BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047629
(615 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 123/273 (45%), Gaps = 51/273 (18%)
Query: 344 SVYRATI-DGKVLAVKKIKEDVTE--------ELRILQRINHANLVKLMGVSSDSQGNRF 394
VY+ + DG ++AVK++KE+ T+ E+ ++ H NL++L G + R
Sbjct: 45 KVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM-TPTERL 103
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LVY Y NGS+ L L W +R R+AL A GL Y+H+H P I+H
Sbjct: 104 LVYPYMANGSVASCLRERPESQPP------LDWPKRQRIALGSARGLAYLHDHCDPKIIH 157
Query: 455 RDIRTNNIQLDSRFKAKIANFSLA---------------------AP---ATNDVMPKFD 490
RD++ NI LD F+A + +F LA AP +T K D
Sbjct: 158 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTD 217
Query: 491 VFAFGVVLLELLSGKKA---TRTTENGKTAVL-WKEIXXXXXXXXXXXXXXXNWMDPNLE 546
VF +GV+LLEL++G++A R + +L W +D +L+
Sbjct: 218 VFGYGVMLLELITGQRAFDLARLANDDDVMLLDW-------VKGLLKEKKLEALVDVDLQ 270
Query: 547 SFYPIDGALSLATLARACTMDKSLSRPNMAEVV 579
Y + L +A CT + RP M+EVV
Sbjct: 271 GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 136/305 (44%), Gaps = 55/305 (18%)
Query: 316 YLGKPIVYEIEVIMESTMNLSEHYSIGKS----VYRATI-DGKVLAVKKIKEDVTE---- 366
+LG+ + + + ++ N S +G+ VY+ + DG ++AVK++KE+ +
Sbjct: 21 HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL 80
Query: 367 ----ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
E+ ++ H NL++L G + R LVY Y NGS+ L
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCM-TPTERLLVYPYMANGSVASCLRERPESQPP---- 135
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---- 478
L W +R R+AL A GL Y+H+H P I+HRD++ NI LD F+A + +F LA
Sbjct: 136 --LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Query: 479 -----------------AP---ATNDVMPKFDVFAFGVVLLELLSGKKA---TRTTENGK 515
AP +T K DVF +GV+LLEL++G++A R +
Sbjct: 194 YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 253
Query: 516 TAVL-WKEIXXXXXXXXXXXXXXXNWMDPNLESFYPIDGALSLATLARACTMDKSLSRPN 574
+L W +D +L+ Y + L +A CT + RP
Sbjct: 254 VMLLDW-------VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK 306
Query: 575 MAEVV 579
M+EVV
Sbjct: 307 MSEVV 311
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 46/195 (23%)
Query: 345 VYRATIDGKVLAVKKI-----------KEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
VY+ ++ +AVKK+ K+ +E++++ + H NLV+L+G SSD +
Sbjct: 47 VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD-DL 105
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
LVY Y NGSL L L+W R ++A ANG+ ++HE+ +
Sbjct: 106 CLVYVYMPNGSLLDRLSCLDGTPP-------LSWHMRCKIAQGAANGINFLHENHH---I 155
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA----------------------APAT--NDVMPKF 489
HRDI++ NI LD F AKI++F LA AP ++ PK
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKS 215
Query: 490 DVFAFGVVLLELLSG 504
D+++FGVVLLE+++G
Sbjct: 216 DIYSFGVVLLEIITG 230
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 46/195 (23%)
Query: 345 VYRATIDGKVLAVKKI-----------KEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
VY+ ++ +AVKK+ K+ +E++++ + H NLV+L+G SSD +
Sbjct: 47 VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD-DL 105
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
LVY Y NGSL L L+W R ++A ANG+ ++HE+ +
Sbjct: 106 CLVYVYMPNGSLLDRLSCLDGTPP-------LSWHMRCKIAQGAANGINFLHENHH---I 155
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA----------------------APAT--NDVMPKF 489
HRDI++ NI LD F AKI++F LA AP ++ PK
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKS 215
Query: 490 DVFAFGVVLLELLSG 504
D+++FGVVLLE+++G
Sbjct: 216 DIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 46/195 (23%)
Query: 345 VYRATIDGKVLAVKKI-----------KEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
VY+ ++ +AVKK+ K+ +E++++ + H NLV+L+G SSD +
Sbjct: 41 VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD-DL 99
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
LVY Y NGSL L L+W R ++A ANG+ ++HE+ +
Sbjct: 100 CLVYVYMPNGSLLDRLSCLDGTPP-------LSWHMRCKIAQGAANGINFLHENHH---I 149
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA----------------------APAT--NDVMPKF 489
HRDI++ NI LD F AKI++F LA AP ++ PK
Sbjct: 150 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKS 209
Query: 490 DVFAFGVVLLELLSG 504
D+++FGVVLLE+++G
Sbjct: 210 DIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 46/195 (23%)
Query: 345 VYRATIDGKVLAVKKI-----------KEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
VY+ ++ +AVKK+ K+ +E+++ + H NLV+L+G SSD +
Sbjct: 38 VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGD-DL 96
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
LVY Y NGSL L L+W R ++A ANG+ ++HE+ +
Sbjct: 97 CLVYVYXPNGSLLDRLSCLDGTPP-------LSWHXRCKIAQGAANGINFLHENHH---I 146
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA----------------------APAT--NDVMPKF 489
HRDI++ NI LD F AKI++F LA AP ++ PK
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKS 206
Query: 490 DVFAFGVVLLELLSG 504
D+++FGVVLLE+++G
Sbjct: 207 DIYSFGVVLLEIITG 221
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 125/302 (41%), Gaps = 56/302 (18%)
Query: 330 ESTMNLSEHYSIGKSV----YRATI-DGKVLAVKKIKEDVTE-------ELRILQRINHA 377
E+T N + IG V Y+ + DG +A+K+ + ++ E+ L H
Sbjct: 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHP 95
Query: 378 NLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDV 437
+LV L+G D + L+Y+Y ENG+L + L+ + ++W QRL + +
Sbjct: 96 HLVSLIGFC-DERNEMILIYKYMENGNLKRHLY------GSDLPTMSMSWEQRLEICIGA 148
Query: 438 ANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT--------------- 482
A GL Y+H A I+HRD+++ NI LD F KI +F ++ T
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 483 ----------NDVMPKFDVFAFGVVLLELLSGKKATRTTENGKTAVLWKEIXXXX--XXX 530
+ K DV++FGVVL E+L + A + L +E+
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS-------LPREMVNLAEWAVE 258
Query: 531 XXXXXXXXNWMDPNLESFYPIDGALSLATLARACTMDKSLSRPNMAEVVFNLSVLTQSTE 590
+DPNL + A C S RP+M +V++ L + E
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
Query: 591 TL 592
++
Sbjct: 319 SV 320
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 125/302 (41%), Gaps = 56/302 (18%)
Query: 330 ESTMNLSEHYSIGKSV----YRATI-DGKVLAVKKIKEDVTE-------ELRILQRINHA 377
E+T N + IG V Y+ + DG +A+K+ + ++ E+ L H
Sbjct: 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHP 95
Query: 378 NLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDV 437
+LV L+G D + L+Y+Y ENG+L + L+ + ++W QRL + +
Sbjct: 96 HLVSLIGFC-DERNEMILIYKYMENGNLKRHLY------GSDLPTMSMSWEQRLEICIGA 148
Query: 438 ANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT--------------- 482
A GL Y+H A I+HRD+++ NI LD F KI +F ++ T
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 483 ----------NDVMPKFDVFAFGVVLLELLSGKKATRTTENGKTAVLWKEIXXXX--XXX 530
+ K DV++FGVVL E+L + A + L +E+
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS-------LPREMVNLAEWAVE 258
Query: 531 XXXXXXXXNWMDPNLESFYPIDGALSLATLARACTMDKSLSRPNMAEVVFNLSVLTQSTE 590
+DPNL + A C S RP+M +V++ L + E
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
Query: 591 TL 592
++
Sbjct: 319 SV 320
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 43/203 (21%)
Query: 333 MNLSEHYSIGK--SVYRATIDGKVLAVKKIKED------VTEELR---ILQRINHANLVK 381
+N+ E G +V+RA G +AVK + E V E LR I++R+ H N+V
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 382 LMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGL 441
MG + N +V EY GSL + LH L +RL +A DVA G+
Sbjct: 99 FMGAVTQPP-NLSIVTEYLSRGSLYRLLHKSGAREQ-------LDERRRLSMAYDVAKGM 150
Query: 442 QYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------APATNDVMP-- 487
Y+H P IVHRD+++ N+ +D ++ K+ +F L+ A T + M
Sbjct: 151 NYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPE 209
Query: 488 ---------KFDVFAFGVVLLEL 501
K DV++FGV+L EL
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 43/203 (21%)
Query: 333 MNLSEHYSIGK--SVYRATIDGKVLAVKKIKED------VTEELR---ILQRINHANLVK 381
+N+ E G +V+RA G +AVK + E V E LR I++R+ H N+V
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 382 LMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGL 441
MG + N +V EY GSL + LH L +RL +A DVA G+
Sbjct: 99 FMGAVTQPP-NLSIVTEYLSRGSLYRLLHKSGAREQ-------LDERRRLSMAYDVAKGM 150
Query: 442 QYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSL------------AAPATNDVMP-- 487
Y+H P IVHR++++ N+ +D ++ K+ +F L +A T + M
Sbjct: 151 NYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPE 209
Query: 488 ---------KFDVFAFGVVLLEL 501
K DV++FGV+L EL
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWEL 232
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 49/208 (23%)
Query: 343 KSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAEN 402
KS+ +G+ ++K +E E+ I+ +NH N+VKL G+ + +V E+
Sbjct: 50 KSLILGDSEGETEMIEKFQE-FQREVFIMSNLNHPNIVKLYGLMHNPPR---MVMEFVPC 105
Query: 403 GSLDKWL----HPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIR 458
G L L HP + WS +LR+ LD+A G++YM ++ P IVHRD+R
Sbjct: 106 GDLYHRLLDKAHP-------------IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLR 151
Query: 459 TNNIQLDSRFK-----AKIANFSLA-----------------APAT-----NDVMPKFDV 491
+ NI L S + AK+A+FSL+ AP T K D
Sbjct: 152 SPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADT 211
Query: 492 FAFGVVLLELLSGKKATRTTENGKTAVL 519
++F ++L +L+G+ GK +
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFI 239
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 42/223 (18%)
Query: 324 EIEVIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTE-----ELRILQRINHAN 378
EIEV E + + K+ +RA K +A+K+I+ + ELR L R+NH N
Sbjct: 10 EIEV--EEVVGRGAFGVVCKAKWRA----KDVAIKQIESESERKAFIVELRQLSRVNHPN 63
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL G + LV EYAE GSL LH + + T + + L +
Sbjct: 64 IVKLYGACLNPV---CLVMEYAEGGSLYNVLH-------GAEPLPYYTAAHAMSWCLQCS 113
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKA-KIANFSLA-----------------AP 480
G+ Y+H +++HRD++ N+ L + KI +F A AP
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAP 173
Query: 481 AT---NDVMPKFDVFAFGVVLLELLSGKKATRTTENGKTAVLW 520
++ K DVF++G++L E+++ +K ++W
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW 216
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 42/223 (18%)
Query: 324 EIEVIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTE-----ELRILQRINHAN 378
EIEV E + + K+ +RA K +A+K+I+ + ELR L R+NH N
Sbjct: 9 EIEV--EEVVGRGAFGVVCKAKWRA----KDVAIKQIESESERKAFIVELRQLSRVNHPN 62
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL G + LV EYAE GSL LH + + T + + L +
Sbjct: 63 IVKLYGACLNPV---CLVMEYAEGGSLYNVLH-------GAEPLPYYTAAHAMSWCLQCS 112
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKA-KIANFSLA-----------------AP 480
G+ Y+H +++HRD++ N+ L + KI +F A AP
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAP 172
Query: 481 AT---NDVMPKFDVFAFGVVLLELLSGKKATRTTENGKTAVLW 520
++ K DVF++G++L E+++ +K ++W
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 49/208 (23%)
Query: 343 KSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAEN 402
KS+ +G+ ++K +E E+ I+ +NH N+VKL G+ + +V E+
Sbjct: 50 KSLILGDSEGETEMIEKFQE-FQREVFIMSNLNHPNIVKLYGLMHNPPR---MVMEFVPC 105
Query: 403 GSLDKWL----HPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIR 458
G L L HP + WS +LR+ LD+A G++YM ++ P IVHRD+R
Sbjct: 106 GDLYHRLLDKAHP-------------IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLR 151
Query: 459 TNNIQLDSRFK-----AKIANFSLA-----------------APAT-----NDVMPKFDV 491
+ NI L S + AK+A+F L+ AP T K D
Sbjct: 152 SPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADT 211
Query: 492 FAFGVVLLELLSGKKATRTTENGKTAVL 519
++F ++L +L+G+ GK +
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFI 239
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 36/177 (20%)
Query: 352 GKVLAVKKIKEDVTE-----ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
G +AVK IK D T E ++ ++ H+NLV+L+GV + +G ++V EY GSL
Sbjct: 216 GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L L L+ +LDV ++Y+ + + VHRD+ N+ +
Sbjct: 276 DYLRSRGRS--------VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSE 324
Query: 467 RFKAKIANFSLA--APATNDV--MP----------------KFDVFAFGVVLLELLS 503
AK+++F L A +T D +P K DV++FG++L E+ S
Sbjct: 325 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 49/208 (23%)
Query: 343 KSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAEN 402
KS+ +G+ ++K +E E+ I+ +NH N+VKL G+ + +V E+
Sbjct: 50 KSLILGDSEGETEMIEKFQE-FQREVFIMSNLNHPNIVKLYGLMHNPPR---MVMEFVPC 105
Query: 403 GSLDKWL----HPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIR 458
G L L HP + WS +LR+ LD+A G++YM ++ P IVHRD+R
Sbjct: 106 GDLYHRLLDKAHP-------------IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLR 151
Query: 459 TNNIQLDSRFK-----AKIA-----------------NFSLAAPAT-----NDVMPKFDV 491
+ NI L S + AK+A NF AP T K D
Sbjct: 152 SPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADT 211
Query: 492 FAFGVVLLELLSGKKATRTTENGKTAVL 519
++F ++L +L+G+ GK +
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFI 239
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 36/177 (20%)
Query: 352 GKVLAVKKIKEDVTE-----ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
G +AVK IK D T E ++ ++ H+NLV+L+GV + +G ++V EY GSL
Sbjct: 35 GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 94
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L L L+ +LDV ++Y+ + + VHRD+ N+ +
Sbjct: 95 DYLRSRGRS--------VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSE 143
Query: 467 RFKAKIANFSLA--APATNDV--MP----------------KFDVFAFGVVLLELLS 503
AK+++F L A +T D +P K DV++FG++L E+ S
Sbjct: 144 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 36/177 (20%)
Query: 352 GKVLAVKKIKEDVTE-----ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
G +AVK IK D T E ++ ++ H+NLV+L+GV + +G ++V EY GSL
Sbjct: 44 GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L L L+ +LDV ++Y+ + + VHRD+ N+ +
Sbjct: 104 DYLRSRGRS--------VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSE 152
Query: 467 RFKAKIANFSLA--APATNDV--MP----------------KFDVFAFGVVLLELLS 503
AK+++F L A +T D +P K DV++FG++L E+ S
Sbjct: 153 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 36/177 (20%)
Query: 352 GKVLAVKKIKEDVTE-----ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
G +AVK IK D T E ++ ++ H+NLV+L+GV + +G ++V EY GSL
Sbjct: 29 GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L L L+ +LDV ++Y+ + + VHRD+ N+ +
Sbjct: 89 DYLRSRGRS--------VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSE 137
Query: 467 RFKAKIANFSLA--APATNDV--MP----------------KFDVFAFGVVLLELLS 503
AK+++F L A +T D +P K DV++FG++L E+ S
Sbjct: 138 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 54/225 (24%)
Query: 331 STMNLSEHYSIGK--SVYRATIDGKVLAVKKIKED-----------VTEELRILQRINHA 377
+ + L E IG VYRA G +AVK + D V +E ++ + H
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 378 NLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDV 437
N++ L GV + N LV E+A G L++ L I + W A+ +
Sbjct: 67 NIIALRGVCL-KEPNLCLVMEFARGGPLNRVLSGKRIPPD-----ILVNW------AVQI 114
Query: 438 ANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFK--------AKIANFSL-----------A 478
A G+ Y+H+ A I+HRD++++NI + + + KI +F L A
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA 174
Query: 479 APATNDVMPKF----------DVFAFGVVLLELLSGKKATRTTEN 513
A A + P+ DV+++GV+L ELL+G+ R +
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG 219
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 47/187 (25%)
Query: 352 GKVLAVKKIK--------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF-LVYEYAEN 402
G+ +AVK +K D+ +E+ IL+ + H N+VK G+ ++ GN L+ E+ +
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 403 GSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
GSL ++L + Q+L+ A+ + G+ Y+ VHRD+ N+
Sbjct: 110 GSLKEYLPKNKNK---------INLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNV 157
Query: 463 QLDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGV 496
++S + KI +F L D + KF DV++FGV
Sbjct: 158 LVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGV 217
Query: 497 VLLELLS 503
L ELL+
Sbjct: 218 TLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 47/187 (25%)
Query: 352 GKVLAVKKIK--------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF-LVYEYAEN 402
G+ +AVK +K D+ +E+ IL+ + H N+VK G+ ++ GN L+ E+ +
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 403 GSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
GSL ++L + Q+L+ A+ + G+ Y+ VHRD+ N+
Sbjct: 98 GSLKEYLPKNKNK---------INLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNV 145
Query: 463 QLDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGV 496
++S + KI +F L D + KF DV++FGV
Sbjct: 146 LVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGV 205
Query: 497 VLLELLS 503
L ELL+
Sbjct: 206 TLHELLT 212
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 63/274 (22%)
Query: 356 AVKKIKE--------DVTEELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
A+K++KE D EL +L ++ +H N++ L+G + + +G +L EYA +G+L
Sbjct: 56 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG-ACEHRGYLYLAIEYAPHGNLL 114
Query: 407 KWLHPXXXXXXXXXXVIF------LTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTN 460
+L I L+ Q L A DVA G+ Y+ +Q +HRD+
Sbjct: 115 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAAR 171
Query: 461 NIQLDSRFKAKIANFSLA------APATNDVMP----------------KFDVFAFGVVL 498
NI + + AKIA+F L+ T +P DV+++GV+L
Sbjct: 172 NILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231
Query: 499 LELLSGKKATRTTENGKT-AVLWKEIXXXXXXXXXXXXXXXNWMDPNLESFYPIDGALSL 557
E++S T G T A L++++ LE P++ +
Sbjct: 232 WEIVS---LGGTPYCGMTCAELYEKLPQGY----------------RLEK--PLNCDDEV 270
Query: 558 ATLARACTMDKSLSRPNMAEVVFNLSVLTQSTET 591
L R C +K RP+ A+++ +L+ + + +T
Sbjct: 271 YDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 63/274 (22%)
Query: 356 AVKKIKE--------DVTEELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
A+K++KE D EL +L ++ +H N++ L+G + + +G +L EYA +G+L
Sbjct: 46 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG-ACEHRGYLYLAIEYAPHGNLL 104
Query: 407 KWLHPXXXXXXXXXXVIF------LTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTN 460
+L I L+ Q L A DVA G+ Y+ +Q +HRD+
Sbjct: 105 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAAR 161
Query: 461 NIQLDSRFKAKIANFSLA------APATNDVMP----------------KFDVFAFGVVL 498
NI + + AKIA+F L+ T +P DV+++GV+L
Sbjct: 162 NILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 221
Query: 499 LELLSGKKATRTTENGKT-AVLWKEIXXXXXXXXXXXXXXXNWMDPNLESFYPIDGALSL 557
E++S T G T A L++++ LE P++ +
Sbjct: 222 WEIVS---LGGTPYCGMTCAELYEKLPQGY----------------RLEK--PLNCDDEV 260
Query: 558 ATLARACTMDKSLSRPNMAEVVFNLSVLTQSTET 591
L R C +K RP+ A+++ +L+ + + +T
Sbjct: 261 YDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 294
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQ 390
+ + L+ H GK V ID L +++ + E+RI++ +NH N+VKL V +++
Sbjct: 28 AKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEVI-ETE 85
Query: 391 GNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
+LV EYA G + +L F + + +QY H Q
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR----------QIVSAVQYCH---QK 132
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSL-------------------AAP----ATNDVMP 487
IVHRD++ N+ LD+ KIA+F AAP P
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 488 KFDVFAFGVVLLELLSG 504
+ DV++ GV+L L+SG
Sbjct: 193 EVDVWSLGVILYTLVSG 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQ 390
+ + L+ H GK V ID L +++ + E+RI++ +NH N+VKL V +++
Sbjct: 28 AKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEVI-ETE 85
Query: 391 GNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
+LV EYA G + +L F + + +QY H Q
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ----------IVSAVQYCH---QK 132
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSL-------------------AAP----ATNDVMP 487
IVHRD++ N+ LD+ KIA+F AAP P
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 488 KFDVFAFGVVLLELLSG 504
+ DV++ GV+L L+SG
Sbjct: 193 EVDVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQ 390
+ + L+ H GK V ID L +++ + E+RI++ +NH N+VKL V +++
Sbjct: 28 AKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEVI-ETE 85
Query: 391 GNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
+LV EYA G + +L F + + +QY H Q
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR----------QIVSAVQYCH---QK 132
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSL-------------------AAP----ATNDVMP 487
IVHRD++ N+ LD+ KIA+F AAP P
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 488 KFDVFAFGVVLLELLSG 504
+ DV++ GV+L L+SG
Sbjct: 193 EVDVWSLGVILYTLVSG 209
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQ 390
+ + L+ H GK V ID L +++ + E+RI++ +NH N+VKL V +++
Sbjct: 28 AKVKLARHILTGKEVAVRIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEVI-ETE 85
Query: 391 GNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
+LV EYA G + +L F + + +QY H Q
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR----------QIVSAVQYCH---QK 132
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSL-------------------AAP----ATNDVMP 487
IVHRD++ N+ LD+ KIA+F AAP P
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 488 KFDVFAFGVVLLELLSG 504
+ DV++ GV+L L+SG
Sbjct: 193 EVDVWSLGVILYTLVSG 209
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQ 390
+ + L+ H GK V ID L +++ + E+RI++ +NH N+VKL V +++
Sbjct: 28 AKVKLARHILTGKEVAVRIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEVI-ETE 85
Query: 391 GNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
+LV EYA G + +L F + + +QY H Q
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ----------IVSAVQYCH---QK 132
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSL-------------------AAP----ATNDVMP 487
IVHRD++ N+ LD+ KIA+F AAP P
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 488 KFDVFAFGVVLLELLSG 504
+ DV++ GV+L L+SG
Sbjct: 193 EVDVWSLGVILYTLVSG 209
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 30 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 88
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 139
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++Y+ A VHRD+ N LD +F K+A+F LA
Sbjct: 140 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGA 196
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 23 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 81
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 82 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 132
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++Y+ A VHRD+ N LD +F K+A+F LA
Sbjct: 133 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 189
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 190 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 84
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 135
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++Y+ A VHRD+ N LD +F K+A+F LA
Sbjct: 136 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 192
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 193 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 31 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 89
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 140
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++Y+ A VHRD+ N LD +F K+A+F LA
Sbjct: 141 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 197
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 29 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 87
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 138
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++Y+ A VHRD+ N LD +F K+A+F LA
Sbjct: 139 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 195
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 49 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 107
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 108 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 158
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++Y+ A VHRD+ N LD +F K+A+F LA
Sbjct: 159 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 215
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 216 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 50 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 108
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 109 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 159
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++Y+ A VHRD+ N LD +F K+A+F LA
Sbjct: 160 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 216
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 217 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 30 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 88
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 139
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++Y+ A VHRD+ N LD +F K+A+F LA
Sbjct: 140 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 196
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 28 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 86
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 87 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 137
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++Y+ A VHRD+ N LD +F K+A+F LA
Sbjct: 138 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 194
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 195 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 31 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 89
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 140
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++Y+ A VHRD+ N LD +F K+A+F LA
Sbjct: 141 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 197
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQ 390
+ + L+ H GK V ID L +++ + E+RI++ +NH N+VKL V +++
Sbjct: 21 AKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEVI-ETE 78
Query: 391 GNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
+LV EYA G + +L F + + +QY H Q
Sbjct: 79 KTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ----------IVSAVQYCH---QK 125
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSL-------------------AAP----ATNDVMP 487
IVHRD++ N+ LD+ KIA+F AAP P
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 185
Query: 488 KFDVFAFGVVLLELLSG 504
+ DV++ GV+L L+SG
Sbjct: 186 EVDVWSLGVILYTLVSG 202
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V EY ENGSLD +L
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKH 140
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 141 DAQ---------FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F LA +D KF DV+++G+VL E++S
Sbjct: 189 SDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 38/197 (19%)
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQ 390
+ + L+ H G+ V ID L +++ + E+RI++ +NH N+VKL V +++
Sbjct: 29 AKVKLARHVLTGREVAVKIIDKTQLNPTSLQK-LFREVRIMKILNHPNIVKLFEVI-ETE 86
Query: 391 GNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
+LV EYA G + +L F + + +QY H Q
Sbjct: 87 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ----------IVSAVQYCH---QK 133
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSL-------------------AAP----ATNDVMP 487
IVHRD++ N+ LD KIA+F AAP P
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGP 193
Query: 488 KFDVFAFGVVLLELLSG 504
+ DV++ GV+L L+SG
Sbjct: 194 EVDVWSLGVILYTLVSG 210
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 110/289 (38%), Gaps = 68/289 (23%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+VY+ G V AVK + + E+ +L++ H N++ MG S+ Q
Sbjct: 25 TVYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ--LA 81
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V ++ E SL LH + +A A G+ Y+H SI+H
Sbjct: 82 IVTQWCEGSSLYHHLHIIETKFEMIKLI---------DIARQTAQGMDYLHA---KSIIH 129
Query: 455 RDIRTNNIQLDSRFKAKIANFSLA----------------------APAT---NDVMP-- 487
RD+++NNI L KI +F LA AP D P
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 189
Query: 488 -KFDVFAFGVVLLELLSGKKATRTTENGKTAVLWKEIXXXXXXXXXXXXXXXNWMDPNLE 546
+ DV+AFG+VL EL++G+ N + ++ P+L
Sbjct: 190 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF---------------MVGRGYLSPDLS 234
Query: 547 SFYPIDGALSLATLARACTMDKSLSRPNMAEVVFNLSVLTQSTETLERS 595
+ ++ L C K RP +++ ++ +L +S + RS
Sbjct: 235 KVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRS 282
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 119/274 (43%), Gaps = 63/274 (22%)
Query: 356 AVKKIKE--------DVTEELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
A+K++KE D EL +L ++ +H N++ L+G + + +G +L EYA +G+L
Sbjct: 53 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG-ACEHRGYLYLAIEYAPHGNLL 111
Query: 407 KWLHPXXXXXXXXXXVIF------LTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTN 460
+L I L+ Q L A DVA G+ Y+ +Q +HR++
Sbjct: 112 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAAR 168
Query: 461 NIQLDSRFKAKIANFSLA------APATNDVMP----------------KFDVFAFGVVL 498
NI + + AKIA+F L+ T +P DV+++GV+L
Sbjct: 169 NILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 228
Query: 499 LELLSGKKATRTTENGKT-AVLWKEIXXXXXXXXXXXXXXXNWMDPNLESFYPIDGALSL 557
E++S T G T A L++++ LE P++ +
Sbjct: 229 WEIVS---LGGTPYCGMTCAELYEKLPQGY----------------RLEK--PLNCDDEV 267
Query: 558 ATLARACTMDKSLSRPNMAEVVFNLSVLTQSTET 591
L R C +K RP+ A+++ +L+ + + +T
Sbjct: 268 YDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 301
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQ 390
+ + L+ H GK V ID L +++ + E+RI + +NH N+VKL V +++
Sbjct: 28 AKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIXKVLNHPNIVKLFEVI-ETE 85
Query: 391 GNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
+LV EYA G + +L F + + +QY H Q
Sbjct: 86 KTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ----------IVSAVQYCH---QK 132
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSL-------------------AAP----ATNDVMP 487
IVHRD++ N+ LD+ KIA+F AAP P
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 488 KFDVFAFGVVLLELLSG 504
+ DV++ GV+L L+SG
Sbjct: 193 EVDVWSLGVILYTLVSG 209
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQ 390
+ + L+ H G+ V ID L +++ + E+RI++ +NH N+VKL V +++
Sbjct: 29 AKVKLARHILTGREVAIKIIDKTQLNPTSLQK-LFREVRIMKILNHPNIVKLFEVI-ETE 86
Query: 391 GNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
+L+ EYA G + +L F + + +QY H Q
Sbjct: 87 KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ----------IVSAVQYCH---QK 133
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSL-------------------AAP----ATNDVMP 487
IVHRD++ N+ LD+ KIA+F AAP P
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 488 KFDVFAFGVVLLELLSG 504
+ DV++ GV+L L+SG
Sbjct: 194 EVDVWSLGVILYTLVSG 210
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 99/257 (38%), Gaps = 58/257 (22%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E+ +L++ H N++ MG S+ Q +V ++ E SL LH +
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI---- 127
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-------- 478
+A A G+ Y+H SI+HRD+++NNI L KI +F LA
Sbjct: 128 -----DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 179
Query: 479 --------------APAT---NDVMP---KFDVFAFGVVLLELLSGKKATRTTENGKTAV 518
AP D P + DV+AFG+VL EL++G+ N +
Sbjct: 180 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 239
Query: 519 LWKEIXXXXXXXXXXXXXXXNWMDPNLESFYPIDGALSLATLARACTMDKSLSRPNMAEV 578
++ P+L + ++ L C K RP ++
Sbjct: 240 F---------------MVGRGYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQI 283
Query: 579 VFNLSVLTQSTETLERS 595
+ ++ +L +S + RS
Sbjct: 284 LASIELLARSLPKIHRS 300
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 148
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 199
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++++ A VHRD+ N LD +F K+A+F LA
Sbjct: 200 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 256
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 36 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 94
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 95 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 145
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++++ A VHRD+ N LD +F K+A+F LA
Sbjct: 146 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 202
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 203 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 32 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 90
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 141
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++++ A VHRD+ N LD +F K+A+F LA
Sbjct: 142 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGA 198
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 32 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 90
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 141
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++++ A VHRD+ N LD +F K+A+F LA
Sbjct: 142 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 198
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 31 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 89
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 140
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++++ A VHRD+ N LD +F K+A+F LA
Sbjct: 141 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 197
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQ 390
+ + L+ H G+ V ID L +++ + E+RI++ +NH N+VKL V +++
Sbjct: 26 AKVKLARHILTGREVAIKIIDKTQLNPTSLQK-LFREVRIMKILNHPNIVKLFEVI-ETE 83
Query: 391 GNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
+L+ EYA G + +L F + + +QY H Q
Sbjct: 84 KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ----------IVSAVQYCH---QK 130
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSL-------------------AAP----ATNDVMP 487
IVHRD++ N+ LD+ KIA+F AAP P
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 488 KFDVFAFGVVLLELLSG 504
+ DV++ GV+L L+SG
Sbjct: 191 EVDVWSLGVILYTLVSG 207
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 31 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 89
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 140
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++++ A VHRD+ N LD +F K+A+F LA
Sbjct: 141 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 197
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 321 IVYEIEVIMESTMNLSEHYSI----GKSVYRATID-GKVLAVKKIKEDVTEELRILQRIN 375
IV+ EVI H ++ GK ++ A ++ + ++ + +TE + I++ +
Sbjct: 29 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFS 87
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N++ L+G+ S+G+ +V Y ++G L ++ + F L
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF---------GL 138
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------- 478
VA G++++ A VHRD+ N LD +F K+A+F LA
Sbjct: 139 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 195
Query: 479 ----------APATNDVMPKFDVFAFGVVLLELLS 503
+ T K DV++FGV+L EL++
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V EY ENGSLD +L
Sbjct: 70 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKH 128
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 129 DAQ---------FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 176
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L+ +D KF DV+++G+VL E++S
Sbjct: 177 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V EY ENGSLD +L
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKH 140
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 141 DAQ---------FTVIQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKV 188
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L+ +D KF DV+++G+VL E++S
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V EY ENGSLD +L
Sbjct: 53 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKH 111
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 112 DAQ---------FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 159
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L+ +D KF DV+++G+VL E++S
Sbjct: 160 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V EY ENGSLD +L
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKH 140
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 141 DAQ---------FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L+ +D KF DV+++G+VL E++S
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V EY ENGSLD +L
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKH 140
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 141 DAQ---------FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L+ +D KF DV+++G+VL E++S
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V EY ENGSLD +L
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKH 140
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 141 DAQ---------FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L +D KF DV+++G+VL E++S
Sbjct: 189 SDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V EY ENGSLD +L
Sbjct: 80 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKH 138
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 139 DAQ---------FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 186
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L+ +D KF DV+++G+VL E++S
Sbjct: 187 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V EY ENGSLD +L
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKH 140
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 141 DAQ---------FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L+ +D KF DV+++G+VL E++S
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V EY ENGSLD +L
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKH 140
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 141 DAQ---------FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L+ +D KF DV+++G+VL E++S
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 109/288 (37%), Gaps = 68/288 (23%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+VY+ G V AVK + + E+ +L++ H N++ MG S+ Q
Sbjct: 28 TVYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ--LA 84
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V ++ E SL LH + +A A G+ Y+H SI+H
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKFEMIKLI---------DIARQTAQGMDYLHA---KSIIH 132
Query: 455 RDIRTNNIQLDSRFKAKIANFSLA----------------------APAT---NDVMP-- 487
RD+++NNI L KI +F LA AP D P
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 488 -KFDVFAFGVVLLELLSGKKATRTTENGKTAVLWKEIXXXXXXXXXXXXXXXNWMDPNLE 546
+ DV+AFG+VL EL++G+ N + ++ P+L
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF---------------MVGRGYLSPDLS 237
Query: 547 SFYPIDGALSLATLARACTMDKSLSRPNMAEVVFNLSVLTQSTETLER 594
+ ++ L C K RP +++ ++ +L +S + R
Sbjct: 238 KVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHR 284
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 52/199 (26%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+VY+ G V AVK + + E+ +L++ H N++ MG S+ Q
Sbjct: 23 TVYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ--LA 79
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V ++ E SL LH + +A A G+ Y+H SI+H
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMIKLI---------DIARQTAQGMDYLHAK---SIIH 127
Query: 455 RDIRTNNIQLDSRFKAKIANFSLA----------------------APAT---NDVMP-- 487
RD+++NNI L KI +F LA AP D P
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 488 -KFDVFAFGVVLLELLSGK 505
+ DV+AFG+VL EL++G+
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 52/199 (26%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+VY+ G V AVK + + E+ +L++ H N++ MG S+ Q
Sbjct: 23 TVYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ--LA 79
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V ++ E SL LH + +A A G+ Y+H SI+H
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMIKLI---------DIARQTAQGMDYLHAK---SIIH 127
Query: 455 RDIRTNNIQLDSRFKAKIANFSLA----------------------APAT---NDVMP-- 487
RD+++NNI L KI +F LA AP D P
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 488 -KFDVFAFGVVLLELLSGK 505
+ DV+AFG+VL EL++G+
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 42/167 (25%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E+ +L++ H N++ MG S+ Q +V ++ E SL LH
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHASETK---------FE 118
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-------- 478
+ + +A A G+ Y+H SI+HRD+++NNI L KI +F LA
Sbjct: 119 MKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 479 --------------APAT---NDVMP---KFDVFAFGVVLLELLSGK 505
AP D P + DV+AFG+VL EL++G+
Sbjct: 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 52/199 (26%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+VY+ G V AVK + + E+ +L++ H N++ MG S+ Q
Sbjct: 28 TVYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ--LA 84
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V ++ E SL LH + +A A G+ Y+H SI+H
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKFEMIKLI---------DIARQTAQGMDYLHAK---SIIH 132
Query: 455 RDIRTNNIQLDSRFKAKIANFSLA----------------------APAT---NDVMP-- 487
RD+++NNI L KI +F LA AP D P
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 488 -KFDVFAFGVVLLELLSGK 505
+ DV+AFG+VL EL++G+
Sbjct: 193 FQSDVYAFGIVLYELMTGQ 211
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 101/239 (42%), Gaps = 59/239 (24%)
Query: 306 QNKLLPGVSGYLGKPIVYEIEV--IMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIK-- 361
+NK+ P G +EIE +M ST S + +VY+ G V AVK +K
Sbjct: 16 KNKIRP--RGQRDSSYYWEIEASEVMLSTRIGSGSFG---TVYKGKWHGDV-AVKILKVV 69
Query: 362 -------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXX 414
+ E+ +L++ H N++ MG + + N +V ++ E SL K LH
Sbjct: 70 DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT--KDNLAIVTQWCEGSSLYKHLHVQET 127
Query: 415 XXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIAN 474
Q + +A A G+ Y+H +I+HRD+++NNI L KI +
Sbjct: 128 KFQMF---------QLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGD 175
Query: 475 FSLA----------------------APAT------NDVMPKFDVFAFGVVLLELLSGK 505
F LA AP N + DV+++G+VL EL++G+
Sbjct: 176 FGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 98/256 (38%), Gaps = 58/256 (22%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E+ +L++ H N++ MG S+ Q +V ++ E SL LH +
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI---- 135
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-------- 478
+A A G+ Y+H SI+HRD+++NNI L KI +F LA
Sbjct: 136 -----DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 187
Query: 479 --------------APAT---NDVMP---KFDVFAFGVVLLELLSGKKATRTTENGKTAV 518
AP D P + DV+AFG+VL EL++G+ N +
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 247
Query: 519 LWKEIXXXXXXXXXXXXXXXNWMDPNLESFYPIDGALSLATLARACTMDKSLSRPNMAEV 578
++ P+L + ++ L C K RP ++
Sbjct: 248 F---------------MVGRGYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQI 291
Query: 579 VFNLSVLTQSTETLER 594
+ ++ +L +S + R
Sbjct: 292 LASIELLARSLPKIHR 307
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 98/256 (38%), Gaps = 58/256 (22%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E+ +L++ H N++ MG S+ Q +V ++ E SL LH +
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI---- 135
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-------- 478
+A A G+ Y+H SI+HRD+++NNI L KI +F LA
Sbjct: 136 -----DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 187
Query: 479 --------------APAT---NDVMP---KFDVFAFGVVLLELLSGKKATRTTENGKTAV 518
AP D P + DV+AFG+VL EL++G+ N +
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 247
Query: 519 LWKEIXXXXXXXXXXXXXXXNWMDPNLESFYPIDGALSLATLARACTMDKSLSRPNMAEV 578
++ P+L + ++ L C K RP ++
Sbjct: 248 F---------------MVGRGYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQI 291
Query: 579 VFNLSVLTQSTETLER 594
+ ++ +L +S + R
Sbjct: 292 LASIELLARSLPKIHR 307
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 42/167 (25%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E+ +L++ H N++ MG S+ Q +V ++ E SL LH
Sbjct: 58 EVGVLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHASETK---------FE 106
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-------- 478
+ + +A A G+ Y+H SI+HRD+++NNI L KI +F LA
Sbjct: 107 MKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG 163
Query: 479 --------------APAT---NDVMP---KFDVFAFGVVLLELLSGK 505
AP D P + DV+AFG+VL EL++G+
Sbjct: 164 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 98/256 (38%), Gaps = 58/256 (22%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E+ +L++ H N++ MG S+ Q +V ++ E SL LH +
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLI---- 134
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-------- 478
+A A G+ Y+H SI+HRD+++NNI L KI +F LA
Sbjct: 135 -----DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 186
Query: 479 --------------APAT---NDVMP---KFDVFAFGVVLLELLSGKKATRTTENGKTAV 518
AP D P + DV+AFG+VL EL++G+ N +
Sbjct: 187 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 246
Query: 519 LWKEIXXXXXXXXXXXXXXXNWMDPNLESFYPIDGALSLATLARACTMDKSLSRPNMAEV 578
++ P+L + ++ L C K RP ++
Sbjct: 247 F---------------MVGRGYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQI 290
Query: 579 VFNLSVLTQSTETLER 594
+ ++ +L +S + R
Sbjct: 291 LASIELLARSLPKIHR 306
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 52/199 (26%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+VY+ G V AVK + + E+ +L++ H N++ MG S+ Q
Sbjct: 23 TVYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ--LA 79
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V ++ E SL LH + +A A G+ Y+H SI+H
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMIKLI---------DIARQTAQGMDYLHAK---SIIH 127
Query: 455 RDIRTNNIQLDSRFKAKIANFSLA----------------------APAT---NDVMP-- 487
RD+++NNI L KI +F LA AP D P
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 488 -KFDVFAFGVVLLELLSGK 505
+ DV+AFG+VL EL++G+
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 42/167 (25%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E+ +L++ H N++ MG S+ Q +V ++ E SL LH
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTAPQ--LAIVTQWCEGSSLYHHLHASETK---------FE 118
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-------- 478
+ + +A A G+ Y+H SI+HRD+++NNI L KI +F LA
Sbjct: 119 MKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 479 --------------APAT---NDVMP---KFDVFAFGVVLLELLSGK 505
AP D P + DV+AFG+VL EL++G+
Sbjct: 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 333 MNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGN 392
+ L+ H + G+ V I+ KVLA ++ + E+ L+ + H +++KL V S+
Sbjct: 29 VKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-SKDE 87
Query: 393 RFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSI 452
+V EYA N D + ++ + R + + ++Y H H I
Sbjct: 88 IIMVIEYAGNELFDYIVQRDK-----------MSEQEARRFFQQIISAVEYCHRH---KI 133
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFDVFAFGVVLLELLSGK 505
VHRD++ N+ LD KIA+F L+ T+ K + E++SGK
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 186
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 333 MNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGN 392
+ L+ H + G+ V I+ KVLA ++ + E+ L+ + H +++KL V S+
Sbjct: 24 VKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-SKDE 82
Query: 393 RFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSI 452
+V EYA N D + ++ + R + + ++Y H H I
Sbjct: 83 IIMVIEYAGNELFDYIVQRDK-----------MSEQEARRFFQQIISAVEYCHRH---KI 128
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFDVFAFGVVLLELLSGK 505
VHRD++ N+ LD KIA+F L+ T+ K + E++SGK
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 181
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 333 MNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGN 392
+ L+ H + G+ V I+ KVLA ++ + E+ L+ + H +++KL V S+
Sbjct: 30 VKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-SKDE 88
Query: 393 RFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSI 452
+V EYA N D + ++ + R + + ++Y H H I
Sbjct: 89 IIMVIEYAGNELFDYIVQRDK-----------MSEQEARRFFQQIISAVEYCHRH---KI 134
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFDVFAFGVVLLELLSGK 505
VHRD++ N+ LD KIA+F L+ T+ K + E++SGK
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 187
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 333 MNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGN 392
+ L+ H + G+ V I+ KVLA ++ + E+ L+ + H +++KL V S+
Sbjct: 20 VKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-SKDE 78
Query: 393 RFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSI 452
+V EYA N D + ++ + R + + ++Y H H I
Sbjct: 79 IIMVIEYAGNELFDYIVQRDK-----------MSEQEARRFFQQIISAVEYCHRH---KI 124
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFDVFAFGVVLLELLSGK 505
VHRD++ N+ LD KIA+F L+ T+ K + E++SGK
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 177
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 40/192 (20%)
Query: 351 DGKVLAVKKIKE-------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENG 403
D ++AVK +K+ D E +L + H ++VK GV + +V+EY ++G
Sbjct: 42 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD-PLIMVFEYMKHG 100
Query: 404 SLDKWLH---PXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTN 460
L+K+L P LT SQ L +A +A G+ Y+ A VHRD+ T
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATR 157
Query: 461 NIQLDSRFKAKIANFSLA---------------------APATNDVMPKF----DVFAFG 495
N + KI +F ++ P + + KF DV++ G
Sbjct: 158 NCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG 217
Query: 496 VVLLELLS-GKK 506
VVL E+ + GK+
Sbjct: 218 VVLWEIFTYGKQ 229
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 46/218 (21%)
Query: 319 KPIVYEIEVIMESTMNLSEHYSIGKS--VYRATIDGKV-LAVKKIKED------VTEELR 369
KP + + T+ L E G++ V+ +G +AVK +K+ E
Sbjct: 1 KPWWEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN 60
Query: 370 ILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQ 429
+++++ H LV+L V + Q +++ EY ENGSL +L I LT ++
Sbjct: 61 LMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSG--------IKLTINK 110
Query: 430 RLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-----APATND 484
L +A +A G+ ++ E + +HRD+R NI + KIA+F LA A T
Sbjct: 111 LLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAR 167
Query: 485 VMPKF-------------------DVFAFGVVLLELLS 503
KF DV++FG++L E+++
Sbjct: 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 130 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 177
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 178 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 237
Query: 498 LLELLS 503
L EL +
Sbjct: 238 LYELFT 243
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 43/197 (21%)
Query: 349 TIDGKVLAVKKIKE-------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAE 401
T D ++AVK +K+ D E +L + H ++VK GV D +V+EY +
Sbjct: 42 TKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD-PLIMVFEYMK 100
Query: 402 NGSLDKWLHPXXXXXXX------XXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHR 455
+G L+K+L L SQ L +A +A+G+ Y+ A VHR
Sbjct: 101 HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHR 157
Query: 456 DIRTNNIQLDSRFKAKIANFSLA---------------------APATNDVMPKF----D 490
D+ T N + + KI +F ++ P + + KF D
Sbjct: 158 DLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD 217
Query: 491 VFAFGVVLLELLS-GKK 506
V++FGV+L E+ + GK+
Sbjct: 218 VWSFGVILWEIFTYGKQ 234
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 99 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 146
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 147 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 206
Query: 498 LLELLS 503
L EL +
Sbjct: 207 LYELFT 212
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 41/174 (23%)
Query: 355 LAVKKIKEDVTEELR--------ILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+A+K +K TE+ R I+ + +H N+++L GV S + ++ EY ENG+LD
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK-PMMIITEYMENGALD 134
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
K+L V L +A G++Y+ A + VHRD+ NI ++S
Sbjct: 135 KFLREKDGEFSVLQLVGMLR---------GIAAGMKYL---ANMNYVHRDLAARNILVNS 182
Query: 467 RFKAKIANFSLAAPATNDVMPKFDVFAFGVVLLELLSGKKATRTTENGKTAVLW 520
K+++F L+ +D +AT TT GK + W
Sbjct: 183 NLVCKVSDFGLSRVLEDD--------------------PEATYTTSGGKIPIRW 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 104 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 151
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 152 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 211
Query: 498 LLELLS 503
L EL +
Sbjct: 212 LYELFT 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 117 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 164
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 165 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 224
Query: 498 LLELLS 503
L EL +
Sbjct: 225 LYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 97 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 144
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 145 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 204
Query: 498 LLELLS 503
L EL +
Sbjct: 205 LYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 102 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 149
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 150 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 209
Query: 498 LLELLS 503
L EL +
Sbjct: 210 LYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 117 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 164
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 165 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 224
Query: 498 LLELLS 503
L EL +
Sbjct: 225 LYELFT 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 99 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 146
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 147 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 206
Query: 498 LLELLS 503
L EL +
Sbjct: 207 LYELFT 212
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 43/182 (23%)
Query: 355 LAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKW 408
+A+K I+E D EE ++ +++H LV+L GV + Q LV+E+ E+G L +
Sbjct: 34 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDY 92
Query: 409 LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF 468
L L + LDV G+ Y+ E S++HRD+ N +
Sbjct: 93 LRTQRGLFAAETL---------LGMCLDVCEGMAYLEE---ASVIHRDLAARNCLVGENQ 140
Query: 469 KAKIANFSLA--------APATNDVMP----------------KFDVFAFGVVLLELLSG 504
K+++F + +T P K DV++FGV++ E+ S
Sbjct: 141 VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 200
Query: 505 KK 506
K
Sbjct: 201 GK 202
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 99 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 146
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 147 VENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 206
Query: 498 LLELLS 503
L EL +
Sbjct: 207 LYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 105 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 152
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 153 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 212
Query: 498 LLELLS 503
L EL +
Sbjct: 213 LYELFT 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 98 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 145
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 146 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 205
Query: 498 LLELLS 503
L EL +
Sbjct: 206 LYELFT 211
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 106 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 153
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 154 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 213
Query: 498 LLELLS 503
L EL +
Sbjct: 214 LYELFT 219
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 102 SLRDYLQAHAER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 149
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 150 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 209
Query: 498 LLELLS 503
L EL +
Sbjct: 210 LYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 103 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 150
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 151 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 210
Query: 498 LLELLS 503
L EL +
Sbjct: 211 LYELFT 216
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 43/179 (24%)
Query: 355 LAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKW 408
+AVK IKE + +E + + +++H LVK GV S + ++V EY NG L +
Sbjct: 35 VAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS-KEYPIYIVTEYISNGCLLNY 93
Query: 409 LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF 468
L L SQ L + DV G+ ++ H +HRD+ N +D
Sbjct: 94 LRSHGKG---------LEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDL 141
Query: 469 KAKIANFSLAAPATND-----VMPKF-------------------DVFAFGVVLLELLS 503
K+++F + +D V KF DV+AFG+++ E+ S
Sbjct: 142 CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 15 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 73
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 74 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLK--------TPSGIKLTINKLLDMA 123
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HRD+R NI + KIA+F LA
Sbjct: 124 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 180
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 181 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V E ENGSLD +L
Sbjct: 53 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEXMENGSLDSFLRKH 111
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 112 DAQ---------FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 159
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L+ +D KF DV+++G+VL E++S
Sbjct: 160 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 16 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 74
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 75 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLK--------TPSGIKLTINKLLDMA 124
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HRD+R NI + KIA+F LA
Sbjct: 125 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 181
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 182 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 13 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 71
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 72 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLK--------TPSGIKLTINKLLDMA 121
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HRD+R NI + KIA+F LA
Sbjct: 122 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 178
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V E ENGSLD +L
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEXMENGSLDSFLRKH 140
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 141 DAQ---------FTVIQLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKV 188
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L+ +D KF DV+++G+VL E++S
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 17 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 75
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 76 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLK--------TPSGIKLTINKLLDMA 125
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HRD+R NI + KIA+F LA
Sbjct: 126 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 182
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 183 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 43/182 (23%)
Query: 355 LAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKW 408
+A+K IKE D EE ++ +++H LV+L GV + Q LV+E+ E+G L +
Sbjct: 54 VAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDY 112
Query: 409 LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF 468
L L + LDV G+ Y+ E ++HRD+ N +
Sbjct: 113 LRTQRGLFAAETL---------LGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQ 160
Query: 469 KAKIANFSLA--------APATNDVMP----------------KFDVFAFGVVLLELLSG 504
K+++F + +T P K DV++FGV++ E+ S
Sbjct: 161 VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 220
Query: 505 KK 506
K
Sbjct: 221 GK 222
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+++L GV + S+ +V E ENGSLD +L
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEXMENGSLDSFLRKH 140
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A+G++Y+ + VHRD+ NI ++S K+
Sbjct: 141 DAQ---------FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L+ +D KF DV+++G+VL E++S
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 7 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 66 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLK--------TPSGIKLTINKLLDMA 115
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HRD+R NI + KIA+F LA
Sbjct: 116 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 172
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 13 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 71
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 72 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSG--------IKLTINKLLDMA 121
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HRD+R NI + KIA+F LA
Sbjct: 122 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 178
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 9 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 67
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 68 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSG--------IKLTINKLLDMA 117
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HRD+R NI + KIA+F LA
Sbjct: 118 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 174
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 175 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 12 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 70
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 71 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSG--------IKLTINKLLDMA 120
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HRD+R NI + KIA+F LA
Sbjct: 121 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 177
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 178 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 7 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 66 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSG--------IKLTINKLLDMA 115
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HRD+R NI + KIA+F LA
Sbjct: 116 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 172
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 45/199 (22%)
Query: 353 KVLAVKKIKE-----DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDK 407
K+L +KI+ + E++ L+ H +++KL V S + + F+V EY G L
Sbjct: 47 KILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS-TPSDIFMVMEYVSGGELFD 105
Query: 408 WLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
++ L + R+ + +G+ Y H H +VHRD++ N+ LD+
Sbjct: 106 YICKNGR----------LDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAH 152
Query: 468 FKAKIANFSL-------------------AAPATND----VMPKFDVFAFGVVLLELLSG 504
AKIA+F L AAP P+ D+++ GV+L LL G
Sbjct: 153 MNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCG 212
Query: 505 KKATRTTENGKTAVLWKEI 523
T ++ L+K+I
Sbjct: 213 ---TLPFDDDHVPTLFKKI 228
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 2 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 60
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 61 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSG--------IKLTINKLLDMA 110
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HRD+R NI + KIA+F LA
Sbjct: 111 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 167
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 168 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 7 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 66 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSG--------IKLTINKLLDMA 115
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HRD+R NI + KIA+F LA
Sbjct: 116 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 172
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 8 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 66
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 67 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSG--------IKLTINKLLDMA 116
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HRD+R NI + KIA+F LA
Sbjct: 117 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 173
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 174 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ E+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL ++L + + L+ + G++Y+ +HRD+ T NI
Sbjct: 102 SLREYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL 149
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 150 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 209
Query: 498 LLELLS 503
L EL +
Sbjct: 210 LYELFT 215
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 54/225 (24%)
Query: 318 GKPIVYEIEVIMESTMNLSE-HYS-IGKSVYRATIDG--KVLAVKKIKEDV--------T 365
G P V+ + ++ +L E H+ + Y T DG +++AVK +K D
Sbjct: 23 GDPTVFH-KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWK 81
Query: 366 EELRILQRINHANLVKLMGVSSDSQGNRF-LVYEYAENGSLDKWLHPXXXXXXXXXXVIF 424
+E+ IL+ + H +++K G D+ LV EY GSL +L P
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHS---------- 130
Query: 425 LTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSL--AAPAT 482
+ +Q L A + G+ Y+H AQ +HRD+ N+ LD+ KI +F L A P
Sbjct: 131 IGLAQLLLFAQQICEGMAYLH--AQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187
Query: 483 NDVM--------PKF----------------DVFAFGVVLLELLS 503
++ P F DV++FGV L ELL+
Sbjct: 188 HEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 47/203 (23%)
Query: 346 YRATIDGKVLAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
+R D +A+K IKE + EE +++ ++H LV+L GV + Q F++ EY
Sbjct: 30 WRGQYD---VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRPIFIITEY 85
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
NG L +L F T Q L + DV ++Y+ +HRD+
Sbjct: 86 MANGCLLNYLREMRHR--------FQT-QQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 133
Query: 460 NNIQLDSRFKAKIANFSLAAPATND-----VMPKF-------------------DVFAFG 495
N ++ + K+++F L+ +D V KF D++AFG
Sbjct: 134 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 193
Query: 496 VVLLELLS-GKKATRTTENGKTA 517
V++ E+ S GK N +TA
Sbjct: 194 VLMWEIYSLGKMPYERFTNSETA 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 47/203 (23%)
Query: 346 YRATIDGKVLAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
+R D +A+K IKE + EE +++ ++H LV+L GV + Q F++ EY
Sbjct: 45 WRGQYD---VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRPIFIITEY 100
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
NG L +L F T Q L + DV ++Y+ +HRD+
Sbjct: 101 MANGCLLNYLREMRHR--------FQT-QQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 148
Query: 460 NNIQLDSRFKAKIANFSLAAPATND-----VMPKF-------------------DVFAFG 495
N ++ + K+++F L+ +D V KF D++AFG
Sbjct: 149 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 496 VVLLELLS-GKKATRTTENGKTA 517
V++ E+ S GK N +TA
Sbjct: 209 VLMWEIYSLGKMPYERFTNSETA 231
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 47/203 (23%)
Query: 346 YRATIDGKVLAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
+R D +A+K IKE + EE +++ ++H LV+L GV + Q F++ EY
Sbjct: 36 WRGQYD---VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRPIFIITEY 91
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
NG L +L F T Q L + DV ++Y+ +HRD+
Sbjct: 92 MANGCLLNYLREMRHR--------FQT-QQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 139
Query: 460 NNIQLDSRFKAKIANFSLAAPATND-----VMPKF-------------------DVFAFG 495
N ++ + K+++F L+ +D V KF D++AFG
Sbjct: 140 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 199
Query: 496 VVLLELLS-GKKATRTTENGKTA 517
V++ E+ S GK N +TA
Sbjct: 200 VLMWEIYSLGKMPYERFTNSETA 222
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 43/182 (23%)
Query: 355 LAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKW 408
+A+K I+E D EE ++ +++H LV+L GV + Q LV+E+ E+G L +
Sbjct: 34 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDY 92
Query: 409 LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF 468
L L + LDV G+ Y+ E ++HRD+ N +
Sbjct: 93 LRTQRGLFAAETL---------LGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQ 140
Query: 469 KAKIANFSLA--------APATNDVMP----------------KFDVFAFGVVLLELLSG 504
K+++F + +T P K DV++FGV++ E+ S
Sbjct: 141 VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 200
Query: 505 KK 506
K
Sbjct: 201 GK 202
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 47/203 (23%)
Query: 346 YRATIDGKVLAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
+R D +A+K IKE + EE +++ ++H LV+L GV + Q F++ EY
Sbjct: 29 WRGQYD---VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRPIFIITEY 84
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
NG L +L F T Q L + DV ++Y+ +HRD+
Sbjct: 85 MANGCLLNYLREMRHR--------FQT-QQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 132
Query: 460 NNIQLDSRFKAKIANFSLAAPATND-----VMPKF-------------------DVFAFG 495
N ++ + K+++F L+ +D V KF D++AFG
Sbjct: 133 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 192
Query: 496 VVLLELLS-GKKATRTTENGKTA 517
V++ E+ S GK N +TA
Sbjct: 193 VLMWEIYSLGKMPYERFTNSETA 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 47/203 (23%)
Query: 346 YRATIDGKVLAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
+R D +A+K IKE + EE +++ ++H LV+L GV + Q F++ EY
Sbjct: 45 WRGQYD---VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRPIFIITEY 100
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
NG L +L F T Q L + DV ++Y+ +HRD+
Sbjct: 101 MANGCLLNYLREMRHR--------FQT-QQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 148
Query: 460 NNIQLDSRFKAKIANFSLAAPATND-----VMPKF-------------------DVFAFG 495
N ++ + K+++F L+ +D V KF D++AFG
Sbjct: 149 RNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 496 VVLLELLS-GKKATRTTENGKTA 517
V++ E+ S GK N +TA
Sbjct: 209 VLMWEIYSLGKMPYERFTNSETA 231
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 44/194 (22%)
Query: 355 LAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKW 408
+A+K IKE + EE +++ ++H LV+L GV + Q F++ EY NG L +
Sbjct: 31 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRPIFIITEYMANGCLLNY 89
Query: 409 LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF 468
L F T Q L + DV ++Y+ +HRD+ N ++ +
Sbjct: 90 LREMRHR--------FQT-QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQG 137
Query: 469 KAKIANFSLAAPATND-----VMPKF-------------------DVFAFGVVLLELLS- 503
K+++F L+ +D V KF D++AFGV++ E+ S
Sbjct: 138 VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 197
Query: 504 GKKATRTTENGKTA 517
GK N +TA
Sbjct: 198 GKMPYERFTNSETA 211
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 43/182 (23%)
Query: 355 LAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKW 408
+A+K I+E D EE ++ +++H LV+L GV + Q LV+E+ E+G L +
Sbjct: 32 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDY 90
Query: 409 LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF 468
L L + LDV G+ Y+ E ++HRD+ N +
Sbjct: 91 LRTQRGLFAAETL---------LGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQ 138
Query: 469 KAKIANFSLAAPATND------------------------VMPKFDVFAFGVVLLELLSG 504
K+++F + +D K DV++FGV++ E+ S
Sbjct: 139 VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 198
Query: 505 KK 506
K
Sbjct: 199 GK 200
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 43/182 (23%)
Query: 355 LAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKW 408
+A+K I+E D EE ++ +++H LV+L GV + Q LV+E+ E+G L +
Sbjct: 37 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDY 95
Query: 409 LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF 468
L L + LDV G+ Y+ E ++HRD+ N +
Sbjct: 96 LRTQRGLFAAETL---------LGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQ 143
Query: 469 KAKIANFSLA--------APATNDVMP----------------KFDVFAFGVVLLELLSG 504
K+++F + +T P K DV++FGV++ E+ S
Sbjct: 144 VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 203
Query: 505 KK 506
K
Sbjct: 204 GK 205
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 26/146 (17%)
Query: 355 LAVKKIKE--------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+AVK +KE D+ E +L+++NH +++KL G S G L+ EYA+ GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS-QDGPLLLIVEYAKYGSLR 114
Query: 407 KWLHPXXXXXXXXXXVIF--------------LTWSQRLRVALDVANGLQYMHEHAQPSI 452
+L LT + A ++ G+QY+ A+ S+
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSL 171
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA 478
VHRD+ NI + K KI++F L+
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 47/183 (25%)
Query: 355 LAVKKIKEDVTEELR--------ILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+A+K +K TE R I+ + +H N+++L GV + + +V EY ENGSLD
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR-LAMIVTEYMENGSLD 138
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L T Q + + V G++Y+ + VHRD+ N+ +DS
Sbjct: 139 TFLRTHDGQ---------FTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDS 186
Query: 467 RFKAKIANFSLAAPATNDVMPKF--------------------------DVFAFGVVLLE 500
K+++F L+ +D + DV++FGVV+ E
Sbjct: 187 NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 501 LLS 503
+L+
Sbjct: 247 VLA 249
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 47/183 (25%)
Query: 355 LAVKKIKEDVTEELR--------ILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+A+K +K TE R I+ + +H N+++L GV + + +V EY ENGSLD
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR-LAMIVTEYMENGSLD 138
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L T Q + + V G++Y+ + VHRD+ N+ +DS
Sbjct: 139 TFLRTHDGQ---------FTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDS 186
Query: 467 RFKAKIANFSL----------AAPATNDVMP----------------KFDVFAFGVVLLE 500
K+++F L A T +P DV++FGVV+ E
Sbjct: 187 NLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 501 LLS 503
+L+
Sbjct: 247 VLA 249
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 43/193 (22%)
Query: 349 TIDGKVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEY 399
T + +AVK +KE T EL+IL I +H N+V L+G + G ++ E+
Sbjct: 54 TATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 113
Query: 400 AENGSLDKWLHPXXXXXXXXXXVI--FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDI 457
+ G+L +L + FLT + + VA G++++ A +HRD+
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDL 170
Query: 458 RTNNIQLDSRFKAKIANFSLAAPATNDVMPKF---------------------------D 490
NI L + KI +F LA D P + D
Sbjct: 171 AARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDARLPLKWMAPETIFDRVYTIQSD 228
Query: 491 VFAFGVVLLELLS 503
V++FGV+L E+ S
Sbjct: 229 VWSFGVLLWEIFS 241
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 42/194 (21%)
Query: 351 DGKVLAVKKIKE-------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENG 403
D ++AVK +KE D E +L + H ++V+ GV ++ + +V+EY +G
Sbjct: 70 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR-PLLMVFEYMRHG 128
Query: 404 SLDKWLH---PXXXXXXXXXXVIF--LTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIR 458
L+++L P V L Q L VA VA G+ Y+ A VHRD+
Sbjct: 129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA 185
Query: 459 TNNIQLDSRFKAKIANFSLA---------------------APATNDVMPKF----DVFA 493
T N + KI +F ++ P + + KF DV++
Sbjct: 186 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 245
Query: 494 FGVVLLELLS-GKK 506
FGVVL E+ + GK+
Sbjct: 246 FGVVLWEIFTYGKQ 259
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 43/193 (22%)
Query: 349 TIDGKVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEY 399
T + +AVK +KE T EL+IL I +H N+V L+G + G ++ E+
Sbjct: 54 TATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 113
Query: 400 AENGSLDKWLHPXXXXXXXXXXVI--FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDI 457
+ G+L +L + FLT + + VA G++++ A +HRD+
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDL 170
Query: 458 RTNNIQLDSRFKAKIANFSLAAPATNDVMPKF---------------------------D 490
NI L + KI +F LA D P + D
Sbjct: 171 AARNILLSEKNVVKIXDFGLARDIYKD--PDYVRKGDARLPLKWMAPETIFDRVYTIQSD 228
Query: 491 VFAFGVVLLELLS 503
V++FGV+L E+ S
Sbjct: 229 VWSFGVLLWEIFS 241
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKEDVTEELR-------ILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G+V+AVKK++ E LR IL+ + H N+VK GV S + N L+ EY G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
SL +L + + L+ + G++Y+ +HR++ T NI
Sbjct: 100 SLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNIL 147
Query: 464 LDSRFKAKIANFSLAAPATND----------------------VMPKF----DVFAFGVV 497
+++ + KI +F L D KF DV++FGVV
Sbjct: 148 VENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 207
Query: 498 LLELLS 503
L EL +
Sbjct: 208 LYELFT 213
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 47/203 (23%)
Query: 346 YRATIDGKVLAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
+R D +A+K IKE + EE +++ ++H LV+L GV + Q F++ EY
Sbjct: 30 WRGQYD---VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRPIFIITEY 85
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
NG L +L F T Q L + DV ++Y+ +HRD+
Sbjct: 86 MANGCLLNYLREMRHR--------FQT-QQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 133
Query: 460 NNIQLDSRFKAKIANFSLAAPATND--------------------VMPKF----DVFAFG 495
N ++ + K+++F L+ +D + KF D++AFG
Sbjct: 134 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 193
Query: 496 VVLLELLS-GKKATRTTENGKTA 517
V++ E+ S GK N +TA
Sbjct: 194 VLMWEIYSLGKMPYERFTNSETA 216
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 42/194 (21%)
Query: 351 DGKVLAVKKIKE-------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENG 403
D ++AVK +KE D E +L + H ++V+ GV ++ + +V+EY +G
Sbjct: 47 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR-PLLMVFEYMRHG 105
Query: 404 SLDKWLH---PXXXXXXXXXXVIF--LTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIR 458
L+++L P V L Q L VA VA G+ Y+ A VHRD+
Sbjct: 106 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA 162
Query: 459 TNNIQLDSRFKAKIANFSLA---------------------APATNDVMPKF----DVFA 493
T N + KI +F ++ P + + KF DV++
Sbjct: 163 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 222
Query: 494 FGVVLLELLS-GKK 506
FGVVL E+ + GK+
Sbjct: 223 FGVVLWEIFTYGKQ 236
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 345 VYRATIDGKVLAVK----KIKEDVTEELRILQR--INHANLVKLMGV---SSDSQGNRFL 395
V++A + +AVK + K+ E I + H NL++ + S+ + +L
Sbjct: 31 VWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWL 90
Query: 396 VYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHA------- 448
+ + + GSL +L +TW++ VA ++ GL Y+HE
Sbjct: 91 ITAFHDKGSLTDYLKGN-----------IITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 449 -QPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------------APAT--- 482
+PSI HRD ++ N+ L S A +A+F LA AP
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEG 199
Query: 483 -----NDVMPKFDVFAFGVVLLELLSGKKAT 508
D + D++A G+VL EL+S KA
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWELVSRCKAA 230
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 42/194 (21%)
Query: 351 DGKVLAVKKIKE-------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENG 403
D ++AVK +KE D E +L + H ++V+ GV ++ + +V+EY +G
Sbjct: 41 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR-PLLMVFEYMRHG 99
Query: 404 SLDKWLH---PXXXXXXXXXXVIF--LTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIR 458
L+++L P V L Q L VA VA G+ Y+ A VHRD+
Sbjct: 100 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA 156
Query: 459 TNNIQLDSRFKAKIANFSLA---------------------APATNDVMPKF----DVFA 493
T N + KI +F ++ P + + KF DV++
Sbjct: 157 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 216
Query: 494 FGVVLLELLS-GKK 506
FGVVL E+ + GK+
Sbjct: 217 FGVVLWEIFTYGKQ 230
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 106/268 (39%), Gaps = 69/268 (25%)
Query: 359 KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXX 418
K + D E I+ + +H N++ L GV + + ++ EY ENGSLD +L
Sbjct: 51 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKNDGR--- 106
Query: 419 XXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
T Q + + + +G++Y+ + S VHRD+ NI ++S K+++F ++
Sbjct: 107 ------FTVIQLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMS 157
Query: 479 APATND----------------------VMPKF----DVFAFGVVLLELLS-GKKATRTT 511
+D KF DV+++G+V+ E++S G++
Sbjct: 158 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 217
Query: 512 ENGKTAVLWKEIXXXXXXXXXXXXXXXNWMDPNLESFY----PIDGALSLATLARACTMD 567
N +E Y P+D ++L L C
Sbjct: 218 SNQDVI-------------------------KAIEEGYRLPPPMDCPIALHQLMLDCWQK 252
Query: 568 KSLSRPNMAEVVFNLSVLTQSTETLERS 595
+ RP ++V L L ++ +L+R+
Sbjct: 253 ERSDRPKFGQIVNMLDKLIRNPNSLKRT 280
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 49/184 (26%)
Query: 366 EELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXXVIF 424
EE+ +L+ ++H N++KL D + N +LV E + G L D+ +H +I
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKR-NYYLVMECYKGGELFDEIIHRMKFNEVDAAVII- 142
Query: 425 LTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLAAPA 481
V +G+ Y+H+H +IVHRD++ N+ L+S+ K KI +F L+A
Sbjct: 143 ----------KQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189
Query: 482 TND------------VMP---------KFDVFAFGVVLLELLSG---------KKATRTT 511
N + P K DV++ GV+L LL+G ++ R
Sbjct: 190 ENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249
Query: 512 ENGK 515
E GK
Sbjct: 250 EKGK 253
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 39/177 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N++ L GV + S+ +V EY ENGSLD +L
Sbjct: 59 KVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSK-PVMIVTEYMENGSLDTFLKKN 117
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + ++ G++Y+ + VHRD+ NI ++S K+
Sbjct: 118 DGQ---------FTVIQLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKV 165
Query: 473 ANFSLAAPATND----------------------VMPKF----DVFAFGVVLLELLS 503
++F L+ +D KF DV+++G+V+ E++S
Sbjct: 166 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 27/157 (17%)
Query: 344 SVYRATIDGKVLAVKKI----KEDVTEELRILQ--RINHANLVKLM----GVSSDSQGNR 393
+VY+ ++D + +AVK +++ E I + + H N+ + + V++D +
Sbjct: 28 AVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMH------EH 447
LV EY NGSL K+L W R+A V GL Y+H +H
Sbjct: 88 LLVMEYYPNGSLXKYLSLHTS-----------DWVSSCRLAHSVTRGLAYLHTELPRGDH 136
Query: 448 AQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+P+I HRD+ + N+ + + I++F L+ T +
Sbjct: 137 YKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 84/209 (40%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ ++NH N+V+
Sbjct: 55 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 113
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 114 IGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 106/268 (39%), Gaps = 69/268 (25%)
Query: 359 KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXX 418
K + D E I+ + +H N++ L GV + + ++ EY ENGSLD +L
Sbjct: 57 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKNDGR--- 112
Query: 419 XXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
T Q + + + +G++Y+ + S VHRD+ NI ++S K+++F ++
Sbjct: 113 ------FTVIQLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMS 163
Query: 479 APATND----------------------VMPKF----DVFAFGVVLLELLS-GKKATRTT 511
+D KF DV+++G+V+ E++S G++
Sbjct: 164 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 223
Query: 512 ENGKTAVLWKEIXXXXXXXXXXXXXXXNWMDPNLESFY----PIDGALSLATLARACTMD 567
N +E Y P+D ++L L C
Sbjct: 224 SNQDVI-------------------------KAIEEGYRLPPPMDCPIALHQLMLDCWQK 258
Query: 568 KSLSRPNMAEVVFNLSVLTQSTETLERS 595
+ RP ++V L L ++ +L+R+
Sbjct: 259 ERSDRPKFGQIVNMLDKLIRNPNSLKRT 286
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 82/188 (43%), Gaps = 51/188 (27%)
Query: 352 GKVLAVKKIKEDVTEELR--------ILQRINHANLVKLMGVSSDSQGNRF--LVYEYAE 401
G+++AVK +KE +LR IL+ + H ++VK G D QG + LV EY
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCED-QGEKSVQLVMEYVP 95
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
GSL +L P + +Q L A + G+ Y+H AQ +HR + N
Sbjct: 96 LGSLRDYL-PRHC----------VGLAQLLLFAQQICEGMAYLH--AQ-HYIHRALAARN 141
Query: 462 IQLDSRFKAKIANFSL--AAPATNDVM--------PKF----------------DVFAFG 495
+ LD+ KI +F L A P ++ P F DV++FG
Sbjct: 142 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFG 201
Query: 496 VVLLELLS 503
V L ELL+
Sbjct: 202 VTLYELLT 209
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 107/264 (40%), Gaps = 61/264 (23%)
Query: 359 KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXX 418
K + D E I+ + +H N++ L GV + + ++ EY ENGSLD +L
Sbjct: 72 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKNDGR--- 127
Query: 419 XXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
T Q + + + +G++Y+ + S VHRD+ NI ++S K+++F ++
Sbjct: 128 ------FTVIQLVGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMS 178
Query: 479 APATND----------------------VMPKF----DVFAFGVVLLELLS-GKKATRTT 511
+D KF DV+++G+V+ E++S G++
Sbjct: 179 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
Query: 512 ENGKTAVLWKEIXXXXXXXXXXXXXXXNWMDPNLESFYPIDGALSLATLARACTMDKSLS 571
N +E + P P+D ++L L C +
Sbjct: 239 SNQDVIKAIEE----------------GYRLPP-----PMDCPIALHQLMLDCWQKERSD 277
Query: 572 RPNMAEVVFNLSVLTQSTETLERS 595
RP ++V L L ++ +L+R+
Sbjct: 278 RPKFGQIVNMLDKLIRNPNSLKRT 301
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 82/188 (43%), Gaps = 51/188 (27%)
Query: 352 GKVLAVKKIKEDVTEELR--------ILQRINHANLVKLMGVSSDSQGNRF--LVYEYAE 401
G+++AVK +KE +LR IL+ + H ++VK G D QG + LV EY
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCED-QGEKSVQLVMEYVP 96
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
GSL +L P + +Q L A + G+ Y+H AQ +HR + N
Sbjct: 97 LGSLRDYL-PRHC----------VGLAQLLLFAQQICEGMAYLH--AQ-HYIHRALAARN 142
Query: 462 IQLDSRFKAKIANFSL--AAPATNDVM--------PKF----------------DVFAFG 495
+ LD+ KI +F L A P ++ P F DV++FG
Sbjct: 143 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFG 202
Query: 496 VVLLELLS 503
V L ELL+
Sbjct: 203 VTLYELLT 210
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 84/209 (40%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ ++NH N+V+
Sbjct: 41 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 99
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 100 IGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 51/188 (27%)
Query: 352 GKVLAVKKIKEDV--------TEELRILQRINHANLVKLMGVSSDSQGNRFL--VYEYAE 401
G+++AVK +K D +E+ IL+ + H +++K G D QG + L V EY
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED-QGEKSLQLVMEYVP 101
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
GSL +L P + +Q L A + G+ Y+H AQ +HR++ N
Sbjct: 102 LGSLRDYL-PRHS----------IGLAQLLLFAQQICEGMAYLH--AQ-HYIHRNLAARN 147
Query: 462 IQLDSRFKAKIANFSL--AAPATNDVM--------PKF----------------DVFAFG 495
+ LD+ KI +F L A P ++ P F DV++FG
Sbjct: 148 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFG 207
Query: 496 VVLLELLS 503
V L ELL+
Sbjct: 208 VTLYELLT 215
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 47/213 (22%)
Query: 324 EIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIKED------VTEELRILQRI 374
E EV E T+ L E G+ V+ +G +AVK +K+ E +++++
Sbjct: 3 EWEVPRE-TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 61
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H LV+L V + Q +++ EY ENGSL +L I LT ++ L +A
Sbjct: 62 QHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSG--------IKLTINKLLDMA 111
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
+A G+ ++ E + +HR++R NI + KIA+F LA
Sbjct: 112 AQIAEGMAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 168
Query: 479 -----APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L E+++
Sbjct: 169 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 51/188 (27%)
Query: 352 GKVLAVKKIKEDV--------TEELRILQRINHANLVKLMGVSSDSQGNRFL--VYEYAE 401
G+++AVK +K D +E+ IL+ + H +++K G D QG + L V EY
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED-QGEKSLQLVMEYVP 101
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
GSL +L P + +Q L A + G+ Y+H +HR++ N
Sbjct: 102 LGSLRDYL-PRHS----------IGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARN 147
Query: 462 IQLDSRFKAKIANFSL--AAPATNDVM--------PKF----------------DVFAFG 495
+ LD+ KI +F L A P ++ P F DV++FG
Sbjct: 148 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFG 207
Query: 496 VVLLELLS 503
V L ELL+
Sbjct: 208 VTLYELLT 215
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ + NH N+V+
Sbjct: 81 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 139
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 140 IGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 195
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 196 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 252
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 42/177 (23%)
Query: 355 LAVKKIKEDVTE------ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKW 408
+AVK +KED E E +++ I H NLV+L+GV + + ++V EY G+L +
Sbjct: 60 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-LEPPFYIVTEYMPYGNLLDY 118
Query: 409 LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF 468
L ++++ A +++ ++Y+ + + +HRD+ N +
Sbjct: 119 LRECNREEVTAVVLLYM--------ATQISSAMEYLE---KKNFIHRDLAARNCLVGENH 167
Query: 469 KAKIANFSLAAPATNDVMP------------------------KFDVFAFGVVLLEL 501
K+A+F L+ T D K DV+AFGV+L E+
Sbjct: 168 VVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ + NH N+V+
Sbjct: 55 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 114 IGVSLQSL-PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ + NH N+V+
Sbjct: 58 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 116
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 117 IGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 172
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 173 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 229
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 230 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ + NH N+V+
Sbjct: 40 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 99 IGVSLQSL-PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 155 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ + NH N+V+
Sbjct: 32 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 90
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 91 IGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 146
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 147 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 203
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 204 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ + NH N+V+
Sbjct: 40 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 99 IGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 155 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ + NH N+V+
Sbjct: 57 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 115
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 116 IGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 171
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 172 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 228
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 229 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 26/146 (17%)
Query: 355 LAVKKIKE--------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+AVK +KE D+ E +L+++NH +++KL G S G L+ EYA+ GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS-QDGPLLLIVEYAKYGSLR 114
Query: 407 KWLHPXXXXXXXXXXVIF--------------LTWSQRLRVALDVANGLQYMHEHAQPSI 452
+L LT + A ++ G+QY+ A+ +
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKL 171
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA 478
VHRD+ NI + K KI++F L+
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 26/146 (17%)
Query: 355 LAVKKIKE--------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+AVK +KE D+ E +L+++NH +++KL G S G L+ EYA+ GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS-QDGPLLLIVEYAKYGSLR 114
Query: 407 KWLHPXXXXXXXXXXVIF--------------LTWSQRLRVALDVANGLQYMHEHAQPSI 452
+L LT + A ++ G+QY+ A+ +
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKL 171
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA 478
VHRD+ NI + K KI++F L+
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G + K L
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPRGEVYKELQ-KLSKFDEQ 113
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 114 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 162 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ + NH N+V+
Sbjct: 41 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 100 IGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKW 212
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 57/205 (27%)
Query: 345 VYRATIDGKVLAVK----KIKEDVTEELRI--LQRINHANLVKLMGVSSDSQG---NRFL 395
V++A + + +AVK + K+ E + L + H N+++ +G + +L
Sbjct: 40 VWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99
Query: 396 VYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHA------- 448
+ + E GSL +L ++W++ +A +A GL Y+HE
Sbjct: 100 ITAFHEKGSLSDFLKAN-----------VVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 449 QPSIVHRDIRTNNIQLDSRFKAKIANFSLA----------------------APAT---- 482
+P+I HRDI++ N+ L + A IA+F LA AP
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208
Query: 483 ----NDVMPKFDVFAFGVVLLELLS 503
D + D++A G+VL EL S
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 53 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 110
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIANF S+
Sbjct: 111 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV 158
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 159 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 43/182 (23%)
Query: 355 LAVKKIKE------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKW 408
+A+K I+E D EE ++ +++H LV+L GV + Q LV E+ E+G L +
Sbjct: 35 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVTEFMEHGCLSDY 93
Query: 409 LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF 468
L L + LDV G+ Y+ E ++HRD+ N +
Sbjct: 94 LRTQRGLFAAETL---------LGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQ 141
Query: 469 KAKIANFSLA--------APATNDVMP----------------KFDVFAFGVVLLELLSG 504
K+++F + +T P K DV++FGV++ E+ S
Sbjct: 142 VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 201
Query: 505 KK 506
K
Sbjct: 202 GK 203
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ + NH N+V+
Sbjct: 41 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 100 IGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 40/216 (18%)
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQ 390
+ + EH G V ++ + + + + E++ L+ H +++KL V S +
Sbjct: 25 GKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS-TP 83
Query: 391 GNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
+ F+V EY G L ++ +F Q++ A+D Y H H
Sbjct: 84 TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF----QQILSAVD------YCHRHM-- 131
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSL-------------------AAPATND----VMP 487
+VHRD++ N+ LD+ AKIA+F L AAP P
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 190
Query: 488 KFDVFAFGVVLLELLSGKKATRTTENGKTAVLWKEI 523
+ D+++ GV+L LL G T ++ L+K+I
Sbjct: 191 EVDIWSCGVILYALLCG---TLPFDDEHVPTLFKKI 223
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 43/195 (22%)
Query: 349 TIDGKVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEY 399
T + +AVK +KE T EL+IL I +H N+V L+G + G ++ E+
Sbjct: 54 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 113
Query: 400 AENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
+ G+L +L FLT + + VA G++++ A +
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 170
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLAAPATNDV---------MP----------------K 488
HRD+ NI L + KI +F LA D +P +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 489 FDVFAFGVVLLELLS 503
DV++FGV+L E+ S
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ + NH N+V+
Sbjct: 47 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 105
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 106 IGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 161
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 162 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 218
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 219 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 40/216 (18%)
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQ 390
+ + EH G V ++ + + + + E++ L+ H +++KL V S +
Sbjct: 25 GKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS-TP 83
Query: 391 GNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
+ F+V EY G L ++ +F Q++ A+D Y H H
Sbjct: 84 TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF----QQILSAVD------YCHRHM-- 131
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSL-------------------AAPATND----VMP 487
+VHRD++ N+ LD+ AKIA+F L AAP P
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGP 190
Query: 488 KFDVFAFGVVLLELLSGKKATRTTENGKTAVLWKEI 523
+ D+++ GV+L LL G T ++ L+K+I
Sbjct: 191 EVDIWSCGVILYALLCG---TLPFDDEHVPTLFKKI 223
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E +++++I H LV+L V S+ ++V
Sbjct: 33 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE--PIYIV 90
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD
Sbjct: 91 TEYMSKGSLLDFLKGEMGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 200 SFGILLTEL 208
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 43/195 (22%)
Query: 349 TIDGKVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEY 399
T + +AVK +KE T EL+IL I +H N+V L+G + G ++ E+
Sbjct: 45 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 104
Query: 400 AENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
+ G+L +L FLT + + VA G++++ A +
Sbjct: 105 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 161
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLAAPATNDV---------MP----------------K 488
HRD+ NI L + KI +F LA D +P +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 489 FDVFAFGVVLLELLS 503
DV++FGV+L E+ S
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G + K L
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPRGEVYKELQ-KLSKFDEQ 113
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 114 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 162 HAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 47/197 (23%)
Query: 349 TIDGKVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEY 399
T + +AVK +KE T EL+IL I +H N+V L+G + G ++ E+
Sbjct: 54 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 113
Query: 400 AENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
+ G+L +L FLT + + VA G++++ A +
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 170
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKF------------------------ 489
HRD+ NI L + KI +F LA D P +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDARLPLKWMAPETIFDRVYT 228
Query: 490 ---DVFAFGVVLLELLS 503
DV++FGV+L E+ S
Sbjct: 229 IQSDVWSFGVLLWEIFS 245
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 41/193 (21%)
Query: 349 TIDGKVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEY 399
T + +AVK +KE T EL+IL I +H N+V L+G + G ++ E+
Sbjct: 56 TATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 115
Query: 400 AENGSLDKWLHPXXXX----XXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHR 455
+ G+L +L FLT + + VA G++++ A +HR
Sbjct: 116 CKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHR 172
Query: 456 DIRTNNIQLDSRFKAKIANFSLAAPATNDV---------MP----------------KFD 490
D+ NI L + KI +F LA D +P + D
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 491 VFAFGVVLLELLS 503
V++FGV+L E+ S
Sbjct: 233 VWSFGVLLWEIFS 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 47/197 (23%)
Query: 349 TIDGKVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEY 399
T + +AVK +KE T EL+IL I +H N+V L+G + G ++ E+
Sbjct: 45 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEF 104
Query: 400 AENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
+ G+L +L FLT + + VA G++++ A +
Sbjct: 105 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 161
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKF------------------------ 489
HRD+ NI L + KI +F LA D P +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDARLPLKWMAPETIFDRVYT 219
Query: 490 ---DVFAFGVVLLELLS 503
DV++FGV+L E+ S
Sbjct: 220 IQSDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 47/197 (23%)
Query: 349 TIDGKVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEY 399
T + +AVK +KE T EL+IL I +H N+V L+G + G ++ E+
Sbjct: 56 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 115
Query: 400 AENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
+ G+L +L FLT + + VA G++++ A +
Sbjct: 116 CKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 172
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKF------------------------ 489
HRD+ NI L + KI +F LA D P +
Sbjct: 173 HRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDARLPLKWMAPETIFDRVYT 230
Query: 490 ---DVFAFGVVLLELLS 503
DV++FGV+L E+ S
Sbjct: 231 IQSDVWSFGVLLWEIFS 247
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 111
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIANF S+
Sbjct: 112 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV 159
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 160 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKEDVTE--------ELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E +E E I+ + NH N+V+
Sbjct: 67 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 125
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 126 IGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 181
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 182 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 238
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 239 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 47/193 (24%)
Query: 353 KVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENG 403
+ +AVK +KE T EL+IL I +H N+V L+G + G ++ E+ + G
Sbjct: 95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 404 SLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDI 457
+L +L FLT + + VA G++++ A +HRD+
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 211
Query: 458 RTNNIQLDSRFKAKIANFSLAAPATNDVMPKF---------------------------D 490
NI L + KI +F LA D P + D
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDARLPLKWMAPETIFDRVYTIQSD 269
Query: 491 VFAFGVVLLELLS 503
V++FGV+L E+ S
Sbjct: 270 VWSFGVLLWEIFS 282
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 8 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 67 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM--------ATQ 117
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMP--------- 487
+++ ++Y+ + + +HRD+ N + K+A+F L+ T D
Sbjct: 118 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI 174
Query: 488 ---------------KFDVFAFGVVLLEL 501
K DV+AFGV+L E+
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 42/194 (21%)
Query: 349 TIDGKVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEY 399
T + +AVK +KE T EL+IL I +H N+V L+G + G ++ E+
Sbjct: 55 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 114
Query: 400 AENGSLDKWLHPXX-----XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+ G+L +L FLT + + VA G++++ A +H
Sbjct: 115 CKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIH 171
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDV---------MP----------------KF 489
RD+ NI L + KI +F LA D +P +
Sbjct: 172 RDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 231
Query: 490 DVFAFGVVLLELLS 503
DV++FGV+L E+ S
Sbjct: 232 DVWSFGVLLWEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 43/195 (22%)
Query: 349 TIDGKVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEY 399
T + +AVK +KE T EL+IL I +H N+V L+G + G ++ E+
Sbjct: 45 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEF 104
Query: 400 AENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
+ G+L +L FLT + + VA G++++ A +
Sbjct: 105 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 161
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLAAPATND---------VMP----------------K 488
HRD+ NI L + KI +F LA D +P +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 489 FDVFAFGVVLLELLS 503
DV++FGV+L E+ S
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 8 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 67 PNLVQLLGVCT-REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM--------ATQ 117
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMP--------- 487
+++ ++Y+ + + +HRD+ N + K+A+F L+ T D
Sbjct: 118 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 488 ---------------KFDVFAFGVVLLEL 501
K DV+AFGV+L E+
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 82/209 (39%), Gaps = 51/209 (24%)
Query: 338 HYSIGKSVYRATIDGKV-------LAVKKIKE--------DVTEELRILQRINHANLVKL 382
H + G+ VY + G +AVK + E D E I+ + NH N+V+
Sbjct: 55 HGAFGE-VYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 383 MGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
+GVS S RF++ E G L +L + L L VA D+A G Q
Sbjct: 114 IGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 443 YMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLA--------------APATNDV 485
Y+ E+ +HRDI N L AKI +F +A A
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 486 MP-----------KFDVFAFGVVLLELLS 503
MP K D ++FGV+L E+ S
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 43/195 (22%)
Query: 349 TIDGKVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEY 399
T + +AVK +KE T EL+IL I +H N+V L+G + G ++ E+
Sbjct: 54 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 113
Query: 400 AENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
+ G+L +L FLT + + VA G++++ A +
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 170
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLAAPATNDV---------MP----------------K 488
HRD+ NI L + KI +F LA D +P +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 489 FDVFAFGVVLLELLS 503
DV++FGV+L E+ S
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 10 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 69 PNLVQLLGVCT-REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM--------ATQ 119
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 47/197 (23%)
Query: 349 TIDGKVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEY 399
T + +AVK +KE T EL+IL I +H N+V L+G + G ++ E+
Sbjct: 45 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEF 104
Query: 400 AENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
+ G+L +L FLT + + VA G++++ A +
Sbjct: 105 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 161
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKF------------------------ 489
HRD+ NI L + KI +F LA D P +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDARLPLKWMAPETIFDRVYT 219
Query: 490 ---DVFAFGVVLLELLS 503
DV++FGV+L E+ S
Sbjct: 220 IQSDVWSFGVLLWEIFS 236
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 59/205 (28%)
Query: 343 KSVYRATIDGKVLAVKKI-------KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFL 395
K +R T G+V+ +K++ + +E+++++ + H N++K +GV + F+
Sbjct: 28 KVTHRET--GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85
Query: 396 VYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHR 455
EY + G+L + WSQR+ A D+A+G+ Y+H +I+HR
Sbjct: 86 T-EYIKGGTLRGIIKSMDSQ---------YPWSQRVSFAKDIASGMAYLHSM---NIIHR 132
Query: 456 DIRTNNIQLDSRFKAKIANFSLAAPATND---------------------------VMP- 487
D+ ++N + +A+F LA ++ + P
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 488 ---------KFDVFAFGVVLLELLS 503
K DVF+FG+VL E++
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 15 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 74 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM--------ATQ 124
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 10 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 69 PNLVQLLGVCT-REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM--------ATQ 119
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 10 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 69 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM--------ATQ 119
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 10 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 69 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM--------ATQ 119
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 11 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 70 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 120
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------APAT----- 482
+++ ++Y+ + + +HRD+ N + K+A+F L+ APA
Sbjct: 121 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI 177
Query: 483 ----------NDVMPKFDVFAFGVVLLEL 501
N K DV+AFGV+L E+
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 44/190 (23%)
Query: 345 VYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVY 397
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IYIVT 340
Query: 398 EYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDI 457
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD+
Sbjct: 341 EYMSKGSLLDFLKGETGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 389
Query: 458 RTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVFA 493
R NI + K+A+F LA AP K DV++
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 494 FGVVLLELLS 503
FG++L EL +
Sbjct: 450 FGILLTELTT 459
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 51/197 (25%)
Query: 354 VLAVKKIKE--------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
++AVK +KE D E ++ ++ N+VKL+GV + + L++EY G L
Sbjct: 79 MVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK-PMCLLFEYMAYGDL 137
Query: 406 DKWLH---PXXXXXXXXXXVIF-----------LTWSQRLRVALDVANGLQYMHEHAQPS 451
+++L P + L+ +++L +A VA G+ Y+ E
Sbjct: 138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---K 194
Query: 452 IVHRDIRTNNIQLDSRFKAKIANFSLA---------APATNDVMP--------------- 487
VHRD+ T N + KIA+F L+ ND +P
Sbjct: 195 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYT 254
Query: 488 -KFDVFAFGVVLLELLS 503
+ DV+A+GVVL E+ S
Sbjct: 255 TESDVWAYGVVLWEIFS 271
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 15 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 74 PNLVQLLGVCT-REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 124
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 11 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 70 PNLVQLLGVCT-REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 120
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 121 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 177
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 15 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 74 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 124
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 181
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 15 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 74 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 124
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 12 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 71 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 121
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------APAT----- 482
+++ ++Y+ + + +HRD+ N + K+A+F L+ APA
Sbjct: 122 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI 178
Query: 483 ----------NDVMPKFDVFAFGVVLLEL 501
N K DV+AFGV+L E+
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G DS +L+ EYA G++ + L
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDST-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 108
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 109 RTATYIT---------ELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSV 156
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 157 HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 14 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 72
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 73 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 123
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 124 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 180
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 15 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 74 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 124
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 44/188 (23%)
Query: 345 VYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVY 397
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IYIVT 257
Query: 398 EYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDI 457
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD+
Sbjct: 258 EYMSKGSLLDFLKGETGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 306
Query: 458 RTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVFA 493
R NI + K+A+F LA AP K DV++
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 494 FGVVLLEL 501
FG++L EL
Sbjct: 367 FGILLTEL 374
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 44/188 (23%)
Query: 345 VYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVY 397
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IYIVT 257
Query: 398 EYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDI 457
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD+
Sbjct: 258 EYMSKGSLLDFLKGETGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 306
Query: 458 RTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVFA 493
R NI + K+A+F LA AP K DV++
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 494 FGVVLLEL 501
FG++L EL
Sbjct: 367 FGILLTEL 374
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 33 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIV 90
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD
Sbjct: 91 IEYMSKGSLLDFLKGEMGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 200 SFGILLTEL 208
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 33 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIV 90
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD
Sbjct: 91 IEYMSKGSLLDFLKGEMGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 200 SFGILLTEL 208
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 12 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 71 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 121
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 122 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 178
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 10 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 69 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 119
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 12 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 71 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 121
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 122 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 178
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 10 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 69 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 119
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 120 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 33 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIV 90
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD
Sbjct: 91 CEYMSKGSLLDFLKGEMGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 200 SFGILLTEL 208
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 22 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIV 79
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD
Sbjct: 80 TEYMSKGSLLDFLKGEMGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRD 128
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 189 SFGILLTEL 197
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 49/209 (23%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE------ELRILQRINH 376
ME T +++ + +G Y +G +AVK +KED E E +++ I H
Sbjct: 23 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 81
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
NLV+L+GV + + +++ E+ G+L +L ++++ A
Sbjct: 82 PNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM--------ATQ 132
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------------------ 478
+++ ++Y+ + + +HRD+ N + K+A+F L+
Sbjct: 133 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 189
Query: 479 ---AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 190 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 40/178 (22%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
++ +++++ + E L +++ +NH N++ L+G+ +G ++ Y +G L +++
Sbjct: 59 RITEMQQVEAFLREGL-LMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP 117
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
+ F L VA G++Y+ A+ VHRD+ N LD F K+
Sbjct: 118 QRNPTVKDLISF---------GLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKV 165
Query: 473 ANFSLA---------------------------APATNDVMPKFDVFAFGVVLLELLS 503
A+F LA + T K DV++FGV+L ELL+
Sbjct: 166 ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 21/132 (15%)
Query: 355 LAVKKIKEDVTEELR--------ILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+A+K +K TE R I+ + H N+++L GV ++S L E+ ENG+LD
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILT-EFMENGALD 103
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L V L +A+G++Y+ A+ S VHRD+ NI ++S
Sbjct: 104 SFLRLNDGQFTVIQLVGMLR---------GIASGMRYL---AEMSYVHRDLAARNILVNS 151
Query: 467 RFKAKIANFSLA 478
K+++F L+
Sbjct: 152 NLVCKVSDFGLS 163
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 42/177 (23%)
Query: 355 LAVKKIKEDVTE------ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKW 408
+AVK +KED E E +++ I H NLV+L+GV + + +++ E+ G+L +
Sbjct: 39 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDY 97
Query: 409 LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF 468
L ++++ A +++ ++Y+ + + +HRD+ N +
Sbjct: 98 LRECNRQEVSAVVLLYM--------ATQISSAMEYLE---KKNFIHRDLAARNCLVGENH 146
Query: 469 KAKIANFSLAAPATNDVMP------------------------KFDVFAFGVVLLEL 501
K+A+F L+ T D K DV+AFGV+L E+
Sbjct: 147 LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 33 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIV 90
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD
Sbjct: 91 TEYMSKGSLLDFLKGEMGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 200 SFGILLTEL 208
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 26 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIV 83
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD
Sbjct: 84 TEYMSKGSLLDFLKGETGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRD 132
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 193 SFGILLTEL 201
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 24 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIV 81
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD
Sbjct: 82 TEYMSKGSLLDFLKGEMGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRD 130
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 191 SFGILLTEL 199
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 355 LAVKKIKEDVTEELR--------ILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+A+K +K TE R I+ + H N+++L GV ++S L E+ ENG+LD
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILT-EFMENGALD 105
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L VI L R +A+G++Y+ A+ S VHRD+ NI ++S
Sbjct: 106 SFLR----LNDGQFTVIQLVGMLR-----GIASGMRYL---AEMSYVHRDLAARNILVNS 153
Query: 467 RFKAKIANFSLA 478
K+++F L+
Sbjct: 154 NLVCKVSDFGLS 165
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 33/168 (19%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV +K + D E I+ + +H N+V L GV + + +V E+ ENG+LD +L
Sbjct: 80 KVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGK-PVMIVIEFMENGALDAFLRKH 138
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
T Q + + +A G++Y+ A VHRD+ NI ++S K+
Sbjct: 139 DGQ---------FTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKV 186
Query: 473 ANFSLAAPATNDVMPKFDVFAFGVVLLELLSGKKATRTTENGKTAVLW 520
++F L+ +D +A TT GK V W
Sbjct: 187 SDFGLSRVIEDD--------------------PEAVYTTTGGKIPVRW 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 77 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 134
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 135 RTATYIT---------ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV 182
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 183 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 44/188 (23%)
Query: 345 VYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVY 397
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IYIVG 257
Query: 398 EYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDI 457
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD+
Sbjct: 258 EYMSKGSLLDFLKGETGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 306
Query: 458 RTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVFA 493
R NI + K+A+F LA AP K DV++
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 494 FGVVLLEL 501
FG++L EL
Sbjct: 367 FGILLTEL 374
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 108
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 109 RTATYIT---------ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV 156
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 157 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 77 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 134
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 135 RTATYIT---------ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV 182
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 183 HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 29/144 (20%)
Query: 352 GKVLAVKK---------IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAEN 402
G+++A+KK +K+ E+++L+++ H NLV L+ V + +LV+E+ ++
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK-RWYLVFEFVDH 108
Query: 403 GSLDKW-LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
LD L P +F + NG+ + H H +I+HRDI+ N
Sbjct: 109 TILDDLELFPNGLDYQVVQKYLF-----------QIINGIGFCHSH---NIIHRDIKPEN 154
Query: 462 IQLDSRFKAKIANF----SLAAPA 481
I + K+ +F +LAAP
Sbjct: 155 ILVSQSGVVKLCDFGFARTLAAPG 178
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 108
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 109 RTATYIT---------ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV 156
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 157 HAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 113
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 114 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 162 HAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 113
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 114 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 162 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 111
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 112 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 160 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 68 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 125
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 126 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 173
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 174 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 111
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 112 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 160 HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 71/256 (27%)
Query: 306 QNKLLPGVSGY----------------LGKPIVYEI--EVIMESTMNLSEHYSIGKSVYR 347
Q+ +L GVS Y LGKP+ +V+M +E I K +
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVM------AEAVGIDKDKPK 65
Query: 348 ATIDGKVLAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYE 398
+ +AVK +K+D TE E+ +++ I H N++ L+G + G +++ E
Sbjct: 66 EAV---TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVE 121
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSI 452
YA G+L ++L I +T+ + +A G++Y+ A
Sbjct: 122 YASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA---------APATNDVMP---------------- 487
+HRD+ N+ + KIA+F LA TN +P
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 488 KFDVFAFGVVLLELLS 503
+ DV++FGV++ E+ +
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 55 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 112
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 113 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 160
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 161 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 113
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 114 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 162 HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 50 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 107
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 108 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 155
Query: 478 AAPA--------TNDVMP-----------KFDVFAFGVVLLELLSGK 505
AP+ T D +P K D+++ GV+ E L GK
Sbjct: 156 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 28/165 (16%)
Query: 329 MESTMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQR 373
+ S N + IG+ Y R + G+V+A+KKI+ D E+ +L+
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 374 INHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRV 433
+NH N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 63 LNHPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 112
Query: 434 ALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 113 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 108
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 109 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 157 HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 53 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 110
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 111 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 158
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 159 HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 45/201 (22%)
Query: 340 SIGKSVY-RATIDGKVLAVKKI---------KEDVTEELRILQRINHANLVKLMGVSSDS 389
S GK++ ++T DG+ +K+I +E+ E+ +L + H N+V+ S +
Sbjct: 36 SFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE-SFEE 94
Query: 390 QGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQ 449
G+ ++V +Y E G L K ++ + Q L + + L+++H+
Sbjct: 95 NGSLYIVMDYCEGGDLFKRINAQKG--------VLFQEDQILDWFVQICLALKHVHDR-- 144
Query: 450 PSIVHRDIRTNNIQLDSRFKAKIANFSLA--------------------APATNDVMP-- 487
I+HRDI++ NI L ++ +F +A +P + P
Sbjct: 145 -KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYN 203
Query: 488 -KFDVFAFGVVLLELLSGKKA 507
K D++A G VL EL + K A
Sbjct: 204 NKSDIWALGCVLYELCTLKHA 224
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 37/179 (20%)
Query: 315 GYLGKPIVYE----IEVIMESTMNLSEHYSIGKSVYRA--TIDGKVLAVKKIKEDV---- 364
G LG P E +E I E T + VY+A + G+V+A+KKI+ D
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGV---------VYKARNKLTGEVVALKKIRLDTETEG 51
Query: 365 -----TEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
E+ +L+ +NH N+VKL+ V ++ +LV+E+ LH
Sbjct: 52 VPSTAIREISLLKELNHPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDA 101
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ + + GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 102 SALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 64 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKTFMDASALTGIPLPLIKSYLF 113
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 108
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 109 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 157 HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 28/165 (16%)
Query: 329 MESTMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQR 373
+ S N + IG+ Y R + G+V+A+KKI+ D E+ +L+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 374 INHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRV 433
+NH N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 62 LNHPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSY 111
Query: 434 ALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 355 LAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +K+D TE E+ +++ I H N++ L+G + G +++ EYA G+L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNL 120
Query: 406 DKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
++L I +T+ + +A G++Y+ A +HRD+
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 177
Query: 460 NNIQLDSRFKAKIANFSLA---------APATNDVMP----------------KFDVFAF 494
N+ + KIA+F LA TN +P + DV++F
Sbjct: 178 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 237
Query: 495 GVVLLELLS 503
GV++ E+ +
Sbjct: 238 GVLMWEIFT 246
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 108
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 109 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 157 HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 52 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 109
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 110 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 157
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 158 HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 52 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 109
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 110 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 157
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 158 HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 38/196 (19%)
Query: 333 MNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGN 392
+ L+ HY + V I ++L + V E+ L+ + H +++KL V + + +
Sbjct: 25 VKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT-TPTD 83
Query: 393 RFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSI 452
+V EYA D + +T + R + ++Y H H I
Sbjct: 84 IVMVIEYAGGELFDYIVEKKR-----------MTEDEGRRFFQQIICAIEYCHRH---KI 129
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSL-------------------AAPATND----VMPKF 489
VHRD++ N+ LD KIA+F L AAP + P+
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEV 189
Query: 490 DVFAFGVVLLELLSGK 505
DV++ G+VL +L G+
Sbjct: 190 DVWSCGIVLYVMLVGR 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 71/256 (27%)
Query: 306 QNKLLPGVSGY----------------LGKPIVYEI--EVIMESTMNLSEHYSIGKSVYR 347
Q+ +L GVS Y LGKP+ +V+M +E I K +
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVM------AEAVGIDKDKPK 65
Query: 348 ATIDGKVLAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYE 398
+ +AVK +K+D TE E+ +++ I H N++ L+G + G +++ E
Sbjct: 66 EAV---TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVE 121
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSI 452
YA G+L ++L I +T+ + +A G++Y+ A
Sbjct: 122 YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA---------APATNDVMP---------------- 487
+HRD+ N+ + KIA+F LA TN +P
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 488 KFDVFAFGVVLLELLS 503
+ DV++FGV++ E+ +
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 355 LAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +K+D TE E+ +++ I H N++ L+G + G +++ EYA G+L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNL 117
Query: 406 DKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
++L I +T+ + +A G++Y+ A +HRD+
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 174
Query: 460 NNIQLDSRFKAKIANFSLA---------APATNDVMP----------------KFDVFAF 494
N+ + KIA+F LA TN +P + DV++F
Sbjct: 175 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 234
Query: 495 GVVLLELLS 503
GV++ E+ +
Sbjct: 235 GVLMWEIFT 243
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 111
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 112 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 160 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 63 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 355 LAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +K+D TE E+ +++ I H N++ L+G + G +++ EYA G+L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNL 115
Query: 406 DKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
++L I +T+ + +A G++Y+ A +HRD+
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTA 172
Query: 460 NNIQLDSRFKAKIANFSLA---------APATNDVMP----------------KFDVFAF 494
N+ + KIA+F LA TN +P + DV++F
Sbjct: 173 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 232
Query: 495 GVVLLELLS 503
GV++ E+ +
Sbjct: 233 GVLMWEIFT 241
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 64 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 61 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 63 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 63 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA 152
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 37/179 (20%)
Query: 315 GYLGKPIVYE----IEVIMESTMNLSEHYSIGKSVYRA--TIDGKVLAVKKIKEDV---- 364
G LG P E +E I E T + VY+A + G+V+A+KKI+ D
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGV---------VYKARNKLTGEVVALKKIRLDTETEG 51
Query: 365 -----TEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
E+ +L+ +NH N+VKL+ V ++ +LV+E+ LH
Sbjct: 52 VPSTAIREISLLKELNHPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDA 101
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ + + GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 102 SALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 108
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 109 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Query: 478 AAPA--------TNDVMP-----------KFDVFAFGVVLLELLSGK 505
AP+ T D +P K D+++ GV+ E L GK
Sbjct: 157 HAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 61 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 49/185 (26%)
Query: 355 LAVKKIKEDVTEELR--------ILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+A+K +K TE+ R I+ + +H N++ L GV + S ++ E+ ENGSLD
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKST-PVMIITEFMENGSLD 122
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L T Q + + +A G++Y+ A + VHRD+ NI ++S
Sbjct: 123 SFLRQNDGQ---------FTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNS 170
Query: 467 RFKAKIANFSLAAPATNDV------------MP------------KF----DVFAFGVVL 498
K+++F L+ +D +P KF DV+++G+V+
Sbjct: 171 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 230
Query: 499 LELLS 503
E++S
Sbjct: 231 WEVMS 235
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 61 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 48 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 105
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 106 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 153
Query: 478 AAPA--------TNDVMP-----------KFDVFAFGVVLLELLSGK 505
AP+ T D +P K D+++ GV+ E L GK
Sbjct: 154 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 61/273 (22%)
Query: 273 VRILNRNGSSLESADLIPMKENSKSDRFEPKLAQNKLLPGVSGYLGKPIVYEI--EVIME 330
VRI R S+ ++ L + E + + + ++KL LGKP+ +V+M
Sbjct: 47 VRITTRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLT------LGKPLGEGCFGQVVM- 99
Query: 331 STMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTE--------ELRILQRIN-HANLVK 381
+E I K + + +AVK +K+D TE E+ +++ I H N++
Sbjct: 100 -----AEAVGIDKDKPKEAV---TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 151
Query: 382 LMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVAL 435
L+G + G +++ EYA G+L ++L I +T+ +
Sbjct: 152 LLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY 210
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------APATNDVM 486
+A G++Y+ A +HRD+ N+ + KIA+F LA TN +
Sbjct: 211 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 267
Query: 487 P----------------KFDVFAFGVVLLELLS 503
P + DV++FGV++ E+ +
Sbjct: 268 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 111
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 112 RTATYIT---------ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV 159
Query: 478 AAPA--------TNDVMP-----------KFDVFAFGVVLLELLSGK 505
AP+ T D +P K D+++ GV+ E L GK
Sbjct: 160 HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 62 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 54/224 (24%)
Query: 319 KPIVYEI-----EVIMESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE- 366
KP +Y + + ME T +++ + +G Y +G +AVK +KED E
Sbjct: 202 KPTIYGVSPNYDKWEMERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 260
Query: 367 -----ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXX 421
E +++ I H NLV+L+GV + + +++ E+ G+L +L
Sbjct: 261 EEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 319
Query: 422 VIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA--- 478
++++ A +++ ++Y+ + + +HR++ N + K+A+F L+
Sbjct: 320 LLYM--------ATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 368
Query: 479 ------------------AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 369 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 62 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ + L K++ +
Sbjct: 64 HPNIVKLLDVIH-TENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLI--------KSYLF 113
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 111
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 112 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 160 HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 61 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 54/224 (24%)
Query: 319 KPIVYEI-----EVIMESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE- 366
KP VY + + ME T +++ + +G Y +G +AVK +KED E
Sbjct: 241 KPTVYGVSPNYDKWEMERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 299
Query: 367 -----ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXX 421
E +++ I H NLV+L+GV + + +++ E+ G+L +L
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 358
Query: 422 VIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA--- 478
++++ A +++ ++Y+ + + +HR++ N + K+A+F L+
Sbjct: 359 LLYM--------ATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 407
Query: 479 ------------------AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 408 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 71/256 (27%)
Query: 306 QNKLLPGVSGY----------------LGKPIVYEI--EVIMESTMNLSEHYSIGKSVYR 347
Q+ +L GVS Y LGKP+ +V+M +E I K +
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVM------AEAVGIDKDKPK 65
Query: 348 ATIDGKVLAVKKIKEDVTEE--------LRILQRIN-HANLVKLMGVSSDSQGNRFLVYE 398
+ +AVK +K+D TEE + +++ I H N++ L+G + G +++ E
Sbjct: 66 EAV---TVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVE 121
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSI 452
YA G+L ++L I +T+ + +A G++Y+ A
Sbjct: 122 YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA---------APATNDVMP---------------- 487
+HRD+ N+ + KIA+F LA TN +P
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 488 KFDVFAFGVVLLELLS 503
+ DV++FGV++ E+ +
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 62 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 108
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 109 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 157 HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 71/256 (27%)
Query: 306 QNKLLPGVSGY----------------LGKPIVYEI--EVIMESTMNLSEHYSIGKSVYR 347
Q+ +L GVS Y LGKP+ +V+M +E I K +
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVM------AEAVGIDKDKPK 65
Query: 348 ATIDGKVLAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYE 398
+ +AVK +K+D TE E+ +++ I H N++ L+G + G +++ E
Sbjct: 66 EAV---TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACT-QDGPLYVIVE 121
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSI 452
YA G+L ++L I +T+ + +A G++Y+ A
Sbjct: 122 YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA---------APATNDVMP---------------- 487
+HRD+ N+ + KIA+F LA TN +P
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 488 KFDVFAFGVVLLELLS 503
+ DV++FGV++ E+ +
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 38/172 (22%)
Query: 357 VKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXX 416
++K E++ E+ +L+ ++H N++KL V D + +LV E+ E G L + +
Sbjct: 86 IEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK-YFYLVTEFYEGGELFEQIINRHK-- 142
Query: 417 XXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR---FKAKIA 473
+ + +G+ Y+H+H +IVHRDI+ NI L+++ KI
Sbjct: 143 --------FDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIV 191
Query: 474 NFSLAAPATND------------VMP---------KFDVFAFGVVLLELLSG 504
+F L++ + D + P K DV++ GV++ LL G
Sbjct: 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 71/256 (27%)
Query: 306 QNKLLPGVSGY----------------LGKPIVYEI--EVIMESTMNLSEHYSIGKSVYR 347
Q+ +L GVS Y LGKP+ +V+M +E I K +
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVM------AEAVGIDKDKPK 65
Query: 348 ATIDGKVLAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYE 398
+ +AVK +K+D TE E+ +++ I H N++ L+G + G +++ E
Sbjct: 66 EAV---TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACT-QDGPLYVIVE 121
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSI 452
YA G+L ++L I +T+ + +A G++Y+ A
Sbjct: 122 YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA---------APATNDVMP---------------- 487
+HRD+ N+ + KIA+F LA TN +P
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 488 KFDVFAFGVVLLELLS 503
+ DV++FGV++ E+ +
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 54/224 (24%)
Query: 319 KPIVYEI-----EVIMESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE- 366
KP VY + + ME T +++ + +G Y +G +AVK +KED E
Sbjct: 199 KPTVYGVSPNYDKWEMERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 257
Query: 367 -----ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXX 421
E +++ I H NLV+L+GV + + +++ E+ G+L +L
Sbjct: 258 EEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 316
Query: 422 VIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA--- 478
++++ A +++ ++Y+ + + +HR++ N + K+A+F L+
Sbjct: 317 LLYM--------ATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 365
Query: 479 ------------------AP---ATNDVMPKFDVFAFGVVLLEL 501
AP A N K DV+AFGV+L E+
Sbjct: 366 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ LH + +
Sbjct: 61 HPNIVKLLDVIH-TENKLYLVFEF---------LHQDLKDFMDASALTGIPLPLIKSYLF 110
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA 150
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 33 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIV 90
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY G L +L +L Q + +A +A+G+ Y+ + VHRD
Sbjct: 91 MEYMSKGCLLDFLKGEMGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 200 SFGILLTEL 208
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +NH N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ LH + + +
Sbjct: 64 IVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 114 QGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 30 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIV 87
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L +L Q + ++ +A+G+ Y+ + VHRD
Sbjct: 88 TEYMNKGSLLDFLKGETGK--------YLRLPQLVDMSAQIASGMAYVERM---NYVHRD 136
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 197 SFGILLTEL 205
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 45/195 (23%)
Query: 340 SIGKSVYRATIDGKVLAVKKIK-----EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
S+ K++++ T G+++A+K++ +++ +E+ I+Q+ + ++VK G S + +
Sbjct: 44 SVYKAIHKET--GQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYG-SYFKNTDLW 100
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V EY GS+ + LT + + GL+Y+H + +H
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKT---------LTEDEIATILQSTLKGLEYLHFMRK---IH 148
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPK------------------------FD 490
RDI+ NI L++ AK+A+F +A T D M K D
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAPEVIQEIGYNCVAD 207
Query: 491 VFAFGVVLLELLSGK 505
+++ G+ +E+ GK
Sbjct: 208 IWSLGITAIEMAEGK 222
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 30 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIV 87
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L +L Q + ++ +A+G+ Y+ + VHRD
Sbjct: 88 TEYMNKGSLLDFLKGETGK--------YLRLPQLVDMSAQIASGMAYVERM---NYVHRD 136
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 197 SFGILLTEL 205
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +NH N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ LH + + +
Sbjct: 63 IVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 71/256 (27%)
Query: 306 QNKLLPGVSGY----------------LGKPIVYEI--EVIMESTMNLSEHYSIGKSVYR 347
Q+ +L GVS Y LGKP+ +V+M +E I K +
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVM------AEAVGIDKDKPK 65
Query: 348 ATIDGKVLAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYE 398
+ +AVK +K+D TE E+ +++ I H N++ L+G + G +++ E
Sbjct: 66 EAV---TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVE 121
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSI 452
YA G+L ++L I +T+ + +A G++Y+ A
Sbjct: 122 YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLAAP---------ATNDVMP---------------- 487
+HRD+ N+ + KIA+F LA TN +P
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTH 238
Query: 488 KFDVFAFGVVLLELLS 503
+ DV++FGV++ E+ +
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +NH N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ LH + + +
Sbjct: 64 IVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 35/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 52 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSKFDEQ 109
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S
Sbjct: 110 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSC 157
Query: 478 AAPATN--------DVMP-----------KFDVFAFGVVLLELLSGK 505
AP++ D +P K D+++ GV+ E L GK
Sbjct: 158 HAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 44/188 (23%)
Query: 345 VYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVY 397
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 201 VWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--IYIVT 258
Query: 398 EYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDI 457
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD+
Sbjct: 259 EYMSKGSLLDFLKGEMGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 307
Query: 458 RTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVFA 493
R NI + K+A+F L AP K DV++
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 367
Query: 494 FGVVLLEL 501
FG++L EL
Sbjct: 368 FGILLTEL 375
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +NH N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ LH + + +
Sbjct: 64 IVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 44/191 (23%)
Query: 341 IGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYA 400
I + Y + K A K + E+ +L++++H N++KL + DS + ++V E
Sbjct: 45 ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-SSFYIVGELY 103
Query: 401 ENGSL-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
G L D+ + + R+ V +G+ YMH+H +IVHRD++
Sbjct: 104 TGGELFDEIIKRKR-----------FSEHDAARIIKQVFSGITYMHKH---NIVHRDLKP 149
Query: 460 NNIQLDSRFK---AKIANFSLA-------------------AP----ATNDVMPKFDVFA 493
NI L+S+ K KI +F L+ AP T D K DV++
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYD--EKCDVWS 207
Query: 494 FGVVLLELLSG 504
GV+L LLSG
Sbjct: 208 AGVILYILLSG 218
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +NH N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ LH + + +
Sbjct: 63 IVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +NH N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ LH + + +
Sbjct: 63 IVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +NH N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ LH + + +
Sbjct: 63 IVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +NH N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ LH + + +
Sbjct: 65 IVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E EE +I++++ H LV+L V S+ ++V
Sbjct: 24 EVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEP--IYIV 81
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L ++ +A VA G+ Y+ + +HRD
Sbjct: 82 TEYMNKGSLLDFLKDGEGRALKLPNLV--------DMAAQVAAGMAYIERM---NYIHRD 130
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R+ NI + + KIA+F LA AP K DV+
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 493 AFGVVLLELLS 503
+FG++L EL++
Sbjct: 191 SFGILLTELVT 201
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 53/200 (26%)
Query: 345 VYRAT--IDGKVLAVKKIK---EDVTEELRILQRINHANLVKLMGV---------SSDSQ 390
V++A IDGK +K++K E E++ L +++H N+V G +S
Sbjct: 27 VFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86
Query: 391 GNR------FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYM 444
+R F+ E+ + G+L++W+ L + + G+ Y+
Sbjct: 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA--------LELFEQITKGVDYI 138
Query: 445 HEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATN--------------------- 483
H +++RD++ +NI L + KI +F L N
Sbjct: 139 H---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISS 195
Query: 484 -DVMPKFDVFAFGVVLLELL 502
D + D++A G++L ELL
Sbjct: 196 QDYGKEVDLYALGLILAELL 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 33 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIV 90
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY G L +L +L Q + +A +A+G+ Y+ + VHRD
Sbjct: 91 TEYMSKGCLLDFLKGEMGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 200 SFGILLTEL 208
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 44/191 (23%)
Query: 341 IGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYA 400
I + Y + K A K + E+ +L++++H N++KL + DS + ++V E
Sbjct: 45 ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-SSFYIVGELY 103
Query: 401 ENGSL-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
G L D+ + + R+ V +G+ YMH+H +IVHRD++
Sbjct: 104 TGGELFDEIIKRKR-----------FSEHDAARIIKQVFSGITYMHKH---NIVHRDLKP 149
Query: 460 NNIQLDSRFK---AKIANFSLA-------------------AP----ATNDVMPKFDVFA 493
NI L+S+ K KI +F L+ AP T D K DV++
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYD--EKCDVWS 207
Query: 494 FGVVLLELLSG 504
GV+L LLSG
Sbjct: 208 AGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 44/191 (23%)
Query: 341 IGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYA 400
I + Y + K A K + E+ +L++++H N++KL + DS + ++V E
Sbjct: 45 ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-SSFYIVGELY 103
Query: 401 ENGSL-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
G L D+ + + R+ V +G+ YMH+H +IVHRD++
Sbjct: 104 TGGELFDEIIKRKR-----------FSEHDAARIIKQVFSGITYMHKH---NIVHRDLKP 149
Query: 460 NNIQLDSRFK---AKIANFSLA-------------------AP----ATNDVMPKFDVFA 493
NI L+S+ K KI +F L+ AP T D K DV++
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYD--EKCDVWS 207
Query: 494 FGVVLLELLSG 504
GV+L LLSG
Sbjct: 208 AGVILYILLSG 218
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +NH N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ LH + + +
Sbjct: 68 IVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +NH N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ LH + + +
Sbjct: 64 IVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ +V
Sbjct: 23 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIX--IV 80
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD
Sbjct: 81 TEYMSKGSLLDFLKGETGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRD 129
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+R NI + K+A+F LA AP K DV+
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 190 SFGILLTEL 198
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 71/256 (27%)
Query: 306 QNKLLPGVSGY----------------LGKPIVYEI--EVIMESTMNLSEHYSIGKSVYR 347
Q+ +L GVS Y LGKP+ +V+M +E I K +
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVM------AEAVGIDKDKPK 65
Query: 348 ATIDGKVLAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYE 398
+ +AVK +K+D TE E+ +++ I H N++ L+G + G +++ E
Sbjct: 66 EAV---TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVE 121
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSI 452
YA G+L ++L I +T+ + +A G++Y+ A
Sbjct: 122 YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA---------APATNDVMP---------------- 487
+HRD+ N+ + +IA+F LA TN +P
Sbjct: 179 IHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 488 KFDVFAFGVVLLELLS 503
+ DV++FGV++ E+ +
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 28/165 (16%)
Query: 329 MESTMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQR 373
+ S N + IG+ Y R + G+V+A+KKI+ D E+ +L+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 374 INHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRV 433
+NH N+VKL+ V ++ +LV+E+ + L K++ +
Sbjct: 62 LNHPNIVKLLDVIH-TENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIK--------SY 111
Query: 434 ALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA 153
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 28/149 (18%)
Query: 344 SVYRATIDG--KVLAVKKIK------------EDVTEELRILQRINHANLVKLMGVSSDS 389
+VY+A +++A+KKIK E+++LQ ++H N++ L+
Sbjct: 25 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG-H 83
Query: 390 QGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQ 449
+ N LV+++ E + LT S L GL+Y+H+H
Sbjct: 84 KSNISLVFDFMET----------DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW- 132
Query: 450 PSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I+HRD++ NN+ LD K+A+F LA
Sbjct: 133 --ILHRDLKPNNLLLDENGVLKLADFGLA 159
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKE-------DVTEELRILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G ++AVK+++ D E++IL+ ++ +VK GVS + + LV EY +G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
L +L L S+ L + + G++Y+ VHRD+ NI
Sbjct: 100 CLRDFLQRHRAR---------LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNIL 147
Query: 464 LDSRFKAKIANFSLAA--PATNDVM--------PKF----------------DVFAFGVV 497
++S KIA+F LA P D P F DV++FGVV
Sbjct: 148 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 207
Query: 498 LLELLS 503
L EL +
Sbjct: 208 LYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKE-------DVTEELRILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G ++AVK+++ D E++IL+ ++ +VK GVS + + LV EY +G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
L +L L S+ L + + G++Y+ VHRD+ NI
Sbjct: 99 CLRDFLQRHRAR---------LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNIL 146
Query: 464 LDSRFKAKIANFSLAA--PATNDVM--------PKF----------------DVFAFGVV 497
++S KIA+F LA P D P F DV++FGVV
Sbjct: 147 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 206
Query: 498 LLELLS 503
L EL +
Sbjct: 207 LYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIKE-------DVTEELRILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G ++AVK+++ D E++IL+ ++ +VK GVS + + LV EY +G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
L +L L S+ L + + G++Y+ VHRD+ NI
Sbjct: 112 CLRDFLQRHRAR---------LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNIL 159
Query: 464 LDSRFKAKIANFSLAA--PATNDVM--------PKF----------------DVFAFGVV 497
++S KIA+F LA P D P F DV++FGVV
Sbjct: 160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 219
Query: 498 LLELLS 503
L EL +
Sbjct: 220 LYELFT 225
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 28/163 (17%)
Query: 331 STMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRIN 375
S N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 376 HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL 435
H N+VKL+ V ++ +LV+E+ + L K++ +
Sbjct: 62 HPNIVKLLDVIH-TENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIK--------SYLF 111
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 46/186 (24%)
Query: 352 GKVLAVKKIK-------EDVTEELRILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENG 403
G ++AVK+++ D E++IL+ ++ +VK GVS + LV EY +G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 404 SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQ 463
L +L L S+ L + + G++Y+ VHRD+ NI
Sbjct: 96 CLRDFLQRHRAR---------LDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNIL 143
Query: 464 LDSRFKAKIANFSLAA--PATNDVM--------PKF----------------DVFAFGVV 497
++S KIA+F LA P D P F DV++FGVV
Sbjct: 144 VESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 203
Query: 498 LLELLS 503
L EL +
Sbjct: 204 LYELFT 209
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 35/166 (21%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 55 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSRFDEQ 112
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 113 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSV 160
Query: 478 AAPA--------TNDVMP-----------KFDVFAFGVVLLELLSG 504
AP+ T D +P K D+++ GV+ E L G
Sbjct: 161 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 35/166 (21%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++ + E+ I + H N+++L G D+ +L+ EYA G++ + L
Sbjct: 55 VEHQLRREVEIQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQ-KLSRFDEQ 112
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF--SL 477
++T ++AN L Y H ++HRDI+ N+ L S + KIA+F S+
Sbjct: 113 RTATYIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSV 160
Query: 478 AAPA--------TNDVMP-----------KFDVFAFGVVLLELLSG 504
AP+ T D +P K D+++ GV+ E L G
Sbjct: 161 HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 44/189 (23%)
Query: 344 SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLV 396
V+ T +G +A+K +K E +E ++++++ H LV+L V S+ ++V
Sbjct: 33 EVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIV 90
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
EY GSL +L +L Q + +A +A+G+ Y+ + VHRD
Sbjct: 91 TEYMSKGSLLDFLKGEMGK--------YLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 457 IRTNNIQLDSRFKAKIANFSLA---------------------APAT---NDVMPKFDVF 492
+ NI + K+A+F LA AP K DV+
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 493 AFGVVLLEL 501
+FG++L EL
Sbjct: 200 SFGILLTEL 208
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 28/165 (16%)
Query: 329 MESTMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQR 373
+ S N + IG+ Y R + G+V+A+KKI+ D E+ +L+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 374 INHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRV 433
+NH N+VKL+ V ++ +LV+E+ S+D L + L S +
Sbjct: 62 LNHPNIVKLLDVIH-TENKLYLVFEFL---SMD--LKDFMDASALTGIPLPLIKSYLFQ- 114
Query: 434 ALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 115 ---LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 28/165 (16%)
Query: 329 MESTMNLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQR 373
+ S N + IG+ Y R + G+V+A+KKI+ D E+ +L+
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 374 INHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRV 433
+NH N+VKL+ V ++ +LV+E+ S+D L + L S +
Sbjct: 61 LNHPNIVKLLDVIH-TENKLYLVFEFL---SMD--LKDFMDASALTGIPLPLIKSYLFQ- 113
Query: 434 ALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 114 ---LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 44/189 (23%)
Query: 355 LAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +K D TE E+ +++ I H N++ L+G + G +++ EYA G+L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNL 162
Query: 406 DKWLHPXXXXXXXXXXVIFLTWSQRLR------VALDVANGLQYMHEHAQPSIVHRDIRT 459
++L ++L A VA G++Y+ A +HRD+
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 219
Query: 460 NNIQLDSRFKAKIANFSLA---------APATNDVMP----------------KFDVFAF 494
N+ + KIA+F LA TN +P + DV++F
Sbjct: 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279
Query: 495 GVVLLELLS 503
GV+L E+ +
Sbjct: 280 GVLLWEIFT 288
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 56/194 (28%)
Query: 347 RATIDGKVLAVKKIKEDVTEELRILQRIN----------HANLVKLMGVSSDSQGNRFLV 396
R+ +G+ A+K +K+++ L+ ++ N H ++++ G D+Q F++
Sbjct: 26 RSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ-QIFMI 84
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLR------VALDVANGLQYMHEHAQP 450
+Y E G L L SQR A +V L+Y+H
Sbjct: 85 MDYIEGGEL----------------FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK--- 125
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSLA-----------------APATNDVMP---KFD 490
I++RD++ NI LD KI +F A AP P D
Sbjct: 126 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSID 185
Query: 491 VFAFGVVLLELLSG 504
++FG+++ E+L+G
Sbjct: 186 WWSFGILIYEMLAG 199
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 19/120 (15%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSD-SQGNRFLVYEYAENGSLDK--WLHPXXXXXXX 418
E V +E+ IL++++H N+VKL+ V D ++ + ++V+E G + + L P
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP------- 133
Query: 419 XXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
L+ Q D+ G++Y+H I+HRDI+ +N+ + KIA+F ++
Sbjct: 134 ------LSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+KKI+ D E+ +L+ +NH N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ +H + + +
Sbjct: 63 IVKLLDVIH-TENKLYLVFEH---------VHQDLKTFMDASALTGIPLPLIKSYLFQLL 112
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 71/256 (27%)
Query: 306 QNKLLPGVSGY----------------LGKPIVYEI--EVIMESTMNLSEHYSIGKSVYR 347
Q+ +L GVS Y LGKP+ +V+M +E I K +
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVM------AEAVGIDKDKPK 65
Query: 348 ATIDGKVLAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYE 398
+ +AVK +K+D TE E+ +++ I H N++ L+G + G +++
Sbjct: 66 EAV---TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVA 121
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSI 452
YA G+L ++L I +T+ + +A G++Y+ A
Sbjct: 122 YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA---------APATNDVMP---------------- 487
+HRD+ N+ + KIA+F LA TN +P
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 488 KFDVFAFGVVLLELLS 503
+ DV++FGV++ E+ +
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 98
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 99 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 44/189 (23%)
Query: 355 LAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +K D TE E+ +++ I H N++ L+G + G +++ EYA G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNL 121
Query: 406 DKWLHPXXXXXXXXXXVIFLTWSQRLR------VALDVANGLQYMHEHAQPSIVHRDIRT 459
++L ++L A VA G++Y+ A +HRD+
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 460 NNIQLDSRFKAKIANFSLA---------APATNDVMP----------------KFDVFAF 494
N+ + KIA+F LA TN +P + DV++F
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 495 GVVLLELLS 503
GV+L E+ +
Sbjct: 239 GVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 44/189 (23%)
Query: 355 LAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +K D TE E+ +++ I H N++ L+G + G +++ EYA G+L
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNL 113
Query: 406 DKWLHPXXXXXXXXXXVIFLTWSQRLR------VALDVANGLQYMHEHAQPSIVHRDIRT 459
++L ++L A VA G++Y+ A +HRD+
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 170
Query: 460 NNIQLDSRFKAKIANFSLA---------APATNDVMP----------------KFDVFAF 494
N+ + KIA+F LA TN +P + DV++F
Sbjct: 171 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 230
Query: 495 GVVLLELLS 503
GV+L E+ +
Sbjct: 231 GVLLWEIFT 239
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 34/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
I+ + EL++L N +V G S G + E+ + GSLD+ L
Sbjct: 57 IRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKEAKRIPEEI 115
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+V++ V GL Y+ E Q I+HRD++ +NI ++SR + K+ +F ++
Sbjct: 116 LG----------KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSG 163
Query: 480 PATNDVMPKF---------------------DVFAFGVVLLELLSGK 505
+ + F D+++ G+ L+EL G+
Sbjct: 164 QLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 50 ENIKKEIXINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 99
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 100 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 44/189 (23%)
Query: 355 LAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +K D TE E+ +++ I H N++ L+G + G +++ EYA G+L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNL 114
Query: 406 DKWLHPXXXXXXXXXXVIFLTWSQRLR------VALDVANGLQYMHEHAQPSIVHRDIRT 459
++L ++L A VA G++Y+ A +HRD+
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 171
Query: 460 NNIQLDSRFKAKIANFSLA---------APATNDVMP----------------KFDVFAF 494
N+ + KIA+F LA TN +P + DV++F
Sbjct: 172 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 231
Query: 495 GVVLLELLS 503
GV+L E+ +
Sbjct: 232 GVLLWEIFT 240
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+ KI+ D E+ +L+ +NH N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ LH + + +
Sbjct: 64 IVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 28/160 (17%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDV---------TEELRILQRINHAN 378
N + IG+ Y R + G+V+A+ KI+ D E+ +L+ +NH N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+VKL+ V ++ +LV+E+ LH + + +
Sbjct: 63 IVKLLDVIH-TENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL + H H ++HRD++ N+ +++ K+A+F LA
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 98
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 99 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 44/189 (23%)
Query: 355 LAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +K D TE E+ +++ I H N++ L+G + G +++ EYA G+L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNL 110
Query: 406 DKWLHPXXXXXXXXXXVIFLTWSQRLR------VALDVANGLQYMHEHAQPSIVHRDIRT 459
++L ++L A VA G++Y+ A +HRD+
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 167
Query: 460 NNIQLDSRFKAKIANFSLA---------APATNDVMP----------------KFDVFAF 494
N+ + KIA+F LA TN +P + DV++F
Sbjct: 168 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 227
Query: 495 GVVLLELLS 503
GV+L E+ +
Sbjct: 228 GVLLWEIFT 236
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 304 LAQNKLLPGVSGYLGKPIVYEIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKI 360
L Q +P +S KP + I ++ L + G+ V+ AT + +AVK +
Sbjct: 155 LCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM 214
Query: 361 K------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXX 414
K E E +++ + H LVKL V + +++ E+ GSL +L
Sbjct: 215 KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEP--IYIITEFMAKGSLLDFLKSDEG 272
Query: 415 XXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIAN 474
+I + +A G+ ++ Q + +HRD+R NI + + KIA+
Sbjct: 273 SKQPLPKLI--------DFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIAD 321
Query: 475 FSLA-----------APAT---NDVMPKFDVFAFGVVLLELLS 503
F LA AP K DV++FG++L+E+++
Sbjct: 322 FGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 44/189 (23%)
Query: 355 LAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +K D TE E+ +++ I H N++ L+G + G +++ EYA G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNL 121
Query: 406 DKWLHPXXXXXXXXXXVIFLTWSQRLR------VALDVANGLQYMHEHAQPSIVHRDIRT 459
++L ++L A VA G++Y+ A +HRD+
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 460 NNIQLDSRFKAKIANFSLA---------APATNDVMP----------------KFDVFAF 494
N+ + KIA+F LA TN +P + DV++F
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 495 GVVLLELLS 503
GV+L E+ +
Sbjct: 239 GVLLWEIFT 247
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 50 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 99
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 100 --IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 98
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 99 --IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 44/189 (23%)
Query: 355 LAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +K D TE E+ +++ I H N++ L+G + G +++ EYA G+L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNL 106
Query: 406 DKWLHPXXXXXXXXXXVIFLTWSQRLR------VALDVANGLQYMHEHAQPSIVHRDIRT 459
++L ++L A VA G++Y+ A +HRD+
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 163
Query: 460 NNIQLDSRFKAKIANFSLA---------APATNDVMP----------------KFDVFAF 494
N+ + KIA+F LA TN +P + DV++F
Sbjct: 164 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 223
Query: 495 GVVLLELLS 503
GV+L E+ +
Sbjct: 224 GVLLWEIFT 232
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 50 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 99
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 100 --IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 50 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 99
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 100 --IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 50 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 99
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 100 --IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 38/197 (19%)
Query: 318 GKPIVYEIEVIMESTMNLSEHYSIGKS----VYRATIDGKVLAVK----KIKEDVTEELR 369
G P++ ++ + T+ L E SIGK V+R G+ +AVK + + E
Sbjct: 18 GLPLL--VQRTIARTIVLQE--SIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAE 73
Query: 370 ILQRI--NHANLVKLMGVSSDSQG---NRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIF 424
I Q + H N++ + + G +LV +Y E+GSL +L+
Sbjct: 74 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT----------- 122
Query: 425 LTWSQRLRVALDVANGLQYMH-----EHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA- 478
+T +++AL A+GL ++H +P+I HRD+++ NI + IA+ LA
Sbjct: 123 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 182
Query: 479 ----APATNDVMPKFDV 491
A T D+ P V
Sbjct: 183 RHDSATDTIDIAPNHRV 199
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 44/189 (23%)
Query: 355 LAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +K D TE E+ +++ I H N++ L+G + G +++ EYA G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNL 121
Query: 406 DKWLHPXXXXXXXXXXVIFLTWSQRLR------VALDVANGLQYMHEHAQPSIVHRDIRT 459
++L ++L A VA G++Y+ A +HRD+
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 460 NNIQLDSRFKAKIANFSLA---------APATNDVMP----------------KFDVFAF 494
N+ + KIA+F LA TN +P + DV++F
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 495 GVVLLELLS 503
GV+L E+ +
Sbjct: 239 GVLLWEIFT 247
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 34/146 (23%)
Query: 352 GKVLAVKKIKEDVTEE------------LRILQRINHANLVKLMGVSSDSQGNR----FL 395
G+ +A+K+++ EE LR L+ H N+V+L V + S+ +R L
Sbjct: 37 GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 96
Query: 396 VYEYAENG---SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSI 452
V+E+ + LDK P + Q LR GL ++H H +
Sbjct: 97 VFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-----QLLR-------GLDFLHSH---RV 141
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA 478
VHRD++ NI + S + K+A+F LA
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 38/197 (19%)
Query: 318 GKPIVYEIEVIMESTMNLSEHYSIGKS----VYRATIDGKVLAVK----KIKEDVTEELR 369
G P++ ++ + T+ L E SIGK V+R G+ +AVK + + E
Sbjct: 31 GLPLL--VQRTIARTIVLQE--SIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAE 86
Query: 370 ILQRI--NHANLVKLMGVSSDSQG---NRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIF 424
I Q + H N++ + + G +LV +Y E+GSL +L+
Sbjct: 87 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT----------- 135
Query: 425 LTWSQRLRVALDVANGLQYMH-----EHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA- 478
+T +++AL A+GL ++H +P+I HRD+++ NI + IA+ LA
Sbjct: 136 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 195
Query: 479 ----APATNDVMPKFDV 491
A T D+ P V
Sbjct: 196 RHDSATDTIDIAPNHRV 212
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 71/256 (27%)
Query: 306 QNKLLPGVSGY----------------LGKPIVYEI--EVIMESTMNLSEHYSIGKSVYR 347
Q+ +L GVS Y LGKP+ +V+M +E I K +
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVM------AEAVGIDKDKPK 65
Query: 348 ATIDGKVLAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYE 398
+ +AVK +K+D TE E+ +++ I H N++ L+G + G +++
Sbjct: 66 EAV---TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVG 121
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVI------FLTWSQRLRVALDVANGLQYMHEHAQPSI 452
YA G+L ++L I +T+ + +A G++Y+ A
Sbjct: 122 YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 178
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA---------APATNDVMP---------------- 487
+HRD+ N+ + KIA+F LA TN +P
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 488 KFDVFAFGVVLLELLS 503
+ DV++FGV++ E+ +
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 42/170 (24%)
Query: 373 RINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLR 432
+++H N+V ++ V + +LV EY E +L +++ L+ +
Sbjct: 67 QLSHQNIVSMIDVDEEDDC-YYLVMEYIEGPTLSEYIESHGP----------LSVDTAIN 115
Query: 433 VALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAP-------ATNDV 485
+ +G+++ H+ IVHRDI+ NI +DS KI +F +A TN V
Sbjct: 116 FTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHV 172
Query: 486 MPKF-----------------DVFAFGVVLLELLSGKKATRTTENGKTAV 518
+ D+++ G+VL E+L G+ NG+TAV
Sbjct: 173 LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF----NGETAV 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 34/146 (23%)
Query: 352 GKVLAVKKIKEDVTEE------------LRILQRINHANLVKLMGVSSDSQGNR----FL 395
G+ +A+K+++ EE LR L+ H N+V+L V + S+ +R L
Sbjct: 37 GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 96
Query: 396 VYEYAENG---SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSI 452
V+E+ + LDK P + Q LR GL ++H H +
Sbjct: 97 VFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-----QLLR-------GLDFLHSH---RV 141
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA 478
VHRD++ NI + S + K+A+F LA
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 34/146 (23%)
Query: 352 GKVLAVKKIKEDVTEE------------LRILQRINHANLVKLMGVSSDSQGNR----FL 395
G+ +A+K+++ EE LR L+ H N+V+L V + S+ +R L
Sbjct: 37 GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 96
Query: 396 VYEYAENG---SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSI 452
V+E+ + LDK P + Q LR GL ++H H +
Sbjct: 97 VFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-----QLLR-------GLDFLHSH---RV 141
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLA 478
VHRD++ NI + S + K+A+F LA
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 50 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 99
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 100 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 98
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 99 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 48 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 97
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 98 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 44/189 (23%)
Query: 355 LAVKKIKEDVTE--------ELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +K D TE E+ +++ I H N++ L+G + G +++ EYA G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNL 121
Query: 406 DKWLHPXX------XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
++L L+ + A VA G++Y+ A +HRD+
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 460 NNIQLDSRFKAKIANFSLA---------APATNDVMP----------------KFDVFAF 494
N+ + KIA+F LA TN +P + DV++F
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 495 GVVLLELLS 503
GV+L E+ +
Sbjct: 239 GVLLWEIFT 247
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 98
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 99 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 98
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 99 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 98
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 99 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 50 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 99
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 100 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 98
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 99 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 98
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 99 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 49/185 (26%)
Query: 355 LAVKKIKEDVTEELR--------ILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+A+K +K TE+ R I+ + +H N++ L GV + S ++ E+ ENGSLD
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKST-PVMIITEFMENGSLD 96
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L T Q + + +A G++Y+ A + VHR + NI ++S
Sbjct: 97 SFLRQNDGQ---------FTVIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNS 144
Query: 467 RFKAKIANFSLAAPATNDV------------MP------------KF----DVFAFGVVL 498
K+++F L+ +D +P KF DV+++G+V+
Sbjct: 145 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 204
Query: 499 LELLS 503
E++S
Sbjct: 205 WEVMS 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 98
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 99 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 98
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 99 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 34/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
I+ + EL++L N +V G S G + E+ + GSLD+ L
Sbjct: 50 IRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRIPEQI 108
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+V++ V GL Y+ E + I+HRD++ +NI ++SR + K+ +F ++
Sbjct: 109 LG----------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSG 156
Query: 480 PATNDVMPKF---------------------DVFAFGVVLLELLSGK 505
+++ +F D+++ G+ L+E+ G+
Sbjct: 157 QLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 340 SIGKS----VYRATIDGKVLAVK----KIKEDVTEELRILQRI--NHANLVKLMGVSSDS 389
SIGK V+R G+ +AVK + + E I Q + H N++ + +
Sbjct: 16 SIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 75
Query: 390 QGNR---FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMH- 445
G +LV +Y E+GSL +L+ +T +++AL A+GL ++H
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFDYLNRYT-----------VTVEGMIKLALSTASGLAHLHM 124
Query: 446 ----EHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-----APATNDVMPKFDV 491
+P+I HRD+++ NI + IA+ LA A T D+ P V
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 179
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 340 SIGKS----VYRATIDGKVLAVK----KIKEDVTEELRILQRI--NHANLVKLMGVSSDS 389
SIGK V+R G+ +AVK + + E I Q + H N++ + +
Sbjct: 11 SIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 70
Query: 390 QGNR---FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMH- 445
G +LV +Y E+GSL +L+ +T +++AL A+GL ++H
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYLNRYT-----------VTVEGMIKLALSTASGLAHLHM 119
Query: 446 ----EHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-----APATNDVMPKFDV 491
+P+I HRD+++ NI + IA+ LA A T D+ P V
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 174
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 340 SIGKS----VYRATIDGKVLAVK----KIKEDVTEELRILQRI--NHANLVKLMGVSSDS 389
SIGK V+R G+ +AVK + + E I Q + H N++ + +
Sbjct: 13 SIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 72
Query: 390 QGNR---FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMH- 445
G +LV +Y E+GSL +L+ +T +++AL A+GL ++H
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFDYLNRYT-----------VTVEGMIKLALSTASGLAHLHM 121
Query: 446 ----EHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-----APATNDVMPKFDV 491
+P+I HRD+++ NI + IA+ LA A T D+ P V
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 176
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 82/213 (38%), Gaps = 66/213 (30%)
Query: 345 VYRAT--IDGKVLAVKKIK---EDVTEELRILQRINHANLVKLMG----------VSSDS 389
V++A IDGK ++++K E E++ L +++H N+V G S DS
Sbjct: 28 VFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDS 87
Query: 390 ------------QGNR------FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRL 431
+R F+ E+ + G+L++W+ L
Sbjct: 88 LESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA--------L 139
Query: 432 RVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATN-------- 483
+ + G+ Y+H ++HRD++ +NI L + KI +F L N
Sbjct: 140 ELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK 196
Query: 484 --------------DVMPKFDVFAFGVVLLELL 502
D + D++A G++L ELL
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 13/143 (9%)
Query: 336 SEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFL 395
+E G V ID K + + + V E++I ++ H ++++L DS +L
Sbjct: 30 AESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN-YVYL 88
Query: 396 VYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHR 455
V E NG ++++L V + ++ + G+ Y+H H I+HR
Sbjct: 89 VLEMCHNGEMNRYL---------KNRVKPFSENEARHFMHQIITGMLYLHSHG---ILHR 136
Query: 456 DIRTNNIQLDSRFKAKIANFSLA 478
D+ +N+ L KIA+F LA
Sbjct: 137 DLTLSNLLLTRNMNIKIADFGLA 159
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I + +NH N+VK G +GN ++L EY G L + P
Sbjct: 49 ENIKKEICINKMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 98
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 99 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 53/189 (28%)
Query: 352 GKVLAVKK---------IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAEN 402
G+++A+KK IK+ E+R+L+++ H NLV L+ V + LV+EY ++
Sbjct: 28 GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR-RLHLVFEYCDH 86
Query: 403 ---GSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
LD++ V +TW + + H+H + +HRD++
Sbjct: 87 TVLHELDRY-----QRGVPEHLVKSITWQ--------TLQAVNFCHKH---NCIHRDVKP 130
Query: 460 NNIQLDSRFKAKIANFSLAAPATN------------------------DVMPKFDVFAFG 495
NI + K+ +F A T P DV+A G
Sbjct: 131 ENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIG 190
Query: 496 VVLLELLSG 504
V ELLSG
Sbjct: 191 CVFAELLSG 199
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 340 SIGKS----VYRATIDGKVLAVK----KIKEDVTEELRILQRI--NHANLVKLMGVSSDS 389
SIGK V+R G+ +AVK + + E I Q + H N++ + +
Sbjct: 10 SIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 69
Query: 390 QGNR---FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMH- 445
G +LV +Y E+GSL +L+ +T +++AL A+GL ++H
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYLNRYT-----------VTVEGMIKLALSTASGLAHLHM 118
Query: 446 ----EHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-----APATNDVMPKFDV 491
+P+I HRD+++ NI + IA+ LA A T D+ P V
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 173
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 48/195 (24%)
Query: 345 VYRAT-IDGKVLAVKKIKEDVTEE---------LRILQRINHANLVKLMGVSSDSQGNRF 394
VY+A G+++A+K+I+ D +E + +L+ ++H N+V L+ V S+
Sbjct: 37 VYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH-SERCLT 95
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV+E+ E L K L I+L Q LR G+ + H+H I+H
Sbjct: 96 LVFEFMEK-DLKKVLDENKTGLQDSQIKIYLY--QLLR-------GVAHCHQH---RILH 142
Query: 455 RDIRTNNIQLDSRFKAKIANFSLA--------------------AP----ATNDVMPKFD 490
RD++ N+ ++S K+A+F LA AP + D
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 491 VFAFGVVLLELLSGK 505
+++ G + E+++GK
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 48/195 (24%)
Query: 345 VYRAT-IDGKVLAVKKIKEDVTEE---------LRILQRINHANLVKLMGVSSDSQGNRF 394
VY+A G+++A+K+I+ D +E + +L+ ++H N+V L+ V S+
Sbjct: 37 VYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH-SERCLT 95
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV+E+ E L K L I+L Q LR G+ + H+H I+H
Sbjct: 96 LVFEFMEK-DLKKVLDENKTGLQDSQIKIYLY--QLLR-------GVAHCHQH---RILH 142
Query: 455 RDIRTNNIQLDSRFKAKIANFSLA--------------------AP----ATNDVMPKFD 490
RD++ N+ ++S K+A+F LA AP + D
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 491 VFAFGVVLLELLSGK 505
+++ G + E+++GK
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 60/222 (27%)
Query: 328 IMESTMNLSEHYS----IGKSVY------RATIDGKVLAVKKI----------KEDVTEE 367
+ ST S+ Y +GK + + I G+ AVK I KE + E
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 82
Query: 368 LRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXXVIFLT 426
+++L++++H N++KL D +G +LV E G L D+ +
Sbjct: 83 VQLLKQLDHPNIMKLYEFFED-KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------ 135
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSL-----A 478
R+ V +G+ YMH++ IVHRD++ N+ L+S+ K +I +F L A
Sbjct: 136 -----RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 187
Query: 479 APATND-------VMP---------KFDVFAFGVVLLELLSG 504
+ D + P K DV++ GV+L LLSG
Sbjct: 188 SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 43/190 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
+K+++ E ++Q++++ +V+++G+ + LV E AE G L+K+L
Sbjct: 55 LKDELLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKN 112
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+ + V+ G++Y+ E + VHRD+ N+ L ++ AKI++F L+
Sbjct: 113 I----------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK 159
Query: 480 PATND--------------------------VMPKFDVFAFGVVLLELLS-GKKATRTTE 512
D K DV++FGV++ E S G+K R +
Sbjct: 160 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
Query: 513 NGK-TAVLWK 521
+ TA+L K
Sbjct: 220 GSEVTAMLEK 229
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 43/190 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
+K+++ E ++Q++++ +V+++G+ + LV E AE G L+K+L
Sbjct: 414 LKDELLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKN 471
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+ + V+ G++Y+ E + VHRD+ N+ L ++ AKI++F L+
Sbjct: 472 I----------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 518
Query: 480 PATND--------------------------VMPKFDVFAFGVVLLELLS-GKKATRTTE 512
D K DV++FGV++ E S G+K R +
Sbjct: 519 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 578
Query: 513 NGK-TAVLWK 521
+ TA+L K
Sbjct: 579 GSEVTAMLEK 588
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 26/177 (14%)
Query: 352 GKVLAVKKIKEDVTE--------ELRILQRINHANLVKLMGVSSDSQGNR-----FLVYE 398
G+ +A+K+ +++++ E++I++++NH N+V V Q L E
Sbjct: 39 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIR 458
Y E G L K+L+ I S D+++ L+Y+HE+ I+HRD++
Sbjct: 99 YCEGGDLRKYLNQFENCCGLKEGPIRTLLS-------DISSALRYLHEN---RIIHRDLK 148
Query: 459 TNNIQLD---SRFKAKIANFSLAAPATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
NI L R KI + A + V + ELL KK T T +
Sbjct: 149 PENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVD 205
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 26/177 (14%)
Query: 352 GKVLAVKKIKEDVTE--------ELRILQRINHANLVKLMGVSSDSQGNR-----FLVYE 398
G+ +A+K+ +++++ E++I++++NH N+V V Q L E
Sbjct: 40 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 99
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIR 458
Y E G L K+L+ I S D+++ L+Y+HE+ I+HRD++
Sbjct: 100 YCEGGDLRKYLNQFENCCGLKEGPIRTLLS-------DISSALRYLHEN---RIIHRDLK 149
Query: 459 TNNIQLD---SRFKAKIANFSLAAPATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
NI L R KI + A + V + ELL KK T T +
Sbjct: 150 PENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVD 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXX 420
E++ +E+ I +NH N+VK G +GN ++L EY G L + P
Sbjct: 50 ENIKKEICINAMLNHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPD-------- 99
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I + R + G+ Y+H I HRDI+ N+ LD R KI++F LA
Sbjct: 100 --IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 43/190 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
+K+++ E ++Q++++ +V+++G+ + LV E AE G L+K+L
Sbjct: 413 LKDELLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKN 470
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+ + V+ G++Y+ E + VHRD+ N+ L ++ AKI++F L+
Sbjct: 471 I----------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 517
Query: 480 PATND--------------------------VMPKFDVFAFGVVLLELLS-GKKATRTTE 512
D K DV++FGV++ E S G+K R +
Sbjct: 518 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 577
Query: 513 NGK-TAVLWK 521
+ TA+L K
Sbjct: 578 GSEVTAMLEK 587
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 43/190 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
+K+++ E ++Q++++ +V+++G+ + LV E AE G L+K+L
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKN 128
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+ + V+ G++Y+ E + VHRD+ N+ L ++ AKI++F L+
Sbjct: 129 I----------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 175
Query: 480 PATND--------------------------VMPKFDVFAFGVVLLELLS-GKKATRTTE 512
D K DV++FGV++ E S G+K R +
Sbjct: 176 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 235
Query: 513 NGK-TAVLWK 521
+ TA+L K
Sbjct: 236 GSEVTAMLEK 245
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 43/190 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
+K+++ E ++Q++++ +V+++G+ + LV E AE G L+K+L
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKN 128
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+ + V+ G++Y+ E + VHRD+ N+ L ++ AKI++F L+
Sbjct: 129 I----------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 175
Query: 480 PATND--------------------------VMPKFDVFAFGVVLLELLS-GKKATRTTE 512
D K DV++FGV++ E S G+K R +
Sbjct: 176 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 235
Query: 513 NGK-TAVLWK 521
+ TA+L K
Sbjct: 236 GSEVTAMLEK 245
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 43/190 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
+K+++ E ++Q++++ +V+++G+ + LV E AE G L+K+L
Sbjct: 55 LKDELLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKN 112
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+ + V+ G++Y+ E + VHRD+ N+ L ++ AKI++F L+
Sbjct: 113 I----------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK 159
Query: 480 PATND--------------------------VMPKFDVFAFGVVLLELLS-GKKATRTTE 512
D K DV++FGV++ E S G+K R +
Sbjct: 160 ALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
Query: 513 NGK-TAVLWK 521
+ TA+L K
Sbjct: 220 GSEVTAMLEK 229
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 43/190 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
+K+++ E ++Q++++ +V+++G+ + LV E AE G L+K+L
Sbjct: 69 LKDELLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKN 126
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+ + V+ G++Y+ E + VHRD+ N+ L ++ AKI++F L+
Sbjct: 127 I----------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK 173
Query: 480 PATND--------------------------VMPKFDVFAFGVVLLELLS-GKKATRTTE 512
D K DV++FGV++ E S G+K R +
Sbjct: 174 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 233
Query: 513 NGK-TAVLWK 521
+ TA+L K
Sbjct: 234 GSEVTAMLEK 243
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 345 VYRATID-GKVLAVKKI---KED------VTEELRILQRINHANLVKLMGVSSDSQGNRF 394
VY+A + G+ A+KKI KED E+ IL+ + H+N+VKL V ++
Sbjct: 18 VYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-TKKRLV 76
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV+E+ + L K L FL L + NG+ Y H+ ++H
Sbjct: 77 LVFEHLDQ-DLKKLLDVCEGGLESVTAKSFL---------LQLLNGIAYCHDR---RVLH 123
Query: 455 RDIRTNNIQLDSRFKAKIANFSLA 478
RD++ N+ ++ + KIA+F LA
Sbjct: 124 RDLKPQNLLINREGELKIADFGLA 147
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 345 VYRATID-GKVLAVKKI---KED------VTEELRILQRINHANLVKLMGVSSDSQGNRF 394
VY+A + G+ A+KKI KED E+ IL+ + H+N+VKL V ++
Sbjct: 18 VYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-TKKRLV 76
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV+E+ + L K L FL L + NG+ Y H+ ++H
Sbjct: 77 LVFEHLDQ-DLKKLLDVCEGGLESVTAKSFL---------LQLLNGIAYCHDR---RVLH 123
Query: 455 RDIRTNNIQLDSRFKAKIANFSLA 478
RD++ N+ ++ + KIA+F LA
Sbjct: 124 RDLKPQNLLINREGELKIADFGLA 147
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 43/190 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
+K+++ E ++Q++++ +V+++G+ + LV E AE G L+K+L
Sbjct: 61 LKDELLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKN 118
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+ + V+ G++Y+ E + VHRD+ N+ L ++ AKI++F L+
Sbjct: 119 I----------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK 165
Query: 480 PATND--------------------------VMPKFDVFAFGVVLLELLS-GKKATRTTE 512
D K DV++FGV++ E S G+K R +
Sbjct: 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225
Query: 513 NGK-TAVLWK 521
+ TA+L K
Sbjct: 226 GSEVTAMLEK 235
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 345 VYRATID-GKVLAVKKI---KED------VTEELRILQRINHANLVKLMGVSSDSQGNRF 394
VY+A + G+ A+KKI KED E+ IL+ + H+N+VKL V ++
Sbjct: 18 VYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-TKKRLV 76
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV+E+ + L K L FL L + NG+ Y H+ ++H
Sbjct: 77 LVFEHLDQ-DLKKLLDVCEGGLESVTAKSFL---------LQLLNGIAYCHDR---RVLH 123
Query: 455 RDIRTNNIQLDSRFKAKIANFSLA 478
RD++ N+ ++ + KIA+F LA
Sbjct: 124 RDLKPQNLLINREGELKIADFGLA 147
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 43/190 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
+K+++ E ++Q++++ +V+++G+ + LV E AE G L+K+L
Sbjct: 51 LKDELLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKN 108
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+ + V+ G++Y+ E + VHRD+ N+ L ++ AKI++F L+
Sbjct: 109 I----------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK 155
Query: 480 PATND--------------------------VMPKFDVFAFGVVLLELLS-GKKATRTTE 512
D K DV++FGV++ E S G+K R +
Sbjct: 156 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 215
Query: 513 NGK-TAVLWK 521
+ TA+L K
Sbjct: 216 GSEVTAMLEK 225
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 24/164 (14%)
Query: 339 YSIGKSVY------RATIDGKVLAVKKI---------KEDVTEELRILQRINHANLVKLM 383
Y+IG Y R DGK+L K++ K+ + E+ +L+ + H N+V+
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 384 GVSSD-SQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
D + ++V EY E G L + +L LRV + L+
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ------YLDEEFVLRVMTQLTLALK 125
Query: 443 YMHEHAQP--SIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
H + +++HRD++ N+ LD + K+ +F LA +D
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 24/164 (14%)
Query: 339 YSIGKSVY------RATIDGKVLAVKKI---------KEDVTEELRILQRINHANLVKLM 383
Y+IG Y R DGK+L K++ K+ + E+ +L+ + H N+V+
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 384 GVSSD-SQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
D + ++V EY E G L + +L LRV + L+
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ------YLDEEFVLRVMTQLTLALK 125
Query: 443 YMHEHAQP--SIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
H + +++HRD++ N+ LD + K+ +F LA +D
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 43/190 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
+K+++ E ++Q++++ +V+++G+ + LV E AE G L+K+L
Sbjct: 49 LKDELLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKN 106
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+ + V+ G++Y+ E + VHRD+ N+ L ++ AKI++F L+
Sbjct: 107 I----------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK 153
Query: 480 PATND--------------------------VMPKFDVFAFGVVLLELLS-GKKATRTTE 512
D K DV++FGV++ E S G+K R +
Sbjct: 154 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 213
Query: 513 NGK-TAVLWK 521
+ TA+L K
Sbjct: 214 GSEVTAMLEK 223
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 34/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
I+ + EL++L N +V G S G + E+ + GSLD+ L
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+V++ V GL Y+ E + I+HRD++ +NI ++SR + K+ +F ++
Sbjct: 106 LG----------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSG 153
Query: 480 PATNDVMPKF---------------------DVFAFGVVLLELLSGK 505
+ + F D+++ G+ L+E+ G+
Sbjct: 154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 34/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
I+ + EL++L N +V G S G + E+ + GSLD+ L
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+V++ V GL Y+ E + I+HRD++ +NI ++SR + K+ +F ++
Sbjct: 106 LG----------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSG 153
Query: 480 PATNDVMPKF---------------------DVFAFGVVLLELLSGK 505
+ + F D+++ G+ L+E+ G+
Sbjct: 154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 24/164 (14%)
Query: 339 YSIGKSVY------RATIDGKVLAVKKI---------KEDVTEELRILQRINHANLVKLM 383
Y+IG Y R DGK+L K++ K+ + E+ +L+ + H N+V+
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 384 GVSSD-SQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQ 442
D + ++V EY E G L + +L LRV + L+
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ------YLDEEFVLRVMTQLTLALK 125
Query: 443 YMHEHAQP--SIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
H + +++HRD++ N+ LD + K+ +F LA +D
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT+ + + ++HA++V+L+G+ S LV +Y GSL L +
Sbjct: 80 VTDHMLAIGSLDHAHIVRLLGLCPGSSLQ--LVTQYLPLGSL---LDHVRQHRGALGPQL 134
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATN 483
L W + +A G+ Y+ EH +VHR++ N+ L S + ++A+F +A
Sbjct: 135 LLNW------GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVA----- 180
Query: 484 DVMPKFD 490
D++P D
Sbjct: 181 DLLPPDD 187
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 84 VTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 133
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 134 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 189
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 221
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 34/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
I+ + EL++L N +V G S G + E+ + GSLD+ L
Sbjct: 109 IRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRIPEQI 167
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+V++ V GL Y+ E + I+HRD++ +NI ++SR + K+ +F ++
Sbjct: 168 LG----------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSG 215
Query: 480 PATNDVMPKF---------------------DVFAFGVVLLELLSGK 505
+ + F D+++ G+ L+E+ G+
Sbjct: 216 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 34/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
I+ + EL++L N +V G S G + E+ + GSLD+ L
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+V++ V GL Y+ E + I+HRD++ +NI ++SR + K+ +F ++
Sbjct: 106 LG----------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSG 153
Query: 480 PATNDVMPKF---------------------DVFAFGVVLLELLSGK 505
+ + F D+++ G+ L+E+ G+
Sbjct: 154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 34/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
I+ + EL++L N +V G S G + E+ + GSLD+ L
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+V++ V GL Y+ E + I+HRD++ +NI ++SR + K+ +F ++
Sbjct: 106 LG----------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSG 153
Query: 480 PATNDVMPKF---------------------DVFAFGVVLLELLSGK 505
+ + F D+++ G+ L+E+ G+
Sbjct: 154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXX 421
ED E+ IL +H N+VKL+ + N +++ E+ G++D +
Sbjct: 52 EDYMVEIDILASCDHPNIVKLLDAFY-YENNLWILIEFCAGGAVDAVMLELERP------ 104
Query: 422 VIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPA 481
LT SQ V + L Y+H++ I+HRD++ NI K+A+F ++A
Sbjct: 105 ---LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 158
Query: 482 TNDVMPKFDVF 492
T + + D F
Sbjct: 159 TRTXIQRRDSF 169
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT+ + + ++HA++V+L+G+ S LV +Y GSL L +
Sbjct: 62 VTDHMLAIGSLDHAHIVRLLGLCPGSSLQ--LVTQYLPLGSL---LDHVRQHRGALGPQL 116
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATN 483
L W + +A G+ Y+ EH +VHR++ N+ L S + ++A+F +A
Sbjct: 117 LLNW------GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVA----- 162
Query: 484 DVMPKFD 490
D++P D
Sbjct: 163 DLLPPDD 169
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 82 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 131
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 132 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 187
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 188 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 219
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 126
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 127 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 182
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 214
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 361 KEDVTEELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
KE + EL+I+ + H N+V L+G + G ++ EY G L +L
Sbjct: 85 KEALMSELKIMSHLGQHENIVNLLGACTHG-GPVLVITEYCCYGDLLNFLRRKAEADLDK 143
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
L L + VA G+ ++ A + +HRD+ N+ L + AKI +F LA
Sbjct: 144 EDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
Query: 480 PATND 484
ND
Sbjct: 201 DIMND 205
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 34/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
I+ + EL++L N +V G S G + E+ + GSLD+ L
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+V++ V GL Y+ E + I+HRD++ +NI ++SR + K+ +F ++
Sbjct: 106 LG----------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSG 153
Query: 480 PATNDVMPKF---------------------DVFAFGVVLLELLSGK 505
+ + F D+++ G+ L+E+ G+
Sbjct: 154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 126
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 127 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 182
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 214
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 57 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 106
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 107 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 162
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 163 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 194
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 128
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 129 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 60/222 (27%)
Query: 328 IMESTMNLSEHYS----IGKSVY------RATIDGKVLAVKKI----------KEDVTEE 367
+ ST S+ Y +GK + + I G+ AVK I KE + E
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 368 LRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXXVIFLT 426
+++L++++H N++KL D +G +LV E G L D+ + +
Sbjct: 100 VQLLKQLDHPNIMKLYEFFED-KGYFYLVGEVYTGGELFDEIISRKR-----------FS 147
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSL-----A 478
R+ V +G+ YMH++ IVHRD++ N+ L+S+ K +I +F L A
Sbjct: 148 EVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 204
Query: 479 APATND-------VMP---------KFDVFAFGVVLLELLSG 504
+ D + P K DV++ GV+L LLSG
Sbjct: 205 SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 60/222 (27%)
Query: 328 IMESTMNLSEHYS----IGKSVY------RATIDGKVLAVKKI----------KEDVTEE 367
+ ST S+ Y +GK + + I G+ AVK I KE + E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 368 LRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXXVIFLT 426
+++L++++H N++KL D +G +LV E G L D+ + +
Sbjct: 77 VQLLKQLDHPNIMKLYEFFED-KGYFYLVGEVYTGGELFDEIISRKR-----------FS 124
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSL-----A 478
R+ V +G+ YMH++ IVHRD++ N+ L+S+ K +I +F L A
Sbjct: 125 EVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181
Query: 479 APATND-------VMP---------KFDVFAFGVVLLELLSG 504
+ D + P K DV++ GV+L LLSG
Sbjct: 182 SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 126
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 127 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 182
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 214
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 34/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
I+ + EL++L N +V G S G + E+ + GSLD+ L
Sbjct: 66 IRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRIPEQI 124
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+V++ V GL Y+ E + I+HRD++ +NI ++SR + K+ +F ++
Sbjct: 125 LG----------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSG 172
Query: 480 PATNDVMPKF---------------------DVFAFGVVLLELLSGK 505
+ + F D+++ G+ L+E+ G+
Sbjct: 173 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGCLLKYIRKIGS--------- 128
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 129 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A+++++
Sbjct: 185 ESKQARANSFVGTAQYVSPELLTEKSASKSSD 216
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 60/222 (27%)
Query: 328 IMESTMNLSEHYS----IGKSVY------RATIDGKVLAVKKI----------KEDVTEE 367
+ ST S+ Y +GK + + I G+ AVK I KE + E
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 100
Query: 368 LRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXXVIFLT 426
+++L++++H N++KL D +G +LV E G L D+ + +
Sbjct: 101 VQLLKQLDHPNIMKLYEFFED-KGYFYLVGEVYTGGELFDEIISRKR-----------FS 148
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSL-----A 478
R+ V +G+ YMH++ IVHRD++ N+ L+S+ K +I +F L A
Sbjct: 149 EVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 205
Query: 479 APATND-------VMP---------KFDVFAFGVVLLELLSG 504
+ D + P K DV++ GV+L LLSG
Sbjct: 206 SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 128
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 129 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 128
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 129 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 129
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 130 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 185
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 186 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 217
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 85/217 (39%), Gaps = 63/217 (29%)
Query: 345 VYRATIDGKVLAVKKIK-EDVTEELRILQRIN-----HANLVKLMG---VSSDSQGNRFL 395
V+R + G+ +AVK D R + N H N++ + S S +L
Sbjct: 53 VWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 112
Query: 396 VYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMH-----EHAQP 450
+ Y E GSL +L + L LR+ L +A+GL ++H +P
Sbjct: 113 ITHYHEMGSLYDYLQ-----------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 161
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSLA---APATN------------------------ 483
+I HRD+++ NI + + IA+ LA + +TN
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 221
Query: 484 ------DVMPKFDVFAFGVVLLELLSGKKATRTTENG 514
D + D++AFG+VL E+ A R NG
Sbjct: 222 IQVDCFDSYKRVDIWAFGLVLWEV-----ARRMVSNG 253
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 128
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 129 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 76 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 125
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 126 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 181
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 182 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 213
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 56 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 105
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 106 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 161
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 162 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 193
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 58/196 (29%)
Query: 347 RATIDGKVLAVKKIKEDVT--------EELRILQRINHANLVKLMGVSSDSQGNRFLVYE 398
R D ++AVK +E + +E RIL++ +H N+V+L+GV + Q ++V E
Sbjct: 134 RLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-PIYIVME 192
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL------DVANGLQYMHEHAQPSI 452
+ G +L T RLRV D A G++Y+
Sbjct: 193 LVQGGDFLTFLR---------------TEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMP------------------------- 487
+HRD+ N + + KI++F ++ + V
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 488 KFDVFAFGVVLLELLS 503
+ DV++FG++L E S
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 55 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 104
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 105 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 160
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 161 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 192
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 361 KEDVTEELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
KE + EL+I+ + H N+V L+G + G ++ EY G L +L
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHG-GPVLVITEYCCYGDLLNFLRRKAEADLDK 151
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
L L + VA G+ ++ A + +HRD+ N+ L + AKI +F LA
Sbjct: 152 EDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
Query: 480 PATND 484
ND
Sbjct: 209 DIMND 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 34/167 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
I+ + EL++L N +V G S G + E+ + GSLD+ L
Sbjct: 74 IRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRIPEQI 132
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+V++ V GL Y+ E + I+HRD++ +NI ++SR + K+ +F ++
Sbjct: 133 LG----------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSG 180
Query: 480 PATNDVMPKF---------------------DVFAFGVVLLELLSGK 505
+ + F D+++ G+ L+E+ G+
Sbjct: 181 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 54 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 103
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 104 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 159
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 160 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 191
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 85/217 (39%), Gaps = 63/217 (29%)
Query: 345 VYRATIDGKVLAVKKIK-EDVTEELRILQRIN-----HANLVKLMG---VSSDSQGNRFL 395
V+R + G+ +AVK D R + N H N++ + S S +L
Sbjct: 24 VWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83
Query: 396 VYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMH-----EHAQP 450
+ Y E GSL +L + L LR+ L +A+GL ++H +P
Sbjct: 84 ITHYHEMGSLYDYLQ-----------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSLA---APATN------------------------ 483
+I HRD+++ NI + + IA+ LA + +TN
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 484 ------DVMPKFDVFAFGVVLLELLSGKKATRTTENG 514
D + D++AFG+VL E+ A R NG
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEV-----ARRMVSNG 224
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 58/196 (29%)
Query: 347 RATIDGKVLAVKKIKEDVT--------EELRILQRINHANLVKLMGVSSDSQGNRFLVYE 398
R D ++AVK +E + +E RIL++ +H N+V+L+GV + Q ++V E
Sbjct: 134 RLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-PIYIVME 192
Query: 399 YAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVAL------DVANGLQYMHEHAQPSI 452
+ G +L T RLRV D A G++Y+
Sbjct: 193 LVQGGDFLTFLR---------------TEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMP------------------------- 487
+HRD+ N + + KI++F ++ + V
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 488 KFDVFAFGVVLLELLS 503
+ DV++FG++L E S
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 61 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 110
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 111 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 166
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 167 ESKQARANXFVGTAQYVSPELLTEKSACKSSD 198
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 126
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 127 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 182
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 183 ESKQARANAFVGTAQYVSPELLTEKSACKSSD 214
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 128
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 129 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSAXKSSD 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 85/217 (39%), Gaps = 63/217 (29%)
Query: 345 VYRATIDGKVLAVKKIK-EDVTEELRILQRIN-----HANLVKLMG---VSSDSQGNRFL 395
V+R + G+ +AVK D R + N H N++ + S S +L
Sbjct: 24 VWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83
Query: 396 VYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMH-----EHAQP 450
+ Y E GSL +L + L LR+ L +A+GL ++H +P
Sbjct: 84 ITHYHEMGSLYDYLQ-----------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSLA---APATN------------------------ 483
+I HRD+++ NI + + IA+ LA + +TN
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 484 ------DVMPKFDVFAFGVVLLELLSGKKATRTTENG 514
D + D++AFG+VL E+ A R NG
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEV-----ARRMVSNG 224
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 129
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 130 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 185
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 186 ESKQARANSFVGTAQYVSPELLTEKSACKSSD 217
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 51/187 (27%)
Query: 352 GKVLAVKKI-------KEDVTEELRILQRINHANLVKLMGVSSDSQGNR-FLVYEYAENG 403
GK +AVKK+ +E + E+ I++ +H N+V + SS G+ ++V E+ E G
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMY--SSYLVGDELWVVMEFLEGG 127
Query: 404 SL-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
+L D H + Q V L V L Y+H ++HRDI++++I
Sbjct: 128 ALTDIVTHTR------------MNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSI 172
Query: 463 QLDSRFKAKIANFSLAAPATNDVMPK------------------------FDVFAFGVVL 498
L S + K+++F A + +V PK D+++ G+++
Sbjct: 173 LLTSDGRIKLSDFGFCAQVSKEV-PKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMV 231
Query: 499 LELLSGK 505
+E++ G+
Sbjct: 232 IEMIDGE 238
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E ++ R++H VKL D + F + YA+NG L K++
Sbjct: 76 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-SYAKNGELLKYIRKIGS--------- 125
Query: 424 FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---AP 480
F R A ++ + L+Y+H I+HRD++ NI L+ +I +F A +P
Sbjct: 126 FDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 181
Query: 481 ATNDVMPKFDVFAFGVVLLELLSGKKATRTTE 512
+ V V ELL+ K A ++++
Sbjct: 182 ESKQARANSFVGTAQYVSPELLTEKSACKSSD 213
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 37/170 (21%)
Query: 359 KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXX 418
K KE+V E+ ++ +++HANL++L + +S+ + LV EY + G L +
Sbjct: 128 KDKEEVKNEISVMNQLDHANLIQLYD-AFESKNDIVLVMEYVDGGELFDRIIDESYNLTE 186
Query: 419 XXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR--FKAKIANFS 476
++F+ + G+++MH Q I+H D++ NI +R + KI +F
Sbjct: 187 LDTILFMK---------QICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFG 234
Query: 477 LAAP-------ATNDVMPKF---------------DVFAFGVVLLELLSG 504
LA N P+F D+++ GV+ LLSG
Sbjct: 235 LARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 31/152 (20%)
Query: 343 KSVYRATIDGKVLAVKKI-----KED----VTEELRILQRINHANLVKLMGVS------- 386
K+ +R T G+ +A+KK+ KE E++ILQ + H N+V L+ +
Sbjct: 36 KARHRKT--GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY 93
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
+ +G+ +LV+++ E+ ++ T S+ RV + NGL Y+H
Sbjct: 94 NRCKGSIYLVFDFCEHD----------LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ I+HRD++ N+ + K+A+F LA
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 340 SIGKSVYRATIDGKVLAVKKI-----KED----VTEELRILQRINHANLVKLMGVS---- 386
+ K+ +R T G+ +A+KK+ KE E++ILQ + H N+V L+ +
Sbjct: 32 EVFKARHRKT--GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKA 89
Query: 387 ---SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQY 443
+ +G+ +LV+++ E+ ++ T S+ RV + NGL Y
Sbjct: 90 SPYNRCKGSIYLVFDFCEHD----------LAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 444 MHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+H + I+HRD++ N+ + K+A+F LA
Sbjct: 140 IHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query: 341 IGKSVYRATIDGKVLAVKKI-----KED----VTEELRILQRINHANLVKLMGVS----- 386
+ K+ +R T G+ +A+KK+ KE E++ILQ + H N+V L+ +
Sbjct: 34 VFKARHRKT--GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS 91
Query: 387 --SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYM 444
+ +G+ +LV+++ E+ ++ T S+ RV + NGL Y+
Sbjct: 92 PYNRCKGSIYLVFDFCEHD----------LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 445 HEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
H + I+HRD++ N+ + K+A+F LA
Sbjct: 142 HRN---KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|4EBY|A Chain A, Crystal Structure Of The Ectodomain Of A Receptor Like
Kinase
pdb|4EBZ|A Chain A, Crystal Structure Of The Ectodomain Of A Receptor Like
Kinase
Length = 212
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 90 LLVPIICGCTGNQYFA-NITYQIKKGDSYYLVSITSFENLTNWHAVLEMNPGINPNLLQI 148
+LVP C C + N +Y +++ D+Y V+I+++ NLT ++ NP N + +
Sbjct: 61 VLVPFPCECQPGDFLGHNFSYSVRQEDTYERVAISNYANLTTMESLQARNPFPATN-IPL 119
Query: 149 GVKVTFPLFCKCPSKTNMED-GIENLITYVWQPGDDVSQVGAKLNASSAAIETENEYRNF 207
+ + C C ++ +D G+ +TY +P D +S + S+ ++ N NF
Sbjct: 120 SATLNVLVNCSCGDESVSKDFGL--FVTYPLRPEDSLSSIARSSGVSADILQRYNPGVNF 177
Query: 208 SEA 210
+
Sbjct: 178 NSG 180
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 83/217 (38%), Gaps = 63/217 (29%)
Query: 345 VYRATIDGKVLAVK----KIKEDVTEELRILQRI--NHANLVKLMG---VSSDSQGNRFL 395
V+R G+ +AVK + ++ E I + H N++ + S +S +L
Sbjct: 24 VWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWL 83
Query: 396 VYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMH-----EHAQP 450
+ Y E+GSL +L LR+A+ A GL ++H +P
Sbjct: 84 ITHYHEHGSLYDFLQRQTLEPHLA-----------LRLAVSAACGLAHLHVEIFGTQGKP 132
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSLA------------------------APATNDVM 486
+I HRD ++ N+ + S + IA+ LA AP D
Sbjct: 133 AIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQ 192
Query: 487 PKFDVF---------AFGVVLLELLSGKKATRTTENG 514
+ D F AFG+VL E+ A RT NG
Sbjct: 193 IRTDCFESYKWTDIWAFGLVLWEI-----ARRTIVNG 224
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 54/233 (23%)
Query: 312 GVSGYLGKPIVYEIEVIMESTMNLSEHYSIGK----SVY--RATIDGKVLAVKKIK---- 361
G +G L P V E+ + S+ IG +VY R + +V+A+KK+
Sbjct: 33 GRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK 92
Query: 362 ------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKW-LHPXXX 414
+D+ +E+R LQ++ H N ++ G + +LV EY + D +H
Sbjct: 93 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-REHTAWLVMEYCLGSASDLLEVHKKPL 151
Query: 415 XXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIAN 474
V GL Y+H H +++HRD++ NI L K+ +
Sbjct: 152 QEVEIAAVTH-----------GALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGD 197
Query: 475 F---SLAAPATNDVMP-------------------KFDVFAFGVVLLELLSGK 505
F S+ APA V K DV++ G+ +EL K
Sbjct: 198 FGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 35/171 (20%)
Query: 355 LAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXX 414
L + ++ + E+ I + H N++++ D + +L+ E+A G L K L
Sbjct: 52 LEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQ-KHG 109
Query: 415 XXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIAN 474
F+ ++A+ L Y HE ++HRDI+ N+ + + + KIA+
Sbjct: 110 RFDEQRSATFME---------ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIAD 157
Query: 475 F--SLAAPA--------TNDVMP-----------KFDVFAFGVVLLELLSG 504
F S+ AP+ T D +P K D++ GV+ E L G
Sbjct: 158 FGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 22/153 (14%)
Query: 340 SIGKSVYRATIDGKVLAVKKIK--------EDVTEELRILQRINHANLVKLMGVSSDSQG 391
S+ + VYR +A+K +K E++ E +I+ ++++ +V+L+GV
Sbjct: 25 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA- 83
Query: 392 NRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPS 451
LV E A G L K+L L V+ G++Y+ E +
Sbjct: 84 -LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH---------QVSMGMKYLEEK---N 130
Query: 452 IVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
VHRD+ N+ L +R AKI++F L+ D
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 35/171 (20%)
Query: 355 LAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXX 414
L + ++ + E+ I + H N++++ D + +L+ E+A G L K L
Sbjct: 52 LEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQ-KHG 109
Query: 415 XXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIAN 474
F+ ++A+ L Y HE ++HRDI+ N+ + + + KIA+
Sbjct: 110 RFDEQRSATFME---------ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIAD 157
Query: 475 F--SLAAPA--------TNDVMP-----------KFDVFAFGVVLLELLSG 504
F S+ AP+ T D +P K D++ GV+ E L G
Sbjct: 158 FGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 32/151 (21%)
Query: 347 RATIDGKVLAVKKIKED------VTEELRILQRINHA-------------NLVKLMGVSS 387
R +D + A+KKI+ + E+ +L +NH N VK M +
Sbjct: 26 RNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM-TAV 84
Query: 388 DSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEH 447
+ F+ EY ENG+L +H + R+ + L Y+H
Sbjct: 85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQR---------DEYWRLFRQILEALSYIHSQ 135
Query: 448 AQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I+HRD++ NI +D KI +F LA
Sbjct: 136 G---IIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 35/171 (20%)
Query: 355 LAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXX 414
L + ++ + E+ I + H N++++ D + +L+ E+A G L K L
Sbjct: 53 LEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQ-KHG 110
Query: 415 XXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIAN 474
F+ ++A+ L Y HE ++HRDI+ N+ + + + KIA+
Sbjct: 111 RFDEQRSATFME---------ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIAD 158
Query: 475 F--SLAAPA--------TNDVMP-----------KFDVFAFGVVLLELLSG 504
F S+ AP+ T D +P K D++ GV+ E L G
Sbjct: 159 FGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 304 LAQNKLLPGVSGYLGKPIVYEIEVIMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKI 360
L Q +P +S KP + I ++ L + G+ V+ AT + +AVK +
Sbjct: 161 LCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM 220
Query: 361 K------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXX 414
K E E +++ + H LVKL V + +++ E+ GSL +L
Sbjct: 221 KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEP--IYIITEFMAKGSLLDFLKSDEG 278
Query: 415 XXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIAN 474
+I + +A G+ ++ Q + +HRD+R NI + + KIA+
Sbjct: 279 SKQPLPKLIDFS--------AQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIAD 327
Query: 475 FSLA---------------------APAT---NDVMPKFDVFAFGVVLLELLS 503
F LA AP K DV++FG++L+E+++
Sbjct: 328 FGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 51/200 (25%)
Query: 344 SVYRA--TIDGKVLAVKKIKEDVTE--------ELRILQRINHANLVKLMGVSSDSQGNR 393
+VY+ G +A+K++K D E E+ +++ + H N+V+L V ++
Sbjct: 20 TVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH-TENKL 78
Query: 394 FLVYEYAENGSLDKWLHPXXXXXX----XXXXVIFLTWSQRLRVALDVANGLQYMHEHAQ 449
LV+E+ +N L K++ V + W + GL + HE+
Sbjct: 79 TLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQ--------LLQGLAFCHEN-- 127
Query: 450 PSIVHRDIRTNNIQLDSRFKAKIANFSLA--------------------AP----ATNDV 485
I+HRD++ N+ ++ R + K+ +F LA AP +
Sbjct: 128 -KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 486 MPKFDVFAFGVVLLELLSGK 505
D+++ G +L E+++GK
Sbjct: 187 STSIDIWSCGCILAEMITGK 206
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 40/190 (21%)
Query: 353 KVLAVKKI-KEDVTEELR----ILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDK 407
KVL +I KE V +LR I ++H N+++L D + +L+ EYA G L K
Sbjct: 54 KVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRR-RIYLILEYAPRGELYK 112
Query: 408 WLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
L I ++A+ L Y H ++HRDI+ N+ L +
Sbjct: 113 ELQKSCTFDEQRTATIME----------ELADALMYCH---GKKVIHRDIKPENLLLGLK 159
Query: 468 FKAKIANF--SLAAPA--------TNDVMP-----------KFDVFAFGVVLLELLSGKK 506
+ KIA+F S+ AP+ T D +P K D++ GV+ ELL G
Sbjct: 160 GELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNP 219
Query: 507 ATRTTENGKT 516
+ + +T
Sbjct: 220 PFESASHNET 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 338 HYSIGKSVYRATIDGKVLAVKKIKEDVTEELRI--------LQRINHANLVKLMGVSSDS 389
+ + K V + + +V A+K + E + RI ++ N ++V+L+GV S
Sbjct: 42 YEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 390 QGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQ 449
Q ++ E G L +L + + S+ +++A ++A+G+ Y++ +
Sbjct: 101 QPT-LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-- 157
Query: 450 PSIVHRDIRTNNIQLDSRFKAKIANFSL 477
VHRD+ N + F KI +F +
Sbjct: 158 -KFVHRDLAARNCMVAEDFTVKIGDFGM 184
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXX 421
ED E+ IL +H N+VKL+ + N +++ E+ G++D +
Sbjct: 79 EDYMVEIDILASCDHPNIVKLLDAFY-YENNLWILIEFCAGGAVDAVMLELERP------ 131
Query: 422 VIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPA 481
LT SQ V + L Y+H++ I+HRD++ NI K+A+F ++A
Sbjct: 132 ---LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 185
Query: 482 TNDV 485
T +
Sbjct: 186 TRXI 189
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 38/163 (23%)
Query: 366 EELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFL 425
+E+ +L++++H N++KL D + N +LV E G L + VI
Sbjct: 70 DEVAVLKQLDHPNIMKLYEFFEDKR-NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 128
Query: 426 TWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLAA--- 479
V +G Y+H+H +IVHRD++ N+ L+S+ + KI +F L+A
Sbjct: 129 Q----------VLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE 175
Query: 480 ---------PATNDVMP---------KFDVFAFGVVLLELLSG 504
+ P K DV++ GV+L LL G
Sbjct: 176 VGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXX 421
ED E+ IL +H N+VKL+ + N +++ E+ G++D +
Sbjct: 79 EDYMVEIDILASCDHPNIVKLLDAFY-YENNLWILIEFCAGGAVDAVMLELERP------ 131
Query: 422 VIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPA 481
LT SQ V + L Y+H++ I+HRD++ NI K+A+F ++A
Sbjct: 132 ---LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 185
Query: 482 TNDV 485
T +
Sbjct: 186 TRTI 189
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 31/164 (18%)
Query: 329 MESTMNLSEHYSIGKSVYRATIDGK------VLAVKKIKEDVTE--------ELRILQRI 374
ME+ + L + +G+ Y GK ++A+K+I+ + E E+ +L+ +
Sbjct: 1 METYIKLDK---LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL 57
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
HAN+V L + ++ + LV+EY + L ++L +FL Q LR
Sbjct: 58 KHANIVTLHDIIH-TEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLF--QLLR-- 111
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
GL Y H + ++HRD++ N+ ++ R + K+A+F LA
Sbjct: 112 -----GLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLA 147
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXX 421
ED E+ IL +H N+VKL+ + N +++ E+ G++D +
Sbjct: 79 EDYMVEIDILASCDHPNIVKLLDAFY-YENNLWILIEFCAGGAVDAVMLELERP------ 131
Query: 422 VIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPA 481
LT SQ V + L Y+H++ I+HRD++ NI K+A+F ++A
Sbjct: 132 ---LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 185
Query: 482 TNDV 485
T +
Sbjct: 186 TRXI 189
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 25/150 (16%)
Query: 336 SEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR-- 393
S H+ KSV R + L + ++E LR L+ H N+V+LM V + S+ +R
Sbjct: 28 SGHFVALKSV-RVPNGEEGLPISTVRE--VALLRRLEAFEHPNVVRLMDVCATSRTDREI 84
Query: 394 --FLVYEYAENG---SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHA 448
LV+E+ + LDK P + Q LR GL ++H +
Sbjct: 85 KVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM-----RQFLR-------GLDFLHANC 132
Query: 449 QPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
IVHRD++ NI + S K+A+F LA
Sbjct: 133 ---IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 25/150 (16%)
Query: 336 SEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR-- 393
S H+ KSV R + L + ++E LR L+ H N+V+LM V + S+ +R
Sbjct: 28 SGHFVALKSV-RVPNGEEGLPISTVRE--VALLRRLEAFEHPNVVRLMDVCATSRTDREI 84
Query: 394 --FLVYEYAENG---SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHA 448
LV+E+ + LDK P + Q LR GL ++H +
Sbjct: 85 KVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM-----RQFLR-------GLDFLHANC 132
Query: 449 QPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
IVHRD++ NI + S K+A+F LA
Sbjct: 133 ---IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 25/150 (16%)
Query: 336 SEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR-- 393
S H+ KSV R + L + ++E LR L+ H N+V+LM V + S+ +R
Sbjct: 28 SGHFVALKSV-RVPNGEEGLPISTVRE--VALLRRLEAFEHPNVVRLMDVCATSRTDREI 84
Query: 394 --FLVYEYAENG---SLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHA 448
LV+E+ + LDK P + Q LR GL ++H +
Sbjct: 85 KVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM-----RQFLR-------GLDFLHANC 132
Query: 449 QPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
IVHRD++ NI + S K+A+F LA
Sbjct: 133 ---IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 338 HYSIGKSVYRATIDGKVLAVKKIKEDVTEELRI--------LQRINHANLVKLMGVSSDS 389
+ + K V + + +V A+K + E + RI ++ N ++V+L+GV S
Sbjct: 42 YEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 390 QGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQ 449
Q ++ E G L +L + + S+ +++A ++A+G+ Y++ +
Sbjct: 101 QPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-- 157
Query: 450 PSIVHRDIRTNNIQLDSRFKAKIANFSL 477
VHRD+ N + F KI +F +
Sbjct: 158 -KFVHRDLAARNCMVAEDFTVKIGDFGM 184
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E +++ N ++V+L+GV S Q ++ E G L +L + +
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSL 477
S+ +++A ++A+G+ Y++ + VHRD+ N + F KI +F +
Sbjct: 127 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 174
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 338 HYSIGKSVYRATIDGKVLAVKKIKEDVTEELRI--------LQRINHANLVKLMGVSSDS 389
+ + K V + + +V A+K + E + RI ++ N ++V+L+GV S
Sbjct: 27 YEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 85
Query: 390 QGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQ 449
Q ++ E G L +L + + S+ +++A ++A+G+ Y++ +
Sbjct: 86 QPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-- 142
Query: 450 PSIVHRDIRTNNIQLDSRFKAKIANFSL 477
VHRD+ N + F KI +F +
Sbjct: 143 -KFVHRDLAARNCMVAEDFTVKIGDFGM 169
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 361 KEDVTEELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
KE + EL+I+ + H N+V L+G + G ++ EY G L +L
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHG-GPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 420 XXVIFL--TWSQR--LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF 475
T S R L + VA G+ ++ A + +HRD+ N+ L + AKI +F
Sbjct: 152 PAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 208
Query: 476 SLAAPATND 484
LA ND
Sbjct: 209 GLARDIMND 217
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 340 SIGKSVYRATIDGKVLAVKKI-----KED----VTEELRILQRINHANLVKLMGV--SSD 388
+ K+ +R T G+ +A+KK+ KE E++ILQ + H N+V L+ + +
Sbjct: 33 EVFKARHRKT--GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKA 90
Query: 389 SQGNR-----FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQY 443
S NR +LV+++ E+ ++ T S+ RV + NGL Y
Sbjct: 91 SPYNRCKASIYLVFDFCEHD----------LAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 444 MHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+H + I+HRD++ N+ + K+A+F LA
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E +++ N ++V+L+GV S Q ++ E G L +L + +
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSL 477
S+ +++A ++A+G+ Y++ + VHRD+ N + F KI +F +
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 178
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 368 LRILQRINHANLVKLMGVSSDSQGNR----FLVYEYAENG---SLDKWLHPXXXXXXXXX 420
LR L+ H N+V+LM V + S+ +R LV+E+ + LDK P
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 124
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ Q LR GL ++H + IVHRD++ NI + S K+A+F LA
Sbjct: 125 LM-----RQFLR-------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 167
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG-NRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFL 425
E +L+++NH N+VKL + ++ ++ L+ E+ GSL L L
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-------L 109
Query: 426 TWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQL----DSRFKAKIANFSLAAPA 481
S+ L V DV G+ ++ E+ IVHR+I+ NI D + K+ +F A
Sbjct: 110 PESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
Query: 482 TND 484
+D
Sbjct: 167 EDD 169
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 267 HLQRKRVRILNRNGSSLESADLI----PMKENSKSDRFEPKLAQNKLLPGVSGYLGKPIV 322
H QR R+ LN +G + E A + P + FE + + L +L + +
Sbjct: 279 HPQR-RIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNL 337
Query: 323 YEIEVIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIK--------EDVTEELRILQRI 374
+I + + S+ + VYR +A+K +K E++ E +I+ ++
Sbjct: 338 ----LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 393
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
++ +V+L+GV LV E A G L K+L L
Sbjct: 394 DNPYIVRLIGVCQAEA--LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH-------- 443
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
V+ G++Y+ E + VHR++ N+ L +R AKI++F L+
Sbjct: 444 -QVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLS 483
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E +++ N ++V+L+GV S Q ++ E G L +L + +
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSL 477
S+ +++A ++A+G+ Y++ + VHRD+ N + F KI +F +
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 177
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E +++ N ++V+L+GV S Q ++ E G L +L + +
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 127
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSL 477
S+ +++A ++A+G+ Y++ + VHRD+ N + F KI +F +
Sbjct: 128 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 175
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E +++ N ++V+L+GV S Q ++ E G L +L + +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSL 477
S+ +++A ++A+G+ Y++ + VHRD+ N + F KI +F +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 171
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG-NRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFL 425
E +L+++NH N+VKL + ++ ++ L+ E+ GSL L L
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-------L 109
Query: 426 TWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQL----DSRFKAKIANFSLAAPA 481
S+ L V DV G+ ++ E+ IVHR+I+ NI D + K+ +F A
Sbjct: 110 PESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
Query: 482 TND 484
+D
Sbjct: 167 EDD 169
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E +++ N ++V+L+GV S Q ++ E G L +L + +
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSL 477
S+ +++A ++A+G+ Y++ + VHRD+ N + F KI +F +
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 177
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 81/203 (39%), Gaps = 51/203 (25%)
Query: 338 HYSIGKSVY--RATIDGKVLAVKKIK----------EDVTEELRILQRINHANLVKLMGV 385
H S G +VY R + +V+A+KK+ +D+ +E+R LQ++ H N ++ G
Sbjct: 25 HGSFG-AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC 83
Query: 386 SSDSQGNRFLVYEYAENGSLDKW-LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYM 444
+ +LV EY + D +H V GL Y+
Sbjct: 84 YL-REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH-----------GALQGLAYL 131
Query: 445 HEHAQPSIVHRDIRTNNIQLDSRFKAKIANF---SLAAPATNDVMP-------------- 487
H H +++HRD++ NI L K+ +F S+ APA V
Sbjct: 132 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDE 188
Query: 488 -----KFDVFAFGVVLLELLSGK 505
K DV++ G+ +EL K
Sbjct: 189 GQYDGKVDVWSLGITCIELAERK 211
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E +++ N ++V+L+GV S Q ++ E G L +L + +
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSL 477
S+ +++A ++A+G+ Y++ + VHRD+ N + F KI +F +
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 178
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 361 KEDVTEELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
KE + EL+I+ + H N+V L+G + G ++ EY G L +L
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHG-GPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 420 XXVIFL--TWSQR--LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF 475
T S R L + VA G+ ++ A + +HRD+ N+ L + AKI +F
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 208
Query: 476 SLAAPATND 484
LA ND
Sbjct: 209 GLARDIMND 217
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E +++ N ++V+L+GV S Q ++ E G L +L + +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSL 477
S+ +++A ++A+G+ Y++ + VHRD+ N + F KI +F +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGM 171
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 39/166 (23%)
Query: 363 DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
+ +E I+ ++H +LV+L+GV LV + +G L +++H
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHKDNIGSQ--- 140
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
+ L W + +A G+ Y+ E +VHRD+ N+ + S KI +F LA
Sbjct: 141 LLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE 191
Query: 483 ND---------VMP------------KF----DVFAFGVVLLELLS 503
D MP KF DV+++GV + EL++
Sbjct: 192 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 366 EELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFL 425
+E+ +L++++H N++KL D + N +LV E G L + VI
Sbjct: 53 DEVAVLKQLDHPNIMKLYEFFEDKR-NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 426 TWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFK---AKIANFSLAA 479
V +G Y+H+H +IVHRD++ N+ L+S+ + KI +F L+A
Sbjct: 112 Q----------VLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSA 155
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 51/196 (26%)
Query: 355 LAVKKIKE--DVTE------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENGSL 405
+AVK +KE D +E EL+++ ++ +H N+V L+G + S G +L++EY G L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS-GPIYLIFEYCCYGDL 136
Query: 406 DKWL-------------HPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSI 452
+L + + LT+ L A VA G++++ S
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSC 193
Query: 453 VHRDIRTNNIQLDSRFKAKIANFSLAAPATNDV---------MP---------------- 487
VHRD+ N+ + KI +F LA +D +P
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 488 KFDVFAFGVVLLELLS 503
K DV+++G++L E+ S
Sbjct: 254 KSDVWSYGILLWEIFS 269
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 60/222 (27%)
Query: 328 IMESTMNLSEHYS----IGKSVY------RATIDGKVLAVKKI----------KEDVTEE 367
+ ST S+ Y +GK + + I G+ AVK I KE + E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 368 LRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXXVIFLT 426
+++L++++H N+ KL D +G +LV E G L D+ + +
Sbjct: 77 VQLLKQLDHPNIXKLYEFFED-KGYFYLVGEVYTGGELFDEIISRKR-----------FS 124
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKA---KIANFSL-----A 478
R+ V +G+ Y H++ IVHRD++ N+ L+S+ K +I +F L A
Sbjct: 125 EVDAARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181
Query: 479 APATND-------VMP---------KFDVFAFGVVLLELLSG 504
+ D + P K DV++ GV+L LLSG
Sbjct: 182 SKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
E +++ N ++V+L+GV S Q ++ E G L +L + +
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 158
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSL 477
S+ +++A ++A+G+ Y++ + VHRD+ N + F KI +F +
Sbjct: 159 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 206
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 35/175 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWL-----HPXXX 414
++E+ E + R+ H N+V L+GV + Q +++ Y +G L ++L H
Sbjct: 55 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS-MIFSYCSHGDLHEFLVMRSPHSDVG 113
Query: 415 XXXXXXXVI-FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
V L + + +A G++Y+ H +VH+D+ T N+ + + KI+
Sbjct: 114 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKIS 170
Query: 474 NFSLAAPA---------TNDVMP------------KF----DVFAFGVVLLELLS 503
+ L N ++P KF D++++GVVL E+ S
Sbjct: 171 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 49/186 (26%)
Query: 352 GKVLAVKKI-------KEDVTEELRILQRINHANLVKLMGVSSDSQGNR-FLVYEYAENG 403
GK++AVKK+ +E + E+ I++ H N+V++ +S G+ ++V E+ E G
Sbjct: 49 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY--NSYLVGDELWVVMEFLEGG 106
Query: 404 SL-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
+L D H + Q V L V L +H ++HRDI++++I
Sbjct: 107 ALTDIVTHTR------------MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSI 151
Query: 463 QLDSRFKAKIANFSLAAPATNDVM-----------------------PKFDVFAFGVVLL 499
L + K+++F A + +V P+ D+++ G++++
Sbjct: 152 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 211
Query: 500 ELLSGK 505
E++ G+
Sbjct: 212 EMVDGE 217
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 35/175 (20%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWL-----HPXXX 414
++E+ E + R+ H N+V L+GV + Q +++ Y +G L ++L H
Sbjct: 72 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS-MIFSYCSHGDLHEFLVMRSPHSDVG 130
Query: 415 XXXXXXXVI-FLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
V L + + +A G++Y+ H +VH+D+ T N+ + + KI+
Sbjct: 131 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKIS 187
Query: 474 NFSLAAPA---------TNDVMP------------KF----DVFAFGVVLLELLS 503
+ L N ++P KF D++++GVVL E+ S
Sbjct: 188 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 27/138 (19%)
Query: 353 KVLAVKKIKEDVTE--------ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGS 404
K++A+K I ++ E E+ +L +I H N+V L + +S G+ +L+ + G
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI-YESGGHLYLIMQLVSGGE 102
Query: 405 L-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI- 462
L D+ + F T R+ V + ++Y+H+ IVHRD++ N+
Sbjct: 103 LFDRIVEKG-----------FYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLL 148
Query: 463 --QLDSRFKAKIANFSLA 478
LD K I++F L+
Sbjct: 149 YYSLDEDSKIMISDFGLS 166
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 49/186 (26%)
Query: 352 GKVLAVKKI-------KEDVTEELRILQRINHANLVKLMGVSSDSQGNR-FLVYEYAENG 403
GK++AVKK+ +E + E+ I++ H N+V++ +S G+ ++V E+ E G
Sbjct: 54 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY--NSYLVGDELWVVMEFLEGG 111
Query: 404 SL-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
+L D H + Q V L V L +H ++HRDI++++I
Sbjct: 112 ALTDIVTH------------TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSI 156
Query: 463 QLDSRFKAKIANFSLAAPATNDVM-----------------------PKFDVFAFGVVLL 499
L + K+++F A + +V P+ D+++ G++++
Sbjct: 157 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 216
Query: 500 ELLSGK 505
E++ G+
Sbjct: 217 EMVDGE 222
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 49/186 (26%)
Query: 352 GKVLAVKKI-------KEDVTEELRILQRINHANLVKLMGVSSDSQGNR-FLVYEYAENG 403
GK++AVKK+ +E + E+ I++ H N+V++ +S G+ ++V E+ E G
Sbjct: 45 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY--NSYLVGDELWVVMEFLEGG 102
Query: 404 SL-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
+L D H + Q V L V L +H ++HRDI++++I
Sbjct: 103 ALTDIVTHTR------------MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSI 147
Query: 463 QLDSRFKAKIANFSLAAPATNDVM-----------------------PKFDVFAFGVVLL 499
L + K+++F A + +V P+ D+++ G++++
Sbjct: 148 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 207
Query: 500 ELLSGK 505
E++ G+
Sbjct: 208 EMVDGE 213
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 39/166 (23%)
Query: 363 DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
+ +E I+ ++H +LV+L+GV LV + +G L +++H
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHKDNIGSQ--- 117
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
+ L W + +A G+ Y+ E +VHRD+ N+ + S KI +F LA
Sbjct: 118 LLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE 168
Query: 483 ND---------VMP------------KF----DVFAFGVVLLELLS 503
D MP KF DV+++GV + EL++
Sbjct: 169 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 49/186 (26%)
Query: 352 GKVLAVKKI-------KEDVTEELRILQRINHANLVKLMGVSSDSQGNR-FLVYEYAENG 403
GK++AVKK+ +E + E+ I++ H N+V++ +S G+ ++V E+ E G
Sbjct: 56 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY--NSYLVGDELWVVMEFLEGG 113
Query: 404 SL-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
+L D H + Q V L V L +H ++HRDI++++I
Sbjct: 114 ALTDIVTH------------TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSI 158
Query: 463 QLDSRFKAKIANFSLAAPATNDVM-----------------------PKFDVFAFGVVLL 499
L + K+++F A + +V P+ D+++ G++++
Sbjct: 159 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 218
Query: 500 ELLSGK 505
E++ G+
Sbjct: 219 EMVDGE 224
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 49/186 (26%)
Query: 352 GKVLAVKKI-------KEDVTEELRILQRINHANLVKLMGVSSDSQGNR-FLVYEYAENG 403
GK++AVKK+ +E + E+ I++ H N+V++ +S G+ ++V E+ E G
Sbjct: 176 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY--NSYLVGDELWVVMEFLEGG 233
Query: 404 SL-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
+L D H + Q V L V L +H ++HRDI++++I
Sbjct: 234 ALTDIVTH------------TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSI 278
Query: 463 QLDSRFKAKIANFSLAAPATNDVM-----------------------PKFDVFAFGVVLL 499
L + K+++F A + +V P+ D+++ G++++
Sbjct: 279 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 338
Query: 500 ELLSGK 505
E++ G+
Sbjct: 339 EMVDGE 344
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 49/186 (26%)
Query: 352 GKVLAVKKI-------KEDVTEELRILQRINHANLVKLMGVSSDSQGNR-FLVYEYAENG 403
GK++AVKK+ +E + E+ I++ H N+V++ +S G+ ++V E+ E G
Sbjct: 99 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY--NSYLVGDELWVVMEFLEGG 156
Query: 404 SL-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
+L D H + Q V L V L +H ++HRDI++++I
Sbjct: 157 ALTDIVTH------------TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSI 201
Query: 463 QLDSRFKAKIANFSLAAPATNDVM-----------------------PKFDVFAFGVVLL 499
L + K+++F A + +V P+ D+++ G++++
Sbjct: 202 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 261
Query: 500 ELLSGK 505
E++ G+
Sbjct: 262 EMVDGE 267
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 28/154 (18%)
Query: 341 IGKSVYRATIDGKVLAVKKIK---EDVTEELRILQRI-------NHANLVKLMGV-SSDS 389
+ KS+ R T G+V+AVKKI ++ T+ R + I H N+V L+ V +D+
Sbjct: 25 VWKSIDRRT--GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN 82
Query: 390 QGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQ 449
+ +LV++Y E LH L + V + ++Y+H
Sbjct: 83 DRDVYLVFDYMETD-----LHAVIRAN-------ILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 450 PSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATN 483
++HRD++ +NI L++ K+A+F L+ N
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 77/195 (39%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKLMGVSSDSQGNRFLVY-- 397
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L S + +VY
Sbjct: 36 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLN 95
Query: 398 ---EYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+Y H + L Q R L Y+H I H
Sbjct: 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 145
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 205
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 206 VWSAGCVLAELLLGQ 220
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 80/214 (37%), Gaps = 53/214 (24%)
Query: 332 TMNLSEHYSI-GKSVYRATI------DGKVLAVKKIKEDVT----------EELRILQRI 374
TMN E+ + GK + I G+ A+K +K++V E R+LQ
Sbjct: 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H L L S + V EYA G L + H F
Sbjct: 206 RHPFLTALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFY--------G 254
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
++ + L Y+H ++ ++V+RD++ N+ LD KI +F L
Sbjct: 255 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 312
Query: 479 ----APAT---NDVMPKFDVFAFGVVLLELLSGK 505
AP ND D + GVV+ E++ G+
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 27/138 (19%)
Query: 353 KVLAVKKIKEDVTE--------ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGS 404
K++A+K I ++ E E+ +L +I H N+V L + +S G+ +L+ + G
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI-YESGGHLYLIMQLVSGGE 102
Query: 405 L-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI- 462
L D+ + F T R+ V + ++Y+H+ IVHRD++ N+
Sbjct: 103 LFDRIVEKG-----------FYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLL 148
Query: 463 --QLDSRFKAKIANFSLA 478
LD K I++F L+
Sbjct: 149 YYSLDEDSKIMISDFGLS 166
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 80/214 (37%), Gaps = 53/214 (24%)
Query: 332 TMNLSEHYSI-GKSVYRATI------DGKVLAVKKIKEDVT----------EELRILQRI 374
TMN E+ + GK + I G+ A+K +K++V E R+LQ
Sbjct: 149 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H L L S + V EYA G L + H F
Sbjct: 209 RHPFLTALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFY--------G 257
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
++ + L Y+H ++ ++V+RD++ N+ LD KI +F L
Sbjct: 258 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 315
Query: 479 ----APAT---NDVMPKFDVFAFGVVLLELLSGK 505
AP ND D + GVV+ E++ G+
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 95/226 (42%), Gaps = 43/226 (19%)
Query: 317 LGKPIVYEIEVIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINH 376
LG+ ++ ++ + T S H K + +AT+ + K++ D IL +NH
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD------ILADVNH 89
Query: 377 ANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
+VKL + ++G +L+ ++ G L L V+F + +A +
Sbjct: 90 PFVVKLH-YAFQTEGKLYLILDFLRGGDLFTRL---------SKEVMFTEEDVKFYLA-E 138
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKF------- 489
+A GL ++H I++RD++ NI LD K+ +F L+ A + +
Sbjct: 139 LALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVE 195
Query: 490 ----------------DVFAFGVVLLELLSGKKATRTTENGKTAVL 519
D +++GV++ E+L+G + + +T L
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL 241
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 38/175 (21%)
Query: 354 VLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXX 413
++A ++ VTE R+LQ H L L + + V EYA G L + H
Sbjct: 46 IIAKDEVAHTVTES-RVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGEL--FFH--- 98
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+F R A ++ + L+Y+H +V+RDI+ N+ LD KI
Sbjct: 99 ----LSRERVFTEERARFYGA-EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKIT 150
Query: 474 NFSLA--------------------APAT---NDVMPKFDVFAFGVVLLELLSGK 505
+F L AP ND D + GVV+ E++ G+
Sbjct: 151 DFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 38/175 (21%)
Query: 354 VLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXX 413
++A ++ VTE R+LQ H L L + + V EYA G L + H
Sbjct: 43 IIAKDEVAHTVTES-RVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGEL--FFH--- 95
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+F R A ++ + L+Y+H +V+RDI+ N+ LD KI
Sbjct: 96 ----LSRERVFTEERARFYGA-EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKIT 147
Query: 474 NFSLA--------------------APAT---NDVMPKFDVFAFGVVLLELLSGK 505
+F L AP ND D + GVV+ E++ G+
Sbjct: 148 DFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 115 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 174
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 175 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 224
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 225 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 284
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 285 VWSAGCVLAELLLGQ 299
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 50/204 (24%)
Query: 341 IGKSVYRATIDGKVL------AVKKIKE-------DVTEELRILQRINHANLVKLMGVSS 387
+GK Y G+ L A+K+I E + EE+ + + + H N+V+ +G S
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 388 DSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEH 447
++ G + E GSL L I Q + GL+Y+H++
Sbjct: 90 EN-GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-------ILEGLKYLHDN 141
Query: 448 AQPSIVHRDIRTNNIQLDSRFKA-KIANFSLA--------------------APATNDVM 486
IVHRDI+ +N+ +++ KI++F + AP D
Sbjct: 142 ---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198
Query: 487 PK-----FDVFAFGVVLLELLSGK 505
P+ D+++ G ++E+ +GK
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGK 222
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 38/175 (21%)
Query: 354 VLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXX 413
++A ++ VTE R+LQ H L L + + V EYA G L + H
Sbjct: 43 IIAKDEVAHTVTES-RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--- 95
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+F R A ++ + L+Y+H +V+RDI+ N+ LD KI
Sbjct: 96 ----LSRERVFTEERARFYGA-EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKIT 147
Query: 474 NFSLA--------------------APAT---NDVMPKFDVFAFGVVLLELLSGK 505
+F L AP ND D + GVV+ E++ G+
Sbjct: 148 DFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 27/138 (19%)
Query: 353 KVLAVKKIKEDVTE--------ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGS 404
K++A+K I ++ E E+ +L +I H N+V L + +S G+ +L+ + G
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI-YESGGHLYLIMQLVSGGE 102
Query: 405 L-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI- 462
L D+ + F T R+ V + ++Y+H+ IVHRD++ N+
Sbjct: 103 LFDRIVEKG-----------FYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLL 148
Query: 463 --QLDSRFKAKIANFSLA 478
LD K I++F L+
Sbjct: 149 YYSLDEDSKIMISDFGLS 166
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 41 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 100
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 101 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 150
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 151 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 210
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 211 VWSAGCVLAELLLGQ 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 64 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 123
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 124 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 173
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 174 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 233
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 234 VWSAGCVLAELLLGQ 248
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 74 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 133
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 134 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 183
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 184 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 243
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 244 VWSAGCVLAELLLGQ 258
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 70 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 130 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 179
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 180 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 239
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 240 VWSAGCVLAELLLGQ 254
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 65/234 (27%)
Query: 319 KPIVYEIEV------IMESTMNLSEHYSIGKSVYRA------TIDGKVLAVKKIK----- 361
+P Y E+ + E NLS +G Y + T G +AVKK+
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 61
Query: 362 ----EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXX 413
+ ELR+L+ + H N++ L+ V + ++ N + + L+ +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI
Sbjct: 122 LTDDHVQFLIY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 474 NFSLAAPATNDVMPKF----------------------DVFAFGVVLLELLSGK 505
+F LA T+D M F D+++ G ++ ELL+G+
Sbjct: 168 DFGLAR-HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 70 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 130 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 179
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 180 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 239
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 240 VWSAGCVLAELLLGQ 254
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 38/175 (21%)
Query: 354 VLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXX 413
++A ++ VTE R+LQ H L L + + V EYA G L + H
Sbjct: 48 IIAKDEVAHTVTES-RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--- 100
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+F R A ++ + L+Y+H +V+RDI+ N+ LD KI
Sbjct: 101 ----LSRERVFTEERARFYGA-EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKIT 152
Query: 474 NFSLA--------------------APAT---NDVMPKFDVFAFGVVLLELLSGK 505
+F L AP ND D + GVV+ E++ G+
Sbjct: 153 DFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 72 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 131
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 132 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 181
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 182 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 241
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 242 VWSAGCVLAELLLGQ 256
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 38/175 (21%)
Query: 354 VLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXX 413
++A ++ VTE R+LQ H L L + + V EYA G L + H
Sbjct: 43 IIAKDEVAHTVTES-RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--- 95
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+F R A ++ + L+Y+H +V+RDI+ N+ LD KI
Sbjct: 96 ----LSRERVFTEERARFYGA-EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKIT 147
Query: 474 NFSLA--------------------APAT---NDVMPKFDVFAFGVVLLELLSGK 505
+F L AP ND D + GVV+ E++ G+
Sbjct: 148 DFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 38/175 (21%)
Query: 354 VLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXX 413
++A ++ VTE R+LQ H L L + + V EYA G L + H
Sbjct: 43 IIAKDEVAHTVTES-RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--- 95
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+F R A ++ + L+Y+H +V+RDI+ N+ LD KI
Sbjct: 96 ----LSRERVFTEERARFYGA-EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKIT 147
Query: 474 NFSLA--------------------APAT---NDVMPKFDVFAFGVVLLELLSGK 505
+F L AP ND D + GVV+ E++ G+
Sbjct: 148 DFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 65/234 (27%)
Query: 319 KPIVYEIEV------IMESTMNLSEHYSIGKSVYRA------TIDGKVLAVKKIK----- 361
+P Y E+ + E NLS +G Y + T G +AVKK+
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 61
Query: 362 ----EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXX 413
+ ELR+L+ + H N++ L+ V + ++ N + + L+ +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI
Sbjct: 122 LTDDHVQFLIY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 474 NFSLAAPATNDVMPKF----------------------DVFAFGVVLLELLSGK 505
+F LA T+D M F D+++ G ++ ELL+G+
Sbjct: 168 DFGLAR-HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 26/151 (17%)
Query: 347 RATIDGKVLAVKKIKED-------VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
+ + GK+ A+K IK+ + E+ +L++I H N+V L + +S + +LV +
Sbjct: 29 KQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI-YESTTHYYLVMQL 87
Query: 400 AENGSL-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIR 458
G L D+ L VI V + ++Y+HE+ IVHRD++
Sbjct: 88 VSGGELFDRILERGVYTEKDASLVI-----------QQVLSAVKYLHENG---IVHRDLK 133
Query: 459 TNNIQL---DSRFKAKIANFSLAAPATNDVM 486
N+ + K I +F L+ N +M
Sbjct: 134 PENLLYLTPEENSKIMITDFGLSKMEQNGIM 164
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 53/214 (24%)
Query: 332 TMNLSEHYSI-GKSVYRATI------DGKVLAVKKIKEDVT----------EELRILQRI 374
TMN E+ + GK + I G+ A+K +K++V E R+LQ
Sbjct: 6 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 65
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H L L S + V EYA G L + H +F R A
Sbjct: 66 RHPFLTALK-YSFQTHDRLCFVMEYANGGEL--FFH-------LSRERVFSEDRARFYGA 115
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
++ + L Y+H ++ ++V+RD++ N+ LD KI +F L
Sbjct: 116 -EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGT 172
Query: 479 ----APAT---NDVMPKFDVFAFGVVLLELLSGK 505
AP ND D + GVV+ E++ G+
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 53/214 (24%)
Query: 332 TMNLSEHYSI-GKSVYRATI------DGKVLAVKKIKEDVT----------EELRILQRI 374
TMN E+ + GK + I G+ A+K +K++V E R+LQ
Sbjct: 8 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 67
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H L L S + V EYA G L + H +F R A
Sbjct: 68 RHPFLTALK-YSFQTHDRLCFVMEYANGGEL--FFH-------LSRERVFSEDRARFYGA 117
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
++ + L Y+H ++ ++V+RD++ N+ LD KI +F L
Sbjct: 118 -EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGT 174
Query: 479 ----APAT---NDVMPKFDVFAFGVVLLELLSGK 505
AP ND D + GVV+ E++ G+
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 53/214 (24%)
Query: 332 TMNLSEHYSI-GKSVYRATI------DGKVLAVKKIKEDVT----------EELRILQRI 374
TMN E+ + GK + I G+ A+K +K++V E R+LQ
Sbjct: 7 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 375 NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVA 434
H L L S + V EYA G L + H +F R A
Sbjct: 67 RHPFLTALK-YSFQTHDRLCFVMEYANGGEL--FFH-------LSRERVFSEDRARFYGA 116
Query: 435 LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---------------- 478
++ + L Y+H ++ ++V+RD++ N+ LD KI +F L
Sbjct: 117 -EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGT 173
Query: 479 ----APAT---NDVMPKFDVFAFGVVLLELLSGK 505
AP ND D + GVV+ E++ G+
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 50/204 (24%)
Query: 341 IGKSVYRATIDGKVL------AVKKIKE-------DVTEELRILQRINHANLVKLMGVSS 387
+GK Y G+ L A+K+I E + EE+ + + + H N+V+ +G S
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 388 DSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEH 447
++ G + E GSL L I Q + GL+Y+H++
Sbjct: 76 EN-GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-------ILEGLKYLHDN 127
Query: 448 AQPSIVHRDIRTNNIQLDSRFKA-KIANFSLA--------------------APATNDVM 486
IVHRDI+ +N+ +++ KI++F + AP D
Sbjct: 128 ---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 184
Query: 487 PK-----FDVFAFGVVLLELLSGK 505
P+ D+++ G ++E+ +GK
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 65/234 (27%)
Query: 319 KPIVYEIEV------IMESTMNLSEHYSIGKSVYRA------TIDGKVLAVKKIK----- 361
+P Y E+ + E NLS +G Y + T G +AVKK+
Sbjct: 1 RPTFYRQELNKTIWEVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 57
Query: 362 ----EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXX 413
+ ELR+L+ + H N++ L+ V + ++ N + + L+ +
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 117
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI
Sbjct: 118 LTDDHVQFLIY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 163
Query: 474 NFSLAAPATNDVMPKF----------------------DVFAFGVVLLELLSGK 505
+F LA T+D M F D+++ G ++ ELL+G+
Sbjct: 164 DFGLAR-HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 48 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 107
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 108 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 157
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 158 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 217
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 218 VWSAGCVLAELLLGQ 232
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 34/167 (20%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXX 421
E + E+ +L+ ++H N++K+ V D N ++V E E G L + +
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYH-NMYIVMETCEGGELLERIVSAQARGKA--- 120
Query: 422 VIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS---RFKAKIANFSLA 478
L+ + + N L Y H +VH+D++ NI KI +F LA
Sbjct: 121 ---LSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Query: 479 -------------------APAT--NDVMPKFDVFAFGVVLLELLSG 504
AP DV K D+++ GVV+ LL+G
Sbjct: 175 ELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 38/175 (21%)
Query: 354 VLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXX 413
++A ++ VTE R+LQ H L L + + V EYA G L + H
Sbjct: 43 IIAKDEVAHTVTES-RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--- 95
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+F R A ++ + L+Y+H +V+RDI+ N+ LD KI
Sbjct: 96 ----LSRERVFTEERARFYGA-EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKIT 147
Query: 474 NFSLA--------------------APAT---NDVMPKFDVFAFGVVLLELLSGK 505
+F L AP ND D + GVV+ E++ G+
Sbjct: 148 DFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 38/193 (19%)
Query: 343 KSVYRATIDGKVLAVK-KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAE 401
K V+ I K L +K +E ++ E+ I + + H ++V G D+ F+V E
Sbjct: 42 KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND-FVFVVLELCR 100
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
SL + LH LT + + G QY+H + ++HRD++ N
Sbjct: 101 RRSLLE-LHKRRKA---------LTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGN 147
Query: 462 IQLDSRFKAKIANFSLAAPATND-------------VMP----------KFDVFAFGVVL 498
+ L+ + KI +F LA D + P + DV++ G ++
Sbjct: 148 LFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 207
Query: 499 LELLSGKKATRTT 511
LL GK T+
Sbjct: 208 YTLLVGKPPFETS 220
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 36/165 (21%)
Query: 366 EELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFL 425
EE +++ + H LV+L V + + +++ EY GSL +L +I
Sbjct: 57 EEANLMKTLQHDKLVRLYAVVTREE-PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLI-- 113
Query: 426 TWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA------- 478
+ +A G+ Y+ + + +HRD+R N+ + KIA+F LA
Sbjct: 114 ------DFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 164
Query: 479 --------------APATND---VMPKFDVFAFGVVLLELLSGKK 506
AP + K DV++FG++L E+++ K
Sbjct: 165 YTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGK 209
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 49 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 108
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 109 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 158
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 159 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 218
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 219 VWSAGCVLAELLLGQ 233
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 38/193 (19%)
Query: 343 KSVYRATIDGKVLAVK-KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAE 401
K V+ I K L +K +E ++ E+ I + + H ++V G D+ F+V E
Sbjct: 40 KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV-FVVLELCR 98
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
SL + LH LT + + G QY+H + ++HRD++ N
Sbjct: 99 RRSLLE-LHKRRKA---------LTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGN 145
Query: 462 IQLDSRFKAKIANFSLAAPATND-------------VMP----------KFDVFAFGVVL 498
+ L+ + KI +F LA D + P + DV++ G ++
Sbjct: 146 LFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 205
Query: 499 LELLSGKKATRTT 511
LL GK T+
Sbjct: 206 YTLLVGKPPFETS 218
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 48 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 107
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 108 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 157
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 158 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 217
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 218 VWSAGCVLAELLLGQ 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 40 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 99
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 100 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 149
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 150 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 209
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 210 VWSAGCVLAELLLGQ 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 36 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 95
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 145
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 205
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 206 VWSAGCVLAELLLGQ 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 36 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 95
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 145
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 205
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 206 VWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 36 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 95
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 145
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 205
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 206 VWSAGCVLAELLLGQ 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 38/193 (19%)
Query: 343 KSVYRATIDGKVLAVK-KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAE 401
K V+ I K L +K +E ++ E+ I + + H ++V G D+ F+V E
Sbjct: 42 KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV-FVVLELCR 100
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
SL + LH LT + + G QY+H + ++HRD++ N
Sbjct: 101 RRSLLE-LHKRRKA---------LTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGN 147
Query: 462 IQLDSRFKAKIANFSLAAPATND-------------VMP----------KFDVFAFGVVL 498
+ L+ + KI +F LA D + P + DV++ G ++
Sbjct: 148 LFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 207
Query: 499 LELLSGKKATRTT 511
LL GK T+
Sbjct: 208 YTLLVGKPPFETS 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 37 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 96
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 97 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 146
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 147 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 206
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 207 VWSAGCVLAELLLGQ 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 55 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 114
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 115 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 164
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 165 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 224
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 225 VWSAGCVLAELLLGQ 239
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 38/193 (19%)
Query: 343 KSVYRATIDGKVLAVK-KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAE 401
K V+ I K L +K +E ++ E+ I + + H ++V G D+ F+V E
Sbjct: 46 KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV-FVVLELCR 104
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
SL + LH LT + + G QY+H + ++HRD++ N
Sbjct: 105 RRSLLE-LHKRRKA---------LTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGN 151
Query: 462 IQLDSRFKAKIANFSLAAPATND-------------VMP----------KFDVFAFGVVL 498
+ L+ + KI +F LA D + P + DV++ G ++
Sbjct: 152 LFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 211
Query: 499 LELLSGKKATRTT 511
LL GK T+
Sbjct: 212 YTLLVGKPPFETS 224
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 27/138 (19%)
Query: 353 KVLAVKKIKEDVTE--------ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGS 404
K++A+K I + E E+ +L +I H N+V L + +S G+ +L+ + G
Sbjct: 44 KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI-YESGGHLYLIMQLVSGGE 102
Query: 405 L-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI- 462
L D+ + F T R+ V + ++Y+H+ IVHRD++ N+
Sbjct: 103 LFDRIVEKG-----------FYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLL 148
Query: 463 --QLDSRFKAKIANFSLA 478
LD K I++F L+
Sbjct: 149 YYSLDEDSKIMISDFGLS 166
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 38/193 (19%)
Query: 343 KSVYRATIDGKVLAVK-KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAE 401
K V+ I K L +K +E ++ E+ I + + H ++V G D+ F+V E
Sbjct: 66 KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND-FVFVVLELCR 124
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
SL + LH LT + + G QY+H + ++HRD++ N
Sbjct: 125 RRSLLE-LHKRRKA---------LTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGN 171
Query: 462 IQLDSRFKAKIANFSLAAPATND-------------VMP----------KFDVFAFGVVL 498
+ L+ + KI +F LA D + P + DV++ G ++
Sbjct: 172 LFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 231
Query: 499 LELLSGKKATRTT 511
LL GK T+
Sbjct: 232 YTLLVGKPPFETS 244
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 46/195 (23%)
Query: 341 IGKSVYRATIDGKVLAVKKI-------KEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
+ + V +AT G+V K I K V E+ I+ +++H L+ L D +
Sbjct: 67 VHRCVEKAT--GRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-KYEM 123
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
L+ E+ G L + + ++ GL++MHEH SIV
Sbjct: 124 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMR---------QACEGLKHMHEH---SIV 171
Query: 454 HRDIRTNNIQLDSRFKA--KIANFSL-------------------AAPATNDVMP---KF 489
H DI+ NI +++ + KI +F L AAP D P
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYT 231
Query: 490 DVFAFGVVLLELLSG 504
D++A GV+ LLSG
Sbjct: 232 DMWAIGVLGYVLLSG 246
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKIKEDV---TEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ +D EL+I+++++H N+V+L SS + +
Sbjct: 44 VYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 103
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 104 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 153
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 154 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 213
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 214 VWSAGCVLAELLLGQ 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 43/177 (24%)
Query: 357 VKKIKEDVTEELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXX 415
V++++E +E+ IL++++ H N+++L + ++ FLV++ + G L +L
Sbjct: 50 VQELREATLKEVDILRKVSGHPNIIQLKD-TYETNTFFFLVFDLMKKGELFDYLTEKVTL 108
Query: 416 XXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF 475
I +R L+V L + +IVHRD++ NI LD K+ +F
Sbjct: 109 SEKETRKI-------MRALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDF 155
Query: 476 SLA-------------------AP-----ATNDVMPKF----DVFAFGVVLLELLSG 504
+ AP + ND P + D+++ GV++ LL+G
Sbjct: 156 GFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 38/193 (19%)
Query: 343 KSVYRATIDGKVLAVK-KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAE 401
K V+ I K L +K +E ++ E+ I + + H ++V G D+ F+V E
Sbjct: 64 KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV-FVVLELCR 122
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
SL + LH LT + + G QY+H + ++HRD++ N
Sbjct: 123 RRSLLE-LHKRRKA---------LTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGN 169
Query: 462 IQLDSRFKAKIANFSLAAPATND-------------VMP----------KFDVFAFGVVL 498
+ L+ + KI +F LA D + P + DV++ G ++
Sbjct: 170 LFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 229
Query: 499 LELLSGKKATRTT 511
LL GK T+
Sbjct: 230 YTLLVGKPPFETS 242
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 46/209 (22%)
Query: 328 IMESTMNLSEHYSIGK--SVYRATIDGKV-LAVKKIK------EDVTEELRILQRINHAN 378
I ++ L + G+ V+ AT + +AVK +K E E +++ + H
Sbjct: 12 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDK 71
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
LVKL V + +++ E+ GSL +L +I + +A
Sbjct: 72 LVKLHAVVTKEP--IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS--------AQIA 121
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-------------------- 478
G+ ++ Q + +HRD+R NI + + KIA+F LA
Sbjct: 122 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 178
Query: 479 -APAT---NDVMPKFDVFAFGVVLLELLS 503
AP K DV++FG++L+E+++
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 374 INHANLVKLMGVSSDSQGNR---FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQR 430
+ H N++ + G+ +L+ +Y ENGSL +L L
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-----------LDAKSM 136
Query: 431 LRVALDVANGLQYMHE-----HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
L++A +GL ++H +P+I HRD+++ NI + IA+ LA +D
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD 195
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 342 GKSVYRAT--IDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
GK+V A + VL+ + +D E+ + ++H NL++L GV +V E
Sbjct: 44 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTEL 101
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
A GSL L + T S R A+ VA G+ Y+ +HRD+
Sbjct: 102 APLGSLLDRLR------KHQGHFLLGTLS---RYAVQVAEGMGYLESK---RFIHRDLAA 149
Query: 460 NNIQLDSRFKAKIANFSL--AAPATND 484
N+ L +R KI +F L A P +D
Sbjct: 150 RNLLLATRDLVKIGDFGLMRALPQNDD 176
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 43/177 (24%)
Query: 357 VKKIKEDVTEELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXX 415
V++++E +E+ IL++++ H N+++L + ++ FLV++ + G L +L
Sbjct: 63 VQELREATLKEVDILRKVSGHPNIIQLKD-TYETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 416 XXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF 475
I +R L+V L + +IVHRD++ NI LD K+ +F
Sbjct: 122 SEKETRKI-------MRALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDF 168
Query: 476 SLA-------------------AP-----ATNDVMPKF----DVFAFGVVLLELLSG 504
+ AP + ND P + D+++ GV++ LL+G
Sbjct: 169 GFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 342 GKSVYRAT--IDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
GK+V A + VL+ + +D E+ + ++H NL++L GV +V E
Sbjct: 44 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTEL 101
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
A GSL L + T S R A+ VA G+ Y+ +HRD+
Sbjct: 102 APLGSLLDRLR------KHQGHFLLGTLS---RYAVQVAEGMGYLESK---RFIHRDLAA 149
Query: 460 NNIQLDSRFKAKIANFSL--AAPATND 484
N+ L +R KI +F L A P +D
Sbjct: 150 RNLLLATRDLVKIGDFGLMRALPQNDD 176
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 355 LAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXX 414
+++K +D EL+I+ I + + G+ ++ +++YEY EN S+ K+
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN-YDEVYIIYEYMENDSILKF--DEYF 137
Query: 415 XXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIAN 474
F+ + V N Y+H + +I HRD++ +NI +D + K+++
Sbjct: 138 FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSD 195
Query: 475 F 475
F
Sbjct: 196 F 196
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 36/175 (20%)
Query: 361 KEDVTEELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLH----PXXXX 415
KE + EL+I+ + H N+V L+G + G ++ EY G L +L P
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHG-GPVLVITEYCCYGDLLNFLRRKRPPGLEY 151
Query: 416 XXXXXXVIFLTWSQR--LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
S R L + VA G+ ++ A + +HRD+ N+ L + AKI
Sbjct: 152 SYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 208
Query: 474 NFSLAAPATNDV---------MP----------------KFDVFAFGVVLLELLS 503
+F LA ND +P + DV+++G++L E+ S
Sbjct: 209 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 43/177 (24%)
Query: 357 VKKIKEDVTEELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXX 415
V++++E +E+ IL++++ H N+++L + ++ FLV++ + G L +L
Sbjct: 63 VQELREATLKEVDILRKVSGHPNIIQLKD-TYETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 416 XXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANF 475
I +R L+V L + +IVHRD++ NI LD K+ +F
Sbjct: 122 SEKETRKI-------MRALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDF 168
Query: 476 SLA-------------------AP-----ATNDVMPKF----DVFAFGVVLLELLSG 504
+ AP + ND P + D+++ GV++ LL+G
Sbjct: 169 GFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 342 GKSVYRAT--IDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
GK+V A + VL+ + +D E+ + ++H NL++L GV +V E
Sbjct: 34 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTEL 91
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
A GSL L + T S R A+ VA G+ Y+ +HRD+
Sbjct: 92 APLGSLLDRLR------KHQGHFLLGTLS---RYAVQVAEGMGYLESK---RFIHRDLAA 139
Query: 460 NNIQLDSRFKAKIANFSL--AAPATND 484
N+ L +R KI +F L A P +D
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDD 166
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 32/151 (21%)
Query: 347 RATIDGKVLAVKKIKED------VTEELRILQRINHA-------------NLVKLMGVSS 387
R +D + A+KKI+ + E+ +L +NH N VK M +
Sbjct: 26 RNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM-TAV 84
Query: 388 DSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEH 447
+ F+ EY EN +L +H + R+ + L Y+H
Sbjct: 85 KKKSTLFIQMEYCENRTLYDLIHSENLNQQR---------DEYWRLFRQILEALSYIHSQ 135
Query: 448 AQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
I+HRD++ NI +D KI +F LA
Sbjct: 136 G---IIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 46/197 (23%)
Query: 339 YSIGK-SVYRAT-IDGKVLAVKKIKEDVTEELRILQRIN-HANLVKLMGVSSDSQGNRFL 395
YS+ K +++AT ++ V + K K D TEE+ IL R H N++ L V D + ++
Sbjct: 35 YSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGK-YVYV 93
Query: 396 VYEYAENGS-LDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
V E + G LDK L V+F + ++Y+H +VH
Sbjct: 94 VTELMKGGELLDKILRQKFFSEREASAVLFT-----------ITKTVEYLHAQG---VVH 139
Query: 455 RDIRTNNI----QLDSRFKAKIANFSLAAP-------------ATNDVMPKF-------- 489
RD++ +NI + + +I +F A N V P+
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDA 199
Query: 490 --DVFAFGVVLLELLSG 504
D+++ GV+L +L+G
Sbjct: 200 ACDIWSLGVLLYTMLTG 216
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 342 GKSVYRAT--IDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
GK+V A + VL+ + +D E+ + ++H NL++L GV +V E
Sbjct: 34 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTEL 91
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
A GSL L + T S R A+ VA G+ Y+ +HRD+
Sbjct: 92 APLGSLLDRLR------KHQGHFLLGTLS---RYAVQVAEGMGYLESK---RFIHRDLAA 139
Query: 460 NNIQLDSRFKAKIANFSL--AAPATND 484
N+ L +R KI +F L A P +D
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDD 166
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 73/186 (39%), Gaps = 46/186 (24%)
Query: 353 KVLAVKKIKEDVT----------EELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAEN 402
+ A+K +K+DV E R+L + M + ++ N F V EY
Sbjct: 44 QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG 103
Query: 403 GSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
G L H F A ++ GLQ++H IV+RD++ +NI
Sbjct: 104 GDL--MYHIQSCHKFDLSRATF--------YAAEIILGLQFLHSKG---IVYRDLKLDNI 150
Query: 463 QLDSRFKAKIANFS------LAAPATND-------VMPKF----------DVFAFGVVLL 499
LD KIA+F L TN+ + P+ D ++FGV+L
Sbjct: 151 LLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 210
Query: 500 ELLSGK 505
E+L G+
Sbjct: 211 EMLIGQ 216
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 342 GKSVYRAT--IDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
GK+V A + VL+ + +D E+ + ++H NL++L GV +V E
Sbjct: 38 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTEL 95
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
A GSL L + T S R A+ VA G+ Y+ +HRD+
Sbjct: 96 APLGSLLDRLR------KHQGHFLLGTLS---RYAVQVAEGMGYLESK---RFIHRDLAA 143
Query: 460 NNIQLDSRFKAKIANFSL--AAPATND 484
N+ L +R KI +F L A P +D
Sbjct: 144 RNLLLATRDLVKIGDFGLMRALPQNDD 170
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 342 GKSVYRAT--IDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
GK+V A + VL+ + +D E+ + ++H NL++L GV +V E
Sbjct: 34 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTEL 91
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
A GSL L + T S R A+ VA G+ Y+ +HRD+
Sbjct: 92 APLGSLLDRLR------KHQGHFLLGTLS---RYAVQVAEGMGYLESK---RFIHRDLAA 139
Query: 460 NNIQLDSRFKAKIANFSL--AAPATND 484
N+ L +R KI +F L A P +D
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDD 166
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGV----SSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V +S + N + + L+ + +
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 159
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 160 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 204
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 205 DDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKEIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EYA G + + H F A + +Y+H
Sbjct: 110 FKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARF--------YAAQIVLTFEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + K+ +F LA
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLA 188
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 342 GKSVYRAT--IDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEY 399
GK+V A + VL+ + +D E+ + ++H NL++L GV +V E
Sbjct: 38 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTEL 95
Query: 400 AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRT 459
A GSL L + T S R A+ VA G+ Y+ +HRD+
Sbjct: 96 APLGSLLDRLR------KHQGHFLLGTLS---RYAVQVAEGMGYLESK---RFIHRDLAA 143
Query: 460 NNIQLDSRFKAKIANFSL--AAPATND 484
N+ L +R KI +F L A P +D
Sbjct: 144 RNLLLATRDLVKIGDFGLMRALPQNDD 170
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 60/208 (28%)
Query: 341 IGKSVYRATIDGKVLAVK---------------KIKEDVTEELRILQRI-NHANLVKLMG 384
+ + V+RAT G AVK +++E E IL+++ H +++ L+
Sbjct: 110 VRRCVHRAT--GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167
Query: 385 VSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYM 444
S +S FLV++ G L +L + L+ + + + + ++
Sbjct: 168 -SYESSSFMFLVFDLMRKGELFDYL----------TEKVALSEKETRSIMRSLLEAVSFL 216
Query: 445 HEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA-------------------AP----- 480
H + +IVHRD++ NI LD + ++++F + AP
Sbjct: 217 HAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKC 273
Query: 481 ATNDVMPKF----DVFAFGVVLLELLSG 504
+ ++ P + D++A GV+L LL+G
Sbjct: 274 SMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 65/234 (27%)
Query: 319 KPIVYEIEV------IMESTMNLSEHYSIGKSVYRA------TIDGKVLAVKKIK----- 361
+P Y E+ + E NLS +G Y + T G +AVKK+
Sbjct: 24 RPTFYRQELNKTIWEVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 80
Query: 362 ----EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXX 413
+ ELR+L+ + H N++ L+ V + ++ N + + L+ +
Sbjct: 81 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 140
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI
Sbjct: 141 LTDDHVQFLIY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 186
Query: 474 NFSLAAPATNDVMPKF----------------------DVFAFGVVLLELLSGK 505
+F LA T+D M + D+++ G ++ ELL+G+
Sbjct: 187 DFGLAR-HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 65/234 (27%)
Query: 319 KPIVYEIEV------IMESTMNLSEHYSIGKSVYRA------TIDGKVLAVKKIK----- 361
+P Y E+ + E NLS +G Y + T G +AVKK+
Sbjct: 25 RPTFYRQELNKTIWEVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 81
Query: 362 ----EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXX 413
+ ELR+L+ + H N++ L+ V + ++ N + + L+ +
Sbjct: 82 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 141
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI
Sbjct: 142 LTDDHVQFLIY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 474 NFSLAAPATNDVMPKF----------------------DVFAFGVVLLELLSGK 505
+F LA T+D M + D+++ G ++ ELL+G+
Sbjct: 188 DFGLAR-HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 65/234 (27%)
Query: 319 KPIVYEIEV------IMESTMNLSEHYSIGKSVYRA------TIDGKVLAVKKIK----- 361
+P Y E+ + E NLS +G Y + T G +AVKK+
Sbjct: 1 RPTFYRQELAKTIWEVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 57
Query: 362 ----EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXX 413
+ ELR+L+ + H N++ L+ V + ++ N + + L+ +
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK 117
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI
Sbjct: 118 LTDDHVQFLIY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 163
Query: 474 NFSLAAPATNDVMPKF----------------------DVFAFGVVLLELLSGK 505
+F LA T+D M + D+++ G ++ ELL+G+
Sbjct: 164 DFGLAR-HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 65/234 (27%)
Query: 319 KPIVYEIEV------IMESTMNLSEHYSIGKSVYRA------TIDGKVLAVKKIK----- 361
+P Y E+ + E NLS +G Y + T G +AVKK+
Sbjct: 1 RPTFYRQELNKTIWEVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 57
Query: 362 ----EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXX 413
+ ELR+L+ + H N++ L+ V + ++ N + + L+ +
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 117
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI
Sbjct: 118 LTDDHVQFLIY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 163
Query: 474 NFSLAAPATNDVMPKF----------------------DVFAFGVVLLELLSGK 505
+F LA T+D M + D+++ G ++ ELL+G+
Sbjct: 164 DFGLAR-HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 65/234 (27%)
Query: 319 KPIVYEIEV------IMESTMNLSEHYSIGKSVYRA------TIDGKVLAVKKIK----- 361
+P Y E+ + E NLS +G Y + T G +AVKK+
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 61
Query: 362 ----EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXX 413
+ ELR+L+ + H N++ L+ V + ++ N + + L+ +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI
Sbjct: 122 LTDDHVQFLIY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 474 NFSLAAPATNDVMPKF----------------------DVFAFGVVLLELLSGK 505
+F LA T+D M + D+++ G ++ ELL+G+
Sbjct: 168 DFGLAR-HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 65/234 (27%)
Query: 319 KPIVYEIEV------IMESTMNLSEHYSIGKSVYRA------TIDGKVLAVKKIK----- 361
+P Y E+ + E NLS +G Y + T G +AVKK+
Sbjct: 11 RPTFYRQELNKTIWEVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 67
Query: 362 ----EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXX 413
+ ELR+L+ + H N++ L+ V + ++ N + + L+ +
Sbjct: 68 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 127
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI
Sbjct: 128 LTDDHVQFLIY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 173
Query: 474 NFSLAAPATNDVMPKF----------------------DVFAFGVVLLELLSGK 505
+F LA T+D M + D+++ G ++ ELL+G+
Sbjct: 174 DFGLAR-HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 46/186 (24%)
Query: 353 KVLAVKKIKEDVT----------EELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAEN 402
++ A+K +K+DV E R+L ++ + + + + V EY
Sbjct: 45 ELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNG 104
Query: 403 GSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
G L H +F A +++ GL ++H+ I++RD++ +N+
Sbjct: 105 GDL--MYHIQQVGKFKEPQAVFY--------AAEISIGLFFLHKRG---IIYRDLKLDNV 151
Query: 463 QLDSRFKAKIANFSLAAPATND-------------VMPKF----------DVFAFGVVLL 499
LDS KIA+F + D + P+ D +A+GV+L
Sbjct: 152 MLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLY 211
Query: 500 ELLSGK 505
E+L+G+
Sbjct: 212 EMLAGQ 217
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 44/183 (24%)
Query: 352 GKVLAVKKI----KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDK 407
K++ KK+ + + E RI + + H+N+V+L S+ +G +LV++ G L
Sbjct: 34 AKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISE-EGFHYLVFDLVTGGEL-- 90
Query: 408 WLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
++ + + + L+ + Q +VHRD++ N+ L S+
Sbjct: 91 -----------FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASK 139
Query: 468 FKA---KIANFSLAAPATNDVMPKF-----------------------DVFAFGVVLLEL 501
K K+A+F LA D F D++A GV+L L
Sbjct: 140 CKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYIL 199
Query: 502 LSG 504
L G
Sbjct: 200 LVG 202
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 50/192 (26%)
Query: 349 TIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFL 395
T G +AVKK+ + ELR+L+ + H N++ L+ V + ++ N
Sbjct: 54 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 113
Query: 396 VYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHR 455
+ + L+ + +I+ Q LR GL+Y+H I+HR
Sbjct: 114 LVTHLMGADLNNIVKCQKLTDDHVQFLIY----QILR-------GLKYIH---SADIIHR 159
Query: 456 DIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKF----------------------DVFA 493
D++ +N+ ++ + KI +F LA T+D M + D+++
Sbjct: 160 DLKPSNLAVNEDCELKILDFGLAR-HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 218
Query: 494 FGVVLLELLSGK 505
G ++ ELL+G+
Sbjct: 219 VGCIMAELLTGR 230
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 65/234 (27%)
Query: 319 KPIVYEIEV------IMESTMNLSEHYSIGKSVYRA------TIDGKVLAVKKIK----- 361
+P Y E+ + E NLS IG Y + T G +AVKK+
Sbjct: 10 RPTFYRQELNKTIWEVPERYQNLS---PIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 66
Query: 362 ----EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXX 413
+ ELR+L+ + H N++ L+ V + ++ N + + L+ +
Sbjct: 67 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI
Sbjct: 127 LTDDHVQFLIY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDXELKIL 172
Query: 474 NFSLAAPATNDVMPKF----------------------DVFAFGVVLLELLSGK 505
+F LA T+D M + D+++ G ++ ELL+G+
Sbjct: 173 DFGLAR-HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 143 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 187
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 143 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 187
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 143 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 187
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 44/183 (24%)
Query: 352 GKVLAVKKI----KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDK 407
K++ KK+ + + E RI + + H N+V+L S+ +G +LV++ G L
Sbjct: 61 AKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-EGFHYLVFDLVTGGEL-- 117
Query: 408 WLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
+ + + + + ++H+H IVHRD++ N+ L S+
Sbjct: 118 --------FEDIVAREYYSEADASHCIHQILESVNHIHQH---DIVHRDLKPENLLLASK 166
Query: 468 FKA---KIANFSLAAPATNDVMPKF-----------------------DVFAFGVVLLEL 501
K K+A+F LA + F D++A GV+L L
Sbjct: 167 CKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYIL 226
Query: 502 LSG 504
L G
Sbjct: 227 LVG 229
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EYA G + L F R A V +Y+H
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGR---------FXEPHARFYAAQIVLT-FEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + K+ +F A
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFA 188
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 133 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 177
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 136 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-HT 180
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 142 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-HT 186
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 154 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 198
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 199 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 347 RATIDGKV---LAVKKIKEDVTEELRILQRINHA---------NLVKLMGVSSDSQGNRF 394
R I G+ +AVK + E + RI + +N A ++V+L+GV S Q
Sbjct: 38 RDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPT-L 95
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V E +G L +L T + +++A ++A+G+ Y++ VH
Sbjct: 96 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 152
Query: 455 RDIRTNNIQLDSRFKAKIANFSL 477
RD+ N + F KI +F +
Sbjct: 153 RDLAARNCMVAHDFTVKIGDFGM 175
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 136 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 180
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 88/226 (38%), Gaps = 62/226 (27%)
Query: 329 MESTMNLSEHYSIGK----------SVYRATIDGKVLAVKKIKEDVTEELRILQR----- 373
M + +LS+ Y +G+ + R D + +AVK ++ D+ + R
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 374 -----INHANLVKL--MGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFL 425
+NH +V + G + G ++V EY + +L +H +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----------M 113
Query: 426 TWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---APAT 482
T + + V D L + H Q I+HRD++ NI + + K+ +F +A A +
Sbjct: 114 TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 483 NDVM-----------------------PKFDVFAFGVVLLELLSGK 505
N V + DV++ G VL E+L+G+
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 142 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 186
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 130 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 174
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 175 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 347 RATIDGKV---LAVKKIKEDVTEELRILQRINHA---------NLVKLMGVSSDSQGNRF 394
R I G+ +AVK + E + RI + +N A ++V+L+GV S Q
Sbjct: 39 RDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPT-L 96
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V E +G L +L T + +++A ++A+G+ Y++ VH
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 153
Query: 455 RDIRTNNIQLDSRFKAKIANFSL 477
RD+ N + F KI +F +
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGM 176
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 347 RATIDGKV---LAVKKIKEDVTEELRILQRINHA---------NLVKLMGVSSDSQGNRF 394
R I G+ +AVK + E + RI + +N A ++V+L+GV S Q
Sbjct: 39 RDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPT-L 96
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V E +G L +L T + +++A ++A+G+ Y++ VH
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 153
Query: 455 RDIRTNNIQLDSRFKAKIANFSL 477
RD+ N + F KI +F +
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGM 176
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 128 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 172
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 347 RATIDGKV---LAVKKIKEDVTEELRILQRINHA---------NLVKLMGVSSDSQGNRF 394
R I G+ +AVK + E + RI + +N A ++V+L+GV S Q
Sbjct: 39 RDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPT-L 96
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V E +G L +L T + +++A ++A+G+ Y++ VH
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 153
Query: 455 RDIRTNNIQLDSRFKAKIANFSL 477
RD+ N + F KI +F +
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGM 176
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 366 EELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFL 425
EE +++ + H LV+L V + + +++ E+ GSL +L +I
Sbjct: 56 EEANLMKTLQHDKLVRLYAVVTKEE-PIYIITEFMAKGSLLDFLKSDEGGKVLLPKLI-- 112
Query: 426 TWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ +A G+ Y+ + + +HRD+R N+ + KIA+F LA
Sbjct: 113 ------DFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLA 156
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 133 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 177
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 137 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 181
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 128
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 129 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 173
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 174 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 127 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 171
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 88/226 (38%), Gaps = 62/226 (27%)
Query: 329 MESTMNLSEHYSIGK----------SVYRATIDGKVLAVKKIKEDVTEELRILQR----- 373
M + +LS+ Y +G+ + R D + +AVK ++ D+ + R
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 374 -----INHANLVKL--MGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFL 425
+NH +V + G + G ++V EY + +L +H +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----------M 113
Query: 426 TWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---APAT 482
T + + V D L + H Q I+HRD++ NI + + K+ +F +A A +
Sbjct: 114 TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 483 NDVM-----------------------PKFDVFAFGVVLLELLSGK 505
N V + DV++ G VL E+L+G+
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 128 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 172
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 137 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 181
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 136 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 180
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 133 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 177
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 138 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 182
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 183 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 347 RATIDGKV---LAVKKIKEDVTEELRILQRINHA---------NLVKLMGVSSDSQGNRF 394
R I G+ +AVK + E + RI + +N A ++V+L+GV S Q
Sbjct: 39 RDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPT-L 96
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V E +G L +L T + +++A ++A+G+ Y++ VH
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 153
Query: 455 RDIRTNNIQLDSRFKAKIANFSL 477
RD+ N + F KI +F +
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGM 176
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 72/186 (38%), Gaps = 46/186 (24%)
Query: 353 KVLAVKKIKEDVT----------EELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAEN 402
+ A+K +K+DV E R+L + M + ++ N F V EY
Sbjct: 43 QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG 102
Query: 403 GSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
G L H F A ++ GLQ++H IV+RD++ +NI
Sbjct: 103 GDL--MYHIQSCHKFDLSRATF--------YAAEIILGLQFLHSKG---IVYRDLKLDNI 149
Query: 463 QLDSRFKAKIANFS------LAAPATND-------VMPKF----------DVFAFGVVLL 499
LD KIA+F L TN + P+ D ++FGV+L
Sbjct: 150 LLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 209
Query: 500 ELLSGK 505
E+L G+
Sbjct: 210 EMLIGQ 215
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 339 YSIGK-SVYRAT-IDGKVLAVKKIKEDVTEELRILQRIN-HANLVKLMGVSSDSQGNRFL 395
YS+ K +++AT + V + K K D TEE+ IL R H N++ L V D + ++
Sbjct: 35 YSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGK-YVYV 93
Query: 396 VYEYAENGS-LDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
V E + G LDK L V+F + ++Y+H +VH
Sbjct: 94 VTELXKGGELLDKILRQKFFSEREASAVLFT-----------ITKTVEYLHAQG---VVH 139
Query: 455 RDIRTNNI 462
RD++ +NI
Sbjct: 140 RDLKPSNI 147
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 154 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 198
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 199 DDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 150 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 194
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 151 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 195
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 91/223 (40%), Gaps = 56/223 (25%)
Query: 326 EVIMESTMNLSEHYSIGK---SVYRATID---GKVLAVKKIK------------EDVTEE 367
+V+ E L E IGK SV R I+ G+ AVK + ED+ E
Sbjct: 19 DVLFEDVYELCE--VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKRE 76
Query: 368 LRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTW 427
I + H ++V+L+ S S G ++V+E+ + L + +
Sbjct: 77 ASICHMLKHPHIVELLETYS-SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV---A 132
Query: 428 SQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKA---KIANFSLA------ 478
S +R L+ L+Y H++ +I+HRD++ N+ L S+ + K+ +F +A
Sbjct: 133 SHYMRQILE---ALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES 186
Query: 479 --------------APATNDVMP---KFDVFAFGVVLLELLSG 504
AP P DV+ GV+L LLSG
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 347 RATIDGKV---LAVKKIKEDVTEELRILQRINHA---------NLVKLMGVSSDSQGNRF 394
R I G+ +AVK + E + RI + +N A ++V+L+GV S Q
Sbjct: 36 RDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPT-L 93
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
+V E +G L +L T + +++A ++A+G+ Y++ VH
Sbjct: 94 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 150
Query: 455 RDIRTNNIQLDSRFKAKIANFSL 477
RD+ N + F KI +F +
Sbjct: 151 RDLAARNCMVAHDFTVKIGDFGM 173
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 65/234 (27%)
Query: 319 KPIVYEIEV------IMESTMNLSEHYSIGKSVYRA------TIDGKVLAVKKIK----- 361
+P Y E+ + E NLS +G Y + T G +AVKK+
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 61
Query: 362 ----EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXX 413
+ ELR+L+ + H N++ L+ V + ++ N + + L+ +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI
Sbjct: 122 LTDDHVQFLIY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 474 NFSLAAPATNDVMPKF----------------------DVFAFGVVLLELLSGK 505
+F LA T+D M + D+++ G ++ ELL+G+
Sbjct: 168 DFYLAR-HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EYA G + + H F A + +Y+H
Sbjct: 110 FKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + K+ +F A
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFA 188
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 133 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-HT 177
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKI---KEDVTEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ K EL+I+++++H N+V+L SS + +
Sbjct: 36 VYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 95
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 145
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 205
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 206 VWSAGCVLAELLLGQ 220
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 13/133 (9%)
Query: 361 KEDVTEELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENGSL--------DKWLHP 411
+E + EL++L + NH N+V L+G + G ++ EY G L D ++
Sbjct: 70 REALMSELKVLSYLGNHMNIVNLLGACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICS 128
Query: 412 XXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAK 471
+ L L + VA G+ ++ A + +HRD+ NI L K
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITK 185
Query: 472 IANFSLAAPATND 484
I +F LA ND
Sbjct: 186 ICDFGLARDIKND 198
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 137 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-HT 181
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 88/226 (38%), Gaps = 62/226 (27%)
Query: 329 MESTMNLSEHYSIGK----------SVYRATIDGKVLAVKKIKEDVTEELRILQR----- 373
M + +LS+ Y +G+ + R D + +AVK ++ D+ + R
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 374 -----INHANLVKL--MGVSSDSQGN-RFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFL 425
+NH +V + G + G ++V EY + +L +H +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----------M 113
Query: 426 TWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA---APAT 482
T + + V D L + H Q I+HRD++ NI + + K+ +F +A A +
Sbjct: 114 TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSG 170
Query: 483 NDVM-----------------------PKFDVFAFGVVLLELLSGK 505
N V + DV++ G VL E+L+G+
Sbjct: 171 NSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 35/167 (20%)
Query: 358 KKIKEDVTEELRILQRINHANLVKLMGV-SSDSQGNR--FLVYEYAENGSLDKWLHPXXX 414
K ++ EE L+ + H N+V+ S +G + LV E +G+L +L
Sbjct: 66 KSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKV 125
Query: 415 XXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS-RFKAKIA 473
+ +W ++ + GLQ++H P I+HRD++ +NI + KI
Sbjct: 126 XKIK----VLRSWCRQ------ILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIG 174
Query: 474 NFSLA----APATNDVM--PKF--------------DVFAFGVVLLE 500
+ LA A V+ P+F DV+AFG LE
Sbjct: 175 DLGLATLKRASFAKAVIGTPEFXAPEXYEEKYDESVDVYAFGXCXLE 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKI---KEDVTEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ K EL+I+++++H N+V+L SS + +
Sbjct: 36 VYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 95
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 145
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 205
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 206 VWSAGCVLAELLLGQ 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 29/157 (18%)
Query: 341 IGKSVYRATIDG------KVLAVKKIK--------EDVTEELRILQRINHANLVKLMGVS 386
IGK + G KV+A+K I ED+ +E+ +L + + + K G S
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG-S 93
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
+++ EY GS L P L +Q + ++ GL Y+H
Sbjct: 94 YLKDTKLWIIMEYLGGGSALDLLEPGP-----------LDETQIATILREILKGLDYLHS 142
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATN 483
+ +HRDI+ N+ L + K+A+F +A T+
Sbjct: 143 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD 176
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 60/208 (28%)
Query: 341 IGKSVYRAT---IDGKV---LAVKKI---------KEDVTEELRILQRINHANLVKLMGV 385
+G Y A +DG+ +A+KK+ + ELR+L+ + H N++ L+ V
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 386 SS-----DSQGNRFLVYEY--AENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
+ D + +LV + + G L K + FL + +
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMK------HEKLGEDRIQFLVYQ--------ML 138
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM----------PK 488
GL+Y+H I+HRD++ N+ ++ + KI +F LA A +++ P+
Sbjct: 139 KGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPE 195
Query: 489 -----------FDVFAFGVVLLELLSGK 505
D+++ G ++ E+++GK
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 65/234 (27%)
Query: 319 KPIVYEIEV------IMESTMNLSEHYSIGKSVYRA------TIDGKVLAVKKIK----- 361
+P Y E+ + E NLS +G Y + T G +AVKK+
Sbjct: 25 RPTFYRQELNKTIWEVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 81
Query: 362 ----EDVTEELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXX 413
+ ELR+L+ + H N++ L+ V + ++ N + + L+ +
Sbjct: 82 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 141
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
+I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI
Sbjct: 142 LTDDHVQFLIY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 474 NFSLAAPATNDVM-----------PKF-----------DVFAFGVVLLELLSGK 505
+F LA T+D M P+ D+++ G ++ ELL+G+
Sbjct: 188 DFGLAR-HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 13/133 (9%)
Query: 361 KEDVTEELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENGSL--------DKWLHP 411
+E + EL++L + NH N+V L+G + G ++ EY G L D ++
Sbjct: 86 REALMSELKVLSYLGNHMNIVNLLGACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICS 144
Query: 412 XXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAK 471
+ L L + VA G+ ++ A + +HRD+ NI L K
Sbjct: 145 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITK 201
Query: 472 IANFSLAAPATND 484
I +F LA ND
Sbjct: 202 ICDFGLARDIKND 214
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI F LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G D + H F A + +Y+H
Sbjct: 110 FKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + K+A+F A
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFA 188
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKEIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EYA G + + H F A + +Y+H
Sbjct: 110 FKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARF--------YAAQIVLTFEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + ++ +F LA
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLA 188
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G D + H F A + +Y+H
Sbjct: 110 FKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARF--------YAAQIVLTFEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + K+A+F A
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFA 188
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 13/133 (9%)
Query: 361 KEDVTEELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENGSL--------DKWLHP 411
+E + EL++L + NH N+V L+G + G ++ EY G L D ++
Sbjct: 93 REALMSELKVLSYLGNHMNIVNLLGACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 412 XXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAK 471
+ L L + VA G+ ++ A + +HRD+ NI L K
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITK 208
Query: 472 IANFSLAAPATND 484
I +F LA ND
Sbjct: 209 ICDFGLARDIKND 221
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 75/200 (37%), Gaps = 49/200 (24%)
Query: 340 SIGKSVY-RATIDGKVLAVKKIKEDVT----------EELRILQRI-NHANLVKLMGVSS 387
S GK + R G + AVK +K+DV E RIL NH L +L
Sbjct: 35 SFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF-CCF 93
Query: 388 DSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEH 447
+ F V E+ G L H F A ++ + L ++H+
Sbjct: 94 QTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARF--------YAAEIISALMFLHDK 143
Query: 448 AQPSIVHRDIRTNNIQLDSRFKAKIANFSLA--------------------APATNDVM- 486
I++RD++ +N+ LD K+A+F + AP M
Sbjct: 144 G---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 487 --PKFDVFAFGVVLLELLSG 504
P D +A GV+L E+L G
Sbjct: 201 YGPAVDWWAMGVLLYEMLCG 220
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 13/133 (9%)
Query: 361 KEDVTEELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENGSL--------DKWLHP 411
+E + EL++L + NH N+V L+G + G ++ EY G L D ++
Sbjct: 88 REALMSELKVLSYLGNHMNIVNLLGACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICS 146
Query: 412 XXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAK 471
+ L L + VA G+ ++ A + +HRD+ NI L K
Sbjct: 147 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITK 203
Query: 472 IANFSLAAPATND 484
I +F LA ND
Sbjct: 204 ICDFGLARDIKND 216
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXX 421
ED E+ IL +H +VKL+G G +++ E+ G++D +
Sbjct: 53 EDYIVEIEILATCDHPYIVKLLGAYY-HDGKLWIMIEFCPGGAVDAIMLELDRG------ 105
Query: 422 VIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
LT Q V + L ++H I+HRD++ N+ + ++A+F ++A
Sbjct: 106 ---LTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA 157
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 16/145 (11%)
Query: 335 LSEHYSIGKSVYRATIDG-KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
L +H G +D KV+ +K+I+ + E+ RILQ +N LVKL S N
Sbjct: 60 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNL 117
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EYA G + + H F A + +Y+H ++
Sbjct: 118 YMVMEYAPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLI 164
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA 478
+RD++ N+ +D + K+ +F A
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFA 189
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 110
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 110
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 110
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 13/133 (9%)
Query: 361 KEDVTEELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENGSL--------DKWLHP 411
+E + EL++L + NH N+V L+G + G ++ EY G L D ++
Sbjct: 93 REALMSELKVLSYLGNHMNIVNLLGACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 412 XXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAK 471
+ L L + VA G+ ++ A + +HRD+ NI L K
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITK 208
Query: 472 IANFSLAAPATND 484
I +F LA ND
Sbjct: 209 ICDFGLARHIKND 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 44/195 (22%)
Query: 345 VYRATI--DGKVLAVKKI---KEDVTEELRILQRINHANLVKL--MGVSSDSQGNRF--- 394
VY+A + G+++A+KK+ K EL+I+++++H N+V+L SS + +
Sbjct: 36 VYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 95
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV +Y H + L Q R L Y+H I H
Sbjct: 96 LVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR-------SLAYIHSFG---ICH 145
Query: 455 RDIRTNNIQLDSRFKA-KIANFSLA-------------------AP----ATNDVMPKFD 490
RDI+ N+ LD K+ +F A AP D D
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 205
Query: 491 VFAFGVVLLELLSGK 505
V++ G VL ELL G+
Sbjct: 206 VWSAGCVLAELLLGQ 220
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 110
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 109
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 110 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 162
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 163 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 35/177 (19%)
Query: 353 KVLAVK----KIKEDVTEELRILQRINHANLVKLMGV-SSDSQGNRFLVYEYAENGSLDK 407
KVL V+ + D EE L+ +H N++ ++G S + L+ + GSL
Sbjct: 39 KVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYN 98
Query: 408 WLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
LH + SQ ++ ALD+A G+ ++H +P I + + ++ +D
Sbjct: 99 VLHEGTN--------FVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDED 149
Query: 468 FKAKIA----NFSLAAP----ATNDVMPK-------------FDVFAFGVVLLELLS 503
A+I+ FS +P A V P+ D+++F V+L EL++
Sbjct: 150 MTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 110
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 175
Query: 483 NDVM-----------PKF-----------DVFAFGVVLLELLSGK 505
+D M P+ D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 109
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 110 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 162
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 163 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 110
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 110
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G + + H F A + +Y+H
Sbjct: 110 FKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + K+A+F A
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFA 188
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 18/138 (13%)
Query: 361 KEDVTEELRILQRIN-HANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
KE + EL+I+ + H N+V L+G + G ++ EY G L +L
Sbjct: 78 KEALMSELKIMSHLGQHENIVNLLGACTHG-GPVLVITEYCCYGDLLNFLRRKAEAMLGP 136
Query: 420 XXVIF-------------LTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
L L + VA G+ ++ A + +HRD+ N+ L +
Sbjct: 137 SLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTN 193
Query: 467 RFKAKIANFSLAAPATND 484
AKI +F LA ND
Sbjct: 194 GHVAKIGDFGLARDIMND 211
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 362 EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXX 421
ED E+ IL +H +VKL+G G +++ E+ G++D +
Sbjct: 61 EDYIVEIEILATCDHPYIVKLLGAYY-HDGKLWIMIEFCPGGAVDAIMLELDRG------ 113
Query: 422 VIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
LT Q V + L ++H I+HRD++ N+ + ++A+F ++A
Sbjct: 114 ---LTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA 165
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 110
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 110
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 164 LAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 138 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 182
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
D M + D+++ G ++ ELL+G+
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 110
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 43/193 (22%)
Query: 344 SVYRATIDGKVLAVKKIKEDVT---------EELRILQRINHANLVKLMGVSSDSQGNRF 394
S Y A + KV AVKK+ ELR+L+ + H N++ L+ V + +
Sbjct: 38 SAYDARLRQKV-AVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIED 96
Query: 395 LVYEYAENGSLDKWLHPXXX-XXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
Y + L+ V FL + Q LR GL+Y+H I+
Sbjct: 97 FSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY-QLLR-------GLKYIH---SAGII 145
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM----------PKF-----------DVF 492
HRD++ +N+ ++ + +I +F LA A ++ P+ D++
Sbjct: 146 HRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 205
Query: 493 AFGVVLLELLSGK 505
+ G ++ ELL GK
Sbjct: 206 SVGCIMAELLQGK 218
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 138 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 182
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
D M + D+++ G ++ ELL+G+
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 26/95 (27%)
Query: 434 ALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA--------------- 478
A ++A GL ++ I++RD++ +N+ LDS KIA+F +
Sbjct: 448 AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCG 504
Query: 479 -----APATNDVMP---KFDVFAFGVVLLELLSGK 505
AP P D +AFGV+L E+L+G+
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 39/174 (22%)
Query: 356 AVKKIKEDVTEELR--ILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXX 413
A K+++ V ++ IL +NH +VKL + ++G +L+ ++ G L L
Sbjct: 63 ATLKVRDRVRTKMERDILVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRL---- 117
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
V+F + +A ++A L ++H I++RD++ NI LD K+
Sbjct: 118 -----SKEVMFTEEDVKFYLA-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLT 168
Query: 474 NFSLAAPATNDVMPKF-----------------------DVFAFGVVLLELLSG 504
+F L+ + + + D ++FGV++ E+L+G
Sbjct: 169 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI ++ LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKES------ 110
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 26/95 (27%)
Query: 434 ALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA--------------- 478
A ++A GL ++ I++RD++ +N+ LDS KIA+F +
Sbjct: 127 AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCG 183
Query: 479 -----APATNDVMP---KFDVFAFGVVLLELLSGK 505
AP P D +AFGV+L E+L+G+
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F LA T
Sbjct: 138 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HT 182
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
D M + D+++ G ++ ELL+G+
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 29/154 (18%)
Query: 340 SIGKSVYRATIDGK------VLAVKKIKED---------VTEELRILQRINHANLVKLMG 384
IG+ Y K ++A+K+++ D E+ +L+ + H N+V+L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 385 VSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYM 444
V S LV+E+ + L K+ FL + GL +
Sbjct: 69 VLH-SDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFL---------FQLLKGLGFC 117
Query: 445 HEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
H +++HRD++ N+ ++ + K+ANF LA
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 78/201 (38%), Gaps = 47/201 (23%)
Query: 355 LAVKKIKEDVT---------EELRILQRINHANLVKLMGVSSDSQGNRFL-----VYEYA 400
+AVK +K D+ E ++ +H ++ KL+GVS S+ L + +
Sbjct: 54 VAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFM 113
Query: 401 ENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTN 460
++G L H L +R +D+A G++Y+ + + +HRD+
Sbjct: 114 KHGDL----HAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAAR 166
Query: 461 NIQLDSRFKAKIANFSLA-------------------------APATNDVMPKFDVFAFG 495
N L +A+F L+ + A N DV+AFG
Sbjct: 167 NCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFG 226
Query: 496 VVLLELLS-GKKATRTTENGK 515
V + E+++ G+ EN +
Sbjct: 227 VTMWEIMTRGQTPYAGIENAE 247
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 39/174 (22%)
Query: 356 AVKKIKEDVTEELR--ILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXX 413
A K+++ V ++ IL +NH +VKL + ++G +L+ ++ G L L
Sbjct: 64 ATLKVRDRVRTKMERDILVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRL---- 118
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
V+F + +A ++A L ++H I++RD++ NI LD K+
Sbjct: 119 -----SKEVMFTEEDVKFYLA-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLT 169
Query: 474 NFSLAAPATNDVMPKF-----------------------DVFAFGVVLLELLSG 504
+F L+ + + + D ++FGV++ E+L+G
Sbjct: 170 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 39/174 (22%)
Query: 356 AVKKIKEDVTEELR--ILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXX 413
A K+++ V ++ IL +NH +VKL + ++G +L+ ++ G L L
Sbjct: 63 ATLKVRDRVRTKMERDILVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRL---- 117
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
V+F + +A ++A L ++H I++RD++ NI LD K+
Sbjct: 118 -----SKEVMFTEEDVKFYLA-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLT 168
Query: 474 NFSLAAPATNDVMPKF-----------------------DVFAFGVVLLELLSG 504
+F L+ + + + D ++FGV++ E+L+G
Sbjct: 169 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 41/192 (21%)
Query: 344 SVYRATIDGKVLAVKKIKEDVT---------EELRILQRINHANLVKLMGVSSDSQGNRF 394
S Y A + KV AVKK+ ELR+L+ + H N++ L+ V + +
Sbjct: 46 SAYDARLRQKV-AVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIED 104
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y + L+ + Q LR GL+Y+H I+H
Sbjct: 105 FSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLR-------GLKYIH---SAGIIH 154
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM----------PKF-----------DVFA 493
RD++ +N+ ++ + +I +F LA A ++ P+ D+++
Sbjct: 155 RDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 494 FGVVLLELLSGK 505
G ++ ELL GK
Sbjct: 215 VGCIMAELLQGK 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 43/193 (22%)
Query: 344 SVYRATIDGKVLAVKKIKEDVT---------EELRILQRINHANLVKLMGVSSDSQGNRF 394
S Y A + KV AVKK+ ELR+L+ + H N++ L+ V + +
Sbjct: 46 SAYDARLRQKV-AVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIED 104
Query: 395 LVYEYAENGSLDKWLHPXXX-XXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
Y + L+ V FL + Q LR GL+Y+H I+
Sbjct: 105 FSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY-QLLR-------GLKYIH---SAGII 153
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM----------PKF-----------DVF 492
HRD++ +N+ ++ + +I +F LA A ++ P+ D++
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 493 AFGVVLLELLSGK 505
+ G ++ ELL GK
Sbjct: 214 SVGCIMAELLQGK 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI +F L T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 44/183 (24%)
Query: 352 GKVLAVKKI----KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDK 407
K++ KK+ + + E RI + + H N+V+L S+ +G+ +L+++ G L
Sbjct: 52 AKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-EGHHYLIFDLVTGGEL-- 108
Query: 408 WLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
++ + + + L+ + Q +VHRD++ N+ L S+
Sbjct: 109 -----------FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASK 157
Query: 468 FKA---KIANFSLAAPATNDVMPKF-----------------------DVFAFGVVLLEL 501
K K+A+F LA + F D++A GV+L L
Sbjct: 158 LKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL 217
Query: 502 LSG 504
L G
Sbjct: 218 LVG 220
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 32/98 (32%)
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA-------PATNDVMPK 488
+V GL+Y+H++ Q +HRD++ NI L +IA+F ++A N V
Sbjct: 129 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 489 F----------------------DVFAFGVVLLELLSG 504
F D+++FG+ +EL +G
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 29/157 (18%)
Query: 341 IGKSVYRATIDG------KVLAVKKI--------KEDVTEELRILQRINHANLVKLMGVS 386
IGK + G KV+A+K I ED+ +E+ +L + + + K G S
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG-S 73
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
+++ EY GS L P L +Q + ++ GL Y+H
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGP-----------LDETQIATILREILKGLDYLHS 122
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATN 483
+ +HRDI+ N+ L + K+A+F +A T+
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD 156
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 29/157 (18%)
Query: 341 IGKSVYRATIDG------KVLAVKKI--------KEDVTEELRILQRINHANLVKLMGVS 386
IGK + G KV+A+K I ED+ +E+ +L + + + K G S
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG-S 73
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
+++ EY GS L P L +Q + ++ GL Y+H
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGP-----------LDETQIATILREILKGLDYLHS 122
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATN 483
+ +HRDI+ N+ L + K+A+F +A T+
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD 156
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 32/98 (32%)
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA-------PATNDVMPK 488
+V GL+Y+H++ Q +HRD++ NI L +IA+F ++A N V
Sbjct: 124 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 489 F----------------------DVFAFGVVLLELLSG 504
F D+++FG+ +EL +G
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 432 RVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
++A+ + L+ H H++ S++HRD++ +N+ +++ + K+ +F ++ +DV D
Sbjct: 113 KIAVSIVKALE--HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID 169
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 29/157 (18%)
Query: 341 IGKSVYRATIDG------KVLAVKKIK--------EDVTEELRILQRINHANLVKLMGVS 386
IGK + G KV+A+K I ED+ +E+ +L + + + K G S
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG-S 88
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
+++ EY GS L P L +Q + ++ GL Y+H
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEPGP-----------LDETQIATILREILKGLDYLHS 137
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATN 483
+ +HRDI+ N+ L + K+A+F +A T+
Sbjct: 138 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+ED+ E+ IL+ I H N++ L V +++ + L+ E G L +L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEV-YENKTDVILIGELVAGGELFDFLAEKES------ 110
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + NG+ Y+H I H D++ NI L R + KI +F
Sbjct: 111 ----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
LA AP + P + D+++ GV+ LLSG
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 76/184 (41%), Gaps = 41/184 (22%)
Query: 352 GKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAEN 402
G+ +A+KK+ + EL +L+ + H N++ L+ V + + R Y
Sbjct: 67 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126
Query: 403 GSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
+ L + +L + + GL+Y+H +VHRD++ N+
Sbjct: 127 PFMQTDLQKIMGMEFSEEKIQYLVYQ--------MLKGLKYIHS---AGVVHRDLKPGNL 175
Query: 463 QLDSRFKAKIANFSLA----APATNDVMPKF-----------------DVFAFGVVLLEL 501
++ + KI +F LA A T V+ ++ D+++ G ++ E+
Sbjct: 176 AVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 235
Query: 502 LSGK 505
L+GK
Sbjct: 236 LTGK 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EYA G + + H F A + +Y+H
Sbjct: 110 FKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + ++ +F A
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFA 188
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 25/122 (20%)
Query: 364 VTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVI 423
VT E+ IL R+ HAN++K++ + ++QG LV E +G LD +
Sbjct: 76 VTLEIAILSRVEHANIIKVLDI-FENQGFFQLVMEKHGSG-LDLF--------------A 119
Query: 424 FLTWSQRLRVAL------DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSL 477
F+ RL L + + + Y+ I+HRDI+ NI + F K+ +F
Sbjct: 120 FIDRHPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGS 176
Query: 478 AA 479
AA
Sbjct: 177 AA 178
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +L+ + H N++ L+ V + + R Y + L + +L
Sbjct: 73 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV 132
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA----APAT 482
+ + GL+Y+H +VHRD++ N+ ++ + KI +F LA A T
Sbjct: 133 YQ--------MLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 181
Query: 483 NDVMPKF-----------------DVFAFGVVLLELLSGK 505
V+ ++ D+++ G ++ E+L+GK
Sbjct: 182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 29/101 (28%)
Query: 432 RVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA------------ 479
++ + + L Y+ E + ++HRD++ +NI LD R + K+ +F ++
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 480 ---------------PATNDVMPKFDVFAFGVVLLELLSGK 505
P D + DV++ G+ L+EL +G+
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 27/142 (19%)
Query: 350 IDGKVLAVKKIK---EDVTE------ELRILQRINHANLVKLMGVSSDSQGNRF----LV 396
++ +V+A+KKI ED+ + E+ IL R+NH ++VK++ + +F +V
Sbjct: 76 LEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVV 135
Query: 397 YEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRD 456
E A++ + P ++LT + ++ G++Y+H I+HRD
Sbjct: 136 LEIADSDFKKLFRTP-----------VYLTELHIKTLLYNLLVGVKYVH---SAGILHRD 181
Query: 457 IRTNNIQLDSRFKAKIANFSLA 478
++ N ++ K+ +F LA
Sbjct: 182 LKPANCLVNQDCSVKVCDFGLA 203
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 16/145 (11%)
Query: 335 LSEHYSIGKSVYRATIDG-KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
L +H G +D KV+ +K+I+ + E+ RI Q +N LVKL S N
Sbjct: 60 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RIQQAVNFPFLVKLE-FSFKDNSNL 117
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EYA G + + H F A + +Y+H ++
Sbjct: 118 YMVLEYAPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLI 164
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA 478
+RD++ N+ +D + K+A+F A
Sbjct: 165 YRDLKPENLLIDQQGYIKVADFGFA 189
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 22/132 (16%)
Query: 355 LAVKKIKEDVT--------EELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+AVK K+D T E I++ ++H ++VKL+G+ + +++ E G L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP--TWIIMELYPYGELG 112
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L V++ +L + + Y+ + VHRDI NI + S
Sbjct: 113 HYLERNKNSLKVLTLVLY---------SLQICKAMAYLE---SINCVHRDIAVRNILVAS 160
Query: 467 RFKAKIANFSLA 478
K+ +F L+
Sbjct: 161 PECVKLGDFGLS 172
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 38/204 (18%)
Query: 343 KSVYRATIDGKVLAVK-KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAE 401
K V+ + K + +K KE ++ E+ I + +++ ++V G D ++V E
Sbjct: 67 KEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFV-YVVLEICR 125
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
SL + LH F+ + G+QY+H + ++HRD++ N
Sbjct: 126 RRSLLE-LHKRRKAVTEPEARYFMRQT---------IQGVQYLHNN---RVIHRDLKLGN 172
Query: 462 IQLDSRFKAKIANFSLAAP-------------ATNDVMP----------KFDVFAFGVVL 498
+ L+ KI +F LA N + P + D+++ G +L
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
Query: 499 LELLSGKKATRTTENGKTAVLWKE 522
LL GK T+ +T + K+
Sbjct: 233 YTLLVGKPPFETSCLKETYIRIKK 256
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 23/145 (15%)
Query: 347 RATIDGKVLAVKKIKEDVTEELRILQRIN-------HANLVKLMG--VSSDSQG---NRF 394
R G++ A+K + EE I Q IN H N+ G + + G +
Sbjct: 44 RHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV E+ GS+ + + + + ++ GL ++H+H ++H
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--------ICREILRGLSHLHQH---KVIH 152
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAA 479
RDI+ N+ L + K+ +F ++A
Sbjct: 153 RDIKGQNVLLTENAEVKLVDFGVSA 177
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 38/204 (18%)
Query: 343 KSVYRATIDGKVLAVK-KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAE 401
K V+ + K + +K KE ++ E+ I + +++ ++V G D ++V E
Sbjct: 67 KEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFV-YVVLEICR 125
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
SL + LH F+ + G+QY+H + ++HRD++ N
Sbjct: 126 RRSLLE-LHKRRKAVTEPEARYFMRQT---------IQGVQYLHNN---RVIHRDLKLGN 172
Query: 462 IQLDSRFKAKIANFSLAAP-------------ATNDVMP----------KFDVFAFGVVL 498
+ L+ KI +F LA N + P + D+++ G +L
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
Query: 499 LELLSGKKATRTTENGKTAVLWKE 522
LL GK T+ +T + K+
Sbjct: 233 YTLLVGKPPFETSCLKETYIRIKK 256
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 22/132 (16%)
Query: 355 LAVKKIKEDVT--------EELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+AVK K+D T E I++ ++H ++VKL+G+ + +++ E G L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP--TWIIMELYPYGELG 100
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L V++ +L + + Y+ + VHRDI NI + S
Sbjct: 101 HYLERNKNSLKVLTLVLY---------SLQICKAMAYLE---SINCVHRDIAVRNILVAS 148
Query: 467 RFKAKIANFSLA 478
K+ +F L+
Sbjct: 149 PECVKLGDFGLS 160
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 38/204 (18%)
Query: 343 KSVYRATIDGKVLAVK-KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAE 401
K V+ + K + +K KE ++ E+ I + +++ ++V G D ++V E
Sbjct: 67 KEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFV-YVVLEICR 125
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
SL + LH F+ + G+QY+H + ++HRD++ N
Sbjct: 126 RRSLLE-LHKRRKAVTEPEARYFMRQT---------IQGVQYLHNN---RVIHRDLKLGN 172
Query: 462 IQLDSRFKAKIANFSLAAP-------------ATNDVMP----------KFDVFAFGVVL 498
+ L+ KI +F LA N + P + D+++ G +L
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
Query: 499 LELLSGKKATRTTENGKTAVLWKE 522
LL GK T+ +T + K+
Sbjct: 233 YTLLVGKPPFETSCLKETYIRIKK 256
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 38/204 (18%)
Query: 343 KSVYRATIDGKVLAVK-KIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAE 401
K V+ + K + +K KE ++ E+ I + +++ ++V G D ++V E
Sbjct: 51 KEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFV-YVVLEICR 109
Query: 402 NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNN 461
SL + LH F+ + G+QY+H + ++HRD++ N
Sbjct: 110 RRSLLE-LHKRRKAVTEPEARYFMRQT---------IQGVQYLHNN---RVIHRDLKLGN 156
Query: 462 IQLDSRFKAKIANFSLAAP-------------ATNDVMP----------KFDVFAFGVVL 498
+ L+ KI +F LA N + P + D+++ G +L
Sbjct: 157 LFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 216
Query: 499 LELLSGKKATRTTENGKTAVLWKE 522
LL GK T+ +T + K+
Sbjct: 217 YTLLVGKPPFETSCLKETYIRIKK 240
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 317 LGKPIVYEI--EVIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKE--------DVTE 366
+ K IVY I + ++S + + + + ++ T G+++A+KKI+
Sbjct: 1 MPKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPT--GEIVAIKKIEPFDKPLFALRTLR 58
Query: 367 ELRILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFL 425
E++IL+ H N++ + + DS N VY E D LH I
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQY 116
Query: 426 TWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
Q LR A+ V +G +++HRD++ +N+ ++S K+ +F LA
Sbjct: 117 FIYQTLR-AVKVLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 317 LGKPIVYEI--EVIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKE--------DVTE 366
+ K IVY I + ++S + + + + ++ T G+++A+KKI+
Sbjct: 1 MPKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPT--GEIVAIKKIEPFDKPLFALRTLR 58
Query: 367 ELRILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFL 425
E++IL+ H N++ + + DS N VY E D LH I
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQY 116
Query: 426 TWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
Q LR A+ V +G +++HRD++ +N+ ++S K+ +F LA
Sbjct: 117 FIYQTLR-AVKVLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 317 LGKPIVYEI--EVIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKE--------DVTE 366
+ K IVY I + ++S + + + + ++ T G+++A+KKI+
Sbjct: 1 MPKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPT--GEIVAIKKIEPFDKPLFALRTLR 58
Query: 367 ELRILQRINHANLVKLMGVS-SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFL 425
E++IL+ H N++ + + DS N VY E D LH I
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQY 116
Query: 426 TWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
Q LR A+ V +G +++HRD++ +N+ ++S K+ +F LA
Sbjct: 117 FIYQTLR-AVKVLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++E +E +++ +H ++VKL+GV +++ +++ E G L +L
Sbjct: 82 VREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYSLDLA 139
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+++ A ++ L Y+ VHRDI N+ + S K+ +F L+
Sbjct: 140 SLILY---------AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 187
Query: 480 --------PATNDVMP------------KF----DVFAFGVVLLELL 502
A+ +P +F DV+ FGV + E+L
Sbjct: 188 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 39/138 (28%)
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EY + +L +H +T + + V D L + H Q I+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGP----------MTPKRAIEVIADACQALNFSH---QNGII 138
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA---APATNDVM-----------------------P 487
HRD++ NI + + K+ +F +A A + N V
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 488 KFDVFAFGVVLLELLSGK 505
+ DV++ G VL E+L+G+
Sbjct: 199 RSDVYSLGCVLYEVLTGE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 39/138 (28%)
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EY + +L +H +T + + V D L + H Q I+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGP----------MTPKRAIEVIADACQALNFSH---QNGII 138
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA---APATNDVM-----------------------P 487
HRD++ NI + + K+ +F +A A + N V
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 488 KFDVFAFGVVLLELLSGK 505
+ DV++ G VL E+L+G+
Sbjct: 199 RSDVYSLGCVLYEVLTGE 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 22/132 (16%)
Query: 355 LAVKKIKEDVT--------EELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+AVK K+D T E I++ ++H ++VKL+G+ + +++ E G L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP--TWIIMELYPYGELG 96
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
+L V++ +L + + Y+ + VHRDI NI + S
Sbjct: 97 HYLERNKNSLKVLTLVLY---------SLQICKAMAYLE---SINCVHRDIAVRNILVAS 144
Query: 467 RFKAKIANFSLA 478
K+ +F L+
Sbjct: 145 PECVKLGDFGLS 156
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++E +E +++ +H ++VKL+GV +++ +++ E G L +L
Sbjct: 59 VREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYSLDLA 116
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+++ A ++ L Y+ VHRDI N+ + S K+ +F L+
Sbjct: 117 SLILY---------AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164
Query: 480 --------PATNDVMP------------KF----DVFAFGVVLLELL 502
A+ +P +F DV+ FGV + E+L
Sbjct: 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 44/183 (24%)
Query: 352 GKVLAVKKI----KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDK 407
K++ KK+ + + E RI + + H N+V+L S+ +G +LV++ G L
Sbjct: 34 AKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-EGFHYLVFDLVTGGEL-- 90
Query: 408 WLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
++ + + + L+ ++ IVHRD++ N+ L S+
Sbjct: 91 -----------FEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASK 139
Query: 468 FKA---KIANFSLAAPATNDVMPKF-----------------------DVFAFGVVLLEL 501
K K+A+F LA D F D++A GV+L L
Sbjct: 140 SKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL 199
Query: 502 LSG 504
L G
Sbjct: 200 LVG 202
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++E +E +++ +H ++VKL+GV +++ +++ E G L +L
Sbjct: 54 VREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKFSLDLA 111
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA- 478
+++ A ++ L Y+ VHRDI N+ + S K+ +F L+
Sbjct: 112 SLILY---------AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 479 -------APATNDVMP------------KF----DVFAFGVVLLELL 502
A+ +P +F DV+ FGV + E+L
Sbjct: 160 YMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 44/183 (24%)
Query: 352 GKVLAVKKI----KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDK 407
K++ KK+ + + E RI + + H N+V+L S+ +G +LV++ G L
Sbjct: 34 AKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-EGFHYLVFDLVTGGEL-- 90
Query: 408 WLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
++ + + + L+ ++ IVHRD++ N+ L S+
Sbjct: 91 -----------FEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASK 139
Query: 468 FKA---KIANFSLAAPATNDVMPKF-----------------------DVFAFGVVLLEL 501
K K+A+F LA D F D++A GV+L L
Sbjct: 140 SKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL 199
Query: 502 LSG 504
L G
Sbjct: 200 LVG 202
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 39/138 (28%)
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EY + +L +H +T + + V D L + H Q I+
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGP----------MTPKRAIEVIADACQALNFSH---QNGII 155
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA---APATNDVM-----------------------P 487
HRD++ NI + + K+ +F +A A + N V
Sbjct: 156 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 215
Query: 488 KFDVFAFGVVLLELLSGK 505
+ DV++ G VL E+L+G+
Sbjct: 216 RSDVYSLGCVLYEVLTGE 233
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 29/154 (18%)
Query: 340 SIGKSVYRATIDGK------VLAVKKIKED---------VTEELRILQRINHANLVKLMG 384
IG+ Y K ++A+K+++ D E+ +L+ + H N+V+L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 385 VSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYM 444
V S LV+E+ + L K+ FL + GL +
Sbjct: 69 VLH-SDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFL---------FQLLKGLGFC 117
Query: 445 HEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
H +++HRD++ N+ ++ + K+A+F LA
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++E +E +++ +H ++VKL+GV +++ +++ E G L +L
Sbjct: 57 VREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYSLDLA 114
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+++ A ++ L Y+ VHRDI N+ + S K+ +F L+
Sbjct: 115 SLILY---------AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 162
Query: 480 --------PATNDVMP------------KF----DVFAFGVVLLELL 502
A+ +P +F DV+ FGV + E+L
Sbjct: 163 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++E +E +++ +H ++VKL+GV +++ +++ E G L +L
Sbjct: 56 VREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYSLDLA 113
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+++ A ++ L Y+ VHRDI N+ + S K+ +F L+
Sbjct: 114 SLILY---------AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
Query: 480 --------PATNDVMP------------KF----DVFAFGVVLLELL 502
A+ +P +F DV+ FGV + E+L
Sbjct: 162 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 432 RVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
++A+ + L+ H H++ S++HRD++ +N+ +++ + K +F ++ +DV D
Sbjct: 140 KIAVSIVKALE--HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID 196
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++E +E +++ +H ++VKL+GV +++ +++ E G L +L
Sbjct: 54 VREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYSLDLA 111
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+++ A ++ L Y+ VHRDI N+ + S K+ +F L+
Sbjct: 112 SLILY---------AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 480 --------PATNDVMP------------KF----DVFAFGVVLLELL 502
A+ +P +F DV+ FGV + E+L
Sbjct: 160 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 363 DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
+V +EL+I+Q + H LV L D + + F+V + G L L V
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEE-DMFMVVDLLLGGDLRYHLQ---------QNV 110
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
F + +L + ++ L Y+ I+HRD++ +NI LD I +F++AA
Sbjct: 111 HFKEETVKLFIC-ELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAA 163
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++E +E +++ +H ++VKL+GV +++ +++ E G L +L
Sbjct: 54 VREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYSLDLA 111
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+++ A ++ L Y+ VHRDI N+ + S K+ +F L+
Sbjct: 112 SLILY---------AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 480 --------PATNDVMP------------KF----DVFAFGVVLLELL 502
A+ +P +F DV+ FGV + E+L
Sbjct: 160 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 26/96 (27%)
Query: 433 VALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND-------- 484
V + L+++H + ++HRDI+++NI L K+ +F A T +
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV 177
Query: 485 ---------------VMPKFDVFAFGVVLLELLSGK 505
PK D+++ G++ +E++ G+
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 26/96 (27%)
Query: 433 VALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND-------- 484
V + L+++H + ++HRDI+++NI L K+ +F A T +
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV 177
Query: 485 ---------------VMPKFDVFAFGVVLLELLSGK 505
PK D+++ G++ +E++ G+
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++E +E +++ +H ++VKL+GV +++ +++ E G L +L
Sbjct: 51 VREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYSLDLA 108
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+++ A ++ L Y+ VHRDI N+ + S K+ +F L+
Sbjct: 109 SLILY---------AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 156
Query: 480 --------PATNDVMP------------KF----DVFAFGVVLLELL 502
A+ +P +F DV+ FGV + E+L
Sbjct: 157 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 26/96 (27%)
Query: 433 VALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND-------- 484
V + L+++H + ++HRDI+++NI L K+ +F A T +
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177
Query: 485 ---------------VMPKFDVFAFGVVLLELLSGK 505
PK D+++ G++ +E++ G+
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 26/96 (27%)
Query: 433 VALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND-------- 484
V + L+++H + ++HRDI+++NI L K+ +F A T +
Sbjct: 122 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV 178
Query: 485 ---------------VMPKFDVFAFGVVLLELLSGK 505
PK D+++ G++ +E++ G+
Sbjct: 179 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 332 TMNLSEHY----SIGKSVY------RATIDGKVLAVKKIKE--DVT-------EELRILQ 372
T ++ + Y +IG Y R + G+ +A+KKI DV EL+IL+
Sbjct: 50 TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILK 109
Query: 373 RINHANLVKLMG-----VSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTW 427
H N++ + V + ++V + E+ L + +H LT
Sbjct: 110 HFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQP----------LTL 158
Query: 428 SQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL+YMH AQ ++HRD++ +N+ ++ + KI +F +A
Sbjct: 159 EHVRYFLYQLLRGLKYMHS-AQ--VIHRDLKPSNLLVNENCELKIGDFGMA 206
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 14/125 (11%)
Query: 354 VLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXX 413
+L K+ K ++E +L+ + H LV L S + + V +Y G L L
Sbjct: 76 ILKKKEEKHIMSERNVLLKNVKHPFLVGLH-FSFQTADKLYFVLDYINGGELFYHLQ--- 131
Query: 414 XXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIA 473
FL R A ++A+ L Y+H +IV+RD++ NI LDS+ +
Sbjct: 132 ------RERCFLEPRARFYAA-EIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLT 181
Query: 474 NFSLA 478
+F L
Sbjct: 182 DFGLC 186
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI + LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 28/93 (30%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPK-------- 488
V L Y+H ++HRDI++++I L + K+++F A + DV PK
Sbjct: 150 VLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKXLVGTP 205
Query: 489 ----------------FDVFAFGVVLLELLSGK 505
D+++ G++++E++ G+
Sbjct: 206 YWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 58 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 110
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G + L F R A V +Y+H
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGR---------FXEPHARFYAAQIVLT-FEYLH- 159
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + ++ +F A
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 22/141 (15%)
Query: 352 GKVLAVKKIKEDVTEELR-ILQRI-------NHANLVKLMGVSS------DSQGNRFLVY 397
G+ A+K++ + E+ R I+Q + H N+V+ +S D+ FL+
Sbjct: 53 GREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112
Query: 398 EYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDI 457
G L ++L L+ L++ +Q+MH +P I+HRD+
Sbjct: 113 TELCKGQLVEFLKKMESRGP-------LSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDL 164
Query: 458 RTNNIQLDSRFKAKIANFSLA 478
+ N+ L ++ K+ +F A
Sbjct: 165 KVENLLLSNQGTIKLCDFGSA 185
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G + L F R A V +Y+H
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGR---------FXEPHARFYAAQIVLT-FEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + ++ +F A
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G + L F R A + +Y+H
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGR---------FXEPHARFYAA-QIVLTFEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + ++ +F A
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 37/164 (22%)
Query: 365 TEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIF 424
TE+ Q NH LV L ++ F V EY G L H F
Sbjct: 101 TEKHVFEQASNHPFLVGLHSCFQ-TESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF 157
Query: 425 LTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPA--- 481
+S + +AL+ Y+HE I++RD++ +N+ LDS K+ ++ +
Sbjct: 158 --YSAEISLALN------YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206
Query: 482 ----------TNDVMPKF----------DVFAFGVVLLELLSGK 505
N + P+ D +A GV++ E+++G+
Sbjct: 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI + LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 41/165 (24%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG----NRFLVYEYAENGSLDKWLHPXXXXXXXXXXV 422
ELR+L+ + H N++ L+ V + ++ N + + L+ + +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
I+ Q LR GL+Y+H I+HRD++ +N+ ++ + KI + LA T
Sbjct: 131 IY----QILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR-HT 175
Query: 483 NDVMPKF----------------------DVFAFGVVLLELLSGK 505
+D M + D+++ G ++ ELL+G+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 80/205 (39%), Gaps = 54/205 (26%)
Query: 341 IGKSVY------RATIDGKVLAVKKIK-------EDV----TEELRILQRINHANLVKLM 383
IG+ Y R ++ A+K +K ED+ TE+ Q NH LV L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 384 GVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQY 443
++ F V EY G L H F +S + +AL+ Y
Sbjct: 88 SCFQ-TESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF--YSAEISLALN------Y 136
Query: 444 MHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPA-------------TNDVMPKF- 489
+HE I++RD++ +N+ LDS K+ ++ + N + P+
Sbjct: 137 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 193
Query: 490 ---------DVFAFGVVLLELLSGK 505
D +A GV++ E+++G+
Sbjct: 194 RGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 332 TMNLSEHY----SIGKSVY------RATIDGKVLAVKKIKE--DVT-------EELRILQ 372
T ++ + Y +IG Y R + G+ +A+KKI DV EL+IL+
Sbjct: 49 TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILK 108
Query: 373 RINHANLVKLMG-----VSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTW 427
H N++ + V + ++V + E+ L + +H LT
Sbjct: 109 HFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQP----------LTL 157
Query: 428 SQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ GL+YMH AQ ++HRD++ +N+ ++ + KI +F +A
Sbjct: 158 EHVRYFLYQLLRGLKYMHS-AQ--VIHRDLKPSNLLVNENCELKIGDFGMA 205
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 28/148 (18%)
Query: 352 GKVLAVKKI-------KEDVTE-ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENG 403
GK+ AVK I KE E E+ +L++I H N+V L + +S + +LV + G
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDI-YESPNHLYLVMQLVSGG 105
Query: 404 SL-DKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNI 462
L D+ + F T + V + + Y+H + IVHRD++ N+
Sbjct: 106 ELFDRIVEKG-----------FYTEKDASTLIRQVLDAVYYLH---RMGIVHRDLKPENL 151
Query: 463 ---QLDSRFKAKIANFSLAA-PATNDVM 486
D K I++F L+ DVM
Sbjct: 152 LYYSQDEESKIMISDFGLSKMEGKGDVM 179
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 58 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 110
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G + + H F A + +Y+H
Sbjct: 111 FKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH- 159
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + ++ +F A
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATN 483
++ GL Y+H + +HRDI+ N+ L + K+A+F +A T+
Sbjct: 128 EILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD 172
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 35/177 (19%)
Query: 353 KVLAVK----KIKEDVTEELRILQRINHANLVKLMGV-SSDSQGNRFLVYEYAENGSLDK 407
KVL V+ + D EE L+ +H N++ ++G S + L+ + GSL
Sbjct: 39 KVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYN 98
Query: 408 WLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
LH + SQ ++ ALD A G ++H +P I + + ++ +D
Sbjct: 99 VLH--------EGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLIPRHALNSRSVXIDED 149
Query: 468 FKAKIA----NFSLAAP----ATNDVMPK-------------FDVFAFGVVLLELLS 503
A+I+ FS +P A V P+ D ++F V+L EL++
Sbjct: 150 XTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVT 206
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 58 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 110
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G + + H F A + +Y+H
Sbjct: 111 FKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH- 159
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + ++ +F A
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 335 LSEHYSIGKSVYRATIDG-KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
L +H G +D KV+ +K+I+ + E+ RILQ +N LVKL S N
Sbjct: 52 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNL 109
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EY G + L F R A + +Y+H ++
Sbjct: 110 YMVMEYVPGGEMFSHLRRIGR---------FXEPHARFYAA-QIVLTFEYLH---SLDLI 156
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA 478
+RD++ N+ +D + ++ +F A
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFA 181
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G + + H F A + +Y+H
Sbjct: 110 FKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + ++ +F A
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G + + H F A + +Y+H
Sbjct: 110 FKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + ++ +F A
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 43 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 95
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G + + H F A + +Y+H
Sbjct: 96 FKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH- 144
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + ++ +F A
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 174
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G + + H F A + +Y+H
Sbjct: 110 FKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + ++ +F A
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 80/205 (39%), Gaps = 54/205 (26%)
Query: 341 IGKSVY------RATIDGKVLAVKKIK-------EDV----TEELRILQRINHANLVKLM 383
IG+ Y R ++ A+K +K ED+ TE+ Q NH LV L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 384 GVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQY 443
++ F V EY G L H F +S + +AL+ Y
Sbjct: 73 SCFQ-TESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF--YSAEISLALN------Y 121
Query: 444 MHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPA-------------TNDVMPKF- 489
+HE I++RD++ +N+ LDS K+ ++ + N + P+
Sbjct: 122 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 178
Query: 490 ---------DVFAFGVVLLELLSGK 505
D +A GV++ E+++G+
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 327 VIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLMGVS 386
V++ M HY++ + KV+ +K+I+ + E+ RILQ +N LVKL S
Sbjct: 57 VMLVKHMETGNHYAM-----KILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FS 109
Query: 387 SDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHE 446
N ++V EY G + + H F A + +Y+H
Sbjct: 110 FKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH- 158
Query: 447 HAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+++RD++ N+ +D + ++ +F A
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 80/205 (39%), Gaps = 54/205 (26%)
Query: 341 IGKSVY------RATIDGKVLAVKKIK-------EDV----TEELRILQRINHANLVKLM 383
IG+ Y R ++ A+K +K ED+ TE+ Q NH LV L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 384 GVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQY 443
++ F V EY G L H F +S + +AL+ Y
Sbjct: 77 SCFQ-TESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF--YSAEISLALN------Y 125
Query: 444 MHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPA-------------TNDVMPKF- 489
+HE I++RD++ +N+ LDS K+ ++ + N + P+
Sbjct: 126 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 182
Query: 490 ---------DVFAFGVVLLELLSGK 505
D +A GV++ E+++G+
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 436 DVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATN 483
++ GL Y+H + +HRDI+ N+ L + K+A+F +A T+
Sbjct: 124 EILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD 168
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 35/172 (20%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 133
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 134 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA-----------------APA---TNDVMPKFDVFAFGVVLLELLSG 504
+F A APA + D +A GV++ E+ +G
Sbjct: 183 TDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++E +E +++ +H ++VKL+GV +++ +++ E G L +L
Sbjct: 54 VREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKFSLDLA 111
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+++ A ++ L Y+ VHRDI N+ + + K+ +F L+
Sbjct: 112 SLILY---------AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR 159
Query: 480 --------PATNDVMP------------KF----DVFAFGVVLLELL 502
A+ +P +F DV+ FGV + E+L
Sbjct: 160 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + L
Sbjct: 99 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRI 156
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F R A V +Y+H +++RD++ N+ +D + ++
Sbjct: 157 GR---------FXEPHARFYAAQIVLT-FEYLH---SLDLIYRDLKPENLLIDQQGYIQV 203
Query: 473 ANFSLA 478
+F A
Sbjct: 204 TDFGFA 209
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 30/152 (19%)
Query: 349 TIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQG-----NRF 394
T+ G +AVKK+ + EL +L+ +NH N++ L+ V + + + +
Sbjct: 44 TVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVY 103
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
LV E + +L + +H + L + + + G++++H I+H
Sbjct: 104 LVMELM-DANLCQVIH------------MELDHERMSYLLYQMLCGIKHLH---SAGIIH 147
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A+ + M
Sbjct: 148 RDLKPSNIVVKSDCTLKILDFGLARTASTNFM 179
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + L
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F R A V +Y+H +++RD++ N+ +D + ++
Sbjct: 136 GR---------FXEPHARFYAAQIVLT-FEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++E +E +++ +H ++VKL+GV +++ +++ E G L +L
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKFSLDLA 491
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+++ A ++ L Y+ VHRDI N+ + S K+ +F L+
Sbjct: 492 SLILY---------AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
Query: 480 --------PATNDVMP------------KF----DVFAFGVVLLELL 502
A+ +P +F DV+ FGV + E+L
Sbjct: 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 335 LSEHYSIGKSVYRATIDG-KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
L +H G +D KV+ +K+I+ + E+ RILQ +N LVKL S N
Sbjct: 60 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNL 117
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EY G + + H F A + +Y+H ++
Sbjct: 118 YMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLI 164
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA 478
+RD++ N+ +D + ++ +F A
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 335 LSEHYSIGKSVYRATIDG-KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
L +H G +D KV+ +K+I+ + E+ RILQ +N LVKL S N
Sbjct: 60 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNL 117
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EY G + + H F A + +Y+H ++
Sbjct: 118 YMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLI 164
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA 478
+RD++ N+ +D + ++ +F A
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 18/134 (13%)
Query: 340 SIGKSVYRATIDGKVLAVKKIKEDV---TEELRILQRINHANLVKLMGV---SSDSQGNR 393
S G ++ +A+KK+ +D EL+I++ + H N+V L + D +
Sbjct: 52 SFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111
Query: 394 FL--VYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPS 451
FL V EY H +I L Q LR L Y+H
Sbjct: 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR-------SLAYIHSIG--- 161
Query: 452 IVHRDIRTNNIQLD 465
I HRDI+ N+ LD
Sbjct: 162 ICHRDIKPQNLLLD 175
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 83/207 (40%), Gaps = 39/207 (18%)
Query: 324 EIEVIMESTMNLSEHYSIGKSVYRATIDGKVLAVKKIKEDVTEELRILQRINHANLVKLM 383
E +ME + + S+ +V +D + ++ E+ E ++ +H N+++L+
Sbjct: 46 EFGSVMEGNLKQEDGTSLKVAVKTMKLDN---SSQREIEEFLSEAACMKDFSHPNVIRLL 102
Query: 384 GVSSD--SQG--NRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVAN 439
GV + SQG ++ + + G LH + L+ +D+A
Sbjct: 103 GVCIEMSSQGIPKPMVILPFMKYGD----LHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 440 GLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPA-TNDV--------MP--- 487
G++Y+ + + +HRD+ N L +A+F L+ + D MP
Sbjct: 159 GMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 488 -------------KFDVFAFGVVLLEL 501
K DV+AFGV + E+
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 335 LSEHYSIGKSVYRATIDG-KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
L +H G +D KV+ +K+I+ + E+ RILQ +N LVKL S N
Sbjct: 52 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNL 109
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EY G + + H F A + +Y+H ++
Sbjct: 110 YMVMEYVPGGEM--FSHLRRIGRFSEPHARF--------YAAQIVLTFEYLH---SLDLI 156
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA 478
+RD++ N+ +D + ++ +F A
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFA 181
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 335 LSEHYSIGKSVYRATIDG-KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
L +H G +D KV+ +K+I+ + E+ RILQ +N LVKL S N
Sbjct: 80 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNL 137
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EY G + + H F A + +Y+H ++
Sbjct: 138 YMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLI 184
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA 478
+RD++ N+ +D + ++ +F A
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFA 209
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 335 LSEHYSIGKSVYRATIDG-KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
L +H G +D KV+ +K+I+ + E+ RILQ +N LVKL S N
Sbjct: 60 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNL 117
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EY G + + H F A + +Y+H ++
Sbjct: 118 YMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLI 164
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA 478
+RD++ N+ +D + ++ +F A
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 16/145 (11%)
Query: 335 LSEHYSIGKSVYRATIDG-KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
L +H G +D KV+ +K+I+ + E+ RILQ +N LVKL D+ N
Sbjct: 59 LVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEYSFKDN-SNL 116
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EY G + + H F A + +Y+H ++
Sbjct: 117 YMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLI 163
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA 478
+RD++ N+ +D + ++ +F A
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 16/145 (11%)
Query: 335 LSEHYSIGKSVYRATIDG-KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
L +H G +D KV+ +K+I+ + E+ RILQ +N LVKL D+ N
Sbjct: 59 LVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLEYSFKDN-SNL 116
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EY G + + H F A + +Y+H ++
Sbjct: 117 YMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLI 163
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA 478
+RD++ N+ +D + ++ +F A
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 335 LSEHYSIGKSVYRATIDG-KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNR 393
L +H G +D KV+ +K+I+ + E+ RILQ +N LVKL S N
Sbjct: 59 LVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-YSFKDNSNL 116
Query: 394 FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIV 453
++V EY G + + H F A + +Y+H ++
Sbjct: 117 YMVMEYVPGGEM--FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLI 163
Query: 454 HRDIRTNNIQLDSRFKAKIANFSLA 478
+RD++ N+ +D + ++ +F A
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 353 KVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENG 403
+ +AVK +KE T EL+IL I +H N+V L+G + G ++ EY + G
Sbjct: 58 RTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYG 117
Query: 404 SLDKWL 409
+L +L
Sbjct: 118 NLSNYL 123
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 21/125 (16%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQG-----NRFLVYEYAENGSLDKWLHPXXXXXXXXXX 421
EL +L+ +NH N++ L+ V + + + +LV E + +L + +H
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIH----------- 120
Query: 422 VIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPA 481
+ L + + + G++++H I+HRD++ +NI + S KI +F LA A
Sbjct: 121 -MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 482 TNDVM 486
+ M
Sbjct: 177 CTNFM 181
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + L
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F R A V +Y+H +++RD++ N+ +D + ++
Sbjct: 136 GR---------FXEPHARFYAAQIVLT-FEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + L
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F R A V +Y+H +++RD++ N+ +D + ++
Sbjct: 136 GR---------FXEPHARFYAAQIVLT-FEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + L
Sbjct: 73 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRI 130
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F R A + +Y+H +++RD++ N+ +D + ++
Sbjct: 131 GR---------FXEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 177
Query: 473 ANFSLA 478
+F A
Sbjct: 178 TDFGFA 183
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + L
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F R A V +Y+H +++RD++ N+ +D + ++
Sbjct: 136 GR---------FAEPHARFYAAQIVLT-FEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 99 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 154
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 155 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 203
Query: 473 ANFSLA 478
+F A
Sbjct: 204 TDFGFA 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 76/172 (44%), Gaps = 25/172 (14%)
Query: 334 NLSEHYSIGKSVY------RATIDGKVLAVKKIKEDVT--EELRIL-------QRINHAN 378
+L +G+ Y R G+++AVK+I+ V E+ R+L + ++
Sbjct: 52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPF 111
Query: 379 LVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVA 438
V G +G+ ++ E + SLDK+ I ++A+ +
Sbjct: 112 TVTFYGALF-REGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILG------KIAVSIV 163
Query: 439 NGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L+ H H++ S++HRD++ +N+ +++ + K+ +F ++ + V D
Sbjct: 164 KALE--HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID 213
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 35/172 (20%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 133
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 134 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA---------------APATNDVMPK-----FDVFAFGVVLLELLSG 504
+F A A A ++ K D +A GV++ E+ +G
Sbjct: 183 TDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 29/112 (25%)
Query: 363 DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXX 421
+V E+ IL+++NH ++K+ D++ + ++V E E G L DK
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFF-DAE-DYYIVLELMEGGELFDK-------------- 104
Query: 422 VIFLTWSQRLRVA------LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
+ ++RL+ A + +QY+HE+ I+HRD++ N+ L S+
Sbjct: 105 ---VVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 150
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 133
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 134 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 29/112 (25%)
Query: 363 DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXX 421
+V E+ IL+++NH ++K+ D++ + ++V E E G L DK
Sbjct: 67 NVETEIEILKKLNHPCIIKIKNFF-DAE-DYYIVLELMEGGELFDK-------------- 110
Query: 422 VIFLTWSQRLRVA------LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
+ ++RL+ A + +QY+HE+ I+HRD++ N+ L S+
Sbjct: 111 ---VVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 156
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 29/112 (25%)
Query: 363 DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXX 421
+V E+ IL+++NH ++K+ D++ + ++V E E G L DK
Sbjct: 60 NVETEIEILKKLNHPCIIKIKNFF-DAE-DYYIVLELMEGGELFDK-------------- 103
Query: 422 VIFLTWSQRLRVA------LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
+ ++RL+ A + +QY+HE+ I+HRD++ N+ L S+
Sbjct: 104 ---VVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 149
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 133
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 134 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 29/112 (25%)
Query: 363 DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXX 421
+V E+ IL+++NH ++K+ D++ + ++V E E G L DK
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFF-DAE-DYYIVLELMEGGELFDK-------------- 104
Query: 422 VIFLTWSQRLRVA------LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
+ ++RL+ A + +QY+HE+ I+HRD++ N+ L S+
Sbjct: 105 ---VVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 150
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 133
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 134 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 79 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 134
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 135 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 183
Query: 473 ANFSLA 478
+F A
Sbjct: 184 TDFGFA 189
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 29/112 (25%)
Query: 363 DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXX 421
+V E+ IL+++NH ++K+ D++ + ++V E E G L DK
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFF-DAE-DYYIVLELMEGGELFDK-------------- 104
Query: 422 VIFLTWSQRLRVA------LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
+ ++RL+ A + +QY+HE+ I+HRD++ N+ L S+
Sbjct: 105 ---VVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 150
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 133
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 134 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 133
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 134 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 65 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 120
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 121 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQV 169
Query: 473 ANFSLA 478
+F A
Sbjct: 170 TDFGFA 175
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 133
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 134 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 133
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 134 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 24/151 (15%)
Query: 338 HYSIGKSVYRATIDGKVLAVKKIKEDV----TEELRILQRIN-HANLVKLMGVSSDSQGN 392
H + G VYR D + +AVK+I + E+++L+ + H N+++ D Q
Sbjct: 34 HGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQ-F 92
Query: 393 RFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSI 452
+++ E +L +++ + L + +GL ++H +I
Sbjct: 93 QYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQT---------TSGLAHLH---SLNI 139
Query: 453 VHRDIRTNNIQLD-----SRFKAKIANFSLA 478
VHRD++ +NI + + KA I++F L
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLC 170
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 133
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 134 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/96 (19%), Positives = 42/96 (43%), Gaps = 26/96 (27%)
Query: 433 VALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND-------- 484
V + L+++H + ++HR+I+++NI L K+ +F A T +
Sbjct: 122 VCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 178
Query: 485 ---------------VMPKFDVFAFGVVLLELLSGK 505
PK D+++ G++ +E++ G+
Sbjct: 179 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 353 KVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPX 412
KV+ +K+I+ + E+ RILQ +N LVKL S N ++V EY G + + H
Sbjct: 78 KVVKLKQIEHTLNEK-RILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLR 133
Query: 413 XXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKI 472
F A + +Y+H +++RD++ N+ +D + ++
Sbjct: 134 RIGRFSEPHARFY--------AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQV 182
Query: 473 ANFSLA 478
+F A
Sbjct: 183 TDFGFA 188
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 197
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 181
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 181
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 177
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 179
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 179
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 197
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 141 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 185
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 177
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 175
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 139 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 183
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 130 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 174
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 175
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 42 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEE 100
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 101 FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ--------MLXGIKHLHSAG---IIH 149
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLARTAGTSFM 181
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 80/200 (40%), Gaps = 44/200 (22%)
Query: 340 SIGKSVYRATIDGKVLAVKKIKEDVTE--------ELRILQRINHANLVKLMGVSSDSQG 391
S+ K V++ + G+++AVK+I+ V E +L ++ R + + + +G
Sbjct: 37 SVNKMVHKPS--GQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG 94
Query: 392 NRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPS 451
+ ++ E S DK+ L ++ L L ++ E+ +
Sbjct: 95 DCWICMELMST-SFDKFYKYVYSVLDDVIPEEILG-----KITLATVKALNHLKENLK-- 146
Query: 452 IVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMP------------------------ 487
I+HRDI+ +NI LD K+ +F ++ + +
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGY 206
Query: 488 --KFDVFAFGVVLLELLSGK 505
+ DV++ G+ L EL +G+
Sbjct: 207 DVRSDVWSLGITLYELATGR 226
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 360 IKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXX 419
++E +E +++ +H ++VKL+GV +++ +++ E G L +L
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKFSLDLA 491
Query: 420 XXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAA 479
+++ A ++ L Y+ VHRDI N+ + + K+ +F L+
Sbjct: 492 SLILY---------AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR 539
Query: 480 --------PATNDVMP------------KF----DVFAFGVVLLELL 502
A+ +P +F DV+ FGV + E+L
Sbjct: 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 29/112 (25%)
Query: 363 DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXX 421
+V E+ IL+++NH ++K+ D++ + ++V E E G L DK
Sbjct: 200 NVETEIEILKKLNHPCIIKIKNFF-DAE-DYYIVLELMEGGELFDK-------------- 243
Query: 422 VIFLTWSQRLRVA------LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
+ ++RL+ A + +QY+HE+ I+HRD++ N+ L S+
Sbjct: 244 ---VVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 289
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 29/112 (25%)
Query: 363 DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DKWLHPXXXXXXXXXX 421
+V E+ IL+++NH ++K+ D++ + ++V E E G L DK
Sbjct: 186 NVETEIEILKKLNHPCIIKIKNFF-DAE-DYYIVLELMEGGELFDK-------------- 229
Query: 422 VIFLTWSQRLRVA------LDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSR 467
+ ++RL+ A + +QY+HE+ I+HRD++ N+ L S+
Sbjct: 230 ---VVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 275
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPD 177
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 78/190 (41%), Gaps = 45/190 (23%)
Query: 311 PGVSGYLGKPIVYEIEVIMESTMNLSEHYS----IGKSVYRAT------IDGKVLAVKKI 360
PGV G E+E++ ++ Y+ IG+ Y + +A+KKI
Sbjct: 25 PGVPG--------EVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKI 76
Query: 361 K--------EDVTEELRILQRINHANLVKLMGV----SSDSQGNRFLVYEYAENGSLDKW 408
+ E++IL R H N++ + + + ++ + ++V + E L K
Sbjct: 77 SPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET-DLYKL 135
Query: 409 LHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF 468
L ++ + GL+Y+H +++HRD++ +N+ +++
Sbjct: 136 LKSQQLSNDHICYFLY-----------QILRGLKYIH---SANVLHRDLKPSNLLINTTC 181
Query: 469 KAKIANFSLA 478
KI +F LA
Sbjct: 182 DLKICDFGLA 191
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 42 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEE 100
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 101 FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ--------MLCGIKHLHS---AGIIH 149
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLARTAGTSFM 181
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPAT 482
IFLT + ++ G +++HE I+HRD++ N L+ KI +F LA
Sbjct: 126 IFLTEQHVKTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTIN 182
Query: 483 ND 484
+D
Sbjct: 183 SD 184
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND 484
+ GL+Y+H +++HRD++ +N+ L++ KI +F LA A D
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPD 179
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 85/220 (38%), Gaps = 63/220 (28%)
Query: 334 NLSEHYSIGKSV----------YRATIDGKVLAVKKIK-------------EDVTEELRI 370
++ +HY +G+ + R GK A K IK E++ E+ I
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 371 LQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQR 430
L+ I H N++ L + +++ + L+ E G L +L LT +
Sbjct: 69 LREIRHPNIITLHDI-FENKTDVVLILELVSGGELFDFLAEKES----------LTEDEA 117
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFSLA-------- 478
+ + +G+ Y+H I H D++ NI L + + K+ +F +A
Sbjct: 118 TQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 174
Query: 479 -----------APATNDVMP---KFDVFAFGVVLLELLSG 504
AP + P + D+++ GV+ LLSG
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 35 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 93
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 94 FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ--------MLXGIKHLHSAG---IIH 142
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 143 RDLKPSNIVVKSDXTLKILDFGLARTAGTSFM 174
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 42 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEE 100
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 101 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ--------MLCGIKHLHS---AGIIH 149
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLARTAGTSFM 181
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 31/157 (19%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQG--- 391
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 80 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138
Query: 392 --NRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQ 449
+ +LV E +D L + +L + + G++++H
Sbjct: 139 FQDVYLVMEL-----MDANLCQVIQMELDHERMSYLLYQ--------MLCGIKHLHSAG- 184
Query: 450 PSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
I+HRD++ +NI + S KI +F LA A M
Sbjct: 185 --IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 42 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 100
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 101 FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ--------MLXGIKHLHSAG---IIH 149
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLARTAGTSFM 181
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 30/137 (21%)
Query: 356 AVKKIK----EDV---TEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DK 407
A KKI EDV +E+ I++ ++H N+++L D+ + +LV E G L ++
Sbjct: 38 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT-DIYLVMELCTGGELFER 96
Query: 408 WLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQL--- 464
+H S R+ DV + + Y H+ ++ HRD++ N
Sbjct: 97 VVHKRVFRE-----------SDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTD 142
Query: 465 --DSRFKAKIANFSLAA 479
DS K+ +F LAA
Sbjct: 143 SPDSPL--KLIDFGLAA 157
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 63/160 (39%), Gaps = 33/160 (20%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 133 YQMLV--------GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM 181
Query: 487 ----------------------PKFDVFAFGVVLLELLSG 504
D+++ GV++ E++ G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 30/137 (21%)
Query: 356 AVKKIK----EDV---TEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSL-DK 407
A KKI EDV +E+ I++ ++H N+++L D+ + +LV E G L ++
Sbjct: 55 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT-DIYLVMELCTGGELFER 113
Query: 408 WLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQL--- 464
+H S R+ DV + + Y H+ ++ HRD++ N
Sbjct: 114 VVHKRVFRE-----------SDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTD 159
Query: 465 --DSRFKAKIANFSLAA 479
DS K+ +F LAA
Sbjct: 160 SPDSPL--KLIDFGLAA 174
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 70/170 (41%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+E++ E+ IL+ I H N++ L + +++ + L+ E G L +L
Sbjct: 52 REEIEREVNILREIRHPNIITLHDI-FENKTDVVLILELVSGGELFDFLAEKES------ 104
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + + +G+ Y+H I H D++ NI L + + K+ +F
Sbjct: 105 ----LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
+A AP + P + D+++ GV+ LLSG
Sbjct: 158 IAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 353 KVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENG 403
+ +AVK +KE T EL+IL I +H N+V L+G + G ++ E+ + G
Sbjct: 53 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112
Query: 404 SLDKWL 409
+L +L
Sbjct: 113 NLSTYL 118
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 70/170 (41%), Gaps = 40/170 (23%)
Query: 361 KEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXX 420
+E++ E+ IL+ I H N++ L + +++ + L+ E G L +L
Sbjct: 73 REEIEREVNILREIRHPNIITLHDI-FENKTDVVLILELVSGGELFDFLAEKES------ 125
Query: 421 XVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF----KAKIANFS 476
LT + + + +G+ Y+H I H D++ NI L + + K+ +F
Sbjct: 126 ----LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 178
Query: 477 LA-------------------APATNDVMP---KFDVFAFGVVLLELLSG 504
+A AP + P + D+++ GV+ LLSG
Sbjct: 179 IAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 353 KVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENG 403
+ +AVK +KE T EL+IL I +H N+V L+G + G ++ E+ + G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 404 SLDKWL 409
+L +L
Sbjct: 120 NLSTYL 125
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 353 KVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENG 403
+ +AVK +KE T EL+IL I +H N+V L+G + G ++ E+ + G
Sbjct: 51 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 110
Query: 404 SLDKWL 409
+L +L
Sbjct: 111 NLSTYL 116
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 353 KVLAVKKIKEDVTE--------ELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENG 403
+ +AVK +KE T EL+IL I +H N+V L+G + G ++ E+ + G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 404 SLDKWL 409
+L +L
Sbjct: 118 NLSTYL 123
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 80 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 139 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ--------MLCGIKHLHSAG---IIH 187
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 188 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 63/160 (39%), Gaps = 33/160 (20%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 133 YQMLV--------GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM 181
Query: 487 ----------------------PKFDVFAFGVVLLELLSG 504
D+++ GV++ E++ G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 35 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 93
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 94 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ--------MLCGIKHLHSAG---IIH 142
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 143 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 174
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 43 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 101
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 102 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ--------MLCGIKHLHSAG---IIH 150
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 151 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 182
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 36 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 94
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 95 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ--------MLCGIKHLHSAG---IIH 143
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 144 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 175
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 42 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 100
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 101 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ--------MLCGIKHLHSAG---IIH 149
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 36 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 94
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 95 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ--------MLCGIKHLHSAG---IIH 143
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 144 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 175
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 41 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 99
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 100 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ--------MLCGIKHLHSAG---IIH 148
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 149 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 180
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 43 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 101
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 102 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ--------MLCGIKHLHSAG---IIH 150
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 151 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 182
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 21/152 (13%)
Query: 344 SVYRATIDGKVLAVKKIK---------EDVTEELRILQRINHANLVKLMGVSSDSQGNRF 394
+ Y A +D V A+KK+ + EL +++ +NH N++ L+ V + +
Sbjct: 42 AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 100
Query: 395 LVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVH 454
Y +D L + +L + + G++++H I+H
Sbjct: 101 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ--------MLCGIKHLHSAG---IIH 149
Query: 455 RDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
RD++ +NI + S KI +F LA A M
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 67/160 (41%), Gaps = 33/160 (20%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPA----- 481
+ + G++++H I+HRD++ +NI + S KI +F LA A
Sbjct: 133 YQ--------MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181
Query: 482 -TNDVMPKF----------------DVFAFGVVLLELLSG 504
T +V+ ++ D+++ G ++ E++ G
Sbjct: 182 MTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 67 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL 126
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 127 YQ--------MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 175
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 78 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL 137
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 138 YQ--------MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 186
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 20/149 (13%)
Query: 343 KSVYRATIDGK---VLAVKKIKEDVTEELRILQRINHANLVKLMGV----SSDSQGNRFL 395
K V+ DG+ +L+ + + V E+R+L +H N++ L + + +L
Sbjct: 52 KRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYL 111
Query: 396 VYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHR 455
V E L + +H F+ + GL +HE +VHR
Sbjct: 112 VTELMRT-DLAQVIHDQRIVISPQHIQYFM---------YHILLGLHVLHE---AGVVHR 158
Query: 456 DIRTNNIQLDSRFKAKIANFSLAAPATND 484
D+ NI L I +F+LA T D
Sbjct: 159 DLHPGNILLADNNDITICDFNLAREDTAD 187
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 20/149 (13%)
Query: 343 KSVYRATIDGK---VLAVKKIKEDVTEELRILQRINHANLVKLMGV----SSDSQGNRFL 395
K V+ DG+ +L+ + + V E+R+L +H N++ L + + +L
Sbjct: 52 KRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYL 111
Query: 396 VYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHR 455
V E L + +H F+ + GL +HE +VHR
Sbjct: 112 VTELMRT-DLAQVIHDQRIVISPQHIQYFM---------YHILLGLHVLHE---AGVVHR 158
Query: 456 DIRTNNIQLDSRFKAKIANFSLAAPATND 484
D+ NI L I +F+LA T D
Sbjct: 159 DLHPGNILLADNNDITICDFNLAREDTAD 187
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL 133
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 134 YQ--------MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 182
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 133 YQ--------MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 133 YQMLV--------GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM 181
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 30/173 (17%)
Query: 345 VYRATIDG--KVLAVKKIKEDVTE-----ELRILQRINHANLVKLMGVSSDSQGNRFLVY 397
VYR G K A+K +K+ V + E+ +L R++H N++KL + ++ LV
Sbjct: 69 VYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEI-FETPTEISLVL 127
Query: 398 EYAENGSL-DKWLHPXXXXXXXXXXVIFLTWSQR--LRVALDVANGLQYMHEHAQPSIVH 454
E G L D+ + +S+R + + Y+HE+ IVH
Sbjct: 128 ELVTGGELFDRIVEKGY-------------YSERDAADAVKQILEAVAYLHENG---IVH 171
Query: 455 RDIRTNNIQLDS---RFKAKIANFSLAAPATNDVMPKFDVFAFGVVLLELLSG 504
RD++ N+ + KIA+F L+ + V+ K G E+L G
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRG 224
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 133 YQ--------MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 133 YQ--------MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 133 YQ--------MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL 134
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 135 YQ--------MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 183
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 133 YQ--------MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 133 YQ--------MLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM 181
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 367 ELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLT 426
EL +++ +NH N++ L+ V + + Y +D L + +L
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 427 WSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVM 486
+ + G++++H I+HRD++ +NI + S KI +F LA A M
Sbjct: 133 YQ--------MLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM 181
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 73/207 (35%), Gaps = 64/207 (30%)
Query: 350 IDGKVLAVKKIK--------EDVTEELRILQRINHANLVKLMG------VSSDSQGNRFL 395
+D A+K+I+ E V E++ L ++ H +V+ + Q +
Sbjct: 28 VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPK 87
Query: 396 VYEYAE-----NGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQP 450
VY Y + +L W++ V L + L +A ++++H
Sbjct: 88 VYLYIQMQLCRKENLKDWMNGRCTIEERERSVC-------LHIFLQIAEAVEFLHSKG-- 138
Query: 451 SIVHRDIRTNNIQLDSRFKAKIANFSLAAPATND--------VMP--------------- 487
++HRD++ +NI K+ +F L D MP
Sbjct: 139 -LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYM 197
Query: 488 ------------KFDVFAFGVVLLELL 502
K D+F+ G++L ELL
Sbjct: 198 SPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 423 IFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
IFLT + ++ G ++HE I+HRD++ N L+ K+ +F LA
Sbjct: 124 IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/174 (17%), Positives = 68/174 (39%), Gaps = 43/174 (24%)
Query: 355 LAVKKIKE--------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+A+K+++E ++ +E ++ +++ ++ +L+G+ S L+ + G L
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLL 108
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
++ L W + +A G+ Y+ + +VHRD+ N+ + +
Sbjct: 109 DYVREHKDNIGSQY---LLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKT 156
Query: 467 RFKAKIANFSLAAPATNDVMPKFDVFAFGVVLLELLSGKKATRTTENGKTAVLW 520
KI +F LA +LL ++ E GK + W
Sbjct: 157 PQHVKITDFGLA---------------------KLLGAEEKEYHAEGGKVPIKW 189
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/174 (17%), Positives = 68/174 (39%), Gaps = 43/174 (24%)
Query: 355 LAVKKIKE--------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+A+K+++E ++ +E ++ +++ ++ +L+G+ S L+ + G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLL 107
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
++ L W + +A G+ Y+ + +VHRD+ N+ + +
Sbjct: 108 DYVREHKDNIGSQY---LLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKT 155
Query: 467 RFKAKIANFSLAAPATNDVMPKFDVFAFGVVLLELLSGKKATRTTENGKTAVLW 520
KI +F LA +LL ++ E GK + W
Sbjct: 156 PQHVKITDFGLA---------------------KLLGAEEKEYHAEGGKVPIKW 188
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 145 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 189
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 190 ---------KLLGAEEKEYHAEGGKVPIKW 210
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/174 (17%), Positives = 68/174 (39%), Gaps = 43/174 (24%)
Query: 355 LAVKKIKE--------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+A+K+++E ++ +E ++ +++ ++ +L+G+ S L+ + G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLL 111
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
++ L W + +A G+ Y+ + +VHRD+ N+ + +
Sbjct: 112 DYVREHKDNIGSQY---LLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKT 159
Query: 467 RFKAKIANFSLAAPATNDVMPKFDVFAFGVVLLELLSGKKATRTTENGKTAVLW 520
KI +F LA +LL ++ E GK + W
Sbjct: 160 PQHVKITDFGLA---------------------KLLGAEEKEYHAEGGKVPIKW 192
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 41/175 (23%)
Query: 358 KKIKEDVTEELRILQRI-NHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHPXXXXX 416
K+++ + +E+ L+ H N+VKL V D Q + FLV E G L + +
Sbjct: 46 KRMEANTQKEITALKLCEGHPNIVKLHEVFHD-QLHTFLVMELLNGGELFERIKKKKH-- 102
Query: 417 XXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQL---DSRFKAKIA 473
+ ++ + + + + +MH+ +VHRD++ N+ + + KI
Sbjct: 103 --------FSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKII 151
Query: 474 NFSLA--APATNDVM--PKF-------------------DVFAFGVVLLELLSGK 505
+F A P N + P F D+++ GV+L +LSG+
Sbjct: 152 DFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/174 (17%), Positives = 68/174 (39%), Gaps = 43/174 (24%)
Query: 355 LAVKKIKE--------DVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLD 406
+A+K+++E ++ +E ++ +++ ++ +L+G+ S L+ + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLL 104
Query: 407 KWLHPXXXXXXXXXXVIFLTWSQRLRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDS 466
++ L W + +A G+ Y+ + +VHRD+ N+ + +
Sbjct: 105 DYVREHKDNIGSQY---LLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKT 152
Query: 467 RFKAKIANFSLAAPATNDVMPKFDVFAFGVVLLELLSGKKATRTTENGKTAVLW 520
KI +F LA +LL ++ E GK + W
Sbjct: 153 PQHVKITDFGLA---------------------KLLGAEEKEYHAEGGKVPIKW 185
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 166
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 167 ---------KLLGAEEKEYHAEGGKVPIKW 187
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 166
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 167 ---------KLLGAEEKEYHAEGGKVPIKW 187
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 121 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 165
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 166 ---------KLLGAEEKEYHAEGGKVPIKW 186
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 167
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 168 ---------KLLGAEEKEYHAEGGKVPIKW 188
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 171
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 172 ---------KLLGAEEKEYHAEGGKVPIKW 192
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 164
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 165 ---------KLLGAEEKEYHAEGGKVPIKW 185
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 121 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 165
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 166 ---------KLLGAEEKEYHAEGGKVPIKW 186
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 164
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 165 ---------KLLGAEEKEYHAEGGKVPIKW 185
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 167
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 168 ---------KLLGAEEKEYHAEGGKVPIKW 188
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 167
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 168 ---------KLLGAEEKEYHAEGGKVPIKW 188
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 171
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 172 ---------KLLGAEEKEYHAEGGKVPIKW 192
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 164
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 165 ---------KLLGAEEKEYHAEGGKVPIKW 185
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 24/87 (27%)
Query: 434 ALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFDVFA 493
+ +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 157 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA--------------- 198
Query: 494 FGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 199 ------KLLGAEEKEYHAEGGKVPIKW 219
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 117 LNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 161
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 162 ---------KLLGAEEKEYHAEGGKVPIKW 182
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 130 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 174
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 175 ---------KLLGAEEKEYHAEGGKVPIKW 195
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 164
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 165 ---------KLLGAEEKEYHAEGGKVPIKW 185
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 126 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 170
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 171 ---------KLLGAEEKEYHAEGGKVPIKW 191
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 431 LRVALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLAAPATNDVMPKFD 490
L + +A G+ Y+ + +VHRD+ N+ + + KI +F LA
Sbjct: 114 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA------------ 158
Query: 491 VFAFGVVLLELLSGKKATRTTENGKTAVLW 520
+LL ++ E GK + W
Sbjct: 159 ---------KLLGAEEKEYHAEGGKVPIKW 179
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 434 ALDVANGLQYMHEHAQPSIVHRDIRTNNIQLDSRFKAKIANFSLA 478
+ +A G+ Y+ + +VHRD+ N+ + S KI +F LA
Sbjct: 125 CMQIAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 20/149 (13%)
Query: 352 GKVLAVKKIKEDVTEELRILQRINHANLVKLMGVSSDSQGNRFLVYEYAENGSLDKWLHP 411
GKV V+KI T +L ++ + A +V+ + ++ R V E+ LH
Sbjct: 68 GKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER-QVLEHIRQSPFLVTLHY 126
Query: 412 XXXXXXXXXXVI--------FLTWSQRLRVAL--------DVANGLQYMHEHAQPSIVHR 455
++ F SQR R ++ L+++H + I++R
Sbjct: 127 AFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYR 183
Query: 456 DIRTNNIQLDSRFKAKIANFSLAAPATND 484
DI+ NI LDS + +F L+ D
Sbjct: 184 DIKLENILLDSNGHVVLTDFGLSKEFVAD 212
>pdb|3EFC|A Chain A, Crystal Structure Of Yaet Periplasmic Domain
Length = 395
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 11/68 (16%)
Query: 107 ITYQIKKGDSYYLVSITSFENLTNWHAVLEMNPGINPNLLQIGVKVTFPLFCKCPSKTNM 166
+T I +GD Y L + NL A +E I P L G KV T M
Sbjct: 239 VTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKV-----------TKM 287
Query: 167 EDGIENLI 174
ED I+ L+
Sbjct: 288 EDDIKKLL 295
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 13/61 (21%)
Query: 336 SEHYSIGKSVYRATI----------DGKVLAVKKIKEDV---TEELRILQRINHANLVKL 382
S+ YS+GK++ + GK A+KK+ +D EL I++ ++H N++KL
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKL 65
Query: 383 M 383
+
Sbjct: 66 V 66
>pdb|2QCZ|A Chain A, Structure Of N-Terminal Domain Of E. Coli Yaet
pdb|2QCZ|B Chain B, Structure Of N-Terminal Domain Of E. Coli Yaet
pdb|2QDF|A Chain A, Structure Of N-Terminal Domain Of E. Coli Yaet
Length = 335
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 11/68 (16%)
Query: 107 ITYQIKKGDSYYLVSITSFENLTNWHAVLEMNPGINPNLLQIGVKVTFPLFCKCPSKTNM 166
+T I +GD Y L + NL A +E I P L G KV T M
Sbjct: 240 VTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKV-----------TKM 288
Query: 167 EDGIENLI 174
ED I+ L+
Sbjct: 289 EDDIKKLL 296
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 378 NLVKLMGVSSDSQGNR-FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
N+VKL+ + D L++EY N K L+P + +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYI------------YE 133
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF-KAKIANFSLA 478
+ L Y H I+HRD++ +N+ +D K ++ ++ LA
Sbjct: 134 LLKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 378 NLVKLMGVSSDSQGNR-FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
N+VKL+ + D L++EY N K L+P + +
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYI------------YE 135
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF-KAKIANFSLA 478
+ L Y H I+HRD++ +N+ +D K ++ ++ LA
Sbjct: 136 LLKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLA 175
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 378 NLVKLMGVSSDSQGNR-FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
N+VKL+ + D L++EY N K L+P + +
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYI------------YE 134
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF-KAKIANFSLA 478
+ L Y H I+HRD++ +N+ +D K ++ ++ LA
Sbjct: 135 LLKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLA 174
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 378 NLVKLMGVSSDSQGNR-FLVYEYAENGSLDKWLHPXXXXXXXXXXVIFLTWSQRLRVALD 436
N+VKL+ + D L++EY N K L+P + +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYI------------YE 133
Query: 437 VANGLQYMHEHAQPSIVHRDIRTNNIQLDSRF-KAKIANFSLA 478
+ L Y H I+HRD++ +N+ +D K ++ ++ LA
Sbjct: 134 LLKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,632,766
Number of Sequences: 62578
Number of extensions: 565139
Number of successful extensions: 3063
Number of sequences better than 100.0: 921
Number of HSP's better than 100.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 680
Number of HSP's that attempted gapping in prelim test: 1992
Number of HSP's gapped (non-prelim): 1226
length of query: 615
length of database: 14,973,337
effective HSP length: 105
effective length of query: 510
effective length of database: 8,402,647
effective search space: 4285349970
effective search space used: 4285349970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)