+A+L
Sbjct: 169 LPGGGRTRFQPIWVEDIASLLADAVEDE-RHVGETYEIGGPEVLTMAEVAKLSRGG---- 223
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297
VP P+ A A + +PF +P F D++ + D +N L
Sbjct: 224 -GVTVVPIPM--AFAKIGSAAIDPLPF-IP----FGTDQVRSLEFDNTTRENDL 269
>gi|407405938|gb|EKF30669.1| hypothetical protein MOQ_005519 [Trypanosoma cruzi marinkellei]
Length = 373
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 14/238 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGD--LGQIVPMK 61
G+ FG TG LG +V G ++PFR G R L++ GD +GQ
Sbjct: 29 GVNVVTFGATGILGMHVHHLCCYHGFTSILPFRFRAGLASGVRTLRMAGDGTVGQNFDTD 88
Query: 62 FNPRDDNTIKATMAKANVVINLIGR-------EYETRNYSFEDVNHFMAERIAGIAKEHG 114
+ + +K+ + K + VIN++G E +S E +N +A +E G
Sbjct: 89 YEIDKEFVVKSILEKVDNVINVVGAWQEPAVYENSQSWFSMEAINVEWPRMLARWCREMG 148
Query: 115 GIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
I+R +S +GA +SPS++ K AE AVL E P ATI+R + D +K+ +
Sbjct: 149 -ILRLTHMSMVGADLNSPSKLLRQKREAEIAVLEEFPTATIIRGTDIFSENDFSYSKYLK 207
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHEL 232
+ P+ G QPV+ D+A A +L D T G+I ELGGP FT ++L
Sbjct: 208 AQRYLKIVPVPNRGQRIHQPVFAGDLAEAACRSLLLDHTE-GRIAELGGPVRFTTNDL 264
>gi|381160326|ref|ZP_09869558.1| nucleoside-diphosphate-sugar epimerase [Thiorhodovibrio sp. 970]
gi|380878390|gb|EIC20482.1| nucleoside-diphosphate-sugar epimerase [Thiorhodovibrio sp. 970]
Length = 312
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 29/312 (9%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TGF+GR + +L G Q +P R R L+L L I D ++
Sbjct: 8 CILGGTGFVGRELALRLLACGYQCQLPTRRVHRH-RDLRL---LPGITLQPITTLDQASL 63
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS-- 128
A ++V+NLIG E+ SF V+ + ER+ A+E G+ R + +S L A
Sbjct: 64 TEAFANCDLVVNLIGILNESARTSFRQVHVELVERVLAAARE-AGVPRLLHMSALHACPP 122
Query: 129 --------SSSPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNKWAQFVK-K 178
SS PS +K A E L + P T RP+ + G D L N++A +
Sbjct: 123 GQETTASPSSPPSEYLKSKGAGEALALAAKTPATTAFRPSVIFGRHDSLFNRFAGLIDWT 182
Query: 179 FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD 238
FFPL G+ R PV+V DVA A+ + D S+G+ Y+L GP ++ EL E
Sbjct: 183 PGFFPLACSGA-RFAPVWVGDVAEAMVRTI-DRPESIGRAYDLCGPRTLSLRELVE-YSA 239
Query: 239 TIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
T+R V++ ++ A + L +++P +P F +D + D++ SD+
Sbjct: 240 TLRG--RQVRI-IELSDKAARRQARLFERLPG---KP--FTMDNYRSLQIDSVCSDSD-G 290
Query: 299 FQDLGIVPHKLK 310
Q+LGI P ++
Sbjct: 291 LQELGITPTDIE 302
>gi|344199924|ref|YP_004784250.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrivorans
SS3]
gi|343775368|gb|AEM47924.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrivorans
SS3]
Length = 348
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 145/330 (43%), Gaps = 53/330 (16%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+GR++ ++L++ G V + R E + +L + L + ++ + D +
Sbjct: 7 CILGGSGFVGRHLAERLSQGGHSVRILTRNRERNRENLLV---LPGVEVVEADVHDPIAL 63
Query: 71 KATMAKANVVINLIGREYET----------RNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+ + NVVINL+G E R+ FE NH R+ H GI R +
Sbjct: 64 EKQLEGCNVVINLVGILNENKPGREDYPPERHGDFEK-NHIELPRLVANTCGHLGIPRLL 122
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLR-----------------ELPWA-----TIMRP 158
+S LGA+ PS +K EE + + +L W T RP
Sbjct: 123 HMSALGANPIGPSAYLRSKGIGEEIIRQSGENSAEMGHFNYLTGPKLLWGRGLKVTSFRP 182
Query: 159 AAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKI 218
+ + G DR N++AQ ++ FF + ++QPV+V DV +A ++ DD + GK
Sbjct: 183 SVIFGEGDRFFNRFAQLLRSIPFFIPMAGTNAKMQPVWVEDVVSAYVQSI-DDEKTYGKA 241
Query: 219 YELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFP-LPRPGL 277
Y+L GP ++T+ EL I + + P+ V + +++K+P L R L
Sbjct: 242 YDLCGPKVYTLGELMAYTQSLIGTH----RAIVPLGNFVGNLQASIMEKLPGKVLTRDNL 297
Query: 278 FNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+L DN T +DL V H
Sbjct: 298 RSLS-----------VDNICTRKDLADVFH 316
>gi|453330508|dbj|GAC87254.1| oxidoreductase [Gluconobacter thailandicus NBRC 3255]
Length = 324
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 138/307 (44%), Gaps = 15/307 (4%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G GF+GR V++L G V + + E+ K G G++ +K + D + +
Sbjct: 20 AVLGGGGFIGRSFVRKLVATGHVVRIGSQNPEEIQGFGKARGT-GRVEFLKVSVSDADQL 78
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
A+ +NL+ T + + +A + G+ +++ +S +GAS +
Sbjct: 79 DRLFDGADAAVNLV--SVMTPDIRVLHKINVDGAHLAAVRARRAGVKQYVHMSAIGASLT 136
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
SP +K AAE+ V R P A ++RP+ + G ED N +A P+F T
Sbjct: 137 SPGAYGRSKGAAEQVVRRVFPDAGLLRPSVVFGPEDSFFNLFALIAAVSPVLPVFAQ-HT 195
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
QPV+V DVA A+ L+ + G+I E GGPDI ++ ++ + + + ++
Sbjct: 196 HYQPVFVEDVAEALLRLLEPE--HAGRIVEAGGPDILSMRDMMAFVLEVSGRH----RLL 249
Query: 251 FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLK 310
P+ VA +L+K+P L D++ + D +V Q L I P ++
Sbjct: 250 LPIPGVVARFEASVLEKLP-----GHLLTRDQVAMMSVDNVVHPGLDNLQTLDIHPISMR 304
Query: 311 GYPTEYL 317
EYL
Sbjct: 305 MVVPEYL 311
>gi|404497992|ref|YP_006722098.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter metallireducens GS-15]
gi|418067235|ref|ZP_12704583.1| NAD-dependent epimerase/dehydratase [Geobacter metallireducens
RCH3]
gi|78195590|gb|ABB33357.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter metallireducens GS-15]
gi|373559113|gb|EHP85422.1| NAD-dependent epimerase/dehydratase [Geobacter metallireducens
RCH3]
Length = 294
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 124/246 (50%), Gaps = 19/246 (7%)
Query: 14 GTTGFLGRYVVQQLAKMGSQV--LVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
G TGF+G +V + L + G ++ LV R + + GD+ ++ +T
Sbjct: 7 GGTGFIGGHVRKALLEAGHRIRLLVHRRHEGVEAGVEQAEGDVTRL----------DTFA 56
Query: 72 ATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
+ + INL+G RE+ R +F+ + H A + A GI R +Q+S LG+
Sbjct: 57 TAVEGCDATINLVGIIREFPGRGMTFDKL-HVEATQNVVEAARRAGIRRHLQMSALGSRP 115
Query: 130 SSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++ SR TK AEE V L W TI RP+ + G +D +NK A +++ + P+ GDG
Sbjct: 116 NATSRYHQTKWRAEEEVRASGLEW-TIFRPSIVFGPKDDFINKLAGYIRSYPAVPVIGDG 174
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
R+QPV DVA AL+ T +G+ YEL GPD + ++L + + + + H K
Sbjct: 175 KYRLQPVAADDVARCFVLALEKPET-VGQAYELCGPDRISYNDLLDTIGRIVGK-GHVPK 232
Query: 249 VPFPVA 254
VP P+
Sbjct: 233 VPNPLG 238
>gi|313672323|ref|YP_004050434.1| nad-dependent epimerase/dehydratase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939079|gb|ADR18271.1| NAD-dependent epimerase/dehydratase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 296
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 137/315 (43%), Gaps = 38/315 (12%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT 73
G TGF+G + ++L + G V V R D + LK+ + +I K + D ++
Sbjct: 8 GATGFVGTEITRKLIEKGYIVKVLVR----DEKRLKVKSE--KIEIAKGDILDAESVLKG 61
Query: 74 MAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
++ +VVINL+G RE+ R +FE++ HF+A + A GI RFIQ+S G +
Sbjct: 62 ISGCDVVINLVGIIREFPERGITFENM-HFVATKNVVDAANRSGISRFIQMSANGTRKDA 120
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
S TK AEE + TI RP+ + G D +N F+KK F FGDG
Sbjct: 121 VSNYHKTKYRAEEYLKNSNLIYTIFRPSLIYGENDSFINMLNNFMKKTPVFSYFGDGGYL 180
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
+QPV V +VA ++ D + + + + G ++ T +L + + D
Sbjct: 181 MQPVSVTEVADIFVNSI-DLEKTYNRTFPICGGEVLTYKQLLKTIMDVTGR--------- 230
Query: 252 PVAKAVAMPREILLKKVP---------FPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
K + +P L K+ FP+ + L E N V DN F
Sbjct: 231 ---KRLLLPVPELFIKIGIGLFGNFNWFPITKDQFIMLKEGN-------VCDNDEIFNIT 280
Query: 303 GIVPHKLKGYPTEYL 317
G+ K Y YL
Sbjct: 281 GVKKEDFKEYLKRYL 295
>gi|389794271|ref|ZP_10197429.1| putative nucleoside-diphosphate sugar epimerase [Rhodanobacter
fulvus Jip2]
gi|388432796|gb|EIL89785.1| putative nucleoside-diphosphate sugar epimerase [Rhodanobacter
fulvus Jip2]
Length = 312
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 22/299 (7%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+GR++V +LA G +V+V R E + +G L + + D +
Sbjct: 7 VVLGGTGFVGRHLVPRLAADGHRVVVLSRNREQH----RELGVLPGVQVRSADAHDPAVL 62
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ +A A+ VINL+G +SFE V+ + E++ + +G + R Q+S L A
Sbjct: 63 QRELAGADAVINLVGILNPRGIHSFEHVHVELVEKVIEACRANG-VTRLHQMSALKAGQG 121
Query: 131 SPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
S ++ E V + L W T+ +P+ M G D L++++A +++ PL
Sbjct: 122 L-SNYLKSRGQMEARVRQSGLDW-TLYQPSVMFGEGDGLVSRFAGLLRQLPALPL-ARAK 178
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
+R+ P +V DVA A+ + + + +EL GPD+F++ E+ L+ D + +
Sbjct: 179 SRLAPTWVGDVATAIARCVDNPALGRQRCFELYGPDVFSLGEIVRLIRDASGRRTPILAL 238
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
P + + A E+L PG F+LD + +D++ + LGI P
Sbjct: 239 PDSLGRLQAQLAELL----------PGKPFSLDNFRSLRTDSVGKTDGYAM--LGITPQ 285
>gi|353237940|emb|CCA69901.1| related to putative nucleoside-diphosphate-sugar
epimerase-Coprinellus disseminatus [Piriformospora
indica DSM 11827]
Length = 282
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 15/249 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCEDDPRHLKLMGDL-GQIVPMKFNPRDDN 68
V GF+G YV + A G Q+++ R RH+ + D I + + +
Sbjct: 4 VICGAGFIGNYVARAFAASNPGIQIVLASR---QPKRHVDDLQDAHAHISSASADVTNAS 60
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
T++ A+ V++L+G + FE V A+ +A A+E G + + +S +GA+
Sbjct: 61 TLRPVFQDAHTVVSLVGI-LQGSPAKFEAVQWKGAQNVAQCAQEVGA--KLVHLSAIGAN 117
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S TK E+AVL P AT++RP+ + G D ++A + F P+ G G
Sbjct: 118 PDSELVSPRTKGLGEKAVLEAAPTATVIRPSLVFGPGDSFFTRFATLARFFPVMPVIGSG 177
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSM------GKIYELGGPDIFTVHELAELMYDTIRE 242
++ QPVYV D+A + + G + GKI E GGP++FT E+ +L++
Sbjct: 178 MSKFQPVYVGDLAKLIEVCSRSKGDASIAKKVDGKILEAGGPEVFTFREILQLVFKYSGR 237
Query: 243 YPHYVKVPF 251
+ V +P
Sbjct: 238 WRPMVPIPL 246
>gi|350545008|ref|ZP_08914525.1| NAD-dependent epimerase/dehydratase [Candidatus Burkholderia kirkii
UZHbot1]
gi|350527207|emb|CCD38681.1| NAD-dependent epimerase/dehydratase [Candidatus Burkholderia kirkii
UZHbot1]
Length = 318
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 138/289 (47%), Gaps = 24/289 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+G ++V L +G +V V R + HL L+ I ++ + D +
Sbjct: 7 ALIGGSGFIGSHLVNALVDLGKKVRVATRR-RVNAAHLTLL----PIDVIETDVHDPVQL 61
Query: 71 KATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
A + +++ V+NL+G R + F + + +IA A E G+ R + +S +G
Sbjct: 62 AAFIDQSDAVVNLVGVLQGRRGDPYGPDFAKAHVELPRKIAA-ACEAKGVRRLLHMSAIG 120
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
A PS +K E+ V+RE L W TI R + + G ED LLN++A + F PL
Sbjct: 121 ADPQGPSMYLRSKGDGEK-VIRESGLDW-TIFRSSVVFGPEDNLLNQFAFLERMFPVIPL 178
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
+ QPV+V DVA A+ L D S +YEL GP ++T+ EL TI ++
Sbjct: 179 -ACADAKFQPVFVGDVAKAMVNVLDLDDASR-HVYELAGPGVYTLAELVRFSGATIGKHS 236
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293
+K+P + AM E+ P L + D +++ + +I S
Sbjct: 237 RIIKLPESFGRLQAMTMEM--------APGVPLISRDNLDSMKTPSIAS 277
>gi|71661749|ref|XP_817891.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883110|gb|EAN96040.1| hypothetical protein, conserved [Trypanosoma cruzi]
gi|407862966|gb|EKG07801.1| hypothetical protein TCSYLVIO_001067 [Trypanosoma cruzi]
Length = 373
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 14/238 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGD--LGQIVPMK 61
G+ FG TG LG +V G ++PFR G R L++ GD +GQ
Sbjct: 29 GVNVVTFGATGILGMHVHHLCCYHGFTSILPFRFRAGLASGVRVLRMAGDGTVGQNFDTD 88
Query: 62 FNPRDDNTIKATMAKANVVINLIGR-------EYETRNYSFEDVNHFMAERIAGIAKEHG 114
+ + +K+ + K + VIN++G E +S E +N +A +E G
Sbjct: 89 YEIDKEFVVKSILEKVDNVINVVGAWQEPAVYENSQSWFSMEAINVEWPRMLARWCREMG 148
Query: 115 GIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
I+R +S +GA +SPS++ K AE AVL E P ATI+R + D +K+ +
Sbjct: 149 -ILRLTHMSMVGADLNSPSKLLRQKREAEIAVLEEFPTATIIRGTDIFSENDFSYSKYLK 207
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHEL 232
+ P+ G QPV+ D+A A +L D T G+I ELGGP FT ++L
Sbjct: 208 AERYLKIVPVPNRGQRIHQPVFAGDLAEAACRSLLLDHTE-GRIAELGGPVRFTTNDL 264
>gi|448474961|ref|ZP_21602726.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
gi|445816953|gb|EMA66835.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
Length = 298
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 121/258 (46%), Gaps = 31/258 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G + + L G V R D P + P + + D ++I
Sbjct: 5 VAGGTGFIGSNLCRALVDGGHDVTALSRSPGDTPE---------GVAPAEGDVTDYDSIA 55
Query: 72 ATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
A + V+NL+ E + N + ++ E + A E G RF+Q+S LGA
Sbjct: 56 AAAEGQDAVVNLVALSPLFEPKGGNVMHDRIHRGGTENLV-RAAEAAGADRFVQLSALGA 114
Query: 128 SSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN----- 180
+ K AE V+RE L W TI RP+ + G ++ F K+
Sbjct: 115 DPDGTTAYIRAKGQAE-TVVRESDLDW-TIFRPSVVFGDG----GEFVSFTKRLKGMFAP 168
Query: 181 ---FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
+PL G G TR QP++V D+ + AAL+DD +G+ YE+GGP++ T+ ++ +L+Y
Sbjct: 169 GVPLYPLPGGGKTRFQPIHVEDLVPMLVAALEDD-EHVGETYEVGGPEVLTLRQVTDLVY 227
Query: 238 DTIREYPHYVKVPFPVAK 255
R+ V +P P+A+
Sbjct: 228 AAERKGVTIVPLPMPLAR 245
>gi|386811440|ref|ZP_10098666.1| NAD-dependent epimerase/dehydratase [planctomycete KSU-1]
gi|386406164|dbj|GAB61547.1| NAD-dependent epimerase/dehydratase [planctomycete KSU-1]
Length = 299
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 147/308 (47%), Gaps = 21/308 (6%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFR-GCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKA 72
G+TGF+G+ ++ L QV R G E+ + K I + + D ++
Sbjct: 7 GSTGFVGKQLLHDLIDNDYQVRCLVRQGSENKITNYKDK----NIDIVYGDTTDARSLDD 62
Query: 73 TMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
T+ + VINL+G RE+ + +FE +++ + A+ G I RFI +S LGA
Sbjct: 63 TLKGCDAVINLVGIIREFPGKGVTFERLHYEGTANLVTAARTQG-IRRFIHMSALGARPQ 121
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
++ TK AEE V TI RP+ + G D+ +N +A +K F P+ G+G
Sbjct: 122 GKTQYQQTKFRAEEFVRDSGLDYTIFRPSIIFGPGDKFVNLFANMLKTQQFVPVVGNGKY 181
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
++QPV + +V++ ++ ++GK +E+GGP+ +L +++ + + P+ + +P
Sbjct: 182 KMQPVALENVSSGFVKSIGQK-NAIGKTFEIGGPEKMEFDKLIDIIGEVLCLPPYKIHIP 240
Query: 251 FPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
+ + +A + +P FP+ + L E N V D F+ GI P
Sbjct: 241 AFIMRCMAE----MFDWIPSFPITTEQITMLLEGN-------VCDERPFFEHFGIKPIGF 289
Query: 310 KGYPTEYL 317
K ++YL
Sbjct: 290 KEGISQYL 297
>gi|253702217|ref|YP_003023406.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M21]
gi|251777067|gb|ACT19648.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M21]
Length = 295
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 18/250 (7%)
Query: 14 GTTGFLGRYVVQQLAKMGSQV--LVPFRGCEDDPRHLK-LMGDLGQIVPMKFNPRDDNTI 70
G TGF+G +V Q L + G + LV +G + ++ + GD VP F + +
Sbjct: 7 GGTGFVGGHVRQALLESGHSIRLLVHRKGASEKLAGIEEIEGD--ATVPESFT----DAV 60
Query: 71 KATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
K + INLIG RE+ R +F+ ++ I A +HG + R +Q+S LG
Sbjct: 61 KG----CDATINLIGIIREFPGRGITFQRLHVEATRNIIAAATKHG-VSRHLQMSALGTR 115
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
++S +R F +K AEEAV TI RP+ + G +D +N+ A ++ P+ GDG
Sbjct: 116 ANSEARYFKSKFEAEEAVRASGLDYTIFRPSIIFGPKDDFINQLAGLLRSLPAMPVIGDG 175
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPHYV 247
++QP+ DVA AL+ ++G+ +EL GPD + +EL + + + + +
Sbjct: 176 EYQLQPISADDVARCFAEALEKP-EAIGETFELCGPDRLSYNELLDTIARVMGKGRVLKI 234
Query: 248 KVPFPVAKAV 257
K P P+ + V
Sbjct: 235 KNPLPLMRLV 244
>gi|159899223|ref|YP_001545470.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
gi|159892262|gb|ABX05342.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
Length = 308
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 18/280 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TG++G ++++L + V V R E + KL+ G + +K + D ++
Sbjct: 4 VTGGTGYVGSRLIEKLRQRPEPVRVLVRTPE---KAQKLVA--GNVSIVKGDVTDPESLI 58
Query: 72 ATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
A M + VI+L+ RE + SFE +N+ + AK G+ RF+ +S LG +
Sbjct: 59 AAMKGVSTVIHLVAIIRE-RSGGISFERMNYQATVNVVDAAKA-AGVKRFLHMSALGVVN 116
Query: 130 SSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKK------FNFF 182
TK A++ V L W T+ +P+ + G D +N A V++ F
Sbjct: 117 DPNLPYMDTKFRAQKYVEASGLDW-TVFQPSVIFGEGDEFINTLADLVRRPLMIAPAPFV 175
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
P+ GDG T+ QPV+ DV A L DD +++G+IY+LGGP+ T ++ +L+ + +
Sbjct: 176 PVVGDGKTKFQPVWRDDVIDAFIKVL-DDHSTIGQIYQLGGPEALTYEQMLDLIMQKLGK 234
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDE 282
+ VP P+ K + LL K P + + +LD
Sbjct: 235 KRSKIYVPVPLMKPAVFMMDKLLPKPPVTPAQLTMLSLDN 274
>gi|384085137|ref|ZP_09996312.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 347
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 121/253 (47%), Gaps = 35/253 (13%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TGF+GR++ ++L++ G Q+ + R E + +L + L Q+ ++ N D +
Sbjct: 7 CILGGTGFVGRHLAERLSQDGHQIRILTRNRERNRENLLV---LPQVEVVECNVHDPIAL 63
Query: 71 KATMAKANVVINLIGREYETR----NYSFE-----DVNHFMAERIAGIAKEHGGIMRFIQ 121
+ + +VVINL+G E R +Y E + NH R+ H GI R +
Sbjct: 64 EQQLEGRDVVINLVGILNENRPGRSDYPPERHGDFEKNHIELPRLVANLCGHLGIPRLLH 123
Query: 122 ISCLGASSSSPSRVFSTKAAAEEAVLR-----------------ELPWA-----TIMRPA 159
+S LGA+ +PS +K EE + + +L W T RP+
Sbjct: 124 MSALGANPIAPSAYLRSKGIGEEIIRQSGENSAKNGHFNYLNGPKLLWGRGLKVTSFRPS 183
Query: 160 AMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIY 219
+ G D N++AQ ++ FF ++QPV++ DV +A ++ DD + GK +
Sbjct: 184 IIFGEGDSFFNRFAQLLRNIPFFLPMAGTEAKMQPVWIEDVVSAFVQSI-DDEKTYGKAF 242
Query: 220 ELGGPDIFTVHEL 232
+L GP ++T+ EL
Sbjct: 243 DLCGPKVYTLGEL 255
>gi|448499172|ref|ZP_21611186.1| NAD-dependent epimerase/dehydratase [Halorubrum coriense DSM 10284]
gi|445697509|gb|ELZ49571.1| NAD-dependent epimerase/dehydratase [Halorubrum coriense DSM 10284]
Length = 298
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 39/262 (14%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-LMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G Y+ + LA G V R + P + + GD+ D +++
Sbjct: 5 VAGGTGFIGSYLCRALADDGHAVTALSRSPGETPDGVTGVSGDV----------TDYDSV 54
Query: 71 KATMAKANVVINLIGREYETRNYSFE-DVNHFMAERI--AGIAK-----EHGGIMRFIQI 122
+ + + V+NL+ + FE D + M +RI G A E GG+ F+Q+
Sbjct: 55 ASAVDGHDAVVNLV-----ALSPLFEPDGGNRMHDRIHRGGTANLVRAAEDGGVDGFVQL 109
Query: 123 SCLGASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN- 180
S LGA + + K AEE V +L W TI RP+ + G ++ F K+
Sbjct: 110 SALGADPNGDTAYIRAKGEAEEIVRDSDLDW-TIFRPSVVFGEG----GEFVSFTKRLKG 164
Query: 181 -------FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELA 233
+PL G G TR QP++V D+ + AA+ DD +G+ YE+GGP++ T+ ++
Sbjct: 165 MFAPGVPLYPLPGGGKTRFQPIHVEDLVPMIAAAVTDD-EHVGETYEIGGPEVLTLRQVT 223
Query: 234 ELMYDTIREYPHYVKVPFPVAK 255
+L+Y+ ++ V +P P+AK
Sbjct: 224 DLVYEAEQKGVTIVPLPMPLAK 245
>gi|197119922|ref|YP_002140349.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter bemidjiensis Bem]
gi|197089282|gb|ACH40553.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Geobacter bemidjiensis Bem]
Length = 295
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 125/249 (50%), Gaps = 16/249 (6%)
Query: 14 GTTGFLGRYVVQQLAKMGSQV--LVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
G TGF+G +V Q L + G + LV +G + KL G I ++ + +
Sbjct: 7 GGTGFVGGHVRQALLERGHSIRLLVHRKGASE-----KLAG----IEEIEGDATLPESFT 57
Query: 72 ATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
+ + INLIG RE+ R +F+ + H A R A ++ G+ R +Q+S LG +
Sbjct: 58 DAVKGCDATINLIGIIREFPGRGITFQRL-HVEATRNIIAAAKNNGVTRHLQMSALGTRA 116
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
+S +R F +K AEEAV TI RP+ + G +D +N+ A ++ P+ GDG
Sbjct: 117 NSEARYFKSKFEAEEAVRASGLDYTIFRPSIIFGPKDDFINQLAGLLRMLPAMPVIGDGE 176
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPHYVK 248
++QP+ DVA AL+ ++G+ +EL GPD + +EL + + + + +K
Sbjct: 177 YQLQPISADDVARCFAEALEKP-EAIGETFELCGPDRLSYNELLDTIARVMGKGRVLKIK 235
Query: 249 VPFPVAKAV 257
P P+ + V
Sbjct: 236 NPLPLMRLV 244
>gi|406892551|gb|EKD37866.1| hypothetical protein ACD_75C00963G0001 [uncultured bacterium]
Length = 402
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 125/249 (50%), Gaps = 16/249 (6%)
Query: 14 GTTGFLGRYVVQQLAKMGSQV--LVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
G TGF+G +V Q L + G + LV +G + KL G I ++ + +
Sbjct: 114 GGTGFVGGHVRQALLERGHSIRLLVHRKGASE-----KLAG----IEEIEGDATLPESFT 164
Query: 72 ATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
+ + INLIG RE+ R +F+ + H A R A ++ G+ R +Q+S LG +
Sbjct: 165 DAVKGCDATINLIGIIREFPGRGITFQRL-HVEATRNIIAAAKNNGVTRHLQMSALGTRA 223
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
+S +R F +K AEEAV TI RP+ + G +D +N+ A ++ P+ GDG
Sbjct: 224 NSEARYFKSKFEAEEAVRASGLDYTIFRPSIIFGPKDDFINQLAGLLRMLPAMPVIGDGE 283
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPHYVK 248
++QP+ DVA AL+ ++G+ +EL GPD + +EL + + + + +K
Sbjct: 284 YQLQPISADDVARCFAEALEKP-EAIGETFELCGPDRLSYNELLDTIARVMGKGRVLKIK 342
Query: 249 VPFPVAKAV 257
P P+ + V
Sbjct: 343 NPLPLMRLV 351
>gi|383784086|ref|YP_005468655.1| NAD-dependent epimerase/dehydratase [Leptospirillum ferrooxidans
C2-3]
gi|383082998|dbj|BAM06525.1| putative NAD-dependent epimerase/dehydratase [Leptospirillum
ferrooxidans C2-3]
Length = 297
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 11/241 (4%)
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+ MA + + +L G ETR ++E V H R A + G+ I +S +GAS S+
Sbjct: 61 SAMAGVDTIFHLTGILAETRTQTYEKV-HVQGTRSMLKAAKMAGVKTIIAVSAIGASHSA 119
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
SR TKA E+ +L +I+RP+ + G D+ +N +A + + PL G G
Sbjct: 120 QSRYHKTKAVMEDEILSSGLDVSIVRPSVVFGRRDKFINLFAGLARGLHILPLIGSGKNL 179
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
+ P++V D+ ++ + L D T I E+GGP I+T EL E + +++ + P
Sbjct: 180 VHPIWVGDLVTSL-SKLNTDRTIKPTILEIGGPRIYTYRELMETIKSSLKVNALIMSQPP 238
Query: 252 PVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKG 311
+ A +E L LP P + I SD + +N L L + P+ L+
Sbjct: 239 SMLAISAFFQEKL-------LPTP-FLTREMIRMALSDNVAKENHL-VTVLNVSPYPLEA 289
Query: 312 Y 312
Y
Sbjct: 290 Y 290
>gi|255019648|ref|ZP_05291727.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus caldus ATCC
51756]
gi|340783015|ref|YP_004749622.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus caldus SM-1]
gi|254970871|gb|EET28354.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus caldus ATCC
51756]
gi|340557166|gb|AEK58920.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus caldus SM-1]
Length = 346
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 138/319 (43%), Gaps = 46/319 (14%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+GR++ ++L K G V V R E L ++ L + F+P ++
Sbjct: 6 AILGGSGFVGRHLAEKLCKEGHSVRVLTRRRERHREDLLVLPGLELVEADVFDP---MSL 62
Query: 71 KATMAKANVVINLIGREYE----------TRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
+ + +VV+NL+G E R+ FE V H R+ G+ R +
Sbjct: 63 EGQLRDRDVVVNLVGILNEDRRGRQDLPPARHGDFERV-HIELPRLVANTCGRLGVRRLL 121
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLR-----------------ELPWA-----TIMRP 158
+S LGAS +PS +K EE V + +L W T RP
Sbjct: 122 HMSALGASPIAPSAYLRSKGLGEEIVRQAGEDSASLGHFTYLNGPKLLWGRGLKVTSFRP 181
Query: 159 AAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKI 218
+ + G D N++A +++ R+QPV+V DV +A AL DD + G+
Sbjct: 182 SVIFGEGDSFFNRFADLLRQVPLVIPLAKAQARMQPVWVEDVVSAFVRAL-DDERTYGQA 240
Query: 219 YELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLF 278
Y+L GP++FT+ EL I + V +P VA+ A +L+++P L
Sbjct: 241 YDLCGPEVFTLMELVRYTQSQIGTHRAIVGLPDFVAEIQAS----VLERLPGK-----LL 291
Query: 279 NLDEINAYTSDTIVSDNAL 297
D + + + D + N L
Sbjct: 292 TRDNLRSLSVDNVCRRNDL 310
>gi|307192450|gb|EFN75665.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial [Harpegnathos saltator]
Length = 274
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 14/167 (8%)
Query: 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-------SPSRV 135
+IGR++ET+N++F DV+ A ++A + KE + RFI +S L S+
Sbjct: 1 MIGRDWETKNFTFNDVHVEAARKLARLCKE-ANVERFIHVSSLNIDDKVEPILLKEGSQF 59
Query: 136 FSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFV----KKFNFFPLFGDGS-T 190
TK E+AV E P ATI+RP+ + G EDR LN + + +F P++ G T
Sbjct: 60 LKTKREGEQAVREEFPEATIVRPSTIWGQEDRFLNVYCEIYGLMRHQFRNIPIWEKGERT 119
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
QP+ V DVA +TA +KD T+ GK Y+ GP + + +L + +
Sbjct: 120 EKQPIAVYDVAGGITAIIKDPSTA-GKTYQFVGPKRYKLSDLLDWFH 165
>gi|58697442|ref|ZP_00372738.1| NADH2 dehydrogenase (ubiquinone) [Wolbachia endosymbiont of
Drosophila simulans]
gi|58536130|gb|EAL59744.1| NADH2 dehydrogenase (ubiquinone) [Wolbachia endosymbiont of
Drosophila simulans]
Length = 239
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 116/244 (47%), Gaps = 11/244 (4%)
Query: 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAE 143
+G YE++ F V+ ++ERIA AK M I S +G +S S+ +K E
Sbjct: 1 MGILYESKKQDFYAVHVKISERIAKSAKMKNVPM-MIHFSAMGIENSKLSKYAKSKLEGE 59
Query: 144 EAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAA 203
+AV A I+ P+ + G ED NK+A+ F PL G+G+T+ QP+ V D+A
Sbjct: 60 KAVTSPFQKAIIIMPSLVFGKEDNFFNKFARLPTILPFLPLIGNGTTKFQPICVTDLAEV 119
Query: 204 VTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPRE- 262
V + + KIY +GGP +++ L + + + + V FP+AK +A E
Sbjct: 120 VYRIISFNKQD-KKIYNMGGPKVYSFKSLLKFILNVTNRKCLLINVSFPMAKLIAFFLEN 178
Query: 263 ----ILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLI 318
+LLK P + D++ + +I + ++ + + + P ++ EYL
Sbjct: 179 KIISMLLK--PITGDTNPMLTQDQVKVMMNSSI--EKSVDLETMKVRPLAIENVVPEYLK 234
Query: 319 WYRK 322
YRK
Sbjct: 235 IYRK 238
>gi|401429430|ref|XP_003879197.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495447|emb|CBZ30751.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 369
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 120/263 (45%), Gaps = 17/263 (6%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGD--LGQIVPMK 61
G+ FG TG LG ++ G ++PFR G R ++ GD +GQ
Sbjct: 25 GVNVVTFGATGILGHHIHAVNCYHGYTSILPFRFRSGMPSSVRQMRSSGDGTVGQNFDTD 84
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNY-------SFEDVNHFMAERIAGIAKEHG 114
+ + +KA + K + VIN++G E Y S E +N +A +E G
Sbjct: 85 YEIDKEFVVKAILEKVDNVINVVGAWQEPACYENSQSWFSMEAINVEWPRMLARWCREMG 144
Query: 115 GIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
I++ +S +GA +SPS++ K AE AVL E P ATI+R + D +K+ +
Sbjct: 145 -ILKLTHMSMVGADLNSPSKLLRQKREAEIAVLEEFPTATIIRGTDIFAENDFSYSKYLK 203
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+ P+ G QPV+ D+A A +L D T G+I ELGGP FT ++L
Sbjct: 204 AQRYMKIVPVPNHGQRIHQPVFAGDLAEAAARSLLLDHTE-GRIAELGGPVRFTTNDLLR 262
Query: 235 LMYDTIREYP---HYVKVPFPVA 254
+ + H K+ F +A
Sbjct: 263 WCSECNNQRHLTVHLPKIVFDIA 285
>gi|347529310|ref|YP_004836058.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
sp. SYK-6]
gi|345137992|dbj|BAK67601.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Sphingobium
sp. SYK-6]
Length = 320
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 139/309 (44%), Gaps = 28/309 (9%)
Query: 25 QQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81
Q+L G +V R + PR ++ +G++GQ + + + A +A A +
Sbjct: 23 QELLSKGYRV----RIAQRMPRQAMAVRSLGNMGQTQLLAVDITKPGQVAAALAGAGAAV 78
Query: 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAA 141
NL+G + H + R A G+ + +S +GA +S S TK
Sbjct: 79 NLVGLLKGDMVSA-----HVVGARNIAEAAAAQGLDALVHVSAIGADPASSSAYGKTKGE 133
Query: 142 AEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG-----DGSTRIQPVY 196
E AV P ATI+RP+ M G +D N++AQ + + PL G TR QPV
Sbjct: 134 GEAAVRAAFPGATIVRPSIMFGQDDGFTNRFAQLIATGSSVPLVRAVPLIRGETRFQPVN 193
Query: 197 VVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKA 256
V DVA A+ A++ T G+ +ELGGPD+ T+ ++ + D I ++ VP +A A
Sbjct: 194 VADVARAIAQAVESPETFGGQTFELGGPDVMTLAQINHWIADQIGRKVRFLPVPDGLASA 253
Query: 257 VAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTE 315
+A + P P+ R D+ D +V+ +A F+ GI P +
Sbjct: 254 LAA----MTGWAPGAPITR------DQFRMLLHDNVVAADAPGFEQFGIKPAPMAALAPA 303
Query: 316 YLIWYRKGG 324
+L YR+ G
Sbjct: 304 WLTHYRRQG 312
>gi|289582284|ref|YP_003480750.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|448282298|ref|ZP_21473585.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|289531837|gb|ADD06188.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|445576358|gb|ELY30813.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
Length = 309
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRG-CEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G ++ +L + G +V R +D L DL + D +TI
Sbjct: 5 VAGGTGFIGSHLCTELVERGHEVTSLSRNPTSEDAADLPDEVDLA-----SGDVSDYDTI 59
Query: 71 KATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
T+A + V+N + Y+ + + + H A E G + RF+QIS LGA
Sbjct: 60 VDTVADHDAVVNFVSLSPLYQPPSGTDHETVHLGGTENLVRAAEEGEVERFLQISALGAD 119
Query: 129 SSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
P+ K AEE ++RE L W TI+RP+ + G L Q + L G
Sbjct: 120 PDGPTPYIRAKGRAEE-IVREAALGW-TIVRPSIVFGDGAEFLEFTKQLTTPY-LTGLPG 176
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G TR QP++V D A + L+DD T +G+ YE+GGP I T+ + EL+Y+
Sbjct: 177 GGETRFQPIWVGDFAPMLADVLEDD-THVGQTYEIGGPQIVTLADATELVYEAEGRSVAI 235
Query: 247 VKVPFPVAK---AVAMPREILLKKVPF 270
+ +P + K AVA P L +PF
Sbjct: 236 LPIPMALTKLGLAVADP----LPLIPF 258
>gi|377822007|ref|YP_004978378.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. YI23]
gi|357936842|gb|AET90401.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. YI23]
Length = 318
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 16/259 (6%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+G ++V L +G V + R + HL L+ + ++ + D +
Sbjct: 7 ALIGGSGFIGSHLVNALVDLGKNVRIATRR-RVNAAHLTLL----PVDVIETDVHDPVKL 61
Query: 71 KATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
A + +++ VINL+G R + F + + +IA A E G+ R + +S +G
Sbjct: 62 AAFIDQSDAVINLVGVLQGRRDDPYGPEFAKAHVELPHKIAA-ACEAKGVRRLLHMSAIG 120
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
A PS +K E+ ++RE L W TI R + + G ED LLN++A + F PL
Sbjct: 121 ADPQGPSMYLRSKGDGEK-IVRESGLDW-TIFRSSVVFGPEDNLLNQFAFLERVFPVIPL 178
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
QPV+V DVA A+ L D + ++YEL GP ++T+ EL TI ++
Sbjct: 179 -ACADAEFQPVFVGDVAKAMVNVLDLDAANR-QVYELAGPSVYTLAELVRFAGATIGKHS 236
Query: 245 HYVKVPFPVAKAVAMPREI 263
+K+P + + AM E+
Sbjct: 237 RIIKLPESLGRLQAMTMEM 255
>gi|409038722|gb|EKM48609.1| hypothetical protein PHACADRAFT_266259, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 219
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 17/188 (9%)
Query: 120 IQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKF 179
I IS +GA+ +SP TKA E+A+L P ATI+RP+ + G D ++AQ K
Sbjct: 14 IHISAIGANCNSPVPYARTKALGEDAILDACPDATIIRPSILFGKGDGFFTRFAQLAKIL 73
Query: 180 NFFPLFGDGSTRIQPVYVVDVAAAVTA----ALKDDGTSMGKIYELGGPDIFTVHELAEL 235
P+FG G+ R QPV+V DVA A+ ++ + GK E GGP++FT E+ EL
Sbjct: 74 PVMPVFGGGTARFQPVFVDDVARAIEILSRREIETNEACDGKTIEAGGPEVFTYREIIEL 133
Query: 236 MYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD--EINAYTSDTIVS 293
+ + + VP+ AV + ++ +K+P P L + ++ D IV
Sbjct: 134 VLKHTNKKRPIISVPY----AVGTLQGLVFEKLP-----PNLLTITRAQVQQLKEDNIV- 183
Query: 294 DNALTFQD 301
N T+QD
Sbjct: 184 -NPATYQD 190
>gi|383620553|ref|ZP_09946959.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
gi|448697911|ref|ZP_21698789.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
gi|445781277|gb|EMA32138.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
Length = 306
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 141/298 (47%), Gaps = 39/298 (13%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKL-MGDLGQIVPMKFNPRDDN 68
V G TGF+GR + +L G V R +D P +++ MGD+ +
Sbjct: 5 VAGGTGFIGRNLCTELHDRGHDVTALSRSPDDRGLPDGVEVAMGDVSAA----------D 54
Query: 69 TIKATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ +A + V+NL+ ++ R E V+ E + +A E G+ RF+Q+S LG
Sbjct: 55 SIRDAVAGHDAVVNLVALSPLFQPRGTDHETVHLRGTENLVDLA-ETEGVDRFVQLSALG 113
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---F 181
A + K AE V+RE L W TI RP+ + G ++ +F K+
Sbjct: 114 ADPQGDTDYIRAKGKAE-GVVRESDLEW-TIFRPSVVFGDG----GEFVEFTKELTTPYV 167
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
L G G TR QP++V D+ + AL+D+ T +G+ YE+ GP++ T+ E+ EL Y+
Sbjct: 168 TGLPGGGKTRFQPIWVGDLVPMLADALEDE-THVGETYEVAGPEVLTLAEVTELAYEAEG 226
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFP-LPRPGLFNLDEINAYTSDTIVSDNALT 298
+ + +P P+AK L P P +P F D+ + D V+ N +T
Sbjct: 227 KSVTVLPIPMPLAKLG------LTAADPLPFVP----FGPDQARSLEMDNTVTGNDMT 274
>gi|154344721|ref|XP_001568302.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065639|emb|CAM43410.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 369
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 119/263 (45%), Gaps = 17/263 (6%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGD--LGQIVPMK 61
G+ FG TG LG ++ G ++PFR G R ++ GD +GQ
Sbjct: 25 GVNVATFGATGILGHHIHAVNCYHGYTSILPFRFRAGMPSSVRQMRSSGDGTVGQNFDTD 84
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNY-------SFEDVNHFMAERIAGIAKEHG 114
+ + +KA + K + VIN++G E Y S E +N +A +E G
Sbjct: 85 YEIDKEFVVKAILEKVDNVINVVGAWQEPACYENSQSWFSMEAINVEWPRMLARWCREMG 144
Query: 115 GIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
I++ +S +GA SPS++ K AE AVL E P ATI+R + D +K+ +
Sbjct: 145 -ILKLTHMSMVGADLDSPSKLLRQKREAEIAVLEEFPTATIIRGTDIFAENDFSYSKYLK 203
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+ P+ G QPV+ D+A A +L D T G+I ELGGP FT ++L
Sbjct: 204 AQRYMKIVPVPNHGQRIHQPVFAGDLAEAAARSLLLDHTE-GRIAELGGPVRFTTNDLLR 262
Query: 235 LMYDTIREYP---HYVKVPFPVA 254
+ + H K+ F +A
Sbjct: 263 WCSECNNQRHLTVHLPKIVFDIA 285
>gi|340382827|ref|XP_003389919.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
subunit 9, mitochondrial-like [Amphimedon queenslandica]
Length = 334
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 145/312 (46%), Gaps = 25/312 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ G +GF+GR++V LA+ G S+VL R + RHL ++ + + + NP
Sbjct: 22 AILGGSGFVGRHLVAALAERGIASRVLTRRR---NRTRHLLVVPNCEVV---EANPLRLA 75
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ +A + VINL+G ++R+ F DV+ + IA + G+ R + IS LG +
Sbjct: 76 DLRGHLAGCDAVINLVGILNQSRSARFADVHAGLPASIAAACRS-AGVGRIVHISALGVA 134
Query: 129 SSSPSRVFSTKAAAEEAVLRELP--WATIMRPAAMIGTEDRLLNKWAQFVKKFNF-FPLF 185
+PS +K E A+ T +RP+ + G D N++A + FPL
Sbjct: 135 EDAPSEYLRSKFKGETAIHAAGGDIAVTSLRPSIIFGPGDSFFNRFAILLSLSPLVFPL- 193
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
R PV+V DV A+ L DD T + YEL GP + ++HEL +
Sbjct: 194 ACADARFAPVWVEDVVKAILRILDDDST-FDRRYELCGPQVRSLHELVQFTARITGRRRW 252
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ + +++ + I+++ +P LF LD + T ++ +D+ F LGI
Sbjct: 253 IIDIGHRLSRL----QGIVMQNLPGK-----LFTLDNYLSATVPSVCTDSG--FDALGIE 301
Query: 306 PHKLKGYPTEYL 317
P ++ YL
Sbjct: 302 PVGIESIVPAYL 313
>gi|389594743|ref|XP_003722594.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|323363822|emb|CBZ12828.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 369
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 14/256 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGD--LGQIVPMK 61
G+ FG TG LG ++ G ++PFR G R ++ GD +GQ
Sbjct: 25 GVNVATFGATGILGHHIHAVNCYHGYTSILPFRFRSGMPSSVRQMRSSGDGTVGQNFDTD 84
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNY-------SFEDVNHFMAERIAGIAKEHG 114
+ + +KA + K + V+N++G E Y S E +N +A +E G
Sbjct: 85 YEVDKEFVVKAILEKVDNVVNVVGAWQEPACYENSQSWFSMEAINVEWPRMLARWCREMG 144
Query: 115 GIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
I++ +S +GA +SPS++ K AE AVL E P ATI+R + D +K+ +
Sbjct: 145 -ILKLTHMSMVGADLNSPSKLLRQKREAEIAVLEEFPTATIIRGTDIFAENDFSYSKYLK 203
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+ P+ G QPV+ D+A A +L D T G+I ELGGP FT ++L
Sbjct: 204 AQRYLKIVPVPNRGQRIHQPVFAGDLAEAAARSLLLDHTE-GRIAELGGPMRFTTNDLLR 262
Query: 235 LMYDTIREYPHYVKVP 250
+ + V +P
Sbjct: 263 WCSECNNQRHLTVHLP 278
>gi|300313569|ref|YP_003777661.1| NADH-ubiquinone oxidoreductase [Herbaspirillum seropedicae SmR1]
gi|300076354|gb|ADJ65753.1| NADH-ubiquinone oxidoreductase protein [Herbaspirillum seropedicae
SmR1]
Length = 322
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 114/233 (48%), Gaps = 16/233 (6%)
Query: 12 VFGTTGFLGRYVVQQL-AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G +V+ L + +V+VP R E +HL L+ + +V + N DD +
Sbjct: 8 VIGGSGFIGTRLVELLGSSTDYRVMVPTRRYERA-KHL-LVSPVVTVV--QANIHDDAAL 63
Query: 71 KATMAKANVVINLIG-------REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
+A+A+VVINL+G R FE + + RI + G + R++ +S
Sbjct: 64 ARLVAEADVVINLVGILQSRPARGGAAYGPDFERQHVLLPRRIVAACVQQG-VKRYLHMS 122
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPW-ATIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
L A + PS +KAA E+ L I RP+ + G D LN +A + F
Sbjct: 123 ALCADAKGPSMYLRSKAAGEQEALSAPSLDVAIFRPSVVFGEGDNFLNMFAGLNRMFPVI 182
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
PL G R QPVYV DVA A AL GK++ELGGP +T+ EL L
Sbjct: 183 PL-GSPDARFQPVYVGDVAQAFVNALALPRLG-GKVFELGGPKQYTLRELVRL 233
>gi|119896786|ref|YP_931999.1| putative NADH dehydrogenase [Azoarcus sp. BH72]
gi|119669199|emb|CAL93112.1| putative NADH dehydrogenase [Azoarcus sp. BH72]
Length = 322
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 27/313 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G +GF+G + +L+ + +P R L L QI ++ + D T+
Sbjct: 8 LIGGSGFVGSVIANRLSAAAIDLCIPTRRPARAAHLLPL--PTAQI--LEADVHDPVTLA 63
Query: 72 ATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ A+ V+NL+G R F + + ++ + G+ + I IS LGA
Sbjct: 64 RLLEGADAVVNLVGILHSRPGSPYGRDFARAHVELPRKLVSACRS-AGVRQLIHISALGA 122
Query: 128 SSSSPSRVFSTKAAAE---EAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+ PS +KAA E A ++ W T++RP+ + G DR LN +A + PL
Sbjct: 123 NPDGPSEYQRSKAAGEAEIHAAGDDVMW-TVLRPSVIFGRADRFLNLFADLARTLPVLPL 181
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G TR QPVYV DVA V L D + + +E+ GP ++T+ EL E + + +P
Sbjct: 182 AG-ARTRFQPVYVEDVAEVVWRCLGDPACAR-ETFEVAGPTVYTLRELVEYV-SALAGHP 238
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
V + + VAM + L+ +P PL P D I + D + S L F G+
Sbjct: 239 RPV---IALPEGVAMLQARLMSLLPQPLISP-----DNIRSMRVDNVASGAPLPF---GL 287
Query: 305 VPHKLKGYPTEYL 317
P ++ E++
Sbjct: 288 RPTAVEEAAPEWI 300
>gi|146101072|ref|XP_001469019.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398023241|ref|XP_003864782.1| hypothetical protein, conserved [Leishmania donovani]
gi|134073388|emb|CAM72116.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322503018|emb|CBZ38102.1| hypothetical protein, conserved [Leishmania donovani]
Length = 369
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 17/263 (6%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGD--LGQIVPMK 61
G+ FG TG LG ++ G ++PFR G R ++ GD +GQ
Sbjct: 25 GVNVATFGATGILGHHIHAVNCYHGYTSILPFRFRSGMPSSVRQMRSSGDGTVGQNFDTD 84
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNY-------SFEDVNHFMAERIAGIAKEHG 114
+ + +KA + K + V+N++G E Y S E +N +A +E G
Sbjct: 85 YEIDKEFVVKAILEKVDNVVNVVGAWQEPACYENSQSWFSMEAINVEWPRMLARWCREMG 144
Query: 115 GIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ 174
I++ +S +GA +SPS++ K AE AVL E P ATI+R + D +K+ +
Sbjct: 145 -ILKLTHMSMVGADLNSPSKLLRQKREAEIAVLEEFPTATIIRGTDIFAENDFSYSKYLK 203
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+ P+ G QPV+ D+A A +L D T G+I ELGGP FT ++L
Sbjct: 204 AQRYMKIVPVPNRGQRIHQPVFAGDLAEAAARSLLLDHTE-GRIAELGGPVRFTTNDLLR 262
Query: 235 LMYDTIREYP---HYVKVPFPVA 254
+ + H K+ F +A
Sbjct: 263 WCSECNNQRHLTVHLPKIVFDIA 285
>gi|388566586|ref|ZP_10153030.1| NAD-dependent epimerase/dehydratase [Hydrogenophaga sp. PBC]
gi|388266239|gb|EIK91785.1| NAD-dependent epimerase/dehydratase [Hydrogenophaga sp. PBC]
Length = 317
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 113/228 (49%), Gaps = 12/228 (5%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR+V ++L + G + VP R L L ++ ++ + D +
Sbjct: 6 VLGGTGFVGRHVCEKLQRRGWHITVPTRQIAKANAVLPL----PRVTVVQADVHDPRQLL 61
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
M + V+NL+ + +FE V+ + IA R + +S LGAS+ +
Sbjct: 62 RLMEGQDAVVNLVAILHGNEE-AFERVHVELPLSIAEACLADAAC-RLVHVSALGASADA 119
Query: 132 PSRVFSTKAAAEEAVLRELPWA-TIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
PS +KA EE VLR + T++RP+ + G D LN +A+ + PL G
Sbjct: 120 PSMYQRSKARGEE-VLRATGLSLTLLRPSVIFGRGDHFLNLFARLQRFSPVMPLAG-ADA 177
Query: 191 RIQPVYVVDVAAAVTAALKDDG---TSMGKIYELGGPDIFTVHELAEL 235
R+QPV+V DVA A+ L DD S+G+ E GP++ ++ EL +L
Sbjct: 178 RLQPVWVEDVAEAIAVCLGDDALGRASIGRTIECAGPEVLSLRELVQL 225
>gi|448355260|ref|ZP_21544013.1| NAD-dependent epimerase/dehydratase [Natrialba hulunbeirensis JCM
10989]
gi|445636025|gb|ELY89190.1| NAD-dependent epimerase/dehydratase [Natrialba hulunbeirensis JCM
10989]
Length = 309
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 138/306 (45%), Gaps = 31/306 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRG-CEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G + +LA+ G +V R +D L DL + D +TI
Sbjct: 5 VAGGTGFIGSHCCTELAERGHEVTSLSRNPTSEDAATLPDEVDLA-----SGDVSDYDTI 59
Query: 71 KATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
T+A + V+N + Y+ + + + H A E G + RF+QIS LGA
Sbjct: 60 VDTVASHDAVVNFVSLSPLYQPPSGTDHETVHLGGTENLVRAAEDGDVERFLQISALGAD 119
Query: 129 SSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
P+ K AEE ++RE L W TI+RP+ + G L Q + L G
Sbjct: 120 PDGPTPYIRAKGRAEE-IVREAALGW-TIVRPSIVFGDGAEFLEFTKQLTTPY-LTGLPG 176
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G TR QP++V D A + L+DD T +G+ YE+GG I T+ + EL+Y+
Sbjct: 177 GGETRFQPIWVGDFAPMLADVLEDD-THVGQTYEIGGSQIVTLADATELVYEAEGRSVTI 235
Query: 247 VKVPFPVAK---AVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
+ +P + K AVA P L +P F ++ + D V++N +T G
Sbjct: 236 LPIPMALTKLGLAVADP----LPLIP--------FGTEQGESLEFDNTVAENDVTA--FG 281
Query: 304 IVPHKL 309
+ P L
Sbjct: 282 VEPDDL 287
>gi|410694701|ref|YP_003625323.1| putative NADH UBIQUINONE OXIDOREDUCTASE 1 ALPHA SUBUNIT [Thiomonas
sp. 3As]
gi|294341126|emb|CAZ89527.1| putative NADH UBIQUINONE OXIDOREDUCTASE 1 ALPHA SUBUNIT [Thiomonas
sp. 3As]
Length = 330
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 138/304 (45%), Gaps = 19/304 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G +GF+G +V L+ V VP R RHL L + ++ + DD +
Sbjct: 8 VIGGSGFIGSRLVNALSLANHFVTVPTR-RRQRARHLV---QLPLVDVVEIDVHDDAKLA 63
Query: 72 ATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+A + V+NL+G R + F + + RIA + G + R + +S LGA
Sbjct: 64 KLVAGRDAVVNLVGILQGRRGQPYGADFARAHVDLPRRIAAACAQQG-VRRVVHMSALGA 122
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPW-ATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
S PS +K E A+ + TI RP+ + G ED LN +A+ + F PL G
Sbjct: 123 DSKGPSMYLRSKGDGEAALKAQAGIDLTIFRPSVVFGPEDNFLNTFAKLQRVFPVVPLAG 182
Query: 187 DGSTRIQPVYVVDVAAAVTAAL--KDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
TR PVYV DV A ++L ++G+ YEL GP +T+ EL L R
Sbjct: 183 -AKTRFAPVYVGDVVTAFASSLVGPQARETLGQTYELCGPGTYTLAELVRLSGQWARVGG 241
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ-DLG 303
+ P+ A+ + ++++ P P + + D +++ D++ S F +LG
Sbjct: 242 GRGRSIIPLPDALGRLQALMMELAPG---EP-VMSRDNLDSMKVDSVCSGAMPGFAPELG 297
Query: 304 IVPH 307
VPH
Sbjct: 298 -VPH 300
>gi|336253299|ref|YP_004596406.1| NAD-dependent epimerase/dehydratase [Halopiger xanaduensis SH-6]
gi|335337288|gb|AEH36527.1| NAD-dependent epimerase/dehydratase [Halopiger xanaduensis SH-6]
Length = 297
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 141/294 (47%), Gaps = 30/294 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKL-MGDLGQIVPMKFNPRDDN 68
V G TGF+G + +LA+ G +V R + + P + L MGD+ +
Sbjct: 5 VAGGTGFIGTNLCTELAERGHEVTALSRNPDRNGLPDDVDLEMGDVSAY----------D 54
Query: 69 TIKATMAKANVVINLIGRE--YETRNYSFEDVNHFMA-ERIAGIAKEHGGIMRFIQISCL 125
+I+ +A + V+NL+ Y+ + ++ H E + A++HG + R++QIS L
Sbjct: 55 SIEGAVAGHDAVVNLVALSPLYQASDPGAQERVHLGGTENLVRAAEDHG-VDRYLQISAL 113
Query: 126 GASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
GA S K AE+ V +L W TI+RP+ + G ++ Q + L
Sbjct: 114 GADPDSDIDHIRAKGKAEKVVTDSDLEW-TIVRPSIVFGDGGEFVDFTKQLTTPY-VTGL 171
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G TR QP++V D+ + A++DD + G+IYELGGP + T+ + EL+Y E
Sbjct: 172 PGGGETRFQPIWVGDLVPMLADAIEDDAHA-GEIYELGGPQVVTLADATELVY--AAEGK 228
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
VP P+ A+ + VPF +P F D+ + D V+DN +T
Sbjct: 229 DVTIVPVPM--ALTKLGLAAVDAVPF-VP----FGADQARSLELDNTVADNDVT 275
>gi|322418063|ref|YP_004197286.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18]
gi|320124450|gb|ADW12010.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18]
Length = 294
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 14 GTTGFLGRYVVQQLAKMGSQV--LVPFRGCEDDPRHLKLMGDLGQIVP----MKFNPRDD 67
G TGF+G +V + L G + LV RG LG + P ++ +
Sbjct: 7 GGTGFVGGHVREALLARGHSIRLLVHRRG-------------LGTVTPDVEEIEGDATKP 53
Query: 68 NTIKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGI--AKEHGGIMRFIQIS 123
T + + + INL+G RE+ R +F+ H E I A + R +Q+S
Sbjct: 54 ETFEEALRGCDAAINLVGIIREFPGRGITFQ---HLHVEATGNILAAARKAQVRRHLQMS 110
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
LG S S + F +K AEE V + TI RP+ + G +D +NK A +++ F P
Sbjct: 111 ALGTRSDSTAHYFKSKYQAEEQVRKSGLDYTIFRPSIIFGPKDDFINKLAGYMRTFPAMP 170
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+ GDG ++QP+ DVA AL+ T + YEL GPD ++ +EL +L+
Sbjct: 171 VIGDGEYQLQPISADDVARCFADALEKPET-IRHEYELCGPDRYSYNELLDLV 222
>gi|389688632|ref|ZP_10178299.1| NAD dependent epimerase/dehydratase family protein [Microvirga sp.
WSM3557]
gi|389690360|ref|ZP_10179377.1| NAD dependent epimerase/dehydratase family protein [Microvirga sp.
WSM3557]
gi|388589878|gb|EIM30166.1| NAD dependent epimerase/dehydratase family protein [Microvirga sp.
WSM3557]
gi|388590591|gb|EIM30874.1| NAD dependent epimerase/dehydratase family protein [Microvirga sp.
WSM3557]
Length = 259
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 16/197 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFR---GCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
TVFG +GFLGR++V+ LA+ G+ V + R + PR L +I + + DD
Sbjct: 5 TVFGGSGFLGRHLVEHLARTGASVRIAARHPLTTAEPPR-------LARIQYVAADILDD 57
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
++A + +A+ VINL+G + R +F + A R+A A + + + +S LGA
Sbjct: 58 AAVQAAIQEADTVINLVGILSQVRRQTFTALYEEGARRVAATAGRLR-VRQLVHVSALGA 116
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
S ++P+ +KAA E AV ATI+RP+ + G +D N +A PL G
Sbjct: 117 SRTAPALADRSKAAGEAAVRAAFLGATIIRPSLVYGPDDHFFNGFAALA-----LPLIGS 171
Query: 188 GSTRIQPVYVVDVAAAV 204
G TR QPVYV D+ A V
Sbjct: 172 GRTRFQPVYVEDLVAGV 188
>gi|189423451|ref|YP_001950628.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
gi|189419710|gb|ACD94108.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
Length = 294
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 19/252 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+G ++ +L K G ++++ H + + +K + D
Sbjct: 5 IAGGTGFVGGHLTAELLKRGHELVLL--------SHARSGSTAAGVTFVKGDVVDPAVYG 56
Query: 72 ATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGI--AKEHGGIMRFIQISCLGA 127
A M + INL+G RE+ + +FE ++ E AG+ A +H G++R++Q+S LG
Sbjct: 57 AAMKGCDAAINLVGIIREFPAKGVTFERLH---VEATAGMVQATQHAGVLRYLQMSALGT 113
Query: 128 SSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
+ S TK EE V L W TI RP+ + G D +N A ++ P G
Sbjct: 114 RLDAVSGYHRTKWRGEEIVRGSGLAW-TIFRPSLIFGPRDAFVNMLADNLRLAPVMPTMG 172
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPH 245
DG+ R+QP++ DVA AL+ T+ G+ +EL G D T EL + + + + + +P
Sbjct: 173 DGTYRLQPIHGSDVARCYADALEKPETA-GQTFELCGEDRLTYRELLDAIAEAMGKGHPW 231
Query: 246 YVKVPFPVAKAV 257
+P + K V
Sbjct: 232 KPSLPLSLMKPV 243
>gi|289209614|ref|YP_003461680.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sp. K90mix]
gi|288945245|gb|ADC72944.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sp. K90mix]
Length = 320
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 143/311 (45%), Gaps = 25/311 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TGF+G ++++L G +V V R RH L+ + ++ ++ + D T+
Sbjct: 10 CLLGGTGFVGHQIIRRLIDRGIRVRVLSRRPH---RHRDLLVN-PEVDLIEGSAHDPATL 65
Query: 71 KATMAKANVVINLIGREYET-RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS- 128
+ A + VINL+G E R+ S H + A A E G+ RF+Q+S L A
Sbjct: 66 ERAFAGQDAVINLVGILNERGRDGSGFRAAHVELTQKALAAAESCGVRRFLQMSALKADM 125
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWA-TIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ PS TK AE+ V +A T+ RP+ + G +D LLN++A +K F PL
Sbjct: 126 ENPPSHYLRTKGEAEQLVFACDAFAVTVFRPSVIFGRDDSLLNRFATLLKISPFMPL-AR 184
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
+ PVYV DVA +L+ T G+ YEL GP +T+ EL + I +
Sbjct: 185 ADAKFAPVYVGDVAEHFVDSLEAPET-FGEGYELCGPKAYTLEELVRYVGRLIGRRRPVI 243
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS-DNALTFQDLGIVP 306
K+P K A E + K PL R D + T D+I DN L P
Sbjct: 244 KLPDWAGKLQASVFEFVPGK---PLSR------DNFASLTIDSICEGDNRLP------CP 288
Query: 307 HKLKGYPTEYL 317
+L+ EYL
Sbjct: 289 TRLESIAPEYL 299
>gi|296136950|ref|YP_003644192.1| NAD-dependent epimerase/dehydratase [Thiomonas intermedia K12]
gi|295797072|gb|ADG31862.1| NAD-dependent epimerase/dehydratase [Thiomonas intermedia K12]
Length = 330
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 139/304 (45%), Gaps = 19/304 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G +GF+G +V L+ V VP R RHL L + ++ + DD +
Sbjct: 8 VIGGSGFIGSRLVNALSLANHFVTVPTR-RRQRARHLV---QLPLVDVVETDVHDDAKLA 63
Query: 72 ATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+A + V+NL+G R + F + + RIA + G + R + +S LGA
Sbjct: 64 KLVAGRDAVVNLVGILQGRRGQPYGADFARAHVDLPRRIAAACAQQG-VRRVVHMSALGA 122
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPW-ATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
S+ PS +K E A+ + TI RP+ + G ED LN +A+ + F PL G
Sbjct: 123 DSNGPSMYLRSKGDGEAALKAQAGIDLTIFRPSVVFGPEDNFLNTFAKLQRVFPVVPLAG 182
Query: 187 DGSTRIQPVYVVDVAAAVTAAL--KDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
TR PVYV DV A ++L ++G+ YEL GP +T+ EL L R
Sbjct: 183 -AKTRFAPVYVGDVVTAFASSLVGPQARETLGQTYELCGPGTYTLAELVRLSGQWARVGG 241
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ-DLG 303
+ P+ A+ + ++++ P P + + D +++ D++ S F +LG
Sbjct: 242 GRGRSIIPLPDALGRLQALMMELAPG---EP-VMSRDNLDSMKVDSVCSGALPGFAPELG 297
Query: 304 IVPH 307
VPH
Sbjct: 298 -VPH 300
>gi|409408069|ref|ZP_11256513.1| NADH-ubiquinone oxidoreductase [Herbaspirillum sp. GW103]
gi|386432525|gb|EIJ45352.1| NADH-ubiquinone oxidoreductase [Herbaspirillum sp. GW103]
Length = 322
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 113/233 (48%), Gaps = 16/233 (6%)
Query: 12 VFGTTGFLGRYVVQQL-AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+G +++ L + G +V+VP R E K + + ++ + DD +
Sbjct: 8 VIGGSGFIGTRLIELLGSTTGYRVMVPTRRYE----RAKHLLVSPVVSVVQADIHDDAVL 63
Query: 71 KATMAKANVVINLIG-------REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
+A+A+VVINL+G R + FE + + RI + G + R++ +S
Sbjct: 64 ARLVAEADVVINLVGILQSRPARGGASYGPDFERQHVVLPRRIVAACAQQG-VARYLHMS 122
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPW-ATIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
L A + +PS +KAA E+ L I RP+ + G D +N +A + F
Sbjct: 123 ALCADAQAPSMYLRSKAAGEQEALASPALDVAIFRPSVVFGEGDNFINMFAGLNRMFPVI 182
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
PL G R QPVYV DVA A AL GK++ELGGP +T+ EL L
Sbjct: 183 PL-GSPDARFQPVYVGDVAQAFVNALALPRLG-GKVFELGGPKQYTLRELVRL 233
>gi|448397522|ref|ZP_21569555.1| NAD-dependent epimerase/dehydratase [Haloterrigena limicola JCM
13563]
gi|445672621|gb|ELZ25192.1| NAD-dependent epimerase/dehydratase [Haloterrigena limicola JCM
13563]
Length = 306
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 136/295 (46%), Gaps = 32/295 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G + +LA+ G +V R + D + +G + ++I
Sbjct: 5 VAGGTGFIGTNLCAELAERGHEVTALSRSPDRDGLPDGVETAIGDV-------SASDSIA 57
Query: 72 ATMAKANVVINLIGRE--YET-RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
T+A + V+NL+ +E R S E+V+ E + A E G + RF+Q+S LGA
Sbjct: 58 TTVADHDAVVNLVSLSPLFEPPRGTSHEEVHLGGTENLV-RAAEDGDVDRFLQLSALGAD 116
Query: 129 SSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFPL 184
+ + TK AE V L W TI+RP+ + G ++ F K L
Sbjct: 117 PNGDTAYIRTKGQAERVVRDSSLAW-TIVRPSVVFGDG----GEFVDFTKTLTTPYVTGL 171
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G TR QP++V D+ + AL+DD T + + YE+GGP + T+ ++ EL Y+ E
Sbjct: 172 PGGGKTRFQPIWVGDLVPILADALEDD-THVSETYEIGGPQVLTLADVTELAYEA--EGK 228
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFP-LPRPGLFNLDEINAYTSDTIVSDNALT 298
VP P+ A R L P P +P F D+ + D V DN +T
Sbjct: 229 DVTIVPIPMGLA----RVGLSAAGPLPFVP----FGPDQARSLAFDNTVVDNDVT 275
>gi|222054185|ref|YP_002536547.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
gi|221563474|gb|ACM19446.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
Length = 293
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
V G TGF+G ++ + L + G ++LV +P ++ GD+ + T
Sbjct: 5 VSGGTGFVGGHLRKALLERGHHLKLLVHRPSGSYEPGVEQVEGDVTR----------PET 54
Query: 70 IKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
A + VINL+G RE+ +R +F+ + H A R A + GI R++Q+S LG
Sbjct: 55 FVRHFAGCDAVINLVGIIREFPSRGVTFQRL-HVEATRNQVEAAKQAGIKRYLQMSALGT 113
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ SR TK AE+ V TI RP+ + G +D +NK A ++ P+ GD
Sbjct: 114 RDGATSRYHRTKYQAEQFVRDSQLDYTIFRPSIVFGPKDDFINKLAGMIRTLPAVPVIGD 173
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G R+QP+ DVA AL+ T +GK Y+L G + ++L + + + + H
Sbjct: 174 GKYRLQPIAGDDVARCFAMALEMPET-IGKTYDLCGSTRLSYNDLLDCIGRALGK-SHVS 231
Query: 248 KVPFP-VAKAVAMPREILLKKVP-FPLPRPGLFNLDEIN 284
K+P P V + +P L + +P FP+ L L E N
Sbjct: 232 KIPNPLVLMKLVVP---LFQNIPAFPITMDQLLMLIEEN 267
>gi|389805584|ref|ZP_10202732.1| putative nucleoside-diphosphate sugar epimerase [Rhodanobacter
thiooxydans LCS2]
gi|388447279|gb|EIM03289.1| putative nucleoside-diphosphate sugar epimerase [Rhodanobacter
thiooxydans LCS2]
Length = 312
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 152/317 (47%), Gaps = 27/317 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TGF+G ++V +L G ++++ R E RH + G L + + DD+ +
Sbjct: 7 VILGGTGFVGSHLVPRLVADGHRIVLLSRNRE---RH-REFGVLPTVSVRSADIYDDDVL 62
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ +A A+ VINL+G SF+ V+ + R+ A E GG+ R Q+S L A
Sbjct: 63 RRQLAGADAVINLVGILNPRGRDSFQRVHVELTRRLLA-ACEAGGVRRLHQMSSLKAGQG 121
Query: 131 SPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
S+ ++ AE V L W TI +P+ + G D L++++A+ +++ PL
Sbjct: 122 L-SQYLKSRGEAEALVRASALDW-TIYQPSVIFGRGDGLVSRFAKLLRQLPALPL-ARAP 178
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
+R+ P +V DVA A+ + D + + +EL GP++ T+ E+ +R +
Sbjct: 179 SRMAPTFVDDVAEAIARCVGDAKLGVRRSFELYGPEVLTLGEI-------VRAIRAAAGL 231
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308
P+ +A+P + + F PG F+LD + +D++ + + + LGIVP
Sbjct: 232 RTPI---IALPDSLGRLQAQFAGLLPGKPFSLDNFRSLLTDSVGTVDG--YAALGIVPQA 286
Query: 309 LKGYPTEYLIWYRKGGP 325
L + L GGP
Sbjct: 287 LTRWLPSLL-----GGP 298
>gi|448327747|ref|ZP_21517069.1| NAD-dependent epimerase/dehydratase [Natrinema versiforme JCM
10478]
gi|445617376|gb|ELY70974.1| NAD-dependent epimerase/dehydratase [Natrinema versiforme JCM
10478]
Length = 306
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 38/298 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLK-LMGDLGQIVPMKFNPRDDN 68
V G TGF+G + ++LA+ G +V R +D P ++ MGD+ +
Sbjct: 5 VAGGTGFIGTNLCEELAERGHEVTALSRSPDDTGLPDGVESAMGDVSAY----------D 54
Query: 69 TIKATMAKANVVINLIGRE---YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+I T+ + V+NL+ S E+V+ E + A E G+ RF+Q+S L
Sbjct: 55 SIADTIVGHDAVVNLVSLSPLYKPPEGTSHEEVHLEGTENLV-RAAEAAGVDRFLQLSAL 113
Query: 126 GASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN--- 180
GA + K AE AV+RE L W TI+RP+ + G ++ +F K
Sbjct: 114 GADPDGNTGYIRAKGKAE-AVVRESALEW-TIIRPSVVFGDG----GEFVEFTKTLTTPY 167
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
L G G TR QP++V D+ + AAL+DD +G+ YE+GGP I T+ ++ EL+Y
Sbjct: 168 VTGLPGGGKTRFQPIWVGDLVPMLAAALEDD-AHVGETYEIGGPQIATLADVTELVYAAD 226
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
+ V +P VAK + + L VP F D+ + D V+DN +T
Sbjct: 227 GKDVTIVPIPMGVAK-LGLSAVDSLPFVP--------FGPDQGRSLEFDNTVADNDVT 275
>gi|309780278|ref|ZP_07675029.1| NADH-ubiquinone oxidoreductase [Ralstonia sp. 5_7_47FAA]
gi|404394878|ref|ZP_10986681.1| hypothetical protein HMPREF0989_03092 [Ralstonia sp. 5_2_56FAA]
gi|308920981|gb|EFP66627.1| NADH-ubiquinone oxidoreductase [Ralstonia sp. 5_7_47FAA]
gi|348613942|gb|EGY63511.1| hypothetical protein HMPREF0989_03092 [Ralstonia sp. 5_2_56FAA]
Length = 334
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 125/263 (47%), Gaps = 32/263 (12%)
Query: 12 VFGTTGFLG-----RYVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
+FG TGF+G R V + + G +++VP R E H + L ++ M +
Sbjct: 8 IFGGTGFIGSQLLSRLVTETFSAPGLPEGRMIVPTRDPESARAHNLTL--LPRVDVMDAD 65
Query: 64 PRDDNTIKATM-------AKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKE 112
D+ + A A+ VINL+G +TR +F+ V+ + RI +
Sbjct: 66 IYADDALDALFLALTERGAEHCAVINLVGVLQDTREMPYGPNFQRVHVDLPRRIVAACRR 125
Query: 113 HGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNK 171
HG + R + +S LGA + PS +K E V+ EL W T+ RP+ + G +D LN
Sbjct: 126 HG-VNRLLHMSALGADPAGPSMYLRSKGDGERVVMNSELDW-TVFRPSVVFGPQDHFLNL 183
Query: 172 WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+A + F PL R QPVYV DVAAA ALK T + Y L GP ++T
Sbjct: 184 FASMQRMAPFVPL-ACADARFQPVYVDDVAAAFINALKKPAT-IRHAYPLVGPRVYT--- 238
Query: 232 LAELMYDTIRE--YPHYVKVPFP 252
LAELM R +P ++ VP P
Sbjct: 239 LAELMRFAGRASGHPRWI-VPLP 260
>gi|170696053|ref|ZP_02887190.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
gi|170139045|gb|EDT07236.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
Length = 221
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 102 MAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAA 160
M +IA A E G+ R I +S LGA S+ S +K E+AV L W T+ RP+
Sbjct: 1 MPTKIAA-ACEGKGVHRLIHLSALGADSNGRSMYARSKGDGEKAVHAANLAW-TVFRPSV 58
Query: 161 MIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYE 220
+ G ED+ LNK+A + F PL + QPVYV DVA A+ L D + GK YE
Sbjct: 59 VFGAEDQFLNKFAFLQRIFPVIPL-AMPDAKFQPVYVGDVAKAIVNVLDLDAAN-GKTYE 116
Query: 221 LGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL 280
LGGP ++T+ EL D I + +++P +A+ AM E+ P +
Sbjct: 117 LGGPSVYTLEELVRYCGDVIGRHASIIRLPEALARMQAMTFEL--------APGEPVITR 168
Query: 281 DEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYL 317
D +++ D ++S +LG+ P ++ YL
Sbjct: 169 DNLDSMKQDNVLSRP--LAPELGLEPASIETIAPVYL 203
>gi|23296078|gb|AAN12295.1| NADH dehydrogenase [Aquifex pyrophilus]
Length = 314
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 11/264 (4%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G+TGF+GR++ ++L + G +V+ R E + L GD + + + F R +
Sbjct: 5 ITGSTGFVGRHITRKLLEEGHEVVAGVRSLE---KLRNLFGDSVRGIKLDFENRKEVFYV 61
Query: 72 ATMAKANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
K + VI+LIG YE ++ +F V H++ + A ++ G+ +F+ +S LG
Sbjct: 62 LNREKPDAVIHLIGILYELPSKGITFFKV-HYLYTKYLVEASKNAGVRKFLFMSALGTHD 120
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
+PS TK AE+ V+ TI RP+ ++G E +L + K L G
Sbjct: 121 LAPSWYHQTKKWAEKEVINSGLNYTIFRPSIILGPEQKLFYDMNKITKLLPVVALPDFGK 180
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
QPV V DVA A ALK+ T KIYEL G + + EL+ D + V +
Sbjct: 181 YPFQPVDVRDVACAYAEALKNPETDR-KIYELCGTKVVS---FKELLSDIFSHWKRKV-L 235
Query: 250 PFPVAKAVAMPREILLKKVPFPLP 273
P+ K++ +L+K+ P P
Sbjct: 236 MIPLPKSLMYIPAYILEKILEPPP 259
>gi|291278968|ref|YP_003495803.1| NAD-dependent epimerase/dehydratase [Deferribacter desulfuricans
SSM1]
gi|290753670|dbj|BAI80047.1| NAD-dependent epimerase/dehydratase [Deferribacter desulfuricans
SSM1]
Length = 295
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 138/308 (44%), Gaps = 24/308 (7%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD-LGQIVPMKFNPRDDNTIKA 72
G TGF+G +++ +V + R +P +K+ D + +V P+ T
Sbjct: 7 GGTGFVGTEILKYALSKDYEVTLLVR----NPDKVKVKNDRIDIVVGDVLKPK---TYLD 59
Query: 73 TMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ + V++L+G RE +F+ HF A ++ A + G + RFI +S GA S
Sbjct: 60 KLNNVDCVVHLVGIIREIPKEGVTFQRY-HFEATKMIVDAAKEGDVKRFIHMSANGARSE 118
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
+ + TK AEE V TI +P+ + G D +N F+KK F FGDGS
Sbjct: 119 AITDYHKTKYLAEEYVRNSGLTYTIFKPSVIYGPGDSFINMLNDFLKKTPVFSYFGDGSY 178
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
+QPVYV DVA A+++ T K + + GP++ + EL L+ + ++ VP
Sbjct: 179 SMQPVYVADVAKIFVDAIENSDT-FNKTFTVCGPEVLSYKELLRLICEVTNRKRLFIPVP 237
Query: 251 -FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
F ++ + + K FPL R L E N +N ++ L P +
Sbjct: 238 EFIISFMITL----FGKFQWFPLTRDQFEMLREGNT-------CENMEIYKLLQFEPKNI 286
Query: 310 KGYPTEYL 317
K +YL
Sbjct: 287 KDTLKKYL 294
>gi|448350869|ref|ZP_21539680.1| NAD-dependent epimerase/dehydratase [Natrialba taiwanensis DSM
12281]
gi|445635741|gb|ELY88908.1| NAD-dependent epimerase/dehydratase [Natrialba taiwanensis DSM
12281]
Length = 309
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 137/290 (47%), Gaps = 25/290 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRG-CEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G ++ +LA+ G +V R +D L DL ++ +I
Sbjct: 5 VAGGTGFIGTHLCTELAERGHEVTALSRNPTAEDADELPDEVDLSTGDVSAYD-----SI 59
Query: 71 KATMAKANVVINLIGRE--YETRNYSFEDVNHFMA-ERIAGIAKEHGGIMRFIQISCLGA 127
+A + ++NL+ Y+ + + H E + A+EHG + RF+QIS L A
Sbjct: 60 VDAVAGHDAIVNLVALSPLYQPPGGTDHETVHLGGTENLVRAAEEHG-VDRFLQISALSA 118
Query: 128 SSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
P+ TK A E+++RE L W TI+RPA + G L+ +A+ + L
Sbjct: 119 DPDGPTAYIRTKGRA-ESIVREAALSW-TIVRPAVVFGDGGEFLS-FAKRLTTPYLTGLP 175
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G TR QP++V D A + AL DD +G+ YELGGP + T+ + EL+Y+
Sbjct: 176 GGGKTRFQPIWVGDFAPLLADALVDD-FHVGRTYELGGPQVVTLADATELVYEADGRPVT 234
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295
+ +P + K + +P L VP F D+ + D V++N
Sbjct: 235 ILPIPMALTK-LGLPAADPLPFVP--------FGADQARSLEFDNTVAEN 275
>gi|15605715|ref|NP_213092.1| NADH dehydrogenase (ubiquinone) [Aquifex aeolicus VF5]
gi|2982870|gb|AAC06490.1| NADH dehydrogenase (ubiquinone) [Aquifex aeolicus VF5]
Length = 315
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 112/225 (49%), Gaps = 11/225 (4%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+GR++V++L G +V R R L G+ + + F+ +D +I+
Sbjct: 5 ITGATGFVGRHIVRELLNRGYEVHAGVRNLSKLER---LFGNQVKGYIVNFDEKD--SIR 59
Query: 72 ATMAKAN--VVINLIGREYETRN--YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ K N VI+LIG YE + +FE V++ + + ++K + +F+ +S LG
Sbjct: 60 EALGKVNPDFVIHLIGILYEEKKKGITFERVHYGHTKNLVEVSKGFN-VKKFLFMSALGT 118
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+PSR TK AE V+ TI RP+ ++G E +L + K L
Sbjct: 119 HDEAPSRYHQTKRWAEREVINSGLNYTIFRPSIILGPEQKLFFDMYKITKYIPVVALPDF 178
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHEL 232
G+ + QPV V DVA A ALK+ T KIYEL G + T EL
Sbjct: 179 GNYQFQPVDVRDVACAYAEALKNPETDR-KIYELCGTKVVTFKEL 222
>gi|17544806|ref|NP_518208.1| NADH-ubiquinone oxidoreductase [Ralstonia solanacearum GMI1000]
gi|17427095|emb|CAD13615.1| putative nadh-ubiquinone oxidoreductase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 334
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 137/297 (46%), Gaps = 33/297 (11%)
Query: 12 VFGTTGFLG-----RYVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
V G TGF+G R V + A G +V+VP R E H + L ++ M+ +
Sbjct: 8 VLGGTGFIGTQLLSRLVTETFAAPGLPDGRVIVPTRDAESARAHNLTL--LPRVDVMEAD 65
Query: 64 PRDDNTIKATM-------AKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKE 112
D+ + A + VINL+G + R +F + + R+ +
Sbjct: 66 VHADDALDALFLALTEGGGEHCAVINLVGVLQDVRAAPYGPAFRRAHVDLPRRVVDACRR 125
Query: 113 HGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNK 171
HG + R + +S LGA + PS +K E V +L W T+ RP+ + G D LN
Sbjct: 126 HG-VKRLLHMSALGADPAGPSMYQRSKGDGERIVTGSDLDW-TVFRPSVVFGPGDHFLNL 183
Query: 172 WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+A+ + F PL R QPVYV DVAAA AL D+ + G +Y L GP ++T+ E
Sbjct: 184 FARLQRLAPFVPL-ARAEARFQPVYVDDVAAAFAHAL-DNPATFGHVYPLVGPRVYTLAE 241
Query: 232 LAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGL--FNLDEINA 285
L T +P ++ P++ A+ + L +++P PL R L +D I+A
Sbjct: 242 LVRFA-GTASGHPRWI---VPLSDAMGRLQATLFEQLPGSPLSRDNLDSMRIDNISA 294
>gi|384917290|ref|ZP_10017418.1| Predicted nucleoside-diphosphate-sugar epimerase [Methylacidiphilum
fumariolicum SolV]
gi|384525323|emb|CCG93291.1| Predicted nucleoside-diphosphate-sugar epimerase [Methylacidiphilum
fumariolicum SolV]
Length = 365
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 139/270 (51%), Gaps = 24/270 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKF---NPRDDN 68
V G TGF+G+ VV+ L ++G +V V R+LK + L ++ P +F + D +
Sbjct: 6 VTGGTGFIGKSVVKLLCQLGYKVRV-------STRNLKQIKALYEL-PCEFLEGDLSDLS 57
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ + + VI+L+G E +F+ V+ + + + +KE+G + RF+ +S LG
Sbjct: 58 FARKCSSGIDAVIHLVGIIVEQGQDTFKKVHVQITKNMIQASKENG-VKRFLHMSALGTR 116
Query: 129 SSSPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNKWAQFV----KKFNFFP 183
++ SR TK AEE V EL W TI +P+ + G D + + + FP
Sbjct: 117 PNARSRYHQTKWTAEELVRNSELDW-TIFQPSVVFGIGDDFTKRLYKMLFFPNNPLLLFP 175
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G +++QP++V +VA A A+ + T K Y L GP+++++ E+ ++ D + +
Sbjct: 176 LIDGGKSKLQPIFVENVAEAFVRAIPNPNT-FHKTYTLAGPEVYSLKEILLMILD-LCQI 233
Query: 244 PHYVK-VPFPVAKAVAMPREILLKKVPFPL 272
P+ ++ PF +AM LL + +PL
Sbjct: 234 PYKIESFPFYTLSRIAMA---LLSFLVYPL 260
>gi|448394449|ref|ZP_21568254.1| NAD-dependent epimerase/dehydratase [Haloterrigena salina JCM
13891]
gi|445662491|gb|ELZ15259.1| NAD-dependent epimerase/dehydratase [Haloterrigena salina JCM
13891]
Length = 306
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 114/247 (46%), Gaps = 13/247 (5%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G + +L + G +V R DP L + ++ + ++I
Sbjct: 5 VAGGTGFIGTPLCTELHERGHEVTALSR----DPSDTDLPAGVDRVA---GDVSAYDSIA 57
Query: 72 ATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
T+A + V+NL+ Y+ + + H A E GG+ RF+Q+S LGA
Sbjct: 58 ETVAGHDAVVNLVSLSPLYQPPDEDAHERVHLGGTANLVQAAEDGGVNRFLQMSGLGADP 117
Query: 130 SSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+ + TK AAE+ V L W TI+RP+ + G L Q + L G G
Sbjct: 118 DADTEFLRTKGAAEDVVTESRLAW-TIVRPSVVFGDGAEFLEFTKQLTTPY-VTGLPGGG 175
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
TR QP++V D+ + L DD T +G+ YE+ GP I T+ + EL Y + V
Sbjct: 176 KTRFQPIWVGDLVPMLADVLDDD-THVGETYEIAGPQIVTLADATELSYAAEGKSVSIVS 234
Query: 249 VPFPVAK 255
+P +AK
Sbjct: 235 IPMSLAK 241
>gi|322368400|ref|ZP_08042969.1| hypothetical protein ZOD2009_02920 [Haladaptatus paucihalophilus
DX253]
gi|320552416|gb|EFW94061.1| hypothetical protein ZOD2009_02920 [Haladaptatus paucihalophilus
DX253]
Length = 298
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 114/231 (49%), Gaps = 22/231 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR++V++L G +V R ++ + +G + +I+
Sbjct: 5 VTGGTGFIGRHLVRELHDRGHEVTALARSPDEAAFPADVERAMGDVTAYA-------SIE 57
Query: 72 ATMAKANVVINLIGRE--YET-RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
A + VINL+ +E R + V+ + A+EHG + + +Q+S LGA
Sbjct: 58 GAFAGQDAVINLVSLSPLFEPPRGLNHVRVHLGGTRNVVRAAEEHG-VGKIVQMSALGAD 116
Query: 129 SSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFPL 184
+ P+ K AEE V +L W TI RP+ + G L+ F KK PL
Sbjct: 117 PTGPTEYIRAKGRAEELVKGSDLRW-TIFRPSVVFGEGSEFLS----FTKKLTPPYLAPL 171
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
G G TR QP++V D+A + L D + GKIYE+GGP++ T+ E+A+L
Sbjct: 172 PGGGKTRFQPIWVDDLAPILADGL--DESHDGKIYEIGGPEVLTLAEVAKL 220
>gi|134297209|ref|YP_001120944.1| NAD-dependent epimerase/dehydratase [Burkholderia vietnamiensis G4]
gi|134140366|gb|ABO56109.1| NAD-dependent epimerase/dehydratase [Burkholderia vietnamiensis G4]
Length = 322
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 137/317 (43%), Gaps = 27/317 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TGF+G +V L + G V V R E RHL+++ I ++ + D T+
Sbjct: 7 ALLGGTGFIGSRLVNALIEAGKHVRVATRRREH-ARHLQML----PIEIVELDALDARTL 61
Query: 71 KATMAKANVVINLIGREYETRNYSFE---DVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+A A+ +NLIG + R + + H G A G+ R + +S LGA
Sbjct: 62 TGFVAGAHAAVNLIGVLHGGRGSPYGPGFERAHVAVPAALGAACAQAGVRRVLHMSALGA 121
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWA-------TIMRPAAMIGTEDRLLNKWAQFVKKFN 180
S+ PS +K E A+ A TI RP+ + G D LN +A+ +
Sbjct: 122 DSNGPSMYLRSKGDGEAALRAAAASAAAGPLALTIFRPSVVFGPGDAFLNTFAKLQRTLP 181
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
PL R QPV+V DV A L D + GK YELGGP ++T+ +L +
Sbjct: 182 VLPL-AMPDARFQPVFVGDVVRAFVNTL-DLAAAHGKTYELGGPTVYTLEQLVRYCGTLV 239
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
+ V++P +A+ L +V LP + D + + + ++S
Sbjct: 240 GRHARIVRLPDALAQ--------LQARVFECLPGEPVITRDNLASMSQPNVLSGPLAL-- 289
Query: 301 DLGIVPHKLKGYPTEYL 317
+LG+ P L+ YL
Sbjct: 290 ELGLTPASLESIAPAYL 306
>gi|241664916|ref|YP_002983276.1| NADH dehydrogenase [Ralstonia pickettii 12D]
gi|240866943|gb|ACS64604.1| NADH dehydrogenase [Ralstonia pickettii 12D]
Length = 334
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 124/263 (47%), Gaps = 32/263 (12%)
Query: 12 VFGTTGFLG-----RYVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
+FG TGF+G R V + + G +++VP R E H + L ++ M +
Sbjct: 8 IFGGTGFIGSQLLSRLVTETFSAPGLPEGRMIVPTRDPESARAHNLTL--LPRVDVMDAD 65
Query: 64 PRDDNTIKATM-------AKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKE 112
D+ + A + VINL+G + R+ +F+ V+ + RI +
Sbjct: 66 IYADDALDALFLALTERGGEHCAVINLVGVLQDARDMPYGPNFQRVHVDLPRRIVAACRR 125
Query: 113 HGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNK 171
HG + R + +S LGA + PS +K E V+ EL W T+ RP+ + G +D LN
Sbjct: 126 HG-VNRLLHMSALGADPAGPSMYLRSKGDGERVVMNSELDW-TVFRPSVVFGPQDHFLNL 183
Query: 172 WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+A + F PL R QPVYV DVAAA ALK T + Y L GP I+T
Sbjct: 184 FASMQRMAPFVPL-ACADARFQPVYVDDVAAAFINALKKPAT-IRHAYPLVGPRIYT--- 238
Query: 232 LAELMYDTIRE--YPHYVKVPFP 252
LAELM R +P ++ VP P
Sbjct: 239 LAELMRFAGRASGHPRWI-VPLP 260
>gi|95928444|ref|ZP_01311192.1| NAD-dependent epimerase/dehydratase [Desulfuromonas acetoxidans DSM
684]
gi|95135715|gb|EAT17366.1| NAD-dependent epimerase/dehydratase [Desulfuromonas acetoxidans DSM
684]
Length = 297
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 12/226 (5%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT 73
G TGF+G +V+Q L G V R + + L Q+ ++ + + +K
Sbjct: 7 GATGFVGHHVIQALLLNGHTVRCLVR------KPTPSLTSLVQVETVQGDITNPAELKQA 60
Query: 74 MAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
M+ + +I+L+G R + R +FE + H A R A GI R++ +S GAS
Sbjct: 61 MSDCDAIIHLVGIIRAFPQRGITFEKL-HVEATRNIITAAAEAGIDRYLHMSANGASPDC 119
Query: 132 PSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
P +TK AEE V + L W TI RP+ + G + Q ++ P+ GDG
Sbjct: 120 PEAYGATKWRAEELVRQSRLTW-TIFRPSLIFGPDGEFTRMLIQQLRFLPMIPIIGDGHY 178
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
++ PV V DVA AL ++GKIY GPD + ++L +L+
Sbjct: 179 QLSPVNVDDVALGFANALSSP-QAIGKIYHCCGPDTCSYNDLIDLI 223
>gi|298244141|ref|ZP_06967947.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ktedonobacter
racemifer DSM 44963]
gi|297551622|gb|EFH85487.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Ktedonobacter
racemifer DSM 44963]
Length = 299
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 121/283 (42%), Gaps = 14/283 (4%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G ++V LA G QV R + + L ++ + +P T+K
Sbjct: 4 VTGATGFIGSHLVTDLAGQGEQVRCLVRDRKKAEKSLPGT-NVELVEGSTIHP---ETLK 59
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGI-----AKEHGGIMRFIQISCLG 126
+ + V++ + T + NH+ + G A + G+ R I+I LG
Sbjct: 60 EALQGIDTVVH---AAFMTADRKESAENHYNETNVTGTRNLVKAAQEAGVKRIIEIGGLG 116
Query: 127 ASSSSPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
P + AE+AV +L W TI++P+ + G + + + PL
Sbjct: 117 TKPGKPGSYMQGRYLAEQAVKESKLDW-TIIQPSVLFGKGAPFIKGLSDLIASAPVVPLI 175
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G T QP+ V DV + LK+ + GK Y +GGP+ ++ E+ +L+ T+ +
Sbjct: 176 GGGKTMFQPILVDDVVRVIEYVLKEPEQTKGKTYTIGGPEYYSFSEVFDLLLKTMGKSRP 235
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS 288
V P P+ A E +L K P LF+ D A S
Sbjct: 236 KVYAPMPLVGIGAAVMEAVLPKPPLTRAAMTLFSFDNTTAINS 278
>gi|148263716|ref|YP_001230422.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
gi|146397216|gb|ABQ25849.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
Length = 305
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ V G +GF G+Y+ +L G +V + P GD + P F+ D +
Sbjct: 6 LQVVTGASGFTGKYITARLLAQGKKV----KTITGHPHRQHPFGDRLSVAPFNFD--DPS 59
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ ++ A + N + + +FE R A E GI R + IS A
Sbjct: 60 ALIRSLEGATTLYNTYWVRFPYGDVTFEKA--VENSRTLIRAAEEAGIRRIVHISIANAD 117
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
SP + KA E + ++RP + GTE L+N A +KKF F + G G
Sbjct: 118 EGSPFPYYKAKAVVERLIAGSRLSYAVIRPTVLFGTEGILINNIAWLLKKFPLFAVPGSG 177
Query: 189 STRIQPVYVVDVAA-AVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
R+QPVYV DVA AV AA +G+++ + + GGP+ FT EL L+ I
Sbjct: 178 DYRLQPVYVDDVAELAVNAA--SEGSNL--VMDAGGPETFTYDELVRLIAAKI 226
>gi|270308491|ref|YP_003330549.1| NADH dehydrogenase-like protein [Dehalococcoides sp. VS]
gi|270154383|gb|ACZ62221.1| NADH dehydrogenase-like protein [Dehalococcoides sp. VS]
Length = 302
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 20/300 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD-NTI 70
V G +GF+G +++ +LA+ G ++ + E + + +K G V + +D +
Sbjct: 7 VTGGSGFVGGHLLPRLAENGFKIRLLVMN-ETEAKRVKTPG-----VEFVYGTVNDLPVL 60
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+M VI+L+ E +N +FE VN + + A E+G + RFI + LGAS+
Sbjct: 61 MESMKGVFAVIHLVAILRENKNATFEKVNIEGTKNMLAAAAENG-VKRFIHMGILGASAD 119
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF-PLFGDGS 189
+K AEEAV + +I++P+ M G +N + K + P+ G+G
Sbjct: 120 PSFTYLHSKYLAEEAVSKSGLDYSILKPSVMFGQGAGFINALIRSFKPYPLLAPVAGNGE 179
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
TR+QPV+V DV + + L DG + + ++GGP IFT E+ + + + V
Sbjct: 180 TRLQPVWVEDVVSCLLKML--DGEKIHQSVQIGGPQIFTYDEVLSAVMQAMGVKKPRMHV 237
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
P + + E P LP E+ A + D I ++NA+ ++ G P L
Sbjct: 238 PVSLMHPLVWLMERTSSNPPITLP--------ELKALSVDNITAENAIK-REFGFDPKPL 288
>gi|448365984|ref|ZP_21554238.1| NAD-dependent epimerase/dehydratase [Natrialba aegyptia DSM 13077]
gi|445654593|gb|ELZ07444.1| NAD-dependent epimerase/dehydratase [Natrialba aegyptia DSM 13077]
Length = 308
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 147/309 (47%), Gaps = 38/309 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRG-----CEDDPRHLKL-MGDLGQIVPMKFNPR 65
V G TGF+G ++ +LA+ G +V R ++ P + L GD+
Sbjct: 5 VAGGTGFIGTHLCTELAERGHEVTALSRNPTAEDADEFPDEVDLSTGDVSAY-------- 56
Query: 66 DDNTIKATMAKANVVINLIGRE--YETRNYSFEDVNHFMA-ERIAGIAKEHGGIMRFIQI 122
++I +A + ++NL+ Y+ + + H E + A+EHG + RF+Q+
Sbjct: 57 --DSIVDAVADHDAIVNLVALSPLYQPPGGTDHETVHLGGTENLVRAAEEHG-VDRFLQL 113
Query: 123 SCLGASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
S LGA P+ TK A E+++RE L W TI+RPA + G L+ +A+ +
Sbjct: 114 SALGADPDGPTAYIRTKGRA-ESIVREAALSW-TIVRPAVVFGDGGEFLS-FAKRLTTPY 170
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
L G G TR QP++V D + AL+D + +G+ YE+GGP + T+ + EL+Y+
Sbjct: 171 LTGLPGGGKTRFQPIWVGDFVPILADALED--SHVGRTYEIGGPQVVTLADATELVYEAD 228
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
+ +P + K I + +PF +P F D+ + D V++N + Q
Sbjct: 229 GRPVTILPIPMALTKFGL----IAVDPLPF-VP----FGTDQARSLEFDNTVAENDV--Q 277
Query: 301 DLGIVPHKL 309
G+ P L
Sbjct: 278 AFGVEPADL 286
>gi|389751191|gb|EIM92264.1| NAD-P-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 326
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 59 PMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMR 118
P+ + T++ A V++L+G + FE + AE +A AK+ R
Sbjct: 63 PIDVDVTKPETLQLAFQDAYAVVSLVG-VLQGSPEQFEKIQWRGAENVAAAAKQA--GAR 119
Query: 119 FIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKK 178
+ S +GA + S TKA E+A R P AT +RP+ + G D ++ + K
Sbjct: 120 LVHFSAIGADAQSKLPYARTKALGEQAAFRHCPDATAIRPSIVFGPGDGFFARFTKLSKI 179
Query: 179 FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSM----GKIYELGGPDIFTVHELAE 234
F P FG G+++ QPVYV D+A V +DD + GK+ E GGPD+ T ++ E
Sbjct: 180 LPFMPTFGGGTSKFQPVYVGDIAKLVEIITRDDPAILKQVKGKVIEAGGPDVITYRQVME 239
Query: 235 LMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIV 292
L + Y + + + A+ + LL++ P P LF + D++ D +V
Sbjct: 240 L----VLRYGNRTRPILSLPWAIGSIQGALLEQFP-----PNLFTITRDQVEQLKDDNVV 290
Query: 293 SDN 295
+ N
Sbjct: 291 TSN 293
>gi|187930726|ref|YP_001901213.1| NADH dehydrogenase [Ralstonia pickettii 12J]
gi|187727616|gb|ACD28781.1| NADH dehydrogenase [Ralstonia pickettii 12J]
Length = 334
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 12 VFGTTGFLG-----RYVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
+FG TGF+G R V + + G +++VP R E H + L ++ M +
Sbjct: 8 IFGGTGFIGSQLLSRLVTETFSAPGLPEGRMIVPTRDPESSRAHNLTL--LPRVDVMDAD 65
Query: 64 PRDDNTIKATM-------AKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKE 112
D+ + A + VINL+G + R +F+ V+ + RI +
Sbjct: 66 IYADDALDALFLALTERGGEHCAVINLVGVLQDAREMPYGPNFQRVHVDLPRRIVAACRR 125
Query: 113 HGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNK 171
HG + R + +S LGA + PS +K E V+ EL W T+ RP+ + G +D LN
Sbjct: 126 HG-VNRLLHMSALGADPAGPSMYLRSKGDGERVVMNSELDW-TVFRPSVVFGPQDHFLNL 183
Query: 172 WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+A + F PL R QPVYV DVAAA ALK T + Y L GP ++T
Sbjct: 184 FASMQRMAPFVPL-ACADARFQPVYVDDVAAAFINALKKPAT-IRHAYPLVGPRVYT--- 238
Query: 232 LAELMYDTIRE--YPHYVKVPFP 252
LAELM R +P ++ VP P
Sbjct: 239 LAELMRFAGRASGHPRWI-VPLP 260
>gi|448610120|ref|ZP_21660970.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax mucosum
ATCC BAA-1512]
gi|445745479|gb|ELZ96946.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax mucosum
ATCC BAA-1512]
Length = 301
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 19/253 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G +GF+G ++ ++L G V R +D + G + D +++
Sbjct: 5 VVGGSGFVGSHLCRELHSQGHDVTAMSRNPDDATLPDGVETATGDVT-------DYDSMV 57
Query: 72 ATMAKANVVINLIGRE--YETRN-YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ VINL+ Y+ Y D+ ++ A E + R++Q+S LGA
Sbjct: 58 DEFEGKDAVINLVALTPLYKPEGGYRMHDIVNWQGTENVVKAAETHDVPRYVQMSALGAD 117
Query: 129 SSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN----FFP 183
+ + +K AE AV L W I RP+ + G L + + F +P
Sbjct: 118 PDADTAYIRSKGKAENAVKSSSLDWV-IFRPSIIFGDGAEFLTFTKRLKRMFAPGLPLYP 176
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G+G TR QP+++ D+A A++DD +G+ YE+GGP++ T+ E+ E++YD+ E
Sbjct: 177 LPGNGKTRFQPIWIDDLAPMFVNAIEDDA-HVGETYEIGGPEVLTLREVTEMVYDS--EG 233
Query: 244 PHYVKVPFPVAKA 256
VP P+A A
Sbjct: 234 KSITIVPLPMALA 246
>gi|448584305|ref|ZP_21647179.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax gibbonsii
ATCC 33959]
gi|445728203|gb|ELZ79809.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax gibbonsii
ATCC 33959]
Length = 301
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 33/260 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFR--GCEDDPRHL-KLMGDLGQIVPMKFNPRDDN 68
V G +GF+G ++ ++L G V R ED P + K MGD+ D +
Sbjct: 5 VVGGSGFIGSHLCRELQSRGHSVTAMSRSPNSEDLPDGVEKAMGDV----------TDYD 54
Query: 69 TIKATMAKANVVINLIGRE--YETRNYS-FEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+I + V+NL+ +E + + D+ H+ A E + R +Q+S L
Sbjct: 55 SIAGAFEGKDAVVNLVALSPLFEPKGGNRMHDIVHWQGTENVVKAAEANDVSRLVQMSAL 114
Query: 126 GASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---- 180
GA + + +K AE+AV L W I RP+ + G ++ F K+
Sbjct: 115 GADTDGDTAYIRSKGKAEQAVKSSGLDW-VIFRPSVVFGDG----GEFVSFTKRLKGMFA 169
Query: 181 ----FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+PL G+G TR QP++V D+ + ++DD +G+ Y +GGP+ T+ E+ E++
Sbjct: 170 PGVPLYPLPGNGKTRFQPIWVGDLVPMLADGVEDD-DRVGETYRIGGPEKLTLREITEMV 228
Query: 237 YDTIREYPHYVKVPFPVAKA 256
YD E VP P+ A
Sbjct: 229 YDA--ENKSITIVPLPMGLA 246
>gi|448593126|ref|ZP_21652173.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax elongans
ATCC BAA-1513]
gi|445731152|gb|ELZ82739.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax elongans
ATCC BAA-1513]
Length = 301
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 31/259 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRG--CEDDPRHLKL-MGDLGQIVPMKFNPRDDN 68
V G +GF+G + ++L G V R ED P ++ +GD+ D +
Sbjct: 5 VVGGSGFVGSNLCRELKSRGHSVTAMSRNPTSEDLPEGVETAVGDV----------TDYD 54
Query: 69 TIKATMAKANVVINLIGRE---YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+I + V+NL+ Y D+ ++ A E + R +Q+S L
Sbjct: 55 SITDAFEGKDAVVNLVALSPLFKPDGGYRMHDIVNWQGTENVVKAAEAHDVPRLVQMSAL 114
Query: 126 GASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---- 180
GA + + +K AE AV L W TI RP+ + G +++ F KK
Sbjct: 115 GADPDADTAYIRSKGNAENAVKSSGLDW-TIFRPSIIFGEGAEIID----FTKKLKGMFA 169
Query: 181 ----FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+PL G+G TR QP+++ D+ AL+DD +G+ YE+GGP+I T+ ++ E++
Sbjct: 170 PGVPLYPLPGNGRTRFQPIWIDDLTPMFGEALEDD-AHVGETYEIGGPEILTLRDVTEMI 228
Query: 237 YDTIREYPHYVKVPFPVAK 255
Y++ + V +P P+A+
Sbjct: 229 YESEGKSITIVPLPMPLAR 247
>gi|118594420|ref|ZP_01551767.1| NAD-dependent epimerase/dehydratase [Methylophilales bacterium
HTCC2181]
gi|118440198|gb|EAV46825.1| NAD-dependent epimerase/dehydratase [Methylophilales bacterium
HTCC2181]
Length = 293
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 123/234 (52%), Gaps = 20/234 (8%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKF-NPRDD 67
+ ++FG TGF+G ++ +L K ++ + R K+ L + +F RDD
Sbjct: 3 VVSIFGGTGFIGTELIHELEKKNYEIRLFTRR--------KIPHTLNTLSKTRFIQLRDD 54
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ + ++++I+L+G +E + +F+DV+ ++++ IA++ I RFI I LGA
Sbjct: 55 TKLSNELIGSDIIIDLVGILHEQKGITFDDVHSGRLKKLSKIAQKL-NIKRFIHIGALGA 113
Query: 128 SSSSPSRVFSTKAAAEEAVLRE---LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
S ++PS+ +K E+ + ++ L W TI +P+ + G +D+ +N + + +F P+
Sbjct: 114 SVNAPSKYLQSKGKGEKHIKKQCSNLAW-TIYKPSIVFGIDDKFVNLFHNII---SFTPI 169
Query: 185 FGDGS--TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
G S + QP++V D+ + + DD + K + + GP ++ L +L+
Sbjct: 170 IGLISPHSMFQPIWVKDLVDIIINGI-DDKKTFQKTFNVAGPTSYSFMGLIKLI 222
>gi|299756164|ref|XP_001829137.2| NADH dehydrogenase [Coprinopsis cinerea okayama7#130]
gi|298411552|gb|EAU92772.2| NADH dehydrogenase [Coprinopsis cinerea okayama7#130]
Length = 321
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 141/306 (46%), Gaps = 31/306 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP---MKFNPRD-- 66
V GF+G+++ + +A S +VP R L+ L +P + P D
Sbjct: 9 VLCGAGFIGKHIAKCIA---SNPVVPRRIQLSSRNPTALLETLQTEIPSEILSAVPVDIT 65
Query: 67 -DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
T++ A+ V++++G + + + FE + AE A AKE R I S +
Sbjct: 66 KPGTLQPAFEDAHTVVSMVGLLHGSLS-DFEKIQVKGAENAALAAKEA--GARLIHFSAI 122
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GA ++S TKA E AV P ATI+RP+ + G ED N++A+ F P+F
Sbjct: 123 GADATSDIAYAKTKALGERAVREACPDATIIRPSLVFGPEDDFFNRFAKLSAFLPFLPVF 182
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGT----SMGKIYELGGPDIFTVHELAELMYDTIR 241
DG+++ QPVY D+ V + D GKI E GGP TVH+ +LM ++
Sbjct: 183 NDGTSKFQPVYAGDLGKGVELMTRGDPAIEREISGKILEAGGP---TVHDFRQLMAFVLK 239
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL--DEINAYTSDTIVSDN---- 295
P + + +V M + +++K+P LF + D+I D +V+ N
Sbjct: 240 YIPRTRPI-ISLPLSVGMVQAAVMEKLPV-----NLFTITRDQIKQLQLDNVVNPNPGPD 293
Query: 296 ALTFQD 301
A+ F D
Sbjct: 294 AVDFHD 299
>gi|393775168|ref|ZP_10363482.1| putative NAD-dependent epimerase/dehydratase [Ralstonia sp. PBA]
gi|392717745|gb|EIZ05305.1| putative NAD-dependent epimerase/dehydratase [Ralstonia sp. PBA]
Length = 344
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 147/340 (43%), Gaps = 53/340 (15%)
Query: 12 VFGTTGFLGRYVVQQLAKMGS--------------------------QVLVPFRGCEDDP 45
V G +GF+G +V+ +LA + + ++L P R
Sbjct: 8 VIGGSGFIGSHVLTRLAALAATPGERLPEPVTRAAWVPGALPDRVPGRILAPTRDLRGAR 67
Query: 46 RHLKLMGDLGQIVPMKFNPRDDNTIK---ATMAKANVVINLIGREYETRNY----SFEDV 98
L L +L ++ + DD T+ A + + VINL+G ++ R F
Sbjct: 68 HLLPLPVEL-----VEADVHDDATLDRLLAALGEDGTVINLVGILHDRRGTPYGPGFAKA 122
Query: 99 NHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAV-LRELPWATIMR 157
+ + R+ + HG + R + +S LGA S+ PS +K E AV + L W T+ R
Sbjct: 123 HVALPRRLVAMCARHG-VRRLLHMSALGAESAGPSMYLRSKGDGEAAVTMSMLDW-TVFR 180
Query: 158 PAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGK 217
P+ + G D LN +A+ + F PL G+ R QP+ V DVA A+ A + T + +
Sbjct: 181 PSVVFGPGDSFLNLFARMQRFAPFVPLACAGA-RFQPIAVEDVAQAIVNAFGNAET-IHQ 238
Query: 218 IYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGL 277
Y+LGGP ++T+ EL L +++P + + AM +L+ P L
Sbjct: 239 CYDLGGPQVYTLEELVRLAGQAAGHPRPVMRLPAALGRLQAM----MLEHAPG----GPL 290
Query: 278 FNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYL 317
+ D +++ D ++ LGI P L+ E L
Sbjct: 291 MSRDNLDSMRVDNVLHGPVSPV--LGITPRHLESSLAEVL 328
>gi|37523204|ref|NP_926581.1| oxidoreductase [Gloeobacter violaceus PCC 7421]
gi|35214207|dbj|BAC91576.1| gll3635 [Gloeobacter violaceus PCC 7421]
Length = 298
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 136/284 (47%), Gaps = 28/284 (9%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDL--GQIVPMKFNPRDDNTIK 71
G TGF+G + + L + G V R D L DL G + DD K
Sbjct: 6 GATGFIGSHTARTLRERGLSVRALVRSGADTSALKALEVDLVVGHL--------DD---K 54
Query: 72 ATMAKA----NVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
A++ +A + +++L+G RE +FE + H R A G+ +F+ IS +
Sbjct: 55 ASLVRACTGVDAIVHLVGIIRELPP-TVTFERI-HVEGTRNLLAAATEAGVRKFVYISAI 112
Query: 126 GASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQ-FVKKFNFF 182
G+ + +R TK A EA++R L W I+RP+ + G D +N A V+K F
Sbjct: 113 GSRPDAIARYHQTKWAT-EALVRSSGLTW-VILRPSVVFGPGDEFINLLANDLVRKPPFI 170
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
P+ G G+ ++QP++V D+ A V A + G+I E+GGP+ ++HE+ L+ +R
Sbjct: 171 PVIGPGTNKLQPLWVKDL-AEVIARCTTSSSFDGRILEVGGPEQLSLHEILALLARHLRV 229
Query: 243 YPHYVKVPFPVAK-AVAMPREILLKKVPFPLPRPGLFNLDEINA 285
+V +P + + AVA+ I + +P + + D I A
Sbjct: 230 RKPFVSIPIALVQPAVALGSAIAPQLLPITADQLTMLQEDNITA 273
>gi|345863267|ref|ZP_08815479.1| NAD-dependent epimerase/dehydratase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345125728|gb|EGW55596.1| NAD-dependent epimerase/dehydratase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 317
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 147/321 (45%), Gaps = 31/321 (9%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP----MKFNPRD 66
+ G +GF+G+++V +L G V R RH +L +++P +K N D
Sbjct: 7 CILGGSGFVGQHLVARLGNKGISSRVITR---HPQRHRQL-----KVIPGTELVKSNIFD 58
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + VINLIG ET SF ++ + + + + GI R + +S L
Sbjct: 59 RAALSRQFQGCDAVINLIGTLNETTGQSFHRLHVELVDVVVEACRS-AGIKRLLHMSALN 117
Query: 127 ASSSS-PSRVFSTKAAAEE-AVLRELPWATI--MRPAAMIGTEDRLLNKWAQFVKKFNF- 181
AS ++ S TK E A R +A + RP+ + G D N++A +++
Sbjct: 118 ASEANGSSHYLRTKGEGESWAHTRGGGFAAVTSFRPSVIFGPGDSFFNRFAGLLERAPLL 177
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
FPL +R PVYV DV A + AL DD + G Y+L GP F++ EL TI
Sbjct: 178 FPL-ACAESRFAPVYVGDVVEAFSQAL-DDSRTFGHHYDLCGPRSFSLGELVSYTAQTIG 235
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
+ ++ + + A + +++K+P +P F +D + SD++ +N L +
Sbjct: 236 KQ----RILMELGDSAARLQARVMEKLP---GKP--FTMDNYLSLQSDSVCDENGL--EQ 284
Query: 302 LGIVPHKLKGYPTEYLIWYRK 322
LGI P ++ YL R+
Sbjct: 285 LGIKPIDIEAVVPLYLAHQRQ 305
>gi|399577284|ref|ZP_10771037.1| nucleoside-diphosphate sugar epimerase [Halogranum salarium B-1]
gi|399237667|gb|EJN58598.1| nucleoside-diphosphate sugar epimerase [Halogranum salarium B-1]
Length = 294
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 116/253 (45%), Gaps = 26/253 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLM-GDLGQIVPMKFNPRDDN 68
V G +GF+G + ++L G V V R EDD P +K + GD+ D +
Sbjct: 5 VIGGSGFIGTNLSRELVDRGHDVTVLARNPEDDELPDSVKTVSGDV----------TDYD 54
Query: 69 TIKATMAKANVVINLIGRE--YETRNYSFEDVN-HFMAERIAGIAKEHGGIMRFIQISCL 125
+I+ N VI L+ ++ + + + H A A E + RFIQ+S L
Sbjct: 55 SIEGAFEGQNAVIFLVALSPLFKPKGGDQKHLEIHLGGTENAVKAAEAHDVKRFIQMSAL 114
Query: 126 GASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---F 181
GA P+ K AE V EL W TI RP+ + G ++ F KK
Sbjct: 115 GADPDGPTAYIRAKGQAENVVQASELKW-TIFRPSVVFGEG----GEFVSFTKKLAPPYV 169
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
PL G G TR QP++V D+ + AL DD +GK YE+GGP+ T+ E+A+L +
Sbjct: 170 TPLPGGGKTRFQPIWVDDLVPMLADALDDD-AHVGKTYEVGGPERLTLAEVAKLAHGADG 228
Query: 242 EYPHYVKVPFPVA 254
V +P +A
Sbjct: 229 RSVTVVPIPMGLA 241
>gi|449015623|dbj|BAM79025.1| NADH dehydrogenase I alpha subcomplex 9 [Cyanidioschyzon merolae
strain 10D]
Length = 362
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 125/284 (44%), Gaps = 34/284 (11%)
Query: 65 RDDNTIKATMAKANVVINLIGREYETR-NYSFEDVNHFMAERIAGIAK-----EHGGIMR 118
+++ ++A V NL+G YET +FE V+ AE I+ K EH
Sbjct: 79 QEEQVLQALRPLPQSVANLVGLLYETPPERTFEKVHVKAAENISKAFKLNEQAEHTASSE 138
Query: 119 F-----IQISCLGASSSSPSRVFS-TKAAAEEAVLREL-PWATIMRPAAMIGTEDRLLNK 171
Q+S +GA ++ ++ +K AE+A+L L I+RP+ + G D+ +
Sbjct: 139 LERPIMTQVSAIGADFTAVHSAYARSKGLAEQALLSHLGKQVLIIRPSIVFGPGDQFFTR 198
Query: 172 WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV----------------TAALKDDGTSM 215
+ + PL G G TR QPVYV D+A A+ ++A +
Sbjct: 199 FRDMARFSPALPLIGTGDTRFQPVYVEDLALALARSILPAERKKYVAMESSAESSMDSEH 258
Query: 216 GKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRP 275
+I+ELGG DI T EL M ++ V +P VA A E+L + VP P
Sbjct: 259 EQIFELGGRDILTFRELMARMLSVMQMRRLLVPIPLSVANIQAQASELLHRMVP---SIP 315
Query: 276 GLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIW 319
+ D+I D +V TF+DLGI + +G E L +
Sbjct: 316 PMLTRDQIALLQRDNVVHTGYRTFRDLGI--DQPRGVDAETLTY 357
>gi|328954019|ref|YP_004371353.1| NAD-dependent epimerase/dehydratase [Desulfobacca acetoxidans DSM
11109]
gi|328454343|gb|AEB10172.1| NAD-dependent epimerase/dehydratase [Desulfobacca acetoxidans DSM
11109]
Length = 296
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 29/314 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFR-GCEDDPRHLKLMGDLGQIVPMKFNPRD---D 67
V G TGF+G+ VV+QL QV R G E LG ++F P D
Sbjct: 5 VTGGTGFVGKEVVRQLLAHNHQVRCLVRPGSEKK---------LGAAPGVEFAPGDVTRP 55
Query: 68 NTIKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ + + + V++L+G RE+ +R +F+ + HF A + A + I R++ +S L
Sbjct: 56 ESLPSAVQGCDAVVHLVGIIREFPSRGITFQKM-HFEATQNIVEATKKANIRRYLHMSAL 114
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A + + TK AEE V+ TI RP+ + G D +N + +K+ + P+
Sbjct: 115 EAKPAPVAGYHQTKQQAEEYVMASGLTFTIFRPSIIYGPGDAFINLFKDQIKRLSLVPVI 174
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDG +IQPV V VA AL+ S + Y++GGP+ EL + + + +
Sbjct: 175 GDGRYQIQPVPVWVVAQGFALALETP-ISENRSYDVGGPEPLRFDELIDTVAQVLGKKVG 233
Query: 246 YVKVP-FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+ +P +P+ + A+ L FP+ D+I + +A ++D GI
Sbjct: 234 KIHLPVWPLRLSAAL----LQGFAWFPV------TTDQITMLLAGNTCDPSAF-YRDFGI 282
Query: 305 VPHKLKGYPTEYLI 318
P L YL+
Sbjct: 283 QPVPLAAGLASYLV 296
>gi|404491554|ref|YP_006715660.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Pelobacter carbinolicus DSM 2380]
gi|77543721|gb|ABA87283.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
[Pelobacter carbinolicus DSM 2380]
Length = 297
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 23/250 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN--- 68
V G TGF+G V++QL G + P L G G++ P R+ +
Sbjct: 5 VTGATGFVGHEVIRQLLAAGHR-----------PVCLVRPGSEGKLPPAVDEIREGDVTR 53
Query: 69 --TIKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+++ +A V++L+G REY + +F+ ++ + AK + RF+ +S
Sbjct: 54 PESLRGALAGCEAVVHLVGIIREYPRQKVTFDRLHRQATAHMLSAAKAQK-VQRFVLMSS 112
Query: 125 LGASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
GA + + + +K AE+ + L W TI RP+ M G ED A V+ P
Sbjct: 113 NGAEAEGSTAYYRSKWKAEQLLKASSLDW-TIFRPSVMYGAEDNFCTLLASMVRILPVVP 171
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
+FGDG RI PV V DVAA + A+L + G+ + G + T EL +++ +R
Sbjct: 172 VFGDGCYRIAPVAVQDVAATIVASLARP-DACGRSFACCGDQMVTFDELLDIIGGVLRRR 230
Query: 244 PHYVKVPFPV 253
+ VKV P+
Sbjct: 231 -NVVKVHQPL 239
>gi|284163930|ref|YP_003402209.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM
5511]
gi|284013585|gb|ADB59536.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM
5511]
Length = 306
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 133/296 (44%), Gaps = 31/296 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G + +L G +V R D + G + ++I
Sbjct: 5 VAGGTGFIGTNLCTELNDRGHEVTALSRNPSDADLPAGVERATGDVSAY-------DSIA 57
Query: 72 ATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
T+A + V+NL+ Y+ + + H A E G + RF+QIS LGA
Sbjct: 58 ETVADHDAVVNLVSLSPLYQPPDEDAHERVHLGGTANLVRAAEDGDVDRFVQISGLGADP 117
Query: 130 SSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFPL 184
+ + TK AE AV+R+ L W TI+RP+ + G L +F K+ L
Sbjct: 118 DADTEFLRTKGEAE-AVVRDSHLAW-TIVRPSVVFGDGAEFL----EFTKRLTTPYVTGL 171
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G TR QP++V D+ + AL D GT +G+ YE+ GP I T+ + EL Y +
Sbjct: 172 PGGGKTRFQPIWVGDLVPMLADALAD-GTHVGETYEIAGPQIVTLADATELSYAAEGKSV 230
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT-SDTIVSDNALTF 299
V +P +AK + VPF LP F D+ + S+T+VS++ F
Sbjct: 231 SIVSIPMSLAKLGLS----AIDPVPF-LP----FGADQARSLEMSNTVVSNDVSAF 277
>gi|78067849|ref|YP_370618.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. 383]
gi|77968594|gb|ABB09974.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. 383]
Length = 319
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 133/314 (42%), Gaps = 26/314 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+G +V L + G QV + R D RHL+++ + ++ D T+
Sbjct: 8 LLGGTGFIGSRLVNALIESGKQVRIGTRR-RDHARHLQML----PVEVVELEALDTRTLA 62
Query: 72 ATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+A A+ INL+G + R FE + + +A E G + R + +S LGA
Sbjct: 63 RFVAGAHAAINLVGVLHGGRGTPYGPGFERAHVTLPAALATACTEVG-VRRVLHMSALGA 121
Query: 128 SSSSPSRVFSTKAAAEEAV----LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
S S +K E A+ + TI RP+ + G D LN +A + P
Sbjct: 122 DSHGASMYQRSKGDGEAALHAIAATDSLALTIFRPSVVFGPGDAFLNTFANLQRSVPVLP 181
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L R QPV+V DV A L D S GK YELGGP ++T+ +L +
Sbjct: 182 L-AMPDARFQPVFVGDVVRAFVNTL-DLAASHGKTYELGGPTVYTLEQLVRYCGTLVGRQ 239
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
V++P +A+ A E LP + D + + ++S +LG
Sbjct: 240 ARIVRLPDALARLQASVFEC--------LPGEPVLTRDNLATMSVPNVLSGP--LAPELG 289
Query: 304 IVPHKLKGYPTEYL 317
I P L+ YL
Sbjct: 290 ISPASLESIAPAYL 303
>gi|448308312|ref|ZP_21498189.1| NAD-dependent epimerase/dehydratase [Natronorubrum bangense JCM
10635]
gi|445593600|gb|ELY47769.1| NAD-dependent epimerase/dehydratase [Natronorubrum bangense JCM
10635]
Length = 330
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 118/250 (47%), Gaps = 19/250 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRG--CEDDPRHLKLM-GDLGQIVPMKFNPRDDN 68
V G TGF+G + +L + G +V R D P +++ GD+ +
Sbjct: 40 VAGGTGFIGTALCTELHERGHEVTALSRSPRSSDLPAAVEVARGDVSAY----------D 89
Query: 69 TIKATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I T+A+ + V+NL+ Y+ + + + H A E G + RF+Q+S LG
Sbjct: 90 SIAETVAEHDAVVNLVALSPLYKPPSGADHETVHLGGTANLVRAAEDGDVDRFVQMSALG 149
Query: 127 ASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A + + TK AE V +L W TI RP+ + G + Q + L
Sbjct: 150 ADPNGDTEYIRTKGEAERVVRDSQLEW-TIFRPSVVFGEGSEFIEFTKQLTTPY-VTGLP 207
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G TR QP++V D+ + AL +D + +G+IYE+ GP I T+ + EL Y+ +
Sbjct: 208 GGGKTRFQPIWVGDLVPMLADAL-EDASHVGEIYEVAGPQIVTLSDATELAYEAEGKSVS 266
Query: 246 YVKVPFPVAK 255
+ +P P+AK
Sbjct: 267 ILSIPMPLAK 276
>gi|410697116|gb|AFV76184.1| nucleoside-diphosphate-sugar epimerase [Thermus oshimai JL-2]
Length = 287
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 113/239 (47%), Gaps = 22/239 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-LMGDLGQIVPMKFNPRDDNTI 70
V G TGFLG YV++ L + G LV R P ++ L GD+ + VP D +
Sbjct: 5 VIGGTGFLGGYVLKALLERGHTPLVLARRPRPLPEGVRYLPGDIAREVP------DLRGV 58
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+A A ++ RE R +F +V H R A E G+ R + +S LGA
Sbjct: 59 EAVFYLAGII-----RE---RGQTFREV-HLEGVRNTLEAMERSGVDRLVHLSALGARRG 109
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ--FVKKFNFFPLFGDG 188
+ SR F TKA AE + + AT++RP+ + G D K + + F PL GDG
Sbjct: 110 TGSRYFETKAEAEALIAQSGLKATLLRPSLIFGPGDEFFGKILRGLVCQPLPFVPLLGDG 169
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPHY 246
+PVY DVA AL+ G + +L GP +T+ L EL+ + + R+ P +
Sbjct: 170 GFPFRPVYAGDVAEVAVGALEKG--VFGPL-DLVGPKEYTLRGLLELVMEAVGRKKPFF 225
>gi|320450537|ref|YP_004202633.1| NADH-ubiquinone oxidoreductase 39 kda subunit/nadh dehydrogenase
[Thermus scotoductus SA-01]
gi|320150706|gb|ADW22084.1| NADH-ubiquinone oxidoreductase 39 kda subunit/nadh dehydrogenase
[Thermus scotoductus SA-01]
Length = 287
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR-HLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+GR++V ++ + G LV R D P+ + + GD+ + VP
Sbjct: 5 VVGGTGFVGRHLVARIVQGGHTPLVLSRTPRDLPKGAVHIPGDITREVP----------- 53
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
T+ I L G E ++ +F V H R +A + G+ R + +S LGA
Sbjct: 54 --TLEGVEAAIYLAGIIRE-KDQTFRQV-HVEGVRNLLVALKRAGVGRLLHMSALGARRG 109
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ--FVKKFNFFPLFGDG 188
S SR TKA AEE V I RP+ + G D + + F PL GDG
Sbjct: 110 SGSRYHETKAEAEELVRDSGLSYAIFRPSLIFGPGDEFFGQVLRGLVCGPLPFVPLIGDG 169
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
S R +PVYV DVA A AL+ + ++L GP +T EL L + ++
Sbjct: 170 SFRFRPVYVGDVAEAFAGALE---RGLEGTFDLVGPKEYTFRELLGLCMRVVGRRKPFLP 226
Query: 249 VPFPVAKAVAMPREILLKKVPF 270
+P + +A+P LL ++PF
Sbjct: 227 IPLWLTD-LAVP---LLSRLPF 244
>gi|448577835|ref|ZP_21643270.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax larsenii
JCM 13917]
gi|445726376|gb|ELZ77992.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax larsenii
JCM 13917]
Length = 301
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 121/259 (46%), Gaps = 31/259 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRG--CEDDPRHLKL-MGDLGQIVPMKFNPRDDN 68
V G +GF+G + ++L G V R ED P ++ +GD+ D +
Sbjct: 5 VVGGSGFVGSNLCRELKSRGHSVTAMSRNPTSEDLPEGVETAVGDV----------TDYD 54
Query: 69 TIKATMAKANVVINLIGRE---YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+I + V+NL+ Y D+ ++ A E + R +Q+S L
Sbjct: 55 SITDAFEGKDAVVNLVALSPLFKPDGGYRMHDIVNWQGTENVVKAAEAHDVPRLVQMSAL 114
Query: 126 GASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---- 180
GA + + +K AE AV L W TI RP+ + G +++ F KK
Sbjct: 115 GADPDADTAYIRSKGKAENAVKSSGLDW-TIFRPSIIFGEGAEIID----FTKKLKGMFA 169
Query: 181 ----FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+PL G+G TR QP+++ D+ A++DD +G+ YE+GGP+I T+ ++ E++
Sbjct: 170 PGVPLYPLPGNGRTRFQPIWIDDLTPMFGEAIEDD-AHVGETYEIGGPEILTLRDVTEMI 228
Query: 237 YDTIREYPHYVKVPFPVAK 255
Y++ + V +P P+A+
Sbjct: 229 YESEGKSITIVPLPMPLAR 247
>gi|374368710|ref|ZP_09626755.1| putative NAD-dependent epimerase/dehydratase [Cupriavidus
basilensis OR16]
gi|373099683|gb|EHP40759.1| putative NAD-dependent epimerase/dehydratase [Cupriavidus
basilensis OR16]
Length = 341
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 29/245 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFR---------------GCEDDPRHLKLMGDLGQ 56
V G GF+G ++V +LA + + P D H + + L +
Sbjct: 8 VIGGAGFVGSHLVARLAGVATASATPLEPGTVVEPPLDPERILAATRDAEHAQHLLLLPR 67
Query: 57 IVPMKFNPRDDNTIKA---TMAKANVVINLIGREYETRNYSF----EDVNHFMAERIAGI 109
+ ++ + R+D + A T+ +V+NL G + R + + + RI
Sbjct: 68 VEVIELDVRNDVALNAAIGTLGTDGIVVNLAGILHGERAEPYGAAFAAAHVALPRRIVEA 127
Query: 110 AKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDR 167
+ G+ R + +S LGA S+ PS +K E V+RE L W TI RP+ M G +D
Sbjct: 128 CRS-TGVRRLLHMSALGADSAGPSMYLRSKGDGER-VVRESALDW-TIFRPSVMFGPDDH 184
Query: 168 LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIF 227
LN +AQ + PL R QPVYV DVA A+ A+ T +G Y+L GP +F
Sbjct: 185 FLNLFAQMQQLAPVVPL-ACAQARFQPVYVQDVAQAMVNAMATPAT-IGHAYDLAGPQVF 242
Query: 228 TVHEL 232
T+ EL
Sbjct: 243 TLEEL 247
>gi|114776895|ref|ZP_01451938.1| NAD-dependent epimerase/dehydratase [Mariprofundus ferrooxydans
PV-1]
gi|114552981|gb|EAU55412.1| NAD-dependent epimerase/dehydratase [Mariprofundus ferrooxydans
PV-1]
Length = 317
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 29/289 (10%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G +GF+GR + +Q G V V GC R ++ D + + + D I
Sbjct: 6 CVIGGSGFVGRAIAKQAVTAGHTVTV---GCRHPERARAMLVD--GVRLKRVDVVDGRGI 60
Query: 71 KATMAKANVVINLIGREYETRNYSFE-----DVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ + VI L+G +E Y+F+ V H +A A + G+ +++ +S L
Sbjct: 61 DEAIKGCDTVIYLVGLLFERGRYNFQAAHVDGVEHVLA------ACQRAGVGQYLHMSAL 114
Query: 126 GASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
GA + S ++K AE+ V L W TI RP+ + G D +K+ P+
Sbjct: 115 GAGAVPGSSYATSKGEAEKHVRASGLNW-TIFRPSIIYGAGDSFFSKFKTISSALPVMPV 173
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G TR QPV+V DVA A + + T+ + YELGGP ++ +L E+ D +
Sbjct: 174 I-CGETRFQPVWVEDVARAFVGTIGNRHTA-NQCYELGGPATYSFKQLLEMTLDALGRKR 231
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293
+K+P A+ L+ + LP P L D++ D +VS
Sbjct: 232 LLLKLPNFAAR--------LMATISSLLPTPPLTK-DQLMLLGHDNVVS 271
>gi|163783846|ref|ZP_02178826.1| NADH dehydrogenase (ubiquinone) [Hydrogenivirga sp. 128-5-R1-1]
gi|159880895|gb|EDP74419.1| NADH dehydrogenase (ubiquinone) [Hydrogenivirga sp. 128-5-R1-1]
Length = 195
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 100/198 (50%), Gaps = 12/198 (6%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT 73
G+TGF+GRY+ +L+K +++P R E + L L + I F D +
Sbjct: 7 GSTGFVGRYIANELSK-NHYLILPVRNFEKARKVLNLNENTKLI---GFTENLDKLV--V 60
Query: 74 MAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
++VINL+G +E +N +FE V++ E++ A + I FIQ+S LGA +S
Sbjct: 61 KESPDIVINLLGILKEDREKNITFEKVHYTFTEKLVNGAVK-SDIKHFIQMSALGADINS 119
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
SR TKAAAEE V +I RP+ +IG E L ++ +F K P F +
Sbjct: 120 KSRYLKTKAAAEEYVKASGLHYSIFRPSIIIGREQLLFKEFKKFSK---ITPFFFAPKGK 176
Query: 192 IQPVYVVDVAAAVTAALK 209
+QPV++ DV L+
Sbjct: 177 VQPVHIFDVKDCFLKVLE 194
>gi|456064331|ref|YP_007503301.1| NAD-dependent epimerase/dehydratase [beta proteobacterium CB]
gi|455441628|gb|AGG34566.1| NAD-dependent epimerase/dehydratase [beta proteobacterium CB]
Length = 302
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 135/293 (46%), Gaps = 22/293 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G GF+GR + QL G VL+P R R L++ L ++ + + +T++
Sbjct: 7 LIGGNGFVGRVLAAQLQVEGYSVLLPTRHLAS-ARELRM---LPKVHLEDADVHEFDTLQ 62
Query: 72 ATMAKAN---VVINLIGREYETRNYSFEDV---NHFMAERIAGIAKEHGGIMRFIQISCL 125
++ VINL+G ++ + V H + A + G+ R++ +S L
Sbjct: 63 ELCSRIKPNGAVINLVGVLHDKPAQPYGKVFQAAHVELPKNIITAMQLHGLKRYLHMSAL 122
Query: 126 GASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
GA S+ PS +K E AV L W TI RP+ + G +D+ +N +A+ K F PL
Sbjct: 123 GADSNGPSMYQRSKGDGEAAVKASNLDW-TIFRPSVIFGAQDQFINLFAKLTKLFPAMPL 181
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G+ + QPV V DVA+A +LK T + + Y+L GP ++T+ E+ E +
Sbjct: 182 ANSGA-QFQPVSVDDVASAFAKSLKMPST-IHQSYDLVGPTVYTMKEIVEFAARKVDTKC 239
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297
+ VP V A+ E LP P L + D I + I+ N +
Sbjct: 240 AIIPVPDFVGYLQALAFEF--------LPVPTLMSRDNIASMQVSNILPLNGI 284
>gi|448360008|ref|ZP_21548653.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
gi|445641303|gb|ELY94385.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
Length = 309
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 135/306 (44%), Gaps = 31/306 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRG-CEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G ++ +L + +V R +D +L + + D TI
Sbjct: 5 VAGGTGFIGSHLCTELVERDHEVTSLSRNPTSEDAANLP-----DDVTLASGDVSDYGTI 59
Query: 71 KATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
T+ + V+N + Y+ + + + H A E G I RF+QIS LGA
Sbjct: 60 ADTVDGHDAVVNFVSLSPLYQLPSGTDHETVHLGGTENLIRAAEDGDIERFVQISALGAD 119
Query: 129 SSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
P+ K AEE ++RE L W TI+RP+ + G L Q + L G
Sbjct: 120 PDGPTPYIRAKGRAEE-IVREAALGW-TIVRPSIVFGDGAEFLEFTKQLTTPY-VTGLPG 176
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G TR QP++V D A + L+DD + +G+ YE+GGP I T+ + EL+Y+
Sbjct: 177 GGETRFQPIWVGDFAPILADVLEDD-SHVGQTYEIGGPQIVTLADATELIYEAEGRPVAI 235
Query: 247 VKVPFPVAK---AVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
+P + K AVA P L +PF + D +T+ +++ TF G
Sbjct: 236 FPIPMALTKLGLAVADP----LPLIPFGTEQGESLEFD-------NTVATNDVTTF---G 281
Query: 304 IVPHKL 309
I P L
Sbjct: 282 INPEVL 287
>gi|124268480|ref|YP_001022484.1| nucleoside-diphosphate-sugar epimerase [Methylibium petroleiphilum
PM1]
gi|124261255|gb|ABM96249.1| nucleoside-diphosphate-sugar epimerase [Methylibium petroleiphilum
PM1]
Length = 316
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 143/312 (45%), Gaps = 26/312 (8%)
Query: 12 VFGTTGFLGRYVVQQL----AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
+ G TGF+G + ++L G+++ VP R E R + L + ++ + DD
Sbjct: 6 ILGGTGFVGSALCEKLVAHFGAAGARLTVPTRRAERAKR----LAMLPTVELVETDLHDD 61
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ + + VINL+ + + FE V+ + +R+A K G+ R + +S LGA
Sbjct: 62 GRLTRLLFGRDAVINLVAILHGSAE-EFERVHVALPQRLARACKV-AGVPRVVHVSALGA 119
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
++ +PS +KAA E A+ T++RP+ + G+ DR LN +AQ F PL G
Sbjct: 120 AADAPSNYLRSKAAGEAALRAAGLDLTVLRPSVIFGSGDRFLNLFAQLQAVFPLMPLAG- 178
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
+ QPV+V DVAAA+ +L ++ E GP ++T LAEL+ R H
Sbjct: 179 ADAKFQPVWVEDVAAAIVRSLVSPAP---EVVECVGPHVYT---LAELVRLAGRWSGHAR 232
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPG--LFNLDEINAYTSDTIVSDNALTFQDLGIV 305
V + +P + + PG L + D + + + S + Q LGI
Sbjct: 233 PV-------LPLPDTLGRAQAALLALLPGTPLMSADNLASMRVPNVASGSLPGLQALGIT 285
Query: 306 PHKLKGYPTEYL 317
P L+ YL
Sbjct: 286 PAALEAVGPSYL 297
>gi|254251182|ref|ZP_04944500.1| hypothetical protein BDAG_00358 [Burkholderia dolosa AUO158]
gi|124893791|gb|EAY67671.1| hypothetical protein BDAG_00358 [Burkholderia dolosa AUO158]
Length = 319
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 134/315 (42%), Gaps = 26/315 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TGF+G +V L G V + R D RHL ++ + ++ + D +
Sbjct: 7 ALLGGTGFIGSRLVNALVDAGKHVRIGTR-RRDHARHLSML----PVEIVELDAFDTRAL 61
Query: 71 KATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+A A+ +NL+G + R FE + + +A E G + R + +S LG
Sbjct: 62 ARFVAGAHAAVNLVGVLHGGRGTPYGPGFERAHVALPGALAAACVEVG-VRRVLHMSALG 120
Query: 127 ASSSSPSRVFSTKA---AAEEAVLRELPWA-TIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
A S+ PS +K AA AV A TI RP+ + G D LN +A +
Sbjct: 121 ADSNGPSMYQRSKGDGEAALHAVAASGSLALTIFRPSVVFGPGDAFLNTFATLQRTLPVL 180
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
PL R QPV+V DV A L D S GK YELGGP ++T+ L +
Sbjct: 181 PL-AMPDARFQPVFVGDVVQAFVNTL-DLAASHGKTYELGGPTVYTLEALVRYCGTLVGR 238
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
V++P +A+ L +V LP + D + + + ++S +L
Sbjct: 239 QARIVRLPDALAR--------LQARVFECLPGEPVITRDNLASMSVPNVLSGP--LAPEL 288
Query: 303 GIVPHKLKGYPTEYL 317
GI P L+ YL
Sbjct: 289 GISPASLESIAPAYL 303
>gi|379006114|ref|YP_005255565.1| NAD-dependent epimerase/dehydratase [Sulfobacillus acidophilus DSM
10332]
gi|361052376|gb|AEW03893.1| NAD-dependent epimerase/dehydratase [Sulfobacillus acidophilus DSM
10332]
Length = 285
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 124/276 (44%), Gaps = 20/276 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TG++G + A+ G QV V R + + + + + N +
Sbjct: 5 ILGGTGYVGAAIRAAYAQKGHQVTVVARHPARE---------ISGVTVVSLDVLTGN-LT 54
Query: 72 ATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
++ +VV+N IG RE +FE ++ + ER+ A G+ R + IS LG
Sbjct: 55 GILSGMDVVVNAIGIIREQPQAGITFEAMHVTLVERLLE-AIAAVGVSRLLHISALGTRP 113
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
+ SR TK AEE + + TI RP+ + G AQ + PL G G
Sbjct: 114 GAVSRYHQTKWRAEERIRQANARWTIFRPSLVFGGRAPFFELLAQLTR-LPIAPLPGSGQ 172
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY-VK 248
T QPVY D+A + + +DD T++G+ YELGGP +T+ EL + + R +P
Sbjct: 173 TLFQPVYRHDIARFLVSVTEDD-TTVGQTYELGGPKRYTLTELYDAVARKARRHPTAKFS 231
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN 284
+P V VA L + +P P+ L L E N
Sbjct: 232 IPLSVMGVVAS----LSRWIPVPITPDQLTMLMEPN 263
>gi|339626661|ref|YP_004718304.1| NAD-dependent epimerase/dehydratase [Sulfobacillus acidophilus TPY]
gi|339284450|gb|AEJ38561.1| NAD-dependent epimerase/dehydratase [Sulfobacillus acidophilus TPY]
Length = 296
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 124/276 (44%), Gaps = 20/276 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TG++G + A+ G QV V R + + + + + N +
Sbjct: 16 ILGGTGYVGAAIRAAYAQKGHQVTVVARHPARE---------ISGVTVVSLDVLTGN-LT 65
Query: 72 ATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
++ +VV+N IG RE +FE ++ + ER+ A G+ R + IS LG
Sbjct: 66 GILSGMDVVVNAIGIIREQPQAGITFEAMHVTLVERLLE-AIAAVGVSRLLHISALGTRP 124
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
+ SR TK AEE + + TI RP+ + G AQ + PL G G
Sbjct: 125 GAVSRYHQTKWRAEERIRQANARWTIFRPSLVFGGRAPFFELLAQLTR-LPIAPLPGSGQ 183
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY-VK 248
T QPVY D+A + + +DD T++G+ YELGGP +T+ EL + + R +P
Sbjct: 184 TLFQPVYRHDIARFLVSVTEDD-TTVGQTYELGGPKRYTLTELYDAVARKARRHPTAKFS 242
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN 284
+P V VA L + +P P+ L L E N
Sbjct: 243 IPLSVMGVVAS----LSRWIPVPITPDQLTMLMEPN 274
>gi|145590176|ref|YP_001156773.1| NAD-dependent epimerase/dehydratase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145048582|gb|ABP35209.1| NAD-dependent epimerase/dehydratase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 302
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 24/294 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G GF+GR + QL G VL+P R L+L L ++ + D + ++
Sbjct: 7 LIGGNGFVGRVIAAQLQAAGYSVLIPTSHVVAG-RELRL---LPKVHLEDADVHDFDELQ 62
Query: 72 ATMAKANV---VINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+ + VINL+G +E + F+ + + + I + HG + R++ +S
Sbjct: 63 NLCGRIQLRGAVINLVGVLHDKEAQPYGKVFKAAHVDLPKNIITAMQLHG-LKRYLHMSA 121
Query: 125 LGASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
LGA+S PS +K E AV L W TI RP+ + G +D+ +N +++ K F P
Sbjct: 122 LGANSQGPSMYQRSKGDGELAVKASSLDW-TIFRPSVIFGAQDQFINLFSKLTKLFPALP 180
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L + + QPV V DVA+A AL T + ++Y+L GP ++++ E+ EL +
Sbjct: 181 L-ANYQAQFQPVSVDDVASAFVGALTMPQT-IHQVYDLVGPTVYSMKEIVELAARKVHTK 238
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297
+ VP V A+ E LP P L + D I + ++ NA+
Sbjct: 239 CVIIPVPAFVGYLQALAFEF--------LPGPTLMSRDNIASMQVPNVLPVNAV 284
>gi|389775813|ref|ZP_10193678.1| putative nucleoside-diphosphate sugar epimerase [Rhodanobacter
spathiphylli B39]
gi|388437054|gb|EIL93880.1| putative nucleoside-diphosphate sugar epimerase [Rhodanobacter
spathiphylli B39]
Length = 312
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 141/302 (46%), Gaps = 24/302 (7%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TGF+G+ +V +LA G ++++ R D RH + + L + + DD +
Sbjct: 7 VILGGTGFVGQQLVPRLAADGHRIVLLSR---DRERH-RALAVLPGVSVRNADIYDDAVL 62
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEH-GGIMRFIQISCLGASS 129
+ +A A+ INL+G + +SF+ + + R+ IA H G+ R Q+S L A
Sbjct: 63 RRQLAGADAAINLVGILNQGGRHSFQRTHVELTRRL--IAACHDSGVGRLHQMSSLKAGQ 120
Query: 130 SSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S+ T+ AE V L W TI +P+ + G D L++++A ++ PL
Sbjct: 121 GL-SQYLKTRGEAEALVRTSALDW-TIYQPSVIFGRGDGLVSRFAALLRNMPALPL-ARA 177
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+R+ P +V DVA A+ + + +EL GPD+ ++ E+ + D + +
Sbjct: 178 QSRLAPTWVGDVAEAIARCVNHERLGRQCSFELYGPDVLSLGEIVRCIRDAAGLHTPIIA 237
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+P + + A E+L PG F+LD + +D++ + + LGI P
Sbjct: 238 LPDSLGQLQAQFAELL----------PGKPFSLDNFRSLRTDSVGKVDG--YAILGITPQ 285
Query: 308 KL 309
L
Sbjct: 286 PL 287
>gi|448384689|ref|ZP_21563424.1| NAD-dependent epimerase/dehydratase [Haloterrigena thermotolerans
DSM 11522]
gi|445657693|gb|ELZ10517.1| NAD-dependent epimerase/dehydratase [Haloterrigena thermotolerans
DSM 11522]
Length = 306
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 32/298 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKL-MGDLGQIVPMKFNPRDDN 68
V G TGF+G + +LA+ G +V R + P +++ +GD+ +
Sbjct: 5 VAGGTGFIGTNLCAELAERGHEVTALSRSPDGGGLPDGVEVAIGDVSAY----------D 54
Query: 69 TIKATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I T+A + V+NL+ ++ R + H A E G I RF+Q+S LG
Sbjct: 55 SIVDTVAGHDAVVNLVALSPLFKPRGGKSHETVHLGGTENLVRAAEAGDIDRFLQLSALG 114
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFP 183
A + TK AE V +TI+RP+ + G ++ F K
Sbjct: 115 ADPDGATAYIRTKGKAEAVVRSSALESTIVRPSVVFGDG----GEFVDFTKALTTPYVTG 170
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G G TR QP++V D+ + AL+D+ G+ Y+L GP++ T+ ++ EL Y +
Sbjct: 171 LPGGGKTRFQPIWVGDLVPMLADALEDE-AHAGETYDLAGPEVLTLADVTELAYAAEGKD 229
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
V +P +AK V + + VPF LP F D+ + D V+DN +T D
Sbjct: 230 ITIVPIPMGLAK-VGLSA---IGPVPF-LP----FGPDQARSLAFDNTVTDNDVTAFD 278
>gi|402226366|gb|EJU06426.1| NADP-binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 336
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 10/195 (5%)
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+T+ A++V++L+G T FE V H +A A++ G + +Q S +GA
Sbjct: 71 STLLPAFEGADIVVSLVGLLNATPE-QFERVQHQGTRNVALAARDVGA--KVVQFSAIGA 127
Query: 128 SSSSPSRVFSTKAAAEEAVLREL-PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
SP + TKA E AV L AT +RP+ + G D ++A+ F P+FG
Sbjct: 128 DVRSPVPYWRTKALGEAAVKGILGDGATSIRPSLVFGPGDGFFARFAKLAGVLPFLPVFG 187
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDD------GTSMGKIYELGGPDIFTVHELAELMYDTI 240
G+TR QPV+ D+A AV + D G ++ GGPDIFT EL +L+ +
Sbjct: 188 GGTTRFQPVFAGDIAQAVEICTRRDIDKEVEKAVAGTTFDAGGPDIFTYKELMQLVLEYD 247
Query: 241 REYPHYVKVPFPVAK 255
+ + +P+ + K
Sbjct: 248 HKSRPIISLPYELGK 262
>gi|171056801|ref|YP_001789150.1| NADH dehydrogenase [Leptothrix cholodnii SP-6]
gi|170774246|gb|ACB32385.1| NADH dehydrogenase [Leptothrix cholodnii SP-6]
Length = 321
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 111/235 (47%), Gaps = 20/235 (8%)
Query: 12 VFGTTGFLGRYVVQQL----AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
V G TGF+GR G+ + +P R P K + L + ++ + D
Sbjct: 6 VLGGTGFVGRAFAAAWVAAHGGTGAGLRIPSR----RPARAKALAMLPTVELVEADVHDP 61
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG- 126
+ A MA + V+NL+ FE V+ + +RIAG A G+ R + +S LG
Sbjct: 62 AQLLALMAGCDAVVNLVA-VLHGDARRFEQVHVTLPQRIAG-ACAAAGVTRLVHVSALGV 119
Query: 127 ----ASSSSPSRVFSTKAAAEEAVLRELPWA--TIMRPAAMIGTEDRLLNKWAQFVKKFN 180
+ +PS +K E+ VLR P T++RP+ + G EDR +N +A
Sbjct: 120 DDAADAPPAPSLYLRSKTQGEQ-VLRAAPGLALTLLRPSVIFGAEDRFINLFAALQALAP 178
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
PL G + R QPV+V DVA A+ A L D +G+ +E GP + T+ EL +L
Sbjct: 179 VMPLAG-AAARFQPVWVDDVAHAIVACLTDP-RHIGRTFECAGPQVLTLRELVQL 231
>gi|448344601|ref|ZP_21533507.1| NAD-dependent epimerase/dehydratase [Natrinema altunense JCM 12890]
gi|445638073|gb|ELY91219.1| NAD-dependent epimerase/dehydratase [Natrinema altunense JCM 12890]
Length = 306
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 132/294 (44%), Gaps = 30/294 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G +GF+G + +L + G V R +D + +G I + +I
Sbjct: 5 VAGGSGFIGTTLCAELVERGHAVTALSRSPDDAGLPDGVASAVGDISAYE-------SIA 57
Query: 72 ATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
T+A + V+NL+ YE R + H A + GG+ RF+Q+S LGA
Sbjct: 58 DTVADHDAVVNLVSLSPLYEPRGGPSHEAVHLGGTENLVRAADAGGVSRFLQMSALGADP 117
Query: 130 SSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFPL 184
+ + K AE AV+R L W TI+RP+ + G ++ +F K L
Sbjct: 118 NGDTAYIRAKGRAE-AVVRGSGLEW-TIVRPSVVFGDG----GEFVEFTKTLTTPYVTGL 171
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G TR QP++V D+ + L+DD +G+ YEL GP I T+ ++ +L+Y +
Sbjct: 172 PGGGKTRFQPIWVGDLVPMLADVLEDD-AHVGETYELAGPQITTLADVTKLVYAAEGKAV 230
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
V +P +AK V + L VP F D+ + D V+DN +T
Sbjct: 231 TIVPIPMGLAK-VGLSAVDSLPFVP--------FGPDQARSLEFDNTVADNDVT 275
>gi|73749008|ref|YP_308247.1| hypothetical protein cbdb_A1269 [Dehalococcoides sp. CBDB1]
gi|73660724|emb|CAI83331.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1]
Length = 302
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 141/300 (47%), Gaps = 20/300 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD-NTI 70
V G +GF+GR+++ +LA+ G ++ + E + +K G V + +D +
Sbjct: 7 VTGGSGFVGRHLLPRLAENGFKIRL-LVMNETEANRVKTPG-----VEFVYGTVNDLPVL 60
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
++ +I+L+ E +N +F +VN + I A E+G + RFI + LGAS+
Sbjct: 61 MDSLKDVFAIIHLVAILRENKNATFAEVNIEGTKNILAAATENG-VKRFIHMGILGASAD 119
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF-PLFGDGS 189
+K AEEAV +I++P+ M G +N + K + F P+ G+G
Sbjct: 120 PRFTYLHSKYLAEEAVRHSGLGYSILKPSVMFGPGAGFINALIRSFKPYPFIAPVAGNGK 179
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
TR+QP++V DV + + L +G + + ++GGP IFT ++ + +R + V
Sbjct: 180 TRLQPIWVEDVVSCLLKML--EGEKIHQSVQIGGPQIFTYDQVLSAVMQAMRIKKPRLHV 237
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
P + + + E P +P E+ A + D I ++A+ ++ G P L
Sbjct: 238 PVGLMRPLVWLMERASSNPPITMP--------ELKALSVDNITVEDAVK-REFGFDPKPL 288
>gi|372487369|ref|YP_005026934.1| putative nucleoside-diphosphate sugar epimerase [Dechlorosoma
suillum PS]
gi|359353922|gb|AEV25093.1| putative nucleoside-diphosphate sugar epimerase [Dechlorosoma
suillum PS]
Length = 319
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 131/294 (44%), Gaps = 23/294 (7%)
Query: 12 VFGTTGFLGRYVVQQL-AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+G ++ L A+ G ++ VP R E L L G +V N +D +
Sbjct: 8 LLGGSGFVGSHIANLLSAREGIRITVPSRRRERAKHLLPLPGV--DVVEANINKEED--L 63
Query: 71 KATMAKANVVINLIGREYETRNYSFED---VNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
A M + VINL+G + + H R A + G+ R + +S L A
Sbjct: 64 LALMRGQDAVINLVGILHGDSEMPYGRKFAQAHVELPRKVVAAMQQAGVKRLVHMSALKA 123
Query: 128 SSSSPSRVFSTKAAAEEAVLR-ELPW-ATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
+ PS +K E VL + P T+ RP+ + G D LN +A+ +K FP+
Sbjct: 124 DTKGPSEYLRSKGDGEAIVLAAQGPLDVTVFRPSVIFGAGDSFLNTFAKLLKLAPVFPI- 182
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYP 244
G R QPV + DV A +L+D T G+ YEL GP ++++ EL + I +E P
Sbjct: 183 GFPDARFQPVCIDDVGQAFVDSLEDSDT-FGQTYELCGPGVYSLRELIQYTGKVIGKERP 241
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
F +++ A + LL P PL P D + + D + + A T
Sbjct: 242 L-----FKLSEGWAYLQAGLLWLAPKPLMSP-----DNLRSMQVDNVATPGAKT 285
>gi|170734385|ref|YP_001766332.1| NADH dehydrogenase [Burkholderia cenocepacia MC0-3]
gi|169817627|gb|ACA92210.1| NADH dehydrogenase [Burkholderia cenocepacia MC0-3]
Length = 319
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 132/314 (42%), Gaps = 26/314 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+G +V L G V + R D RHL+++ + ++ + D T+
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKHVRIGTR-RRDHARHLQML----PVDIVELDALDTRTLA 62
Query: 72 ATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+A A+ INLIG + R FE + + +A E G + R + +S LGA
Sbjct: 63 RFVAGAHAAINLIGVLHGGRGTPYGPGFERAHVALPAALATACSEVG-VRRLLHMSALGA 121
Query: 128 SSSSPSRVFSTKAAAEEAV----LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
S S +K E A+ + TI RP+ + G D LN +A + P
Sbjct: 122 DSHGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDAFLNTFANLQRTVPVLP 181
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L R QPV+V DV A L G + GK YELGGP ++T+ +L +
Sbjct: 182 L-AMPDARFQPVFVGDVVRAFVNTLDLTG-AHGKTYELGGPTVYTLEQLVRYCGTLVGRQ 239
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
V++P +A+ A E LP + D + + ++S +LG
Sbjct: 240 ARIVRLPDALARLQASVFEC--------LPGEPVLTRDNLATMSVPNVLSGP--LAPELG 289
Query: 304 IVPHKLKGYPTEYL 317
I P L+ YL
Sbjct: 290 ISPASLESIAPAYL 303
>gi|421747537|ref|ZP_16185236.1| putative NAD-dependent epimerase/dehydratase [Cupriavidus necator
HPC(L)]
gi|409773834|gb|EKN55556.1| putative NAD-dependent epimerase/dehydratase [Cupriavidus necator
HPC(L)]
Length = 340
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 147/334 (44%), Gaps = 37/334 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGC------------------EDDPRHLKLMGD 53
V G +GF+G ++V +L+ + ++ P ED+ R L +
Sbjct: 8 VIGGSGFIGSHLVARLSGVANRSNAPLEHATVVIPPMDPERIVVATRNEDNARDLLALPR 67
Query: 54 LGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFED---VNHFMAERIAGIA 110
+ V + ++ ++ +V+NL+G + R + H R +
Sbjct: 68 VEIAVLDVADEAALDSAIGSLGIEGIVVNLVGVLHGGRGDPYGAGFAAAHVELPRRLIES 127
Query: 111 KEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRL 168
G+ R + +S LGA S+ PS +K E AV RE L W TI RP+ + G +D
Sbjct: 128 MRRTGVRRLLHMSALGADSAGPSMYLRSKGDGERAV-RESGLDW-TIFRPSVVFGPDDHF 185
Query: 169 LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFT 228
LN +A + PL R QPV+V DVA A+ A+ T +G+ YELGGP ++T
Sbjct: 186 LNLFASMQRLAPVVPL-ACAQARFQPVFVQDVAQAMVNAMATPAT-IGRCYELGGPQVYT 243
Query: 229 VHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS 288
+ EL + +P V P+ A+A + +L+ +P + + D +++
Sbjct: 244 LEELVRFAGEA-SGHPRPV---LPLPDALARLQAAVLEH----MPGGPVMSRDNLDSMRL 295
Query: 289 DTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRK 322
D ++S +LG+ P L+ TE L R+
Sbjct: 296 DNVLSGP--MAPELGVHPTSLEAVMTEALSGGRE 327
>gi|374621782|ref|ZP_09694312.1| NAD-dependent epimerase/dehydratase [Ectothiorhodospira sp. PHS-1]
gi|373940913|gb|EHQ51458.1| NAD-dependent epimerase/dehydratase [Ectothiorhodospira sp. PHS-1]
Length = 312
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 29/291 (9%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP----MKFNPRD 66
V G TGF+G +VV +LA G QV V R RH L+ +VP ++ + D
Sbjct: 7 CVLGGTGFVGTHVVARLAGGGRQVKVITRHVS---RHRHLL-----VVPGVRLVEADCHD 58
Query: 67 DNTIKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
++ + + VINL+G E F + +A ++ A+E G+ R + +S
Sbjct: 59 PRVLRQHFSDCDGVINLVGILNERGRDGSGFRHAHVDLARKVIECARE-AGVKRLLHMSA 117
Query: 125 LGA-SSSSPSRVFSTKAAAEEAV--LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF 181
L A ++S PS TK AE V + T RP+ + G D N++A ++
Sbjct: 118 LNADAASGPSHYLRTKGEAENIVHTMAGNVRVTSFRPSVIFGPTDSFFNRFAGLLRLSPV 177
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
PL R PVYV DVA AL+D GT G+ EL GP ++T+ EL +
Sbjct: 178 LPLACP-DARFAPVYVGDVAQHFVDALEDRGT-WGQRIELCGPSVYTLKELVSYTAQVMA 235
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIV 292
++ +++ +++ + +++ VP +P F+LD ++ + D++
Sbjct: 236 RR----RLILGLSEGLSLWQARIMEYVP---GKP--FSLDNYHSMSRDSVC 277
>gi|448343044|ref|ZP_21531986.1| NAD-dependent epimerase/dehydratase [Natrinema gari JCM 14663]
gi|445624104|gb|ELY77493.1| NAD-dependent epimerase/dehydratase [Natrinema gari JCM 14663]
Length = 306
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 133/294 (45%), Gaps = 30/294 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G +GF+G + +L + G V R +D G + P + +I
Sbjct: 5 VAGGSGFIGTTLCAELVERGHAVTALSRSPDD-------AGLPDGVAPAIGDVSAYESIA 57
Query: 72 ATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
T+A + V+NL+ Y+ R + +H A + GG+ RF+Q+S LGA
Sbjct: 58 DTVAGHDAVVNLVSLSPLYDPRGGPSHEESHLGGTENLVRAADAGGVSRFLQMSALGADP 117
Query: 130 SSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFPL 184
+ + K A EAV+RE L W TI+RP+ + G ++ F K L
Sbjct: 118 NGDTAYIRAKGRA-EAVVRESDLEW-TIVRPSVVFGDG----GEFVAFTKTLTTPYVTGL 171
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G TR QP++V D+ + AL+DD +G+ Y+L GP I T+ ++ +L+Y +
Sbjct: 172 PGGGKTRFQPIWVGDLVPMLADALEDD-AHVGETYDLAGPQITTLADVTKLVYAAEGKDV 230
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
V +P +AK + + L VP F D+ + D V+DN +T
Sbjct: 231 TIVPIPMGLAK-IGLAAVDSLPFVP--------FGPDQARSLEFDNTVADNDVT 275
>gi|386334926|ref|YP_006031097.1| nadh-ubiquinone oxidoreductase protein [Ralstonia solanacearum
Po82]
gi|334197376|gb|AEG70561.1| nadh-ubiquinone oxidoreductase protein [Ralstonia solanacearum
Po82]
Length = 334
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 135/297 (45%), Gaps = 33/297 (11%)
Query: 12 VFGTTGFLGR-----YVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
V G TGF+G V + A G +V+VP R E H + L ++ M+ +
Sbjct: 8 VLGGTGFIGTRLLSCLVTETFATPGLPDGRVIVPTRDAESAQAHNLTL--LPRVDVMEAD 65
Query: 64 PRDDNTIKATM-------AKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKE 112
D+ + A + VINL+G + R +F + + R+ +
Sbjct: 66 VHADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRRAHVDLPRRVVDACRR 125
Query: 113 HGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNK 171
HG + R + +S LGA + PS +K E V +L W T+ RP+ + G +D LN
Sbjct: 126 HG-VKRLLHMSALGADPAGPSMYQRSKGDGERVVTGSDLDW-TVFRPSVVFGPDDHFLNL 183
Query: 172 WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+A+ + F PL R QPVYV DVA A AL D+ + ++Y L GP ++T+ E
Sbjct: 184 FARMQRLAPFVPL-ACAEARFQPVYVDDVATAFAHAL-DNPATFRRVYPLVGPRVYTLAE 241
Query: 232 LAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGL--FNLDEINA 285
L T +P ++ P++ V + L +++P PL R L +D I+A
Sbjct: 242 LVRFA-GTASGHPRWI---VPLSDTVGRLQATLFEQLPGSPLSRDNLDSMRIDNISA 294
>gi|448622690|ref|ZP_21669365.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax
denitrificans ATCC 35960]
gi|445754049|gb|EMA05463.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax
denitrificans ATCC 35960]
Length = 301
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFR--GCEDDPRHL-KLMGDLGQIVPMKFNPRDDN 68
V G +GF+G ++ ++L G V R ED P + K MGD+ D +
Sbjct: 5 VVGGSGFIGSHLCRELQSRGHSVTAMSRSPNSEDLPDGVEKAMGDV----------TDYD 54
Query: 69 TIKATMAKANVVINLIGRE--YETRNYS-FEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+I + V+NL+ +E + D+ H+ A E + R +Q+S L
Sbjct: 55 SIAGAFEGKDAVVNLVALSPLFEPGGGNRMHDIVHWQGTENVVKAAEANDVPRLVQMSAL 114
Query: 126 GASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---- 180
GA + + +K AE AV L W I RP+ + G ++ F K+
Sbjct: 115 GADTDGDTAYIRSKGKAEGAVKSSGLDW-VIFRPSVVFGDG----GEFVSFTKRLKGMFA 169
Query: 181 ----FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+PL G+G TR QP++V D+A + A++ D +G+ Y +GGP+ T+ E+ E++
Sbjct: 170 PGVPLYPLPGNGETRFQPIWVGDLAPMLADAVEGD-EHVGETYRIGGPEKLTLREITEMV 228
Query: 237 YDTIREYPHYVKVPFPVAKA 256
YD E VP P+ A
Sbjct: 229 YDA--ENKSITIVPLPMGLA 246
>gi|384439414|ref|YP_005654138.1| NADH-ubiquinone oxidoreductase 39 kDa subunit/NADH dehydrogenase
[Thermus sp. CCB_US3_UF1]
gi|359290547|gb|AEV16064.1| NADH-ubiquinone oxidoreductase 39 kDa subunit/NADH dehydrogenase
[Thermus sp. CCB_US3_UF1]
Length = 287
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 110/243 (45%), Gaps = 21/243 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+GR++V++L + G LV R D P + L GD+ + P D +
Sbjct: 5 VVGGTGFVGRHLVRRLLQGGHTPLVLARSPRDLPPGAVFLPGDITREAP------DLRGV 58
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+A + A ++ R +F+ V H R + G+ R + +S LGA
Sbjct: 59 EAAIYLAGII--------RERGQTFQQV-HVEGVRNLLMGMRRAGVDRLLHMSALGARRG 109
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ--FVKKFNFFPLFGDG 188
+ SR + TKA EE V TI RP+ + G D + + F PL GDG
Sbjct: 110 TGSRYYETKAQGEELVRESGVSWTIFRPSLIFGPGDEFFGGVLRGLVCQPLPFVPLIGDG 169
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
S +PVYV DVA A AL+ MG ++L GP +T EL E + + ++
Sbjct: 170 SFPFRPVYVGDVAEAFAGALERG--VMGT-WDLVGPREYTFRELLERTMEVLGRRKPFLP 226
Query: 249 VPF 251
+P
Sbjct: 227 IPL 229
>gi|444921160|ref|ZP_21240998.1| Hypothetical protein F387_00800 [Wohlfahrtiimonas chitiniclastica
SH04]
gi|444507896|gb|ELV08070.1| Hypothetical protein F387_00800 [Wohlfahrtiimonas chitiniclastica
SH04]
Length = 317
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 141/309 (45%), Gaps = 32/309 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPF---RGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
V G +G++G +V+ +LA+ + ++ F + ++D R V K P+ D
Sbjct: 6 VLGGSGYVGYHVISRLARDKNNHIIAFSRSKNVQEDTRQFSF-------VKFKTYPQTDA 58
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
I + A+V+INL+G R + + + + +R A +AK+ I FI +S LG S
Sbjct: 59 EILYHIHDADVIINLVGTMDGNRKRATK-AHVDLVKRYAELAKQ-TSIKHFIHMSALGVS 116
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWA----TIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
S F TK E A+ L + +I+RP+ M G L+ + + KF F +
Sbjct: 117 EKGGSVYFDTKWQGEVALKEALNNSGIKVSILRPSFMFGQRAPSLDGLVRLIDKFPMFMV 176
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G T+ QP+YV DV A+ + + M Y L GP+ T E++ D +R Y
Sbjct: 177 PG-AFTQFQPIYVGDVTRAIEQIMCTQ-SEMQATYTLVGPERMT---FLEMIRDVLR-YS 230
Query: 245 HYVKVPFPVAKAVAMPR--EILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
H + KA+AMP+ LL +P+ F +++ N D++ N L + L
Sbjct: 231 HLCR-----KKAIAMPKPFAFLLALTTGWMPKAP-FTMNQYNCLKIDSVSDTNNL--EQL 282
Query: 303 GIVPHKLKG 311
I P +
Sbjct: 283 SISPQSFQS 291
>gi|335436817|ref|ZP_08559607.1| NAD-dependent epimerase/dehydratase [Halorhabdus tiamatea SARL4B]
gi|334897410|gb|EGM35545.1| NAD-dependent epimerase/dehydratase [Halorhabdus tiamatea SARL4B]
Length = 291
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 119/253 (47%), Gaps = 28/253 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G GF+GR++ ++L + G V R + DP L + + + D ++I
Sbjct: 5 VTGGDGFVGRHLCRELDERGHDVAALSR--DPDPTALP-----DGVETVAGDVTDRSSID 57
Query: 72 ATMAKANVVINLIGRE---YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ +V++NL+ T + H A E G+ RF+Q+S LGA
Sbjct: 58 PALEGVDVLVNLVALSPLFIPTGGNEMHERIHLGGTENLVAAAEDEGVERFVQMSALGAD 117
Query: 129 SSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFP 183
+ K AEE V+RE L W I+RP+ + G ++ F KK P
Sbjct: 118 PDGSTHYIRAKGRAEE-VVRESALEW-VIVRPSVIFGDG----GEFVGFTKKLTPPVVAP 171
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G G TR QP++V D+A + ++DD + G++YELGGP+ T+ ++A+L+ +
Sbjct: 172 LPGGGKTRFQPIWVEDLAPMLADCVEDDDRA-GEVYELGGPEQLTLKQIAKLVRGRV--- 227
Query: 244 PHYVKVPFPVAKA 256
VP P+A A
Sbjct: 228 ---AVVPVPMALA 237
>gi|409051861|gb|EKM61337.1| hypothetical protein PHACADRAFT_247878 [Phanerochaete carnosa
HHB-10118-sp]
Length = 174
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 7/169 (4%)
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+T+ + A+VV++L+G + FE V AE +A A + + I IS +GA
Sbjct: 9 DTLGPAVEGADVVVSLVGL-MQGSVEDFERVQWKGAENVAKAAGKA--HAKVIHISAIGA 65
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ +SP TKA E+A+L P ATI+RP+ + G D ++AQ K P+FG
Sbjct: 66 NCNSPVPYARTKALGEDAILDACPDATIIRPSILFGKGDGFFTRFAQLAKILPVMPVFGG 125
Query: 188 GSTRIQPVYVVDVAAAVTA----ALKDDGTSMGKIYELGGPDIFTVHEL 232
G+ R QPV+V DVA A+ ++ + GK E GGP++FT+ L
Sbjct: 126 GTARFQPVFVDDVARAIEILSRREIETNEACDGKTIEAGGPEVFTIVRL 174
>gi|292656333|ref|YP_003536230.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax volcanii
DS2]
gi|291372445|gb|ADE04672.1| nadh dehydrogenase/oxidoreductase-like protein [Haloferax volcanii
DS2]
Length = 301
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 116/260 (44%), Gaps = 33/260 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFR--GCEDDPRHL-KLMGDLGQIVPMKFNPRDDN 68
V G +GF+G ++ ++L G V R ED P + K MGD+ D +
Sbjct: 5 VVGGSGFIGSHLCRELQSRGHSVTAMSRSPNSEDLPDGVEKAMGDV----------TDYD 54
Query: 69 TIKATMAKANVVINLIGRE--YE-TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+I + V+NL+ +E + D+ H+ A E + R +Q+S L
Sbjct: 55 SIAGAFEGKDAVVNLVALSPLFEPSGGNRMHDIVHWQGTENVVKAAEANDVPRLVQMSAL 114
Query: 126 GASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---- 180
GA S + +K AE AV L W I RP+ + G ++ F K+
Sbjct: 115 GADSDGDTAYIRSKGKAEGAVKSSGLDW-VIFRPSVVFGDG----GEFVSFTKRLKGMFA 169
Query: 181 ----FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+PL G+G TR QP++V D+ + A++ D G+ Y +GGP+ T+ E+ E++
Sbjct: 170 PGVPLYPLPGNGETRFQPIWVGDLVPMLADAVEGD-DHAGETYRIGGPEKLTLREITEMV 228
Query: 237 YDTIREYPHYVKVPFPVAKA 256
YD E VP P+ A
Sbjct: 229 YDA--ENKSITIVPLPMGLA 246
>gi|289433003|ref|YP_003462876.1| NAD-dependent epimerase/dehydratase [Dehalococcoides sp. GT]
gi|452205490|ref|YP_007485619.1| NAD-dependent epimerase/dehydratase [Dehalococcoides mccartyi
BTF08]
gi|288946723|gb|ADC74420.1| NAD-dependent epimerase/dehydratase [Dehalococcoides sp. GT]
gi|452112546|gb|AGG08277.1| NAD-dependent epimerase/dehydratase [Dehalococcoides mccartyi
BTF08]
Length = 302
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 141/300 (47%), Gaps = 20/300 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD-NTI 70
V G +GF+GR+++ +LA+ G ++ + E + +K G V + +D +
Sbjct: 7 VTGGSGFVGRHLLPRLAENGFKIRL-LVMNETEANRVKTPG-----VEFVYGTVNDLPVL 60
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
++ VI+L+ E +N +F +VN + + A E+G + RFI + LGAS+
Sbjct: 61 MDSLKDVFAVIHLVAILRENKNATFAEVNIEGTKNMLAAATENG-VKRFIHMGILGASAD 119
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF-PLFGDGS 189
+K AEEAV +I++P+ M G +N + K + F P+ G+G
Sbjct: 120 PRFTYLHSKYLAEEAVRHSGLGYSILKPSVMFGPGAGFINALIRSFKPYPFIAPVAGNGK 179
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
TR+QP++V DV + + L +G + + ++GGP IFT ++ + +R + V
Sbjct: 180 TRLQPIWVEDVVSCLLKIL--EGEKIHQSVQIGGPQIFTYDQVLSAVMQAMRIKKPRLHV 237
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
P + + + E P +P E+ A + D I ++A+ ++ G P L
Sbjct: 238 PVGLMRPLVWLMERASSNPPITMP--------ELKALSVDNITVEDAVK-REFGFDPKPL 288
>gi|352080452|ref|ZP_08951391.1| NAD-dependent epimerase/dehydratase [Rhodanobacter sp. 2APBS1]
gi|389796968|ref|ZP_10200014.1| putative nucleoside-diphosphate sugar epimerase [Rhodanobacter sp.
116-2]
gi|351683733|gb|EHA66809.1| NAD-dependent epimerase/dehydratase [Rhodanobacter sp. 2APBS1]
gi|388448061|gb|EIM04052.1| putative nucleoside-diphosphate sugar epimerase [Rhodanobacter sp.
116-2]
Length = 312
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 142/300 (47%), Gaps = 24/300 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TGF+G +V +LA G ++++ R E + +G L + + DD+ +
Sbjct: 7 VILGGTGFVGSRLVPRLAADGHRIVLLSRNREQH----RELGVLPTVSVRNADIHDDDVL 62
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASS 129
+ +A A+ VINL+G F+ V+ +A R+ IA H G+ R Q+S L A
Sbjct: 63 RRQLAGADAVINLVGILNPHGRDGFQRVHVELARRL--IAACHASGVGRLHQMSSLKAGQ 120
Query: 130 SSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
S+ ++ AE V L W TI +P+ + G D L++++A+ +++ PL
Sbjct: 121 GL-SQYLKSRGEAEALVKASALDW-TIYQPSVIFGPGDGLVSRFAKLLRQMPVLPL-ARA 177
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
R+ P +V DVA A+ + + +EL GP++ T+ E+ +R+
Sbjct: 178 KARMAPTWVGDVAEAIARCVDHAKLGQRRSFELYGPEVLTLGEI-------VRKIRAAAG 230
Query: 249 VPFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
+ PV VA+P + + F PG F+LD + +D++ + + LGIVP
Sbjct: 231 LRTPV---VALPDSLGRLQAQFAELLPGKPFSLDNFRSLRTDSVGKVDG--YAALGIVPQ 285
>gi|161526197|ref|YP_001581209.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans ATCC
17616]
gi|189349087|ref|YP_001944715.1| NADH dehydrogenase [Burkholderia multivorans ATCC 17616]
gi|221215559|ref|ZP_03588522.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans CGD1]
gi|160343626|gb|ABX16712.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans ATCC
17616]
gi|189333109|dbj|BAG42179.1| NADH dehydrogenase [Burkholderia multivorans ATCC 17616]
gi|221164547|gb|EED97030.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans CGD1]
Length = 319
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 137/319 (42%), Gaps = 26/319 (8%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G + G TGF+G +V L G V + R E RHL ++ + ++ D
Sbjct: 3 GQTVALLGGTGFIGSRLVAALIDAGKHVRIGTRRREHA-RHLSML----PVDIVELETFD 57
Query: 67 DNTIKATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
++ +A A +NL+G + R FE + + +A E G+ R + +
Sbjct: 58 TRSLARFVAGAQAAVNLVGVLHGGRGTPYGAGFERAHVALPAALARACVE-AGVRRVLHM 116
Query: 123 SCLGASSSSPSRVFSTKA---AAEEAVLRELPWA-TIMRPAAMIGTEDRLLNKWAQFVKK 178
S LGA S PS +K AA A+ P A TI RP+ + G D LN +A+ +
Sbjct: 117 SALGADSHGPSMYQRSKGDGEAALHAIAATEPLAVTIFRPSVVFGPGDAFLNTFARLQRI 176
Query: 179 FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD 238
PL R QPV+V DV A L+ + G+ YELGGP ++T+ +L
Sbjct: 177 APVLPL-AMPDARFQPVFVGDVVRAFVNTLELS-AAHGRTYELGGPTVYTLEQLVRYCGT 234
Query: 239 TIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
+ V++P +A+ L +V LP + D + + + ++S
Sbjct: 235 LVGRQARIVRLPDALAR--------LQARVFECLPGEPVITRDNLASMSVPNVLSGP--L 284
Query: 299 FQDLGIVPHKLKGYPTEYL 317
+LGIVP L+ YL
Sbjct: 285 APELGIVPASLESIAPAYL 303
>gi|254246955|ref|ZP_04940276.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
gi|124871731|gb|EAY63447.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
Length = 319
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 133/314 (42%), Gaps = 26/314 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+G +V L G V + R D RHL+++ + ++ + D T+
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKHVRIGTR-RRDHARHLQML----PVDIVELDALDTRTLA 62
Query: 72 ATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+A A+ INL+G + R FE + + +A E G + R + +S LGA
Sbjct: 63 RFVAGAHAAINLVGVLHGGRGTPYGPGFERAHVALPAALATACSEVG-VRRLLHMSALGA 121
Query: 128 SSSSPSRVFSTKAAAEEA----VLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
S S +K E A V + TI RP+ + G D LN +A + P
Sbjct: 122 DSHGASMYQRSKGDGEAALHAVVATDSLALTIFRPSVVFGPGDAFLNTFANLQRTVPVLP 181
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L R QPV+V DV A L G + GK YELGGP ++T+ +L +
Sbjct: 182 L-AMPDARFQPVFVGDVVRAFVNTLDLVG-AHGKTYELGGPTVYTLEQLVRYCGTLVGRQ 239
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
V++P +A+ L +V LP + D + + ++S +LG
Sbjct: 240 ARIVRLPDALAR--------LQARVFECLPGEPVLTRDNLATMSVPNVLSGP--LAPELG 289
Query: 304 IVPHKLKGYPTEYL 317
+ P L+ YL
Sbjct: 290 LSPASLESIAPAYL 303
>gi|257052375|ref|YP_003130208.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM
12940]
gi|256691138|gb|ACV11475.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM
12940]
Length = 291
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 122/254 (48%), Gaps = 30/254 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G GF+GR++ +L + G V R + DP L + + + D ++I+
Sbjct: 5 VTGGDGFVGRHLCAELDERGHDVTALSR--DPDPTVLP-----DGVETVAGDVTDRSSIE 57
Query: 72 ATMAKANVVINLIGREY----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ +V++NL+ N E ++ E + A++ G + RF+Q+S LGA
Sbjct: 58 PAVEGVDVLVNLVALSPLFIPSGGNEMHERIHLGGTENLVAAAEDEG-VERFVQMSALGA 116
Query: 128 SSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FF 182
P+ K AEE V+RE L W I+RP+ + G ++ F KK
Sbjct: 117 DPEGPTHYIRAKGRAEE-VVRESALKW-VIVRPSVIFGDG----GEFVGFTKKLTPPLVA 170
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
PL G G TR QP++V D+A + ++DD G+ YELGGP+ T+ ++A+L+ +
Sbjct: 171 PLPGGGKTRFQPIWVEDLAPMLADCVEDD-ERAGETYELGGPERLTLKQIAKLVRGKV-- 227
Query: 243 YPHYVKVPFPVAKA 256
VP P+A A
Sbjct: 228 ----AVVPVPMALA 237
>gi|452203991|ref|YP_007484124.1| NAD-dependent epimerase/dehydratase [Dehalococcoides mccartyi
DCMB5]
gi|452111050|gb|AGG06782.1| NAD-dependent epimerase/dehydratase [Dehalococcoides mccartyi
DCMB5]
Length = 302
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 141/300 (47%), Gaps = 20/300 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD-NTI 70
V G +GF+GR+++ +LA+ G ++ + E + +K G V + +D +
Sbjct: 7 VTGGSGFVGRHLLPRLAENGFKIRL-LVMNETEANRVKTPG-----VEFVYGTVNDLPVL 60
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
++ +I+L+ E +N +F +VN + + A E+G + RFI + LGAS+
Sbjct: 61 MDSLKDVFAIIHLVAILRENKNATFAEVNIEGTKNMLAAATENG-VKRFIHMGILGASAD 119
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF-PLFGDGS 189
+K AEEAV +I++P+ M G +N + K + F P+ G+G
Sbjct: 120 PRFTYLHSKYLAEEAVRHSGLGYSILKPSVMFGPGAGFINALIRSFKPYPFIAPVAGNGK 179
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
TR+QP++V DV + + L +G + + ++GGP IFT ++ + +R + V
Sbjct: 180 TRLQPIWVEDVVSCLLKML--EGEKIHQSVQIGGPQIFTYDQVLSAVMQAMRIKKPRLHV 237
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
P + + + E P +P E+ A + D I ++A+ ++ G P L
Sbjct: 238 PVGLMRPLVWLMERASSNPPITMP--------ELKALSVDNITVEDAVK-KEFGFDPKPL 288
>gi|148262267|ref|YP_001228973.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
gi|146395767|gb|ABQ24400.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
Length = 296
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 23/248 (9%)
Query: 14 GTTGFLGRYVVQQLAKMGSQV--LVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
G TGF+G ++ + L + G ++ L RG + + GD+ + +T
Sbjct: 7 GGTGFVGGHLRRALLEKGHRIRLLAHKRGDGFEDGIEVVEGDVTR----------PDTFA 56
Query: 72 ATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
+A INL+G RE+ + +FE + A R A + GI R++ +S LG
Sbjct: 57 GQLAGCEAAINLVGIIREFPAQGITFEKL-LVQATRNMVDAAKGAGIKRYLHMSALGTRP 115
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
++ S +K AEE V TI RP+ + G +D +NK A ++K + P+ GDG
Sbjct: 116 NATSAYHRSKFLAEEYVRASGLDYTIFRPSIIFGPKDDFINKLAGYIKGYPAVPVIGDGK 175
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY---PHY 246
R+QP+ DVA +L+ T +GK YE+ G D T +E M DTI H
Sbjct: 176 YRLQPIAADDVARCFAMSLEMPET-VGKTYEICGIDRLTYNE----MLDTIGRVLGKSHV 230
Query: 247 VKVPFPVA 254
K+P P+
Sbjct: 231 AKIPNPLG 238
>gi|386857545|ref|YP_006261722.1| NAD-dependent epimerase/dehydratase [Deinococcus gobiensis I-0]
gi|380001074|gb|AFD26264.1| NAD-dependent epimerase/dehydratase [Deinococcus gobiensis I-0]
Length = 289
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 124/262 (47%), Gaps = 22/262 (8%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD-NTIKA 72
G +GF+GR VV +L + G V R E +G +K + D + ++A
Sbjct: 3 GASGFVGRAVVAELLRQGHTVFAGSRRGEA----------VGGAQGVKLDVTDAASALRA 52
Query: 73 TM-AKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
A+ + V++L+G +T++ +F+ H R A G R++ +S LGA +S
Sbjct: 53 VQQAEPDAVVHLVGIIAQTKDQTFQ-AAHVEGTRHMLAATPRGA--RYLHMSALGADPAS 109
Query: 132 PSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNK-WAQFVKKFNFFPLFGDG 188
SR +TK AE A++R L W TI RP+ + G D + + V P GDG
Sbjct: 110 KSRYSATKGEAE-ALVRSSGLDW-TIFRPSLIFGQGDDFFGRVLKELVTTAPIVPQIGDG 167
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+PV + DVA A AL GT +G+ Y L GP+ FT +L + + ++ V
Sbjct: 168 RFPFRPVSISDVAQAFAGALTRPGT-IGQTYALTGPEEFTFRQLLDEEQRALGQHKPVVP 226
Query: 249 VPFPVAKAVAMPREILLKKVPF 270
VP P+ +A+P L K P
Sbjct: 227 VPLPLMD-LAVPLMGALPKPPI 247
>gi|171317273|ref|ZP_02906470.1| NADH dehydrogenase [Burkholderia ambifaria MEX-5]
gi|171097534|gb|EDT42371.1| NADH dehydrogenase [Burkholderia ambifaria MEX-5]
Length = 319
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 24/313 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+G +V L G QV + R E RHL+++ I ++ + D T+
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKQVRIGTRRREH-ARHLQML----PIEIVELDALDTRTLA 62
Query: 72 ATMAKANVVINLIGREYETRNYSFE---DVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+A A+ INL+G + R+ + + H A G+ R + +S LGA
Sbjct: 63 RFVAGAHAAINLVGVLHGGRDTPYGPGFERAHVALPAALAAACVEVGVRRVLHMSALGAD 122
Query: 129 SSSPSRVFSTKAAAEEAV----LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
S S +K E A+ + TI RP+ + G D LN +A + PL
Sbjct: 123 SHGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDSFLNTFANLQRTLPVLPL 182
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
R QPV+V DV +A L D + GK YELGGP ++T+ +L +
Sbjct: 183 -AMPDARFQPVFVGDVVSAFVNTL-DLTAAYGKTYELGGPTVYTLEQLVRYCGTLVGRQA 240
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
V++P +A+ L +V LP + D + + + ++S +LG+
Sbjct: 241 RIVRLPDALAQ--------LQARVFECLPGEPVITRDNLASMSVPNVLSGP--LAPELGL 290
Query: 305 VPHKLKGYPTEYL 317
P L+ YL
Sbjct: 291 SPASLESVAPAYL 303
>gi|448337932|ref|ZP_21526998.1| NAD-dependent epimerase/dehydratase [Natrinema pallidum DSM 3751]
gi|445624270|gb|ELY77657.1| NAD-dependent epimerase/dehydratase [Natrinema pallidum DSM 3751]
Length = 306
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 130/294 (44%), Gaps = 30/294 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G + +L G QV R D + +G + + +I
Sbjct: 5 VAGGTGFIGTNLCAELVDRGHQVTALSRSPADGELPDGVESAIGDVSAYE-------SIV 57
Query: 72 ATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
T+ + V+NL+ YE R + H A + GG+ RF+Q+S LGA
Sbjct: 58 DTVVDHDAVVNLVSLSPLYEPRGGPGHEAVHVGGTENLVRAADAGGVSRFLQMSALGADP 117
Query: 130 SSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFPL 184
+ + K A EA++RE L W TI+RP+ + G ++ F K L
Sbjct: 118 NGDTAYIRAKGRA-EAMVRESGLEW-TIVRPSVVFGDG----GEFVDFTKTLTTPYVTGL 171
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G TR QP++V D+ + AL+DD +G+ Y+L GP I T+ ++ +L+Y +
Sbjct: 172 PGGGKTRFQPIWVGDLVPMLADALEDD-AHVGETYDLAGPQITTLADVTKLVYAAEGKDV 230
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
V +P +AK V + L VP F D+ + D V DN +T
Sbjct: 231 TIVPIPMRLAK-VGLSAVGSLPFVP--------FGPDQARSLEFDNTVRDNDVT 275
>gi|172061984|ref|YP_001809636.1| NADH dehydrogenase (ubiquinone) [Burkholderia ambifaria MC40-6]
gi|171994501|gb|ACB65420.1| NADH dehydrogenase (ubiquinone) [Burkholderia ambifaria MC40-6]
Length = 319
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 114/260 (43%), Gaps = 14/260 (5%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+G +V L G V + R D RHL+++ + ++ + D T+
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKHVRIGTRR-RDHARHLQML----PVEIVELDALDTRTLA 62
Query: 72 ATMAKANVVINLIGREYETRNYSFE---DVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+A A+ INL+G ++ R + + H A G+ R + +S LGA
Sbjct: 63 RFVAGAHAAINLVGVLHDGRGTPYGPGFERAHVALPAALAAACVEVGVQRVLHMSALGAD 122
Query: 129 SSSPSRVFSTKAAAEEAV----LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
S S +K E A+ + TI RP+ + G D LN +A + PL
Sbjct: 123 SHGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDTFLNTFANLQRTLPVLPL 182
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
R QPV+V DV +A L D + GK YELGGP ++T+ +L +
Sbjct: 183 -AMPDARFQPVFVGDVVSAFVNTL-DLTAAHGKTYELGGPTVYTLEQLVRYCGTLVGRQA 240
Query: 245 HYVKVPFPVAKAVAMPREIL 264
V++P +A+ A E L
Sbjct: 241 RIVRLPDALAQLQACVFECL 260
>gi|288817824|ref|YP_003432171.1| NADH dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|384128585|ref|YP_005511198.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus
TK-6]
gi|288787223|dbj|BAI68970.1| NADH dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|308751422|gb|ADO44905.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus
TK-6]
Length = 313
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 146/316 (46%), Gaps = 20/316 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G+TGF+GRY+V+ L G +V R + R L G+ ++ + N D +I+
Sbjct: 5 ITGSTGFVGRYMVKALLNEGFEVASIVRNLDKLRR---LYGE--KVKGYEGNFEDKASIR 59
Query: 72 ATMA--KANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
K + +I+LIG YE ++ +F V++ ++ + +AKE I + + +S LG
Sbjct: 60 KAFEDFKPDYLIHLIGILYEEKSKGITFHKVHYIYSKNLYQVAKEFD-IKKVLHMSALGT 118
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
++PS TK E+ +++ TI RP+ ++G E RL + L
Sbjct: 119 HKNAPSSYHKTKYQTEQELIKTGLNYTIFRPSIILGPEQRLFFDMWSITRYLRVIALPSG 178
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G QPV V DV A+K + T+ GKIYE+ G + +L E ++ Y +
Sbjct: 179 GHYLFQPVDVRDVVCCFLKAIKSEETN-GKIYEVCGDKKVSFKKLLEDVFS----YWNRK 233
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS-DNALTFQDLGIVP 306
+ P+ KA+ +L++++ P P F+ D++ D I D + Q + V
Sbjct: 234 VLLLPMPKALMYLGGLLIERIMEPPP----FSSDQMLMMWRDNICGLDPEVESQGVQKVC 289
Query: 307 HKLKGYPTEYLIWYRK 322
K E L+W K
Sbjct: 290 QKAPIPYQESLLWSLK 305
>gi|421899610|ref|ZP_16329973.1| nadh-ubiquinone oxidoreductase protein [Ralstonia solanacearum
MolK2]
gi|206590816|emb|CAQ56428.1| nadh-ubiquinone oxidoreductase protein [Ralstonia solanacearum
MolK2]
Length = 334
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 134/297 (45%), Gaps = 33/297 (11%)
Query: 12 VFGTTGFLGR-----YVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
V G TGF+G V + A G +V+VP R E H + L ++ M+ +
Sbjct: 8 VLGGTGFIGTRLLSCLVTETFATPGLPDGRVIVPTRDAESAQAHNLTL--LPRVDVMEAD 65
Query: 64 PRDDNTIKATM-------AKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKE 112
D+ + A + VINL+G + R +F + + R+ +
Sbjct: 66 VHADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRHAHVDLPRRVVDACRR 125
Query: 113 HGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNK 171
HG + R + +S LGA + PS +K E V +L W T+ RP+ + G +D LN
Sbjct: 126 HG-VKRLLHMSALGADPAGPSMYQRSKGDGERIVTGSDLDW-TVFRPSVVFGPDDHFLNL 183
Query: 172 WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+A+ + F PL R QPVYV DVA A AL D+ + +Y L GP ++T+ E
Sbjct: 184 FARMQRLAPFVPL-ACAEARFQPVYVDDVATAFAHAL-DNPATFRHVYPLVGPRVYTLAE 241
Query: 232 LAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGL--FNLDEINA 285
L T +P ++ P++ V + L +++P PL R L +D I+A
Sbjct: 242 LVRFA-GTASGHPRWI---VPLSDTVGRLQATLFEQLPGSPLSRDNLDSMRIDNISA 294
>gi|114319195|ref|YP_740878.1| NAD-dependent epimerase/dehydratase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114225589|gb|ABI55388.1| NAD-dependent epimerase/dehydratase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 320
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 137/317 (43%), Gaps = 21/317 (6%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G +GF+G + +L + G +V+VP R E RHL + ++ ++V + N D++ +
Sbjct: 7 CILGGSGFIGTTIAGRLGRDGHRVIVPTRHRERS-RHLLPVPNV-EVVELNVN--DEDAL 62
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVN--HFMAERIAGIAKEHGGIMRFIQISCLGAS 128
VINL+G E E H R A + G+ R++ +S LGA
Sbjct: 63 VEAFQDCTAVINLVGILNELSGPKGEGFRRAHVELPRRVISACQRAGVGRYLHMSALGAD 122
Query: 129 SSSPSRVFSTKAAAEE---AVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
PS TK E A + T RP+ + G+ D N++A ++ F
Sbjct: 123 PEGPSLYQQTKGEGERLAIAAHGDGLSVTAFRPSVVFGSGDSFFNRFAGLLRLSPGFMFL 182
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
QPV+V DVA+A L+D T G++Y+L GP +T+ L H
Sbjct: 183 PTPHAEFQPVWVNDVASAFIRCLEDQATG-GQVYDLVGPKRYTLEALVRYTARIAGIRRH 241
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
V P++ ++ LL VP +P ++LD + T + DN L LGI
Sbjct: 242 IV----PLSDGMSRLNARLLGLVP---GKP--YSLDNYLSATVPNVSDDNGLP--KLGIH 290
Query: 306 PHKLKGYPTEYLIWYRK 322
P ++ +L + K
Sbjct: 291 PTAVEAVVPTFLGPHEK 307
>gi|220933518|ref|YP_002512417.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219994828|gb|ACL71430.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 314
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 12/235 (5%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G ++V +L G +V V R E RH L+ L + ++ + D T+
Sbjct: 7 CVLGGTGFVGSHLVARLIASGRRVKVITRRRE---RHRDLL-VLPGVSLIEGDVNDPATL 62
Query: 71 KATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
K + V+NLIG E F + ++ +A + G + R + +S LGA
Sbjct: 63 KRHFTGCDAVVNLIGILNEKGHDGSGFRRAHVDLSRHVAETCRATG-VKRLLHMSALGAD 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPW---ATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
+ + + ++ E+++R TI RP+ + G D LN++A ++ PL
Sbjct: 122 AGTGTSLYQRTKGEAESLVRTQSGDTKVTIFRPSVIFGPGDSFLNRFAGLLRIAPVLPLA 181
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
G+ R PVYV DV +L+D GT G+ Y+L GP ++T+ EL + T+
Sbjct: 182 CPGA-RFAPVYVGDVVTRFVDSLEDAGT-FGQRYDLCGPKVYTLKELVQYTARTL 234
>gi|299068339|emb|CBJ39563.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
CMR15]
Length = 334
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 132/297 (44%), Gaps = 33/297 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKM--------GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
V G TGF+G ++ L +V+VP R E H + L ++ M+ +
Sbjct: 8 VLGGTGFIGTQLLSHLVTETFAAPGLPDGRVIVPTRDAESARAHNLTL--LPRVDVMEAD 65
Query: 64 PRDDNTIKATM-------AKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKE 112
D+ + A + VINL+G + R +F + + R+ +
Sbjct: 66 VHADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRRAHVDLPRRVVDACRR 125
Query: 113 HGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNK 171
HG + R + +S LGA + PS +K E V L W T+ RP+ + G D LN
Sbjct: 126 HG-VKRLLHMSALGADPAGPSMYQRSKGDGERIVTDSGLDW-TVFRPSVVFGPGDHFLNL 183
Query: 172 WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+A+ + F PL R QPVYV DVA A AL D+ + G +Y L GP ++T+ E
Sbjct: 184 FARLQRLAPFVPL-ARAEARFQPVYVDDVAVAFAHAL-DNPATFGHVYPLVGPRVYTLAE 241
Query: 232 LAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGL--FNLDEINA 285
L T +P ++ P++ + + L +++P PL R L +D I+A
Sbjct: 242 LVRFA-GTASGHPRWI---VPLSDTMGRLQATLFEQLPGSPLSRDNLDSMRIDNISA 294
>gi|313125418|ref|YP_004035682.1| nucleoside-diphosphate sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|448286985|ref|ZP_21478201.1| nucleoside-diphosphate sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|312291783|gb|ADQ66243.1| predicted nucleoside-diphosphate sugar epimerase [Halogeometricum
borinquense DSM 11551]
gi|445572731|gb|ELY27261.1| nucleoside-diphosphate sugar epimerase [Halogeometricum borinquense
DSM 11551]
Length = 300
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G +GF+G + ++L + G +V R D + +G + ++IK
Sbjct: 5 VVGGSGFVGTNLCRELKERGHEVTALSRSPSSDELPKGVNKTMGNVTVY-------DSIK 57
Query: 72 ATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ V NL+ + N + V+ E + A++H + RF+Q+S LGA
Sbjct: 58 DAFEGMDAVYNLVALSPLFKPSGGNEMHDKVHRHGTENVVRAAEKHE-VDRFVQMSALGA 116
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
P+ K AE+ V + TI RP+ + G ++ + + + L G
Sbjct: 117 DPDGPTAYIRAKGEAEQIVTESVLDWTIFRPSVIFGDGGEFVS-FTKLLAPPYVSALPGG 175
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G TR QP+YV DV + A++DD +G+ YE+GGPD T+ E+A++++ + V
Sbjct: 176 GKTRFQPLYVDDVVGMMADAIEDD-AHIGERYEIGGPDKLTLAEIAKMIHKSNGRSTTIV 234
Query: 248 KVPFPVAK 255
+P +AK
Sbjct: 235 PIPMGLAK 242
>gi|397775681|ref|YP_006543227.1| NAD-dependent epimerase/dehydratase [Natrinema sp. J7-2]
gi|397684774|gb|AFO59151.1| NAD-dependent epimerase/dehydratase [Natrinema sp. J7-2]
Length = 306
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 132/294 (44%), Gaps = 30/294 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G +GF+G + +L + G V R +D G + P + +I
Sbjct: 5 VAGGSGFIGTTLCAELVERGHAVTALSRSPDD-------AGLPDGVAPAIGDVSAYESIA 57
Query: 72 ATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
T+A + V+NL+ Y+ R + H A + GG+ RF+Q+S LGA
Sbjct: 58 DTVAGHDAVVNLVSLSPLYDPRGGPSHEEIHLGGTENLVRAADAGGVSRFLQMSALGADP 117
Query: 130 SSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFPL 184
+ + K A EAV+RE L W TI+RP+ + G ++ F K L
Sbjct: 118 NGDTAYIRAKGRA-EAVVRESDLEW-TIVRPSVVFGDG----GEFVAFTKTLTTPYVTGL 171
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G TR QP++V D+ + AL+DD +G+ Y+L GP I T+ ++ +L+Y +
Sbjct: 172 PGGGKTRFQPIWVGDLVPMLADALEDD-AHVGETYDLAGPQITTLADVTKLVYAAEGKDV 230
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
V +P +AK + + L VP F D+ + D V+DN +T
Sbjct: 231 TIVPIPMGLAK-IGLAAVDSLPFVP--------FGPDQARSLEFDNTVADNDVT 275
>gi|224065533|ref|XP_002301844.1| predicted protein [Populus trichocarpa]
gi|222843570|gb|EEE81117.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Query: 92 NYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLREL- 150
+ FE++NH MAE+ A I++E GGIMRFIQ+SC GAS+SSPSRV KAA EEAVLRE+
Sbjct: 131 EFIFEELNHGMAEQFAMISREQGGIMRFIQVSCFGASASSPSRVLRAKAAGEEAVLREMH 190
Query: 151 ----PWATIMRPAAM 161
W P A+
Sbjct: 191 RVIISWELSFNPTAI 205
>gi|386361635|ref|YP_006059879.1| nucleoside-diphosphate-sugar epimerase [Thermus thermophilus JL-18]
gi|383510662|gb|AFH40093.1| nucleoside-diphosphate-sugar epimerase [Thermus thermophilus JL-18]
Length = 287
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 108/243 (44%), Gaps = 21/243 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTI 70
V G TGF+G+ VV+ L G LV R P L+ GD+ + VP D +
Sbjct: 5 VVGGTGFVGQEVVRLLLARGHTPLVLARRSRPLPEGAVLVEGDIAREVP------DLEGV 58
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+A + A ++ RE R +F V H R A E G+ R + +S LGA
Sbjct: 59 EAAIYLAGII-----RE---RGQTFRAV-HVEGVRNLLRAMERAGVGRLLHMSALGARPE 109
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ--FVKKFNFFPLFGDG 188
+PSR TKA E V + I RP+ + G D + F PL GDG
Sbjct: 110 APSRYHRTKAEGEALVRQSGLSHAIFRPSLIFGPGDEFFGGVLRGLVCTPLPFVPLIGDG 169
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
S +PVYV DVA AL+ + IY+L GP +T EL +L+ + + ++
Sbjct: 170 SFPFRPVYVGDVAEVFVGALE---RGLEGIYDLVGPKEYTFRELLQLVMEVLGRRKPFLS 226
Query: 249 VPF 251
+P
Sbjct: 227 LPL 229
>gi|83746011|ref|ZP_00943067.1| NADH-ubiquinone oxidoreductase [Ralstonia solanacearum UW551]
gi|207741966|ref|YP_002258358.1| nadh-ubiquinone oxidoreductase protein [Ralstonia solanacearum
IPO1609]
gi|83727405|gb|EAP74527.1| NADH-ubiquinone oxidoreductase [Ralstonia solanacearum UW551]
gi|206593352|emb|CAQ60279.1| nadh-ubiquinone oxidoreductase protein [Ralstonia solanacearum
IPO1609]
Length = 334
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 134/297 (45%), Gaps = 31/297 (10%)
Query: 12 VFGTTGFLGR-----YVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
V G TGF+G V + A G +V+VP R E H + L ++ M+ +
Sbjct: 8 VLGGTGFIGTRLLSCLVTETFATPGLPDGRVIVPTRDAESAQAHNLTL--LPRVDVMEAD 65
Query: 64 PRDDNTIKATM-------AKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKE 112
D+ + A + VINL+G + R +F + + R+ +
Sbjct: 66 VHADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRRAHVDLPRRVVDACRR 125
Query: 113 HGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNK 171
HG + R + +S LGA + PS +K E V +L W T+ RP+ + G +D LN
Sbjct: 126 HG-VKRLLHMSALGADPAGPSMYQRSKGDGERIVTGSDLDW-TVFRPSVVFGPDDHFLNL 183
Query: 172 WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+A+ + F PL R QPVYV DVA A AL D+ + ++Y L GP ++T+ E
Sbjct: 184 FARMQRLAPFVPL-ACAEARFQPVYVDDVATAFAHAL-DNPATFRRVYPLVGPRVYTLAE 241
Query: 232 LAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYT 287
L T +P ++ P++ V + L +++P PL R L ++ N T
Sbjct: 242 LVRFA-GTASGHPRWI---VPLSDTVGRLQATLFEQLPGSPLSRDNLDSMRIDNIST 294
>gi|433637961|ref|YP_007283721.1| putative nucleoside-diphosphate sugar epimerase [Halovivax ruber
XH-70]
gi|433289765|gb|AGB15588.1| putative nucleoside-diphosphate sugar epimerase [Halovivax ruber
XH-70]
Length = 307
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 124/288 (43%), Gaps = 21/288 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G + + LA+ G V R E + G G + D +++
Sbjct: 5 VAGGTGFIGTALCEHLAERGHDVTAMARSPEPSSLPAGVEGVAGDVT-------DPESVE 57
Query: 72 ATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
A +A + V NL+ ++T + + H A E G+ RF Q+S LGA+
Sbjct: 58 AAVAGQDAVYNLVALSPLFQTPSGLSHEAIHLGGTENLLAAAESAGVDRFCQLSGLGAAP 117
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
+P+ K AE AV I+RP+ + G L+ + PL G
Sbjct: 118 DAPTEHLRVKHRAEVAVEAAPLETVIVRPSVVFGENSEFLS-FVDATTTAYVTPLPAGGR 176
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
R QP+++ D+A + + DG G+ YELGGP+ T+ ++ L Y + + V +
Sbjct: 177 MRFQPIWIGDLAPMLADCV--DGPHAGETYELGGPERLTLADVTRLFYASRDQSVQIVPI 234
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297
P A++ L VPF +P F ++ A + D V NA+
Sbjct: 235 PL----ALSELGLTLAGPVPF-VP----FGPEQAKALSVDNTVDRNAI 273
>gi|300692902|ref|YP_003753897.1| NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum PSI07]
gi|299079962|emb|CBJ52639.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
PSI07]
gi|344168492|emb|CCA80782.1| putative NADH dehydrogenase (ubiquinone) [blood disease bacterium
R229]
gi|344173236|emb|CCA88380.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia syzygii R24]
Length = 334
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 144/314 (45%), Gaps = 34/314 (10%)
Query: 12 VFGTTGFLGR-----YVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
V G TGF+G V + A G +V+VP R E H + L ++ M+ +
Sbjct: 8 VLGGTGFIGTRLLSCLVTETFAAPGLPDGRVIVPTRDAESARAHNLTL--LPRVDVMEAD 65
Query: 64 PRDDNTIKATM-------AKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKE 112
D+ + A + VINL+G + R +F + + R+ +
Sbjct: 66 VHADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRRAHVDLPRRVVDACRR 125
Query: 113 HGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNK 171
HG + R + +S LGA + PS +K E + +L W T+ RP+ + G D LN
Sbjct: 126 HG-VKRLLHMSALGADPAGPSMYQRSKGDGERVITGSDLDW-TVFRPSVVFGPGDHFLNL 183
Query: 172 WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+A+ + F PL R QPVYV DVAAA AL D+ + +Y L GP ++T+ E
Sbjct: 184 FARMQRLAPFVPL-ACAEARFQPVYVDDVAAAFAHAL-DNPATFRHVYPLVGPRVYTLAE 241
Query: 232 LAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDT 290
L T +P ++ P++ A+ + L +++P PL R L ++ I++ +++
Sbjct: 242 LVRFA-GTASGHPRWI---VPLSDAMGRLQATLFEQLPGSPLSRDNLDSM-RIDSVSTEP 296
Query: 291 IVSDNALTFQDLGI 304
I + L LG+
Sbjct: 297 IAPE--LDIHPLGM 308
>gi|399055497|ref|ZP_10743241.1| nucleoside-diphosphate-sugar epimerase [Brevibacillus sp. CF112]
gi|433542729|ref|ZP_20499153.1| hypothetical protein D478_03327 [Brevibacillus agri BAB-2500]
gi|398046973|gb|EJL39553.1| nucleoside-diphosphate-sugar epimerase [Brevibacillus sp. CF112]
gi|432186046|gb|ELK43523.1| hypothetical protein D478_03327 [Brevibacillus agri BAB-2500]
Length = 301
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 9/248 (3%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT 73
G TGF+G+ V+++L G + R D H G G + + D ++K+
Sbjct: 7 GATGFVGKGVLERLIAEGHDAVCLTRPGSKDKLHHGQAGP-GSVSLAAGDILDVESLKSA 65
Query: 74 MAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
MA VI+L+G RE + +F ++ + + AK+ G+ RF+ +S LG+ +++
Sbjct: 66 MAGCEAVIHLVGIIREQPGKGITFPKIHVEGTKNVVEAAKQ-AGVKRFVHMSALGSRANA 124
Query: 132 PSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S TK AE+ V+ +P+ I +P+ + G D +N A V + P+ GDGS
Sbjct: 125 TSAYHRTKYEAEQLVIASGIPY-VIFQPSVIFGPGDEFVNMLADLV-RMPVTPVIGDGSY 182
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPHYVKV 249
+QPV VA AL + +IYE GGPD + E+ + + + I ++ V +
Sbjct: 183 PLQPVARKTVADVFVQALSLPAAT-NQIYETGGPDPISYGEILDAIGEAIGKKRVRKVHI 241
Query: 250 PFPVAKAV 257
P K V
Sbjct: 242 PLAFMKPV 249
>gi|344339392|ref|ZP_08770321.1| NAD-dependent epimerase/dehydratase [Thiocapsa marina 5811]
gi|343800696|gb|EGV18641.1| NAD-dependent epimerase/dehydratase [Thiocapsa marina 5811]
Length = 300
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 137/315 (43%), Gaps = 30/315 (9%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP----MKFNPRD 66
V G TGF+GR+++ L+ G + VP RH DL ++VP ++ D
Sbjct: 7 CVIGGTGFVGRHLLNILSGAGYRTRVP-------TRHPHRYRDL-RLVPGCELVQLEQWD 58
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + M + V+NL+G E +FE + M E A G+ ++ +S L
Sbjct: 59 EAGLADLMVGCDAVVNLVGILNEGGGRTFEQSHVGMVESTVRGALA-AGVGAYLHMSALN 117
Query: 127 ASSSSPSRVFSTKAAAE---EAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKF-NFF 182
A + PS +K E A + T+ RP+ + G D L N++A ++ F
Sbjct: 118 ADPAGPSDYLRSKGRGEAVASAAAEQGLAVTVFRPSVIFGPGDGLFNRFASLLRLLPGPF 177
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
PL R PVYV DVAAA+ L+D S G+IYEL GP F + ++ I
Sbjct: 178 PL-ACADARFAPVYVGDVAAAMLRTLRDP-ASRGQIYELCGPRTFALRDILTYTGSRIGR 235
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
V + +A+ A L +K+P +P F+ D + D+I ++ L L
Sbjct: 236 KVRVVALSDRLARLQAR----LFEKLP---GKP--FSTDNYLSLQIDSICREDGLG--RL 284
Query: 303 GIVPHKLKGYPTEYL 317
GI + YL
Sbjct: 285 GIAATDVDAVVPAYL 299
>gi|261855210|ref|YP_003262493.1| NAD-dependent epimerase/dehydratase [Halothiobacillus neapolitanus
c2]
gi|261835679|gb|ACX95446.1| NAD-dependent epimerase/dehydratase [Halothiobacillus neapolitanus
c2]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 31/241 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-----RHLKLMGDLGQIVPMKFNPRD 66
+ G TGF+GR + L++ G V +P R R ++L+G M + R+
Sbjct: 15 ILGGTGFVGRVLASLLSQQGYSVTIPTRHAARHRDMALMRGVRLIGGTPAAADMANDRRE 74
Query: 67 DNTIKATMAKANVVINLIGREYETRNY--SFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+N + +++ +++INLIG E R+ FE H ++A A G+ R++ +S
Sbjct: 75 EN-WQEVLSEGSILINLIGILNEPRHNGEGFEQA-HVHTTQVALKAAAKAGVKRYLHMSA 132
Query: 125 LGASSSSPSRVF-STKAAAEEAVLRELPWA-----------TIMRPAAMIGTEDRLLNKW 172
LGA +++ + +K AE+ WA T RP+ + G +D LN++
Sbjct: 133 LGADANNGGSFYLRSKGKAED-------WAHEFGEQQGIAVTSFRPSVIFGPQDSFLNRF 185
Query: 173 AQFVKKF-NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
AQ + FPL +R PVYV DVA AA+ D T +GK +L GP + + E
Sbjct: 186 AQLARLIPGVFPL-ACADSRFAPVYVGDVADQFMAAMTDTST-IGKRIDLCGPTEYRLRE 243
Query: 232 L 232
L
Sbjct: 244 L 244
>gi|189220486|ref|YP_001941126.1| nucleoside-diphosphate-sugar epimerase [Methylacidiphilum
infernorum V4]
gi|189187344|gb|ACD84529.1| Predicted nucleoside-diphosphate-sugar epimerase [Methylacidiphilum
infernorum V4]
Length = 348
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 117/239 (48%), Gaps = 25/239 (10%)
Query: 24 VQQLAKMGSQVLVPFRGCEDDPRHLKLMGDL------GQIVPMKFNPRDDNTIKATMAKA 77
+QQL ++G +V VP R +P+ + DL G + + F + + I A
Sbjct: 1 MQQLCQLGYRVRVPSR----NPQKKRSFCDLSCEFLAGDLSELSFARKCCSGIDA----- 51
Query: 78 NVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFS 137
VI+L+G E +++ V+ + + + +KE+G + RF+ +S LG + SR
Sbjct: 52 --VIHLVGILVEQGRETYKKVHVQITKNMIQASKENG-VRRFLHMSSLGTRPQAKSRYHQ 108
Query: 138 TKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN----FFPLFGDGSTRI 192
TK AEE V EL W TI +P+ + G D + + + N FPL G +++
Sbjct: 109 TKWTAEELVRNSELDW-TIFQPSVVFGIGDDFTKRLCKMLFFQNNPLLIFPLIEGGKSKL 167
Query: 193 QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
QP++V +VA A AL + T KIY L GP+IF++ E+ L+ + +PF
Sbjct: 168 QPIFVENVAEAFVRALPNPST-FHKIYPLTGPEIFSLKEIMMLILEQAHLAYKIEDIPF 225
>gi|195952452|ref|YP_002120742.1| NAD-dependent epimerase/dehydratase [Hydrogenobaculum sp. Y04AAS1]
gi|195932064|gb|ACG56764.1| NAD-dependent epimerase/dehydratase [Hydrogenobaculum sp. Y04AAS1]
Length = 303
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 19/263 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G+YVV+ L K + R P IV F D+ ++K
Sbjct: 5 VAGGTGFVGKYVVEALEKSTHSYKLLTRKKVSKP----------HIVVDFF---DEESLK 51
Query: 72 ATMA--KANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
K +V+INLIG E ++ +FE++++ + + + +AKE+G I I +S LG
Sbjct: 52 KAFEQEKPDVLINLIGILVEEPSKGITFENIHYLIPKNLYTVAKEYG-IKHIIHMSALGV 110
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
S +PS TK AE+ ++ TI+RP+ +IG E RL F K F+ G
Sbjct: 111 SEEAPSMYHHTKLLAEKFLMSLGIDYTIIRPSLIIGPEQRLFKDLDFFGKYFHIMAHPGI 170
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
S PV V DVA A+ DD KI EL G + +L + + + + +
Sbjct: 171 LSYYFAPVDVRDVAFVFVKAI-DDPNLKNKIIELCGKKPVSFDKLLKDSFKLLGRHAFVL 229
Query: 248 KVPFPVAKAVAMPREILLKKVPF 270
++P P+ E +L+ PF
Sbjct: 230 RLPKPLMYVSGALVEKILEPPPF 252
>gi|170699650|ref|ZP_02890688.1| NADH dehydrogenase [Burkholderia ambifaria IOP40-10]
gi|170135466|gb|EDT03756.1| NADH dehydrogenase [Burkholderia ambifaria IOP40-10]
Length = 319
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 132/313 (42%), Gaps = 24/313 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+G +V L G V + R E RHL+++ + ++ + D T+
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKHVRIGTRRREH-ARHLQML----PVEIVELDALDTRTLA 62
Query: 72 ATMAKANVVINLIGREYETRNYSFE---DVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+A A+ INL+G ++ R + + H A G+ R + +S LGA
Sbjct: 63 RFVAGAHAAINLVGVLHDGRGTPYGPGFERAHVALPAALAAACVEVGVRRVLHMSALGAD 122
Query: 129 SSSPSRVFSTKAAAEEAV----LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
S S +K E A+ + TI RP+ + G D LN +A + PL
Sbjct: 123 SHGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDTFLNTFANLQRTLPVLPL 182
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
R QPV+V DV +A L D + GK YELGGP ++T+ +L +
Sbjct: 183 -AMPDARFQPVFVGDVVSAFVNTL-DLTAAHGKTYELGGPTVYTLEQLVRYCGTLVGRQA 240
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
V++P +A+ A E LP + D + + + ++S +LG+
Sbjct: 241 RIVRLPDALARLQASVFEC--------LPGEPMITRDNLASMSVPNVLSGP--LAPELGL 290
Query: 305 VPHKLKGYPTEYL 317
P L+ YL
Sbjct: 291 SPASLESIAPAYL 303
>gi|300705509|ref|YP_003747112.1| NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum CFBP2957]
gi|299073173|emb|CBJ44531.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
CFBP2957]
Length = 334
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 133/297 (44%), Gaps = 33/297 (11%)
Query: 12 VFGTTGFLGR-----YVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
V G TGF+G V + A G ++VP R E H + L ++ M+ +
Sbjct: 8 VLGGTGFIGTRLLSCLVTETFAAPGLPDGHIIVPTRDAESARAHNLTL--LPRVDVMEAD 65
Query: 64 PRDDNTIKATM-------AKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKE 112
D+ + A + VINL+G + R +F + + R+ +
Sbjct: 66 VHADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRRAHVDLPRRVVDACRR 125
Query: 113 HGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNK 171
HG + R + +S LGA + PS +K E V +L W T+ RP+ + G +D LN
Sbjct: 126 HG-VKRLLHMSALGADPAGPSMYQRSKGDGERIVTGSDLDW-TVFRPSVVFGPDDHFLNL 183
Query: 172 WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+A+ + F PL R QPVYV DVA A AL D+ + +Y L GP ++T+ E
Sbjct: 184 FARMQRLAPFVPL-ACAEARFQPVYVDDVATAFAHAL-DNPATFRHVYPLVGPRVYTLAE 241
Query: 232 LAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGL--FNLDEINA 285
L T +P ++ P++ V + L +++P PL R L +D I+A
Sbjct: 242 LVRFA-GTASGHPRWI---VPLSDTVGRLQATLFEQLPGSPLSRDNLDSMRIDNISA 294
>gi|258515822|ref|YP_003192044.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans
DSM 771]
gi|257779527|gb|ACV63421.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans
DSM 771]
Length = 308
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 113/240 (47%), Gaps = 21/240 (8%)
Query: 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKF- 62
+Y+ + V G G+ G+Y+ ++L G +V + P G+ I P F
Sbjct: 1 MYNTELYAVTGAFGYTGKYITRRLLSQGKRV----KTLTGHPNRHNPFGNHVSIAPFNFE 56
Query: 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMA---ERIAGIAKEHGGIMRF 119
NP D IK ++ A V+IN Y R +S+ V + A +I A E GI R
Sbjct: 57 NP--DKLIK-SLQGATVLIN----TYWVR-FSYGLVTYDKAVANTKILVKAAEKAGIRRI 108
Query: 120 IQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKF 179
+ IS AS S F K E+ ++ I+RP + G ED L+N A +++F
Sbjct: 109 VHISISNASEDSSLPYFKGKGLLEKVIINSNLSYAIIRPTVIFGNEDILINNIAWMLRRF 168
Query: 180 NFFPLFGDGSTRIQPVYVVD-VAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD 238
F + G G +IQPV+V D V V AA K++ I + GP+ FT +EL +L+ D
Sbjct: 169 PLFAIPGPGDYKIQPVFVEDMVDLIVNAAGKEENI----ITDAVGPETFTFNELVQLIRD 224
>gi|77163921|ref|YP_342446.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
gi|76882235|gb|ABA56916.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
Length = 320
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TGF+GR++ L + G +V V R + RH L+ L + M+ + D +
Sbjct: 7 CILGGTGFVGRWLSSHLVEQGYKVRVLTRHWQ---RHRDLL-VLPGLRLMETDVYDPAQL 62
Query: 71 KATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA- 127
A VINLIG E + F V+ + E++A I + GI R + +S L A
Sbjct: 63 AAQFNGCQSVINLIGILNEKGRNGHGFRQVHADLPEKVAQICLD-TGIKRLLHMSALNAD 121
Query: 128 SSSSPSRVFSTKAAAEEAVL---RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF-FP 183
++ S +K E VL R+ TI +P+ + G D N++ +K F FP
Sbjct: 122 ANQGASYYLRSKGEGENRVLALARQGLEVTIFQPSVIFGPGDSFFNRFGSLLKLSPFIFP 181
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
L R+ PVYV DVA A AL D + YEL GP I+T+ +L E
Sbjct: 182 L-ACPEARLTPVYVGDVARAFARALSDK-EDFSQSYELCGPKIYTLKQLVE 230
>gi|409729979|ref|ZP_11271590.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|448722284|ref|ZP_21704822.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|445789995|gb|EMA40668.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
Length = 294
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 132/293 (45%), Gaps = 30/293 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G GF+GRY+ +L + G +V R DP D+G V + ++I+
Sbjct: 5 VTGGGGFIGRYLCDELVERGHEVTALSR----DPDPSIFDEDVGTAV---GDVTAYDSIE 57
Query: 72 ATMAKANVVINLIGRE---YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ V+NL+ + S E V H A A E + RF+Q S LGA
Sbjct: 58 GAFEGRDCVVNLVALSPLFQPPGDKSHEGV-HLRGTENAIRATEAHDVPRFVQQSALGAD 116
Query: 129 SSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFPL 184
+ P+ K AE V +L W TI RP+ + G ++ F KK PL
Sbjct: 117 PNGPTAYIRAKGRAESVVRDSDLDW-TIFRPSVVFGDG----GEFVSFTKKVTPPYLAPL 171
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G TR QP++V D+ + A++DD + +G+ YE+GGP T+ ++A+L Y +
Sbjct: 172 PRGGRTRFQPIWVGDLVPMLADAVEDD-SHVGETYEIGGPAALTLADVAKLAYRAEGKPV 230
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297
V VP + K V M + VPF +P F D+ + D +V+ N +
Sbjct: 231 SVVPVPMGLTK-VGM---AAIGPVPF-VP----FGPDQARSLEMDNVVTHNDI 274
>gi|91200471|emb|CAJ73519.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 305
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 111/244 (45%), Gaps = 18/244 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G GF GRY+ + L G V+ + G+ + P F+ + +
Sbjct: 8 VTGAFGFSGRYIARNLLDRGRNVIT----LTNSLHRPNPFGESVKAYPFNFDKPEK--LA 61
Query: 72 ATMAKANVVIN--LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
+++ +V+ N + Y+T YS N F A + G+ R + S S
Sbjct: 62 ESLSGVSVLYNTYWVRFNYKTFGYSTAIQNTFALFETA----KKAGVKRIVHTSITNPSE 117
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
SSP F KA E+ ++ I+RPA + G E L+N A ++KF FF +FG+G+
Sbjct: 118 SSPYEYFRDKAIIEKNLIESGISYAILRPAVLFGKEGILINNIAWALRKFPFFSIFGEGN 177
Query: 190 TRIQPVYVVDVAA-AVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
R+QP+YV D A AV K + T + I GP+ F+ +L + D I + ++
Sbjct: 178 YRLQPIYVNDFAILAVEQGEKSENTIINAI----GPETFSYRDLVTEIGDIIGKKRLFIS 233
Query: 249 V-PF 251
V PF
Sbjct: 234 VSPF 237
>gi|386827858|ref|ZP_10114965.1| putative nucleoside-diphosphate sugar epimerase [Beggiatoa alba
B18LD]
gi|386428742|gb|EIJ42570.1| putative nucleoside-diphosphate sugar epimerase [Beggiatoa alba
B18LD]
Length = 321
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 144/312 (46%), Gaps = 19/312 (6%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G GFLG+++ +LA G QV V R E +H L+ L + + N D +
Sbjct: 5 CIVGGAGFLGKHLTTRLANQGCQVNVLTRQRE---KHRDLL-VLPTVKVISTNIFDQAEL 60
Query: 71 KATMAKANVVINLIGREYETRN--YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+A A+ V+NL+G E N F H A + A + + +F+ +S L A
Sbjct: 61 NKQLAGADAVVNLVGILNEVGNDGSGFRKA-HVEATKNLLTACKTNKVEKFLYVSALNAD 119
Query: 129 SSS-PSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
+ S +K AE+ +L + +TI RP+ + G D N++A + FP+
Sbjct: 120 AKKGSSNYLRSKGEAEDLILATKGVSSTIFRPSVIFGNGDSFFNRFANLLSLAPVFPVPC 179
Query: 187 DGSTRIQPVYVVDVAAAVTAALKD-DGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+ + PV+V DV A+ +++ +G G+ Y L GP +++ L EL+ T RE
Sbjct: 180 PNA-KFAPVWVNDVVDALVKVIENKNGEHHGQRYNLCGPKVYS---LLELVNYTARELLG 235
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+ P++++ + + + +++P +P ++LD + +D+I F LGI
Sbjct: 236 VKRWIIPLSESQSFLQAKIFERIP---GKP--YSLDNYLSSQTDSICPKEGNDFAKLGIT 290
Query: 306 PHKLKGYPTEYL 317
P ++ Y
Sbjct: 291 PTTVEAVMPRYF 302
>gi|221199726|ref|ZP_03572769.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans
CGD2M]
gi|221208669|ref|ZP_03581669.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans CGD2]
gi|421468607|ref|ZP_15917137.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
multivorans ATCC BAA-247]
gi|221171480|gb|EEE03927.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans CGD2]
gi|221179965|gb|EEE12369.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans
CGD2M]
gi|400231649|gb|EJO61329.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
multivorans ATCC BAA-247]
Length = 319
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 134/318 (42%), Gaps = 24/318 (7%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G + G TGF+G +V L G V + R E RHL ++ + ++ D
Sbjct: 3 GQTVALLGGTGFIGSRLVAALIDAGKHVRIGTRRREHA-RHLSML----PVDIVELETFD 57
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFE---DVNHFMAERIAGIAKEHGGIMRFIQIS 123
++ +A A +NL+G + R + + H A G+ R + +S
Sbjct: 58 TRSLARFVAGAQAAVNLVGVLHGGRGTPYGAGFERAHVALPAALARACAEAGVRRVLHMS 117
Query: 124 CLGASSSSPSRVFSTKA---AAEEAVLRELPWA-TIMRPAAMIGTEDRLLNKWAQFVKKF 179
LGA S PS +K AA A+ P A TI RP+ + G D LN +A+ +
Sbjct: 118 ALGADSHGPSMYQRSKGDGEAALHAIAATEPLAVTIFRPSVVFGPGDAFLNTFARLQRVA 177
Query: 180 NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
PL R QPV+V DV A L+ + G+ YELGGP ++T+ +L
Sbjct: 178 PVLPL-AMPDARFQPVFVGDVVRAFVNTLELS-AAHGRTYELGGPTVYTLEQLVRYCGTL 235
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299
+ V++P +A+ L +V LP + D + + + ++S
Sbjct: 236 VGRQARIVRLPDALAQ--------LQARVFECLPGEPVITRDNLASMSVPNVLSGP--LA 285
Query: 300 QDLGIVPHKLKGYPTEYL 317
+LGIVP L+ YL
Sbjct: 286 PELGIVPASLESIAPAYL 303
>gi|421891347|ref|ZP_16322152.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
K60-1]
gi|378963295|emb|CCF98900.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
K60-1]
Length = 334
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 133/297 (44%), Gaps = 33/297 (11%)
Query: 12 VFGTTGFLGR-----YVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
V G TGF+G V + A G +++VP R E H + L ++ M +
Sbjct: 8 VLGGTGFIGTRLLSCLVTETFATPGLPDGRIIVPTRDAESARAHNLTL--LPRVDVMDAD 65
Query: 64 PRDDNTIKATM-------AKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKE 112
D+ + A + VINL+G + R +F + + R+ +
Sbjct: 66 VHADDALDALFLALTEGGGEHCAVINLVGVLQDVRATPYGPAFRRAHVDLPRRVVDACRR 125
Query: 113 HGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNK 171
HG + R + +S LGA + PS +K E V +L W T+ RP+ + G +D LN
Sbjct: 126 HG-VKRLLHMSALGADPAGPSMYQRSKGDGERIVTGSDLDW-TVFRPSVVFGPDDHFLNL 183
Query: 172 WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
+A+ + F PL R QPVYV DVA A AL D+ + +Y L GP ++T+ E
Sbjct: 184 FARMQRLAPFVPL-ACAEARFQPVYVDDVATAFAHAL-DNPATFRHVYPLVGPRVYTLAE 241
Query: 232 LAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGL--FNLDEINA 285
L T +P ++ P++ V + L +++P PL R L +D I+A
Sbjct: 242 LVRFA-GTASGHPRWI---VPLSDTVGRLQATLFEQLPGSPLSRDNLDSMRIDNISA 294
>gi|448406471|ref|ZP_21572931.1| NAD-dependent epimerase/dehydratase [Halosimplex carlsbadense
2-9-1]
gi|445677838|gb|ELZ30336.1| NAD-dependent epimerase/dehydratase [Halosimplex carlsbadense
2-9-1]
Length = 285
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 132/291 (45%), Gaps = 48/291 (16%)
Query: 25 QQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84
++L + G +V V R +DD + G + D ++I+ + V+ L+
Sbjct: 3 EELVERGHEVTVLSRSPDDDGLSAAVDTYAGDVT-------DYDSIEGAFEGKDAVVYLV 55
Query: 85 ----------GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSR 134
G E R ++ E A+EHG + RF+Q+S LGA + P+
Sbjct: 56 ALSPLFKPDGGDEMHDR------IHRGGTENCLRAAEEHG-VERFVQMSALGADADGPTH 108
Query: 135 VFSTKAAAEEAVLRELPWATIMRPAAMIG------TEDRLLNKWAQFVKKFNFFPLFGDG 188
K AE+ V I RP+ + G T + L W F +PL G G
Sbjct: 109 YLRAKGRAEDLVRDSDSGWVIFRPSIIFGEGGEFVTFTKKLKSW--FAPGVPVYPLPGGG 166
Query: 189 -STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
TR QP++V + + A++DD +G+ YE+GGPD+ T+ E+ EL+YD+ E
Sbjct: 167 KQTRFQPIWVGEFVPMIADAVEDD-EHVGETYEVGGPDVLTLREVTELVYDS--EDKSIS 223
Query: 248 KVPFPVAKA-VAMPREILLKKVPFPLPRPGLFNL--------DEINAYTSD 289
VP P+A A + + +L V FP+ + + +L ++++A+ +D
Sbjct: 224 IVPLPMAMANIGLS---VLGSVGFPMGKDQVRSLRLDNTTDRNDVDAFGAD 271
>gi|317050287|ref|YP_004111403.1| NAD-dependent epimerase/dehydratase [Desulfurispirillum indicum S5]
gi|316945371|gb|ADU64847.1| NAD-dependent epimerase/dehydratase [Desulfurispirillum indicum S5]
Length = 292
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 144/303 (47%), Gaps = 28/303 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK--LMGDLGQIVPMKFNPRDDNT 69
V G TGF+G +VV L + G QV + R P+ L+ + LG + ++
Sbjct: 5 VTGGTGFVGSHVVSALLEQGYQVRLLAR----KPQSLRPGMESVLGSM-------EKYDS 53
Query: 70 IKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ + + V++L+G RE+ ++E ++ + A+E G + RFI +S LG+
Sbjct: 54 LLELVEGCDAVVHLVGIIREFPP-AITYEALHTQATLSMLKAAREKG-VNRFIHMSALGS 111
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ S S TK AE+AV TI +P+ + G D +N F+ K P+ GD
Sbjct: 112 APDSRSAYHRTKFVAEKAVQESGLDYTIFKPSVIFGPRDEFINLLLSFL-KLPAIPVIGD 170
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G ++QPV V ++A A ++ + G+ YE+GGP +T EL + + +R +
Sbjct: 171 GKYQLQPVAVDNIAQAFARCIESPA-ARGRTYEVGGPRRYTYDELLDAL-AALRGKGKPL 228
Query: 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307
KV PV+ R L + PF P + D+++ + S+ A+ F DL I P
Sbjct: 229 KVHQPVSLVDFSAR--LFGRFPF-FP----ISSDQLHMLLKGSTTSETAV-FDDLNITPC 280
Query: 308 KLK 310
L+
Sbjct: 281 SLE 283
>gi|46255125|ref|YP_006037.1| NADH-ubiquinone oxidoreductase 39 kDa subunit/NADH dehydrogenase
[Thermus thermophilus HB27]
gi|46197974|gb|AAS82384.1| NADH-ubiquinone oxidoreductase 39 kDa subunit/NADH dehydrogenase
[Thermus thermophilus HB27]
Length = 287
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 107/243 (44%), Gaps = 21/243 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTI 70
V G TGF+GR VV+ L G LV R P L+ GD+ + VP D
Sbjct: 5 VVGGTGFVGREVVRLLLARGHTPLVLARRSRPLPEGAVLVEGDIAREVP------DLEGA 58
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+A + A ++ RE R +F V H R A E G+ R + +S LGA
Sbjct: 59 EAAIYLAGII-----RE---RGQTFRAV-HVEGVRNLLRAMERAGVGRLLHMSALGARPE 109
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ--FVKKFNFFPLFGDG 188
+PSR TKA E V + I RP+ + G D + + F PL GDG
Sbjct: 110 APSRYHRTKAEGEALVRQSGLSHAIFRPSLIFGPGDEFFGRVLRGLVCAPLPFVPLIGDG 169
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+PVYV DVA A AL+ + Y+L GP ++ EL +L+ + + ++
Sbjct: 170 GFPFRPVYVGDVAEAFVGALE---RGLEGTYDLVGPKEYSFRELLQLVMEVLGRRKPFLS 226
Query: 249 VPF 251
+P
Sbjct: 227 LPL 229
>gi|107023964|ref|YP_622291.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia AU
1054]
gi|116691051|ref|YP_836674.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia
HI2424]
gi|105894153|gb|ABF77318.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia AU
1054]
gi|116649140|gb|ABK09781.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia
HI2424]
Length = 319
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 115/261 (44%), Gaps = 16/261 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+G +V L G V + R D RHL+++ + ++ + D T+
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKHVRIGTR-RRDHARHLQML----PVDIVELDALDTRTLA 62
Query: 72 ATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+A A+ INL+G + R FE + + +A E G + R + +S LGA
Sbjct: 63 RFVAGAHAAINLVGVLHGGRGTPYGPGFERAHVALPVALATACSEVG-VRRLLHMSALGA 121
Query: 128 SSSSPSRVFSTKAAAEEAV----LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
S S +K E A+ + TI RP+ + G D LN +A + P
Sbjct: 122 DSRGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDAFLNTFANLQRTVPVLP 181
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L R QPV+V DV A L G + GK YELGGP ++T+ +L +
Sbjct: 182 L-AMPDARFQPVFVGDVVRAFVNTLDLVG-AHGKTYELGGPTVYTLEQLVRYCGTLVGRQ 239
Query: 244 PHYVKVPFPVAKAVAMPREIL 264
V++P +A+ A E L
Sbjct: 240 ARIVRLPDVLARLQASVFECL 260
>gi|328951304|ref|YP_004368639.1| NAD-dependent epimerase/dehydratase [Marinithermus hydrothermalis
DSM 14884]
gi|328451628|gb|AEB12529.1| NAD-dependent epimerase/dehydratase [Marinithermus hydrothermalis
DSM 14884]
Length = 292
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 124/269 (46%), Gaps = 33/269 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+GR++V +L G V V R E + + +G V ++
Sbjct: 5 VIGGTGFIGRHLVARLVAEGHTVWVLSRRGEGPASGARYV--VGDAV-------TGAGLE 55
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGI-----AKEHGGIMRFIQISCLG 126
A + + VI L G E R +F V+ +AG+ A E G+ R++ +S LG
Sbjct: 56 AAVQGQDAVIYLPGILREARGQTFHGVH------VAGVWRTLEALEKAGVARYLHMSALG 109
Query: 127 ASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPA----AMIGTEDRLLNKWAQFVKKFNF 181
A + R F TKA AE V L W TI RP+ G +L + Q
Sbjct: 110 ARPGTGIRYFETKAEAEALVRASSLAW-TIFRPSFVFGKGDGFFGGVLKRLVQ--APLPV 166
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
PL GDG+ +PV+V DVAA AL + GT+ G+ ++L GP +T EL L+ D +
Sbjct: 167 IPLVGDGAFPARPVWVGDVAACFAQALANPGTA-GQAFDLVGPKAYTFKELVLLVRDALG 225
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPF 270
+ +P + V +P LL ++PF
Sbjct: 226 SRKPLLPIPLWLMDRV-VP---LLDRLPF 250
>gi|147669774|ref|YP_001214592.1| NAD-dependent epimerase/dehydratase [Dehalococcoides sp. BAV1]
gi|146270722|gb|ABQ17714.1| NAD-dependent epimerase/dehydratase [Dehalococcoides sp. BAV1]
Length = 302
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 140/299 (46%), Gaps = 18/299 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G +GF+GR+++ +LA+ G ++ + E + +K G + V N D +
Sbjct: 7 VTGGSGFVGRHLLPRLAENGFKIRLLVMN-ETEANRVKTPGV--EFVYGTVN--DLPVLM 61
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
++ +I+L+ E +N +F +VN + + A E+G + RFI + LGAS+
Sbjct: 62 DSLKDVFAIIHLVAILRENKNATFAEVNIEGTKNMLAAATENG-VKRFIHMGILGASADP 120
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF-PLFGDGST 190
+K AEEAV +I++P+ M G +N + K + P+ G+G T
Sbjct: 121 RFTYLHSKYLAEEAVRHSGLGYSILKPSVMFGPGAGFINALIRSFKPYPCIAPVAGNGKT 180
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
R+QP++V DV + + L +G + + ++GGP IFT ++ + +R + VP
Sbjct: 181 RLQPIWVEDVVSCLLKML--EGEKIHQSVQIGGPQIFTYDQVLSAVMQAMRIKKPRLHVP 238
Query: 251 FPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKL 309
+ + + E P +P E+ A + D I ++A+ ++ G P L
Sbjct: 239 VGLMRPLVWLMERASSNPPITMP--------ELKALSVDNITVEDAVK-REFGFDPKPL 288
>gi|55978281|ref|YP_145337.1| NADH-ubiquinone oxidoreductase 39 kDa subunit related protein
[Thermus thermophilus HB8]
gi|55773454|dbj|BAD71894.1| NADH-ubiquinone oxidoreductase 39 kDa subunit related protein
[Thermus thermophilus HB8]
Length = 287
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 110/245 (44%), Gaps = 25/245 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTI 70
V G TGF+G+ VV+ L G LV R P L+ GD+ + VP D +
Sbjct: 5 VVGGTGFVGQEVVRLLLARGHTPLVLARRSRPLPEGAVLVEGDIAREVP------DLEGV 58
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+A + A ++ RE R +F V H R A E G+ R + +S LGA
Sbjct: 59 EAAIYLAGII-----RE---RGQTFRAV-HVEGVRNLLRAMERAGVGRLLHMSALGARPE 109
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ--FVKKFNFFPLFGDG 188
+PSR TKA E V + I RP+ + G D + + F PL GDG
Sbjct: 110 APSRYHRTKAEGEALVRQSGLSHAIFRPSLIFGPGDEFFGRVLRGLVCAPLPFVPLIGDG 169
Query: 189 STRIQPVYVVDVAAAVTAALKD--DGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
+PVYV DVA A AL+ +GT Y+L GP ++ EL +L+ + + +
Sbjct: 170 GFPFRPVYVGDVAEAFVGALERGLEGT-----YDLVGPKEYSFRELLQLVMEVLGRRKPF 224
Query: 247 VKVPF 251
+ +P
Sbjct: 225 LSLPL 229
>gi|448320265|ref|ZP_21509753.1| NAD-dependent epimerase/dehydratase [Natronococcus amylolyticus DSM
10524]
gi|445606671|gb|ELY60575.1| NAD-dependent epimerase/dehydratase [Natronococcus amylolyticus DSM
10524]
Length = 301
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 28/293 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD---PRHLKLMGDLGQIVPMKFNPRDDN 68
V G TGF+G ++ +L + G V R ++ P + MGD +
Sbjct: 5 VAGGTGFIGTHLCMELHERGHDVTALSRSPDEADLPPEIDRAMGDASAY----------D 54
Query: 69 TIKATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I + + V+NL+ YE + H + A E G+ RF+Q+S LG
Sbjct: 55 SIVEEVEGHDAVVNLVSLSPLYEPPEGTSHQEVHLGGTKNLVRACEERGVDRFVQMSALG 114
Query: 127 ASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A + + +K AE V +L W TI+RP+ + G ++ Q + L
Sbjct: 115 ADADGATDYIRSKGRAESVVTGSDLEW-TIVRPSVVFGDGGEFVDFTKQLTTP-HITGLP 172
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G TR QP++V D+ + L+DD T +G+ YE GP + T+ ++ EL Y +
Sbjct: 173 GGGKTRFQPIWVGDLVPMLADILEDD-THVGETYEFAGPQVATLADVTELAYAAEGKSVT 231
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
V +P + K K VPF +P F D+ + D ++DN +T
Sbjct: 232 IVPIPMELTKLGLTAA----KPVPF-IP----FGPDQARSLEMDNTLADNDVT 275
>gi|402565210|ref|YP_006614555.1| NADH dehydrogenase [Burkholderia cepacia GG4]
gi|402246407|gb|AFQ46861.1| NADH dehydrogenase [Burkholderia cepacia GG4]
Length = 318
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 24/313 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+G +V L G QV + R E RHL+++ + ++ + D T+
Sbjct: 7 LLGGTGFIGSRLVNALIDAGKQVRIGTRRREH-ARHLQML----PVEIVELDALDTRTLA 61
Query: 72 ATMAKANVVINLIGREYETRNYSFE---DVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+A A+ +NL+G + R + + H A G+ R + +S LGA
Sbjct: 62 RFVAGAHAAVNLVGVLHGGRGTPYGPGFERAHVALPAALAAACVEVGVQRVLHMSALGAD 121
Query: 129 SSSPSRVFSTKAAAEEAV----LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
S S +K E A+ + TI RP+ + G D LN +A + PL
Sbjct: 122 SHGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDAFLNTFANLQRTLPVLPL 181
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
R QPV+V DV A L D + G+ YELGGP ++T+ +L +
Sbjct: 182 -AMPDARFQPVFVGDVVRAFVNTL-DLAAAYGRTYELGGPTVYTLEQLVRYCGTLVGRQA 239
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
V++P +A+ A E LP + D + + + ++S +LG+
Sbjct: 240 RIVRLPDALARLQASVFEC--------LPGEPVLTRDNLASMSVPNVLSGP--LAPELGL 289
Query: 305 VPHKLKGYPTEYL 317
P L+ YL
Sbjct: 290 SPASLESIAPAYL 302
>gi|435845863|ref|YP_007308113.1| putative nucleoside-diphosphate sugar epimerase [Natronococcus
occultus SP4]
gi|433672131|gb|AGB36323.1| putative nucleoside-diphosphate sugar epimerase [Natronococcus
occultus SP4]
Length = 301
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 34/296 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKL-MGDLGQIVPMKFNPRDDN 68
V G TGF+G ++ +L + G V R +D P + L MGD +
Sbjct: 5 VAGGTGFIGTHLCTELHERGHDVTALSRNPDDADLPSGIDLAMGDASAY----------D 54
Query: 69 TIKATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I + +VV+NL+ YE + H A E G+ RF+Q+S LG
Sbjct: 55 SIVEDVDGHDVVVNLVSLSPLYEPPEGTSHHEVHLGGTENLVRACEERGVDRFVQMSALG 114
Query: 127 ASSSSPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FF 182
A S + K +E AV +L W TI+RP+ + G ++ +F K+
Sbjct: 115 ADSDGTTDYIRAKGDSETAVRESDLDW-TIVRPSVVFGEG----GEFVEFTKELTTPYVT 169
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
L G G TR QP++V D+ + ++DD +G+ YE GP + T+ ++ EL Y+ +
Sbjct: 170 GLPGGGKTRFQPIWVGDLVPMLADIVEDDA-HVGETYEFAGPQVATLADVTELAYEAEGK 228
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
V +P + K K VPF +P F D+ + D ++DN +T
Sbjct: 229 SVTIVPIPMELTKLGLTAA----KPVPF-IP----FGPDQARSLEMDNTLADNDVT 275
>gi|384432409|ref|YP_005641768.1| NAD-dependent epimerase/dehydratase [Thermus thermophilus
SG0.5JP17-16]
gi|333967877|gb|AEG34641.1| NAD-dependent epimerase/dehydratase [Thermus thermophilus
SG0.5JP17-16]
Length = 287
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 109/243 (44%), Gaps = 21/243 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTI 70
V G TGF+G+ VV++L G LV R P+ L+ GD+ + VP D
Sbjct: 5 VVGGTGFVGQEVVRRLLLRGHTPLVLARKPRPLPQGAVLVEGDIAREVP------DLEGA 58
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+A + A ++ RE R +F V H R A E G+ R + +S LGA
Sbjct: 59 EAAIYLAGII-----RE---RGQTFRAV-HVDGVRNLLRAMERAGVGRLLHMSALGARPE 109
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ--FVKKFNFFPLFGDG 188
+PSR TKA E V + I RP+ + G D + F PL GDG
Sbjct: 110 APSRYHRTKAEGEALVRQSGLSHAIFRPSLIFGPGDEFFGGVLRGLVCTPLPFVPLIGDG 169
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
S +PVYV DVA A AL+ + Y+L GP +T EL +L+ + + ++
Sbjct: 170 SFPFRPVYVGDVAEAFVGALE---RGLEGTYDLVGPKEYTFRELLQLVMEVLGRRKPFLS 226
Query: 249 VPF 251
+P
Sbjct: 227 LPL 229
>gi|350552374|ref|ZP_08921577.1| NAD-dependent epimerase/dehydratase [Thiorhodospira sibirica ATCC
700588]
gi|349794545|gb|EGZ48359.1| NAD-dependent epimerase/dehydratase [Thiorhodospira sibirica ATCC
700588]
Length = 313
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 132/295 (44%), Gaps = 27/295 (9%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP----MKFNPRD 66
V G +GFLG++V+ QLA + V R RH L+ IVP +K + D
Sbjct: 7 CVLGGSGFLGQHVLSQLASPQRMINVITR---HPYRHRHLL-----IVPGVRLIKADIHD 58
Query: 67 DNTIKATMAKANVVINLIGREYETR--NYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
T+ + + VINL+G E R + ++ + +I +E + R + +S
Sbjct: 59 PATLNRLFSGVDAVINLVGSFDEGRHPDTRLRHLHVDLVRKIMSACREQ-RVARLLHVST 117
Query: 125 LGA-SSSSPSRVFSTKAAAEEAVLREL--PWATIMRPAAMIGTEDRLLNKWAQFVKKFNF 181
L A +S+ PS TK E V + TI RP+ + G +D L ++A ++ F
Sbjct: 118 LNADASNGPSEYLRTKGEGENLVHTQAGETQTTIFRPSMIFGPQDGFLTEFATLLR---F 174
Query: 182 FPLF--GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
P+F R PV+ DVAA + ALK S+GK Y+L GP ++T+ +L Y
Sbjct: 175 SPVFFVPCPGFRCAPVFAGDVAACMAQALKQR-HSVGKRYDLCGPKVYTLAQLVR--YTA 231
Query: 240 IREYPHYVKVPFPVAKAVAMPREI-LLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293
+ VP P + R + +L PF + R +LD + +T S
Sbjct: 232 TLTGQRRLIVPLPDGASRLQARLLGILPGKPFSMDRYHTLSLDSLCTSGENTRCS 286
>gi|381190063|ref|ZP_09897587.1| NADH-ubiquinone oxidoreductase 39 kDa subunit related protein
[Thermus sp. RL]
gi|380452093|gb|EIA39693.1| NADH-ubiquinone oxidoreductase 39 kDa subunit related protein
[Thermus sp. RL]
Length = 287
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 105/243 (43%), Gaps = 21/243 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTI 70
V G TGF+G+ VV+ L G LV R P L+ GD+ + VP D
Sbjct: 5 VVGGTGFVGQEVVRLLLARGHTPLVLARRSRPLPEGAVLVEGDIAREVP------DLEGA 58
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+A + A ++ R +F V H R A E G+ R + +S LGA
Sbjct: 59 EAAIYLAGII--------RERGQTFRAV-HVDGVRNLLRAMERAGVGRLLHMSALGARPE 109
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQ--FVKKFNFFPLFGDG 188
+PSR TKA E V + I RP+ + G D + F PL GDG
Sbjct: 110 APSRYHRTKAEGEALVRQSGXXHAIFRPSLIFGPGDEFFGGVLRGLVCAPLPFVPLIGDG 169
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
S +PVYV DVA A AL+ + Y+L GP +T EL +L+ + + ++
Sbjct: 170 SFPFRPVYVGDVAEAFVGALE---RGLEGTYDLVGPKEYTFRELLQLVMEVLGRRKPFLS 226
Query: 249 VPF 251
+P
Sbjct: 227 LPL 229
>gi|115353129|ref|YP_774968.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD]
gi|115283117|gb|ABI88634.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD]
Length = 319
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 24/313 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+G +V L G V + R D RHL+++ + ++ + D T+
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKHVRIGTRR-RDHARHLQML----PVEIVELDALDTRTLA 62
Query: 72 ATMAKANVVINLIGREYETRNYSFE---DVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+A A+ INL+G ++ R + + H A G+ R + +S LGA
Sbjct: 63 RFVAGAHAAINLVGVLHDGRGTPYGPGFERAHVALPAALAAACVEVGVQRVLHMSALGAD 122
Query: 129 SSSPSRVFSTKAAAEEAV----LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
S S +K E A+ + TI RP+ + G D LN +A + PL
Sbjct: 123 SHGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDTFLNTFANLQRTLPVLPL 182
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
R QPV+V DV A L D + GK YELGGP ++T+ +L +
Sbjct: 183 -AMPDARFQPVFVGDVVTAFVNTL-DLTAAHGKTYELGGPTVYTLEQLVRYCGTLVGRQA 240
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
V++ +A+ L +V LP + D + + + ++S +LG+
Sbjct: 241 RIVRLSDALAQ--------LQARVFECLPGEPMITRDNLASMSVPNVLSGP--LAPELGL 290
Query: 305 VPHKLKGYPTEYL 317
P L+ YL
Sbjct: 291 SPASLESIAPAYL 303
>gi|448304618|ref|ZP_21494554.1| NAD-dependent epimerase/dehydratase [Natronorubrum sulfidifaciens
JCM 14089]
gi|445589999|gb|ELY44220.1| NAD-dependent epimerase/dehydratase [Natronorubrum sulfidifaciens
JCM 14089]
Length = 306
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 15/248 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G + +L + G +V R DPR L + + + D +I
Sbjct: 5 VAGGTGFIGTALCSELHERGYEVTALAR----DPRGSDLPAGV-ETATGDVSAYD--SIA 57
Query: 72 ATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
T+A + V+NL+ Y+ + H A E G + RF+Q+S LGA
Sbjct: 58 GTVADHDAVVNLVALSPLYKPPAGVDHETVHLGGTVNLVRAAEDGDVDRFVQMSALGADP 117
Query: 130 SSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ + K AE AV+R+ L W TI RP+ + G + Q + L G
Sbjct: 118 NGDTDYIRAKGDAE-AVVRDSHLEW-TIFRPSVVFGEGAEFVEFTKQLTTPY-VTGLPGG 174
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G TR QP++V D+ + AL+D T +G+IYE+ GP I T+ + EL Y + V
Sbjct: 175 GKTRFQPIWVGDLVPMLADALEDP-THVGEIYEIAGPQIVTLADATELAYAAEGKSVSIV 233
Query: 248 KVPFPVAK 255
VP +AK
Sbjct: 234 SVPMALAK 241
>gi|76801846|ref|YP_326854.1| NADH dehydrogenase 32K chain-like protein [Natronomonas pharaonis
DSM 2160]
gi|76557711|emb|CAI49294.1| arNOG06768 family NADH-binding domain protein [Natronomonas
pharaonis DSM 2160]
Length = 305
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 123/274 (44%), Gaps = 21/274 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G ++ +L G +V R +D + G + ++I+
Sbjct: 5 VVGGTGFIGTHLCAELHDRGHEVTAMSRSPDDGGVPEGVEATAGDVTTY-------DSIE 57
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFM----AERIAGIAKEHGGIMRFIQISCLGA 127
+ V+NL+ R +++++ + E + A++HG + R +Q+S LGA
Sbjct: 58 PAFEGVDAVVNLVALSPLFRPSGGDEMHYRIHRDGTENVVAAAEKHG-VDRLVQLSALGA 116
Query: 128 SSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
+ K E+ V L W I+RP+ + G + Q + PL G
Sbjct: 117 DPDGETAYIRAKGQGEDIVRSSSLEW-VILRPSVVFGDGGEFIPYTKQLAPAY-LTPLPG 174
Query: 187 DGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246
G TR QP+++ D+A + A +D G+IYELGGP+ T+ +A+L + +
Sbjct: 175 GGKTRFQPIWIGDLAPMIADAATED-EHAGEIYELGGPEALTLASIAKLAHAADGRPVNV 233
Query: 247 VKVPFPVA----KAVAMPREILLKKVPFPLPRPG 276
+ +P VA KA+ E +L +P +PR G
Sbjct: 234 LPIPMAVAGAGLKALGSVPESVLDSLPG-VPRMG 266
>gi|427399715|ref|ZP_18890953.1| hypothetical protein HMPREF9710_00549 [Massilia timonae CCUG 45783]
gi|425721477|gb|EKU84390.1| hypothetical protein HMPREF9710_00549 [Massilia timonae CCUG 45783]
Length = 322
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 148/316 (46%), Gaps = 26/316 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TGF+G+++ +L+ G VLVP R E + L G ++ N DD +
Sbjct: 9 VLIGGTGFIGQHLAARLSDDGVGVLVPVRHYESAKQLTMLPGVDVEVA----NIHDDAVL 64
Query: 71 KATMAKANVVINLIGREYETRNYSF-EDVNHFMAE---RIAGIAKEHGGIMRFIQISCLG 126
+ +A + VINL+G + + E H E RIA + G+ R++ +S LG
Sbjct: 65 RKLLAGRDAVINLVGVLHGGHGRPYGEGFRHLHVELPRRIAAACAD-VGVPRYLHMSALG 123
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELP--WATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
AS+SS S +K+ E A R P AT+ RP+ + G D L +A+ + PL
Sbjct: 124 ASASSSSMYGRSKSDGELAA-RSQPTVAATVFRPSVVFGPGDHFLTMFARLQRHLPLVPL 182
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIREY 243
R QPVYV DVAAA + AL I ELGGP ++T+ +L L RE
Sbjct: 183 AAS-CARFQPVYVGDVAAAFSIALARPDLRDATI-ELGGPAVYTLGQLVRLAGRFAGRER 240
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS--DNALTFQD 301
P + +P A+ A E+ LP L + D +++ D +V+ +ALT +
Sbjct: 241 P-VLGLPDWAARLQARLFEL--------LPGDPLVSRDNLDSMLVDNVVAADTHALTAES 291
Query: 302 LGIVPHKLKGYPTEYL 317
LGI ++ YL
Sbjct: 292 LGIKLTAIESAAPHYL 307
>gi|448728770|ref|ZP_21711091.1| NAD-dependent epimerase/dehydratase [Halococcus saccharolyticus DSM
5350]
gi|445796145|gb|EMA46656.1| NAD-dependent epimerase/dehydratase [Halococcus saccharolyticus DSM
5350]
Length = 295
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 126/293 (43%), Gaps = 33/293 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G GF+GR++ +LA G V R + + +G + ++++
Sbjct: 5 VTGGDGFVGRHLCDELADRGHDVTALSRDPDPSVFEADVETAIGDVTAY-------DSME 57
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFM-----AERIAGIAKEHGGIMRFIQISCLG 126
A + V+NL+ S D HF E A+EHG + R +Q+S LG
Sbjct: 58 GAFADQDAVVNLVALS-PLFQPSGGDEQHFEIHLGGTENAVRAAEEHG-VERLVQMSALG 115
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FF 182
A + +K AE+ V L W TI RP+ + G ++ F KK
Sbjct: 116 ADPQGSTAYIRSKGEAEQVVRDSALDW-TIFRPSVVFGDG----GEFVSFTKKLTPPYLA 170
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
PL G TR QP+++ D+ + A+ +DG + G+ YE+GGP T+ ++A+L Y +
Sbjct: 171 PLPRGGRTRFQPIWIGDLVPMLADAVTEDGHT-GETYEIGGPATLTLADVAKLAYRAEGK 229
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295
V VP + K + M L +P F D+ + D V+DN
Sbjct: 230 SVSIVPVPMGLTK-LGMGLADPLPVIP--------FGSDQARSLEMDNTVADN 273
>gi|167568402|ref|ZP_02361276.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia oklahomensis
C6786]
Length = 319
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 135/320 (42%), Gaps = 26/320 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
G V G TGF+G +V L G+ V + R E RHL ++ + ++
Sbjct: 2 QGQTIAVLGGTGFIGSRLVNALVGAGAHVRIAARHREHA-RHLAML----PVEIVELAAF 56
Query: 66 DDNTIKATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
D + +A A+ +NL+G + R FE + H A + R +
Sbjct: 57 DVRELARFVAGAHAAVNLVGVLHGGRGTPYGEGFERL-HVALPAALAAACIEAHVPRVLH 115
Query: 122 ISCLGASSSSPSRVFSTKAAAEEAVLRELPWA----TIMRPAAMIGTEDRLLNKWAQFVK 177
+S LGA +PS +K E A+ + T+ RP+ + G D LN +A+ +
Sbjct: 116 VSALGADPHAPSMYLRSKGDGEAALHAQAAAGVLDVTVFRPSIVFGPGDAFLNTFARLQR 175
Query: 178 KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
F PL + +QP+YV DVA A+ A D T GK YELGGP + + EL
Sbjct: 176 IFPVVPLAMPDAL-MQPIYVGDVAQAIANACARDATR-GKTYELGGPRTYRLEELVRYAG 233
Query: 238 DTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297
+ V++P +A+ A E+ LP L D + + + ++++
Sbjct: 234 RLVGRSARIVRLPDALARLQACVFEM--------LPGEPLITRDNLASLSVPSVMTGP-- 283
Query: 298 TFQDLGIVPHKLKGYPTEYL 317
+LGI P L+ Y+
Sbjct: 284 IAPELGITPASLESIAPTYI 303
>gi|389847698|ref|YP_006349937.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax
mediterranei ATCC 33500]
gi|448617675|ref|ZP_21666135.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax
mediterranei ATCC 33500]
gi|388245004|gb|AFK19950.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax
mediterranei ATCC 33500]
gi|445748043|gb|ELZ99493.1| NADH dehydrogenase/oxidoreductase-like protein [Haloferax
mediterranei ATCC 33500]
Length = 301
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 33/260 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRG--CEDDPRHLKL-MGDLGQIVPMKFNPRDDN 68
V G TGF+G ++ ++L G V R D P ++ GD+ D N
Sbjct: 5 VVGGTGFIGSHLCRELHSRGHDVTAMSRSPSGADLPDGVETATGDV----------TDYN 54
Query: 69 TIKATMAKANVVINLIGRE--YETRNYS-FEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
++ + V+NL+ +E + + D+ H+ A E + R +Q+S L
Sbjct: 55 SMTDEFEGQDAVVNLVALSPLFEPKGGNRMHDIVHWQGTENVVKAAESHDVPRVVQMSAL 114
Query: 126 GASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---- 180
GA + +K AE AV L W I RP+ + G ++ F K+
Sbjct: 115 GADPEGDTAYIRSKGKAERAVKSSGLDWV-IFRPSVVFGDG----GEFVSFTKRLKGMFA 169
Query: 181 ----FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+PL G+G TR QP++V D+A + A++ D +G+ Y +GGP+ T+ E+ E++
Sbjct: 170 PGVPLYPLPGNGKTRFQPIWVGDLAPMLAGAVEGD-EHVGETYTIGGPENLTLREITEMV 228
Query: 237 YDTIREYPHYVKVPFPVAKA 256
YD E VP P+A A
Sbjct: 229 YDA--EGKSITIVPLPMALA 246
>gi|433592325|ref|YP_007281821.1| putative nucleoside-diphosphate sugar epimerase [Natrinema
pellirubrum DSM 15624]
gi|448333670|ref|ZP_21522860.1| NAD-dependent epimerase/dehydratase [Natrinema pellirubrum DSM
15624]
gi|433307105|gb|AGB32917.1| putative nucleoside-diphosphate sugar epimerase [Natrinema
pellirubrum DSM 15624]
gi|445621832|gb|ELY75300.1| NAD-dependent epimerase/dehydratase [Natrinema pellirubrum DSM
15624]
Length = 306
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 34/293 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKL-MGDLGQIVPMKFNPRDDN 68
V G TGF+G + +LA+ G +V R + P +++ +GD+ +
Sbjct: 5 VAGGTGFIGTNLCAELAERGHEVTALSRSPDGGGLPDGVEVAIGDVSAY----------D 54
Query: 69 TIKATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I T+A + V+NL+ ++ R + H A E G + RF+Q+S LG
Sbjct: 55 SIVDTVAGHDAVVNLVALSPLFKPRGGKSHETVHLGGTENLVRAAEAGDVDRFLQLSALG 114
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FF 182
A + TK AE V L W TI+RP+ + G ++ F K
Sbjct: 115 ADPDGATAYIRTKGKAEGVVRSSALEW-TIVRPSVVFGDG----GEFVDFTKALTTPYVT 169
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE 242
L G G TR QP++V D+ + AL+D+ G+ Y+L GP++ T+ ++ +L Y +
Sbjct: 170 GLPGGGKTRFQPIWVGDLVPMLADALEDE-AHAGETYDLAGPEVLTLADVTKLAYAAEGK 228
Query: 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295
V +P +AK V + + VPF LP F D+ + D V+DN
Sbjct: 229 DITIVPIPMGLAK-VGLSA---IGPVPF-LP----FGPDQARSLAFDNTVTDN 272
>gi|448374446|ref|ZP_21558331.1| NAD-dependent epimerase/dehydratase [Halovivax asiaticus JCM 14624]
gi|445661123|gb|ELZ13918.1| NAD-dependent epimerase/dehydratase [Halovivax asiaticus JCM 14624]
Length = 299
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 122/288 (42%), Gaps = 21/288 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G + ++LA+ G V R E + G G + D +++
Sbjct: 5 VAGGTGFIGTALCERLAERGHDVTAMARSPESSSLPAGVEGVAGDVT-------DRESVE 57
Query: 72 ATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
A +A + V NL+ ++T + + H A E + RF Q+S LG+
Sbjct: 58 AVVAGRDAVYNLVALSPLFQTPSGLSHEAIHLGGTENLLAAAESASVDRFCQLSGLGSGP 117
Query: 130 SSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
+P+ K AE AV I+RP+ + G L+ + PL G
Sbjct: 118 DAPTEHLRVKHRAEVAVEAAPLETVIVRPSVVFGENSEFLS-FVDATTTAYVTPLPAGGR 176
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
R QP+++ D+A + + DG G+ YELGGPD T+ ++ L Y + + V +
Sbjct: 177 MRFQPIWIGDLAPMLADCV--DGPHAGETYELGGPDRLTLADVTRLFYASRDQSVRIVPI 234
Query: 250 PFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297
P ++K L VPF +P F ++ + D V NA+
Sbjct: 235 PMALSKL----GLTLAGPVPF-VP----FGPEQAQGLSVDNTVDRNAI 273
>gi|398818511|ref|ZP_10577098.1| nucleoside-diphosphate-sugar epimerase [Brevibacillus sp. BC25]
gi|398027653|gb|EJL21198.1| nucleoside-diphosphate-sugar epimerase [Brevibacillus sp. BC25]
Length = 303
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 14/287 (4%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT 73
G TGF+GR ++++L G + + R K + QI + D ++
Sbjct: 7 GATGFVGRGILERLQAEGYETVCLTRASSTGKLPNKESAN-AQITEATGDLFDKESLMRA 65
Query: 74 MAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
M + VI+L+G RE + F ++ + + AK+ GI RF+ +S LGA ++
Sbjct: 66 MQGCDSVIHLVGIIREQPGKGIHFSRIHVEGTKNVLDAAKQ-AGIKRFVHMSALGARENA 124
Query: 132 PSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
S TK AE+ V +P+ I RP+ + G D +N A V + P+ GDGS
Sbjct: 125 TSAYHRTKYEAEQLVQESGIPYV-IFRPSVIFGPGDEFVNMLADLV-RLPITPVIGDGSY 182
Query: 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPHYVKV 249
+QPV VA AL + +IYE GGP+ + ++ + + + I + + + +
Sbjct: 183 PLQPVARKTVADVFIQALSRP-EATNQIYETGGPEPLSYGQILDTIGEAIGKRKVNKIHI 241
Query: 250 PFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDN 295
P + K V ++++ P FP+ L L E NA ++ D
Sbjct: 242 PLALMKPVVN----MMERFPFFPITNTQLTMLLEGNACKDGKLLYDT 284
>gi|357037329|ref|ZP_09099129.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum gibsoniae DSM
7213]
gi|355361494|gb|EHG09249.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum gibsoniae DSM
7213]
Length = 302
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 14/287 (4%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68
+ V G TG +G+ +V L K G V R + L G I ++ D
Sbjct: 3 VILVTGGTGLVGKPLVSALVKKGHTVRCLVRSPQKAGEVLP-----GGIEFVQGEINDPE 57
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + VI+L+ E +FE +N + IA + FI +S LGA
Sbjct: 58 SVNKACQGVDKVIHLVAIIREHGEQTFERINVEGTLNLV-IAAGQAEVKHFIHMSALGAC 116
Query: 129 SSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKF--NFFPLF 185
+S + +K EEAV + L W TI+RP+ + G N+ Q ++ F F P+
Sbjct: 117 DNSRYKYVYSKWRGEEAVRQSGLKW-TILRPSVIYGMGFNFFNRMIQSLQMFPRPFVPVP 175
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G GST QP+ V DV + + ++ +G+I E+GGP+ + ++ + + +++ E +
Sbjct: 176 GRGSTLFQPIAVEDVVRCLL-RICENSDMVGRIIEIGGPEHLSYAQMLDRLMESLGEKRY 234
Query: 246 YVKVPFPVAKAVAMPREILLKK---VPFPLPRPGLFNLDEINAYTSD 289
+ VP P+ + V + +L+ P L + + N+ +I+A ++
Sbjct: 235 KLYVPMPLMRLVVPLMDSILRDPPVSPVELKQLDVHNITDIDAVENN 281
>gi|421865602|ref|ZP_16297278.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia H111]
gi|358074486|emb|CCE48156.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia H111]
Length = 319
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 128/313 (40%), Gaps = 24/313 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+G +V L G QV + R E RHL+++ + ++ + D T+
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKQVRIGTRRREH-ARHLQML----PVDIVELDALDTRTLA 62
Query: 72 ATMAKANVVINLIGREYETRNYSFE---DVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+A A+ INLIG + R + H A G+ R + +S LGA
Sbjct: 63 RFVAGAHAAINLIGVLHGGRGTPYGPGFARAHVALPAALATACTEVGVRRLLHMSALGAD 122
Query: 129 SSSPSRVFSTKAAAEEAV----LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
S +K E A+ + TI RP+ + G D LN +A + PL
Sbjct: 123 PHGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDAFLNTFANLQRTVPVLPL 182
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
R QPV+V DV A L D + GK YELGGP ++T+ +L +
Sbjct: 183 -AMPDARFQPVFVGDVVRAFVNTL-DLAGAHGKTYELGGPTVYTLEQLVRYCGTLVGRQA 240
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
V++P +A+ A E LP + D + + ++S +LG+
Sbjct: 241 RIVRLPDALARLQASVFEC--------LPGEPVLTRDNLATMSVPNVLSGP--LAPELGL 290
Query: 305 VPHKLKGYPTEYL 317
P L+ YL
Sbjct: 291 SPASLESIAPAYL 303
>gi|383317898|ref|YP_005378740.1| putative nucleoside-diphosphate sugar epimerase [Frateuria aurantia
DSM 6220]
gi|379045002|gb|AFC87058.1| putative nucleoside-diphosphate sugar epimerase [Frateuria aurantia
DSM 6220]
Length = 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 32/308 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G ++ QL+ G ++ V R E RH L G L V + D +
Sbjct: 8 VLGGTGFVGHSLLGQLSTRGHRLTVLSRHPE---RHRDL-GVLPSTVLRAVDLEDPAQLA 63
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVN------HFMAERIAGIAKEHGGIMRFIQISCL 125
+ A+ VINL+G + F ++ A R+AG+A+ H Q+S L
Sbjct: 64 RHLEGADTVINLVGILNPSGRQGFSQIHIDLPKRLIAACRLAGVAELH-------QMSAL 116
Query: 126 GASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
A SR ++ E+ V + L W T+ RP+ + G D L+ ++A+ ++ FPL
Sbjct: 117 KAGQGL-SRYLKSRGETEQVVRQSGLRW-TLYRPSLIFGRHDSLVGRFARLLRTSPVFPL 174
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
R+ P +V DVA A+ ++ S + +EL GP+ T+ EL + D
Sbjct: 175 -PRAQVRLAPTWVGDVAEAIVRCVEQPLLSQHQTFELYGPETLTLGELVHAIRDAAGLRT 233
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
V++ + +L + P+ RP +LD +D++ + + LGI
Sbjct: 234 RIVELGDGAGR-------LLAQLGPWLPGRP--MSLDNFQTLRTDSVGKSDG--YATLGI 282
Query: 305 VPHKLKGY 312
P ++ +
Sbjct: 283 TPQGIRAW 290
>gi|206558957|ref|YP_002229717.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia J2315]
gi|444357653|ref|ZP_21159177.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia BC7]
gi|444372647|ref|ZP_21172084.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia K56-2Valvano]
gi|198034994|emb|CAR50866.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia J2315]
gi|443593156|gb|ELT61913.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia K56-2Valvano]
gi|443606003|gb|ELT73811.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia BC7]
Length = 319
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 131/314 (41%), Gaps = 26/314 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TGF+G +V L G QV + R E RHL+++ + ++ + D T+
Sbjct: 8 LLGGTGFIGSRLVNALIDAGKQVRIGTRRREH-ARHLQML----PVDIVELDALDTRTLA 62
Query: 72 ATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+A A+ INLIG + R F + + +A E G + R + +S LGA
Sbjct: 63 RFVAGAHAAINLIGVLHGGRGTPYGPGFARAHVALPAALATACTEVG-VRRLLHMSALGA 121
Query: 128 SSSSPSRVFSTKAAAEEAV----LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
S +K E A+ + TI RP+ + G D LN +A + P
Sbjct: 122 DPHGASMYQRSKGDGEAALHAVAATDSLALTIFRPSVVFGPGDAFLNTFANLQRTVPVLP 181
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L R QPV+V DV A L D + GK YELGGP ++T+ +L +
Sbjct: 182 L-AMPDARFQPVFVGDVVRAFVNTL-DLAGAHGKTYELGGPTVYTLEQLVRYCGTLVGRQ 239
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
V++P +A+ A E LP + D + + ++S +LG
Sbjct: 240 ARIVRLPDALARLQASVFEC--------LPGEPVLTRDNLATMSVPNVLSGP--LAPELG 289
Query: 304 IVPHKLKGYPTEYL 317
+ P L+ YL
Sbjct: 290 LSPASLESIAPAYL 303
>gi|167561184|ref|ZP_02354100.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia oklahomensis
EO147]
Length = 319
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 134/320 (41%), Gaps = 26/320 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
G V G TGF+G +V L G+ V + R E RHL ++ + ++
Sbjct: 2 QGQTIAVLGGTGFIGSRLVNALVGAGAHVRIAARHREHA-RHLAML----PVEIVELAAF 56
Query: 66 DDNTIKATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
D +A A+ +NL+G + R FE + H A + R +
Sbjct: 57 DVREFARFVAGAHAAVNLVGVLHGGRGTPYGEGFERL-HVAFPAALAAACIEAHVPRVLH 115
Query: 122 ISCLGASSSSPSRVFSTKAAAEEAVLRELPWA----TIMRPAAMIGTEDRLLNKWAQFVK 177
+S LGA +PS +K E A+ + T+ RP+ + G D LN +A+ +
Sbjct: 116 VSALGADPHAPSMYLRSKGDGEAALHAQAAAGVLDVTVFRPSIVFGPGDAFLNTFARLQR 175
Query: 178 KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
F PL + +QP+YV DVA A+ A D T GK YELGGP + + EL
Sbjct: 176 IFPVVPLAMPDAL-MQPIYVGDVAQAIANACARDATR-GKTYELGGPRTYRLEELVRYAG 233
Query: 238 DTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297
+ V++P +A+ A E+ LP L D + + + ++++
Sbjct: 234 RLVGRSARIVRLPDALARLQACVFEM--------LPGEPLITRDNLASLSVPSVMTGP-- 283
Query: 298 TFQDLGIVPHKLKGYPTEYL 317
+LGI P L+ Y+
Sbjct: 284 IAPELGITPASLESIAPTYI 303
>gi|291294773|ref|YP_003506171.1| NAD-dependent epimerase/dehydratase [Meiothermus ruber DSM 1279]
gi|290469732|gb|ADD27151.1| NAD-dependent epimerase/dehydratase [Meiothermus ruber DSM 1279]
Length = 299
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 134/294 (45%), Gaps = 22/294 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G +G++G ++ Q L + G QV V R E ++ + M +++ ++
Sbjct: 5 IVGGSGYVGTHMAQHLLERGHQVTVASRRGEGPLSGVRYV--------MADAAKNEGLLE 56
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
A + +I L+G E + +F H R + A + GI RF+ +S LG + +
Sbjct: 57 AAQGQ-EALIYLVGIIRERGDQTFRQA-HVDGVRHSLAAAKAAGIARFVHMSALGTARGT 114
Query: 132 PSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQ--FVKKFNFFPLFGDG 188
SR + TKA EE V L W TI+RP+ + G D + F PL GDG
Sbjct: 115 GSRYYETKAEGEELVQASRLDW-TILRPSLIFGQGDEFFGGILKGLVTAPIPFIPLIGDG 173
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+P++V DVAAA AL T + + Y L GP +T EL L+ DT+ +
Sbjct: 174 RFVFRPIWVGDVAAAFEQALGRPNT-IHRSYNLVGPKEYTFRELLLLVRDTLGSRKPLLS 232
Query: 249 VPFPVAKAVAMPREILLKKVPF-PLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
+P + V +P L+ +PF P+ R L N T+D + +A ++
Sbjct: 233 IPLTLMDWV-VP---LISPLPFSPITRDQYLQLKMGN--TADPVHMRHAFALEE 280
>gi|322370410|ref|ZP_08044969.1| hypothetical protein ZOD2009_13007 [Haladaptatus paucihalophilus
DX253]
gi|320550118|gb|EFW91773.1| hypothetical protein ZOD2009_13007 [Haladaptatus paucihalophilus
DX253]
Length = 310
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 15/247 (6%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G +GF+G + ++L G V V R PR L + + + D +I+
Sbjct: 5 IVGGSGFVGTALTEELHGRGHDVTVLSR----SPRDSDLPTGVETV---SGDVTDYESIE 57
Query: 72 ATMAKANVVINLIGRE---YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ + V+NL+ S E V+ E + A+EHG + + +Q+S LGA
Sbjct: 58 GAFSGRDAVVNLVALSPLFKPPSGASHESVHLGGTENVVRAAEEHG-VPKLVQMSALGAD 116
Query: 129 SSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
+ K AEE V L W I+RP+ + G ++ + + + L G
Sbjct: 117 PGGTTAYIRAKGEAEEVVRDSSLEW-VIVRPSVVFGDGGEFVS-FTKVLTTPYVTGLPGG 174
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
G TR QP++V D+A + ++DD +G+ Y+LGGP++ T+ ++A+L Y + +
Sbjct: 175 GKTRFQPIWVGDLAPILADCVEDD-ARLGRAYDLGGPEVLTLADVAKLAYRADGKSVAVL 233
Query: 248 KVPFPVA 254
+P P+A
Sbjct: 234 PIPMPLA 240
>gi|218296786|ref|ZP_03497492.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23]
gi|218242875|gb|EED09409.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23]
Length = 287
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 109/251 (43%), Gaps = 37/251 (14%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+GR +V L + G LV R D P + L GD+ + VP D
Sbjct: 5 VVGGTGFVGRALVPLLLERGHTPLVLSRKPMDLPPGAVWLQGDITREVP------DLRGA 58
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGI-----AKEHGGIMRFIQISCL 125
+A + A ++ E F A + G+ G+ R + +S L
Sbjct: 59 EAAIYLAGII--------------REGPQTFRAVHVEGVRNLVEGMRRAGVGRLLHMSAL 104
Query: 126 GASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQ--FVKKFNFF 182
GA + SR + TKA EE V + L W TI RP+ + G D + + F
Sbjct: 105 GARRGTGSRYYETKAEGEEVVRQSGLSW-TIFRPSLIFGPGDEFFGRVLKNLVCGPLPFV 163
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDD--GTSMGKIYELGGPDIFTVHELAELMYDTI 240
PL GDG +PVYV DVA A AL+ GT Y+L GP +T EL E + +T+
Sbjct: 164 PLIGDGRFPFRPVYVGDVALAFVEALERGVLGT-----YDLVGPREYTFRELLERVMETV 218
Query: 241 REYPHYVKVPF 251
++ +P
Sbjct: 219 GRKKPFLPIPL 229
>gi|448731962|ref|ZP_21714245.1| NAD-dependent epimerase/dehydratase [Halococcus salifodinae DSM
8989]
gi|445805240|gb|EMA55463.1| NAD-dependent epimerase/dehydratase [Halococcus salifodinae DSM
8989]
Length = 295
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 39/299 (13%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD--LGQIVPMKFNPRDDNT 69
V G GF+GR + +LA+ G V R + DP + D +G + ++
Sbjct: 5 VTGGDGFVGRNLCDELAERGHDVTALSR--DPDPSVFEADVDTAIGDVTAY-------DS 55
Query: 70 IKATMAKANVVINLIGREYETRNYSFEDVNHFM-----AERIAGIAKEHGGIMRFIQISC 124
++ A + V+NL+ S D HF E A+EHG + RF+Q+S
Sbjct: 56 MEGAFAGQDSVVNLVALS-PLFQPSGGDEQHFEIHLGGTENAVRAAEEHG-VERFVQMSA 113
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN-- 180
LGA P+ +K A E V+R+ L W TI+RP+ + G ++ F KK
Sbjct: 114 LGADPRGPTAYIRSKGEA-EGVVRDSALDW-TIVRPSVVFGDG----GEFVPFTKKLTTP 167
Query: 181 -FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
L G TR QP+++ D+ + + +DG + G+ YE+GGP T+ ++A+L Y
Sbjct: 168 YLAALPRGGRTRFQPIWIGDLTPMLADTVTEDGHT-GETYEIGGPATLTLADVAKLAYRA 226
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
+ VP + K + M L VP F D+ + D V+DN +T
Sbjct: 227 EGKSVSIAPVPMALTK-LGMGLADPLPVVP--------FGSDQARSLEMDNTVADNDVT 276
>gi|292490382|ref|YP_003525821.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4]
gi|291578977|gb|ADE13434.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4]
Length = 327
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 138/319 (43%), Gaps = 35/319 (10%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP----MKFNPRD 66
+ G TGF+GR++ L G +V V R + RH L+ ++P + + D
Sbjct: 7 CILGGTGFVGRWLAAHLVDHGYRVRVLTRHRQ---RHRDLL-----VLPGLQLKEADIHD 58
Query: 67 DNTIKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+ A ++ + VINL+G E F V+ + E++A + GI R + +S
Sbjct: 59 PAQLTAQLSGCHSVINLVGILNEKGRDGSGFRRVHADLPEKVAQACLD-TGIQRLLHMSA 117
Query: 125 LGASSSS-PSRVFSTKAAAEEAVL---RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
L A ++ S +K E VL + TI RP+ + G D N++ +K
Sbjct: 118 LNADANQGASHYLRSKGEGESRVLALAEQGLQVTIFRPSVIFGPGDSFFNRFGTLLKLSP 177
Query: 181 F-FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239
F FPL R+ PVYV DV A L D S G+ YEL GP I+T+ +L E
Sbjct: 178 FVFPL-ACPDARLTPVYVEDVVQAFVRTLPDK-DSFGQSYELCGPKIYTLQQLVEYTAKV 235
Query: 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDNALT 298
+ + + +++ A E L PG F+ D ++ + +I N L+
Sbjct: 236 LGLRRRVIGLSDKLSRLQADIFEYL----------PGKPFSKDNYDSLQAPSICHQNGLS 285
Query: 299 FQDLGIVPHKLKGYPTEYL 317
+LGI P + YL
Sbjct: 286 --ELGIEPTTIDAVVPGYL 302
>gi|399575971|ref|ZP_10769728.1| hypothetical protein HSB1_17670 [Halogranum salarium B-1]
gi|399238682|gb|EJN59609.1| hypothetical protein HSB1_17670 [Halogranum salarium B-1]
Length = 310
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 129/293 (44%), Gaps = 33/293 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP-MKFNPRDDNTI 70
V G +GF+G + ++L + G V V R ++ DL V ++ + D ++I
Sbjct: 5 VVGGSGFVGTELTRELHRRGHTVSVLSRHPDE--------ADLPTGVETVEGDVTDYDSI 56
Query: 71 KATMAKANVVINLIGRE--YE-TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ V NL+ +E + D H A E G+ RF+Q+S LGA
Sbjct: 57 VGAFEEKEAVFNLVALSPLFEPSGGDEMHDRIHRQGTDHCVKAAEAHGVRRFVQMSALGA 116
Query: 128 SSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFP 183
P+ K AEE V L W T++RP+ + G ++ F KK
Sbjct: 117 DPDGPTAYIRAKGQAEELVTESALDW-TLVRPSVVFGDG----GEFVSFTKKLTTPYVTG 171
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G G TR QP++V D+ + L DD +G+ YELGGP++ T+ E+A+L Y E
Sbjct: 172 LPGGGKTRFQPIWVGDLVPLLADVLGDD-RHVGETYELGGPEVLTLAEVAKLCYRA--EG 228
Query: 244 PHYVKVPFPVAKA-VAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295
V +P P+ A + + +L +P D+ + D V+DN
Sbjct: 229 KSLVVLPVPMVFARIGLTLAGMLPMIP--------MGPDQYRSLRFDNTVADN 273
>gi|121999110|ref|YP_001003897.1| NAD-dependent epimerase/dehydratase [Halorhodospira halophila SL1]
gi|121590515|gb|ABM63095.1| NAD-dependent epimerase/dehydratase [Halorhodospira halophila SL1]
Length = 320
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 137/316 (43%), Gaps = 29/316 (9%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TGF+G +V +LA G ++ R L G + + + D+ +
Sbjct: 7 CVVGGTGFVGMHVANRLADRGYRIRALTRRSHRGRDLLLFPG----LRLFEADVHDEREL 62
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERI---AGIAKEHGGIMRFIQISCLGA 127
+ + VINL G + R ED H + + A + R + +S LGA
Sbjct: 63 VRHFSGCHAVINLAG-AHTGRGGPREDAYHEVHVDLPRRVLAAARRASVPRLVHMSALGA 121
Query: 128 SSSSPSRVFSTKAAAEEAVLRELP---WATIMRPAAMIGTEDRLLNKWA---QFVKKFNF 181
+ SR TK E+ VL P AT+++P+ + G DR LN++A +F F
Sbjct: 122 HPDAVSRFLRTKGEGEQLVLAADPDEIGATVLQPSVIFGAGDRFLNRFAGLLRFAPGVFF 181
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
P R+QPV+ DVA AV A +D T+ G+ Y+L GP I+T+ EL E + +
Sbjct: 182 LP---TPDARLQPVFGGDVAQAVINATEDPRTA-GQTYQLCGPQIYTLRELVEYVAELRG 237
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301
V +P +++ LL P RP + LDE + +++ L
Sbjct: 238 LRRRVVGLPDSLSQLSGR----LLGLAP---GRP--YTLDEYRFTATPNCCAEDGLA--A 286
Query: 302 LGIVPHKLKGYPTEYL 317
LGI + L+ YL
Sbjct: 287 LGIRANALEAITPGYL 302
>gi|159898723|ref|YP_001544970.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
gi|159891762|gb|ABX04842.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
Length = 286
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 115/224 (51%), Gaps = 12/224 (5%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT 73
G +GF+GR+V ++L + G Q+ R P + Q V ++ T
Sbjct: 7 GASGFIGRHVAEELHQAGHQLTCLVRQKPTTP-----INSATQYVAAEW--LKPTTWLDQ 59
Query: 74 MAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPS 133
+A+ ++VIN +G E+R SF+ V+ + + A ++G + + IQIS LGA ++P
Sbjct: 60 LAEHDMVINCVGMLRESRQASFQAVHTSVPIALFKAAAQYG-LQKIIQISALGADVAAPQ 118
Query: 134 RVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRI 192
+KA A++A+ ++ +PW ++RP+ + G + + + + P+ GDGS ++
Sbjct: 119 AFVRSKALADQALSQQSVPW-VVLRPSFVYGAGCYSMELFRRLA-RLPITPILGDGSYQV 176
Query: 193 QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
QP+ + D+ A+ A+ +D T + E GG + + +L E +
Sbjct: 177 QPIQIGDLVRAIRQAV-EDPTITNCLIEAGGSEQLSFRQLLERL 219
>gi|448654613|ref|ZP_21681539.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
californiae ATCC 33799]
gi|445766461|gb|EMA17588.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
californiae ATCC 33799]
Length = 299
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 38/278 (13%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLK-LMGDLGQIVPMKFNPRDDN 68
V G TGF+G+++ + L + G V R ED P ++ + GD+ D
Sbjct: 5 VVGGTGFIGQHLCRALDEQGHAVTALSRSPEDATLPDSVETVAGDV----------TDYG 54
Query: 69 TIKATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+I++ + V L+ + + + E ++ E A+EHG + RF+Q+S
Sbjct: 55 SIESAFEGQDAVYYLVALSPLFKPDGGDKMHERIHLGGTENSVQAAEEHG-VNRFVQLSA 113
Query: 125 LGASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN--- 180
LGA + + +K AE+ V L W TI RP+ + G ++ F K+
Sbjct: 114 LGADPNGDTHYIRSKGQAEQVVTGSSLDW-TIFRPSVVFGKG----GEFVSFTKRLKGMF 168
Query: 181 -----FFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+PL G GS T+ QP++V D+ + +++ + +G+ YE+GGP++ T+ ++
Sbjct: 169 APGVPLYPLPGGGSQTKFQPIWVGDLVPMLVDSIESE-EHVGEAYEIGGPEVLTLRDVTN 227
Query: 235 LMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPL 272
+YD V +P P+AK V + +L V FP+
Sbjct: 228 QVYDAEGSSVSIVPLPMPLAK-VGLS---VLGSVGFPM 261
>gi|448641140|ref|ZP_21677927.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
sinaiiensis ATCC 33800]
gi|445761665|gb|EMA12913.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
sinaiiensis ATCC 33800]
Length = 299
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 38/278 (13%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLK-LMGDLGQIVPMKFNPRDDN 68
V G TGF+G+++ + L + G V R ED P ++ + GD+ D
Sbjct: 5 VVGGTGFIGQHLCRALDEQGHAVTALSRSPEDATLPDGVETVAGDV----------TDYG 54
Query: 69 TIKATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+I++ + V L+ + + + E ++ E A+EHG + RF+Q+S
Sbjct: 55 SIESAFEGQDAVYYLVALSPLFKPDGGDKMHERIHLGGTENSVQAAEEHG-VNRFVQLSA 113
Query: 125 LGASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN--- 180
LGA + + +K AE+ V L W TI RP+ + G ++ F K+
Sbjct: 114 LGADPNGDTHYIRSKGQAEQVVTGSSLDW-TIFRPSVVFGKG----GEFVSFTKRLKGMF 168
Query: 181 -----FFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+PL G GS T+ QP++V D+ + +++ + +G+ YE+GGP++ T+ ++
Sbjct: 169 APGVPLYPLPGGGSQTKFQPIWVGDLVPMLVDSIESE-EHVGETYEIGGPEVLTLRDVTN 227
Query: 235 LMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPL 272
+YD V +P P+AK V + +L V FP+
Sbjct: 228 QVYDAEGSSVSIVPLPMPLAK-VGLS---VLGSVGFPM 261
>gi|448319161|ref|ZP_21508667.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
gi|445596775|gb|ELY50859.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
Length = 301
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 30/294 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKL-MGDLGQIVPMKFNPRDDN 68
V G TGF+G ++ +L + G V R +D P + L MGD +
Sbjct: 5 VAGGTGFIGTHLCTELHERGHDVTALSRSPDDADLPPGIDLAMGDASAY----------D 54
Query: 69 TIKATMAKANVVINLIGRE--YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I + + V+NL+ YE + H A E G+ RF+Q+S LG
Sbjct: 55 SIVEDVDGHDAVVNLVSLSPLYEPPEGTGHREVHLRGTENLVRACEERGVDRFLQMSALG 114
Query: 127 ASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
A + K AE V+RE L W TI+RP+ + G ++ + + L
Sbjct: 115 ADPDGATAYIRAKGEAE-TVVRESDLEW-TIVRPSVVFGEGGEFVDFTKELTTPY-VTGL 171
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G G TR QP+++ D+ + L+DD +G+ YE GP + T+ ++ EL Y+ +
Sbjct: 172 PGGGRTRFQPIWIGDLVPILADVLEDD-ARVGETYEFAGPQVATLADVTELAYEAEGKSV 230
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT 298
V +P +AK K VPF +P F D+ + D ++DN +T
Sbjct: 231 TVVPIPMELAKLGLTAA----KSVPF-IP----FGPDQARSLEMDNTLADNDVT 275
>gi|55379835|ref|YP_137685.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
marismortui ATCC 43049]
gi|55232560|gb|AAV47979.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
marismortui ATCC 43049]
Length = 299
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 38/278 (13%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLK-LMGDLGQIVPMKFNPRDDN 68
V G TGF+G+++ + L + G V R ED P ++ + GD+ D
Sbjct: 5 VVGGTGFIGQHLCRALDEQGHAVTALSRSPEDATLPDGVETVAGDV----------TDYG 54
Query: 69 TIKATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+I++ + V L+ + + + E ++ E A+EHG + RF+Q+S
Sbjct: 55 SIESAFEGQDAVYYLVALSPLFKPDGGDKMHERIHLGGTENSVQAAEEHG-VNRFVQLSA 113
Query: 125 LGASSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN--- 180
LGA + + +K AE+ V L W TI RP+ + G ++ F K+
Sbjct: 114 LGADPNGDTHYIRSKGQAEQVVTGSSLDW-TIFRPSVVFGKG----GEFVSFTKRLKGMF 168
Query: 181 -----FFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+PL G GS T+ QP++V D+ + +++ + +G+ YE+GGP++ T+ ++
Sbjct: 169 APGVPLYPLPGGGSQTKFQPIWVGDLVPMLVDSIESE-EHVGEAYEIGGPEVLTLRDVTN 227
Query: 235 LMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPL 272
+YD V +P P+AK V + +L V FP+
Sbjct: 228 QVYDAEGSSVSIVPLPMPLAK-VGLS---VLGSVGFPM 261
>gi|83720938|ref|YP_440792.1| NADH-ubiquinone oxidoreductase [Burkholderia thailandensis E264]
gi|167579478|ref|ZP_02372352.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia
thailandensis TXDOH]
gi|167617575|ref|ZP_02386206.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia
thailandensis Bt4]
gi|257140557|ref|ZP_05588819.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia
thailandensis E264]
gi|83654763|gb|ABC38826.1| NADH-ubiquinone oxidoreductase, putative [Burkholderia
thailandensis E264]
Length = 319
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 135/320 (42%), Gaps = 26/320 (8%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
G + G TGF+G +V L G+ V + R D RHL + + ++
Sbjct: 2 QGQTIAMLGGTGFIGSRLVNALVDAGAHVRIGARR-RDHARHLATL----PVDIVELTAF 56
Query: 66 DDNTIKATMAKANVVINLIGREYETRNY----SFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
D + +A A+ +NL+G + R FE + H A + R +
Sbjct: 57 DVRELARFVAGAHAAVNLVGVLHGGRGKRYGEGFERL-HVALPAALAAACIEARVPRMLH 115
Query: 122 ISCLGASSSSPSRVFSTKAAAEEAVLRELPWA----TIMRPAAMIGTEDRLLNKWAQFVK 177
+S LGA ++PS +K E A+ + T+ RP+ + G D LN +A+ +
Sbjct: 116 VSALGADPNAPSMYLRSKGDGEAALHAQAAAGVLDVTVFRPSIVFGPGDAFLNTFARLQR 175
Query: 178 KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
F PL + +QP+YV DVA A+ A D T G+ YELGGP + + E+
Sbjct: 176 IFPVLPLAMPDAL-MQPIYVGDVAQAIANACARDATR-GRTYELGGPRTYRLEEIVRYAG 233
Query: 238 DTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297
+ V++P +A+ A E+ LP L D + + + ++++
Sbjct: 234 RLVGRPARIVRLPDALARLQACVFEM--------LPGEPLITRDNLASLSVPSVMTGP-- 283
Query: 298 TFQDLGIVPHKLKGYPTEYL 317
+LGI P L+ Y+
Sbjct: 284 IAPELGITPASLESIAPTYI 303
>gi|257387465|ref|YP_003177238.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM
12286]
gi|257169772|gb|ACV47531.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM
12286]
Length = 306
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 128/299 (42%), Gaps = 39/299 (13%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G +GF+G + L G V V R D L Q + + D ++I+
Sbjct: 5 LVGGSGFIGTNLCTALVDRGHDVTVLAR--SPDAADLPT-----QATTVAGDVTDYDSIE 57
Query: 72 ATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ INL+ + N + V+ E A+EHG + RF+Q+S LGA
Sbjct: 58 GAFEGQDAAINLVALSPLFKPSGGNEMHDRVHRGGTEHCVRAAEEHG-VERFVQMSALGA 116
Query: 128 SSSSPSRVFSTKAAAEEAVL-RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN------ 180
+ + +K AEE V L W I+RP+ + G ++ QF K+
Sbjct: 117 DADGATHYIRSKGRAEEIVRDSSLDW-VIVRPSVVFGDG----GEFVQFTKRLKGMFAPG 171
Query: 181 --FFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
+PL G G TR QP++V D+ + AL + +G++YELGGP++ T+ E+ E +Y
Sbjct: 172 VPIYPLPGGGKQTRFQPIWVGDLVPMLADALTE-AEYVGEVYELGGPEVLTLREVTEQVY 230
Query: 238 DTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGL-FNLDEINAYTSDTIVSDN 295
+ V +P +A I LK + F PG D+ + D DN
Sbjct: 231 EAADGSVTIVGLPMALAG-------IGLKTLGF---VPGFPMGGDQYRSLNFDNTTDDN 279
>gi|448634440|ref|ZP_21674838.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
vallismortis ATCC 29715]
gi|445749413|gb|EMA00858.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula
vallismortis ATCC 29715]
Length = 299
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 38/278 (13%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLM-GDLGQIVPMKFNPRDDN 68
V G TGF+G+++ ++L + G V R +D P ++ + GD+ D
Sbjct: 5 VVGGTGFIGQHLCRELDERGHTVTALSRSPDDATLPDGVETVSGDV----------TDYG 54
Query: 69 TIKATMAKANVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+I++ +VV L+ + + + E ++ E A+EHG + RF+Q+S
Sbjct: 55 SIESAFEDQDVVYYLVALSPLFKPDGGDTMHERIHLGGTENSVQAAEEHG-VDRFVQLSA 113
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN--- 180
LGA + + +K AE V L W TI RP+ + G ++ F K+
Sbjct: 114 LGADPNGDTHYIRSKGEAERVVTESSLDW-TIFRPSVVFGEG----GEFVSFTKRLKGMF 168
Query: 181 -----FFPLFGDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+PL G G T+ QP++V D+ + +++ + +G+ YE+GGPD+ T+ ++
Sbjct: 169 APGVPLYPLPGGGRQTKFQPIWVGDLVPMLVDSIESE-EHVGETYEVGGPDVLTLRDVTN 227
Query: 235 LMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPL 272
+YD V +P P+AK V + +L V FP+
Sbjct: 228 QVYDAEGASVSIVPLPMPLAK-VGLS---VLGGVGFPM 261
>gi|226310652|ref|YP_002770546.1| hypothetical protein BBR47_10650 [Brevibacillus brevis NBRC 100599]
gi|226093600|dbj|BAH42042.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 303
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 34/297 (11%)
Query: 14 GTTGFLGRYVVQQL----------AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
G TGF+GR ++++L + GS +PF + P + GDL
Sbjct: 7 GATGFVGRGILERLQAEGYETVCLTRAGSTGKLPFTETAN-PHVTEATGDL--------- 56
Query: 64 PRDDNTIKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
D ++ M + VI+L+G RE + SF ++ + + AK+ GI R +
Sbjct: 57 -FDKESLMRAMQGCDAVIHLVGIIREQPGKGISFSRIHVEGTKNVLDAAKQ-AGIKRIVH 114
Query: 122 ISCLGASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
+S LGA ++ S TK AE+ V +P+ I RP+ + G D +N A V +
Sbjct: 115 MSALGARKNATSAYHRTKYEAEQLVQTSGIPYV-IFRPSVIFGPGDEFVNMLADLV-RLP 172
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
P+ GDGS +QPV VA AL S + YE GGP+ + ++ + + + I
Sbjct: 173 VTPVIGDGSYPLQPVARKTVADVFVQALSRP-ESTNQTYETGGPERLSYGQILDTIGEAI 231
Query: 241 -REYPHYVKVPFPVAKAVAMPREILLKKVP-FPLPRPGLFNLDEINAYTSDTIVSDN 295
+ + + +P + K V ++++ P FP+ L L E NA ++ D
Sbjct: 232 GKRKVNKIHIPLALMKPVVN----MMERFPFFPITNTQLTMLLEGNACKDGKLLYDT 284
>gi|149917511|ref|ZP_01906008.1| probable NADH-ubiquinone oxidoreductase [Plesiocystis pacifica
SIR-1]
gi|149821574|gb|EDM80972.1| probable NADH-ubiquinone oxidoreductase [Plesiocystis pacifica
SIR-1]
Length = 554
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 104/229 (45%), Gaps = 21/229 (9%)
Query: 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
+ V G +GF+GR+VV L G +V+V RG L G+ ++ + F
Sbjct: 2 LTVAVAGGSGFIGRHVVDHLRAQGCRVVVLARGLRG------LEGEGVELRRVDFAGPWS 55
Query: 68 NTIKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +A + V+NL+G R SFE + + + +A A+ G I RF+ +S
Sbjct: 56 EQGASLLAGCDAVVNLVGIKRAGRGSGLSFEAAHVELPKALAEAARREG-IERFVHVSVA 114
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP-- 183
GA S TKA E AV P ATI+RP + G D +L A V+ FP
Sbjct: 115 GARRHPRSTYLDTKARGEAAVREGFPAATILRPGVVYGRGDDMLRNLADSVRAAPVFPAP 174
Query: 184 -----LFGDGS---TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP 224
G G+ + PV V DVA AV A+ +G G++ ++ GP
Sbjct: 175 RRPRSATGTGTGTWAELCPVAVEDVAEAVWRAV--EGRGQGQVLDVVGP 221
>gi|403213038|emb|CAP14413.2| arNOG06768 family NADH-binding domain protein [Halobacterium
salinarum R1]
Length = 295
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 133/299 (44%), Gaps = 31/299 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G ++ ++L G V R +P L D+ +IV D T+K
Sbjct: 5 VTGGTGFIGTHLCRELDDRGHDVTAFAR----EPADAALPADVTRIV-------GDVTVK 53
Query: 72 ATMAKA----NVVINLIGR----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
T+A A + V+NL+ + + DV+ E + A E G+ +Q+S
Sbjct: 54 ETVANAIDGHDAVVNLVALSPLFKPSGGDSRHLDVHLGGTENVVAAASE-AGVEYILQLS 112
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
L A + P+ K AEEAV TI+RP+ + G + Q +
Sbjct: 113 ALDADPTGPTAYLRAKGRAEEAVRSSDLHHTIVRPSVVFGDGGEFVPFTKQLTTPY-VTG 171
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243
L G G+++ QP++V D+ + AL + G+ Y++GGPD+ T+ ++ + Y +
Sbjct: 172 LPGGGASKFQPIWVGDLVPMLADALGTE-AHWGETYDIGGPDVLTLADVTRMAYRAAGKS 230
Query: 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302
+ VP P+A AV + L +PF +P D+ + D S N +T D+
Sbjct: 231 VRVLPVPMPLA-AVGL---TLADPLPF-VP----MGADQYRSLKLDNTTSANDVTAFDV 280
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.139 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,306,137,516
Number of Sequences: 23463169
Number of extensions: 222962435
Number of successful extensions: 521255
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 2029
Number of HSP's that attempted gapping in prelim test: 515877
Number of HSP's gapped (non-prelim): 3143
length of query: 327
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 185
effective length of database: 9,027,425,369
effective search space: 1670073693265
effective search space used: 1670073693265
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)