BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047630
(392 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94II3|PMTL_ARATH Probable methyltransferase PMT21 OS=Arabidopsis thaliana GN=ERD3
PE=2 SV=1
Length = 600
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 225 IDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFN-NFIASRGVVP 283
+ +++ K GTIR +D G GVA++ +++R I V+ + N F RG+
Sbjct: 181 MQDLIPEMKDGTIRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHEAQVQFALERGIPA 240
Query: 284 LYISIS-QRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWL 336
+ IS QRLPF N+ D+ H L W T + +++R+LRPGG FW+
Sbjct: 241 ILGIISTQRLPFPSNSFDMAHCSRCLIPW--TEFGGVYLLEVHRILRPGG-FWV 291
>sp|Q9ZPH9|PMTF_ARATH Probable methyltransferase PMT15 OS=Arabidopsis thaliana
GN=At4g00750 PE=1 SV=1
Length = 633
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 82/198 (41%), Gaps = 24/198 (12%)
Query: 144 RCRAVGPSHYIEPYPLPKSLWTTPPDSSLVWTAYTCKNYTCLINRKHTQKGFDDCKDCFD 203
RCR P Y P+ P+S + W A +T L K Q KD F
Sbjct: 138 RCRIPAPYGYSLPFRWPES-------RDVAWFANV--PHTELTVEKKNQNWVRYEKDRFL 188
Query: 204 LQGVEKIRWTQKKGNGGLDFSIDEV--LATKKPGTIRIGLDIGGGVATFAVRMMERNI-T 260
G + G D IDE+ L K G+IR +D G GVA+F +M RNI T
Sbjct: 189 FPGGGTM------FPRGADAYIDEIGRLINLKDGSIRTAIDTGCGVASFGAYLMSRNIVT 242
Query: 261 IVTTSMNLNGPFNNFIASRGVVPLYISI--SQRLPFFDNTLDIVHSMHVLSNWIPTTLLH 318
+ + + F RG VP I + S RLPF DI H L W +
Sbjct: 243 MSFAPRDTHEAQVQFALERG-VPAIIGVLASIRLPFPARAFDIAHCSRCLIPWGQYNGTY 301
Query: 319 FLMFDIYRVLRPGGLFWL 336
+ D RVLRPGG +W+
Sbjct: 302 LIEVD--RVLRPGG-YWI 316
Score = 35.8 bits (81), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 226 DEVLATKKPGTIRIGLDIGGGVATFAVRMME-----RNITIVTTSMNLNGPFNNFIASRG 280
D+ LA + G R LD+ + FA +++ N+ V S+N G I RG
Sbjct: 469 DQQLA--ETGRYRNFLDMNAHLGGFASALVDDPVWVMNVVPVEASVNTLG----VIYERG 522
Query: 281 VVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGG 332
++ Y + + + + T D +H+ V S + + ++ ++ R+LRP G
Sbjct: 523 LIGTYQNWCEAMSTYPRTYDFIHADSVFSLYKDRCDMEDILLEMDRILRPKG 574
>sp|Q9C6S7|PMTK_ARATH Probable methyltransferase PMT20 OS=Arabidopsis thaliana
GN=At1g31850 PE=1 SV=1
Length = 603
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 225 IDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFN-NFIASRGVVP 283
+ +++ K GT+R +D G GVA++ +++R I ++ + N F RG+
Sbjct: 187 MQDLIPEMKDGTVRTAIDTGCGVASWGGDLLDRGILSLSLAPRDNHEAQVQFALERGIPA 246
Query: 284 LYISIS-QRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWL 336
+ IS QRLPF N D+ H L W T + +I+R++RPGG FW+
Sbjct: 247 ILGIISTQRLPFPSNAFDMAHCSRCLIPW--TEFGGIYLLEIHRIVRPGG-FWV 297
>sp|B9DFI7|PMT2_ARATH Probable methyltransferase PMT2 OS=Arabidopsis thaliana
GN=At1g26850 PE=1 SV=2
Length = 616
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 110/283 (38%), Gaps = 36/283 (12%)
Query: 62 SEGDSASVPS-EFLAFTSGQNLPFGFNTNFDSDTIYPPVGRACTLFP-DELRRYMSYKVN 119
S D VPS F +G++ G + P GR P + RR M++
Sbjct: 52 SGADCNIVPSLNFETHHAGESSLVGASEAAKVKAFEPCDGRYTDYTPCQDQRRAMTF--- 108
Query: 120 ASCPDDELLAQKLLLKGCEPLPRR-RCRAVGPSHYIEPYPLPKSLWTTPPDSSLVWTAYT 178
P D ++ ++ + C P + C P Y+ P+ PKS P Y
Sbjct: 109 ---PRDSMIYRE---RHCAPENEKLHCLIPAPKGYVTPFSWPKSRDYVP---------YA 153
Query: 179 CKNYTCLINRKHTQKGFDDCKDCFDLQGVEKIRWTQKKGNGGLDFSIDEVLAT--KKPGT 236
Y L K Q D F G + G D ID++ + + GT
Sbjct: 154 NAPYKALTVEKAIQNWIQYEGDVFRFPG------GGTQFPQGADKYIDQLASVIPMENGT 207
Query: 237 IRIGLDIGGGVATFAVRMMERNITIVT-TSMNLNGPFNNFIASRGVVPLYISI--SQRLP 293
+R LD G GVA++ + RN+ ++ + + F RGV P I + + +LP
Sbjct: 208 VRTALDTGCGVASWGAYLWSRNVRAMSFAPRDSHEAQVQFALERGV-PAVIGVLGTIKLP 266
Query: 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWL 336
+ D+ H L W ++ + D RVLRPGG +W+
Sbjct: 267 YPTRAFDMAHCSRCLIPWGANDGMYLMEVD--RVLRPGG-YWI 306
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 235 GTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFN-NFIASRGVVPLYISISQRLP 293
G R +D+ G FA + + + ++ + + RG++ +Y +
Sbjct: 462 GRYRNIMDMNAGFGGFAAALESQKLWVMNVVPTIAEKNRLGVVYERGLIGIYHDWCEAFS 521
Query: 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGG 332
+ T D++H+ H+ S + ++ ++ R+LRP G
Sbjct: 522 TYPRTYDLIHANHLFSLYKNKCNADDILLEMDRILRPEG 560
>sp|Q9SZX8|PMTH_ARATH Probable methyltransferase PMT17 OS=Arabidopsis thaliana
GN=At4g10440 PE=3 SV=1
Length = 633
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 220 GLDFSIDEV--LATKKPGTIRIGLDIGGGVATFAVRMMERNITIVT-TSMNLNGPFNNFI 276
G D ID++ L G IR +D G GVA+F +++R+I V+ + + F
Sbjct: 196 GADAYIDDIARLIPLTDGGIRTAIDTGCGVASFGAYLLKRDIMAVSFAPRDTHEAQVQFA 255
Query: 277 ASRGVVPLYISI--SQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
RGV P I I S+RLP+ D+ H L W L+ + D RVLRPGG +
Sbjct: 256 LERGV-PAIIGIMGSRRLPYPARAFDLAHCSRCLIPWFKNDGLYLMEVD--RVLRPGG-Y 311
Query: 335 WL 336
W+
Sbjct: 312 WI 313
>sp|O80844|PMTG_ARATH Probable methyltransferase PMT16 OS=Arabidopsis thaliana
GN=At2g45750 PE=3 SV=1
Length = 631
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 220 GLDFSIDEV--LATKKPGTIRIGLDIGGGVATFAVRMMERNITIVT-TSMNLNGPFNNFI 276
G D ID++ L G+IR +D G GVA+F ++ RNIT ++ + + F
Sbjct: 190 GADAYIDDIGRLIDLSDGSIRTAIDTGCGVASFGAYLLSRNITTMSFAPRDTHEAQVQFA 249
Query: 277 ASRGVVPLYISI--SQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
RGV P I I + RLP+ D+ H L W + + D RVLRPGG +
Sbjct: 250 LERGV-PAMIGIMATIRLPYPSRAFDLAHCSRCLIPWGQNDGAYLMEVD--RVLRPGG-Y 305
Query: 335 WL 336
W+
Sbjct: 306 WI 307
>sp|Q9C884|PMTI_ARATH Probable methyltransferase PMT18 OS=Arabidopsis thaliana
GN=At1g33170 PE=2 SV=1
Length = 639
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 220 GLDFSIDEV--LATKKPGTIRIGLDIGGGVATFAVRMMERNITIVT-TSMNLNGPFNNFI 276
G D ID++ L G IR +D G GVA+F +++R+I ++ + + F
Sbjct: 213 GADAYIDDIARLIPLTDGAIRTAIDTGCGVASFGAYLLKRDIVAMSFAPRDTHEAQVQFA 272
Query: 277 ASRGVVPLYISI--SQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
RG VP I I S+RLP+ D+ H L W L+ D RVLRPGG +
Sbjct: 273 LERG-VPAIIGIMGSRRLPYPARAFDLAHCSRCLIPWFQNDGLYLTEVD--RVLRPGG-Y 328
Query: 335 WL 336
W+
Sbjct: 329 WI 330
>sp|Q94EJ6|PMTE_ARATH Probable methyltransferase PMT14 OS=Arabidopsis thaliana
GN=At4g18030 PE=1 SV=1
Length = 621
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 90/243 (37%), Gaps = 63/243 (25%)
Query: 111 RRYMSYKVNASCPDDELLAQKLLLKGCEPLPRRRCRAVGPSHYIEPYPLPKSLWTTPPDS 170
R M Y+ PD+E L RC P Y+ P+P PKS
Sbjct: 109 RENMIYRERHCPPDNEKL---------------RCLVPAPKGYMTPFPWPKSR------- 146
Query: 171 SLVWTAYTCKNYTCLINRKHTQKGFDDCKDCFDLQGVEKIRWTQKKGN------------ 218
+ Y + L K Q W Q +GN
Sbjct: 147 --DYVHYANAPFKSLTVEKAGQN------------------WVQFQGNVFKFPGGGTMFP 186
Query: 219 GGLDFSIDEVLATK--KPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFN-NF 275
G D I+E+ + K G++R LD G GVA++ M++RN+ ++ + N F
Sbjct: 187 QGADAYIEELASVIPIKDGSVRTALDTGCGVASWGAYMLKRNVLTMSFAPRDNHEAQVQF 246
Query: 276 IASRGVVPLYISI--SQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGL 333
RGV P I++ S LP+ D+ L W + + D RVLRPGG
Sbjct: 247 ALERGV-PAIIAVLGSILLPYPARAFDMAQCSRCLIPWTANEGTYLMEVD--RVLRPGG- 302
Query: 334 FWL 336
+W+
Sbjct: 303 YWV 305
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 42/93 (45%)
Query: 241 LDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLD 300
+D+ G+ FA + ++ +N + + RG++ +Y + + T D
Sbjct: 464 MDMNAGLGGFAAALESPKSWVMNVIPTINKNTLSVVYERGLIGIYHDWCEGFSTYPRTYD 523
Query: 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGL 333
+H+ V S + + L ++ + R+LRP G+
Sbjct: 524 FIHASGVFSLYQHSCKLEDILLETDRILRPEGI 556
>sp|Q9LYN3|PMTM_ARATH Probable methyltransferase PMT22 OS=Arabidopsis thaliana
GN=At3g56080 PE=3 SV=1
Length = 610
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 47/209 (22%)
Query: 144 RCRAVGPSHYIEPYPLPKSLWTTPPDSSLVWTAYTCKNYTCLINRKHTQKGFDDCKDCFD 203
+C P HY P P P+S ++W Y + L+ K Q
Sbjct: 147 KCLVPLPQHYKVPLPWPQS-------RDMIW--YDNVPHPKLVEYKKDQN---------- 187
Query: 204 LQGVEKIRWTQKKG------NGGLDFS---------IDEVLATKKPGT-IRIGLDIGGGV 247
W +K G GG F I + L G +R+ LD+G GV
Sbjct: 188 --------WVRKSGPFFVFPGGGTQFKDGVIHYINFIQKTLPILDWGKKVRVVLDVGCGV 239
Query: 248 ATFAVRMMERN-ITIVTTSMNLNGPFNNFIASRGV-VPLYISISQRLPFFDNTLDIVHSM 305
A+F ++++N IT+ + + F RG+ L + +Q+LPF DN D++H
Sbjct: 240 ASFGGTLLDKNVITMSFAPKDEHEAQIQFALERGIPATLAVIGTQKLPFPDNAYDVIHCA 299
Query: 306 HVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
+W + ++ RVLRPGG F
Sbjct: 300 RCRVHW--HGYGGRPLLELNRVLRPGGFF 326
Score = 38.5 bits (88), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 58/129 (44%)
Query: 241 LDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLD 300
+D+ G FA ++ + + ++ + I RG++ +Y + + + D
Sbjct: 477 MDMNAGYGGFAAALINKPLWVMNVIPVEGEDTLSTIFDRGLIGIYHDWCESFNTYPRSYD 536
Query: 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFN 360
++HS + +N L ++ +I R+LRPGG + + +L + + L S
Sbjct: 537 LLHSSFLFTNLSQRCDLMEVVVEIDRILRPGGYLAVQDTVEMLKKLNPILLSLRWSTNLY 596
Query: 361 KLKWVVGRK 369
+ K++VG K
Sbjct: 597 RGKFLVGLK 605
>sp|Q9SIZ3|PMTN_ARATH Probable methyltransferase PMT23 OS=Arabidopsis thaliana
GN=At2g40280 PE=1 SV=2
Length = 589
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 49/215 (22%)
Query: 139 PLPRRRCRAVGPSHYIEPYPLPKSLWTTPPDSSLVWTAYTCKNYTCLINRKHTQKGFDDC 198
P P +C P +Y P P PKS ++W Y + L+ K Q
Sbjct: 118 PEPSPKCLLPLPDNYKPPVPWPKS-------RDMIW--YDNVPHPKLVEYKKEQN----- 163
Query: 199 KDCFDLQGVEKIRWTQKKGN------GGLDFS---------IDEVLATKKPG-TIRIGLD 242
W +K+G GG F I++ L + K G IR+ LD
Sbjct: 164 -------------WVKKEGEFLVFPGGGTQFKFGVTHYVEFIEKALPSIKWGKNIRVVLD 210
Query: 243 IGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNFIASRGVVPLYISI--SQRLPFFDNTL 299
+G GVA+F +++++ IT+ + + F RG +P +S+ +Q+L F N
Sbjct: 211 VGCGVASFGGSLLDKDVITMSFAPKDEHEAQIQFALERG-IPATLSVIGTQQLTFPSNAF 269
Query: 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
D++H +W L ++ RVLRPGG F
Sbjct: 270 DLIHCARCRVHWDADGGKPLL--ELNRVLRPGGFF 302
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 236 TIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFF 295
T+R +D+ G FA ++ + ++ + + RG++ +Y + + +
Sbjct: 445 TVRNVMDMNAGFGGFAAALINLPLWVMNVVPVDKPDTLSVVYDRGLIGVYHDWCESVNTY 504
Query: 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIE 355
T D++HS +L + + ++ +I R++RPGG + +LE + L
Sbjct: 505 PRTYDLLHSSFLLGDLTQRCEIVQVVAEIDRIVRPGGYLVVQDNMETIMKLESILGSLHW 564
Query: 356 SVGFNKLKWVVGRK---LDRGPELR 377
S + +++VGRK PELR
Sbjct: 565 STKIYEDRFLVGRKGFWRPAKPELR 589
>sp|Q9ZW75|PMTJ_ARATH Probable methyltransferase PMT19 OS=Arabidopsis thaliana
GN=At2g43200 PE=3 SV=1
Length = 611
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 107 PDELRRY---MSYKVNASCPDDELLAQKLLLKGCEPLPRRRCRAVGPSHYIEPYPLPKSL 163
P R+Y Y+ CPD +AQ+ + RC P+ Y P+P P+S
Sbjct: 107 PSTARQYSIERHYRRERHCPD---IAQE----------KFRCLVPKPTGYKTPFPWPES- 152
Query: 164 WTTPPDSSLVWTAYTCKNYTCLINRKHTQKGFDDCKDCFDLQGVEKIRWTQKKGNGGLDF 223
W + + L K TQ D F G GG+
Sbjct: 153 ------RKYAW--FRNVPFKRLAELKKTQNWVRLEGDRFVFPG------GGTSFPGGVKD 198
Query: 224 SIDEVLATK--KPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASRG 280
+D +L+ G+IR LDIG GVA+F ++ I T+ +++ F RG
Sbjct: 199 YVDVILSVLPLASGSIRTVLDIGCGVASFGAFLLNYKILTMSIAPRDIHEAQVQFALERG 258
Query: 281 VVPLYISISQ-RLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWL 336
+ + +S +LP+ + D+VH L NW L+ + D RVLRP G +W+
Sbjct: 259 LPAMLGVLSTYKLPYPSRSFDMVHCSRCLVNWTSYDGLYLMEVD--RVLRPEG-YWV 312
Score = 38.5 bits (88), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/116 (19%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 235 GTIRIGLDIGGGVATFAVRMMERNITIV-TTSMNLNGPFNNFIASRGVVPLYISISQRLP 293
G R +D+ G+ FA +++ + ++ +L + RG++ Y++ + L
Sbjct: 465 GKYRNVIDMNAGLGGFAAALIKYPMWVMNVVPFDLKPNTLGVVYDRGLIGTYMNWCEALS 524
Query: 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDV 349
+ T D++H+ V S ++ + ++ ++ R+LRP G + F V +++ +
Sbjct: 525 TYPRTYDLIHANGVFSLYLDKCDIVDILLEMQRILRPEGAVIIRDRFDVLVKVKAI 580
>sp|Q8H118|PMT1_ARATH Probable methyltransferase PMT1 OS=Arabidopsis thaliana
GN=At3g23300 PE=1 SV=2
Length = 611
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 235 GTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNN---FIASRGVVPLYISI--S 289
G +R LD+G GVA+F ++ I+T S+ N N F RG +P Y+ + +
Sbjct: 209 GRLRTFLDVGCGVASFGGYLLASE--IMTMSLAPNDVHQNQIQFALERG-IPAYLGVLGT 265
Query: 290 QRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDV 349
+RLP+ + ++ H +W+ + L+ ++ RVLRPGG F ED+
Sbjct: 266 KRLPYPSRSFELAHCSRCRIDWLQRDGI--LLLELDRVLRPGGYFAYSSPEAYAQDEEDL 323
Query: 350 YVPLIESVGFNKLKWVVGRKLDR 372
+ S ++ W + K ++
Sbjct: 324 RIWREMSALVGRMCWTIAAKRNQ 346
>sp|O22285|PMTB_ARATH Probable methyltransferase PMT11 OS=Arabidopsis thaliana
GN=At2g39750 PE=2 SV=1
Length = 694
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 101/247 (40%), Gaps = 42/247 (17%)
Query: 105 LFPDELRRYMSYKVNASCPDDELLAQKLLLKGCEPLPR--RRCRAVG---------PSHY 153
+ P+ +R Y+ C D+ + +KL K E R R C G P Y
Sbjct: 179 MCPESMREYIP------CLDNTDVIKKL--KSTERGERFERHCPEKGKGLNCLVPPPKGY 230
Query: 154 IEPYPLPKSLWTTPPDSSLVWTAYTCKNYTCLINRKHTQKGFDDCKDCFDLQGVEKIRWT 213
+P P PKS VW ++ +T L+ K Q K+ F G
Sbjct: 231 RQPIPWPKS-------RDEVW--FSNVPHTRLVEDKGGQNWISRDKNKFKFPG------G 275
Query: 214 QKKGNGGLDFSIDEVLATKKPGT----IRIGLDIGGGVATFAVRMMERNI-TIVTTSMNL 268
+ G D +D++ T IR+ +D+G GVA+F ++ R++ T+ ++
Sbjct: 276 GTQFIHGADQYLDQMSKMVSDITFGKHIRVAMDVGCGVASFGAYLLSRDVMTMSVAPKDV 335
Query: 269 NGPFNNFIASRGVVPLYISIS-QRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRV 327
+ F RGV + + + +RL + D++H NW T L+ +I R+
Sbjct: 336 HENQIQFALERGVPAMAAAFATRRLLYPSQAFDLIHCSRCRINW--TRDDGILLLEINRM 393
Query: 328 LRPGGLF 334
LR GG F
Sbjct: 394 LRAGGYF 400
>sp|Q940J9|PMT8_ARATH Probable methyltransferase PMT8 OS=Arabidopsis thaliana
GN=At1g04430 PE=1 SV=1
Length = 623
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 87/218 (39%), Gaps = 42/218 (19%)
Query: 135 KGCEPLPRR-RCRAVGPSHYIEPYPLPKSLWTTPPDSSLVWTAYTCKNYTCLINRKHTQK 193
+ C P RR C PS Y P PKS VW A N HT
Sbjct: 120 RHCPPPERRFNCLIPPPSGYKVPIKWPKS-------RDEVWKA----------NIPHTHL 162
Query: 194 GFDDCKDCFDLQGVEKIRWTQKKGNGGLDFSIDEVLAT------------KKPGTIRIGL 241
+ + ++ EKI + G + D+ +A+ G +R L
Sbjct: 163 AKEKSDQNWMVEKGEKISFP--GGGTHFHYGADKYIASIANMLNFSNDVLNDEGRLRTVL 220
Query: 242 DIGGGVATFAVRMMERNITIVTTSMNLNGPFNN---FIASRGVVPLYISI--SQRLPFFD 296
D+G GVA+F ++ + I+T S+ N N F RG +P Y+ + ++RLP+
Sbjct: 221 DVGCGVASFGAYLLASD--IMTMSLAPNDVHQNQIQFALERG-IPAYLGVLGTKRLPYPS 277
Query: 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
+ + H +W+ L L D RVLRPGG F
Sbjct: 278 RSFEFAHCSRCRIDWLQRDGLLLLELD--RVLRPGGYF 313
>sp|Q94KE1|PMTA_ARATH Probable methyltransferase PMT10 OS=Arabidopsis thaliana
GN=At1g77260 PE=2 SV=1
Length = 655
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 238 RIGLDIGGGVATFAVRMMERNITIVTTS-MNLNGPFNNFIASRGVVPLYISI--SQRLPF 294
R+ LDIG GVA+F +M+RN T ++ + +++ F RG VP +++ ++RL +
Sbjct: 268 RVALDIGCGVASFGAFLMQRNTTTLSVAPKDVHENQIQFALERG-VPAMVAVFATRRLLY 326
Query: 295 FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
+ +++H NW T L+ ++ R+LR GG F
Sbjct: 327 PSQSFEMIHCSRCRINW--TRDDGILLLEVNRMLRAGGYF 364
>sp|Q93W95|PMTD_ARATH Probable methyltransferase PMT13 OS=Arabidopsis thaliana
GN=At4g00740 PE=1 SV=1
Length = 600
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
Query: 139 PLPRRR--CRAVGPSHYIEPYPLPKSLWTTPPDSSLVWTAYTCKNYTCLINRKHTQKGFD 196
PLP C PS Y P P P+SL +W A Y + +RK Q
Sbjct: 116 PLPEETPLCLIPPPSGYKIPVPWPESL-------HKIWHANM--PYNKIADRKGHQGWMK 166
Query: 197 DCKDCFDLQGVEKIRWTQKKGNGGLDFSIDEVLATKKP---GTIRIGLDIGGGVATFAVR 253
+ F G T G G E LA P GT+R LD+G GVA+F
Sbjct: 167 REGEYFTFPGGG----TMFPGGAG---QYIEKLAQYIPLNGGTLRTALDMGCGVASFGGT 219
Query: 254 MMERNITIVT-TSMNLNGPFNNFIASRGVVPLYISI--SQRLPFFDNTLDIVHSMHVLSN 310
++ + I ++ + + F RG VP ++++ ++RLPF + D++H L
Sbjct: 220 LLSQGILALSFAPRDSHKSQIQFALERG-VPAFVAMLGTRRLPFPAYSFDLMHCSRCLIP 278
Query: 311 WIPTTLLHFLMFDIYRVLRPGG 332
+ +F+ D R+LRPGG
Sbjct: 279 FTAYNATYFIEVD--RLLRPGG 298
>sp|Q8L7V3|PMTQ_ARATH Probable methyltransferase PMT26 OS=Arabidopsis thaliana
GN=At5g64030 PE=1 SV=1
Length = 829
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 12/150 (8%)
Query: 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNFIASR 279
+DF + V A R+ LD+G GVA+F + +R+ IT+ + + F R
Sbjct: 407 IDFIQESVPAIAWGKRSRVVLDVGCGVASFGGFLFDRDVITMSLAPKDEHEAQVQFALER 466
Query: 280 GVVPLYISI-SQRLPFFDNTLDIVHSMHVLSNWIPTTLLHF----LMFDIYRVLRPGGLF 334
G+ + + + RLPF DIVH W H L+ ++ RVLRPGG F
Sbjct: 467 GIPAISAVMGTTRLPFPGRVFDIVHCARCRVPW------HIEGGKLLLELNRVLRPGGFF 520
Query: 335 WLDHFFCVGAQLEDVYVPLIESVGFNKLKW 364
+ EDV + S K+ W
Sbjct: 521 VWSATPVYQKKTEDVEIWKAMSELIKKMCW 550
>sp|Q9FG39|PMTC_ARATH Probable methyltransferase PMT12 OS=Arabidopsis thaliana
GN=At5g06050 PE=2 SV=1
Length = 682
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 238 RIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASRGVVPLYISI-SQRLPFF 295
R+ LDIG GVA+F +M RN+ T+ +++ F RGV + + ++RL +
Sbjct: 276 RVVLDIGCGVASFGAYLMSRNVLTMSIAPKDVHENQIQFALERGVPAMVAAFTTRRLLYP 335
Query: 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
D+VH NW T L+ ++ R+LR GG F
Sbjct: 336 SQAFDLVHCSRCRINW--TRDDGILLLEVNRMLRAGGYF 372
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 237 IRIGLDIGGGVATFAVRMMERNITI-VTTSMNLNGPFN-NFIASRGVVPLYISISQRLPF 294
+R LD+ G FA + E + V + ++GP I RG++ + +
Sbjct: 519 LRNVLDMRAGFGGFAAALAELKVDCWVLNVIPVSGPNTLPVIYDRGLLGVMHDWCEPFDT 578
Query: 295 FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLI 354
+ T D++H+ + S + +M ++ R+LRPGG ++ V ++L+++
Sbjct: 579 YPRTYDLLHAAGLFSIERKRCNMTTMMLEMDRILRPGGRVYIRDTINVTSELQEI----- 633
Query: 355 ESVGFNKLKWVVG-RKLDRGPELREMYLSALLEKPF 389
N ++W R+ GP Y L EK F
Sbjct: 634 ----GNAMRWHTSLRETAEGPH--SSYRVLLCEKRF 663
>sp|Q9C9Q8|PMTT_ARATH Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana
GN=QUA2 PE=1 SV=2
Length = 684
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 222 DFS--IDEVLATKKPGTIRIG----LDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNN 274
D+S I E++ KK I G LDIG G +F ++ + I T+ + +G
Sbjct: 253 DYSHQIAEMIGIKKDNFIEAGVRTILDIGCGYGSFGAHLLSKQILTMCIANYEASGSQVQ 312
Query: 275 FIASRGVVPLYIS-ISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGL 333
RG+ + S IS++LP+ + D++H + +W L L+ +I RVL+PGG
Sbjct: 313 LTLERGLPAMIGSFISKQLPYPSLSFDMLHCLRCGIDWDQKDGL--LLVEIDRVLKPGGY 370
Query: 334 F 334
F
Sbjct: 371 F 371
>sp|Q93YV7|PMT3_ARATH Probable methyltransferase PMT3 OS=Arabidopsis thaliana
GN=At4g14360 PE=1 SV=1
Length = 608
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 235 GTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNN---FIASRGV-VPLYISISQ 290
G +R D+G GVA+F ++ +I +T S+ N N F RG+ L + ++
Sbjct: 206 GRLRTVFDVGCGVASFGGYLLSSDI--LTMSLAPNDVHQNQIQFALERGIPASLGVLGTK 263
Query: 291 RLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVY 350
RLP+ + ++ H +W+ + L+ ++ RVLRPGG F ED+
Sbjct: 264 RLPYPSRSFELSHCSRCRIDWLQRDGI--LLLELDRVLRPGGYFAYSSPEAYAQDEEDLR 321
Query: 351 VPLIESVGFNKLKWVVGRKLDR 372
+ S ++ W + K ++
Sbjct: 322 IWREMSALVERMCWKIAAKRNQ 343
>sp|Q0WT31|PMTP_ARATH Probable methyltransferase PMT25 OS=Arabidopsis thaliana
GN=At2g34300 PE=1 SV=2
Length = 770
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 238 RIGLDIGGGVATFAVRMMERNITIVT-TSMNLNGPFNNFIASRGV-VPLYISISQRLPFF 295
R+ LD+G GVA+F + ER++ ++ + + F RG+ L + ++RLPF
Sbjct: 366 RVILDVGCGVASFGGYLFERDVLALSFAPKDEHEAQVQFALERGIPAMLNVMGTKRLPFP 425
Query: 296 DNTLDIVHSMHVLSNWIPTTLLHF----LMFDIYRVLRPGGLF 334
+ D++H W H L+ ++ R LRPGG F
Sbjct: 426 GSVFDLIHCARCRVPW------HIEGGKLLLELNRALRPGGFF 462
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 275 FIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
I RG+ +Y + + T D++H+ H+ S L +M +I R+LRP G F
Sbjct: 656 IIYERGLFGIYHDWCESFNTYPRTYDLLHADHLFSTLRKRCNLVSVMAEIDRILRPQGTF 715
>sp|Q9SD39|PMTR_ARATH Probable methyltransferase PMT27 OS=Arabidopsis thaliana
GN=At3g51070 PE=3 SV=1
Length = 895
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 238 RIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISI--SQRLPFF 295
R+ LD+G GVA+F + ER++ ++ + A +P ++ S+RLPF
Sbjct: 497 RVILDVGCGVASFGGFLFERDVIAMSLAPKDEHEAQVQFALERKIPAISAVMGSKRLPFP 556
Query: 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
D++H W + L+ ++ R+LRPGG F
Sbjct: 557 SRVFDLIHCARCRVPWHNEGGM--LLLELNRMLRPGGYF 593
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 237 IRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFN-NFIASRGVVPLYISISQRLPFF 295
+R +D+ FA + + + ++ +N+N P I RG+ +Y + +
Sbjct: 750 VRNVMDMRAVYGGFAAALKDLQVWVMNV-VNINSPDTLPIIYERGLFGIYHDWCESFSTY 808
Query: 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGG 332
+ D++H+ H+ S L +M ++ R++RPGG
Sbjct: 809 PRSYDLLHADHLFSKLRTRCNLVPVMAEVDRIVRPGG 845
>sp|Q6NPR7|PMTO_ARATH Probable methyltransferase PMT24 OS=Arabidopsis thaliana
GN=At1g29470 PE=1 SV=1
Length = 770
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 238 RIGLDIGGGVATFAVRMMERNITIVT-TSMNLNGPFNNFIASRGVVPLY-ISISQRLPFF 295
R+ LD+G GVA+F + +R++ ++ + + F RG+ + + ++RLPF
Sbjct: 366 RVILDVGCGVASFGGYLFDRDVLALSFAPKDEHEAQVQFALERGIPAMSNVMGTKRLPFP 425
Query: 296 DNTLDIVHSMHVLSNWIPTTLLHF----LMFDIYRVLRPGGLF 334
+ D++H W H L+ ++ R LRPGG F
Sbjct: 426 GSVFDLIHCARCRVPW------HIEGGKLLLELNRALRPGGFF 462
Score = 35.0 bits (79), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 275 FIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
I RG+ +Y + + T D++H+ H+ S+ L +M ++ R+LRP G F
Sbjct: 656 IIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSSLKKRCNLVGVMAEVDRILRPQGTF 715
>sp|Q84TJ0|PMT6_ARATH Probable methyltransferase PMT6 OS=Arabidopsis thaliana
GN=At3g10200 PE=2 SV=1
Length = 591
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 27/227 (11%)
Query: 118 VNASCPDDELLAQKLLLKGCEPLPRRR-CRAVGPSHYIEPYPLPKSLWTTPPDSSLVWTA 176
V+ P L ++ L + C PL R C P+ Y P P S VW +
Sbjct: 91 VHQLLPSLNLSRREDLERHCPPLEHRLFCLVPPPNDYKIPIRWPTS-------RDYVWRS 143
Query: 177 YTCKNYTCLINRKHTQKGFDDCKDCFDLQG------VEKIRWTQKKGNGGLDFSIDEVLA 230
N+T L K Q + + G + Q+ GN +E
Sbjct: 144 NV--NHTHLAQVKGGQNWVHEQGQFWWFPGGGTHFKHGAAEYIQRLGN----MMTNETGD 197
Query: 231 TKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFN--NFIASRGVVPLYISI 288
+ G +++ LD+G GVA+FA ++ I ++ + +G N F RG+ + ++
Sbjct: 198 LRSAGVVQV-LDVGCGVASFAAYLLPLGIQTISFAPK-DGHENQIQFALERGIGAMISAV 255
Query: 289 S-QRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
+ ++LP+ + ++VH +W T L+ +++R+LRP G F
Sbjct: 256 ATKQLPYPAASFEMVHCSRCRVDW--HTNDGILLKEVHRLLRPNGFF 300
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 237 IRIGLDIGGGVATFAVRMMERNI---TIVTTSMN--LNGPFNNFIASRGVVPLYISISQR 291
+R +D+ + FA M + IV +MN L+G F RG+ + +
Sbjct: 440 VRNVMDMNAFIGGFAAAMNSYPVWVMNIVPATMNDTLSGIF-----ERGLNGAFHDWCEA 494
Query: 292 LPFFDNTLDIVHSMHVLSNWIPT----TLLHFLMFDIYRVLRPGGL 333
+ T D+VHS HV S++ + LL +M ++ R++RP G
Sbjct: 495 FSTYPRTYDLVHSDHVFSHYNKSYGDGCLLEDIMLEMDRIVRPQGF 540
>sp|Q9TYP1|STRM1_CAEEL Sterol 4-C-methyltransferase strm-1 OS=Caenorhabditis elegans
GN=strm-1 PE=3 SV=2
Length = 334
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 241 LDIGGGVATFAVRMME--RNITIVTTSMNLNGPFNNFIASRGV---VPLYISISQRLPFF 295
LDIG G+ + + + +T VT + N N A+ G+ + + Q++PF
Sbjct: 100 LDIGCGIGGVMLDIADFGAKLTGVTIAPNEAEIGNEKFANMGISDRCKIVAADCQKMPFE 159
Query: 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
D+T D+ ++++ L +IP L +M +I RVL+PGG F
Sbjct: 160 DSTFDVAYAIYSLK-YIPN--LDKVMKEIQRVLKPGGKF 195
>sp|Q8GYW9|PMT4_ARATH Probable methyltransferase PMT4 OS=Arabidopsis thaliana
GN=At1g13860 PE=2 SV=2
Length = 603
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 237 IRIGLDIGGGVATFAVRMMERNIT-IVTTSMNLNGPFNNFIASRGVVPLYIS--ISQRLP 293
IR LDIG G +F ++ N+ I +G RG+ P I S++LP
Sbjct: 201 IRTVLDIGCGFGSFGAHLVSLNVMPICIAEYETSGSQVQLALERGL-PAMIGNFFSKQLP 259
Query: 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWL 336
+ + D+VH W + L+ ++ RVL+PGG F L
Sbjct: 260 YPALSFDMVHCAQCGITWDIKDAM--LLLEVDRVLKPGGYFVL 300
>sp|Q9LN50|PMTS_ARATH Probable methyltransferase PMT28 OS=Arabidopsis thaliana
GN=At1g19430 PE=1 SV=1
Length = 724
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 236 TIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNF--IASRGVVPLYIS--ISQR 291
+RI LDIG ++F +++++ ++T S+ L + +A P ++S S+R
Sbjct: 343 NVRIVLDIGCSDSSFVAALLDKD--VLTVSLGLKDDLVDLAQVALERGFPTFVSSLASRR 400
Query: 292 LPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWL 336
LPF D +H +W + L+ ++ R+LRP G F L
Sbjct: 401 LPFPSGVFDTIHCAACGVHW--HSHGGKLLLEMNRILRPNGYFIL 443
>sp|Q9LZA4|PMT7_ARATH Probable methyltransferase PMT7 OS=Arabidopsis thaliana
GN=At5g04060 PE=1 SV=1
Length = 600
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 241 LDIGGGVATFAVRMMERNITIVTTSMNLNGPFN--NFIASRGVVPLYISIS-QRLPFFDN 297
LD+G GVA+FA ++ I ++ + +G N F RG+ + +I+ +++P+
Sbjct: 218 LDVGCGVASFAAYLLPLGIKTMSFAPK-DGHENQIQFALERGIRAMISAIATKQMPYPAA 276
Query: 298 TLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLF 334
+ D+VH +W + LM ++ R+LRP G F
Sbjct: 277 SFDMVHCSRCRVDWHENDGV--LMKEVNRLLRPNGYF 311
>sp|Q8YDE4|UBIE_BRUME Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=ubiE PE=3 SV=1
Length = 269
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 231 TKKPGTIRIGLDIGGGVATFAVRMMER-----NITIVTTSMNLNGPFNNFIASRGVV--- 282
+K+PG LD+ GG A R++E ++TI+ + ++ G +G++
Sbjct: 78 SKRPGWT--SLDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLIDNL 135
Query: 283 PLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342
+ ++ LPF DN+ D + N +P + + + YRVL+PGG F C+
Sbjct: 136 EFVEANAEELPFEDNSFDAYTIAFGIRN-VPH--IDKALSEAYRVLKPGG-----RFLCL 187
Query: 343 GAQLEDVYVPLIESV 357
+ +V +P+++ V
Sbjct: 188 --EFSEVELPVLDKV 200
>sp|C0RMK3|UBIE_BRUMB Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella melitensis biotype 2 (strain ATCC 23457)
GN=ubiE PE=3 SV=1
Length = 269
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 231 TKKPGTIRIGLDIGGGVATFAVRMMER-----NITIVTTSMNLNGPFNNFIASRGVV--- 282
+K+PG LD+ GG A R++E ++TI+ + ++ G +G++
Sbjct: 78 SKRPGWT--SLDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLIDNL 135
Query: 283 PLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342
+ ++ LPF DN+ D + N +P + + + YRVL+PGG F C+
Sbjct: 136 EFVEANAEELPFEDNSFDAYTIAFGIRN-VPH--IDKALSEAYRVLKPGG-----RFLCL 187
Query: 343 GAQLEDVYVPLIESV 357
+ +V +P+++ V
Sbjct: 188 --EFSEVELPVLDKV 200
>sp|Q576Q0|UBIE_BRUAB Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella abortus biovar 1 (strain 9-941) GN=ubiE PE=3
SV=1
Length = 269
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 231 TKKPGTIRIGLDIGGGVATFAVRMMER-----NITIVTTSMNLNGPFNNFIASRGVV--- 282
+K+PG LD+ GG A R++E ++TI+ + ++ G +G++
Sbjct: 78 SKRPGWT--SLDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLIDNL 135
Query: 283 PLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342
+ ++ LPF DN+ D + N +P + + + YRVL+PGG F C+
Sbjct: 136 EFVEANAEELPFEDNSFDAYTIAFGIRN-VPH--IDKALSEAYRVLKPGG-----RFLCL 187
Query: 343 GAQLEDVYVPLIESV 357
+ +V +P+++ V
Sbjct: 188 --EFSEVELPVLDKV 200
>sp|Q2YJM4|UBIE_BRUA2 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella abortus (strain 2308) GN=ubiE PE=3 SV=1
Length = 269
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 231 TKKPGTIRIGLDIGGGVATFAVRMMER-----NITIVTTSMNLNGPFNNFIASRGVV--- 282
+K+PG LD+ GG A R++E ++TI+ + ++ G +G++
Sbjct: 78 SKRPGWT--SLDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLIDNL 135
Query: 283 PLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342
+ ++ LPF DN+ D + N +P + + + YRVL+PGG F C+
Sbjct: 136 EFVEANAEELPFEDNSFDAYTIAFGIRN-VPH--IDKALSEAYRVLKPGG-----RFLCL 187
Query: 343 GAQLEDVYVPLIESV 357
+ +V +P+++ V
Sbjct: 188 --EFSEVELPVLDKV 200
>sp|B2SC50|UBIE_BRUA1 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella abortus (strain S19) GN=ubiE PE=3 SV=1
Length = 269
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 231 TKKPGTIRIGLDIGGGVATFAVRMMER-----NITIVTTSMNLNGPFNNFIASRGVV--- 282
+K+PG LD+ GG A R++E ++TI+ + ++ G +G++
Sbjct: 78 SKRPGWT--SLDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLIDNL 135
Query: 283 PLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342
+ ++ LPF DN+ D + N +P + + + YRVL+PGG F C+
Sbjct: 136 EFVEANAEELPFEDNSFDAYTIAFGIRN-VPH--IDKALSEAYRVLKPGG-----RFLCL 187
Query: 343 GAQLEDVYVPLIESV 357
+ +V +P+++ V
Sbjct: 188 --EFSEVELPVLDKV 200
>sp|A9MCZ2|UBIE_BRUC2 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=ubiE PE=3 SV=1
Length = 269
Score = 39.7 bits (91), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 231 TKKPGTIRIGLDIGGGVATFAVRMME-----RNITIVTTSMNLNGPFNNFIASRGVV--- 282
+K+PG LD+ GG A R++E ++TI+ + ++ G +G++
Sbjct: 78 SKRPGWT--SLDVAGGTGDIAFRIVEVSGRQAHVTILDINGSMLGVGRERAIKKGLIDNL 135
Query: 283 PLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342
+ ++ LPF DN+ D + N +P + + + YRVL+PGG F C+
Sbjct: 136 EFVEANAEELPFEDNSFDAYTIAFGIRN-VPH--IDKALSEAYRVLKPGG-----RFLCL 187
Query: 343 GAQLEDVYVPLIESV 357
+ +V +P+++ V
Sbjct: 188 --EFSEVELPVLDKV 200
>sp|Q8FUZ3|UBIE_BRUSU Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella suis biovar 1 (strain 1330) GN=ubiE PE=3
SV=1
Length = 269
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 231 TKKPGTIRIGLDIGGGVATFAVRMME-----RNITIVTTSMNLNGPFNNFIASRGVV--- 282
+K+PG LD+ GG A R++E ++TI+ + ++ G +G++
Sbjct: 78 SKRPGWT--SLDVAGGTGDIAFRIVEVSGRQAHVTILDINGSMLGVGRERAIKKGLIDNL 135
Query: 283 PLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342
+ ++ LPF DN+ D + N +P + + + YRVL+PGG F C+
Sbjct: 136 EFVEANAEELPFEDNSFDAYTIAFGIRN-VPH--IDKALSEAYRVLKPGG-----RFLCL 187
Query: 343 GAQLEDVYVPLIESV 357
+ +V +P+++ V
Sbjct: 188 --EFSEVELPVLDKV 200
>sp|Q3EC77|PMT5_ARATH Probable methyltransferase PMT5 OS=Arabidopsis thaliana
GN=At2g03480 PE=2 SV=2
Length = 606
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 237 IRIGLDIGGGVATFAVRMMERNIT-IVTTSMNLNGPFNNFIASRGVVPLYIS--ISQRLP 293
+R LDIG G +F ++ + I G RG+ P I S++LP
Sbjct: 217 VRTVLDIGCGFGSFGAHLVSLKLMPICIAEYEATGSQVQLALERGL-PAMIGNFFSKQLP 275
Query: 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWL 336
+ + D+VH + W + L+ ++ RVL+PGG F L
Sbjct: 276 YPALSFDMVHCAQCGTTWDIKDAM--LLLEVDRVLKPGGYFVL 316
>sp|P65349|Y3374_MYCBO Uncharacterized methyltransferase Mb3374 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb3374 PE=3 SV=1
Length = 243
Score = 38.5 bits (88), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 234 PGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFI-ASRGVVPLYISI---S 289
P R LD+G G R++ER + +V P + R +P +++ +
Sbjct: 36 PAAARRVLDLGAGTGKLTTRLVERGLDVVAVD-----PIPEMLDVLRAALPQTVALLGTA 90
Query: 290 QRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPG---GLFW 335
+ +P DN++D V +W+ + ++ RVLRPG GL W
Sbjct: 91 EEIPLDDNSVDAVLVAQAW-HWVDPA---RAIPEVARVLRPGGRLGLVW 135
>sp|P65348|Y3342_MYCTU Uncharacterized methyltransferase Rv3342/MT3445 OS=Mycobacterium
tuberculosis GN=Rv3342 PE=3 SV=1
Length = 243
Score = 38.5 bits (88), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 234 PGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFI-ASRGVVPLYISI---S 289
P R LD+G G R++ER + +V P + R +P +++ +
Sbjct: 36 PAAARRVLDLGAGTGKLTTRLVERGLDVVAVD-----PIPEMLDVLRAALPQTVALLGTA 90
Query: 290 QRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPG---GLFW 335
+ +P DN++D V +W+ + ++ RVLRPG GL W
Sbjct: 91 EEIPLDDNSVDAVLVAQAW-HWVDPA---RAIPEVARVLRPGGRLGLVW 135
>sp|Q55423|Y829_SYNY3 Uncharacterized methyltransferase sll0829 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=sll0829 PE=3 SV=1
Length = 212
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 234 PGTIRIGLDIGGGVATFAVRMMERNITIVTTSMN--------LNGPFNNFIASRGVVPLY 285
PG + L GGG AT V + + T+V + +N P ++
Sbjct: 45 PGQKVLDLCCGGGQAT--VYLAQSGATVVGLDASPKALGRAKINVPQATYVQG------- 95
Query: 286 ISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWL 336
+++ LPF + D+VH+ L P L ++ ++RVL+PGG+F L
Sbjct: 96 --LAEDLPFGEGEFDLVHTSVALHEMTPAQL-QSIISGVHRVLKPGGIFAL 143
>sp|P34666|COQ5_CAEEL 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Caenorhabditis elegans GN=coq-5 PE=3 SV=2
Length = 285
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 241 LDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISIS---------QR 291
LD+ GG A R++ + T T ++N P + R I S ++
Sbjct: 100 LDMAGGTGDIAFRILRHSPTAKVTVSDINQPMLDVGKKRAEKERDIQPSRAEWVCANAEQ 159
Query: 292 LPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVY 350
+PF NT D+ + N T ++ + +RVL+PGG + F V + L+ +Y
Sbjct: 160 MPFESNTYDLFTMSFGIRN---CTHPEKVVREAFRVLKPGGQLAILEFSEVNSALKPIY 215
>sp|O14321|ERG6_SCHPO Sterol 24-C-methyltransferase erg6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=erg6 PE=2 SV=1
Length = 378
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 233 KPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIASRGVVPLYISIS 289
KPG+ R+ LD+G GV A + E N+ + + NN+ R + + +
Sbjct: 123 KPGS-RV-LDVGCGVGGPAREITEFTGCNLVGLNNNDYQISRCNNYAVKRNLDKKQVFVK 180
Query: 290 ---QRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQL 346
+PF DNT D V+++ + L + +I+RVL+PGG+F + + V +
Sbjct: 181 GDFMHMPFEDNTFDYVYAIEAT---VHAPSLEGVYGEIFRVLKPGGVFGV--YEWVMSDD 235
Query: 347 EDVYVPLIESVGFN 360
D +P + +N
Sbjct: 236 YDSSIPKHREIAYN 249
>sp|Q8LBV4|Y1814_ARATH Uncharacterized methyltransferase At1g78140, chloroplastic
OS=Arabidopsis thaliana GN=At1g78140 PE=1 SV=1
Length = 355
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 291 RLPFFDNTLDIVHSMHVLSNW-IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG 343
RLPF ++D VH+ L W P++ + +I RVLRPGG+F F G
Sbjct: 247 RLPFLSGSVDAVHAGAALHCWPSPSSAVA----EISRVLRPGGVFVATTFIYDG 296
>sp|Q1LRG9|UBIE_RALME Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 /
DSM 2839) GN=ubiE PE=3 SV=1
Length = 243
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 241 LDIGGGVATFAVRMMERN-------ITIVTTSMNLNGPFNNFIASRGVV-PLYISISQRL 292
LDI GG A ++ +T + SM G + + ++GVV P+ + ++R+
Sbjct: 63 LDIAGGTGDLAKAFAKQAGPTGEVWLTDINESMLRVG--RDRLLNKGVVTPVALCDAERI 120
Query: 293 PFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVP 352
PF DN D+V L N T + ++ RV++PGG + F V LE Y
Sbjct: 121 PFPDNYFDLVTVAFGLRN---MTHKDAALAEMRRVIKPGGKVMVLEFSKVWKPLEKFY-- 175
Query: 353 LIESVGFNKLKWVVGRKLDRGPELR 377
+ F L W+ R P R
Sbjct: 176 --DVYSFKVLPWLGERVAGDAPSYR 198
>sp|A6WYI0|UBIE_OCHA4 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168) GN=ubiE PE=3 SV=1
Length = 263
Score = 36.6 bits (83), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 20/135 (14%)
Query: 231 TKKPGTIRIGLDIGGGVATFAVRMMER-----NITIVTTSMNLNGPFNNFIASRGV---V 282
+K+PG LD+ GG A R++E ++TI+ + ++ G +G+ +
Sbjct: 72 SKRPGWTS--LDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLADNL 129
Query: 283 PLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342
+ ++ LPF D + D + N +P + + + YRVL+PGG F C+
Sbjct: 130 EFVEASAEELPFEDASFDAYTISFGIRN-VPH--IDKALSEAYRVLKPGG-----RFLCL 181
Query: 343 GAQLEDVYVPLIESV 357
+ +V +P+++ V
Sbjct: 182 --EFSEVELPVLDKV 194
>sp|Q0KEH6|UBIE_CUPNH Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier 337) GN=ubiE PE=3 SV=1
Length = 243
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 241 LDIGGGVATFAVRMMERN-------ITIVTTSMNLNGPFNNFIASRGVV-PLYISISQRL 292
LDI GG A ++ +T + SM G + + ++G+V P+ + ++R+
Sbjct: 63 LDIAGGTGDLAKAFAKQAGPTGEVWLTDINESMLRVG--RDRLLNKGIVTPVCLCDAERI 120
Query: 293 PFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVP 352
PF DN D+V L N T + ++ RV++PGG + F V LE Y
Sbjct: 121 PFPDNHFDLVTVAFGLRN---MTHKDAALAEMRRVVKPGGKVMVLEFSKVWKPLEKAY-- 175
Query: 353 LIESVGFNKLKWVVGRKLDRGPELR 377
+ F L W+ R P R
Sbjct: 176 --DVYSFKVLPWLGERVAGDAPSYR 198
>sp|Q8VZV7|PMT9_ARATH Probable methyltransferase PMT9 OS=Arabidopsis thaliana
GN=At5g14430 PE=1 SV=1
Length = 612
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 235 GTIRIGLDIGGGVATFAVRMMERNITIVTTSMN-LNGPFNNFIASRGV-VPLYISISQRL 292
G+IR LD+G GVA+F ++ +I ++ + N ++ F RG+ L + ++RL
Sbjct: 210 GSIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHQNQIQFALERGIPSTLGVLGTKRL 269
Query: 293 PFFDNTLDIVHSMHVLSNWI 312
P+ + ++ H +W+
Sbjct: 270 PYPSRSFELAHCSRCRIDWL 289
>sp|B2AH07|UBIE_CUPTR Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Cupriavidus taiwanensis (strain R1 / LMG 19424)
GN=ubiE PE=3 SV=1
Length = 243
Score = 35.4 bits (80), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 241 LDIGGGVATFAVRMMERN-------ITIVTTSMNLNGPFNNFIASRGVV-PLYISISQRL 292
LDI GG A ++ +T + SM G + + ++G+V P+ + ++++
Sbjct: 63 LDIAGGTGDLAKAFAKQAGPTGQVWLTDINESMLRVG--RDRLLNKGIVTPVALCDAEKI 120
Query: 293 PFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVP 352
PF DN D+V L N T + ++ RV++PGG + F V LE Y
Sbjct: 121 PFPDNYFDLVTVAFGLRN---MTHKEAALAEMRRVVKPGGKVMVLEFSKVWKPLEKAY-- 175
Query: 353 LIESVGFNKLKWVVGRKLDRGPELR 377
+ F L W+ R P R
Sbjct: 176 --DVYSFKVLPWLGQRVAGDAPSYR 198
>sp|B4RK11|UBIE_NEIG2 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Neisseria gonorrhoeae (strain NCCP11945) GN=ubiE PE=3
SV=1
Length = 245
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 241 LDIGGGVATFAVRMMERN-------ITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP 293
LDI GG + +R +T + +SM G + + ++P+ ++ +++LP
Sbjct: 65 LDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR-DRLLNEGMILPVSLADAEKLP 123
Query: 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVY 350
F DN ++V L N T + ++YRVL+PGG + F + LE Y
Sbjct: 124 FPDNYFNLVSVAFGLRN---MTYKDAALKEMYRVLKPGGTLLVLEFSKIYKPLEGAY 177
>sp|Q5F9R9|UBIE_NEIG1 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
GN=ubiE PE=3 SV=1
Length = 245
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 241 LDIGGGVATFAVRMMERN-------ITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP 293
LDI GG + +R +T + +SM G + + ++P+ ++ +++LP
Sbjct: 65 LDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR-DRLLNEGMILPVSLADAEKLP 123
Query: 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVY 350
F DN ++V L N T + ++YRVL+PGG + F + LE Y
Sbjct: 124 FPDNYFNLVSVAFGLRN---MTYKDAALKEMYRVLKPGGTLLVLEFSKIYKPLEGAY 177
>sp|A8Z414|EBH_STAAT Extracellular matrix-binding protein ebh OS=Staphylococcus aureus
(strain USA300 / TCH1516) GN=ebh PE=4 SV=1
Length = 10421
Score = 35.0 bits (79), Expect = 0.91, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 43 LINPPGITIPTTTTASVSVSEGDSASVP--SEFLAFTSGQNLPFGFNTNFDSDTIYP 97
++ P T+ TA+V++++G S S+ ++ ++GQ +P G TN SD P
Sbjct: 1098 VVKPEYQTVNAAKTATVTIAKGQSFSIGDIKQYFTLSNGQPIPSGTFTNITSDRTIP 1154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,967,208
Number of Sequences: 539616
Number of extensions: 6878672
Number of successful extensions: 15263
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 15172
Number of HSP's gapped (non-prelim): 133
length of query: 392
length of database: 191,569,459
effective HSP length: 119
effective length of query: 273
effective length of database: 127,355,155
effective search space: 34767957315
effective search space used: 34767957315
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)