Query 047630
Match_columns 392
No_of_seqs 571 out of 2260
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 23:15:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047630.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047630hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e23_A Uncharacterized protein 99.7 1.7E-16 6E-21 144.1 16.3 160 224-391 33-205 (211)
2 3h2b_A SAM-dependent methyltra 99.7 4E-16 1.4E-20 140.7 16.3 140 222-368 31-183 (203)
3 4gek_A TRNA (CMO5U34)-methyltr 99.7 5.8E-16 2E-20 147.3 17.4 144 231-391 68-260 (261)
4 3dh0_A SAM dependent methyltra 99.7 4.9E-16 1.7E-20 141.5 15.3 151 221-389 26-194 (219)
5 1vl5_A Unknown conserved prote 99.7 4.7E-16 1.6E-20 145.9 15.4 138 221-367 26-190 (260)
6 3hnr_A Probable methyltransfer 99.7 3.1E-15 1.1E-19 136.3 19.4 153 221-391 34-215 (220)
7 3dlc_A Putative S-adenosyl-L-m 99.7 9.3E-16 3.2E-20 138.7 14.3 122 239-365 46-201 (219)
8 2p7i_A Hypothetical protein; p 99.7 9.2E-16 3.1E-20 141.3 14.5 137 221-366 30-198 (250)
9 3ujc_A Phosphoethanolamine N-m 99.7 2E-15 7E-20 140.9 16.8 143 222-367 41-206 (266)
10 1pjz_A Thiopurine S-methyltran 99.7 2.4E-16 8.3E-21 143.7 10.0 131 232-369 21-178 (203)
11 1y8c_A S-adenosylmethionine-de 99.7 1.7E-15 5.9E-20 139.6 15.4 146 239-388 40-245 (246)
12 1xxl_A YCGJ protein; structura 99.6 2E-15 6.7E-20 140.4 15.5 135 225-367 13-174 (239)
13 3pfg_A N-methyltransferase; N, 99.6 1.4E-15 4.8E-20 142.9 14.6 97 239-338 53-151 (263)
14 3sm3_A SAM-dependent methyltra 99.6 2.8E-15 9.5E-20 137.2 16.2 145 232-381 29-222 (235)
15 1p91_A Ribosomal RNA large sub 99.6 1.5E-16 5.1E-21 150.1 7.2 173 114-340 1-180 (269)
16 2p8j_A S-adenosylmethionine-de 99.6 3.9E-15 1.3E-19 134.4 16.0 164 221-390 11-206 (209)
17 3ou2_A SAM-dependent methyltra 99.6 5.3E-15 1.8E-19 134.0 16.8 139 221-366 34-204 (218)
18 3dli_A Methyltransferase; PSI- 99.6 1.3E-15 4.4E-20 141.4 13.0 128 233-368 41-185 (240)
19 3l8d_A Methyltransferase; stru 99.6 4.2E-15 1.5E-19 137.2 15.6 128 233-368 53-201 (242)
20 3cgg_A SAM-dependent methyltra 99.6 9.2E-15 3.2E-19 129.5 17.0 157 222-388 37-195 (195)
21 3e8s_A Putative SAM dependent 99.6 4.2E-15 1.4E-19 135.1 14.9 127 231-366 50-208 (227)
22 3g5l_A Putative S-adenosylmeth 99.6 5E-15 1.7E-19 138.1 15.8 125 238-367 46-216 (253)
23 3i9f_A Putative type 11 methyl 99.6 2.1E-15 7.2E-20 132.1 12.3 122 231-365 15-146 (170)
24 2o57_A Putative sarcosine dime 99.6 4.2E-15 1.4E-19 142.1 14.6 129 231-367 80-234 (297)
25 3bus_A REBM, methyltransferase 99.6 7.2E-15 2.5E-19 138.4 15.9 125 239-368 64-217 (273)
26 1xtp_A LMAJ004091AAA; SGPP, st 99.6 7.9E-15 2.7E-19 136.3 15.8 128 238-368 95-239 (254)
27 2xvm_A Tellurite resistance pr 99.6 5.3E-15 1.8E-19 132.1 13.6 153 227-388 26-199 (199)
28 3dtn_A Putative methyltransfer 99.6 1.4E-14 4.7E-19 133.4 16.5 141 221-365 28-212 (234)
29 3ege_A Putative methyltransfer 99.6 3.7E-15 1.3E-19 140.5 12.7 126 232-367 33-178 (261)
30 2gb4_A Thiopurine S-methyltran 99.6 1.5E-14 5E-19 136.9 16.4 129 233-368 68-228 (252)
31 1nkv_A Hypothetical protein YJ 99.6 5.6E-15 1.9E-19 137.7 12.7 127 231-366 34-186 (256)
32 3jwg_A HEN1, methyltransferase 99.6 2.9E-14 9.9E-19 130.1 17.1 151 229-388 25-210 (219)
33 3d2l_A SAM-dependent methyltra 99.6 2.8E-14 9.7E-19 131.5 17.2 110 221-337 20-136 (243)
34 3thr_A Glycine N-methyltransfe 99.6 1.2E-14 4.2E-19 138.4 15.2 111 223-338 47-175 (293)
35 4htf_A S-adenosylmethionine-de 99.6 1E-14 3.5E-19 138.7 14.6 125 239-368 71-233 (285)
36 3f4k_A Putative methyltransfer 99.6 5.7E-15 1.9E-19 137.8 12.5 123 239-367 49-196 (257)
37 4hg2_A Methyltransferase type 99.6 1.9E-15 6.5E-20 143.5 9.4 111 222-340 27-137 (257)
38 3vc1_A Geranyl diphosphate 2-C 99.6 5.4E-15 1.8E-19 143.0 12.4 123 239-367 120-269 (312)
39 3bkw_A MLL3908 protein, S-aden 99.6 1.1E-14 3.7E-19 134.3 13.6 135 225-367 35-214 (243)
40 3kkz_A Uncharacterized protein 99.6 8.8E-15 3E-19 137.9 12.6 124 239-368 49-197 (267)
41 2zfu_A Nucleomethylin, cerebra 99.6 2.4E-14 8.3E-19 130.2 15.1 123 221-365 55-177 (215)
42 1kpg_A CFA synthase;, cyclopro 99.6 3.3E-14 1.1E-18 135.2 16.6 123 239-367 67-228 (287)
43 3g2m_A PCZA361.24; SAM-depende 99.6 8.7E-15 3E-19 140.5 12.7 126 240-368 86-275 (299)
44 2ex4_A Adrenal gland protein A 99.6 1.7E-14 5.7E-19 133.9 14.2 127 239-368 82-226 (241)
45 3lcc_A Putative methyl chlorid 99.6 1.4E-14 4.7E-19 133.8 13.5 129 239-371 69-211 (235)
46 3ofk_A Nodulation protein S; N 99.6 2.6E-14 8.9E-19 130.0 15.0 145 238-390 53-207 (216)
47 3bxo_A N,N-dimethyltransferase 99.6 2.6E-14 8.9E-19 131.4 14.5 97 239-338 43-141 (239)
48 3ocj_A Putative exported prote 99.6 9.6E-15 3.3E-19 140.8 12.1 144 231-388 116-304 (305)
49 3ccf_A Cyclopropane-fatty-acyl 99.6 2.5E-14 8.6E-19 135.8 14.8 131 229-368 53-211 (279)
50 2yqz_A Hypothetical protein TT 99.6 2.8E-14 9.6E-19 133.1 14.7 121 239-365 42-194 (263)
51 2a14_A Indolethylamine N-methy 99.6 1E-14 3.6E-19 137.9 11.8 149 239-389 58-261 (263)
52 1vlm_A SAM-dependent methyltra 99.6 6.3E-14 2.1E-18 128.3 16.6 132 224-368 38-189 (219)
53 2kw5_A SLR1183 protein; struct 99.6 5.1E-14 1.8E-18 126.7 15.7 146 239-391 32-198 (202)
54 1ve3_A Hypothetical protein PH 99.6 8.1E-14 2.8E-18 127.1 17.2 142 221-367 25-215 (227)
55 3gu3_A Methyltransferase; alph 99.6 1.3E-14 4.5E-19 138.5 11.1 137 222-367 11-190 (284)
56 2i62_A Nicotinamide N-methyltr 99.5 5.3E-14 1.8E-18 131.4 14.8 151 238-390 58-263 (265)
57 3jwh_A HEN1; methyltransferase 99.5 4.6E-14 1.6E-18 128.7 14.0 131 229-365 25-190 (217)
58 3m70_A Tellurite resistance pr 99.5 7.5E-14 2.6E-18 132.8 15.5 157 222-388 110-286 (286)
59 3mgg_A Methyltransferase; NYSG 99.5 2.5E-14 8.5E-19 135.1 12.0 128 232-367 36-198 (276)
60 4fsd_A Arsenic methyltransfera 99.5 3.5E-14 1.2E-18 141.7 13.8 124 240-368 87-252 (383)
61 3hem_A Cyclopropane-fatty-acyl 99.5 1.2E-13 4E-18 132.7 16.7 124 239-367 75-243 (302)
62 2fk8_A Methoxy mycolic acid sy 99.5 9.5E-14 3.3E-18 134.2 14.8 123 239-367 93-254 (318)
63 3cc8_A Putative methyltransfer 99.5 8.8E-14 3E-18 126.6 13.3 124 239-368 35-186 (230)
64 3g07_A 7SK snRNA methylphospha 99.5 2.5E-14 8.5E-19 137.5 9.4 127 239-367 49-269 (292)
65 2p35_A Trans-aconitate 2-methy 99.5 1.3E-13 4.3E-18 128.5 13.9 120 240-365 37-188 (259)
66 1wzn_A SAM-dependent methyltra 99.5 4.4E-13 1.5E-17 124.7 17.2 96 239-337 44-144 (252)
67 2g72_A Phenylethanolamine N-me 99.5 1.5E-13 5.2E-18 131.1 13.8 128 239-368 74-257 (289)
68 1ri5_A MRNA capping enzyme; me 99.5 1.5E-13 5.1E-18 130.5 13.3 131 232-367 63-250 (298)
69 4e2x_A TCAB9; kijanose, tetron 99.5 5.4E-14 1.9E-18 141.3 10.0 140 222-367 93-253 (416)
70 3reo_A (ISO)eugenol O-methyltr 99.5 3.4E-13 1.2E-17 134.0 15.6 136 225-367 191-355 (368)
71 3dp7_A SAM-dependent methyltra 99.5 1.2E-13 4E-18 136.9 11.3 123 238-365 181-340 (363)
72 4a6d_A Hydroxyindole O-methylt 99.5 1.1E-12 3.7E-17 129.7 17.2 137 225-365 168-332 (353)
73 3mcz_A O-methyltransferase; ad 99.5 6.1E-13 2.1E-17 130.4 15.2 138 237-389 180-350 (352)
74 3p9c_A Caffeic acid O-methyltr 99.5 4.6E-13 1.6E-17 132.9 14.3 124 237-367 202-353 (364)
75 1zx0_A Guanidinoacetate N-meth 99.5 2.1E-13 7.2E-18 126.3 11.1 127 240-368 64-213 (236)
76 3i53_A O-methyltransferase; CO 99.5 5.4E-13 1.8E-17 130.0 13.7 125 236-366 169-320 (332)
77 3grz_A L11 mtase, ribosomal pr 99.4 7.6E-13 2.6E-17 119.5 13.1 118 232-365 59-183 (205)
78 1x19_A CRTF-related protein; m 99.4 2.1E-12 7.2E-17 127.3 17.0 124 238-367 192-348 (359)
79 2r3s_A Uncharacterized protein 99.4 1.3E-12 4.3E-17 126.9 15.0 122 239-365 168-321 (335)
80 3gwz_A MMCR; methyltransferase 99.4 1.8E-12 6.1E-17 128.7 16.2 136 225-366 191-355 (369)
81 3mti_A RRNA methylase; SAM-dep 99.4 1.5E-12 5E-17 115.6 13.9 132 232-368 21-170 (185)
82 2aot_A HMT, histamine N-methyl 99.4 4.2E-13 1.5E-17 128.5 11.2 126 239-367 55-221 (292)
83 3q87_B N6 adenine specific DNA 99.4 4E-12 1.4E-16 112.4 16.4 132 221-367 10-149 (170)
84 3bkx_A SAM-dependent methyltra 99.4 1.3E-12 4.6E-17 122.9 13.8 131 231-367 41-219 (275)
85 2ip2_A Probable phenazine-spec 99.4 1.9E-12 6.3E-17 126.1 15.2 123 238-366 169-321 (334)
86 2gs9_A Hypothetical protein TT 99.4 5.3E-13 1.8E-17 120.8 10.5 94 239-340 39-134 (211)
87 3lst_A CALO1 methyltransferase 99.4 1.6E-12 5.4E-17 127.8 14.7 125 237-366 185-335 (348)
88 2nxc_A L11 mtase, ribosomal pr 99.4 1.8E-12 6.2E-17 122.2 14.1 114 240-365 124-242 (254)
89 3m33_A Uncharacterized protein 99.4 4.1E-13 1.4E-17 123.7 9.3 128 222-367 35-167 (226)
90 2vdw_A Vaccinia virus capping 99.4 1.2E-12 4.2E-17 126.8 12.7 99 239-339 51-170 (302)
91 2avn_A Ubiquinone/menaquinone 99.4 7.7E-13 2.6E-17 124.3 11.0 97 239-339 57-153 (260)
92 1tw3_A COMT, carminomycin 4-O- 99.4 3.3E-12 1.1E-16 125.6 15.6 126 238-367 185-339 (360)
93 1qzz_A RDMB, aclacinomycin-10- 99.4 2.6E-12 8.7E-17 126.9 14.4 124 238-367 184-339 (374)
94 3ggd_A SAM-dependent methyltra 99.4 6.2E-13 2.1E-17 123.3 9.4 129 232-368 55-220 (245)
95 1fp1_D Isoliquiritigenin 2'-O- 99.4 1.3E-12 4.4E-17 129.6 12.3 124 238-366 211-359 (372)
96 2pxx_A Uncharacterized protein 99.4 3.7E-12 1.3E-16 114.7 14.0 128 222-359 30-175 (215)
97 3e05_A Precorrin-6Y C5,15-meth 99.4 5.5E-12 1.9E-16 113.9 14.6 118 229-360 36-161 (204)
98 3njr_A Precorrin-6Y methylase; 99.4 1.1E-11 3.6E-16 113.0 15.9 126 227-368 49-181 (204)
99 3g5t_A Trans-aconitate 3-methy 99.4 2E-12 7E-17 123.9 11.3 109 222-337 23-148 (299)
100 3orh_A Guanidinoacetate N-meth 99.4 4.1E-13 1.4E-17 125.2 6.2 123 232-362 59-205 (236)
101 1xdz_A Methyltransferase GIDB; 99.4 6.6E-12 2.3E-16 116.7 13.7 118 239-366 73-201 (240)
102 1ej0_A FTSJ; methyltransferase 99.4 7.7E-12 2.6E-16 108.3 13.0 137 239-388 25-180 (180)
103 1yzh_A TRNA (guanine-N(7)-)-me 99.3 7.7E-12 2.6E-16 114.0 13.5 121 239-365 44-180 (214)
104 3evz_A Methyltransferase; NYSG 99.3 1.5E-11 5.1E-16 112.8 15.5 127 232-365 54-204 (230)
105 2qe6_A Uncharacterized protein 99.3 4.6E-12 1.6E-16 121.0 11.9 102 237-341 78-199 (274)
106 3mq2_A 16S rRNA methyltransfer 99.3 3.8E-12 1.3E-16 116.0 10.6 129 231-368 25-185 (218)
107 1fbn_A MJ fibrillarin homologu 99.3 1.2E-11 4.2E-16 114.2 13.9 119 239-367 77-213 (230)
108 3hm2_A Precorrin-6Y C5,15-meth 99.3 1.1E-11 3.7E-16 108.6 12.8 117 239-368 28-154 (178)
109 3hp7_A Hemolysin, putative; st 99.3 2.3E-11 7.7E-16 117.5 16.1 138 239-387 88-249 (291)
110 1l3i_A Precorrin-6Y methyltran 99.3 5.9E-12 2E-16 111.0 10.8 119 228-361 28-154 (192)
111 1nt2_A Fibrillarin-like PRE-rR 99.3 2.3E-11 7.7E-16 111.6 14.7 124 232-367 56-195 (210)
112 1dus_A MJ0882; hypothetical pr 99.3 1.5E-11 5E-16 108.6 12.9 117 239-364 55-179 (194)
113 3eey_A Putative rRNA methylase 99.3 8.3E-12 2.8E-16 111.8 11.4 134 231-369 20-175 (197)
114 3lpm_A Putative methyltransfer 99.3 2.8E-11 9.6E-16 113.9 15.1 136 224-368 39-202 (259)
115 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.1E-11 3.8E-16 113.6 11.9 119 240-364 42-176 (213)
116 2ipx_A RRNA 2'-O-methyltransfe 99.3 1.3E-11 4.4E-16 114.0 12.4 121 239-367 80-217 (233)
117 2ld4_A Anamorsin; methyltransf 99.3 7.7E-12 2.6E-16 110.3 10.0 107 231-359 10-128 (176)
118 3iv6_A Putative Zn-dependent a 99.3 1.3E-11 4.4E-16 117.5 12.1 104 230-340 42-150 (261)
119 1fp2_A Isoflavone O-methyltran 99.3 7.6E-12 2.6E-16 123.0 10.8 122 238-366 190-340 (352)
120 3htx_A HEN1; HEN1, small RNA m 99.3 5E-11 1.7E-15 128.2 17.6 101 231-338 719-834 (950)
121 4df3_A Fibrillarin-like rRNA/T 99.3 1.7E-11 5.7E-16 114.8 11.9 127 231-367 75-217 (233)
122 2yxd_A Probable cobalt-precorr 99.3 4E-11 1.4E-15 105.0 12.7 118 229-364 31-154 (183)
123 1zg3_A Isoflavanone 4'-O-methy 99.3 1.1E-11 3.7E-16 122.2 10.0 121 239-366 196-346 (358)
124 3dmg_A Probable ribosomal RNA 99.3 2.6E-11 8.9E-16 121.3 12.8 113 221-338 216-340 (381)
125 3id6_C Fibrillarin-like rRNA/T 99.3 3.4E-11 1.2E-15 112.7 12.2 128 231-368 74-217 (232)
126 3p2e_A 16S rRNA methylase; met 99.3 3.8E-11 1.3E-15 111.3 12.5 127 240-368 28-186 (225)
127 3dou_A Ribosomal RNA large sub 99.2 2.5E-11 8.4E-16 109.8 10.3 141 232-388 24-183 (191)
128 3bgv_A MRNA CAP guanine-N7 met 99.2 2.2E-11 7.7E-16 117.4 10.5 99 239-339 37-156 (313)
129 3q7e_A Protein arginine N-meth 99.2 1.7E-11 5.7E-16 121.0 9.5 102 231-338 64-173 (349)
130 2fyt_A Protein arginine N-meth 99.2 3.3E-11 1.1E-15 118.6 11.2 100 231-336 62-169 (340)
131 2frn_A Hypothetical protein PH 99.2 6.8E-11 2.3E-15 112.9 13.1 119 232-363 124-253 (278)
132 3r0q_C Probable protein argini 99.2 3.3E-11 1.1E-15 120.1 11.3 96 239-338 66-169 (376)
133 2plw_A Ribosomal RNA methyltra 99.2 1.2E-10 4.1E-15 104.4 13.8 132 239-383 25-193 (201)
134 3opn_A Putative hemolysin; str 99.2 1.8E-11 6E-16 114.4 8.5 138 239-388 40-202 (232)
135 4dzr_A Protein-(glutamine-N5) 99.2 7.7E-12 2.6E-16 112.4 5.4 138 221-365 14-190 (215)
136 3p9n_A Possible methyltransfer 99.2 6.6E-11 2.3E-15 105.6 11.2 102 233-341 44-156 (189)
137 3g89_A Ribosomal RNA small sub 99.2 5.6E-11 1.9E-15 111.9 11.2 119 239-367 83-212 (249)
138 3gdh_A Trimethylguanosine synt 99.2 2.2E-12 7.4E-17 119.4 0.8 135 222-365 67-217 (241)
139 2b3t_A Protein methyltransfera 99.2 8.9E-11 3E-15 111.4 12.0 137 221-365 95-261 (276)
140 1ixk_A Methyltransferase; open 99.2 1.3E-10 4.4E-15 113.1 13.3 139 221-364 106-272 (315)
141 1g6q_1 HnRNP arginine N-methyl 99.2 6.5E-11 2.2E-15 115.7 11.0 103 229-337 34-144 (328)
142 1yb2_A Hypothetical protein TA 99.2 1E-10 3.4E-15 111.1 11.8 119 231-366 108-236 (275)
143 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1.1E-10 3.9E-15 108.5 11.9 119 229-363 92-220 (258)
144 3ckk_A TRNA (guanine-N(7)-)-me 99.2 5.7E-11 1.9E-15 110.9 9.6 119 239-362 49-190 (235)
145 3dxy_A TRNA (guanine-N(7)-)-me 99.2 2.5E-11 8.5E-16 112.0 6.0 118 239-362 37-172 (218)
146 3u81_A Catechol O-methyltransf 99.2 3.8E-10 1.3E-14 103.3 13.7 130 221-362 46-192 (221)
147 3uwp_A Histone-lysine N-methyl 99.1 3.5E-11 1.2E-15 121.0 7.2 103 231-342 171-292 (438)
148 1jsx_A Glucose-inhibited divis 99.1 2E-10 6.9E-15 103.4 11.5 110 240-365 69-186 (207)
149 1af7_A Chemotaxis receptor met 99.1 9.4E-11 3.2E-15 112.3 9.5 97 239-338 108-252 (274)
150 3lbf_A Protein-L-isoaspartate 99.1 1.3E-10 4.5E-15 105.0 9.6 97 229-339 73-175 (210)
151 3fpf_A Mtnas, putative unchara 99.1 1.2E-10 4.2E-15 112.6 9.8 99 228-339 117-223 (298)
152 2ift_A Putative methylase HI07 99.1 9.5E-11 3.2E-15 106.3 8.5 100 233-341 53-166 (201)
153 2bm8_A Cephalosporin hydroxyla 99.1 2E-10 6.9E-15 107.1 10.8 129 222-361 70-213 (236)
154 1o9g_A RRNA methyltransferase; 99.1 2.1E-10 7.3E-15 107.0 10.9 114 223-338 38-214 (250)
155 2nyu_A Putative ribosomal RNA 99.1 5.5E-10 1.9E-14 99.5 12.8 140 232-387 21-188 (196)
156 1g8a_A Fibrillarin-like PRE-rR 99.1 1.2E-09 4E-14 100.1 15.3 119 239-367 76-212 (227)
157 3tfw_A Putative O-methyltransf 99.1 3.5E-10 1.2E-14 106.0 11.5 110 221-341 51-173 (248)
158 2ozv_A Hypothetical protein AT 99.1 8.6E-10 2.9E-14 104.2 14.3 121 239-366 39-193 (260)
159 3mb5_A SAM-dependent methyltra 99.1 2E-10 7E-15 107.0 9.7 119 229-364 89-219 (255)
160 2esr_A Methyltransferase; stru 99.1 1.2E-10 4.2E-15 102.4 7.7 97 239-341 34-141 (177)
161 3sso_A Methyltransferase; macr 99.1 2.2E-10 7.5E-15 114.9 9.8 94 238-340 218-326 (419)
162 3ntv_A MW1564 protein; rossman 99.1 1.9E-10 6.5E-15 106.5 8.6 110 221-341 59-179 (232)
163 3bwc_A Spermidine synthase; SA 99.1 3.4E-10 1.2E-14 109.6 10.7 127 238-367 97-240 (304)
164 1vbf_A 231AA long hypothetical 99.1 1.5E-10 5.3E-15 106.1 7.5 96 230-339 67-166 (231)
165 2h00_A Methyltransferase 10 do 99.1 3.7E-10 1.3E-14 105.4 10.1 145 221-367 48-238 (254)
166 3bzb_A Uncharacterized protein 99.1 6.8E-10 2.3E-14 106.0 12.0 136 221-364 64-234 (281)
167 3duw_A OMT, O-methyltransferas 99.1 1E-09 3.5E-14 100.1 12.3 111 221-342 46-171 (223)
168 2igt_A SAM dependent methyltra 99.1 1.9E-09 6.3E-14 105.9 14.9 124 240-365 157-302 (332)
169 2y1w_A Histone-arginine methyl 99.1 3.6E-10 1.2E-14 111.3 9.9 99 231-337 48-154 (348)
170 3lec_A NADB-rossmann superfami 99.0 4.1E-09 1.4E-13 98.3 15.9 131 224-368 11-150 (230)
171 3tma_A Methyltransferase; thum 99.0 1.5E-09 5E-14 106.9 13.3 125 231-367 201-339 (354)
172 1i9g_A Hypothetical protein RV 99.0 8.6E-10 3E-14 104.1 11.2 118 230-363 96-226 (280)
173 3tr6_A O-methyltransferase; ce 99.0 4.8E-10 1.6E-14 102.3 8.8 110 221-341 52-177 (225)
174 2fpo_A Methylase YHHF; structu 99.0 4.3E-10 1.5E-14 102.0 8.4 99 233-340 54-162 (202)
175 2fhp_A Methylase, putative; al 99.0 2.8E-10 9.5E-15 100.4 6.9 97 239-341 47-157 (187)
176 1o54_A SAM-dependent O-methylt 99.0 1.6E-09 5.3E-14 102.8 12.4 119 230-365 109-237 (277)
177 2gpy_A O-methyltransferase; st 99.0 4.2E-10 1.5E-14 103.6 8.1 109 221-340 42-162 (233)
178 1sqg_A SUN protein, FMU protei 99.0 5E-09 1.7E-13 106.0 16.7 158 221-388 234-429 (429)
179 4dcm_A Ribosomal RNA large sub 99.0 6.4E-10 2.2E-14 111.0 9.8 98 238-338 224-334 (375)
180 3gnl_A Uncharacterized protein 99.0 5.4E-09 1.8E-13 98.4 15.6 131 224-368 11-150 (244)
181 2yxl_A PH0851 protein, 450AA l 99.0 3.9E-09 1.3E-13 107.6 15.5 137 221-363 247-415 (450)
182 1ws6_A Methyltransferase; stru 99.0 5.1E-10 1.7E-14 97.1 7.3 99 233-341 41-150 (171)
183 1dl5_A Protein-L-isoaspartate 99.0 5.3E-10 1.8E-14 108.5 7.9 96 229-338 71-175 (317)
184 2oxt_A Nucleoside-2'-O-methylt 99.0 6.3E-10 2.2E-14 105.9 8.0 95 239-340 77-187 (265)
185 2yxe_A Protein-L-isoaspartate 99.0 1E-09 3.6E-14 99.4 9.1 97 229-339 73-178 (215)
186 3c3p_A Methyltransferase; NP_9 99.0 6.9E-10 2.4E-14 100.6 7.8 108 221-340 44-162 (210)
187 2wa2_A Non-structural protein 99.0 5.8E-10 2E-14 106.8 7.6 95 239-340 85-195 (276)
188 3dr5_A Putative O-methyltransf 99.0 5.4E-10 1.8E-14 103.3 7.0 113 221-341 41-166 (221)
189 3giw_A Protein of unknown func 99.0 1.4E-09 4.8E-14 104.0 9.9 106 235-342 77-204 (277)
190 3kr9_A SAM-dependent methyltra 99.0 1.1E-08 3.9E-13 95.1 15.5 129 225-368 6-144 (225)
191 2pbf_A Protein-L-isoaspartate 99.0 7.5E-10 2.6E-14 101.3 7.1 95 231-339 78-194 (227)
192 3a27_A TYW2, uncharacterized p 99.0 4.3E-09 1.5E-13 100.1 12.5 99 231-342 117-223 (272)
193 2vdv_E TRNA (guanine-N(7)-)-me 99.0 1.4E-09 4.8E-14 101.4 8.8 115 239-359 52-191 (246)
194 3fzg_A 16S rRNA methylase; met 99.0 1.9E-09 6.5E-14 97.8 9.2 135 221-365 36-185 (200)
195 3r3h_A O-methyltransferase, SA 98.9 9.1E-10 3.1E-14 103.0 7.3 112 221-341 48-173 (242)
196 2p41_A Type II methyltransfera 98.9 8E-10 2.7E-14 107.3 7.0 99 239-341 85-194 (305)
197 2yvl_A TRMI protein, hypotheti 98.9 5.7E-09 2E-13 96.3 12.4 118 230-364 88-212 (248)
198 2xyq_A Putative 2'-O-methyl tr 98.9 8.6E-09 2.9E-13 99.4 13.9 117 231-365 61-195 (290)
199 2pjd_A Ribosomal RNA small sub 98.9 1E-09 3.5E-14 107.7 7.4 100 233-339 196-304 (343)
200 1u2z_A Histone-lysine N-methyl 98.9 2.6E-09 9E-14 108.4 10.5 103 231-342 240-363 (433)
201 3b3j_A Histone-arginine methyl 98.9 1.2E-09 4.2E-14 112.4 8.1 95 239-338 161-263 (480)
202 3m4x_A NOL1/NOP2/SUN family pr 98.9 3.2E-09 1.1E-13 108.5 11.1 138 221-363 93-259 (456)
203 3gjy_A Spermidine synthase; AP 98.9 9.4E-09 3.2E-13 100.3 13.8 122 239-364 92-225 (317)
204 2qm3_A Predicted methyltransfe 98.9 9.9E-09 3.4E-13 101.9 14.2 119 239-365 175-307 (373)
205 1i1n_A Protein-L-isoaspartate 98.9 1.6E-09 5.4E-14 99.0 7.8 95 231-339 75-183 (226)
206 3m6w_A RRNA methylase; rRNA me 98.9 3.3E-09 1.1E-13 108.6 10.9 137 222-363 90-255 (464)
207 3tm4_A TRNA (guanine N2-)-meth 98.9 1E-08 3.4E-13 102.0 14.0 124 231-367 215-352 (373)
208 1sui_A Caffeoyl-COA O-methyltr 98.9 1.8E-09 6E-14 101.4 7.8 109 221-340 67-192 (247)
209 4hc4_A Protein arginine N-meth 98.9 3.4E-09 1.2E-13 105.8 10.1 97 240-337 87-188 (376)
210 2hnk_A SAM-dependent O-methylt 98.9 1.8E-09 6.3E-14 100.0 7.7 108 222-340 49-183 (239)
211 1jg1_A PIMT;, protein-L-isoasp 98.9 1.7E-09 5.9E-14 99.9 7.4 97 228-339 86-190 (235)
212 3cbg_A O-methyltransferase; cy 98.9 4.8E-09 1.6E-13 97.1 9.9 108 223-341 62-185 (232)
213 1ne2_A Hypothetical protein TA 98.9 2.4E-08 8.3E-13 89.5 14.1 107 239-358 54-162 (200)
214 4azs_A Methyltransferase WBDD; 98.9 8E-10 2.7E-14 115.9 4.8 120 240-362 70-203 (569)
215 3ajd_A Putative methyltransfer 98.9 3.7E-09 1.3E-13 100.6 8.9 138 221-363 71-237 (274)
216 2b25_A Hypothetical protein; s 98.9 4.8E-09 1.6E-13 102.3 9.7 98 228-338 100-219 (336)
217 2avd_A Catechol-O-methyltransf 98.9 3.5E-09 1.2E-13 96.9 7.8 108 222-340 58-181 (229)
218 3adn_A Spermidine synthase; am 98.9 6.2E-08 2.1E-12 93.5 16.7 122 238-364 85-224 (294)
219 1wy7_A Hypothetical protein PH 98.9 5.6E-08 1.9E-12 87.3 15.3 116 239-365 52-173 (207)
220 1r18_A Protein-L-isoaspartate( 98.9 2.6E-09 8.9E-14 98.0 6.5 94 231-339 82-195 (227)
221 2o07_A Spermidine synthase; st 98.8 1.1E-08 3.7E-13 99.2 9.6 124 238-365 97-236 (304)
222 2yx1_A Hypothetical protein MJ 98.8 1.7E-08 6E-13 98.9 11.2 118 232-369 194-319 (336)
223 3k6r_A Putative transferase PH 98.8 3.1E-08 1.1E-12 95.0 12.2 117 232-361 124-251 (278)
224 1iy9_A Spermidine synthase; ro 98.8 4.3E-08 1.5E-12 93.5 13.0 123 238-364 77-215 (275)
225 2b78_A Hypothetical protein SM 98.8 1.9E-08 6.6E-13 100.5 10.8 128 232-364 211-359 (385)
226 2ih2_A Modification methylase 98.8 1.4E-07 5E-12 94.0 16.7 115 239-359 42-186 (421)
227 1inl_A Spermidine synthase; be 98.8 1.5E-08 5E-13 97.8 9.0 124 238-364 92-231 (296)
228 3c3y_A Pfomt, O-methyltransfer 98.8 1.7E-08 5.7E-13 93.9 8.7 108 221-339 58-182 (237)
229 2frx_A Hypothetical protein YE 98.8 3.6E-08 1.2E-12 101.4 12.0 133 221-358 103-266 (479)
230 2b2c_A Spermidine synthase; be 98.7 2.1E-08 7E-13 97.7 9.4 123 238-364 110-248 (314)
231 1nv8_A HEMK protein; class I a 98.7 1.8E-08 6.3E-13 96.5 8.8 113 221-340 108-251 (284)
232 1xj5_A Spermidine synthase 1; 98.7 4.5E-08 1.5E-12 96.1 11.5 97 238-337 122-234 (334)
233 2pt6_A Spermidine synthase; tr 98.7 1.2E-07 4E-12 92.6 14.4 123 238-364 118-256 (321)
234 3c0k_A UPF0064 protein YCCW; P 98.7 4.8E-08 1.6E-12 97.7 11.5 127 230-361 217-364 (396)
235 1uir_A Polyamine aminopropyltr 98.7 3.7E-08 1.3E-12 95.7 10.1 124 238-364 79-222 (314)
236 2i7c_A Spermidine synthase; tr 98.7 5.5E-08 1.9E-12 93.0 11.1 123 238-364 80-218 (283)
237 1zq9_A Probable dimethyladenos 98.7 3.3E-08 1.1E-12 94.7 9.3 90 239-334 31-143 (285)
238 2f8l_A Hypothetical protein LM 98.7 1.8E-07 6.2E-12 91.6 13.8 119 238-359 132-278 (344)
239 1mjf_A Spermidine synthase; sp 98.7 6.2E-08 2.1E-12 92.5 10.1 122 238-364 77-219 (281)
240 1wxx_A TT1595, hypothetical pr 98.7 4E-08 1.4E-12 97.8 8.4 120 239-360 212-349 (382)
241 1uwv_A 23S rRNA (uracil-5-)-me 98.7 3.1E-07 1E-11 93.1 14.9 148 221-387 271-431 (433)
242 4dmg_A Putative uncharacterize 98.6 2.1E-07 7.3E-12 93.3 13.2 123 234-361 215-351 (393)
243 2as0_A Hypothetical protein PH 98.6 6.5E-08 2.2E-12 96.7 9.0 122 233-359 217-358 (396)
244 3v97_A Ribosomal RNA large sub 98.6 7.5E-08 2.6E-12 103.4 9.4 122 230-360 536-675 (703)
245 2h1r_A Dimethyladenosine trans 98.6 1.1E-07 3.7E-12 91.8 8.8 74 229-309 38-117 (299)
246 1yub_A Ermam, rRNA methyltrans 98.5 1.7E-08 5.8E-13 94.2 1.7 94 239-337 32-144 (245)
247 3lcv_B Sisomicin-gentamicin re 98.5 3.3E-07 1.1E-11 86.9 10.4 135 221-362 119-267 (281)
248 2cmg_A Spermidine synthase; tr 98.5 1.2E-07 4E-12 90.0 7.1 113 238-364 74-197 (262)
249 2jjq_A Uncharacterized RNA met 98.5 5.2E-07 1.8E-11 91.4 11.8 105 221-338 278-387 (425)
250 3gru_A Dimethyladenosine trans 98.5 1.9E-07 6.6E-12 90.1 8.3 75 230-309 47-125 (295)
251 3evf_A RNA-directed RNA polyme 98.5 3.5E-07 1.2E-11 87.0 9.0 140 239-383 77-224 (277)
252 1qam_A ERMC' methyltransferase 98.5 1.9E-07 6.6E-12 87.3 6.8 83 223-308 17-104 (244)
253 3frh_A 16S rRNA methylase; met 98.5 6.2E-07 2.1E-11 84.1 10.0 108 222-338 94-206 (253)
254 3b5i_A S-adenosyl-L-methionine 98.4 6.8E-06 2.3E-10 81.8 15.6 52 289-340 141-227 (374)
255 2okc_A Type I restriction enzy 98.4 1.1E-06 3.8E-11 89.2 9.8 109 224-338 162-307 (445)
256 2qfm_A Spermine synthase; sper 98.3 2.4E-06 8.2E-11 84.6 10.3 126 236-364 188-339 (364)
257 3bt7_A TRNA (uracil-5-)-methyl 98.3 6.6E-06 2.3E-10 81.4 13.1 132 221-368 199-352 (369)
258 3fut_A Dimethyladenosine trans 98.3 1.5E-06 5.2E-11 82.8 7.9 75 229-309 43-121 (271)
259 3tqs_A Ribosomal RNA small sub 98.2 1.3E-06 4.5E-11 82.5 6.8 74 229-308 25-106 (255)
260 3ldu_A Putative methylase; str 98.2 3.2E-06 1.1E-10 84.4 9.1 96 240-338 199-344 (385)
261 3k0b_A Predicted N6-adenine-sp 98.2 3.7E-06 1.3E-10 84.2 9.3 96 240-338 205-350 (393)
262 4auk_A Ribosomal RNA large sub 98.2 4E-05 1.4E-09 75.9 16.4 143 232-390 210-357 (375)
263 2efj_A 3,7-dimethylxanthine me 98.2 3.2E-05 1.1E-09 77.2 15.7 130 239-368 55-293 (384)
264 3ldg_A Putative uncharacterize 98.1 7.6E-06 2.6E-10 81.7 10.1 97 240-339 198-344 (384)
265 2b9e_A NOL1/NOP2/SUN domain fa 98.1 2E-05 6.7E-10 76.4 12.2 136 221-362 90-260 (309)
266 1m6e_X S-adenosyl-L-methionnin 98.0 5.1E-05 1.7E-09 75.1 12.5 99 240-339 55-210 (359)
267 2r6z_A UPF0341 protein in RSP 98.0 6.3E-06 2.2E-10 77.8 5.6 82 224-310 74-173 (258)
268 2ar0_A M.ecoki, type I restric 98.0 4.8E-05 1.6E-09 79.2 12.6 111 223-338 159-312 (541)
269 3ftd_A Dimethyladenosine trans 97.9 3E-05 1E-09 72.8 9.7 67 240-308 35-105 (249)
270 3gcz_A Polyprotein; flavivirus 97.9 1E-05 3.5E-10 77.0 6.4 138 239-383 93-241 (282)
271 3uzu_A Ribosomal RNA small sub 97.9 7.8E-06 2.7E-10 78.1 5.2 75 229-308 38-124 (279)
272 2dul_A N(2),N(2)-dimethylguano 97.9 1.2E-05 4.1E-10 80.1 5.7 94 233-338 47-164 (378)
273 4gqb_A Protein arginine N-meth 97.9 2.2E-05 7.4E-10 83.1 7.7 96 235-335 356-464 (637)
274 2qy6_A UPF0209 protein YFCK; s 97.8 3.5E-05 1.2E-09 72.7 7.9 73 282-363 152-231 (257)
275 3v97_A Ribosomal RNA large sub 97.8 6.1E-05 2.1E-09 80.8 10.1 97 240-338 194-347 (703)
276 3axs_A Probable N(2),N(2)-dime 97.7 2.3E-05 7.9E-10 78.5 4.9 90 240-338 56-158 (392)
277 3ua3_A Protein arginine N-meth 97.7 2.9E-05 9.9E-10 82.5 5.9 98 237-335 410-531 (745)
278 1qyr_A KSGA, high level kasuga 97.7 3E-05 1E-09 72.9 4.8 73 229-308 17-100 (252)
279 2oyr_A UPF0341 protein YHIQ; a 97.6 2.6E-05 8.8E-10 73.8 3.9 100 224-332 77-194 (258)
280 3khk_A Type I restriction-modi 97.6 0.00041 1.4E-08 72.2 13.3 118 239-358 247-418 (544)
281 3lkd_A Type I restriction-modi 97.6 0.00077 2.6E-08 70.1 14.7 117 239-358 224-380 (542)
282 2px2_A Genome polyprotein [con 97.6 5.3E-05 1.8E-09 71.3 5.3 143 231-383 71-223 (269)
283 3eld_A Methyltransferase; flav 97.5 0.00027 9.2E-09 67.7 9.3 139 238-382 83-230 (300)
284 2k4m_A TR8_protein, UPF0146 pr 97.5 0.00044 1.5E-08 59.8 9.3 87 232-341 34-124 (153)
285 1m6y_A S-adenosyl-methyltransf 97.5 7.4E-05 2.5E-09 72.1 4.5 81 221-307 15-107 (301)
286 3cvo_A Methyltransferase-like 97.4 0.00034 1.2E-08 63.7 8.1 90 238-339 32-155 (202)
287 3ll7_A Putative methyltransfer 97.3 9.9E-05 3.4E-09 74.2 3.8 66 240-307 97-172 (410)
288 4fzv_A Putative methyltransfer 97.3 0.001 3.5E-08 65.7 10.9 131 221-356 136-302 (359)
289 2wk1_A NOVP; transferase, O-me 97.2 0.0018 6E-08 61.9 11.2 128 224-360 97-265 (282)
290 3s1s_A Restriction endonucleas 97.2 0.0046 1.6E-07 66.8 14.5 117 239-357 324-487 (878)
291 3r24_A NSP16, 2'-O-methyl tran 97.1 0.003 1E-07 60.5 11.0 136 233-388 109-259 (344)
292 3o4f_A Spermidine synthase; am 96.9 0.0055 1.9E-07 58.8 11.2 124 236-364 83-224 (294)
293 3lkz_A Non-structural protein 96.9 0.0014 4.7E-08 62.8 6.8 116 239-358 97-224 (321)
294 3p8z_A Mtase, non-structural p 96.7 0.005 1.7E-07 57.3 8.3 120 231-358 76-206 (267)
295 3c6k_A Spermine synthase; sper 96.6 0.0093 3.2E-07 59.2 10.1 124 237-363 206-355 (381)
296 3vyw_A MNMC2; tRNA wobble urid 96.1 0.035 1.2E-06 53.5 11.2 75 283-365 169-246 (308)
297 1wg8_A Predicted S-adenosylmet 95.8 0.01 3.5E-07 56.6 5.9 79 221-305 11-96 (285)
298 2zig_A TTHA0409, putative modi 95.7 0.024 8.1E-07 54.0 8.0 82 282-363 22-132 (297)
299 3ufb_A Type I restriction-modi 95.7 0.039 1.3E-06 57.1 10.2 139 221-365 205-390 (530)
300 1g55_A DNA cytosine methyltran 95.6 0.11 3.8E-06 50.5 12.4 142 239-384 4-167 (343)
301 3g7u_A Cytosine-specific methy 95.3 0.26 8.7E-06 48.7 14.1 141 240-383 5-169 (376)
302 1rjd_A PPM1P, carboxy methyl t 95.3 0.15 5E-06 49.6 12.1 102 237-341 98-235 (334)
303 3ubt_Y Modification methylase 95.0 0.79 2.7E-05 43.5 16.4 138 240-383 3-160 (331)
304 2c7p_A Modification methylase 94.8 0.32 1.1E-05 47.0 12.9 140 239-383 13-170 (327)
305 2zig_A TTHA0409, putative modi 94.5 0.033 1.1E-06 53.0 5.0 47 223-274 223-271 (297)
306 1boo_A Protein (N-4 cytosine-s 94.3 0.11 3.7E-06 50.1 8.1 82 282-363 15-116 (323)
307 3qv2_A 5-cytosine DNA methyltr 93.7 0.9 3.1E-05 43.9 13.4 140 239-383 12-177 (327)
308 3two_A Mannitol dehydrogenase; 92.5 0.31 1.1E-05 46.8 8.2 92 230-339 173-266 (348)
309 2vz8_A Fatty acid synthase; tr 92.1 0.051 1.7E-06 65.9 2.4 95 239-338 1243-1348(2512)
310 4h0n_A DNMT2; SAH binding, tra 91.7 1.5 5.2E-05 42.3 12.0 140 240-383 6-166 (333)
311 1f8f_A Benzyl alcohol dehydrog 91.6 0.26 8.8E-06 47.9 6.4 95 231-339 188-290 (371)
312 3pvc_A TRNA 5-methylaminomethy 91.4 1 3.5E-05 47.6 11.3 63 296-365 169-231 (689)
313 1i4w_A Mitochondrial replicati 90.5 0.36 1.2E-05 47.3 6.2 52 239-292 61-117 (353)
314 3ps9_A TRNA 5-methylaminomethy 90.4 1.3 4.3E-05 46.7 10.8 62 296-365 177-239 (676)
315 1g60_A Adenine-specific methyl 90.3 0.91 3.1E-05 41.9 8.5 83 283-369 6-101 (260)
316 2dph_A Formaldehyde dismutase; 89.9 0.58 2E-05 45.9 7.2 104 229-338 181-299 (398)
317 3fpc_A NADP-dependent alcohol 89.5 0.8 2.7E-05 44.0 7.7 97 228-338 161-266 (352)
318 1pl8_A Human sorbitol dehydrog 89.5 0.92 3.1E-05 43.7 8.2 96 229-338 167-273 (356)
319 4ej6_A Putative zinc-binding d 89.4 1 3.5E-05 43.8 8.5 98 228-339 177-285 (370)
320 1g60_A Adenine-specific methyl 89.2 0.5 1.7E-05 43.7 5.9 42 223-267 200-243 (260)
321 1e3j_A NADP(H)-dependent ketos 89.1 1.3 4.6E-05 42.4 9.0 96 229-338 164-271 (352)
322 1pqw_A Polyketide synthase; ro 88.3 0.55 1.9E-05 40.9 5.2 92 231-339 36-138 (198)
323 2oo3_A Protein involved in cat 87.9 7.5 0.00026 36.7 13.0 138 221-368 80-227 (283)
324 1uuf_A YAHK, zinc-type alcohol 87.8 0.8 2.7E-05 44.5 6.5 92 230-338 191-288 (369)
325 1eg2_A Modification methylase 87.8 1.7 5.8E-05 41.7 8.7 80 283-363 40-136 (319)
326 3s2e_A Zinc-containing alcohol 87.8 0.87 3E-05 43.4 6.6 95 230-338 163-263 (340)
327 3uko_A Alcohol dehydrogenase c 86.2 1.6 5.4E-05 42.3 7.6 95 230-338 190-295 (378)
328 2uyo_A Hypothetical protein ML 85.9 5.8 0.0002 37.8 11.3 100 237-341 103-221 (310)
329 2jhf_A Alcohol dehydrogenase E 85.7 2.3 7.9E-05 41.1 8.5 94 231-338 189-293 (374)
330 1p0f_A NADP-dependent alcohol 85.7 2.4 8.1E-05 41.0 8.5 95 230-338 188-293 (373)
331 3gms_A Putative NADPH:quinone 85.7 0.98 3.3E-05 43.1 5.7 94 231-339 142-244 (340)
332 1cdo_A Alcohol dehydrogenase; 85.6 2.5 8.6E-05 40.8 8.7 94 231-338 190-294 (374)
333 3uog_A Alcohol dehydrogenase; 85.1 1.1 3.8E-05 43.2 5.9 94 231-339 187-288 (363)
334 2fzw_A Alcohol dehydrogenase c 84.5 2.6 9E-05 40.5 8.3 94 231-338 188-292 (373)
335 3goh_A Alcohol dehydrogenase, 84.5 0.86 3E-05 43.0 4.6 87 231-337 140-228 (315)
336 1e3i_A Alcohol dehydrogenase, 83.6 3.5 0.00012 39.8 8.7 94 231-338 193-297 (376)
337 2hwk_A Helicase NSP2; rossman 83.4 5.9 0.0002 37.6 9.6 85 296-385 204-296 (320)
338 1kol_A Formaldehyde dehydrogen 83.3 4 0.00014 39.7 9.1 100 230-338 182-300 (398)
339 4b7c_A Probable oxidoreductase 83.3 1.2 4.3E-05 42.2 5.3 94 230-338 146-248 (336)
340 3me5_A Cytosine-specific methy 83.2 11 0.00037 38.2 12.5 122 239-362 90-255 (482)
341 3jyn_A Quinone oxidoreductase; 82.8 1.5 5E-05 41.6 5.5 93 232-339 139-240 (325)
342 1piw_A Hypothetical zinc-type 82.7 1.9 6.4E-05 41.5 6.3 95 230-337 176-275 (360)
343 3tka_A Ribosomal RNA small sub 82.7 1.2 4E-05 43.5 4.7 72 231-308 55-138 (347)
344 2b5w_A Glucose dehydrogenase; 82.7 3.1 0.0001 39.9 7.8 94 229-339 162-274 (357)
345 2c0c_A Zinc binding alcohol de 82.5 2.4 8.1E-05 40.9 7.0 95 230-339 160-262 (362)
346 1rjw_A ADH-HT, alcohol dehydro 82.1 4.4 0.00015 38.5 8.7 93 230-338 161-261 (339)
347 3qwb_A Probable quinone oxidor 81.8 1.9 6.5E-05 40.9 5.9 92 232-338 147-247 (334)
348 4eye_A Probable oxidoreductase 81.3 2.1 7.1E-05 40.9 6.0 92 231-338 157-257 (342)
349 1v3u_A Leukotriene B4 12- hydr 81.1 1.6 5.5E-05 41.4 5.1 91 231-338 143-244 (333)
350 3tos_A CALS11; methyltransfera 80.8 5.5 0.00019 37.0 8.5 75 282-361 160-241 (257)
351 2h6e_A ADH-4, D-arabinose 1-de 80.6 1.5 5.2E-05 41.8 4.8 93 230-338 168-269 (344)
352 1jvb_A NAD(H)-dependent alcoho 80.5 1.7 5.9E-05 41.5 5.1 95 230-338 167-271 (347)
353 2eih_A Alcohol dehydrogenase; 80.1 3.3 0.00011 39.4 7.0 86 239-338 169-265 (343)
354 3trk_A Nonstructural polyprote 79.9 2.2 7.7E-05 40.1 5.3 85 292-381 205-297 (324)
355 2d8a_A PH0655, probable L-thre 78.8 3.7 0.00013 39.2 6.9 92 233-338 167-267 (348)
356 1iz0_A Quinone oxidoreductase; 78.7 1.8 6.1E-05 40.4 4.5 92 231-338 123-218 (302)
357 2hcy_A Alcohol dehydrogenase 1 78.7 2.6 8.8E-05 40.2 5.7 92 231-338 167-269 (347)
358 3jv7_A ADH-A; dehydrogenase, n 78.1 3 0.0001 39.7 6.0 94 230-338 168-270 (345)
359 3fwz_A Inner membrane protein 77.6 10 0.00034 31.0 8.4 105 241-361 11-121 (140)
360 1vj0_A Alcohol dehydrogenase, 77.6 3.8 0.00013 39.7 6.6 95 231-339 193-299 (380)
361 3m6i_A L-arabinitol 4-dehydrog 77.5 7.1 0.00024 37.3 8.5 98 228-339 174-284 (363)
362 2j3h_A NADP-dependent oxidored 77.5 2.6 9E-05 40.0 5.4 92 231-338 153-255 (345)
363 4dcm_A Ribosomal RNA large sub 76.5 8.4 0.00029 37.5 8.8 104 221-339 25-137 (375)
364 1xa0_A Putative NADPH dependen 76.5 3.7 0.00013 38.7 6.1 87 240-338 153-246 (328)
365 1qor_A Quinone oxidoreductase; 76.4 3.2 0.00011 39.1 5.6 87 239-338 143-239 (327)
366 3ip1_A Alcohol dehydrogenase, 76.3 6.7 0.00023 38.3 8.1 98 232-338 212-318 (404)
367 4dkj_A Cytosine-specific methy 76.0 48 0.0016 32.6 14.2 55 328-384 176-236 (403)
368 3swr_A DNA (cytosine-5)-methyl 76.0 27 0.00093 38.7 13.4 140 239-383 542-719 (1002)
369 4gua_A Non-structural polyprot 75.8 5.2 0.00018 41.4 7.1 84 292-381 216-307 (670)
370 4dvj_A Putative zinc-dependent 75.6 9.5 0.00032 36.6 8.8 87 239-337 174-269 (363)
371 3nx4_A Putative oxidoreductase 75.3 5.2 0.00018 37.5 6.7 87 240-338 150-241 (324)
372 2cdc_A Glucose dehydrogenase g 75.3 5.7 0.00019 38.1 7.1 89 234-339 181-279 (366)
373 3tqh_A Quinone oxidoreductase; 75.2 4.5 0.00015 38.0 6.3 93 229-337 148-244 (321)
374 2qrv_A DNA (cytosine-5)-methyl 75.0 15 0.00053 34.6 9.9 68 239-306 18-91 (295)
375 3fbg_A Putative arginate lyase 74.6 5.5 0.00019 37.9 6.8 90 233-337 150-247 (346)
376 1yb5_A Quinone oxidoreductase; 74.5 3 0.0001 40.0 4.9 84 240-337 174-268 (351)
377 3iei_A Leucine carboxyl methyl 73.3 66 0.0023 30.8 14.4 139 221-364 77-278 (334)
378 3gqv_A Enoyl reductase; medium 73.2 11 0.00037 36.3 8.6 86 240-337 168-262 (371)
379 3krt_A Crotonyl COA reductase; 72.2 4.5 0.00016 40.2 5.7 92 232-338 227-344 (456)
380 2j8z_A Quinone oxidoreductase; 71.8 5.7 0.00019 38.0 6.1 87 240-339 166-262 (354)
381 1wly_A CAAR, 2-haloacrylate re 71.2 6.2 0.00021 37.2 6.2 85 240-338 149-244 (333)
382 3ggo_A Prephenate dehydrogenas 71.2 26 0.00087 33.1 10.5 88 238-335 34-125 (314)
383 4dup_A Quinone oxidoreductase; 70.8 4.3 0.00015 38.8 5.0 93 231-338 165-265 (353)
384 4ft4_B DNA (cytosine-5)-methyl 70.4 67 0.0023 34.1 14.7 61 321-383 416-482 (784)
385 2zb4_A Prostaglandin reductase 70.1 9.7 0.00033 36.2 7.4 93 230-338 155-260 (357)
386 4a0s_A Octenoyl-COA reductase/ 69.5 7.8 0.00027 38.3 6.7 93 231-338 218-336 (447)
387 2km1_A Protein DRE2; yeast, an 69.4 3.4 0.00012 34.8 3.4 43 293-336 54-96 (136)
388 1tt7_A YHFP; alcohol dehydroge 68.9 6.6 0.00022 36.9 5.8 87 240-338 154-247 (330)
389 2cf5_A Atccad5, CAD, cinnamyl 68.7 5.2 0.00018 38.3 5.1 94 231-338 177-275 (357)
390 3av4_A DNA (cytosine-5)-methyl 67.7 1.3E+02 0.0043 34.5 16.6 140 239-383 853-1030(1330)
391 2f1k_A Prephenate dehydrogenas 67.6 33 0.0011 31.1 10.2 83 241-335 4-88 (279)
392 3ius_A Uncharacterized conserv 67.3 62 0.0021 28.9 12.0 64 240-310 8-75 (286)
393 4a2c_A Galactitol-1-phosphate 66.8 17 0.00058 34.2 8.3 97 230-340 157-262 (346)
394 2zwa_A Leucine carboxyl methyl 66.7 67 0.0023 33.6 13.6 140 221-364 92-306 (695)
395 1yqd_A Sinapyl alcohol dehydro 62.7 8.1 0.00028 37.1 5.2 92 233-338 187-282 (366)
396 2dq4_A L-threonine 3-dehydroge 62.7 5.8 0.0002 37.6 4.1 89 233-338 164-262 (343)
397 1boo_A Protein (N-4 cytosine-s 62.4 10 0.00036 36.0 5.8 38 240-279 256-293 (323)
398 4eez_A Alcohol dehydrogenase 1 62.1 25 0.00084 33.0 8.4 95 230-338 160-263 (348)
399 1zsy_A Mitochondrial 2-enoyl t 61.1 26 0.00089 33.2 8.5 93 231-337 165-269 (357)
400 3g0o_A 3-hydroxyisobutyrate de 60.9 83 0.0029 28.9 11.8 110 241-363 11-125 (303)
401 1wg8_A Predicted S-adenosylmet 60.0 4.5 0.00015 38.3 2.7 43 315-360 210-252 (285)
402 3gaz_A Alcohol dehydrogenase s 59.5 9.2 0.00032 36.3 4.9 89 231-337 148-245 (343)
403 3llv_A Exopolyphosphatase-rela 57.9 65 0.0022 25.6 9.3 103 241-360 10-118 (141)
404 2vn8_A Reticulon-4-interacting 57.7 18 0.0006 34.7 6.6 88 240-338 187-280 (375)
405 3eag_A UDP-N-acetylmuramate:L- 54.8 1.4E+02 0.0047 27.9 13.0 67 240-309 7-77 (326)
406 2g5c_A Prephenate dehydrogenas 53.8 79 0.0027 28.5 10.2 86 240-336 4-94 (281)
407 3hn7_A UDP-N-acetylmuramate-L- 52.4 83 0.0028 31.8 10.9 65 241-309 23-91 (524)
408 3c85_A Putative glutathione-re 52.1 52 0.0018 27.6 8.1 88 241-337 43-138 (183)
409 1eg2_A Modification methylase 52.0 17 0.00059 34.5 5.4 43 222-267 229-273 (319)
410 3dmg_A Probable ribosomal RNA 51.2 25 0.00087 34.1 6.6 94 239-340 48-141 (381)
411 3pdk_A Phosphoglucosamine muta 50.0 1.8E+02 0.006 29.0 12.8 48 221-268 177-228 (469)
412 1gu7_A Enoyl-[acyl-carrier-pro 49.2 18 0.00062 34.3 5.1 95 231-338 164-275 (364)
413 2py6_A Methyltransferase FKBM; 49.1 12 0.00041 36.8 3.9 33 239-273 229-265 (409)
414 3l9w_A Glutathione-regulated p 48.5 38 0.0013 33.3 7.4 89 241-338 8-102 (413)
415 4had_A Probable oxidoreductase 47.6 46 0.0016 31.2 7.7 65 237-305 24-93 (350)
416 3pi7_A NADH oxidoreductase; gr 46.9 13 0.00044 35.3 3.6 80 247-338 177-263 (349)
417 3l4b_C TRKA K+ channel protien 46.4 74 0.0025 27.5 8.4 87 241-337 4-98 (218)
418 4a27_A Synaptic vesicle membra 45.0 20 0.00067 34.0 4.6 90 231-338 140-238 (349)
419 3tka_A Ribosomal RNA small sub 44.2 11 0.00038 36.5 2.6 32 315-346 251-282 (347)
420 3c24_A Putative oxidoreductase 43.7 1E+02 0.0034 28.0 9.2 82 240-335 14-98 (286)
421 2ew2_A 2-dehydropantoate 2-red 42.3 1.7E+02 0.0057 26.4 10.5 88 240-336 6-106 (316)
422 3slk_A Polyketide synthase ext 41.9 29 0.00099 37.3 5.7 88 232-338 344-442 (795)
423 3qha_A Putative oxidoreductase 41.9 1.1E+02 0.0038 28.0 9.2 107 241-362 19-127 (296)
424 3u3x_A Oxidoreductase; structu 41.0 85 0.0029 29.8 8.5 62 241-305 30-95 (361)
425 4hp8_A 2-deoxy-D-gluconate 3-d 40.7 1.2E+02 0.004 27.7 8.9 70 240-309 12-90 (247)
426 1p5d_X PMM, phosphomannomutase 40.6 2.6E+02 0.0088 27.6 12.2 133 220-369 155-309 (463)
427 1lss_A TRK system potassium up 40.5 1.3E+02 0.0043 23.3 11.3 104 240-360 7-117 (140)
428 3ond_A Adenosylhomocysteinase; 40.4 70 0.0024 32.4 7.9 83 240-339 268-353 (488)
429 3k6j_A Protein F01G10.3, confi 39.8 2.1E+02 0.0072 28.5 11.4 91 235-335 52-163 (460)
430 2h78_A Hibadh, 3-hydroxyisobut 39.8 1.4E+02 0.0049 27.1 9.6 109 240-362 6-119 (302)
431 4e21_A 6-phosphogluconate dehy 39.0 1.3E+02 0.0043 28.9 9.3 112 241-364 26-139 (358)
432 2f7l_A 455AA long hypothetical 38.1 2.3E+02 0.008 27.8 11.5 132 221-369 152-310 (455)
433 1m6y_A S-adenosyl-methyltransf 36.0 16 0.00054 34.5 2.2 32 315-346 222-253 (301)
434 3hwr_A 2-dehydropantoate 2-red 35.9 1.7E+02 0.0059 27.0 9.6 85 241-336 23-118 (318)
435 3b1f_A Putative prephenate deh 35.5 1.9E+02 0.0067 25.9 9.8 85 240-335 9-98 (290)
436 4eso_A Putative oxidoreductase 35.1 76 0.0026 28.3 6.7 97 240-338 11-138 (255)
437 2cvz_A Dehydrogenase, 3-hydrox 34.5 2E+02 0.0069 25.6 9.6 105 241-361 5-111 (289)
438 4a7p_A UDP-glucose dehydrogena 34.0 1.7E+02 0.0058 29.0 9.6 115 235-358 7-147 (446)
439 3ce6_A Adenosylhomocysteinase; 33.9 53 0.0018 33.3 5.9 91 232-341 272-364 (494)
440 3pef_A 6-phosphogluconate dehy 32.9 1.5E+02 0.0052 26.7 8.6 108 241-362 5-117 (287)
441 4gbj_A 6-phosphogluconate dehy 32.5 1.1E+02 0.0039 28.2 7.6 110 241-364 9-121 (297)
442 3p2y_A Alanine dehydrogenase/p 32.3 30 0.001 34.0 3.6 91 239-335 186-299 (381)
443 1wqa_A Phospho-sugar mutase; a 32.1 2.7E+02 0.0092 27.3 10.7 132 221-369 154-310 (455)
444 4dll_A 2-hydroxy-3-oxopropiona 31.6 2.6E+02 0.0089 25.8 10.1 109 240-362 34-146 (320)
445 2aef_A Calcium-gated potassium 31.5 2.1E+02 0.0072 24.8 9.0 84 241-337 13-104 (234)
446 4e12_A Diketoreductase; oxidor 31.0 1.1E+02 0.0038 27.8 7.3 88 238-335 5-118 (283)
447 4ezb_A Uncharacterized conserv 30.9 3.2E+02 0.011 25.2 11.2 108 241-363 28-144 (317)
448 3oig_A Enoyl-[acyl-carrier-pro 30.7 2.6E+02 0.0087 24.6 9.6 98 239-338 9-147 (266)
449 1lnq_A MTHK channels, potassiu 30.2 2.1E+02 0.007 26.5 9.1 85 240-337 118-210 (336)
450 3ojo_A CAP5O; rossmann fold, c 30.2 3E+02 0.01 27.1 10.6 115 241-359 15-149 (431)
451 3doj_A AT3G25530, dehydrogenas 29.6 1.7E+02 0.0059 26.8 8.4 109 240-362 24-137 (310)
452 3ek2_A Enoyl-(acyl-carrier-pro 29.5 2.4E+02 0.0083 24.6 9.2 100 239-338 16-153 (271)
453 3pdu_A 3-hydroxyisobutyrate de 29.1 1.3E+02 0.0044 27.3 7.3 108 241-362 5-117 (287)
454 3v2g_A 3-oxoacyl-[acyl-carrier 29.0 2.6E+02 0.0089 24.9 9.4 98 240-338 34-165 (271)
455 1zcj_A Peroxisomal bifunctiona 28.9 2.9E+02 0.01 27.1 10.4 90 236-335 36-147 (463)
456 2zyd_A 6-phosphogluconate dehy 28.9 1.7E+02 0.0059 29.1 8.7 114 241-363 19-136 (480)
457 3tri_A Pyrroline-5-carboxylate 28.7 1.1E+02 0.0037 28.0 6.7 81 241-334 7-94 (280)
458 4hv4_A UDP-N-acetylmuramate--L 28.5 3.4E+02 0.012 26.9 10.9 67 237-309 22-92 (494)
459 3ijr_A Oxidoreductase, short c 28.3 2.3E+02 0.0079 25.6 9.0 98 240-338 50-182 (291)
460 3rc1_A Sugar 3-ketoreductase; 28.3 2.3E+02 0.0079 26.5 9.2 61 241-305 31-96 (350)
461 1pjc_A Protein (L-alanine dehy 27.9 31 0.0011 33.1 2.9 95 238-337 168-266 (361)
462 1id1_A Putative potassium chan 27.7 2.4E+02 0.0081 22.6 9.2 87 241-337 7-104 (153)
463 3k31_A Enoyl-(acyl-carrier-pro 27.1 2.8E+02 0.0096 25.1 9.3 100 239-338 32-168 (296)
464 3pxx_A Carveol dehydrogenase; 26.9 1.7E+02 0.0059 26.0 7.7 100 239-338 12-153 (287)
465 1bg6_A N-(1-D-carboxylethyl)-L 26.8 1.2E+02 0.0043 28.0 6.9 87 240-337 7-108 (359)
466 2p2s_A Putative oxidoreductase 26.8 1.4E+02 0.0049 27.6 7.3 62 241-305 8-73 (336)
467 1vpd_A Tartronate semialdehyde 26.7 2.3E+02 0.008 25.4 8.7 109 240-362 8-121 (299)
468 1txg_A Glycerol-3-phosphate de 26.5 1.5E+02 0.005 27.2 7.3 88 241-335 4-101 (335)
469 4gwg_A 6-phosphogluconate dehy 26.0 2.9E+02 0.01 27.6 9.8 115 241-364 8-127 (484)
470 2g1u_A Hypothetical protein TM 25.7 1.4E+02 0.005 24.1 6.4 104 241-360 23-133 (155)
471 3dfz_A SIRC, precorrin-2 dehyd 25.2 1.5E+02 0.005 26.6 6.7 66 234-305 31-98 (223)
472 3is3_A 17BETA-hydroxysteroid d 25.2 2.9E+02 0.0098 24.5 8.9 99 240-339 21-153 (270)
473 3uw2_A Phosphoglucomutase/phos 24.6 5.3E+02 0.018 25.6 13.4 48 220-267 177-227 (485)
474 3d1l_A Putative NADP oxidoredu 24.1 2.7E+02 0.0093 24.5 8.5 82 241-335 14-99 (266)
475 3uuw_A Putative oxidoreductase 23.8 1.1E+02 0.0038 28.0 5.8 103 241-358 10-117 (308)
476 3ged_A Short-chain dehydrogena 23.2 1.2E+02 0.0041 27.4 5.8 68 239-308 4-85 (247)
477 3obb_A Probable 3-hydroxyisobu 23.2 2.8E+02 0.0097 25.6 8.6 109 241-363 7-120 (300)
478 2vhw_A Alanine dehydrogenase; 23.1 56 0.0019 31.5 3.7 95 239-338 170-268 (377)
479 2pd4_A Enoyl-[acyl-carrier-pro 22.9 2.8E+02 0.0096 24.6 8.4 69 240-308 9-94 (275)
480 4fb5_A Probable oxidoreductase 22.6 2.3E+02 0.0079 26.3 8.0 66 236-305 25-101 (393)
481 2iz1_A 6-phosphogluconate dehy 22.5 2E+02 0.0068 28.5 7.8 113 241-362 9-125 (474)
482 4dio_A NAD(P) transhydrogenase 22.5 66 0.0023 31.7 4.0 40 239-280 192-233 (405)
483 1l7d_A Nicotinamide nucleotide 22.4 87 0.003 30.2 4.9 40 239-280 174-215 (384)
484 3jyo_A Quinate/shikimate dehyd 22.3 2.4E+02 0.0082 25.9 7.8 111 239-361 129-248 (283)
485 3grk_A Enoyl-(acyl-carrier-pro 22.1 3.7E+02 0.012 24.2 9.1 97 240-338 34-169 (293)
486 1g0o_A Trihydroxynaphthalene r 22.0 3.1E+02 0.01 24.4 8.4 98 240-338 32-163 (283)
487 1qsg_A Enoyl-[acyl-carrier-pro 21.9 2.9E+02 0.0099 24.3 8.2 69 240-308 12-97 (265)
488 3mog_A Probable 3-hydroxybutyr 21.8 4.2E+02 0.014 26.3 10.1 85 241-335 9-117 (483)
489 3ghy_A Ketopantoate reductase 21.5 1.3E+02 0.0044 28.0 5.9 82 241-336 7-102 (335)
490 3o8q_A Shikimate 5-dehydrogena 21.3 3E+02 0.01 25.2 8.2 107 239-360 128-239 (281)
491 3ktd_A Prephenate dehydrogenas 21.3 71 0.0024 30.5 4.0 82 240-332 11-95 (341)
492 1zh8_A Oxidoreductase; TM0312, 21.2 2.9E+02 0.0098 25.7 8.3 70 232-305 14-89 (340)
493 3vtf_A UDP-glucose 6-dehydroge 20.9 43 0.0015 33.5 2.4 100 236-338 20-143 (444)
494 4hkt_A Inositol 2-dehydrogenas 20.9 2.4E+02 0.0081 26.0 7.6 61 241-305 7-70 (331)
495 4gqa_A NAD binding oxidoreduct 20.8 2E+02 0.007 27.4 7.3 67 235-305 25-103 (412)
496 2y0c_A BCEC, UDP-glucose dehyd 20.8 2.7E+02 0.0091 27.7 8.3 94 241-337 12-127 (478)
497 3ezy_A Dehydrogenase; structur 20.7 3E+02 0.01 25.4 8.3 107 241-358 6-115 (344)
498 2p4q_A 6-phosphogluconate dehy 20.7 3.4E+02 0.012 27.1 9.1 114 241-363 14-132 (497)
499 5nul_A Flavodoxin; electron tr 20.7 3E+02 0.01 21.4 7.5 65 298-362 45-111 (138)
500 1x13_A NAD(P) transhydrogenase 20.5 70 0.0024 31.2 3.8 40 239-280 174-215 (401)
No 1
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.71 E-value=1.7e-16 Score=144.10 Aligned_cols=160 Identities=19% Similarity=0.223 Sum_probs=117.7
Q ss_pred HHHHHHh-hCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEE
Q 047630 224 SIDEVLA-TKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIV 302 (392)
Q Consensus 224 lI~~ll~-l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV 302 (392)
.+..++. +.++.+| ||+|||+|.++..+++.+..++++| ++......+.++-.+.+..++...++ .+++||+|
T Consensus 33 ~~~~~~~~~~~~~~v---LDiGcG~G~~~~~l~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~fD~v 106 (211)
T 3e23_A 33 TLTKFLGELPAGAKI---LELGCGAGYQAEAMLAAGFDVDATD--GSPELAAEASRRLGRPVRTMLFHQLD-AIDAYDAV 106 (211)
T ss_dssp HHHHHHTTSCTTCEE---EESSCTTSHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHHTSCCEECCGGGCC-CCSCEEEE
T ss_pred HHHHHHHhcCCCCcE---EEECCCCCHHHHHHHHcCCeEEEEC--CCHHHHHHHHHhcCCceEEeeeccCC-CCCcEEEE
Confidence 3444443 3444455 9999999999999999999999855 53455555554424688899999998 78999999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc-----------chHHHHHHHHHHcC-CeEEEEEEeecc
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA-----------QLEDVYVPLIESVG-FNKLKWVVGRKL 370 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~-----------~l~~~l~~ll~~aG-f~~i~w~~~~k~ 370 (392)
++..+++|+ +.++...+++++.|+|||||++++........ -..+++.++++++| |+.+........
T Consensus 107 ~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~ 185 (211)
T 3e23_A 107 WAHACLLHV-PRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGK 185 (211)
T ss_dssp EECSCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEE
T ss_pred EecCchhhc-CHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCC
Confidence 999999885 45577789999999999999999986533211 12677999999999 999988866543
Q ss_pred CCCCcccceeeEEEEEcCCCC
Q 047630 371 DRGPELREMYLSALLEKPFLD 391 (392)
Q Consensus 371 d~~~~~~e~ylsai~~Kp~~~ 391 (392)
... +....|+.++..||..|
T Consensus 186 ~~~-~~~~~wl~~~~~~~~~~ 205 (211)
T 3e23_A 186 GFD-QELAQFLHVSVRKPELE 205 (211)
T ss_dssp CTT-SCEEEEEEEEEECCCC-
T ss_pred CCC-CCCceEEEEEEecCccc
Confidence 322 33455666777776543
No 2
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.69 E-value=4e-16 Score=140.70 Aligned_cols=140 Identities=13% Similarity=0.071 Sum_probs=109.7
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcC-CccEEEeccCcCCCCCCccc
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRG-VVPLYISISQRLPFFDNTLD 300 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg-~i~~~~~d~~~Lpf~d~sFD 300 (392)
..++..++... +.+| ||+|||+|.++..+++.+..+++ +|++..+.+.+.++. .+.++++|+..+++++++||
T Consensus 31 ~~~l~~~~~~~-~~~v---LDiGcG~G~~~~~l~~~~~~v~g--vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD 104 (203)
T 3h2b_A 31 RVLIEPWATGV-DGVI---LDVGSGTGRWTGHLASLGHQIEG--LEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWA 104 (203)
T ss_dssp HHHHHHHHHHC-CSCE---EEETCTTCHHHHHHHHTTCCEEE--ECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEE
T ss_pred HHHHHHHhccC-CCeE---EEecCCCCHHHHHHHhcCCeEEE--EeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeE
Confidence 34455555433 4566 99999999999999999999988 556455555555542 47899999999999999999
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc------------chHHHHHHHHHHcCCeEEEEEEee
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA------------QLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~------------~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
+|++..+++|+ +.++...+++++.|+|||||++++..+..... -..+++.++++++||+.+......
T Consensus 105 ~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 105 GLLAWYSLIHM-GPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp EEEEESSSTTC-CTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred EEEehhhHhcC-CHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 99999999985 44566789999999999999999987543320 116779999999999999887553
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.69 E-value=5.8e-16 Score=147.30 Aligned_cols=144 Identities=14% Similarity=0.117 Sum_probs=103.5
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc----CCEEEEEecCCCchhHHHHHhc----C---CccEEEeccCcCCCCCCcc
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER----NITIVTTSMNLNGPFNNFIASR----G---VVPLYISISQRLPFFDNTL 299 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~----g~~vvg~~iD~~a~~~~~aa~r----g---~i~~~~~d~~~Lpf~d~sF 299 (392)
+.++.+| ||||||+|.++..+++. +.+++| +|++..+.+.+.++ + .+.++++|+..+|+. .|
T Consensus 68 ~~~~~~v---LDlGcGtG~~~~~la~~~~~~~~~v~g--vD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~ 140 (261)
T 4gek_A 68 VQPGTQV---YDLGCSLGAATLSVRRNIHHDNCKIIA--IDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NA 140 (261)
T ss_dssp CCTTCEE---EEETCTTTHHHHHHHHTCCSSSCEEEE--EESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SE
T ss_pred CCCCCEE---EEEeCCCCHHHHHHHHhcCCCCCEEEE--EECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--cc
Confidence 3456666 99999999999999874 568888 55545555544332 2 378899999998874 59
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccc----------------------------------
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQ---------------------------------- 345 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~---------------------------------- 345 (392)
|+|++.++++++ ++.+...+|++++|+|||||+|++.+.......
T Consensus 141 d~v~~~~~l~~~-~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~ 219 (261)
T 4gek_A 141 SMVVLNFTLQFL-EPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENV 219 (261)
T ss_dssp EEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHH
T ss_pred ccceeeeeeeec-CchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhccc
Confidence 999999999874 556667899999999999999999875322110
Q ss_pred ----hHHHHHHHHHHcCCeEEEEEEeeccCCCCcccceeeEEEEEcCCCC
Q 047630 346 ----LEDVYVPLIESVGFNKLKWVVGRKLDRGPELREMYLSALLEKPFLD 391 (392)
Q Consensus 346 ----l~~~l~~ll~~aGf~~i~w~~~~k~d~~~~~~e~ylsai~~Kp~~~ 391 (392)
..+++.++++++||+.++.-.. .-.|-+.+..||-..
T Consensus 220 ~~~~s~~~~~~~L~~AGF~~ve~~fq---------~~nF~~~iA~K~~~~ 260 (261)
T 4gek_A 220 MLTDSVETHKARLHKAGFEHSELWFQ---------CFNFGSLVALKAEDA 260 (261)
T ss_dssp CCCBCHHHHHHHHHHHTCSEEEEEEE---------ETTEEEEEEECCTTC
T ss_pred ccCCCHHHHHHHHHHcCCCeEEEEEE---------eccEEEEEEEEcCCC
Confidence 0345778999999998753211 112345678888653
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.68 E-value=4.9e-16 Score=141.54 Aligned_cols=151 Identities=15% Similarity=0.131 Sum_probs=109.8
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcC---CEEEEEecCCCchhHHHHHh----cC--CccEEEeccCc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERN---ITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQR 291 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g---~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~ 291 (392)
.+.+++.+ .+.++.+| ||+|||+|.++..+++.+ ..++++| ++....+.+.+ .+ .+.++.+|...
T Consensus 26 ~~~~~~~~-~~~~~~~v---LDiG~G~G~~~~~l~~~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 99 (219)
T 3dh0_A 26 PEKVLKEF-GLKEGMTV---LDVGTGAGFYLPYLSKMVGEKGKVYAID--VQEEMVNYAWEKVNKLGLKNVEVLKSEENK 99 (219)
T ss_dssp HHHHHHHH-TCCTTCEE---EESSCTTCTTHHHHHHHHTTTCEEEEEE--SCHHHHHHHHHHHHHHTCTTEEEEECBTTB
T ss_pred HHHHHHHh-CCCCCCEE---EEEecCCCHHHHHHHHHhCCCcEEEEEE--CCHHHHHHHHHHHHHcCCCcEEEEeccccc
Confidence 34444433 34555555 999999999999999865 6888855 43444443322 22 37889999999
Q ss_pred CCCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccc---------hHHHHHHHHHHcCCeEE
Q 047630 292 LPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQ---------LEDVYVPLIESVGFNKL 362 (392)
Q Consensus 292 Lpf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~---------l~~~l~~ll~~aGf~~i 362 (392)
+++++++||+|++..+++++ .+...+++++.|+|||||++++.++...... ..+++.++++++||+.+
T Consensus 100 ~~~~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 176 (219)
T 3dh0_A 100 IPLPDNTVDFIFMAFTFHEL---SEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVG 176 (219)
T ss_dssp CSSCSSCEEEEEEESCGGGC---SSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEE
T ss_pred CCCCCCCeeEEEeehhhhhc---CCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEE
Confidence 99999999999999999997 3445799999999999999999876543211 15679999999999999
Q ss_pred EEEEeeccCCCCcccceeeEEEEEcCC
Q 047630 363 KWVVGRKLDRGPELREMYLSALLEKPF 389 (392)
Q Consensus 363 ~w~~~~k~d~~~~~~e~ylsai~~Kp~ 389 (392)
+..... ... ...+++|+.
T Consensus 177 ~~~~~~--------~~~-~~~~~~k~~ 194 (219)
T 3dh0_A 177 RVVEVG--------KYC-FGVYAMIVK 194 (219)
T ss_dssp EEEEET--------TTE-EEEEEECC-
T ss_pred EEEeeC--------Cce-EEEEEEecc
Confidence 876331 122 346778764
No 5
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.68 E-value=4.7e-16 Score=145.90 Aligned_cols=138 Identities=19% Similarity=0.207 Sum_probs=103.5
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cC--CccEEEeccCcCCC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRLPF 294 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~Lpf 294 (392)
.+.+++.+ ...++.+| ||||||+|.++..+++.+..++++| ++..+.+.+.+ .+ .+.+.++|.+.+|+
T Consensus 26 ~~~l~~~l-~~~~~~~v---LDiGcG~G~~~~~l~~~~~~v~gvD--~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~ 99 (260)
T 1vl5_A 26 LAKLMQIA-ALKGNEEV---LDVATGGGHVANAFAPFVKKVVAFD--LTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF 99 (260)
T ss_dssp HHHHHHHH-TCCSCCEE---EEETCTTCHHHHHHGGGSSEEEEEE--SCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS
T ss_pred HHHHHHHh-CCCCCCEE---EEEeCCCCHHHHHHHHhCCEEEEEe--CCHHHHHHHHHHHHhcCCCceEEEEecHHhCCC
Confidence 45555443 34444555 9999999999999999888888855 54455443332 23 37889999999999
Q ss_pred CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc---------------------chHHHHHHH
Q 047630 295 FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA---------------------QLEDVYVPL 353 (392)
Q Consensus 295 ~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~---------------------~l~~~l~~l 353 (392)
++++||+|++..+++|+. +...+|+++.|+|||||+|++.+...... ...+.+.++
T Consensus 100 ~~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (260)
T 1vl5_A 100 TDERFHIVTCRIAAHHFP---NPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKM 176 (260)
T ss_dssp CTTCEEEEEEESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHH
T ss_pred CCCCEEEEEEhhhhHhcC---CHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHH
Confidence 999999999999999984 34579999999999999999876533211 114568899
Q ss_pred HHHcCCeEEEEEEe
Q 047630 354 IESVGFNKLKWVVG 367 (392)
Q Consensus 354 l~~aGf~~i~w~~~ 367 (392)
++++||+.+.+...
T Consensus 177 l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 177 LEEAGFELEELHCF 190 (260)
T ss_dssp HHHHTCEEEEEEEE
T ss_pred HHHCCCeEEEEEEe
Confidence 99999998877754
No 6
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.67 E-value=3.1e-15 Score=136.30 Aligned_cols=153 Identities=11% Similarity=0.138 Sum_probs=110.8
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcC--CccEEEeccCcCCCCCCc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRG--VVPLYISISQRLPFFDNT 298 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg--~i~~~~~d~~~Lpf~d~s 298 (392)
...+++.+. ..++.+| ||+|||+|.++..+++.+..+++ +|++....+.+.++. .+.++.+|+..++++ ++
T Consensus 34 ~~~~l~~~~-~~~~~~v---LDiGcG~G~~~~~l~~~~~~v~~--vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~ 106 (220)
T 3hnr_A 34 YEDILEDVV-NKSFGNV---LEFGVGTGNLTNKLLLAGRTVYG--IEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TS 106 (220)
T ss_dssp HHHHHHHHH-HTCCSEE---EEECCTTSHHHHHHHHTTCEEEE--ECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SC
T ss_pred HHHHHHHhh-ccCCCeE---EEeCCCCCHHHHHHHhCCCeEEE--EeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CC
Confidence 455555544 3455555 99999999999999999999988 555445555444442 478999999999988 99
Q ss_pred ccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccc---------------------------hHHHHH
Q 047630 299 LDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQ---------------------------LEDVYV 351 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~---------------------------l~~~l~ 351 (392)
||+|++..+++++ ++.....+++++.|+|||||.+++.+....... ..+++.
T Consensus 107 fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (220)
T 3hnr_A 107 IDTIVSTYAFHHL-TDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQ 185 (220)
T ss_dssp CSEEEEESCGGGS-CHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHH
T ss_pred eEEEEECcchhcC-ChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHH
Confidence 9999999999986 334434599999999999999999874321110 136789
Q ss_pred HHHHHcCCeEEEEEEeeccCCCCcccceeeEEEEEcCCCC
Q 047630 352 PLIESVGFNKLKWVVGRKLDRGPELREMYLSALLEKPFLD 391 (392)
Q Consensus 352 ~ll~~aGf~~i~w~~~~k~d~~~~~~e~ylsai~~Kp~~~ 391 (392)
++++++||+++..... ...|+ +..+|+...
T Consensus 186 ~~l~~aGf~v~~~~~~---------~~~w~-~~~~~~~~~ 215 (220)
T 3hnr_A 186 TIFENNGFHVTFTRLN---------HFVWV-MEATKQLEH 215 (220)
T ss_dssp HHHHHTTEEEEEEECS---------SSEEE-EEEEECSCC
T ss_pred HHHHHCCCEEEEeecc---------ceEEE-Eeehhhhhh
Confidence 9999999987765411 23333 567776543
No 7
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.66 E-value=9.3e-16 Score=138.69 Aligned_cols=122 Identities=16% Similarity=0.354 Sum_probs=95.3
Q ss_pred EEEEEcCCcchHHHHHHHc-CCEEEEEecCCCchhHHHHHhc----C---CccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMMER-NITIVTTSMNLNGPFNNFIASR----G---VVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-g~~vvg~~iD~~a~~~~~aa~r----g---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
.|||+|||+|.++..+++. +..++++ |++....+.+.++ + .+.++++|...+++++++||+|++..+++|
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~~--D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDFSIRAL--DFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEEEEEEE--ESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred EEEEECCCCCHHHHHHHHcCCCeEEEE--ECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 5599999999999999996 6677774 4544444433332 2 378899999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEeeccccc--------------------------chHHHHHHHHHHcCCeEEEE
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA--------------------------QLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~--------------------------~l~~~l~~ll~~aGf~~i~w 364 (392)
+ .+...+++++.|+|||||++++.+...... ...+++.++++++||+.++.
T Consensus 124 ~---~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 200 (219)
T 3dlc_A 124 W---EDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEI 200 (219)
T ss_dssp C---SCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEE
T ss_pred c---cCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEE
Confidence 7 445579999999999999999986432110 01467899999999999877
Q ss_pred E
Q 047630 365 V 365 (392)
Q Consensus 365 ~ 365 (392)
.
T Consensus 201 ~ 201 (219)
T 3dlc_A 201 I 201 (219)
T ss_dssp E
T ss_pred E
Confidence 6
No 8
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.66 E-value=9.2e-16 Score=141.31 Aligned_cols=137 Identities=17% Similarity=0.095 Sum_probs=104.0
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcC--CccEEEeccCcCCCCCCc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRG--VVPLYISISQRLPFFDNT 298 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg--~i~~~~~d~~~Lpf~d~s 298 (392)
.+.+++.+....++.+| ||||||+|.++..+++.+.+++|+| ++....+.+.++. .+.++++|++.+ +++++
T Consensus 30 ~~~~~~~l~~~~~~~~v---LDiGcG~G~~~~~l~~~~~~v~gvD--~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~ 103 (250)
T 2p7i_A 30 HPFMVRAFTPFFRPGNL---LELGSFKGDFTSRLQEHFNDITCVE--ASEEAISHAQGRLKDGITYIHSRFEDA-QLPRR 103 (250)
T ss_dssp HHHHHHHHGGGCCSSCE---EEESCTTSHHHHHHTTTCSCEEEEE--SCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSC
T ss_pred HHHHHHHHHhhcCCCcE---EEECCCCCHHHHHHHHhCCcEEEEe--CCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCc
Confidence 34455555545555666 9999999999999999998998854 5445555444442 478899998887 47889
Q ss_pred ccEEEEcccccccCCchhHHHHHHHHH-HcccCCcEEEEEeecccc-----------------------------cchHH
Q 047630 299 LDIVHSMHVLSNWIPTTLLHFLMFDIY-RVLRPGGLFWLDHFFCVG-----------------------------AQLED 348 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~~~l~~~L~el~-RvLKPGG~lii~~~~~~~-----------------------------~~l~~ 348 (392)
||+|++..+++|+.+ ...+++++. |+|||||++++....... .-..+
T Consensus 104 fD~v~~~~~l~~~~~---~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (250)
T 2p7i_A 104 YDNIVLTHVLEHIDD---PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALD 180 (250)
T ss_dssp EEEEEEESCGGGCSS---HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHH
T ss_pred ccEEEEhhHHHhhcC---HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHH
Confidence 999999999999743 357999999 999999999998743210 00156
Q ss_pred HHHHHHHHcCCeEEEEEE
Q 047630 349 VYVPLIESVGFNKLKWVV 366 (392)
Q Consensus 349 ~l~~ll~~aGf~~i~w~~ 366 (392)
++.++++++||+.+++..
T Consensus 181 ~~~~~l~~~Gf~~~~~~~ 198 (250)
T 2p7i_A 181 TLERDASRAGLQVTYRSG 198 (250)
T ss_dssp HHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEee
Confidence 799999999999998764
No 9
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.66 E-value=2e-15 Score=140.91 Aligned_cols=143 Identities=14% Similarity=0.164 Sum_probs=108.1
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc-CCEEEEEecCCCchhHHHHHhc----CCccEEEeccCcCCCCC
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER-NITIVTTSMNLNGPFNNFIASR----GVVPLYISISQRLPFFD 296 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~-g~~vvg~~iD~~a~~~~~aa~r----g~i~~~~~d~~~Lpf~d 296 (392)
...++.++.......-.+|||||||+|.++..+++. +..++++| ++....+.+.++ ..+.++++|...+|+++
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~ 118 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGID--ICSNIVNMANERVSGNNKIIFEANDILTKEFPE 118 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEE--SCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCT
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEe--CCHHHHHHHHHHhhcCCCeEEEECccccCCCCC
Confidence 344555554332122234499999999999999996 88998855 544555555544 24788999999999999
Q ss_pred CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccc-c-----------------chHHHHHHHHHHcC
Q 047630 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG-A-----------------QLEDVYVPLIESVG 358 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~-~-----------------~l~~~l~~ll~~aG 358 (392)
++||+|++..+++|+ ++.+...+++++.|+|||||++++.++.... . ...+.+.++++++|
T Consensus 119 ~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 197 (266)
T 3ujc_A 119 NNFDLIYSRDAILAL-SLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACN 197 (266)
T ss_dssp TCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTT
T ss_pred CcEEEEeHHHHHHhc-ChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcC
Confidence 999999999999985 5566778999999999999999998764332 0 01567999999999
Q ss_pred CeEEEEEEe
Q 047630 359 FNKLKWVVG 367 (392)
Q Consensus 359 f~~i~w~~~ 367 (392)
|+.+.....
T Consensus 198 f~~~~~~~~ 206 (266)
T 3ujc_A 198 FKNVVSKDL 206 (266)
T ss_dssp CEEEEEEEC
T ss_pred CeEEEEEeC
Confidence 999987743
No 10
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.65 E-value=2.4e-16 Score=143.68 Aligned_cols=131 Identities=6% Similarity=-0.053 Sum_probs=97.5
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc------------------CCccEEEeccCcCC
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR------------------GVVPLYISISQRLP 293 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r------------------g~i~~~~~d~~~Lp 293 (392)
.++.+| ||+|||+|..+..|+++|..|+|+|++ ..+.+.+.++ ..+.++++|+..++
T Consensus 21 ~~~~~v---LD~GCG~G~~~~~la~~g~~V~gvD~S--~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~ 95 (203)
T 1pjz_A 21 VPGARV---LVPLCGKSQDMSWLSGQGYHVVGAELS--EAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT 95 (203)
T ss_dssp CTTCEE---EETTTCCSHHHHHHHHHCCEEEEEEEC--HHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred CCCCEE---EEeCCCCcHhHHHHHHCCCeEEEEeCC--HHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC
Confidence 445555 999999999999999999999995544 4554444332 24789999999999
Q ss_pred CCC-CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee-cccc---c----chHHHHHHHHHHcCCeEEEE
Q 047630 294 FFD-NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF-FCVG---A----QLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 294 f~d-~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~-~~~~---~----~l~~~l~~ll~~aGf~~i~w 364 (392)
+.+ ++||+|++..+++++ +.+....++++++|+|||||++++... +... . -..+++.+++++ ||+.+..
T Consensus 96 ~~~~~~fD~v~~~~~l~~l-~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~ 173 (203)
T 1pjz_A 96 ARDIGHCAAFYDRAAMIAL-PADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKV 173 (203)
T ss_dssp HHHHHSEEEEEEESCGGGS-CHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEE
T ss_pred cccCCCEEEEEECcchhhC-CHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEe
Confidence 876 899999999999875 556667899999999999998443332 2110 0 125678888888 9998887
Q ss_pred EEeec
Q 047630 365 VVGRK 369 (392)
Q Consensus 365 ~~~~k 369 (392)
.....
T Consensus 174 ~~~~~ 178 (203)
T 1pjz_A 174 GGQDT 178 (203)
T ss_dssp EESSC
T ss_pred ccccc
Confidence 75543
No 11
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.65 E-value=1.7e-15 Score=139.58 Aligned_cols=146 Identities=16% Similarity=0.125 Sum_probs=106.3
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----C-CccEEEeccCcCCCCCCcccEEEEcc-cccccC
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----G-VVPLYISISQRLPFFDNTLDIVHSMH-VLSNWI 312 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g-~i~~~~~d~~~Lpf~d~sFDlV~s~~-~l~~~~ 312 (392)
.|||+|||+|.++..+++.+..+++ +|++..+.+.+.++ + .+.++++|...++++ ++||+|++.. +++|+.
T Consensus 40 ~vLdiG~G~G~~~~~l~~~~~~~~~--~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~ 116 (246)
T 1y8c_A 40 DYLDLACGTGNLTENLCPKFKNTWA--VDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNYII 116 (246)
T ss_dssp EEEEETCTTSTTHHHHGGGSSEEEE--ECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCC
T ss_pred eEEEeCCCCCHHHHHHHHCCCcEEE--EECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccccccC
Confidence 3499999999999999999999988 55544444433322 2 478899999998876 8899999998 999976
Q ss_pred CchhHHHHHHHHHHcccCCcEEEEEeeccc-----------------------------------------c--------
Q 047630 313 PTTLLHFLMFDIYRVLRPGGLFWLDHFFCV-----------------------------------------G-------- 343 (392)
Q Consensus 313 ~~~~l~~~L~el~RvLKPGG~lii~~~~~~-----------------------------------------~-------- 343 (392)
++.+...+++++.++|||||+++++..... .
T Consensus 117 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (246)
T 1y8c_A 117 DSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKRFDE 196 (246)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCcccccEE
Confidence 667788999999999999999988532100 0
Q ss_pred -----cchHHHHHHHHHHcCCeEEEEEEeeccCCCCcccceeeEEEEEcC
Q 047630 344 -----AQLEDVYVPLIESVGFNKLKWVVGRKLDRGPELREMYLSALLEKP 388 (392)
Q Consensus 344 -----~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~~~~~e~ylsai~~Kp 388 (392)
.-..+++.++++++||+.++................ +..+.+||
T Consensus 197 ~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~-~~~varK~ 245 (246)
T 1y8c_A 197 EHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTER-ITYLVKLG 245 (246)
T ss_dssp EEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSE-EEEEEEEC
T ss_pred EEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCcee-EEEEEEec
Confidence 002677999999999999988644221111112222 24688887
No 12
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.65 E-value=2e-15 Score=140.37 Aligned_cols=135 Identities=16% Similarity=0.209 Sum_probs=103.3
Q ss_pred HHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cC--CccEEEeccCcCCCCCCc
Q 047630 225 IDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRLPFFDNT 298 (392)
Q Consensus 225 I~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~Lpf~d~s 298 (392)
+-+.+.+.++.+| ||||||+|.++..+++.+..++++| ++..+.+.+.+ .+ .+.+.++|.+.+|+++++
T Consensus 13 ~~~~~~~~~~~~v---LDiGcG~G~~~~~l~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 87 (239)
T 1xxl_A 13 MIKTAECRAEHRV---LDIGAGAGHTALAFSPYVQECIGVD--ATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDS 87 (239)
T ss_dssp HHHHHTCCTTCEE---EEESCTTSHHHHHHGGGSSEEEEEE--SCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTC
T ss_pred HHHHhCcCCCCEE---EEEccCcCHHHHHHHHhCCEEEEEE--CCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCc
Confidence 3444556666666 9999999999999999988998855 43444443322 22 378899999999999999
Q ss_pred ccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc---------------------chHHHHHHHHHHc
Q 047630 299 LDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA---------------------QLEDVYVPLIESV 357 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~---------------------~l~~~l~~ll~~a 357 (392)
||+|++..+++|+. +...+++++.|+|||||++++.+...... ...+++.++++++
T Consensus 88 fD~v~~~~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 164 (239)
T 1xxl_A 88 FDIITCRYAAHHFS---DVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSAN 164 (239)
T ss_dssp EEEEEEESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHT
T ss_pred EEEEEECCchhhcc---CHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHC
Confidence 99999999999984 44579999999999999999876543211 1156689999999
Q ss_pred CCeEEEEEEe
Q 047630 358 GFNKLKWVVG 367 (392)
Q Consensus 358 Gf~~i~w~~~ 367 (392)
||+.+.....
T Consensus 165 Gf~~~~~~~~ 174 (239)
T 1xxl_A 165 QLAYQDIQKW 174 (239)
T ss_dssp TEEEEEEEEE
T ss_pred CCcEEEEEee
Confidence 9998876643
No 13
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.65 E-value=1.4e-15 Score=142.90 Aligned_cols=97 Identities=12% Similarity=0.103 Sum_probs=80.8
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcC-CccEEEeccCcCCCCCCcccEEEEcc-cccccCCchh
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRG-VVPLYISISQRLPFFDNTLDIVHSMH-VLSNWIPTTL 316 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg-~i~~~~~d~~~Lpf~d~sFDlV~s~~-~l~~~~~~~~ 316 (392)
.|||||||+|.++..+++.+..++++| ++..+.+.+.++. .+.++++|+..+++ +++||+|++.. +++|+.++++
T Consensus 53 ~vLDiGcG~G~~~~~l~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~ 129 (263)
T 3pfg_A 53 SLLDVACGTGMHLRHLADSFGTVEGLE--LSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAE 129 (263)
T ss_dssp EEEEETCTTSHHHHHHTTTSSEEEEEE--SCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHH
T ss_pred cEEEeCCcCCHHHHHHHHcCCeEEEEE--CCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHH
Confidence 349999999999999999999998855 5445555554442 47899999999988 78999999998 9998766677
Q ss_pred HHHHHHHHHHcccCCcEEEEEe
Q 047630 317 LHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 317 l~~~L~el~RvLKPGG~lii~~ 338 (392)
...+++++.++|||||+|++..
T Consensus 130 ~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 130 LDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCcEEEEEe
Confidence 7889999999999999999863
No 14
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.65 E-value=2.8e-15 Score=137.21 Aligned_cols=145 Identities=18% Similarity=0.289 Sum_probs=109.2
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----CC-------ccEEEeccCcCCCCCCccc
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----GV-------VPLYISISQRLPFFDNTLD 300 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g~-------i~~~~~d~~~Lpf~d~sFD 300 (392)
.++.+| ||+|||+|.++..+++.+..++++| ++....+.+.++ +. +.+..++...+++++++||
T Consensus 29 ~~~~~v---LdiG~G~G~~~~~l~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 103 (235)
T 3sm3_A 29 QEDDEI---LDIGCGSGKISLELASKGYSVTGID--INSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFD 103 (235)
T ss_dssp CTTCEE---EEETCTTSHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEE
T ss_pred CCCCeE---EEECCCCCHHHHHHHhCCCeEEEEE--CCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCcee
Confidence 344555 9999999999999999999999955 434444444332 22 5788999999999999999
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccc-------------------------------------
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG------------------------------------- 343 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~------------------------------------- 343 (392)
+|++..+++++.+......+++++.|+|||||++++.++....
T Consensus 104 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (235)
T 3sm3_A 104 FAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAH 183 (235)
T ss_dssp EEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEE
T ss_pred EEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeE
Confidence 9999999999877776778999999999999999998653210
Q ss_pred cchHHHHHHHHHHcCCeEEEEEEeec-cCCCCcccceee
Q 047630 344 AQLEDVYVPLIESVGFNKLKWVVGRK-LDRGPELREMYL 381 (392)
Q Consensus 344 ~~l~~~l~~ll~~aGf~~i~w~~~~k-~d~~~~~~e~yl 381 (392)
.-..+++.++++++||+++.+....- ...+......|+
T Consensus 184 ~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~g~~~~~~~i 222 (235)
T 3sm3_A 184 HFTEKELVFLLTDCRFEIDYFRVKELETRTGNKILGFVI 222 (235)
T ss_dssp CBCHHHHHHHHHTTTEEEEEEEEEEEECTTSCEEEEEEE
T ss_pred eCCHHHHHHHHHHcCCEEEEEEecceeeccCCccceEEE
Confidence 01266799999999999999876553 222334444444
No 15
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.64 E-value=1.5e-16 Score=150.07 Aligned_cols=173 Identities=21% Similarity=0.292 Sum_probs=118.2
Q ss_pred ccccccCCCCChHH-HHHHHHHcCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccccccCcchhhhccccC
Q 047630 114 MSYKVNASCPDDEL-LAQKLLLKGCEPLPRRRCRAVGPSHYIEPYPLPKSLWTTPPDSSLVWTAYTCKNYTCLINRKHTQ 192 (392)
Q Consensus 114 m~y~~~~~Cp~~~~-l~~~~~~~~C~~~~~r~c~~~~p~~y~~p~p~p~s~~~~p~d~~~~W~~y~~~~~~~L~~~~~~~ 192 (392)
|++. ||.|.. +........|+ ++|+++.+..||.+.++.+.+..+.|++....+.
T Consensus 1 m~~~----Cp~C~~~~~~~~~~~~C~---~~~~~~~~~~Gy~~~~~~~~~~~~~~~~~~~~~~----------------- 56 (269)
T 1p91_A 1 MSFS----CPLCHQPLSREKNSYICP---QRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEMMQ----------------- 56 (269)
T ss_dssp -CBB----CTTTCCBCEEETTEEECT---TCCEEEBCTTSCEECSCSSSSCSCCCSSSHHHHH-----------------
T ss_pred Cccc----CCCCCccceeCCCEEECC---CCCcCCcCCCEEEEeecccccCCCCCCCCHHHHH-----------------
Confidence 5555 999966 43333456897 7899999999999999888776666665543221
Q ss_pred CCCCCCCcccccccccccceeccCCCCc-HHHHHHHHHhh--CCCCcccEEEEEcCCcchHHHHHHHc--CCEEEEEecC
Q 047630 193 KGFDDCKDCFDLQGVEKIRWTQKKGNGG-LDFSIDEVLAT--KKPGTIRIGLDIGGGVATFAVRMMER--NITIVTTSMN 267 (392)
Q Consensus 193 ~~~~~c~~cFd~~~~e~~~w~~~~~~~~-~~~lI~~ll~l--~~~~~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD 267 (392)
++..|...+.... .+.+.+.+... .++.+| ||||||+|.++..+++. +..+++ +|
T Consensus 57 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---LdiG~G~G~~~~~l~~~~~~~~v~~--vD 116 (269)
T 1p91_A 57 ---------------ARRAFLDAGHYQPLRDAIVAQLRERLDDKATAV---LDIGCGEGYYTHAFADALPEITTFG--LD 116 (269)
T ss_dssp ---------------HHHHHHTTTTTHHHHHHHHHHHHHHSCTTCCEE---EEETCTTSTTHHHHHHTCTTSEEEE--EE
T ss_pred ---------------HHHHHHhCCCcHHHHHHHHHHHHHhcCCCCCEE---EEECCCCCHHHHHHHHhCCCCeEEE--Ee
Confidence 1122222221101 12222223322 233444 99999999999999986 778888 45
Q ss_pred CCchhHHHHHhcC-CccEEEeccCcCCCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec
Q 047630 268 LNGPFNNFIASRG-VVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 268 ~~a~~~~~aa~rg-~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~ 340 (392)
++..+.+.+.++. .+.+..+|...+++++++||+|++..+.. +++++.|+|||||.+++....
T Consensus 117 ~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~----------~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 117 VSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPC----------KAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp SCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCC----------CHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCChh----------hHHHHHHhcCCCcEEEEEEcC
Confidence 5455555555553 46889999999999999999999876532 479999999999999888754
No 16
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.64 E-value=3.9e-15 Score=134.43 Aligned_cols=164 Identities=16% Similarity=0.125 Sum_probs=118.1
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchH-HHHHHHcCCEEEEEecCCCchhHHHHHh----c-CCccEEEeccCcCCC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATF-AVRMMERNITIVTTSMNLNGPFNNFIAS----R-GVVPLYISISQRLPF 294 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~-a~~La~~g~~vvg~~iD~~a~~~~~aa~----r-g~i~~~~~d~~~Lpf 294 (392)
+..+++.+....++.+| ||+|||+|.+ ...+++.+..++++| ++..+.+.+.+ . ..+.+.++|+..+++
T Consensus 11 ~~~~~~~~~~~~~~~~v---LDiGcG~G~~~~~~~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 85 (209)
T 2p8j_A 11 LYRFLKYCNESNLDKTV---LDCGAGGDLPPLSIFVEDGYKTYGIE--ISDLQLKKAENFSRENNFKLNISKGDIRKLPF 85 (209)
T ss_dssp HHHHHHHHHHSSSCSEE---EEESCCSSSCTHHHHHHTTCEEEEEE--CCHHHHHHHHHHHHHHTCCCCEEECCTTSCCS
T ss_pred HHHHHHHHhccCCCCEE---EEECCCCCHHHHHHHHhCCCEEEEEE--CCHHHHHHHHHHHHhcCCceEEEECchhhCCC
Confidence 45555555545555555 9999999997 556677888999855 43444443322 2 247899999999999
Q ss_pred CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc------------------------c--hHH
Q 047630 295 FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA------------------------Q--LED 348 (392)
Q Consensus 295 ~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~------------------------~--l~~ 348 (392)
++++||+|++..+++|+ +..+...+++++.|+|||||++++..+..... . ..+
T Consensus 86 ~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (209)
T 2p8j_A 86 KDESMSFVYSYGTIFHM-RKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLE 164 (209)
T ss_dssp CTTCEEEEEECSCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHH
T ss_pred CCCceeEEEEcChHHhC-CHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHH
Confidence 89999999999999885 56677889999999999999999887532110 0 156
Q ss_pred HHHHHHHHcCCeEEEEEEeeccCCCCcccceeeEEEEEcCCC
Q 047630 349 VYVPLIESVGFNKLKWVVGRKLDRGPELREMYLSALLEKPFL 390 (392)
Q Consensus 349 ~l~~ll~~aGf~~i~w~~~~k~d~~~~~~e~ylsai~~Kp~~ 390 (392)
++.++++++||...+.......+.+......|...+.+|..+
T Consensus 165 e~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~f~~~~~~~~~~ 206 (209)
T 2p8j_A 165 EADKYFKDMKVLFKEDRVVERINDGLKIKQGYVDYIAEKFSK 206 (209)
T ss_dssp HHHHTTTTSEEEEEEEEEEEEEETTEEEEEEEEEEEEECCCC
T ss_pred HHHHHHhhcCceeeeeeeeehhhcCCcccceeeeeehhhhhh
Confidence 688999999988776655554444444457777788887543
No 17
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.64 E-value=5.3e-15 Score=134.01 Aligned_cols=139 Identities=12% Similarity=0.090 Sum_probs=105.4
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcC--CccEEEeccCcCCCCCCc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRG--VVPLYISISQRLPFFDNT 298 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg--~i~~~~~d~~~Lpf~d~s 298 (392)
...+++.+..+.++.+| ||||||+|.++..+++.+..++++| ++....+.+.+.+ .+.++.+|...+ +++++
T Consensus 34 ~~~~~~~l~~~~~~~~v---LdiG~G~G~~~~~l~~~~~~v~~~D--~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~ 107 (218)
T 3ou2_A 34 APAALERLRAGNIRGDV---LELASGTGYWTRHLSGLADRVTALD--GSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQ 107 (218)
T ss_dssp HHHHHHHHTTTTSCSEE---EEESCTTSHHHHHHHHHSSEEEEEE--SCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSC
T ss_pred HHHHHHHHhcCCCCCeE---EEECCCCCHHHHHHHhcCCeEEEEe--CCHHHHHHHHhcCCCCeEEEecccccC-CCCCc
Confidence 44455544445554555 9999999999999999999999854 5445555555544 378889999888 78899
Q ss_pred ccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccc------------------------------cchHH
Q 047630 299 LDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG------------------------------AQLED 348 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~------------------------------~~l~~ 348 (392)
||+|++..+++|+ ++..+..+++++.|+|||||.+++.++.... -...+
T Consensus 108 ~D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (218)
T 3ou2_A 108 WDAVFFAHWLAHV-PDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPA 186 (218)
T ss_dssp EEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHH
T ss_pred eeEEEEechhhcC-CHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHH
Confidence 9999999999985 4454578999999999999999888652210 01256
Q ss_pred HHHHHHHHcCCeEEEEEE
Q 047630 349 VYVPLIESVGFNKLKWVV 366 (392)
Q Consensus 349 ~l~~ll~~aGf~~i~w~~ 366 (392)
++.++++++||++..|..
T Consensus 187 ~~~~~l~~aGf~v~~~~~ 204 (218)
T 3ou2_A 187 ELTERLTALGWSCSVDEV 204 (218)
T ss_dssp HHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHCCCEEEeeec
Confidence 799999999999877764
No 18
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.64 E-value=1.3e-15 Score=141.41 Aligned_cols=128 Identities=18% Similarity=0.175 Sum_probs=101.3
Q ss_pred CCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC--CCCCCcccEEEEcccccc
Q 047630 233 KPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL--PFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 233 ~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L--pf~d~sFDlV~s~~~l~~ 310 (392)
++.+| ||||||+|.++..+++.+..++| +|++....+.+.++ +.++.+|...+ ++++++||+|++..+++|
T Consensus 41 ~~~~v---LDiGcG~G~~~~~l~~~~~~v~g--vD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~ 113 (240)
T 3dli_A 41 GCRRV---LDIGCGRGEFLELCKEEGIESIG--VDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEH 113 (240)
T ss_dssp TCSCE---EEETCTTTHHHHHHHHHTCCEEE--ECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGG
T ss_pred CCCeE---EEEeCCCCHHHHHHHhCCCcEEE--EECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhh
Confidence 34455 99999999999999999999988 55644555555544 78888888775 888999999999999999
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEeeccccc---------------chHHHHHHHHHHcCCeEEEEEEee
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA---------------QLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~---------------~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
+ ++.++..+++++.|+|||||++++........ -..+.+.++++++||+.+......
T Consensus 114 ~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 114 L-DPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp S-CGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred C-CcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEEec
Confidence 6 45566789999999999999999987532210 115679999999999998877554
No 19
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.63 E-value=4.2e-15 Score=137.18 Aligned_cols=128 Identities=15% Similarity=0.142 Sum_probs=101.1
Q ss_pred CCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc---CCccEEEeccCcCCCCCCcccEEEEccccc
Q 047630 233 KPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR---GVVPLYISISQRLPFFDNTLDIVHSMHVLS 309 (392)
Q Consensus 233 ~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r---g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~ 309 (392)
++.+| ||||||+|.++..+++.+..++++| ++....+.+.++ ..+.++++|...+++++++||+|++..+++
T Consensus 53 ~~~~v---LDiG~G~G~~~~~l~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 127 (242)
T 3l8d_A 53 KEAEV---LDVGCGDGYGTYKLSRTGYKAVGVD--ISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLE 127 (242)
T ss_dssp TTCEE---EEETCTTSHHHHHHHHTTCEEEEEE--SCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTT
T ss_pred CCCeE---EEEcCCCCHHHHHHHHcCCeEEEEE--CCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHh
Confidence 44455 9999999999999999999999855 544555555544 247889999999999999999999999999
Q ss_pred ccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc------------------chHHHHHHHHHHcCCeEEEEEEee
Q 047630 310 NWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA------------------QLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 310 ~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~------------------~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
|+ .+...+++++.++|||||++++..+..... -..+++.++++++||+.+......
T Consensus 128 ~~---~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 201 (242)
T 3l8d_A 128 WT---EEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVY 201 (242)
T ss_dssp SS---SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hc---cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeeccc
Confidence 97 344579999999999999999987532211 115679999999999999876443
No 20
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.63 E-value=9.2e-15 Score=129.50 Aligned_cols=157 Identities=15% Similarity=0.119 Sum_probs=112.2
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcC-CccEEEeccCcCCCCCCccc
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRG-VVPLYISISQRLPFFDNTLD 300 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg-~i~~~~~d~~~Lpf~d~sFD 300 (392)
..++..+ +.++.+| ||+|||+|.++..+++.+..++++| ++....+.+.++. .+.++.+|...+++++++||
T Consensus 37 ~~~l~~~--~~~~~~v---LdiG~G~G~~~~~l~~~~~~v~~~D--~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D 109 (195)
T 3cgg_A 37 ARLIDAM--APRGAKI---LDAGCGQGRIGGYLSKQGHDVLGTD--LDPILIDYAKQDFPEARWVVGDLSVDQISETDFD 109 (195)
T ss_dssp HHHHHHH--SCTTCEE---EEETCTTTHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEE
T ss_pred HHHHHHh--ccCCCeE---EEECCCCCHHHHHHHHCCCcEEEEc--CCHHHHHHHHHhCCCCcEEEcccccCCCCCCcee
Confidence 3444444 3344555 9999999999999999999998855 5344444444432 37889999998888889999
Q ss_pred EEEEc-ccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEeeccCCCCcccce
Q 047630 301 IVHSM-HVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGRKLDRGPELREM 379 (392)
Q Consensus 301 lV~s~-~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~~~~~e~ 379 (392)
+|++. .++++ .+.+....++.++.++|||||.+++......... .+.+.++++++||+.+.......... ......
T Consensus 110 ~i~~~~~~~~~-~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~-~~~~~~~l~~~Gf~~~~~~~~~~~~~-~~~~~~ 186 (195)
T 3cgg_A 110 LIVSAGNVMGF-LAEDGREPALANIHRALGADGRAVIGFGAGRGWV-FGDFLEVAERVGLELENAFESWDLKP-FVQGSE 186 (195)
T ss_dssp EEEECCCCGGG-SCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCC-HHHHHHHHHHHTEEEEEEESSTTCCB-CCTTCS
T ss_pred EEEECCcHHhh-cChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcC-HHHHHHHHHHcCCEEeeeecccccCc-CCCCCc
Confidence 99998 56666 4666677899999999999999998865443222 45588999999999887653322111 122333
Q ss_pred eeEEEEEcC
Q 047630 380 YLSALLEKP 388 (392)
Q Consensus 380 ylsai~~Kp 388 (392)
++..+++|+
T Consensus 187 ~~~~v~~k~ 195 (195)
T 3cgg_A 187 FLVAVFTKK 195 (195)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecC
Confidence 445788885
No 21
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.63 E-value=4.2e-15 Score=135.08 Aligned_cols=127 Identities=14% Similarity=0.215 Sum_probs=97.2
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC---CCCCC-cccEEEEcc
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL---PFFDN-TLDIVHSMH 306 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L---pf~d~-sFDlV~s~~ 306 (392)
..++.+| ||||||+|.++..+++.+..++++ |++....+.+.+++.+.+...+...+ ++..+ +||+|++..
T Consensus 50 ~~~~~~v---LdiG~G~G~~~~~l~~~~~~v~~v--D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 50 GRQPERV---LDLGCGEGWLLRALADRGIEAVGV--DGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp HTCCSEE---EEETCTTCHHHHHHHTTTCEEEEE--ESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred cCCCCEE---EEeCCCCCHHHHHHHHCCCEEEEE--cCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECc
Confidence 3344445 999999999999999999999884 45456666666666678888887766 55444 599999999
Q ss_pred cccccCCchhHHHHHHHHHHcccCCcEEEEEeecccc-------------------c---------chHHHHHHHHHHcC
Q 047630 307 VLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG-------------------A---------QLEDVYVPLIESVG 358 (392)
Q Consensus 307 ~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~-------------------~---------~l~~~l~~ll~~aG 358 (392)
+++ . .+...+++++.++|||||++++..+.... . ...+++.++++++|
T Consensus 125 ~l~-~---~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 200 (227)
T 3e8s_A 125 ALL-H---QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAG 200 (227)
T ss_dssp CCC-S---SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTT
T ss_pred hhh-h---hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcC
Confidence 998 3 33346999999999999999998752110 0 02577999999999
Q ss_pred CeEEEEEE
Q 047630 359 FNKLKWVV 366 (392)
Q Consensus 359 f~~i~w~~ 366 (392)
|+++....
T Consensus 201 f~~~~~~~ 208 (227)
T 3e8s_A 201 LRLVSLQE 208 (227)
T ss_dssp EEEEEEEC
T ss_pred CeEEEEec
Confidence 99998774
No 22
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.63 E-value=5e-15 Score=138.13 Aligned_cols=125 Identities=14% Similarity=0.141 Sum_probs=98.2
Q ss_pred cEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhc---CCccEEEeccCcCCCCCCcccEEEEcccccccCC
Q 047630 238 RIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASR---GVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIP 313 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~r---g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~ 313 (392)
.+|||+|||+|.++..+++.+. .++++| ++....+.+.++ ..+.++++|+..+++++++||+|++..+++++
T Consensus 46 ~~vLD~GcG~G~~~~~l~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-- 121 (253)
T 3g5l_A 46 KTVLDLGCGFGWHCIYAAEHGAKKVLGID--LSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI-- 121 (253)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC--
T ss_pred CEEEEECCCCCHHHHHHHHcCCCEEEEEE--CCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh--
Confidence 3459999999999999999887 888854 544555544444 24789999999999999999999999999997
Q ss_pred chhHHHHHHHHHHcccCCcEEEEEeecc-------------cc-c----------------------------chHHHHH
Q 047630 314 TTLLHFLMFDIYRVLRPGGLFWLDHFFC-------------VG-A----------------------------QLEDVYV 351 (392)
Q Consensus 314 ~~~l~~~L~el~RvLKPGG~lii~~~~~-------------~~-~----------------------------~l~~~l~ 351 (392)
.+...+++++.|+|||||++++..... .. . ...+++.
T Consensus 122 -~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 200 (253)
T 3g5l_A 122 -ASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYI 200 (253)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHH
T ss_pred -hhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHH
Confidence 445679999999999999999873210 00 0 0356799
Q ss_pred HHHHHcCCeEEEEEEe
Q 047630 352 PLIESVGFNKLKWVVG 367 (392)
Q Consensus 352 ~ll~~aGf~~i~w~~~ 367 (392)
++++++||+++.....
T Consensus 201 ~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 201 QTLLKNGFQINSVIEP 216 (253)
T ss_dssp HHHHHTTEEEEEEECC
T ss_pred HHHHHcCCeeeeeecC
Confidence 9999999999988743
No 23
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.62 E-value=2.1e-15 Score=132.14 Aligned_cols=122 Identities=16% Similarity=0.166 Sum_probs=94.6
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEEccccc
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHSMHVLS 309 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~ 309 (392)
+.++.+| ||+|||+|.++..+++.+..+++ +|++....+.+.++ ..+.+..+| +++++++||+|++..+++
T Consensus 15 ~~~~~~v---LDiG~G~G~~~~~l~~~~~~v~~--vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~ 86 (170)
T 3i9f_A 15 EGKKGVI---VDYGCGNGFYCKYLLEFATKLYC--IDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFH 86 (170)
T ss_dssp SSCCEEE---EEETCTTCTTHHHHHTTEEEEEE--ECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCST
T ss_pred cCCCCeE---EEECCCCCHHHHHHHhhcCeEEE--EeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchh
Confidence 4444455 99999999999999998767777 55645555555444 347788777 778899999999999999
Q ss_pred ccCCchhHHHHHHHHHHcccCCcEEEEEeecccccc---------hHHHHHHHHHHcCCeEEEEE
Q 047630 310 NWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQ---------LEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 310 ~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~---------l~~~l~~ll~~aGf~~i~w~ 365 (392)
++. +...+++++.|+|||||++++.++...... ..+++.++++ ||+.++..
T Consensus 87 ~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 87 DMD---DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp TCS---CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred ccc---CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 973 445799999999999999999987543221 1566888888 99999876
No 24
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.62 E-value=4.2e-15 Score=142.10 Aligned_cols=129 Identities=17% Similarity=0.203 Sum_probs=99.5
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc-CCEEEEEecCCCchhHHHHHh----cC---CccEEEeccCcCCCCCCcccEE
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER-NITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQRLPFFDNTLDIV 302 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~-g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~Lpf~d~sFDlV 302 (392)
+.++.+| ||||||+|.++..+++. +..++++| ++..+.+.+.+ .+ .+.++++|...+|+++++||+|
T Consensus 80 ~~~~~~v---LDiGcG~G~~~~~l~~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v 154 (297)
T 2o57_A 80 LQRQAKG---LDLGAGYGGAARFLVRKFGVSIDCLN--IAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFI 154 (297)
T ss_dssp CCTTCEE---EEETCTTSHHHHHHHHHHCCEEEEEE--SCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCEE---EEeCCCCCHHHHHHHHHhCCEEEEEe--CCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEE
Confidence 3444445 99999999999999986 88888855 53444443322 22 3789999999999999999999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc------------------chHHHHHHHHHHcCCeEEEE
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA------------------QLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~------------------~l~~~l~~ll~~aGf~~i~w 364 (392)
++..+++|+.+ ...+++++.|+|||||+|++.+...... ...+.+.++++++||+.++.
T Consensus 155 ~~~~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 155 WSQDAFLHSPD---KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRT 231 (297)
T ss_dssp EEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEE
T ss_pred EecchhhhcCC---HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 99999999844 5679999999999999999987532210 01556889999999999987
Q ss_pred EEe
Q 047630 365 VVG 367 (392)
Q Consensus 365 ~~~ 367 (392)
...
T Consensus 232 ~~~ 234 (297)
T 2o57_A 232 FSR 234 (297)
T ss_dssp EEC
T ss_pred EEC
Confidence 643
No 25
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.62 E-value=7.2e-15 Score=138.44 Aligned_cols=125 Identities=25% Similarity=0.307 Sum_probs=97.2
Q ss_pred EEEEEcCCcchHHHHHHH-cCCEEEEEecCCCchhHHHHHh----cC---CccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMME-RNITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
.|||||||+|.++..+++ .+..++++| ++....+.+.+ .+ .+.+..+|...+|+++++||+|++..+++|
T Consensus 64 ~vLDiGcG~G~~~~~l~~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 141 (273)
T 3bus_A 64 RVLDVGCGIGKPAVRLATARDVRVTGIS--ISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHH 141 (273)
T ss_dssp EEEEESCTTSHHHHHHHHHSCCEEEEEE--SCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTT
T ss_pred EEEEeCCCCCHHHHHHHHhcCCEEEEEe--CCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhh
Confidence 449999999999999988 478888855 43444443322 23 378899999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEeeccccc---------------------chHHHHHHHHHHcCCeEEEEEEee
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA---------------------QLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~---------------------~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
+.+ ...+++++.|+|||||++++.++..... ...+.+.++++++||+.+.+....
T Consensus 142 ~~~---~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 217 (273)
T 3bus_A 142 MPD---RGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDIS 217 (273)
T ss_dssp SSC---HHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEECH
T ss_pred CCC---HHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEECc
Confidence 733 3579999999999999999887543210 014668899999999999887553
No 26
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.61 E-value=7.9e-15 Score=136.33 Aligned_cols=128 Identities=13% Similarity=0.143 Sum_probs=98.9
Q ss_pred cEEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHHHHHhc----CCccEEEeccCcCCCCCCcccEEEEcccccccC
Q 047630 238 RIGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNFIASR----GVVPLYISISQRLPFFDNTLDIVHSMHVLSNWI 312 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~~aa~r----g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~ 312 (392)
.+|||||||+|.++..+++.+ ..+++ +|++....+.+.++ ..+.++++|...+++++++||+|++..+++|+
T Consensus 95 ~~vLDiG~G~G~~~~~l~~~~~~~v~~--vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~- 171 (254)
T 1xtp_A 95 SRALDCGAGIGRITKNLLTKLYATTDL--LEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYL- 171 (254)
T ss_dssp SEEEEETCTTTHHHHHTHHHHCSEEEE--EESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGS-
T ss_pred CEEEEECCCcCHHHHHHHHhhcCEEEE--EeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhC-
Confidence 345999999999999999874 45888 45544555544443 23788899999999989999999999999885
Q ss_pred CchhHHHHHHHHHHcccCCcEEEEEeeccccc------------chHHHHHHHHHHcCCeEEEEEEee
Q 047630 313 PTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA------------QLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 313 ~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~------------~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
++.+...+++++.|+|||||++++.+...... ...+.+.++++++||+.++.....
T Consensus 172 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 172 TDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQE 239 (254)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEECT
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeecC
Confidence 44567789999999999999999987422111 125679999999999999887543
No 27
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.61 E-value=5.3e-15 Score=132.12 Aligned_cols=153 Identities=18% Similarity=0.227 Sum_probs=106.5
Q ss_pred HHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cC--CccEEEeccCcCCCCCCccc
Q 047630 227 EVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRLPFFDNTLD 300 (392)
Q Consensus 227 ~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~Lpf~d~sFD 300 (392)
+.+...++.+| ||+|||+|.++..+++.+..++++|++ ....+.+.+ .+ .+.+..+|...+++ +++||
T Consensus 26 ~~~~~~~~~~v---LdiG~G~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D 99 (199)
T 2xvm_A 26 EAVKVVKPGKT---LDLGCGNGRNSLYLAANGYDVDAWDKN--AMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYD 99 (199)
T ss_dssp HHTTTSCSCEE---EEETCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEE
T ss_pred HHhhccCCCeE---EEEcCCCCHHHHHHHHCCCeEEEEECC--HHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCce
Confidence 33444444545 999999999999999999999995544 344433222 22 37888999999888 88999
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc----------chHHHHHHHHHHcCCeEEEEEEee--
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA----------QLEDVYVPLIESVGFNKLKWVVGR-- 368 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~----------~l~~~l~~ll~~aGf~~i~w~~~~-- 368 (392)
+|++..+++++ +++....+++++.++|||||++++........ -..+++.+++++ |+.+.+....
T Consensus 100 ~v~~~~~l~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~~~~ 176 (199)
T 2xvm_A 100 FILSTVVLMFL-EAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNEDVGE 176 (199)
T ss_dssp EEEEESCGGGS-CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEECCEEE
T ss_pred EEEEcchhhhC-CHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEecccceE
Confidence 99999999885 55567889999999999999988766433211 014557788876 9998876431
Q ss_pred --ccCC-CCcccceeeEEEEEcC
Q 047630 369 --KLDR-GPELREMYLSALLEKP 388 (392)
Q Consensus 369 --k~d~-~~~~~e~ylsai~~Kp 388 (392)
..+. +......+...+.+||
T Consensus 177 ~~~~~~~g~~~~~~~~~~~arK~ 199 (199)
T 2xvm_A 177 LHRTDANGNRIKLRFATMLARKK 199 (199)
T ss_dssp EEEECTTSCEEEEEEEEEEEECC
T ss_pred EEeecCCCCeeeEEEEEEEEecC
Confidence 1111 1122223556788887
No 28
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.61 E-value=1.4e-14 Score=133.41 Aligned_cols=141 Identities=15% Similarity=0.164 Sum_probs=102.6
Q ss_pred HHHHHHHHHhhCC-CCcccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc----CCccEEEeccCcCC
Q 047630 221 LDFSIDEVLATKK-PGTIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR----GVVPLYISISQRLP 293 (392)
Q Consensus 221 ~~~lI~~ll~l~~-~~~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r----g~i~~~~~d~~~Lp 293 (392)
.+...+.++.+.+ ...-.+|||+|||+|.++..+++. +..++++| ++....+.+.++ +.+.++.+|...++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~ 105 (234)
T 3dtn_A 28 FDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVD--MSEKMLEIAKNRFRGNLKVKYIEADYSKYD 105 (234)
T ss_dssp HHHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEE--SCHHHHHHHHHHTCSCTTEEEEESCTTTCC
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEE--CCHHHHHHHHHhhccCCCEEEEeCchhccC
Confidence 3444454544332 112234599999999999999997 67888855 534454444433 24788999999998
Q ss_pred CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccc----------------------------
Q 047630 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQ---------------------------- 345 (392)
Q Consensus 294 f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~---------------------------- 345 (392)
+. ++||+|++..+++++ ++.....+++++.|+|||||++++.++......
T Consensus 106 ~~-~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (234)
T 3dtn_A 106 FE-EKYDMVVSALSIHHL-EDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGY 183 (234)
T ss_dssp CC-SCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC
T ss_pred CC-CCceEEEEeCccccC-CHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 87 899999999999986 555556799999999999999999875432110
Q ss_pred ---------hHHHHHHHHHHcCCeEEEEE
Q 047630 346 ---------LEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 346 ---------l~~~l~~ll~~aGf~~i~w~ 365 (392)
..+++.++++++||+.++..
T Consensus 184 ~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 212 (234)
T 3dtn_A 184 ERSKLDKDIEMNQQLNWLKEAGFRDVSCI 212 (234)
T ss_dssp ----CCCCCBHHHHHHHHHHTTCEEEEEE
T ss_pred HhcccccccCHHHHHHHHHHcCCCceeee
Confidence 13567889999999998765
No 29
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.61 E-value=3.7e-15 Score=140.46 Aligned_cols=126 Identities=17% Similarity=0.237 Sum_probs=97.5
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEccccccc
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~ 311 (392)
.++.+| ||||||+|.++..+++.+..++| +|++..+.+.+.++..+.++++|++.+|+++++||+|++..+++|+
T Consensus 33 ~~~~~v---LDiGcG~G~~~~~l~~~~~~v~g--vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 107 (261)
T 3ege_A 33 PKGSVI---ADIGAGTGGYSVALANQGLFVYA--VEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHF 107 (261)
T ss_dssp CTTCEE---EEETCTTSHHHHHHHTTTCEEEE--ECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGC
T ss_pred CCCCEE---EEEcCcccHHHHHHHhCCCEEEE--EeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhc
Confidence 344445 99999999999999999999998 5553444443333335789999999999999999999999999998
Q ss_pred CCchhHHHHHHHHHHcccCCcEEEEEeeccccc--------------------chHHHHHHHHHHcCCeEEEEEEe
Q 047630 312 IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA--------------------QLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 312 ~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~--------------------~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
.+...++++++|+|| ||++++.++..... ...+.+. +++++||+.+.....
T Consensus 108 ---~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 108 ---SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIPF 178 (261)
T ss_dssp ---SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEEC
T ss_pred ---cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEEe
Confidence 455679999999999 99887776532110 0145577 999999998887654
No 30
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.60 E-value=1.5e-14 Score=136.91 Aligned_cols=129 Identities=12% Similarity=-0.046 Sum_probs=97.6
Q ss_pred CCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc-----------------------CCccEEEecc
Q 047630 233 KPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR-----------------------GVVPLYISIS 289 (392)
Q Consensus 233 ~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-----------------------g~i~~~~~d~ 289 (392)
++.+| ||+|||+|..+..|++.|..|+| +|++..+.+.+.++ ..+.++++|+
T Consensus 68 ~~~~v---LD~GCG~G~~~~~La~~G~~V~g--vD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 68 SGLRV---FFPLCGKAIEMKWFADRGHTVVG--VEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp CSCEE---EETTCTTCTHHHHHHHTTCEEEE--ECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCeE---EEeCCCCcHHHHHHHHCCCeEEE--EECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 44555 99999999999999999999999 55644555444322 2368899999
Q ss_pred CcCCCCC-CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec-ccc-------cchHHHHHHHHHHcCCe
Q 047630 290 QRLPFFD-NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF-CVG-------AQLEDVYVPLIESVGFN 360 (392)
Q Consensus 290 ~~Lpf~d-~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~-~~~-------~~l~~~l~~ll~~aGf~ 360 (392)
..+++.+ ++||+|++..+++++ +++....+++++.|+|||||+|++..+. ... .-..+++.++++. +|+
T Consensus 143 ~~l~~~~~~~FD~V~~~~~l~~l-~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~ 220 (252)
T 2gb4_A 143 FDLPRANIGKFDRIWDRGALVAI-NPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCS 220 (252)
T ss_dssp TTGGGGCCCCEEEEEESSSTTTS-CGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEE
T ss_pred ccCCcccCCCEEEEEEhhhhhhC-CHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeE
Confidence 9998865 899999999999875 5566678999999999999999755432 111 0125678888887 599
Q ss_pred EEEEEEee
Q 047630 361 KLKWVVGR 368 (392)
Q Consensus 361 ~i~w~~~~ 368 (392)
++.+....
T Consensus 221 v~~~~~~~ 228 (252)
T 2gb4_A 221 MQCLEEVD 228 (252)
T ss_dssp EEEEEEEE
T ss_pred EEEEeccc
Confidence 98887554
No 31
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.59 E-value=5.6e-15 Score=137.69 Aligned_cols=127 Identities=15% Similarity=0.145 Sum_probs=95.4
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc-CCEEEEEecCCCchhHHHHH----hcC---CccEEEeccCcCCCCCCcccEE
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER-NITIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQRLPFFDNTLDIV 302 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~-g~~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~~Lpf~d~sFDlV 302 (392)
+.++.+| ||||||+|.++..+++. +..++++| ++..+.+.+. +.+ .+.+.++|+..+++ +++||+|
T Consensus 34 ~~~~~~V---LDiGcG~G~~~~~la~~~~~~v~gvD--~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V 107 (256)
T 1nkv_A 34 MKPGTRI---LDLGSGSGEMLCTWARDHGITGTGID--MSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVA 107 (256)
T ss_dssp CCTTCEE---EEETCTTCHHHHHHHHHTCCEEEEEE--SCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEE
T ss_pred CCCCCEE---EEECCCCCHHHHHHHHhcCCeEEEEe--CCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEE
Confidence 3344445 99999999999999985 77888854 5444444332 233 37889999999988 8899999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc------------------chHHHHHHHHHHcCCeEEEE
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA------------------QLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~------------------~l~~~l~~ll~~aGf~~i~w 364 (392)
++..+++++.+ ...+|+++.|+|||||++++.+...... ...+.+.++++++||+.+..
T Consensus 108 ~~~~~~~~~~~---~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 108 ACVGATWIAGG---FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEM 184 (256)
T ss_dssp EEESCGGGTSS---SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEE
T ss_pred EECCChHhcCC---HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEE
Confidence 99999988743 4569999999999999999876432111 01466899999999998875
Q ss_pred EE
Q 047630 365 VV 366 (392)
Q Consensus 365 ~~ 366 (392)
..
T Consensus 185 ~~ 186 (256)
T 1nkv_A 185 VL 186 (256)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 32
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.59 E-value=2.9e-14 Score=130.10 Aligned_cols=151 Identities=13% Similarity=0.109 Sum_probs=103.7
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhHHHHHhc----C-------CccEEEeccCcCCCC
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFNNFIASR----G-------VVPLYISISQRLPFF 295 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~~~aa~r----g-------~i~~~~~d~~~Lpf~ 295 (392)
+...++.+| ||||||+|.++..+++.+ ..++++| ++....+.+.++ + .+.++.+|...+++.
T Consensus 25 l~~~~~~~v---LDiGcG~G~~~~~l~~~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 99 (219)
T 3jwg_A 25 LKSVNAKKV---IDLGCGEGNLLSLLLKDKSFEQITGVD--VSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKR 99 (219)
T ss_dssp HHHTTCCEE---EEETCTTCHHHHHHHTSTTCCEEEEEE--SCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGG
T ss_pred HhhcCCCEE---EEecCCCCHHHHHHHhcCCCCEEEEEE--CCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccc
Confidence 333444555 999999999999999976 5788855 534444443332 1 478899999888888
Q ss_pred CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc----------------------ccchHHHHHHH
Q 047630 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV----------------------GAQLEDVYVPL 353 (392)
Q Consensus 296 d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~----------------------~~~l~~~l~~l 353 (392)
+++||+|++..+++|+ ++..+..+++++.|+|||||++++...... .+++.+.+.++
T Consensus 100 ~~~fD~V~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 178 (219)
T 3jwg_A 100 FSGYDAATVIEVIEHL-DENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKV 178 (219)
T ss_dssp GTTCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHH
T ss_pred cCCCCEEEEHHHHHhC-CHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHH
Confidence 8999999999999996 555567899999999999997776643211 11122333388
Q ss_pred HHHcCCeEEEEEEeeccCCCCcccceeeEEEEEcC
Q 047630 354 IESVGFNKLKWVVGRKLDRGPELREMYLSALLEKP 388 (392)
Q Consensus 354 l~~aGf~~i~w~~~~k~d~~~~~~e~ylsai~~Kp 388 (392)
++++||++....++.. . ...+...-.+++.|-
T Consensus 179 ~~~~Gf~v~~~~~g~~-~--~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 179 AEKYGYSVRFLQIGEI-D--DEFGSPTQMGVFTLG 210 (219)
T ss_dssp HHHHTEEEEEEEESCC-C--TTSCCSEEEEEEEEC
T ss_pred HHHCCcEEEEEecCCc-c--ccCCCCeEEEEEecc
Confidence 9999997765544432 2 123332335788875
No 33
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.59 E-value=2.8e-14 Score=131.50 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=83.3
Q ss_pred HHHHHHHHHhhC-CCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----C-CccEEEeccCcCCC
Q 047630 221 LDFSIDEVLATK-KPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----G-VVPLYISISQRLPF 294 (392)
Q Consensus 221 ~~~lI~~ll~l~-~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g-~i~~~~~d~~~Lpf 294 (392)
...+++.+.... ++.+ |||+|||+|.++..+++. ..++++| ++..+.+.+.++ + .+.++++|...+++
T Consensus 20 ~~~~~~~~~~~~~~~~~---vLdiG~G~G~~~~~l~~~-~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 93 (243)
T 3d2l_A 20 YPEWVAWVLEQVEPGKR---IADIGCGTGTATLLLADH-YEVTGVD--LSEEMLEIAQEKAMETNRHVDFWVQDMRELEL 93 (243)
T ss_dssp HHHHHHHHHHHSCTTCE---EEEESCTTCHHHHHHTTT-SEEEEEE--SCHHHHHHHHHHHHHTTCCCEEEECCGGGCCC
T ss_pred HHHHHHHHHHHcCCCCe---EEEecCCCCHHHHHHhhC-CeEEEEE--CCHHHHHHHHHhhhhcCCceEEEEcChhhcCC
Confidence 344455555433 3344 499999999999999988 7888855 534444433322 2 47889999988887
Q ss_pred CCCcccEEEEcc-cccccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 295 FDNTLDIVHSMH-VLSNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 295 ~d~sFDlV~s~~-~l~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
+ ++||+|++.. +++|+.+......+++++.++|||||+++++
T Consensus 94 ~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 94 P-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp S-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 6 7899999986 8888767778889999999999999999874
No 34
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.59 E-value=1.2e-14 Score=138.39 Aligned_cols=111 Identities=14% Similarity=0.213 Sum_probs=85.1
Q ss_pred HHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----------CCccEEEeccCcC
Q 047630 223 FSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----------GVVPLYISISQRL 292 (392)
Q Consensus 223 ~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----------g~i~~~~~d~~~L 292 (392)
..+..++...++.+| ||||||+|.++..+++.+..++|+| ++..+.+.+.++ ..+.+..++...+
T Consensus 47 ~~l~~~l~~~~~~~v---LDiGcG~G~~~~~l~~~~~~v~gvD--~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 121 (293)
T 3thr_A 47 AWLLGLLRQHGCHRV---LDVACGTGVDSIMLVEEGFSVTSVD--ASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTL 121 (293)
T ss_dssp HHHHHHHHHTTCCEE---EETTCTTSHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGH
T ss_pred HHHHHHhcccCCCEE---EEecCCCCHHHHHHHHCCCeEEEEE--CCHHHHHHHHHhhhhcccccccceeeEeecChhhC
Confidence 344444545555555 9999999999999999999999855 434444433321 1256788888888
Q ss_pred C---CCCCcccEEEEc-ccccccCC----chhHHHHHHHHHHcccCCcEEEEEe
Q 047630 293 P---FFDNTLDIVHSM-HVLSNWIP----TTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 293 p---f~d~sFDlV~s~-~~l~~~~~----~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+ +++++||+|++. .+++|+.+ .+....++++++|+|||||+|++..
T Consensus 122 ~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 122 DKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp HHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 7 889999999998 89999755 4557889999999999999998774
No 35
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.59 E-value=1e-14 Score=138.72 Aligned_cols=125 Identities=21% Similarity=0.290 Sum_probs=97.8
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----C---CccEEEeccCcCC-CCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----G---VVPLYISISQRLP-FFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g---~i~~~~~d~~~Lp-f~d~sFDlV~s~~~l~~ 310 (392)
.|||||||+|.++..+++.+..++++| ++..+.+.+.++ + .+.++++|...++ +.+++||+|++..+++|
T Consensus 71 ~vLDiGcG~G~~~~~l~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 148 (285)
T 4htf_A 71 RVLDAGGGEGQTAIKMAERGHQVILCD--LSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEW 148 (285)
T ss_dssp EEEEETCTTCHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGG
T ss_pred EEEEeCCcchHHHHHHHHCCCEEEEEE--CCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhc
Confidence 459999999999999999999999955 434444433332 2 3678999999887 78899999999999999
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEeecccc------------------------------cchHHHHHHHHHHcCCe
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG------------------------------AQLEDVYVPLIESVGFN 360 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~------------------------------~~l~~~l~~ll~~aGf~ 360 (392)
+. +...+++++.|+|||||++++..+.... .-..+++.++++++||+
T Consensus 149 ~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 225 (285)
T 4htf_A 149 VA---DPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQ 225 (285)
T ss_dssp CS---CHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCE
T ss_pred cc---CHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCc
Confidence 73 3457999999999999999988752111 00156799999999999
Q ss_pred EEEEEEee
Q 047630 361 KLKWVVGR 368 (392)
Q Consensus 361 ~i~w~~~~ 368 (392)
++.+....
T Consensus 226 v~~~~~~~ 233 (285)
T 4htf_A 226 IMGKTGVR 233 (285)
T ss_dssp EEEEEEES
T ss_pred eeeeeeEE
Confidence 99887653
No 36
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.59 E-value=5.7e-15 Score=137.75 Aligned_cols=123 Identities=17% Similarity=0.180 Sum_probs=95.0
Q ss_pred EEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHH----hcC---CccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
.|||||||+|.++..+++.+. .++++| ++....+.+. +.+ .+.++++|...+|+++++||+|++..+++|
T Consensus 49 ~vLDiG~G~G~~~~~l~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 126 (257)
T 3f4k_A 49 KIADIGCGTGGQTLFLADYVKGQITGID--LFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIYN 126 (257)
T ss_dssp EEEEETCTTSHHHHHHHHHCCSEEEEEE--SCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSCC
T ss_pred eEEEeCCCCCHHHHHHHHhCCCeEEEEE--CCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHhh
Confidence 349999999999999999765 888855 4344444332 223 278899999999999999999999999988
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEeeccccc-----------------chHHHHHHHHHHcCCeEEEEEEe
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA-----------------QLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~-----------------~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
+ + ...+++++.|+|||||++++.+...... ...+.+.++++++||+.+.....
T Consensus 127 ~-~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 196 (257)
T 3f4k_A 127 I-G---FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHFIL 196 (257)
T ss_dssp C-C---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEEEC
T ss_pred c-C---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEEEC
Confidence 6 3 4579999999999999999987431111 01456889999999999986544
No 37
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.59 E-value=1.9e-15 Score=143.52 Aligned_cols=111 Identities=13% Similarity=0.089 Sum_probs=86.5
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccE
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDI 301 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDl 301 (392)
+.+++.+....+.. ..|||||||+|.++..|++.+.+|+|+ |++..+.+.+.++..+.+.+++++.+|+++++||+
T Consensus 27 ~~l~~~l~~~~~~~--~~vLDvGcGtG~~~~~l~~~~~~v~gv--D~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~ 102 (257)
T 4hg2_A 27 RALFRWLGEVAPAR--GDALDCGCGSGQASLGLAEFFERVHAV--DPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDV 102 (257)
T ss_dssp HHHHHHHHHHSSCS--SEEEEESCTTTTTHHHHHTTCSEEEEE--ESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEE
T ss_pred HHHHHHHHHhcCCC--CCEEEEcCCCCHHHHHHHHhCCEEEEE--eCcHHhhhhhhhcCCceeehhhhhhhcccCCcccE
Confidence 44556665554322 234999999999999999999999994 55444444444444589999999999999999999
Q ss_pred EEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec
Q 047630 302 VHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 302 V~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~ 340 (392)
|++..++|++ + .+.++++++|+|||||+|++..+.
T Consensus 103 v~~~~~~h~~-~---~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 103 AIAAQAMHWF-D---LDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp EEECSCCTTC-C---HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEeeehhHh-h---HHHHHHHHHHHcCCCCEEEEEECC
Confidence 9999999664 4 346999999999999999887654
No 38
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.59 E-value=5.4e-15 Score=143.03 Aligned_cols=123 Identities=15% Similarity=0.043 Sum_probs=97.8
Q ss_pred EEEEEcCCcchHHHHHHHc-CCEEEEEecCCCchhHHHHHh----cC---CccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMMER-NITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
.|||+|||+|.++..+++. +..++++| ++....+.+.+ .+ .+.++++|+..+|+++++||+|++..++++
T Consensus 120 ~vLDiGcG~G~~~~~la~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 197 (312)
T 3vc1_A 120 TLVDAGCGRGGSMVMAHRRFGSRVEGVT--LSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMY 197 (312)
T ss_dssp EEEEESCTTSHHHHHHHHHHCCEEEEEE--SCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGG
T ss_pred EEEEecCCCCHHHHHHHHHcCCEEEEEe--CCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhh
Confidence 3499999999999999997 88999855 43444443332 33 378999999999999999999999999998
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEeecccccc-------------------hHHHHHHHHHHcCCeEEEEEEe
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQ-------------------LEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~-------------------l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
+ + ...+++++.|+|||||++++.+....... ..+++.++++++||+.+.....
T Consensus 198 ~-~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 198 V-D---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp S-C---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred C-C---HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 7 3 56799999999999999998875332210 1567899999999999988754
No 39
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.59 E-value=1.1e-14 Score=134.33 Aligned_cols=135 Identities=16% Similarity=0.117 Sum_probs=102.1
Q ss_pred HHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhcC---CccEEEeccCcCCCCCCccc
Q 047630 225 IDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASRG---VVPLYISISQRLPFFDNTLD 300 (392)
Q Consensus 225 I~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~rg---~i~~~~~d~~~Lpf~d~sFD 300 (392)
+..++...++.+| ||||||+|.++..+++.+. .++++| ++....+.+.++. .+.+.++|...+++++++||
T Consensus 35 l~~~~~~~~~~~v---LdiG~G~G~~~~~l~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD 109 (243)
T 3bkw_A 35 LRAMLPEVGGLRI---VDLGCGFGWFCRWAHEHGASYVLGLD--LSEKMLARARAAGPDTGITYERADLDKLHLPQDSFD 109 (243)
T ss_dssp HHHHSCCCTTCEE---EEETCTTCHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEE
T ss_pred HHHhccccCCCEE---EEEcCcCCHHHHHHHHCCCCeEEEEc--CCHHHHHHHHHhcccCCceEEEcChhhccCCCCCce
Confidence 4444433344444 9999999999999999888 888855 5345555554442 36788999999998889999
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc--------------------cc----------------
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV--------------------GA---------------- 344 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~--------------------~~---------------- 344 (392)
+|++..+++++. +...+++++.++|||||++++...... ..
T Consensus 110 ~v~~~~~l~~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (243)
T 3bkw_A 110 LAYSSLALHYVE---DVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKG 186 (243)
T ss_dssp EEEEESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHS
T ss_pred EEEEeccccccc---hHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCc
Confidence 999999999873 456799999999999999988753100 00
Q ss_pred -----chHHHHHHHHHHcCCeEEEEEEe
Q 047630 345 -----QLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 345 -----~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
...+++.++++++||+.+.+...
T Consensus 187 ~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 187 VVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp CCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred eEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 02567999999999999988754
No 40
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.58 E-value=8.8e-15 Score=137.88 Aligned_cols=124 Identities=16% Similarity=0.175 Sum_probs=95.8
Q ss_pred EEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHHHHHh----cC---CccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
+|||||||+|.++..+++.+ ..++++| ++....+.+.+ .+ .+.++++|...+++++++||+|++..++++
T Consensus 49 ~vLDiGcG~G~~~~~la~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 126 (267)
T 3kkz_A 49 LIADIGCGTGGQTMVLAGHVTGQVTGLD--FLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYN 126 (267)
T ss_dssp EEEEETCTTCHHHHHHHTTCSSEEEEEE--SCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGG
T ss_pred EEEEeCCCCCHHHHHHHhccCCEEEEEe--CCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCcee
Confidence 34999999999999999974 4888855 53444443322 23 378999999999999999999999999988
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEeeccccc-----------------chHHHHHHHHHHcCCeEEEEEEee
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA-----------------QLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~-----------------~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
+ + ...+++++.|+|||||++++.+...... ...+.+.++++++||+.+......
T Consensus 127 ~-~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 127 I-G---FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp T-C---HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEECC
T ss_pred c-C---HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEECC
Confidence 6 3 3569999999999999999987531111 014568899999999999887543
No 41
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.58 E-value=2.4e-14 Score=130.23 Aligned_cols=123 Identities=15% Similarity=0.179 Sum_probs=96.3
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCccc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLD 300 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFD 300 (392)
.+.+++.+....++.+| ||||||+|.++..++ ..++++|++. . .+.+.+++...+++++++||
T Consensus 55 ~~~~~~~l~~~~~~~~v---LDiG~G~G~~~~~l~---~~v~~~D~s~--~---------~~~~~~~d~~~~~~~~~~fD 117 (215)
T 2zfu_A 55 VDRIARDLRQRPASLVV---ADFGCGDCRLASSIR---NPVHCFDLAS--L---------DPRVTVCDMAQVPLEDESVD 117 (215)
T ss_dssp HHHHHHHHHTSCTTSCE---EEETCTTCHHHHHCC---SCEEEEESSC--S---------STTEEESCTTSCSCCTTCEE
T ss_pred HHHHHHHHhccCCCCeE---EEECCcCCHHHHHhh---ccEEEEeCCC--C---------CceEEEeccccCCCCCCCEe
Confidence 44566655544444556 999999999998874 6788866655 2 36899999999999999999
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEE
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
+|++..++|+ .+...+++++.++|||||.+++.++..... ..+.+.++++++||+.+...
T Consensus 118 ~v~~~~~l~~----~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~-~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 118 VAVFCLSLMG----TNIRDFLEEANRVLKPGGLLKVAEVSSRFE-DVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp EEEEESCCCS----SCHHHHHHHHHHHEEEEEEEEEEECGGGCS-CHHHHHHHHHHTTEEEEEEE
T ss_pred EEEEehhccc----cCHHHHHHHHHHhCCCCeEEEEEEcCCCCC-CHHHHHHHHHHCCCEEEEEe
Confidence 9999999963 345679999999999999999987654332 34568999999999988744
No 42
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.58 E-value=3.3e-14 Score=135.21 Aligned_cols=123 Identities=14% Similarity=0.153 Sum_probs=94.0
Q ss_pred EEEEEcCCcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhc----C---CccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMME-RNITIVTTSMNLNGPFNNFIASR----G---VVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~r----g---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
.|||||||+|.++..+++ .+..++++| ++....+.+.++ + .+.+..+|...+| ++||+|++..+++|
T Consensus 67 ~vLDiGcG~G~~~~~l~~~~~~~v~gvd--~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~ 141 (287)
T 1kpg_A 67 TLLDVGCGWGATMMRAVEKYDVNVVGLT--LSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEH 141 (287)
T ss_dssp EEEEETCTTSHHHHHHHHHHCCEEEEEE--SCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGG
T ss_pred EEEEECCcccHHHHHHHHHcCCEEEEEE--CCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchhh
Confidence 349999999999999994 678888855 434444433332 2 3678888988776 78999999999999
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEeeccccc-------------------------------chHHHHHHHHHHcCC
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA-------------------------------QLEDVYVPLIESVGF 359 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~-------------------------------~l~~~l~~ll~~aGf 359 (392)
+ ++.+...+++++.|+|||||++++.++..... ...+++.++++++||
T Consensus 142 ~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf 220 (287)
T 1kpg_A 142 F-GHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGF 220 (287)
T ss_dssp T-CTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTC
T ss_pred c-ChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCc
Confidence 6 33455689999999999999999887543210 015678899999999
Q ss_pred eEEEEEEe
Q 047630 360 NKLKWVVG 367 (392)
Q Consensus 360 ~~i~w~~~ 367 (392)
+.+.+...
T Consensus 221 ~~~~~~~~ 228 (287)
T 1kpg_A 221 TVTRVQSL 228 (287)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99998754
No 43
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.58 E-value=8.7e-15 Score=140.46 Aligned_cols=126 Identities=16% Similarity=0.143 Sum_probs=98.3
Q ss_pred EEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc---------CCccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 240 GLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR---------GVVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r---------g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
|||||||+|.++..+++.+..++++| ++..+.+.+.++ ..+.++++|+..+++ +++||+|++.....+
T Consensus 86 vLDlGcG~G~~~~~l~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~ 162 (299)
T 3g2m_A 86 VLELAAGMGRLTFPFLDLGWEVTALE--LSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSIN 162 (299)
T ss_dssp EEEETCTTTTTHHHHHTTTCCEEEEE--SCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHT
T ss_pred EEEEeccCCHHHHHHHHcCCeEEEEE--CCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccc
Confidence 49999999999999999999999955 434444433332 237899999999987 789999998755555
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEeeccccc----------------------------------------------
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA---------------------------------------------- 344 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~---------------------------------------------- 344 (392)
+.+++++..+|+++.|+|||||+|++..+.....
T Consensus 163 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T 3g2m_A 163 ELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPADETTDPF 242 (299)
T ss_dssp TSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESCC--CCC
T ss_pred cCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEeccCCCCcE
Confidence 5677777899999999999999999876432110
Q ss_pred ---------chHHHHHHHHHHcCCeEEEEEEee
Q 047630 345 ---------QLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 345 ---------~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
-..+++.++++++||+++......
T Consensus 243 ~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 243 VVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp CEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred EEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 026779999999999999887554
No 44
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.58 E-value=1.7e-14 Score=133.93 Aligned_cols=127 Identities=17% Similarity=0.154 Sum_probs=98.0
Q ss_pred EEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHHHHHhcC------CccEEEeccCcCCCCCCcccEEEEccccccc
Q 047630 239 IGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNFIASRG------VVPLYISISQRLPFFDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~~aa~rg------~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~ 311 (392)
.|||||||+|.++..+++.+ ..++++| ++..+.+.+.++. .+.++.+|...+++++++||+|++..+++++
T Consensus 82 ~vLDiGcG~G~~~~~l~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 159 (241)
T 2ex4_A 82 CALDCGAGIGRITKRLLLPLFREVDMVD--ITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHL 159 (241)
T ss_dssp EEEEETCTTTHHHHHTTTTTCSEEEEEE--SCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred EEEEECCCCCHHHHHHHHhcCCEEEEEe--CCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhhC
Confidence 45999999999999998874 4788854 5344444443331 2578899999999888899999999999886
Q ss_pred CCchhHHHHHHHHHHcccCCcEEEEEeecccc-----------cchHHHHHHHHHHcCCeEEEEEEee
Q 047630 312 IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG-----------AQLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 312 ~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~-----------~~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
++..+..+++++.|+|||||++++.+..... ....+++.++++++||+.+++....
T Consensus 160 -~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 160 -TDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQE 226 (241)
T ss_dssp -CHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEECC
T ss_pred -CHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeecC
Confidence 4444568999999999999999997653221 0126679999999999999987554
No 45
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=1.4e-14 Score=133.84 Aligned_cols=129 Identities=10% Similarity=0.062 Sum_probs=100.3
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----C---CccEEEeccCcCCCCCCcccEEEEccccccc
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----G---VVPLYISISQRLPFFDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~ 311 (392)
+|||||||+|.++..+++.+..+++ +|++....+.+.++ + .+.++++|+..++ ++++||+|++..+++++
T Consensus 69 ~vLDiGcG~G~~~~~l~~~~~~v~g--vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~ 145 (235)
T 3lcc_A 69 RALVPGCGGGHDVVAMASPERFVVG--LDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAI 145 (235)
T ss_dssp EEEEETCTTCHHHHHHCBTTEEEEE--ECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTS
T ss_pred CEEEeCCCCCHHHHHHHhCCCeEEE--EECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcC
Confidence 4599999999999999998888888 55544444433332 1 2688999998877 45699999999999885
Q ss_pred CCchhHHHHHHHHHHcccCCcEEEEEeeccccc-------chHHHHHHHHHHcCCeEEEEEEeeccC
Q 047630 312 IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA-------QLEDVYVPLIESVGFNKLKWVVGRKLD 371 (392)
Q Consensus 312 ~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~-------~l~~~l~~ll~~aGf~~i~w~~~~k~d 371 (392)
+++....+++++.++|||||+|++..+..... -..+++.++++++||+.+........-
T Consensus 146 -~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 211 (235)
T 3lcc_A 146 -EPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENPHAI 211 (235)
T ss_dssp -CGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECTTCC
T ss_pred -CHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecCCcc
Confidence 55677889999999999999999887643221 125679999999999999888666433
No 46
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.58 E-value=2.6e-14 Score=129.96 Aligned_cols=145 Identities=13% Similarity=0.148 Sum_probs=100.8
Q ss_pred cEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----CCccEEEeccCcCCCCCCcccEEEEcccccccCC
Q 047630 238 RIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----GVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIP 313 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~ 313 (392)
..|||+|||+|.++..+++.+..++++| ++..+.+.+.++ +.+.++++|+..++ ++++||+|++..+++|+.+
T Consensus 53 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~ 129 (216)
T 3ofk_A 53 SNGLEIGCAAGAFTEKLAPHCKRLTVID--VMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYYLED 129 (216)
T ss_dssp EEEEEECCTTSHHHHHHGGGEEEEEEEE--SCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSS
T ss_pred CcEEEEcCCCCHHHHHHHHcCCEEEEEE--CCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHhCCC
Confidence 4459999999999999999988888855 534444444433 24789999999988 6889999999999999877
Q ss_pred chhHHHHHHHHHHcccCCcEEEEEeecccc------cchHHHHHHHHHHcCCeEEEEEEeeccCCCCcccceeeEEEEEc
Q 047630 314 TTLLHFLMFDIYRVLRPGGLFWLDHFFCVG------AQLEDVYVPLIESVGFNKLKWVVGRKLDRGPELREMYLSALLEK 387 (392)
Q Consensus 314 ~~~l~~~L~el~RvLKPGG~lii~~~~~~~------~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~~~~~e~ylsai~~K 387 (392)
.+.+..+++++.++|||||++++....... ....+.+..++.+. +..++...... ....+-++..+++|
T Consensus 130 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~----~~~~~d~~l~~~~~ 204 (216)
T 3ofk_A 130 MTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEA-LTEVERVQCQG----QSADEDCLLARFRN 204 (216)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHH-SEEEEEEEEEC----SSTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhh-ccceEEEeccC----CccccchhHHHHhC
Confidence 777778999999999999999997642210 11133344455442 55544322211 12234445588999
Q ss_pred CCC
Q 047630 388 PFL 390 (392)
Q Consensus 388 p~~ 390 (392)
|..
T Consensus 205 ~~~ 207 (216)
T 3ofk_A 205 PER 207 (216)
T ss_dssp CC-
T ss_pred Ccc
Confidence 864
No 47
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.57 E-value=2.6e-14 Score=131.43 Aligned_cols=97 Identities=16% Similarity=0.122 Sum_probs=78.8
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEEcc-cccccCCchh
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHSMH-VLSNWIPTTL 316 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s~~-~l~~~~~~~~ 316 (392)
.|||+|||+|.++..+++.+..++++| ++..+.+.+.++ ..+.++.+|...+++ +++||+|+|.. +++|+.+.++
T Consensus 43 ~vLdiG~G~G~~~~~l~~~~~~v~~~D--~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~ 119 (239)
T 3bxo_A 43 SLLDVACGTGTHLEHFTKEFGDTAGLE--LSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTEE 119 (239)
T ss_dssp EEEEETCTTSHHHHHHHHHHSEEEEEE--SCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHHH
T ss_pred eEEEecccCCHHHHHHHHhCCcEEEEe--CCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHHH
Confidence 349999999999999999888888844 544555544444 247899999998887 78999999755 8888766677
Q ss_pred HHHHHHHHHHcccCCcEEEEEe
Q 047630 317 LHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 317 l~~~L~el~RvLKPGG~lii~~ 338 (392)
...+++++.++|||||.+++..
T Consensus 120 ~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 120 LGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp HHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCeEEEEEe
Confidence 8899999999999999998874
No 48
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.57 E-value=9.6e-15 Score=140.84 Aligned_cols=144 Identities=12% Similarity=0.122 Sum_probs=107.7
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHH-H--cCCEEEEEecCCCchhHHHHHhc----CC---ccEEEeccCcCCCCCCccc
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMM-E--RNITIVTTSMNLNGPFNNFIASR----GV---VPLYISISQRLPFFDNTLD 300 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La-~--~g~~vvg~~iD~~a~~~~~aa~r----g~---i~~~~~d~~~Lpf~d~sFD 300 (392)
+.++.+| ||||||+|.++..++ . .+..++++| ++....+.+.++ +. +.++++|+..++++ ++||
T Consensus 116 l~~~~~v---LDiGcG~G~~~~~la~~~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD 189 (305)
T 3ocj_A 116 LRPGCVV---ASVPCGWMSELLALDYSACPGVQLVGID--YDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYD 189 (305)
T ss_dssp CCTTCEE---EETTCTTCHHHHTSCCTTCTTCEEEEEE--SCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEE
T ss_pred CCCCCEE---EEecCCCCHHHHHHHHhcCCCCeEEEEE--CCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeE
Confidence 3455555 999999999999985 2 366888855 534444433322 22 78899999999987 9999
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccc--------------c---------------------c
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG--------------A---------------------Q 345 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~--------------~---------------------~ 345 (392)
+|++..+++|+.++.....+++++.|+|||||+|++.++.... . .
T Consensus 190 ~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (305)
T 3ocj_A 190 LLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALR 269 (305)
T ss_dssp EEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCC
T ss_pred EEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccC
Confidence 9999999999877777677999999999999999998743210 0 1
Q ss_pred hHHHHHHHHHHcCCeEEEEEEeeccCCCCcccceeeEEEEEcC
Q 047630 346 LEDVYVPLIESVGFNKLKWVVGRKLDRGPELREMYLSALLEKP 388 (392)
Q Consensus 346 l~~~l~~ll~~aGf~~i~w~~~~k~d~~~~~~e~ylsai~~Kp 388 (392)
..+++.++++++||+.++.... ....+..++.+||
T Consensus 270 ~~~~~~~~l~~aGF~~v~~~~~--------~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 270 THAQTRAQLEEAGFTDLRFEDD--------RARLFPTVIARKP 304 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEECC--------TTSSSCEEEEECC
T ss_pred CHHHHHHHHHHCCCEEEEEEcc--------cCceeeEEEEecC
Confidence 2567999999999999987731 2234456788887
No 49
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=2.5e-14 Score=135.75 Aligned_cols=131 Identities=18% Similarity=0.164 Sum_probs=99.9
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEEccc
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHSMHV 307 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s~~~ 307 (392)
+...++.+| ||||||+|.++..+++.+..++++| ++..+.+.+.++ ..+.+.++|+..+++ +++||+|++..+
T Consensus 53 l~~~~~~~v---LDiGcG~G~~~~~l~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~ 126 (279)
T 3ccf_A 53 LNPQPGEFI---LDLGCGTGQLTEKIAQSGAEVLGTD--NAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAM 126 (279)
T ss_dssp HCCCTTCEE---EEETCTTSHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESC
T ss_pred hCCCCCCEE---EEecCCCCHHHHHHHhCCCeEEEEE--CCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcch
Confidence 334444455 9999999999999999888999854 544555555444 247899999999987 689999999999
Q ss_pred ccccCCchhHHHHHHHHHHcccCCcEEEEEeecccc---------------------------cchHHHHHHHHHHcCCe
Q 047630 308 LSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG---------------------------AQLEDVYVPLIESVGFN 360 (392)
Q Consensus 308 l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~---------------------------~~l~~~l~~ll~~aGf~ 360 (392)
++++. +...+++++.|+|||||++++....... -...+.+.++++++||+
T Consensus 127 l~~~~---d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 203 (279)
T 3ccf_A 127 LHWVK---EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFD 203 (279)
T ss_dssp GGGCS---CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEE
T ss_pred hhhCc---CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCE
Confidence 99873 4457999999999999999987653211 00145688999999999
Q ss_pred EEEEEEee
Q 047630 361 KLKWVVGR 368 (392)
Q Consensus 361 ~i~w~~~~ 368 (392)
.+.+....
T Consensus 204 ~~~~~~~~ 211 (279)
T 3ccf_A 204 VTYAALFN 211 (279)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 98876443
No 50
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.57 E-value=2.8e-14 Score=133.11 Aligned_cols=121 Identities=14% Similarity=0.206 Sum_probs=93.7
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc-----CCccEEEeccCcCCCCCCcccEEEEcccccccCC
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR-----GVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIP 313 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-----g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~ 313 (392)
.|||+|||+|.++..+++.+..++++| ++..+.+.+.++ ..+.+.++|...+++++++||+|++..+++++.
T Consensus 42 ~vLDiG~G~G~~~~~l~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 118 (263)
T 2yqz_A 42 VFLELGVGTGRIALPLIARGYRYIALD--ADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLVP- 118 (263)
T ss_dssp EEEEETCTTSTTHHHHHTTTCEEEEEE--SCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGCT-
T ss_pred EEEEeCCcCCHHHHHHHHCCCEEEEEE--CCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhhcC-
Confidence 349999999999999999998998855 544555544443 247889999999999999999999999998873
Q ss_pred chhHHHHHHHHHHcccCCcEEEEEeeccc--cc-------------------------chHHHHHHHHHHcCCeEEEEE
Q 047630 314 TTLLHFLMFDIYRVLRPGGLFWLDHFFCV--GA-------------------------QLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 314 ~~~l~~~L~el~RvLKPGG~lii~~~~~~--~~-------------------------~l~~~l~~ll~~aGf~~i~w~ 365 (392)
+...+++++.|+|||||.+++. +... .. ...+.+.++++++||+.+.+.
T Consensus 119 --~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 194 (263)
T 2yqz_A 119 --DWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTRE 194 (263)
T ss_dssp --THHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred --CHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcceEE
Confidence 4567999999999999999887 2211 00 014557788999999877654
No 51
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.57 E-value=1e-14 Score=137.89 Aligned_cols=149 Identities=11% Similarity=0.088 Sum_probs=100.2
Q ss_pred EEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhc-----------------------------------CCc
Q 047630 239 IGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASR-----------------------------------GVV 282 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~r-----------------------------------g~i 282 (392)
+|||||||+|.++..++..+. .|+|+| ++..+.+.+.++ ..+
T Consensus 58 ~vLDiGCG~G~~~~~~~~~~~~~v~g~D--~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (263)
T 2a14_A 58 TLIDIGSGPTIYQVLAACDSFQDITLSD--FTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAV 135 (263)
T ss_dssp EEEESSCTTCCGGGTTGGGTEEEEEEEE--SCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHE
T ss_pred eEEEeCCCccHHHHHHHHhhhcceeecc--ccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhh
Confidence 459999999999888888776 588855 533333322211 002
Q ss_pred c-EEEeccCc-CCC---CCCcccEEEEcccccccC-CchhHHHHHHHHHHcccCCcEEEEEeecccc-----c-------
Q 047630 283 P-LYISISQR-LPF---FDNTLDIVHSMHVLSNWI-PTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG-----A------- 344 (392)
Q Consensus 283 ~-~~~~d~~~-Lpf---~d~sFDlV~s~~~l~~~~-~~~~l~~~L~el~RvLKPGG~lii~~~~~~~-----~------- 344 (392)
. ++++|+.. .|+ ..++||+|++++++|+.. +.++...++++++|+|||||+|++....... .
T Consensus 136 ~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~ 215 (263)
T 2a14_A 136 KRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVA 215 (263)
T ss_dssp EEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCC
T ss_pred heEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccc
Confidence 2 77888776 344 367999999999998853 3466778999999999999999998643221 0
Q ss_pred chHHHHHHHHHHcCCeEEEEEEeec-cCCCCcccceeeEEEEEcCC
Q 047630 345 QLEDVYVPLIESVGFNKLKWVVGRK-LDRGPELREMYLSALLEKPF 389 (392)
Q Consensus 345 ~l~~~l~~ll~~aGf~~i~w~~~~k-~d~~~~~~e~ylsai~~Kp~ 389 (392)
-..+++.++++++||+.+.+..... ........+.++.++.+|+.
T Consensus 216 ~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~~ 261 (263)
T 2a14_A 216 LEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKKP 261 (263)
T ss_dssp CCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEECC
T ss_pred cCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEecC
Confidence 0256799999999999998876532 11111111223346888874
No 52
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.57 E-value=6.3e-14 Score=128.32 Aligned_cols=132 Identities=19% Similarity=0.276 Sum_probs=101.4
Q ss_pred HHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEE
Q 047630 224 SIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVH 303 (392)
Q Consensus 224 lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~ 303 (392)
.++.+..+.++.+| ||+|||+|.++..+++. ++ +|++....+.+.+++ +.++.++...+++++++||+|+
T Consensus 38 ~~~~l~~~~~~~~v---LDiG~G~G~~~~~l~~~----~~--vD~s~~~~~~a~~~~-~~~~~~d~~~~~~~~~~fD~v~ 107 (219)
T 1vlm_A 38 ELQAVKCLLPEGRG---VEIGVGTGRFAVPLKIK----IG--VEPSERMAEIARKRG-VFVLKGTAENLPLKDESFDFAL 107 (219)
T ss_dssp HHHHHHHHCCSSCE---EEETCTTSTTHHHHTCC----EE--EESCHHHHHHHHHTT-CEEEECBTTBCCSCTTCEEEEE
T ss_pred HHHHHHHhCCCCcE---EEeCCCCCHHHHHHHHH----hc--cCCCHHHHHHHHhcC-CEEEEcccccCCCCCCCeeEEE
Confidence 33444445555555 99999999999999876 55 566455555665554 7899999999999889999999
Q ss_pred EcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc--------------------chHHHHHHHHHHcCCeEEE
Q 047630 304 SMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA--------------------QLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 304 s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~--------------------~l~~~l~~ll~~aGf~~i~ 363 (392)
+..+++++ .+...+++++.++|||||.+++........ -..+++.++++++||+.++
T Consensus 108 ~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~ 184 (219)
T 1vlm_A 108 MVTTICFV---DDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFK 184 (219)
T ss_dssp EESCGGGS---SCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred EcchHhhc---cCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEE
Confidence 99999987 334579999999999999999986532110 1256799999999999988
Q ss_pred EEEee
Q 047630 364 WVVGR 368 (392)
Q Consensus 364 w~~~~ 368 (392)
.....
T Consensus 185 ~~~~~ 189 (219)
T 1vlm_A 185 VVQTL 189 (219)
T ss_dssp EEEEC
T ss_pred Eeccc
Confidence 77553
No 53
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.56 E-value=5.1e-14 Score=126.68 Aligned_cols=146 Identities=15% Similarity=0.102 Sum_probs=103.3
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----C-CccEEEeccCcCCCCCCcccEEEEcccccccCC
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----G-VVPLYISISQRLPFFDNTLDIVHSMHVLSNWIP 313 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g-~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~ 313 (392)
.|||+|||+|.++..+++.+..+++ +|++....+.+.++ + .+.+..+|+..+++++++||+|++.. .++ .
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~--vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~-~ 106 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTA--VDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHL-P 106 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEE--ECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCC-C
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEE--EECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcC-C
Confidence 3499999999999999999999988 55544444433322 2 36788899999998889999999964 343 4
Q ss_pred chhHHHHHHHHHHcccCCcEEEEEeeccccc-------------chHHHHHHHHHHcCCeEEEEEEeeccCC-CC--ccc
Q 047630 314 TTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA-------------QLEDVYVPLIESVGFNKLKWVVGRKLDR-GP--ELR 377 (392)
Q Consensus 314 ~~~l~~~L~el~RvLKPGG~lii~~~~~~~~-------------~l~~~l~~ll~~aGf~~i~w~~~~k~d~-~~--~~~ 377 (392)
......+++++.++|||||++++..+..... -..+++.++++ ||+++.......... +. ...
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~~~~~~~g~~~~~~ 184 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNLERNLDEGAYHQGK 184 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEEEEECSCSSSSCCE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEEEeecCCCCCcccH
Confidence 5667889999999999999999997643211 11667888888 999998776654321 11 122
Q ss_pred ceeeEEEEEcCCCC
Q 047630 378 EMYLSALLEKPFLD 391 (392)
Q Consensus 378 e~ylsai~~Kp~~~ 391 (392)
..++....+|+..+
T Consensus 185 ~~~i~~~~~~~~~~ 198 (202)
T 2kw5_A 185 AALIQLLGQKLEHH 198 (202)
T ss_dssp EEEEEEEECCCSSC
T ss_pred HHHHHHHHHhhhhc
Confidence 34445555665543
No 54
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.56 E-value=8.1e-14 Score=127.12 Aligned_cols=142 Identities=18% Similarity=0.184 Sum_probs=101.9
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc-----CCccEEEeccCcCCCC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR-----GVVPLYISISQRLPFF 295 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-----g~i~~~~~d~~~Lpf~ 295 (392)
.+.+++.+....+. -.+|||+|||+|.++..+++.+..++++|++ ....+.+.++ ..+.++++|...++++
T Consensus 25 ~~~~~~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 100 (227)
T 1ve3_A 25 IETLEPLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGFEVVGVDIS--EDMIRKAREYAKSRESNVEFIVGDARKLSFE 100 (227)
T ss_dssp HHHHHHHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCCEEEECCTTSCCSC
T ss_pred HHHHHHHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHhcCCCceEEECchhcCCCC
Confidence 34455555543322 2344999999999999999998888885543 3444433322 3478999999999888
Q ss_pred CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc------------------c---c---------c
Q 047630 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV------------------G---A---------Q 345 (392)
Q Consensus 296 d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~------------------~---~---------~ 345 (392)
+++||+|++..++++ ....+...+++++.++|||||.+++.+.... . . +
T Consensus 101 ~~~~D~v~~~~~~~~-~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (227)
T 1ve3_A 101 DKTFDYVIFIDSIVH-FEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIE 179 (227)
T ss_dssp TTCEEEEEEESCGGG-CCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEE
T ss_pred CCcEEEEEEcCchHh-CCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEE
Confidence 899999999998544 2335667899999999999999988754200 0 0 0
Q ss_pred --------------hHHHHHHHHHHcCCeEEEEEEe
Q 047630 346 --------------LEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 346 --------------l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
...++.++++++||+.++....
T Consensus 180 ~~~~~~~~~~~~~~w~~~~~~~l~~~GF~~v~~~~~ 215 (227)
T 1ve3_A 180 FKSEQDSFRVRFNVWGKTGVELLAKLYFTKEAEEKV 215 (227)
T ss_dssp C-----CCEEEEECCCHHHHHHHHTTTEEEEEEEEE
T ss_pred eccchhhheeehhhhchHHHHHHHHHhhhHHHHHHh
Confidence 0156899999999999988743
No 55
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.55 E-value=1.3e-14 Score=138.45 Aligned_cols=137 Identities=12% Similarity=0.134 Sum_probs=98.3
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHHhc----C-CccEEEeccCcCC
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIASR----G-VVPLYISISQRLP 293 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~r----g-~i~~~~~d~~~Lp 293 (392)
+.+++.+..+.++.+| ||||||+|.++..+++. +..++++| ++....+.+.++ + .+.+.++|+..++
T Consensus 11 ~~~~~~~~~~~~~~~v---LDiGcG~G~~~~~l~~~~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 85 (284)
T 3gu3_A 11 SFLVNTVWKITKPVHI---VDYGCGYGYLGLVLMPLLPEGSKYTGID--SGETLLAEARELFRLLPYDSEFLEGDATEIE 85 (284)
T ss_dssp HHHHHTTSCCCSCCEE---EEETCTTTHHHHHHTTTSCTTCEEEEEE--SCHHHHHHHHHHHHSSSSEEEEEESCTTTCC
T ss_pred HHHHHHHhccCCCCeE---EEecCCCCHHHHHHHHhCCCCCEEEEEE--CCHHHHHHHHHHHHhcCCceEEEEcchhhcC
Confidence 3444444444444455 99999999999999986 57888855 433444433322 2 3788999999998
Q ss_pred CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec---------cccc--------------------
Q 047630 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF---------CVGA-------------------- 344 (392)
Q Consensus 294 f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~---------~~~~-------------------- 344 (392)
+ +++||+|++..+++++. +...++++++|+|||||++++.+.. ....
T Consensus 86 ~-~~~fD~v~~~~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (284)
T 3gu3_A 86 L-NDKYDIAICHAFLLHMT---TPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQ 161 (284)
T ss_dssp C-SSCEEEEEEESCGGGCS---SHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHH
T ss_pred c-CCCeeEEEECChhhcCC---CHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhh
Confidence 8 46999999999999973 3457999999999999999887643 0000
Q ss_pred ------chHHHHHHHHHHcCCeEEEEEEe
Q 047630 345 ------QLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 345 ------~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
.....+.++++++||+.+.....
T Consensus 162 ~~~~~~~~~~~l~~~l~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 162 RNGKDGNIGMKIPIYLSELGVKNIECRVS 190 (284)
T ss_dssp HTCCCTTGGGTHHHHHHHTTCEEEEEEEC
T ss_pred hhcccccHHHHHHHHHHHcCCCeEEEEEc
Confidence 01234678999999999987543
No 56
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.55 E-value=5.3e-14 Score=131.37 Aligned_cols=151 Identities=13% Similarity=0.114 Sum_probs=103.9
Q ss_pred cEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhc---CC--------------------------------
Q 047630 238 RIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASR---GV-------------------------------- 281 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~r---g~-------------------------------- 281 (392)
..|||+|||+|.++..+++.+. .++++| ++..+.+.+.++ ..
T Consensus 58 ~~vLDlGcG~G~~~~~l~~~~~~~v~gvD--~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (265)
T 2i62_A 58 ELLIDIGSGPTIYQLLSACESFTEIIVSD--YTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA 135 (265)
T ss_dssp EEEEEESCTTCCGGGTTGGGTEEEEEEEE--SCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred CEEEEECCCccHHHHHHhhcccCeEEEec--CCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhh
Confidence 4459999999999999999887 788855 534444433221 11
Q ss_pred c-cEEEeccCcCC-CCC---CcccEEEEcccccccCCc-hhHHHHHHHHHHcccCCcEEEEEeecccc------------
Q 047630 282 V-PLYISISQRLP-FFD---NTLDIVHSMHVLSNWIPT-TLLHFLMFDIYRVLRPGGLFWLDHFFCVG------------ 343 (392)
Q Consensus 282 i-~~~~~d~~~Lp-f~d---~sFDlV~s~~~l~~~~~~-~~l~~~L~el~RvLKPGG~lii~~~~~~~------------ 343 (392)
+ .+.++|+...+ +++ ++||+|++..+++++.+. .....+++++.|+|||||+|++.......
T Consensus 136 v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~ 215 (265)
T 2i62_A 136 IKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSL 215 (265)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred heeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccccc
Confidence 5 77888887764 355 899999999999854322 46678999999999999999988643210
Q ss_pred cchHHHHHHHHHHcCCeEEEEEEeec-cCCCCcccceeeEEEEEcCCC
Q 047630 344 AQLEDVYVPLIESVGFNKLKWVVGRK-LDRGPELREMYLSALLEKPFL 390 (392)
Q Consensus 344 ~~l~~~l~~ll~~aGf~~i~w~~~~k-~d~~~~~~e~ylsai~~Kp~~ 390 (392)
.-..+++.++++++||+.+.+..... .+.........+..+.+|+..
T Consensus 216 ~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~ 263 (265)
T 2i62_A 216 PLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKPGR 263 (265)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECCC-
T ss_pred ccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccccc
Confidence 01255799999999999999886652 111111112233468888754
No 57
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.55 E-value=4.6e-14 Score=128.73 Aligned_cols=131 Identities=11% Similarity=0.067 Sum_probs=94.8
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhHHHHHhc----C-------CccEEEeccCcCCCC
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFNNFIASR----G-------VVPLYISISQRLPFF 295 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~~~aa~r----g-------~i~~~~~d~~~Lpf~ 295 (392)
+...++.+| ||||||+|.++..+++.+ ..++++| ++....+.+.++ + .+.++++|+...++.
T Consensus 25 l~~~~~~~v---LDiGcG~G~~~~~l~~~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 99 (217)
T 3jwh_A 25 LKQSNARRV---IDLGCGQGNLLKILLKDSFFEQITGVD--VSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKR 99 (217)
T ss_dssp HHHTTCCEE---EEETCTTCHHHHHHHHCTTCSEEEEEE--SCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGG
T ss_pred HHhcCCCEE---EEeCCCCCHHHHHHHhhCCCCEEEEEE--CCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccccc
Confidence 334444555 999999999999999976 5788855 534444443332 1 478889998888888
Q ss_pred CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc----------------------cccchHHHHHHH
Q 047630 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC----------------------VGAQLEDVYVPL 353 (392)
Q Consensus 296 d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~----------------------~~~~l~~~l~~l 353 (392)
+++||+|++..+++|+ ++..+..+++++.|+|||||++++..... ..+++.+.+.++
T Consensus 100 ~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 178 (217)
T 3jwh_A 100 FHGYDAATVIEVIEHL-DLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKI 178 (217)
T ss_dssp GCSCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHH
T ss_pred CCCcCEEeeHHHHHcC-CHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHH
Confidence 8899999999999986 55566789999999999999887765321 111123333388
Q ss_pred HHHcCCeEEEEE
Q 047630 354 IESVGFNKLKWV 365 (392)
Q Consensus 354 l~~aGf~~i~w~ 365 (392)
++++||++....
T Consensus 179 ~~~~Gf~v~~~~ 190 (217)
T 3jwh_A 179 TERFAYNVQFQP 190 (217)
T ss_dssp HHHSSEEEEECC
T ss_pred HHHcCceEEEEe
Confidence 999999875543
No 58
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.54 E-value=7.5e-14 Score=132.79 Aligned_cols=157 Identities=13% Similarity=0.136 Sum_probs=107.3
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHH----HhcC-CccEEEeccCcCCCCC
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFI----ASRG-VVPLYISISQRLPFFD 296 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~a----a~rg-~i~~~~~d~~~Lpf~d 296 (392)
..+++. +...++.+| ||+|||+|.++..+++.+..++++|++ ....+.+ ...+ .+.++++|+..+++ +
T Consensus 110 ~~~~~~-~~~~~~~~v---LD~GcG~G~~~~~l~~~g~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~ 182 (286)
T 3m70_A 110 GDVVDA-AKIISPCKV---LDLGCGQGRNSLYLSLLGYDVTSWDHN--ENSIAFLNETKEKENLNISTALYDINAANI-Q 182 (286)
T ss_dssp HHHHHH-HHHSCSCEE---EEESCTTCHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEEECCGGGCCC-C
T ss_pred HHHHHH-hhccCCCcE---EEECCCCCHHHHHHHHCCCeEEEEECC--HHHHHHHHHHHHHcCCceEEEEeccccccc-c
Confidence 334433 334455666 999999999999999999999995544 3444322 2233 47888999998887 8
Q ss_pred CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc----------chHHHHHHHHHHcCCeEEEEEE
Q 047630 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA----------QLEDVYVPLIESVGFNKLKWVV 366 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~----------~l~~~l~~ll~~aGf~~i~w~~ 366 (392)
++||+|++..+++|+ ++..+..+++++.++|||||++++........ -..+++.+++.. |+.+.+..
T Consensus 183 ~~fD~i~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~ 259 (286)
T 3m70_A 183 ENYDFIVSTVVFMFL-NRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYNE 259 (286)
T ss_dssp SCEEEEEECSSGGGS-CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEEC
T ss_pred CCccEEEEccchhhC-CHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEEc
Confidence 899999999999885 66667789999999999999987765433211 014456666655 88888753
Q ss_pred ee----ccCC-CCcccceeeEEEEEcC
Q 047630 367 GR----KLDR-GPELREMYLSALLEKP 388 (392)
Q Consensus 367 ~~----k~d~-~~~~~e~ylsai~~Kp 388 (392)
.. +.+. +....-.+...+.+||
T Consensus 260 ~~~~~~~~~~~g~~~~~~~~~l~arK~ 286 (286)
T 3m70_A 260 NMGELHKTDENGNRIKMKFATMLARKK 286 (286)
T ss_dssp CEEEEEEECSSCCEEEEEEEEEEEECC
T ss_pred cCCeeeeccCCCCEEEEEEEEEEEecC
Confidence 21 2221 2222223556788887
No 59
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.54 E-value=2.5e-14 Score=135.11 Aligned_cols=128 Identities=19% Similarity=0.242 Sum_probs=96.2
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh----cC--CccEEEeccCcCCCCCCcccEEE
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRLPFFDNTLDIVH 303 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~Lpf~d~sFDlV~ 303 (392)
.++.+| ||||||+|.++..+++. +..++++| ++....+.+.+ .+ .+.+..+|...+++++++||+|+
T Consensus 36 ~~~~~v---LDiG~G~G~~~~~l~~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 110 (276)
T 3mgg_A 36 PPGAKV---LEAGCGIGAQTVILAKNNPDAEITSID--ISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIF 110 (276)
T ss_dssp CTTCEE---EETTCTTSHHHHHHHHHCTTSEEEEEE--SCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEE
T ss_pred CCCCeE---EEecCCCCHHHHHHHHhCCCCEEEEEE--CCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEE
Confidence 344455 99999999999999997 67888855 53444443332 23 37889999999999999999999
Q ss_pred EcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc------c-c--------------------chHHHHHHHHHH
Q 047630 304 SMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV------G-A--------------------QLEDVYVPLIES 356 (392)
Q Consensus 304 s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~------~-~--------------------~l~~~l~~ll~~ 356 (392)
+..+++++.+ ...+++++.|+|||||++++.+.... . . .....+.+++++
T Consensus 111 ~~~~l~~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 187 (276)
T 3mgg_A 111 VCFVLEHLQS---PEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQE 187 (276)
T ss_dssp EESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHH
T ss_pred EechhhhcCC---HHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHH
Confidence 9999999744 34699999999999999998763210 0 0 012457789999
Q ss_pred cCCeEEEEEEe
Q 047630 357 VGFNKLKWVVG 367 (392)
Q Consensus 357 aGf~~i~w~~~ 367 (392)
+||+.++....
T Consensus 188 aGf~~v~~~~~ 198 (276)
T 3mgg_A 188 SGFEKIRVEPR 198 (276)
T ss_dssp TTCEEEEEEEE
T ss_pred CCCCeEEEeeE
Confidence 99999887744
No 60
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.54 E-value=3.5e-14 Score=141.72 Aligned_cols=124 Identities=19% Similarity=0.196 Sum_probs=96.2
Q ss_pred EEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHHhc--------------CCccEEEeccCcC------CCCC
Q 047630 240 GLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIASR--------------GVVPLYISISQRL------PFFD 296 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~r--------------g~i~~~~~d~~~L------pf~d 296 (392)
|||||||+|.++..+++. +..++++| ++..+.+.+.++ ..+.++++|+..+ ++++
T Consensus 87 VLDlGcG~G~~~~~la~~~~~~~~v~gvD--~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~ 164 (383)
T 4fsd_A 87 VLDLGCGTGRDVYLASKLVGEHGKVIGVD--MLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPD 164 (383)
T ss_dssp EEEESCTTSHHHHHHHHHHTTTCEEEEEE--CCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCT
T ss_pred EEEecCccCHHHHHHHHHhCCCCEEEEEE--CCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCCC
Confidence 499999999999999884 55888855 544444444432 2478999999887 8999
Q ss_pred CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc-------------------chHHHHHHHHHHc
Q 047630 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA-------------------QLEDVYVPLIESV 357 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~-------------------~l~~~l~~ll~~a 357 (392)
++||+|++..+++++. +...++++++|+|||||+|++.++..... -..+++.++++++
T Consensus 165 ~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 241 (383)
T 4fsd_A 165 SSVDIVISNCVCNLST---NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEA 241 (383)
T ss_dssp TCEEEEEEESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHT
T ss_pred CCEEEEEEccchhcCC---CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHC
Confidence 9999999999999873 34579999999999999999987644321 1136799999999
Q ss_pred CCeEEEEEEee
Q 047630 358 GFNKLKWVVGR 368 (392)
Q Consensus 358 Gf~~i~w~~~~ 368 (392)
||+.+++....
T Consensus 242 GF~~v~~~~~~ 252 (383)
T 4fsd_A 242 GFRDVRLVSVG 252 (383)
T ss_dssp TCCCEEEEEEE
T ss_pred CCceEEEEecc
Confidence 99988766544
No 61
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.54 E-value=1.2e-13 Score=132.74 Aligned_cols=124 Identities=11% Similarity=0.105 Sum_probs=96.1
Q ss_pred EEEEEcCCcchHHHHHHHc-CCEEEEEecCCCchhHHHHHh----cC---CccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMMER-NITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
.|||||||+|.++..+++. +..++++| ++....+.+.+ .+ .+.+..+|...+ +++||+|++..+++|
T Consensus 75 ~vLDiGcG~G~~~~~la~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~ 149 (302)
T 3hem_A 75 TLLDIGCGWGSTMRHAVAEYDVNVIGLT--LSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEH 149 (302)
T ss_dssp EEEEETCTTSHHHHHHHHHHCCEEEEEE--CCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGGG
T ss_pred EEEEeeccCcHHHHHHHHhCCCEEEEEE--CCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHHh
Confidence 3499999999999999997 88888855 53444443332 23 367889998876 789999999999999
Q ss_pred cCCc------hhHHHHHHHHHHcccCCcEEEEEeecccccc-------------------------------hHHHHHHH
Q 047630 311 WIPT------TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQ-------------------------------LEDVYVPL 353 (392)
Q Consensus 311 ~~~~------~~l~~~L~el~RvLKPGG~lii~~~~~~~~~-------------------------------l~~~l~~l 353 (392)
+.++ .....+++++.|+|||||++++..+...... ..+++.++
T Consensus 150 ~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~ 229 (302)
T 3hem_A 150 FADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYY 229 (302)
T ss_dssp TTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHH
T ss_pred cCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHHH
Confidence 7554 5667899999999999999999886432211 14568899
Q ss_pred HHHcCCeEEEEEEe
Q 047630 354 IESVGFNKLKWVVG 367 (392)
Q Consensus 354 l~~aGf~~i~w~~~ 367 (392)
++++||+.+.+...
T Consensus 230 l~~aGf~~~~~~~~ 243 (302)
T 3hem_A 230 SSNAGWKVERYHRI 243 (302)
T ss_dssp HHHHTCEEEEEEEC
T ss_pred HHhCCcEEEEEEeC
Confidence 99999999988743
No 62
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.53 E-value=9.5e-14 Score=134.20 Aligned_cols=123 Identities=14% Similarity=0.150 Sum_probs=94.9
Q ss_pred EEEEEcCCcchHHHHHHHc-CCEEEEEecCCCchhHHHHHhc----C---CccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMMER-NITIVTTSMNLNGPFNNFIASR----G---VVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-g~~vvg~~iD~~a~~~~~aa~r----g---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
.|||||||+|.++..+++. +..++++| ++....+.+.++ + .+.+..+|...+| ++||+|++..+++|
T Consensus 93 ~vLDiGcG~G~~~~~la~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~ 167 (318)
T 2fk8_A 93 TLLDIGCGWGTTMRRAVERFDVNVIGLT--LSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEH 167 (318)
T ss_dssp EEEEESCTTSHHHHHHHHHHCCEEEEEE--SCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGGG
T ss_pred EEEEEcccchHHHHHHHHHCCCEEEEEE--CCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHHh
Confidence 3499999999999999987 88998855 434444433332 3 3678888988775 78999999999988
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEeecccccc-------------------------------hHHHHHHHHHHcCC
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQ-------------------------------LEDVYVPLIESVGF 359 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~-------------------------------l~~~l~~ll~~aGf 359 (392)
+ +..+...+++++.|+|||||++++.++...... ..+++.++++++||
T Consensus 168 ~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf 246 (318)
T 2fk8_A 168 F-GHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGF 246 (318)
T ss_dssp T-CGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTC
T ss_pred c-CHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCC
Confidence 5 445667899999999999999999876432210 15678899999999
Q ss_pred eEEEEEEe
Q 047630 360 NKLKWVVG 367 (392)
Q Consensus 360 ~~i~w~~~ 367 (392)
+.+.+...
T Consensus 247 ~~~~~~~~ 254 (318)
T 2fk8_A 247 TVPEPLSL 254 (318)
T ss_dssp BCCCCEEC
T ss_pred EEEEEEec
Confidence 99887653
No 63
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.52 E-value=8.8e-14 Score=126.56 Aligned_cols=124 Identities=10% Similarity=0.058 Sum_probs=95.5
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCc--CCCCCCcccEEEEcccccccCCchh
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQR--LPFFDNTLDIVHSMHVLSNWIPTTL 316 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~--Lpf~d~sFDlV~s~~~l~~~~~~~~ 316 (392)
.|||+|||+|.++..+++.+..++++ |++....+.+.++ ...+..+|+.. +++++++||+|++..+++|+.+
T Consensus 35 ~vLdiG~G~G~~~~~l~~~~~~~~~~--D~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~--- 108 (230)
T 3cc8_A 35 EVLDIGCSSGALGAAIKENGTRVSGI--EAFPEAAEQAKEK-LDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFD--- 108 (230)
T ss_dssp EEEEETCTTSHHHHHHHTTTCEEEEE--ESSHHHHHHHHTT-SSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSC---
T ss_pred cEEEeCCCCCHHHHHHHhcCCeEEEE--eCCHHHHHHHHHh-CCcEEEcchhhcCCCCCCCccCEEEECChhhhcCC---
Confidence 44999999999999999988888884 4534444444444 35788888876 6778899999999999999743
Q ss_pred HHHHHHHHHHcccCCcEEEEEeecccc--------------------------cchHHHHHHHHHHcCCeEEEEEEee
Q 047630 317 LHFLMFDIYRVLRPGGLFWLDHFFCVG--------------------------AQLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 317 l~~~L~el~RvLKPGG~lii~~~~~~~--------------------------~~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
...+++++.++|||||++++....... .-..+++.++++++||+.+......
T Consensus 109 ~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 109 PWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDRVY 186 (230)
T ss_dssp HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEecc
Confidence 347999999999999999987632100 0126679999999999999887654
No 64
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.51 E-value=2.5e-14 Score=137.55 Aligned_cols=127 Identities=18% Similarity=0.206 Sum_probs=91.6
Q ss_pred EEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc-------------------------------------
Q 047630 239 IGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR------------------------------------- 279 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r------------------------------------- 279 (392)
.|||||||+|.++..+++. +..++|+|+| ..+.+.+.++
T Consensus 49 ~VLDiGCG~G~~~~~la~~~~~~~v~gvDis--~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 49 DVLDLGCNVGHLTLSIACKWGPSRMVGLDID--SRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp EEEEESCTTCHHHHHHHHHTCCSEEEEEESC--HHHHHHHHHTC------------------------------------
T ss_pred cEEEeCCCCCHHHHHHHHHcCCCEEEEECCC--HHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 3499999999999999996 6788885544 4444433332
Q ss_pred ---------------------------CCccEEEeccCcCC-----CCCCcccEEEEcccccccC---CchhHHHHHHHH
Q 047630 280 ---------------------------GVVPLYISISQRLP-----FFDNTLDIVHSMHVLSNWI---PTTLLHFLMFDI 324 (392)
Q Consensus 280 ---------------------------g~i~~~~~d~~~Lp-----f~d~sFDlV~s~~~l~~~~---~~~~l~~~L~el 324 (392)
..+.+.++|....+ +.+++||+|+|..++++++ .++.+..+++++
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~ 206 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRI 206 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHH
Confidence 23677788766543 5788999999999986653 556778999999
Q ss_pred HHcccCCcEEEEEeecc----c----ccch----------HHHHHHHHHH--cCCeEEEEEEe
Q 047630 325 YRVLRPGGLFWLDHFFC----V----GAQL----------EDVYVPLIES--VGFNKLKWVVG 367 (392)
Q Consensus 325 ~RvLKPGG~lii~~~~~----~----~~~l----------~~~l~~ll~~--aGf~~i~w~~~ 367 (392)
+++|||||+|++..... . .+.. ++.+.+++.+ +||+.++....
T Consensus 207 ~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 207 YRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 99999999999974211 0 0000 4557888888 99988876543
No 65
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=1.3e-13 Score=128.51 Aligned_cols=120 Identities=13% Similarity=0.065 Sum_probs=93.2
Q ss_pred EEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEEcccccccCCchh
Q 047630 240 GLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTL 316 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~ 316 (392)
|||||||+|.++..+++. +..++++| ++..+.+.+.++ ..+.+.++|.+.++ ++++||+|++..+++++ .+
T Consensus 37 vLdiG~G~G~~~~~l~~~~~~~~v~~~D--~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~---~~ 110 (259)
T 2p35_A 37 GYDLGCGPGNSTELLTDRYGVNVITGID--SDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWV---PD 110 (259)
T ss_dssp EEEETCTTTHHHHHHHHHHCTTSEEEEE--SCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGS---TT
T ss_pred EEEecCcCCHHHHHHHHhCCCCEEEEEE--CCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhC---CC
Confidence 499999999999999987 78898855 544555555444 24789999999988 78899999999999987 34
Q ss_pred HHHHHHHHHHcccCCcEEEEEeecccc--------------------c---------chHHHHHHHHHHcCCeEEEEE
Q 047630 317 LHFLMFDIYRVLRPGGLFWLDHFFCVG--------------------A---------QLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 317 l~~~L~el~RvLKPGG~lii~~~~~~~--------------------~---------~l~~~l~~ll~~aGf~~i~w~ 365 (392)
...+++++.|+|||||++++....... . ...+.+.++++++||++..+.
T Consensus 111 ~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 188 (259)
T 2p35_A 111 HLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKSSRVDVWH 188 (259)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcCCceEEEE
Confidence 567999999999999999987642110 0 115668999999999765554
No 66
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.51 E-value=4.4e-13 Score=124.66 Aligned_cols=96 Identities=21% Similarity=0.292 Sum_probs=75.0
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cC-CccEEEeccCcCCCCCCcccEEEEcccccccCC
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RG-VVPLYISISQRLPFFDNTLDIVHSMHVLSNWIP 313 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg-~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~ 313 (392)
.|||+|||+|.++..+++.+..++++| ++..+.+.+.+ .+ .+.++++|...++++ ++||+|++.....+..+
T Consensus 44 ~vLDlGcG~G~~~~~l~~~~~~v~gvD--~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~ 120 (252)
T 1wzn_A 44 RVLDLACGTGIPTLELAERGYEVVGLD--LHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFD 120 (252)
T ss_dssp EEEEETCTTCHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSC
T ss_pred EEEEeCCCCCHHHHHHHHCCCeEEEEE--CCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcCC
Confidence 459999999999999999999999855 43444443322 23 378899999888865 68999999865444456
Q ss_pred chhHHHHHHHHHHcccCCcEEEEE
Q 047630 314 TTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 314 ~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
.+....+++++.++|||||.++++
T Consensus 121 ~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 121 EEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEe
Confidence 667789999999999999999865
No 67
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.50 E-value=1.5e-13 Score=131.12 Aligned_cols=128 Identities=16% Similarity=0.118 Sum_probs=89.6
Q ss_pred EEEEEcCCcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhc---------------------C---------------C
Q 047630 239 IGLDIGGGVATFAVRMME-RNITIVTTSMNLNGPFNNFIASR---------------------G---------------V 281 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~r---------------------g---------------~ 281 (392)
.|||||||+|.++..++. .+..|+| +|++..+.+.+.++ + .
T Consensus 74 ~vLDiGcG~G~~~~l~~~~~~~~v~g--vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 151 (289)
T 2g72_A 74 TLIDIGSGPTVYQLLSACSHFEDITM--TDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARV 151 (289)
T ss_dssp EEEEETCTTCCGGGTTGGGGCSEEEE--ECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHE
T ss_pred eEEEECCCcChHHHHhhccCCCeEEE--eCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhh
Confidence 349999999996554444 4678888 55544444433321 1 0
Q ss_pred ccEEEeccCc-CCC-----CCCcccEEEEcccccccCCc-hhHHHHHHHHHHcccCCcEEEEEeecccc-----------
Q 047630 282 VPLYISISQR-LPF-----FDNTLDIVHSMHVLSNWIPT-TLLHFLMFDIYRVLRPGGLFWLDHFFCVG----------- 343 (392)
Q Consensus 282 i~~~~~d~~~-Lpf-----~d~sFDlV~s~~~l~~~~~~-~~l~~~L~el~RvLKPGG~lii~~~~~~~----------- 343 (392)
+.++.+|+.. +|+ ++++||+|+++++++++.+. .+...+|++++|+|||||+|++.......
T Consensus 152 ~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~ 231 (289)
T 2g72_A 152 KRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTV 231 (289)
T ss_dssp EEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEEC
T ss_pred ceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeee
Confidence 2355567776 664 45679999999999884332 46788999999999999999887532110
Q ss_pred -cchHHHHHHHHHHcCCeEEEEEEee
Q 047630 344 -AQLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 344 -~~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
.-..+++.++++++||+.+.+....
T Consensus 232 ~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 232 VPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp CCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 0126679999999999999988665
No 68
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.50 E-value=1.5e-13 Score=130.47 Aligned_cols=131 Identities=18% Similarity=0.103 Sum_probs=98.5
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhc----C---CccEEEeccCcCCC-CCCcccEE
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASR----G---VVPLYISISQRLPF-FDNTLDIV 302 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~r----g---~i~~~~~d~~~Lpf-~d~sFDlV 302 (392)
.++.+| ||||||+|.++..+++.+. .++++| ++....+.+.++ + .+.++++|+..+++ .+++||+|
T Consensus 63 ~~~~~v---LDiGcG~G~~~~~l~~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSV---LDLGCGKGGDLLKYERAGIGEYYGVD--IAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CTTCEE---EEETCTTTTTHHHHHHHTCSEEEEEE--SCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCeE---EEECCCCCHHHHHHHHCCCCEEEEEE--CCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEE
Confidence 444555 9999999999999988765 888855 434444433322 2 26888999999888 68899999
Q ss_pred EEccccccc-CCchhHHHHHHHHHHcccCCcEEEEEeeccc---------------------------c-----------
Q 047630 303 HSMHVLSNW-IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV---------------------------G----------- 343 (392)
Q Consensus 303 ~s~~~l~~~-~~~~~l~~~L~el~RvLKPGG~lii~~~~~~---------------------------~----------- 343 (392)
++..++++. ....+...+++++.|+|||||++++...... .
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 217 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLL 217 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEET
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEc
Confidence 999999763 3456678899999999999999988753210 0
Q ss_pred c-------c--hHHHHHHHHHHcCCeEEEEEEe
Q 047630 344 A-------Q--LEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 344 ~-------~--l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
+ . ..+++.++++++||+.+.+...
T Consensus 218 ~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 218 DSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp TSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred hhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 0 0 1467999999999999998754
No 69
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.49 E-value=5.4e-14 Score=141.29 Aligned_cols=140 Identities=11% Similarity=0.141 Sum_probs=101.2
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEE-----EeccCcCCCCC
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLY-----ISISQRLPFFD 296 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~-----~~d~~~Lpf~d 296 (392)
..+++.++.......-..|||||||+|.++..+++.+..++| +|++..+.+.+.+++. +.. .++.+.+++++
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~g--vD~s~~~~~~a~~~~~-~~~~~~~~~~~~~~l~~~~ 169 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLG--FEPSSGVAAKAREKGI-RVRTDFFEKATADDVRRTE 169 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEE--ECCCHHHHHHHHTTTC-CEECSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEE--ECCCHHHHHHHHHcCC-CcceeeechhhHhhcccCC
Confidence 334444544322111223499999999999999999999988 6665566666666653 333 23455667778
Q ss_pred CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc-------c-----c----chHHHHHHHHHHcCCe
Q 047630 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV-------G-----A----QLEDVYVPLIESVGFN 360 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~-------~-----~----~l~~~l~~ll~~aGf~ 360 (392)
++||+|++..+++|+ .+...++++++|+|||||++++...... . + -..+.+.++++++||+
T Consensus 170 ~~fD~I~~~~vl~h~---~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~ 246 (416)
T 4e2x_A 170 GPANVIYAANTLCHI---PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFE 246 (416)
T ss_dssp CCEEEEEEESCGGGC---TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEE
T ss_pred CCEEEEEECChHHhc---CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCE
Confidence 999999999999998 3556799999999999999999754210 0 0 0156799999999999
Q ss_pred EEEEEEe
Q 047630 361 KLKWVVG 367 (392)
Q Consensus 361 ~i~w~~~ 367 (392)
.+.....
T Consensus 247 ~~~~~~~ 253 (416)
T 4e2x_A 247 LVDVQRL 253 (416)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9988754
No 70
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.49 E-value=3.4e-13 Score=133.99 Aligned_cols=136 Identities=15% Similarity=0.176 Sum_probs=97.9
Q ss_pred HHHHHhhCC-CCcccEEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccE
Q 047630 225 IDEVLATKK-PGTIRIGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDI 301 (392)
Q Consensus 225 I~~ll~l~~-~~~ir~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDl 301 (392)
+..++...+ -....+|||||||+|.++..+++.. ..+++ +|+ +...+.+.+...+.++.+|+.. |++++ |+
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~--~D~-~~~~~~a~~~~~v~~~~~d~~~-~~p~~--D~ 264 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAIN--FDL-PHVIQDAPAFSGVEHLGGDMFD-GVPKG--DA 264 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEE--EEC-HHHHTTCCCCTTEEEEECCTTT-CCCCC--SE
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEE--Eeh-HHHHHhhhhcCCCEEEecCCCC-CCCCC--CE
Confidence 444554332 2334556999999999999999954 45555 665 3333333333457899999876 77655 99
Q ss_pred EEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc--------------------------chHHHHHHHHH
Q 047630 302 VHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA--------------------------QLEDVYVPLIE 355 (392)
Q Consensus 302 V~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~--------------------------~l~~~l~~ll~ 355 (392)
|++..++|+|.+ +....+|++++++|||||+|++.++..... ...++|.++++
T Consensus 265 v~~~~vlh~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~ 343 (368)
T 3reo_A 265 IFIKWICHDWSD-EHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAM 343 (368)
T ss_dssp EEEESCGGGBCH-HHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHH
T ss_pred EEEechhhcCCH-HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHH
Confidence 999999999744 455689999999999999999887542211 11567999999
Q ss_pred HcCCeEEEEEEe
Q 047630 356 SVGFNKLKWVVG 367 (392)
Q Consensus 356 ~aGf~~i~w~~~ 367 (392)
++||+.++....
T Consensus 344 ~AGF~~v~~~~~ 355 (368)
T 3reo_A 344 ASGFRGFKVASC 355 (368)
T ss_dssp HTTCCEEEEEEE
T ss_pred HCCCeeeEEEEe
Confidence 999999987744
No 71
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.48 E-value=1.2e-13 Score=136.92 Aligned_cols=123 Identities=13% Similarity=0.147 Sum_probs=92.5
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc----C---CccEEEeccCcC--CCCCCcccEEEEcc
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR----G---VVPLYISISQRL--PFFDNTLDIVHSMH 306 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r----g---~i~~~~~d~~~L--pf~d~sFDlV~s~~ 306 (392)
++|||||||+|.++..+++. +..+++ +|+ +...+.+.++ + .+.++.+|.... |++ ++||+|++..
T Consensus 181 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~--~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~ 256 (363)
T 3dp7_A 181 KRLLDIGGNTGKWATQCVQYNKEVEVTI--VDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQ 256 (363)
T ss_dssp SEEEEESCTTCHHHHHHHHHSTTCEEEE--EEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEES
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCEEEE--EeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEec
Confidence 44599999999999999984 556766 555 4444433332 2 378899998875 565 7899999999
Q ss_pred cccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc--------------------------chHHHHHHHHHHcCCe
Q 047630 307 VLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA--------------------------QLEDVYVPLIESVGFN 360 (392)
Q Consensus 307 ~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~--------------------------~l~~~l~~ll~~aGf~ 360 (392)
++|+|. ++....+|++++|+|||||+|++.+...... ...++|.++++++||+
T Consensus 257 vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~ 335 (363)
T 3dp7_A 257 FLDCFS-EEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLE 335 (363)
T ss_dssp CSTTSC-HHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEE
T ss_pred hhhhCC-HHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCe
Confidence 999874 4455689999999999999998877532211 1267799999999999
Q ss_pred EEEEE
Q 047630 361 KLKWV 365 (392)
Q Consensus 361 ~i~w~ 365 (392)
.++..
T Consensus 336 ~v~~~ 340 (363)
T 3dp7_A 336 VEEIQ 340 (363)
T ss_dssp ESCCC
T ss_pred EEEEE
Confidence 87654
No 72
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.46 E-value=1.1e-12 Score=129.66 Aligned_cols=137 Identities=18% Similarity=0.211 Sum_probs=99.5
Q ss_pred HHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc------CCccEEEeccCcCCCCCCc
Q 047630 225 IDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR------GVVPLYISISQRLPFFDNT 298 (392)
Q Consensus 225 I~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r------g~i~~~~~d~~~Lpf~d~s 298 (392)
...++...+-...++|||||||+|.++..++++.+.+.++..|. +...+.+.++ ..++++.+|+...|.+ .
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~ 244 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--E 244 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--C
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--C
Confidence 34444433334455679999999999999999776655555666 4444333322 2478899998766554 4
Q ss_pred ccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc----------------------chHHHHHHHHHH
Q 047630 299 LDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA----------------------QLEDVYVPLIES 356 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~----------------------~l~~~l~~ll~~ 356 (392)
+|+|++.+++|+|.+ +....+|++++++|+|||+++|.+.....+ ...++|.+++++
T Consensus 245 ~D~~~~~~vlh~~~d-~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~ 323 (353)
T 4a6d_A 245 ADLYILARVLHDWAD-GKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSS 323 (353)
T ss_dssp CSEEEEESSGGGSCH-HHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHH
T ss_pred ceEEEeeeecccCCH-HHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHH
Confidence 799999999999844 445689999999999999998887643211 116779999999
Q ss_pred cCCeEEEEE
Q 047630 357 VGFNKLKWV 365 (392)
Q Consensus 357 aGf~~i~w~ 365 (392)
+||+.++..
T Consensus 324 AGf~~v~v~ 332 (353)
T 4a6d_A 324 AGFRDFQFK 332 (353)
T ss_dssp HTCEEEEEE
T ss_pred CCCceEEEE
Confidence 999999875
No 73
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.46 E-value=6.1e-13 Score=130.44 Aligned_cols=138 Identities=12% Similarity=0.145 Sum_probs=99.3
Q ss_pred ccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHH----hcC---CccEEEeccCcCC-CCCCcccEEEEcc
Q 047630 237 IRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQRLP-FFDNTLDIVHSMH 306 (392)
Q Consensus 237 ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~~Lp-f~d~sFDlV~s~~ 306 (392)
..+|||||||+|.++..+++. +..+++ +|+ ....+.+. +.+ .+.++.+|....+ +.++.||+|++..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~--~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQI--WDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEE--EEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEE--EEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEec
Confidence 345599999999999999986 456666 555 44433222 223 3788899988765 2345699999999
Q ss_pred cccccCCchhHHHHHHHHHHcccCCcEEEEEeecccc-----------------------cchHHHHHHHHHHcCCeEEE
Q 047630 307 VLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG-----------------------AQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 307 ~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~-----------------------~~l~~~l~~ll~~aGf~~i~ 363 (392)
++|+| +++....++++++++|||||+|++.+..... ....++|.++++++||+.++
T Consensus 257 vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 257 CLHYF-DAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp CGGGS-CHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred ccccC-CHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 99997 4455578999999999999999988753221 11166799999999999998
Q ss_pred EEEeeccCCCCcccceeeEEEEEcCC
Q 047630 364 WVVGRKLDRGPELREMYLSALLEKPF 389 (392)
Q Consensus 364 w~~~~k~d~~~~~~e~ylsai~~Kp~ 389 (392)
.. .+.+. ..+.+||.
T Consensus 336 ~~----------~g~~~-l~~a~kp~ 350 (352)
T 3mcz_A 336 RS----------IGRYT-LLIGQRSS 350 (352)
T ss_dssp EE----------ETTEE-EEEEECCC
T ss_pred ec----------cCceE-EEEEecCC
Confidence 32 12232 36788884
No 74
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.46 E-value=4.6e-13 Score=132.91 Aligned_cols=124 Identities=18% Similarity=0.164 Sum_probs=94.0
Q ss_pred ccEEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCc
Q 047630 237 IRIGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPT 314 (392)
Q Consensus 237 ir~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~ 314 (392)
...|||||||+|.++..+++.. ..+++ +|+ +...+.+.+...+.++.+|+.. |++++ |+|++..++|+|. +
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~--~D~-~~~~~~a~~~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~-d 274 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTIKGVN--FDL-PHVISEAPQFPGVTHVGGDMFK-EVPSG--DTILMKWILHDWS-D 274 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEE--EEC-HHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGSC-H
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCeEEE--ecC-HHHHHhhhhcCCeEEEeCCcCC-CCCCC--CEEEehHHhccCC-H
Confidence 3456999999999999999854 45555 566 4333333333458899999887 77765 9999999999974 4
Q ss_pred hhHHHHHHHHHHcccCCcEEEEEeeccccc--------------------------chHHHHHHHHHHcCCeEEEEEEe
Q 047630 315 TLLHFLMFDIYRVLRPGGLFWLDHFFCVGA--------------------------QLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 315 ~~l~~~L~el~RvLKPGG~lii~~~~~~~~--------------------------~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
++...+|++++++|||||+|++.++..... ...++|.++++++||+.++....
T Consensus 275 ~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~ 353 (364)
T 3p9c_A 275 QHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYI 353 (364)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEEc
Confidence 455689999999999999999887543211 11567999999999999988744
No 75
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.46 E-value=2.1e-13 Score=126.34 Aligned_cols=127 Identities=21% Similarity=0.261 Sum_probs=89.3
Q ss_pred EEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhc----C-CccEEEeccCcC--CCCCCcccEEEE-ccccc-
Q 047630 240 GLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASR----G-VVPLYISISQRL--PFFDNTLDIVHS-MHVLS- 309 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~r----g-~i~~~~~d~~~L--pf~d~sFDlV~s-~~~l~- 309 (392)
|||||||+|.++..+++.+. .+++ +|++..+.+.+.++ + .+.++++|...+ ++++++||+|++ .+.++
T Consensus 64 vLDiGcGtG~~~~~l~~~~~~~v~g--vD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~ 141 (236)
T 1zx0_A 64 VLEVGFGMAIAASKVQEAPIDEHWI--IECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSE 141 (236)
T ss_dssp EEEECCTTSHHHHHHHTSCEEEEEE--EECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBG
T ss_pred EEEEeccCCHHHHHHHhcCCCeEEE--EcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcccch
Confidence 49999999999999988665 6777 55544555444332 2 367888998888 899999999999 55541
Q ss_pred ccCCchhHHHHHHHHHHcccCCcEEEEEeecccc-----------cchHHHHHHHHHHcCCeE--EEEEEee
Q 047630 310 NWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG-----------AQLEDVYVPLIESVGFNK--LKWVVGR 368 (392)
Q Consensus 310 ~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~-----------~~l~~~l~~ll~~aGf~~--i~w~~~~ 368 (392)
+.......+.++++++|+|||||+|++.++.... ....+.....+.++||+. +.+....
T Consensus 142 ~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~i~~~~~~ 213 (236)
T 1zx0_A 142 ETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENIRTEVMA 213 (236)
T ss_dssp GGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCGGGEEEEEEE
T ss_pred hhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCCCceeEEEEe
Confidence 1122345567899999999999999987653211 111344566789999984 6665444
No 76
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.45 E-value=5.4e-13 Score=130.05 Aligned_cols=125 Identities=11% Similarity=0.071 Sum_probs=93.6
Q ss_pred cccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh----c---CCccEEEeccCcCCCCCCcccEEEEcc
Q 047630 236 TIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS----R---GVVPLYISISQRLPFFDNTLDIVHSMH 306 (392)
Q Consensus 236 ~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~----r---g~i~~~~~d~~~Lpf~d~sFDlV~s~~ 306 (392)
...+|||||||+|.++..+++. +..+++ +|+ ....+.+.+ . ..+.+..+|.. .+++. .||+|++.+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~--~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~ 243 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTV--LDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSA 243 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEE--EEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEES
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEE--ecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEeh
Confidence 3456699999999999999985 455666 556 444443332 2 24788899886 45555 899999999
Q ss_pred cccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc------------------chHHHHHHHHHHcCCeEEEEEE
Q 047630 307 VLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA------------------QLEDVYVPLIESVGFNKLKWVV 366 (392)
Q Consensus 307 ~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~------------------~l~~~l~~ll~~aGf~~i~w~~ 366 (392)
++|+|. ++....+|++++++|||||++++.+...... ...++|.++++++||+.++...
T Consensus 244 vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 244 VLHDWD-DLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp CGGGSC-HHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred hhccCC-HHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 999974 4445689999999999999999987643321 1167799999999999998763
No 77
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.44 E-value=7.6e-13 Score=119.53 Aligned_cols=118 Identities=14% Similarity=0.131 Sum_probs=88.4
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHh----cCC--ccEEEeccCcCCCCCCcccEEEE
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIAS----RGV--VPLYISISQRLPFFDNTLDIVHS 304 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~----rg~--i~~~~~d~~~Lpf~d~sFDlV~s 304 (392)
.++.+| ||+|||+|.++..+++.+. .++++|++ ..+.+.+.+ .+. +.+..+|.... .+++||+|++
T Consensus 59 ~~~~~v---LDiG~G~G~~~~~l~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~ 131 (205)
T 3grz_A 59 VKPLTV---ADVGTGSGILAIAAHKLGAKSVLATDIS--DESMTAAEENAALNGIYDIALQKTSLLAD--VDGKFDLIVA 131 (205)
T ss_dssp SSCCEE---EEETCTTSHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHTTCCCCEEEESSTTTT--CCSCEEEEEE
T ss_pred cCCCEE---EEECCCCCHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHcCCCceEEEecccccc--CCCCceEEEE
Confidence 344445 9999999999999998765 88885543 444443332 232 67888887664 4689999999
Q ss_pred cccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEE
Q 047630 305 MHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 305 ~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
...+++ +..+++++.++|||||++++..+... ..+.+.+.++++||+.+...
T Consensus 132 ~~~~~~------~~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 132 NILAEI------LLDLIPQLDSHLNEDGQVIFSGIDYL---QLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp ESCHHH------HHHHGGGSGGGEEEEEEEEEEEEEGG---GHHHHHHHHHHTTEEEEEEE
T ss_pred CCcHHH------HHHHHHHHHHhcCCCCEEEEEecCcc---cHHHHHHHHHHcCCceEEee
Confidence 887755 35789999999999999999876543 23458889999999998765
No 78
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.44 E-value=2.1e-12 Score=127.28 Aligned_cols=124 Identities=16% Similarity=0.280 Sum_probs=93.7
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh----cC---CccEEEeccCcCCCCCCcccEEEEcccc
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQRLPFFDNTLDIVHSMHVL 308 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l 308 (392)
.+|||||||+|.++..+++. +.+++++ |+ ....+.+.+ .+ .+.++.+|....++++. |+|++..++
T Consensus 192 ~~vLDvG~G~G~~~~~l~~~~p~~~~~~~--D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~vl 266 (359)
T 1x19_A 192 KKMIDVGGGIGDISAAMLKHFPELDSTIL--NL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRIL 266 (359)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTCEEEEE--EC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESCG
T ss_pred CEEEEECCcccHHHHHHHHHCCCCeEEEE--ec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEechh
Confidence 44599999999999999986 4577774 45 444443332 23 37889999988877654 999999999
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEEEEEeeccc-------------------c-c----chHHHHHHHHHHcCCeEEEE
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV-------------------G-A----QLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~-------------------~-~----~l~~~l~~ll~~aGf~~i~w 364 (392)
|+| +++....+++++.++|||||++++.++... . + ...++|.++++++||+.+++
T Consensus 267 h~~-~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~ 345 (359)
T 1x19_A 267 YSA-NEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTM 345 (359)
T ss_dssp GGS-CHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEE
T ss_pred ccC-CHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEE
Confidence 997 444467899999999999999988774321 1 1 23566999999999999987
Q ss_pred EEe
Q 047630 365 VVG 367 (392)
Q Consensus 365 ~~~ 367 (392)
...
T Consensus 346 ~~~ 348 (359)
T 1x19_A 346 VRK 348 (359)
T ss_dssp EEE
T ss_pred Eec
Confidence 743
No 79
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.43 E-value=1.3e-12 Score=126.90 Aligned_cols=122 Identities=15% Similarity=0.168 Sum_probs=93.3
Q ss_pred EEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh----cC---CccEEEeccCcCCCCCCcccEEEEccccc
Q 047630 239 IGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQRLPFFDNTLDIVHSMHVLS 309 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~ 309 (392)
+|||+|||+|.++..+++. +.+++++ |++ ...+.+.+ .+ .+.+..+|....+++++ ||+|++..++|
T Consensus 168 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~--D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l~ 243 (335)
T 2r3s_A 168 KVLDISASHGLFGIAVAQHNPNAEIFGV--DWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFLH 243 (335)
T ss_dssp EEEEETCTTCHHHHHHHHHCTTCEEEEE--ECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCGG
T ss_pred EEEEECCCcCHHHHHHHHHCCCCeEEEE--ecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchhc
Confidence 4499999999999999986 5678774 453 33332222 22 37889999888777655 99999999999
Q ss_pred ccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc-----------------------chHHHHHHHHHHcCCeEEEEE
Q 047630 310 NWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA-----------------------QLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 310 ~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~-----------------------~l~~~l~~ll~~aGf~~i~w~ 365 (392)
++ +++....+++++.++|||||++++.++..... ...+++.++++++||+.+++.
T Consensus 244 ~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 244 HF-DVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp GS-CHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred cC-CHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 86 44555789999999999999998887643221 116679999999999999876
No 80
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.43 E-value=1.8e-12 Score=128.66 Aligned_cols=136 Identities=16% Similarity=0.211 Sum_probs=98.4
Q ss_pred HHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh----cC---CccEEEeccCcCCCC
Q 047630 225 IDEVLATKKPGTIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQRLPFF 295 (392)
Q Consensus 225 I~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~Lpf~ 295 (392)
+..++...+-....+|||||||+|.++..+++. +..+++ +|+ ....+.+.+ .+ .+.+..+|.. .+++
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~--~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p 266 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTL--LER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIP 266 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEE--EEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCC
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEE--EcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCC
Confidence 344444332233455699999999999999996 456666 555 444443322 22 4788999987 4666
Q ss_pred CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc--------------------chHHHHHHHHH
Q 047630 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA--------------------QLEDVYVPLIE 355 (392)
Q Consensus 296 d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~--------------------~l~~~l~~ll~ 355 (392)
. .||+|++..++|+| +++....+|++++++|||||+|++.+...... ...++|.++++
T Consensus 267 ~-~~D~v~~~~vlh~~-~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~ 344 (369)
T 3gwz_A 267 D-GADVYLIKHVLHDW-DDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLE 344 (369)
T ss_dssp S-SCSEEEEESCGGGS-CHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHH
T ss_pred C-CceEEEhhhhhccC-CHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHH
Confidence 5 79999999999987 44444579999999999999999987654331 11677999999
Q ss_pred HcCCeEEEEEE
Q 047630 356 SVGFNKLKWVV 366 (392)
Q Consensus 356 ~aGf~~i~w~~ 366 (392)
++||+.++...
T Consensus 345 ~aGf~~~~~~~ 355 (369)
T 3gwz_A 345 KSGLRVERSLP 355 (369)
T ss_dssp TTTEEEEEEEE
T ss_pred HCCCeEEEEEE
Confidence 99999998863
No 81
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.43 E-value=1.5e-12 Score=115.62 Aligned_cols=132 Identities=8% Similarity=0.022 Sum_probs=85.4
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHH----hcC--CccEEEeccCcCC-CCCCcccEEEE
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIA----SRG--VVPLYISISQRLP-FFDNTLDIVHS 304 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa----~rg--~i~~~~~d~~~Lp-f~d~sFDlV~s 304 (392)
.++.+| ||+|||+|.++..+++.+..|+++|++ ..+.+.+. +.+ .+.+++++...++ +.+++||+|++
T Consensus 21 ~~~~~v---LDiGcG~G~~~~~la~~~~~v~~vD~s--~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 21 DDESIV---VDATMGNGNDTAFLAGLSKKVYAFDVQ--EQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CTTCEE---EESCCTTSHHHHHHHTTSSEEEEEESC--HHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCEE---EEEcCCCCHHHHHHHHhCCEEEEEECC--HHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEE
Confidence 344555 999999999999999998999995544 44444332 223 3678887777653 45788999998
Q ss_pred ccccccc------CCchhHHHHHHHHHHcccCCcEEEEEeeccccc--chHHHHHHHH---HHcCCeEEEEEEee
Q 047630 305 MHVLSNW------IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA--QLEDVYVPLI---ESVGFNKLKWVVGR 368 (392)
Q Consensus 305 ~~~l~~~------~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~--~l~~~l~~ll---~~aGf~~i~w~~~~ 368 (392)
+....+. ........+++++.|+|||||++++..+..... +..+.+.+.+ ...+|...++....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 170 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLN 170 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESS
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhc
Confidence 7433221 123455678999999999999999987653322 1122233444 44568888877654
No 82
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.43 E-value=4.2e-13 Score=128.46 Aligned_cols=126 Identities=11% Similarity=0.055 Sum_probs=84.7
Q ss_pred EEEEEcCCcchHHHH----HHHc--CCEEEEEecCCCchhHHHHHhc-----C--CccE--EEeccCcCC------CCCC
Q 047630 239 IGLDIGGGVATFAVR----MMER--NITIVTTSMNLNGPFNNFIASR-----G--VVPL--YISISQRLP------FFDN 297 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~----La~~--g~~vvg~~iD~~a~~~~~aa~r-----g--~i~~--~~~d~~~Lp------f~d~ 297 (392)
.|||||||+|.++.. ++.+ +..+..+++|++..+.+.+.++ + .+.+ ..++.+.++ ++++
T Consensus 55 ~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 134 (292)
T 2aot_A 55 KILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKELQ 134 (292)
T ss_dssp EEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCCC
T ss_pred eEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCCC
Confidence 459999999976543 3333 4444223477766665543332 2 1233 344454443 5689
Q ss_pred cccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccc--------------------cchHHHHHHHHHHc
Q 047630 298 TLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG--------------------AQLEDVYVPLIESV 357 (392)
Q Consensus 298 sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~--------------------~~l~~~l~~ll~~a 357 (392)
+||+|++..++||+ .+...+|++++|+|||||+|++....... ....+++.++++++
T Consensus 135 ~fD~V~~~~~l~~~---~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 211 (292)
T 2aot_A 135 KWDFIHMIQMLYYV---KDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNL 211 (292)
T ss_dssp CEEEEEEESCGGGC---SCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHHH
T ss_pred ceeEEEEeeeeeec---CCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHHHC
Confidence 99999999999998 44457999999999999999887532110 01156789999999
Q ss_pred CCeEEEEEEe
Q 047630 358 GFNKLKWVVG 367 (392)
Q Consensus 358 Gf~~i~w~~~ 367 (392)
||+.+.....
T Consensus 212 Gf~~~~~~~~ 221 (292)
T 2aot_A 212 GLKYECYDLL 221 (292)
T ss_dssp TCCEEEEEEC
T ss_pred CCceEEEEec
Confidence 9998875543
No 83
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.43 E-value=4e-12 Score=112.37 Aligned_cols=132 Identities=15% Similarity=0.077 Sum_probs=95.4
Q ss_pred HHHHHHHHHhh--CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCc
Q 047630 221 LDFSIDEVLAT--KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNT 298 (392)
Q Consensus 221 ~~~lI~~ll~l--~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~s 298 (392)
.+.+++. +.. .++++| ||+|||+|.++..+++.+ .++|+|++ ..+.+. ...+.++++|+.. ++++++
T Consensus 10 ~~~l~~~-l~~~~~~~~~v---LD~GcG~G~~~~~l~~~~-~v~gvD~s--~~~~~~---~~~~~~~~~d~~~-~~~~~~ 78 (170)
T 3q87_B 10 TYTLMDA-LEREGLEMKIV---LDLGTSTGVITEQLRKRN-TVVSTDLN--IRALES---HRGGNLVRADLLC-SINQES 78 (170)
T ss_dssp HHHHHHH-HHHHTCCSCEE---EEETCTTCHHHHHHTTTS-EEEEEESC--HHHHHT---CSSSCEEECSTTT-TBCGGG
T ss_pred HHHHHHH-HHhhcCCCCeE---EEeccCccHHHHHHHhcC-cEEEEECC--HHHHhc---ccCCeEEECChhh-hcccCC
Confidence 4445555 433 444555 999999999999999998 88885543 333333 3347899999877 667789
Q ss_pred ccEEEEcccccccCCc------hhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEe
Q 047630 299 LDIVHSMHVLSNWIPT------TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~------~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
||+|+++..+++..+. .....++.++.+.| |||.+++..... ...+.+.++++++||+.+.....
T Consensus 79 fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~---~~~~~l~~~l~~~gf~~~~~~~~ 149 (170)
T 3q87_B 79 VDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA---NRPKEVLARLEERGYGTRILKVR 149 (170)
T ss_dssp CSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG---GCHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC---CCHHHHHHHHHHCCCcEEEEEee
Confidence 9999999888753332 12236889999999 999998876433 22345888999999998776643
No 84
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.42 E-value=1.3e-12 Score=122.93 Aligned_cols=131 Identities=11% Similarity=0.048 Sum_probs=92.6
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc-C--CEEEEEecCCCc----hhHHHH----HhcC---CccEEEec---cCcCC
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER-N--ITIVTTSMNLNG----PFNNFI----ASRG---VVPLYISI---SQRLP 293 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~-g--~~vvg~~iD~~a----~~~~~a----a~rg---~i~~~~~d---~~~Lp 293 (392)
+.++.+| ||||||+|.++..+++. + ..++++|++... ...+.+ ...+ .+.+..+| ...+|
T Consensus 41 ~~~~~~v---LDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 117 (275)
T 3bkx_A 41 VKPGEKI---LEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGP 117 (275)
T ss_dssp CCTTCEE---EEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGG
T ss_pred CCCCCEE---EEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCC
Confidence 4455555 99999999999999986 4 688885554410 033322 2222 36788887 56678
Q ss_pred CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc-----------------------------
Q 047630 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA----------------------------- 344 (392)
Q Consensus 294 f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~----------------------------- 344 (392)
+++++||+|++..+++|+.++. .+++.+.++++|||++++.++.....
T Consensus 118 ~~~~~fD~v~~~~~l~~~~~~~---~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (275)
T 3bkx_A 118 IADQHFDRVVLAHSLWYFASAN---ALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIR 194 (275)
T ss_dssp GTTCCCSEEEEESCGGGSSCHH---HHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCC
T ss_pred CCCCCEEEEEEccchhhCCCHH---HHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccccccccc
Confidence 8889999999999999974443 46777777777799999986532110
Q ss_pred --chHHHHHHHHHHcCCeEEEEEEe
Q 047630 345 --QLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 345 --~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
...+.+.++++++||+.+.....
T Consensus 195 ~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 195 TLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred ccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 01456889999999999887644
No 85
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.42 E-value=1.9e-12 Score=126.08 Aligned_cols=123 Identities=14% Similarity=0.056 Sum_probs=92.9
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc-------CCccEEEeccCcCCCCCCcccEEEEcccc
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR-------GVVPLYISISQRLPFFDNTLDIVHSMHVL 308 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r-------g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l 308 (392)
.+|||||||+|.++..+++. +..++++|+ ....+.+.++ ..+.++.+|... +++ ++||+|++..++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl 243 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR---EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRII 243 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC---TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc---HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhc
Confidence 56699999999999999986 567777554 3333332221 347889998876 555 679999999999
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEEEEEeecccc---------------------cchHHHHHHHHHHcCCeEEEEEE
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG---------------------AQLEDVYVPLIESVGFNKLKWVV 366 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~---------------------~~l~~~l~~ll~~aGf~~i~w~~ 366 (392)
|+| +++....++++++++|||||++++.+..... ....++|.++++++||+.++...
T Consensus 244 ~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 321 (334)
T 2ip2_A 244 GDL-DEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVD 321 (334)
T ss_dssp GGC-CHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred cCC-CHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEE
Confidence 997 4444568999999999999999988754221 11266799999999999988763
No 86
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.42 E-value=5.3e-13 Score=120.83 Aligned_cols=94 Identities=20% Similarity=0.261 Sum_probs=76.9
Q ss_pred EEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEEcccccccCCchh
Q 047630 239 IGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTL 316 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~ 316 (392)
.|||+|||+|.++..+ +. .+++ +|++..+.+.+.++ ..+.+++++...+|+++++||+|++..+++|+. +
T Consensus 39 ~vLdiG~G~G~~~~~l---~~~~v~~--vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~---~ 110 (211)
T 2gs9_A 39 SLLEVGAGTGYWLRRL---PYPQKVG--VEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE---D 110 (211)
T ss_dssp EEEEETCTTCHHHHHC---CCSEEEE--ECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS---C
T ss_pred eEEEECCCCCHhHHhC---CCCeEEE--EeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC---C
Confidence 4499999999999888 66 8888 55645555555544 247889999999999999999999999999973 4
Q ss_pred HHHHHHHHHHcccCCcEEEEEeec
Q 047630 317 LHFLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 317 l~~~L~el~RvLKPGG~lii~~~~ 340 (392)
...+++++.|+|||||.+++..+.
T Consensus 111 ~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 111 VERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEEEecC
Confidence 457999999999999999998753
No 87
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.42 E-value=1.6e-12 Score=127.83 Aligned_cols=125 Identities=14% Similarity=0.097 Sum_probs=90.9
Q ss_pred ccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHH--H---hcCCccEEEeccCcCCCCCCcccEEEEccccccc
Q 047630 237 IRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFI--A---SRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 237 ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~a--a---~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~ 311 (392)
..+|||||||+|.++..+++....+.++++|+ +...... . ....+.+..+|.. .+++ +||+|++..++|+|
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~~ 260 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRILHNW 260 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESCGGGS
T ss_pred CceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehhccCC
Confidence 34559999999999999999655544555666 3322210 0 0123788888885 3444 89999999999997
Q ss_pred CCchhHHHHHHHHHHcccCCcEEEEEeeccccc---------------------chHHHHHHHHHHcCCeEEEEEE
Q 047630 312 IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA---------------------QLEDVYVPLIESVGFNKLKWVV 366 (392)
Q Consensus 312 ~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~---------------------~l~~~l~~ll~~aGf~~i~w~~ 366 (392)
. +.....+|++++|+|||||+|++.+...... ...++|.++++++||+.++...
T Consensus 261 ~-d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 261 G-DEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp C-HHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred C-HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 4 3444689999999999999999887533211 1267799999999999998764
No 88
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.41 E-value=1.8e-12 Score=122.19 Aligned_cols=114 Identities=15% Similarity=0.098 Sum_probs=86.6
Q ss_pred EEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHH----HHhcCC-ccEEEeccCcCCCCCCcccEEEEcccccccCCc
Q 047630 240 GLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNF----IASRGV-VPLYISISQRLPFFDNTLDIVHSMHVLSNWIPT 314 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~----aa~rg~-i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~ 314 (392)
|||+|||+|.++..+++.+..++++|+|. ...+. +...+. +.+..++.... +++++||+|+++...++
T Consensus 124 VLDiGcG~G~l~~~la~~g~~v~gvDi~~--~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~~---- 196 (254)
T 2nxc_A 124 VLDLGTGSGVLAIAAEKLGGKALGVDIDP--MVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAEL---- 196 (254)
T ss_dssp EEEETCTTSHHHHHHHHTTCEEEEEESCG--GGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHHH----
T ss_pred EEEecCCCcHHHHHHHHhCCeEEEEECCH--HHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHHH----
Confidence 49999999999999999988998866554 33332 223343 67777776552 45678999999765433
Q ss_pred hhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEE
Q 047630 315 TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 315 ~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
+..++.++.++|||||++++..+.... .+.+.+.++++||+.+...
T Consensus 197 --~~~~l~~~~~~LkpgG~lils~~~~~~---~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 197 --HAALAPRYREALVPGGRALLTGILKDR---APLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp --HHHHHHHHHHHEEEEEEEEEEEEEGGG---HHHHHHHHHHTTCEEEEEE
T ss_pred --HHHHHHHHHHHcCCCCEEEEEeeccCC---HHHHHHHHHHCCCEEEEEe
Confidence 457999999999999999998765432 4558889999999998875
No 89
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.41 E-value=4.1e-13 Score=123.68 Aligned_cols=128 Identities=13% Similarity=0.097 Sum_probs=92.3
Q ss_pred HHHHHHHHh--hCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc-CCccEEEecc-CcCCCC-C
Q 047630 222 DFSIDEVLA--TKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR-GVVPLYISIS-QRLPFF-D 296 (392)
Q Consensus 222 ~~lI~~ll~--l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~-~~Lpf~-d 296 (392)
+.+++.++. +.++.+| ||||||+|.++..+++.+..++++| ++..+.+.+.++ ..+.++++|. +.+|++ +
T Consensus 35 ~~l~~~~~~~~~~~~~~v---LDiGcG~G~~~~~l~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~ 109 (226)
T 3m33_A 35 ELTFDLWLSRLLTPQTRV---LEAGCGHGPDAARFGPQAARWAAYD--FSPELLKLARANAPHADVYEWNGKGELPAGLG 109 (226)
T ss_dssp THHHHHHHHHHCCTTCEE---EEESCTTSHHHHHHGGGSSEEEEEE--SCHHHHHHHHHHCTTSEEEECCSCSSCCTTCC
T ss_pred HHHHHHHHHhcCCCCCeE---EEeCCCCCHHHHHHHHcCCEEEEEE--CCHHHHHHHHHhCCCceEEEcchhhccCCcCC
Confidence 444554443 3344555 9999999999999999999999955 544555555444 2478999998 678888 8
Q ss_pred CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEe
Q 047630 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
++||+|++.. +.. .+++++.++|||||+++...... . .+.+.+.++++||+.+.....
T Consensus 110 ~~fD~v~~~~------~~~---~~l~~~~~~LkpgG~l~~~~~~~---~-~~~~~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 110 APFGLIVSRR------GPT---SVILRLPELAAPDAHFLYVGPRL---N-VPEVPERLAAVGWDIVAEDHV 167 (226)
T ss_dssp CCEEEEEEES------CCS---GGGGGHHHHEEEEEEEEEEESSS---C-CTHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEeCC------CHH---HHHHHHHHHcCCCcEEEEeCCcC---C-HHHHHHHHHHCCCeEEEEEee
Confidence 9999999872 112 47899999999999998222111 1 234788999999998876543
No 90
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.41 E-value=1.2e-12 Score=126.83 Aligned_cols=99 Identities=11% Similarity=0.054 Sum_probs=70.8
Q ss_pred EEEEEcCCcchHHHHHHHc-CCEEEEEecCCCchhHHHHHhc----CC--------ccEEEecc------CcC--CCCCC
Q 047630 239 IGLDIGGGVATFAVRMMER-NITIVTTSMNLNGPFNNFIASR----GV--------VPLYISIS------QRL--PFFDN 297 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-g~~vvg~~iD~~a~~~~~aa~r----g~--------i~~~~~d~------~~L--pf~d~ 297 (392)
.|||||||+|..+..++.. +..|+|+| ++..+.+.+.++ +. +.+.+.++ +.+ +++++
T Consensus 51 ~VLDlGCG~G~~l~~~~~~~~~~v~GiD--~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~ 128 (302)
T 2vdw_A 51 KVLAIDFGNGADLEKYFYGEIALLVATD--PDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFG 128 (302)
T ss_dssp EEEETTCTTTTTHHHHHHTTCSEEEEEE--SCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSS
T ss_pred eEEEEecCCcHhHHHHHhcCCCeEEEEE--CCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 3499999999877666654 46888854 544555443332 21 34666665 333 35678
Q ss_pred cccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 298 TLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 298 sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
+||+|+|.+++|+..+.++...++++++|+|||||+|++...
T Consensus 129 ~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 129 KFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 999999999998754444567999999999999999987754
No 91
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.41 E-value=7.7e-13 Score=124.30 Aligned_cols=97 Identities=22% Similarity=0.342 Sum_probs=78.3
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhHH
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLH 318 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~ 318 (392)
.|||||||+|.++..+++.+..++++| ++..+.+.+.++....++++|...+++++++||+|++..++.|+.++ ..
T Consensus 57 ~vLDiGcG~G~~~~~l~~~~~~v~gvD--~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~--~~ 132 (260)
T 2avn_A 57 RVLDLGGGTGKWSLFLQERGFEVVLVD--PSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN--KD 132 (260)
T ss_dssp EEEEETCTTCHHHHHHHTTTCEEEEEE--SCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC--HH
T ss_pred eEEEeCCCcCHHHHHHHHcCCeEEEEe--CCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc--HH
Confidence 349999999999999999999998854 54455555555432248889999999989999999999877776443 56
Q ss_pred HHHHHHHHcccCCcEEEEEee
Q 047630 319 FLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 319 ~~L~el~RvLKPGG~lii~~~ 339 (392)
.+++++.|+|||||.+++...
T Consensus 133 ~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 133 KAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEeC
Confidence 899999999999999998764
No 92
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.40 E-value=3.3e-12 Score=125.62 Aligned_cols=126 Identities=21% Similarity=0.221 Sum_probs=90.8
Q ss_pred cEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHH----hcC---CccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 238 RIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
.+|||||||+|.++..+++.+..+.++++|+ ....+.+. +.+ .+.++.+|... +++. .||+|++..++|+
T Consensus 185 ~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl~~ 261 (360)
T 1tw3_A 185 RHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFVLLN 261 (360)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESCGGG
T ss_pred cEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEcccccC
Confidence 3459999999999999998654333344555 44444332 222 37888888765 3444 4999999999998
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEeec-cccc---------------------chHHHHHHHHHHcCCeEEEEEEe
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDHFF-CVGA---------------------QLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~~~-~~~~---------------------~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
| ++.....+++++.++|||||++++.++. .... ...++|.++++++||+.++....
T Consensus 262 ~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 339 (360)
T 1tw3_A 262 W-PDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQL 339 (360)
T ss_dssp S-CHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred C-CHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEeC
Confidence 7 3444457999999999999999988765 2111 11567999999999999987644
No 93
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.40 E-value=2.6e-12 Score=126.90 Aligned_cols=124 Identities=23% Similarity=0.204 Sum_probs=90.0
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh----cC---CccEEEeccCcCCCCCCcccEEEEcccc
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQRLPFFDNTLDIVHSMHVL 308 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l 308 (392)
.+|||||||+|.++..+++. +..+++ +|+ ....+.+.+ .+ .+.++.+|... +++. .||+|++..++
T Consensus 184 ~~vlDvG~G~G~~~~~l~~~~~~~~~~~--~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl 258 (374)
T 1qzz_A 184 RHVLDVGGGNGGMLAAIALRAPHLRGTL--VEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFVL 258 (374)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTCEEEE--EEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESCG
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCEEEE--EeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEeccc
Confidence 34599999999999999986 456666 555 444443332 22 47888898765 4444 39999999999
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEEEEEee--ccccc---------------------chHHHHHHHHHHcCCeEEEEE
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF--FCVGA---------------------QLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~lii~~~--~~~~~---------------------~l~~~l~~ll~~aGf~~i~w~ 365 (392)
|+|. +.....+++++.++|||||++++.+. ..... ...++|.++++++||+.++..
T Consensus 259 ~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~ 337 (374)
T 1qzz_A 259 LNWS-DEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASER 337 (374)
T ss_dssp GGSC-HHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEE
T ss_pred cCCC-HHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 9873 34445799999999999999988776 42211 125679999999999998877
Q ss_pred Ee
Q 047630 366 VG 367 (392)
Q Consensus 366 ~~ 367 (392)
..
T Consensus 338 ~~ 339 (374)
T 1qzz_A 338 TS 339 (374)
T ss_dssp EE
T ss_pred EC
Confidence 44
No 94
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=6.2e-13 Score=123.29 Aligned_cols=129 Identities=9% Similarity=-0.042 Sum_probs=94.9
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc---CCccEEEeccCcCCCCC-----CcccEEE
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR---GVVPLYISISQRLPFFD-----NTLDIVH 303 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r---g~i~~~~~d~~~Lpf~d-----~sFDlV~ 303 (392)
.++.+| ||+|||+|.++..+++.+..++++| ++..+.+.+.++ ..+.++++|+..+++.. ..||+|+
T Consensus 55 ~~~~~v---LD~GcG~G~~~~~la~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~ 129 (245)
T 3ggd_A 55 NPELPL---IDFACGNGTQTKFLSQFFPRVIGLD--VSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIY 129 (245)
T ss_dssp CTTSCE---EEETCTTSHHHHHHHHHSSCEEEEE--SCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEE
T ss_pred CCCCeE---EEEcCCCCHHHHHHHHhCCCEEEEE--CCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEE
Confidence 344555 9999999999999999888888855 534454444433 24788899988865432 3499999
Q ss_pred EcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccc-----------------------------hHHHHHHHH
Q 047630 304 SMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQ-----------------------------LEDVYVPLI 354 (392)
Q Consensus 304 s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~-----------------------------l~~~l~~ll 354 (392)
+..+++++ ++++...+++++.|+|||||++++.++...... ..+++.+++
T Consensus 130 ~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (245)
T 3ggd_A 130 MRTGFHHI-PVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF 208 (245)
T ss_dssp EESSSTTS-CGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC
T ss_pred EcchhhcC-CHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh
Confidence 99999885 556678899999999999999988876432211 135577777
Q ss_pred HHcCCeEEEEEEee
Q 047630 355 ESVGFNKLKWVVGR 368 (392)
Q Consensus 355 ~~aGf~~i~w~~~~ 368 (392)
+||+.+.-....
T Consensus 209 --aGf~~~~~~~~~ 220 (245)
T 3ggd_A 209 --PDFEILSQGEGL 220 (245)
T ss_dssp --TTEEEEEEECCB
T ss_pred --CCCEEEeccccc
Confidence 899998766443
No 95
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.39 E-value=1.3e-12 Score=129.63 Aligned_cols=124 Identities=16% Similarity=0.140 Sum_probs=92.0
Q ss_pred cEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhH
Q 047630 238 RIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLL 317 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l 317 (392)
..|||||||+|.++..++++...+.++.+|+ +...+.+.+...+.++.+|+.. ++++ ||+|++..++|+|.+ ...
T Consensus 211 ~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d-~~~ 285 (372)
T 1fp1_D 211 STLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPLSGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSD-EKC 285 (372)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTT-CCCC--EEEEEEESSGGGSCH-HHH
T ss_pred CEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhcCCCEEEeCCccc-CCCC--CCEEEEecccccCCH-HHH
Confidence 4559999999999999999765444444666 4433333332347889999877 6654 999999999999743 344
Q ss_pred HHHHHHHHHcccCCcEEEEEeeccccc-------------------------chHHHHHHHHHHcCCeEEEEEE
Q 047630 318 HFLMFDIYRVLRPGGLFWLDHFFCVGA-------------------------QLEDVYVPLIESVGFNKLKWVV 366 (392)
Q Consensus 318 ~~~L~el~RvLKPGG~lii~~~~~~~~-------------------------~l~~~l~~ll~~aGf~~i~w~~ 366 (392)
..+|++++|+|||||+|++.++..... ...++|.++++++||+.++...
T Consensus 286 ~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 286 IEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 589999999999999999886532110 1156799999999999998764
No 96
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.39 E-value=3.7e-12 Score=114.69 Aligned_cols=128 Identities=13% Similarity=0.134 Sum_probs=92.1
Q ss_pred HHHHHHHHhh-CCCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhc----CCccEEEeccCcCCCC
Q 047630 222 DFSIDEVLAT-KKPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASR----GVVPLYISISQRLPFF 295 (392)
Q Consensus 222 ~~lI~~ll~l-~~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~r----g~i~~~~~d~~~Lpf~ 295 (392)
..+.+.+... .++.+| ||+|||+|.++..+++.+. .++++| ++....+.+.++ ..+.+.++|...++++
T Consensus 30 ~~~~~~l~~~~~~~~~v---LdiGcG~G~~~~~l~~~~~~~v~~~D--~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~ 104 (215)
T 2pxx_A 30 SSFRALLEPELRPEDRI---LVLGCGNSALSYELFLGGFPNVTSVD--YSSVVVAAMQACYAHVPQLRWETMDVRKLDFP 104 (215)
T ss_dssp HHHHHHHGGGCCTTCCE---EEETCTTCSHHHHHHHTTCCCEEEEE--SCHHHHHHHHHHTTTCTTCEEEECCTTSCCSC
T ss_pred HHHHHHHHHhcCCCCeE---EEECCCCcHHHHHHHHcCCCcEEEEe--CCHHHHHHHHHhcccCCCcEEEEcchhcCCCC
Confidence 3344444433 344455 9999999999999999876 788855 534444444433 2478899999999998
Q ss_pred CCcccEEEEcccccccC------------CchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCC
Q 047630 296 DNTLDIVHSMHVLSNWI------------PTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGF 359 (392)
Q Consensus 296 d~sFDlV~s~~~l~~~~------------~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf 359 (392)
+++||+|++..+++++. .......+++++.|+|||||.+++..+... .....++...||
T Consensus 105 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~-----~~~~~~~~~~~~ 175 (215)
T 2pxx_A 105 SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP-----HFRTRHYAQAYY 175 (215)
T ss_dssp SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH-----HHHHHHHCCGGG
T ss_pred CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc-----HHHHHHHhcccc
Confidence 89999999998887643 124567899999999999999999876542 223456666666
No 97
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.38 E-value=5.5e-12 Score=113.91 Aligned_cols=118 Identities=19% Similarity=0.117 Sum_probs=85.4
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhHHHHHh----cC--CccEEEeccCcCCCCCCccc
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRLPFFDNTLD 300 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~Lpf~d~sFD 300 (392)
+.+.++.+| ||+|||+|.++..+++.+ ..++++| ++....+.+.+ .+ .+.++.+|........++||
T Consensus 36 l~~~~~~~v---LDiG~G~G~~~~~la~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 110 (204)
T 3e05_A 36 LRLQDDLVM---WDIGAGSASVSIEASNLMPNGRIFALE--RNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPD 110 (204)
T ss_dssp TTCCTTCEE---EEETCTTCHHHHHHHHHCTTSEEEEEE--CCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCS
T ss_pred cCCCCCCEE---EEECCCCCHHHHHHHHHCCCCEEEEEe--CCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCC
Confidence 344455555 999999999999999976 7888855 53444443332 23 36788888765544447899
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCe
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFN 360 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~ 360 (392)
+|++..+++ ....+++++.++|||||++++..... +..+.+.+.+++.||.
T Consensus 111 ~i~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 111 RVFIGGSGG------MLEEIIDAVDRRLKSEGVIVLNAVTL---DTLTKAVEFLEDHGYM 161 (204)
T ss_dssp EEEESCCTT------CHHHHHHHHHHHCCTTCEEEEEECBH---HHHHHHHHHHHHTTCE
T ss_pred EEEECCCCc------CHHHHHHHHHHhcCCCeEEEEEeccc---ccHHHHHHHHHHCCCc
Confidence 999988764 34579999999999999999976443 2234578889999983
No 98
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.37 E-value=1.1e-11 Score=113.04 Aligned_cols=126 Identities=16% Similarity=0.067 Sum_probs=90.5
Q ss_pred HHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cC---CccEEEeccCcCCCCCCcc
Q 047630 227 EVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQRLPFFDNTL 299 (392)
Q Consensus 227 ~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~Lpf~d~sF 299 (392)
..+.+.++.+| ||+|||+|.++..+++.+..|+++|++ ..+.+.+.+ .+ .+.++.+|+.........|
T Consensus 49 ~~l~~~~~~~v---LDlGcG~G~~~~~la~~~~~v~~vD~s--~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~ 123 (204)
T 3njr_A 49 AALAPRRGELL---WDIGGGSGSVSVEWCLAGGRAITIEPR--ADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLP 123 (204)
T ss_dssp HHHCCCTTCEE---EEETCTTCHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCC
T ss_pred HhcCCCCCCEE---EEecCCCCHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCC
Confidence 34445555555 999999999999999998899995544 444443332 22 3678889987743334579
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEee
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
|+|++...+ ..+ +++++.++|||||++++..... +....+.+.+++.||+..++....
T Consensus 124 D~v~~~~~~-------~~~-~l~~~~~~LkpgG~lv~~~~~~---~~~~~~~~~l~~~g~~i~~i~~~~ 181 (204)
T 3njr_A 124 EAVFIGGGG-------SQA-LYDRLWEWLAPGTRIVANAVTL---ESETLLTQLHARHGGQLLRIDIAQ 181 (204)
T ss_dssp SEEEECSCC-------CHH-HHHHHHHHSCTTCEEEEEECSH---HHHHHHHHHHHHHCSEEEEEEEEE
T ss_pred CEEEECCcc-------cHH-HHHHHHHhcCCCcEEEEEecCc---ccHHHHHHHHHhCCCcEEEEEeec
Confidence 999987644 234 8999999999999999886533 223447778899999988877554
No 99
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.37 E-value=2e-12 Score=123.85 Aligned_cols=109 Identities=16% Similarity=0.168 Sum_probs=81.1
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHH---HcCCEEEEEecCCCchhHHHHHhc--------CCccEEEeccC
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMM---ERNITIVTTSMNLNGPFNNFIASR--------GVVPLYISISQ 290 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La---~~g~~vvg~~iD~~a~~~~~aa~r--------g~i~~~~~d~~ 290 (392)
..+++.+...... .-.+|||||||+|.++..++ ..+..++|+| ++..+.+.+.++ ..+.++++|++
T Consensus 23 ~~~~~~l~~~~~~-~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 99 (299)
T 3g5t_A 23 SDFYKMIDEYHDG-ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSD--LSATMIKTAEVIKEGSPDTYKNVSFKISSSD 99 (299)
T ss_dssp HHHHHHHHHHCCS-CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEE--SCHHHHHHHHHHHHHCC-CCTTEEEEECCTT
T ss_pred HHHHHHHHHHhcC-CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEe--CCHHHHHHHHHHHHhccCCCCceEEEEcCHH
Confidence 3444545444321 22344999999999999999 4678888855 534444433322 24789999999
Q ss_pred cCCCCC------CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 291 RLPFFD------NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 291 ~Lpf~d------~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
.+++.+ ++||+|++..+++++ +...+++++.|+|||||.|++.
T Consensus 100 ~~~~~~~~~~~~~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 100 DFKFLGADSVDKQKIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp CCGGGCTTTTTSSCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hCCccccccccCCCeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEEE
Confidence 999887 899999999999887 3457999999999999999884
No 100
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.37 E-value=4.1e-13 Score=125.19 Aligned_cols=123 Identities=20% Similarity=0.255 Sum_probs=83.9
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHHHHHhc----C-CccEEEeccCcC--CCCCCcccEEE
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNFIASR----G-VVPLYISISQRL--PFFDNTLDIVH 303 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~~aa~r----g-~i~~~~~d~~~L--pf~d~sFDlV~ 303 (392)
.++++| ||||||+|..+..+++.+ ..+++ +|++....+.+.++ + .+.++.++++.+ ++++++||.|+
T Consensus 59 ~~G~rV---LdiG~G~G~~~~~~~~~~~~~v~~--id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 59 SKGGRV---LEVGFGMAIAASKVQEAPIDEHWI--IECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEE---EEECCTTSHHHHHHTTSCEEEEEE--EECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred cCCCeE---EEECCCccHHHHHHHHhCCcEEEE--EeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEE
Confidence 345566 999999999999999865 45777 55544555544332 2 256677776543 57889999997
Q ss_pred Ec-----ccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccc-----------cchHHHHHHHHHHcCCeEE
Q 047630 304 SM-----HVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG-----------AQLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 304 s~-----~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~-----------~~l~~~l~~ll~~aGf~~i 362 (392)
.- ..++|. .+.+.++++++|+|||||+|++.+..... ....+.+...+.++||+..
T Consensus 134 ~D~~~~~~~~~~~---~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~ 205 (236)
T 3orh_A 134 YDTYPLSEETWHT---HQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRE 205 (236)
T ss_dssp ECCCCCBGGGTTT---HHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGG
T ss_pred Eeeeecccchhhh---cchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEE
Confidence 53 333343 56678999999999999999876532111 1124456677889999753
No 101
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.35 E-value=6.6e-12 Score=116.74 Aligned_cols=118 Identities=14% Similarity=0.082 Sum_probs=85.2
Q ss_pred EEEEEcCCcchHHHHHHH--cCCEEEEEecCCCchhHHHHH----hcC--CccEEEeccCcCCCC---CCcccEEEEccc
Q 047630 239 IGLDIGGGVATFAVRMME--RNITIVTTSMNLNGPFNNFIA----SRG--VVPLYISISQRLPFF---DNTLDIVHSMHV 307 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~--~g~~vvg~~iD~~a~~~~~aa----~rg--~i~~~~~d~~~Lpf~---d~sFDlV~s~~~ 307 (392)
.|||||||+|.++..++. .+..++++| ++..+.+.+. +.+ .+.+++++++++++. +++||+|++..+
T Consensus 73 ~vLDiG~G~G~~~~~la~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~ 150 (240)
T 1xdz_A 73 TICDVGAGAGFPSLPIKICFPHLHVTIVD--SLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAV 150 (240)
T ss_dssp EEEEECSSSCTTHHHHHHHCTTCEEEEEE--SCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEECC
T ss_pred EEEEecCCCCHHHHHHHHhCCCCEEEEEe--CCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEecc
Confidence 349999999999999985 567888855 5344443322 223 278889998888764 689999998763
Q ss_pred ccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEE
Q 047630 308 LSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVV 366 (392)
Q Consensus 308 l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~ 366 (392)
..+..+++++.++|||||+|++..-....++. +.+.+.+++.||+.+....
T Consensus 151 -------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~-~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 151 -------ARLSVLSELCLPLVKKNGLFVALKAASAEEEL-NAGKKAITTLGGELENIHS 201 (240)
T ss_dssp -------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHH-HHHHHHHHHTTEEEEEEEE
T ss_pred -------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHH-HHHHHHHHHcCCeEeEEEE
Confidence 23457999999999999999887533333333 4477788999998876553
No 102
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.35 E-value=7.7e-12 Score=108.33 Aligned_cols=137 Identities=20% Similarity=0.200 Sum_probs=93.0
Q ss_pred EEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC--------CCCCcccEEEEccc
Q 047630 239 IGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP--------FFDNTLDIVHSMHV 307 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp--------f~d~sFDlV~s~~~ 307 (392)
.|||+|||+|.++..+++. +..++++|++. ... ...+.+..+|....+ +++++||+|++..+
T Consensus 25 ~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~---~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~ 97 (180)
T 1ej0_A 25 TVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP---MDP----IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMA 97 (180)
T ss_dssp EEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC---CCC----CTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred eEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc---ccc----cCcEEEEEcccccchhhhhhhccCCCCceeEEEECCC
Confidence 3499999999999999986 36888866543 111 133678888988876 77889999999888
Q ss_pred ccccCCch--h------HHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEeeccCCCCcccce
Q 047630 308 LSNWIPTT--L------LHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGRKLDRGPELREM 379 (392)
Q Consensus 308 l~~~~~~~--~------l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~~~~~e~ 379 (392)
+++..... . ...+++++.++|||||.+++..+..... ..+.+.+++. |+.+.+...... .....+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 171 (180)
T 1ej0_A 98 PNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGF---DEYLREIRSL-FTKVKVRKPDSS--RARSREV 171 (180)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTH---HHHHHHHHHH-EEEEEEECCTTS--CTTCCEE
T ss_pred ccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcH---HHHHHHHHHh-hhhEEeecCCcc--cccCceE
Confidence 76543221 1 1578999999999999999887654322 2355556654 777766522221 1244577
Q ss_pred eeEEEEEcC
Q 047630 380 YLSALLEKP 388 (392)
Q Consensus 380 ylsai~~Kp 388 (392)
|+.+...||
T Consensus 172 ~~~~~~~~~ 180 (180)
T 1ej0_A 172 YIVATGRKP 180 (180)
T ss_dssp EEEEEEECC
T ss_pred EEEEccCCC
Confidence 765555554
No 103
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.35 E-value=7.7e-12 Score=114.04 Aligned_cols=121 Identities=14% Similarity=0.149 Sum_probs=86.5
Q ss_pred EEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHH----hcC--CccEEEeccCcCC--CCCCcccEEEEcccc
Q 047630 239 IGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIA----SRG--VVPLYISISQRLP--FFDNTLDIVHSMHVL 308 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa----~rg--~i~~~~~d~~~Lp--f~d~sFDlV~s~~~l 308 (392)
.|||||||+|.++..+++. +..++|+| ++......+. ..+ .+.++.+|+..++ +++++||+|++.+..
T Consensus 44 ~vLDiGcG~G~~~~~la~~~p~~~v~gvD--~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~ 121 (214)
T 1yzh_A 44 IHVEVGSGKGAFVSGMAKQNPDINYIGID--IQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSD 121 (214)
T ss_dssp EEEEESCTTSHHHHHHHHHCTTSEEEEEE--SCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCC
T ss_pred eEEEEccCcCHHHHHHHHHCCCCCEEEEE--cCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCC
Confidence 3499999999999999986 46788855 4334443322 223 3778999988887 778899999998654
Q ss_pred cccCCch------hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEE
Q 047630 309 SNWIPTT------LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 309 ~~~~~~~------~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
.+ .... ....++.++.++|||||.|++... .....+.+.+.+++.||+.+...
T Consensus 122 ~~-~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~~~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 122 PW-PKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD---NRGLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp CC-CSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES---CHHHHHHHHHHHHHHTCEEEEEE
T ss_pred Cc-cccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC---CHHHHHHHHHHHHHCCCeeeecc
Confidence 32 1111 124699999999999999988642 22334556778889999887654
No 104
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.35 E-value=1.5e-11 Score=112.80 Aligned_cols=127 Identities=19% Similarity=0.172 Sum_probs=88.5
Q ss_pred CCCCcccEEEEEcCC-cchHHHHHHHc-CCEEEEEecCCCchhHHHH----HhcC-CccEEEeccCcC-CCCCCcccEEE
Q 047630 232 KKPGTIRIGLDIGGG-VATFAVRMMER-NITIVTTSMNLNGPFNNFI----ASRG-VVPLYISISQRL-PFFDNTLDIVH 303 (392)
Q Consensus 232 ~~~~~ir~VLDIGCG-tG~~a~~La~~-g~~vvg~~iD~~a~~~~~a----a~rg-~i~~~~~d~~~L-pf~d~sFDlV~ 303 (392)
.++.+| ||+||| +|.++..+++. +..++++|+| ....+.+ ...+ .+.++++|...+ ++++++||+|+
T Consensus 54 ~~~~~v---LDlG~G~~G~~~~~la~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~ 128 (230)
T 3evz_A 54 RGGEVA---LEIGTGHTAMMALMAEKFFNCKVTATEVD--EEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIF 128 (230)
T ss_dssp CSSCEE---EEECCTTTCHHHHHHHHHHCCEEEEEECC--HHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEE
T ss_pred CCCCEE---EEcCCCHHHHHHHHHHHhcCCEEEEEECC--HHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEE
Confidence 344555 999999 99999999998 8899995544 3444322 2334 378888886543 45678999999
Q ss_pred EcccccccCC----------------chhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEE
Q 047630 304 SMHVLSNWIP----------------TTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 304 s~~~l~~~~~----------------~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
++..+++..+ ......+++++.++|||||++++..... ....+.+.+.+++.||+.....
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK--EKLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC--HHHHHHHHHHHHHTTCEEEEEE
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc--HhHHHHHHHHHHHcCCceEEEE
Confidence 9877654321 1223679999999999999998864322 1334558889999999766554
No 105
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.34 E-value=4.6e-12 Score=121.05 Aligned_cols=102 Identities=11% Similarity=0.099 Sum_probs=75.4
Q ss_pred ccEEEEEcCCc---chHHHHHHH--cCCEEEEEecCCCchhHHHHHhc----CCccEEEeccCcCC-----------CCC
Q 047630 237 IRIGLDIGGGV---ATFAVRMME--RNITIVTTSMNLNGPFNNFIASR----GVVPLYISISQRLP-----------FFD 296 (392)
Q Consensus 237 ir~VLDIGCGt---G~~a~~La~--~g~~vvg~~iD~~a~~~~~aa~r----g~i~~~~~d~~~Lp-----------f~d 296 (392)
++.|||||||+ |.++..+.+ .+..|+++|+| ..+.+.+.++ +.+.++.+|+.+.+ ++.
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~s--p~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDID--PMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESS--HHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECC--hHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 45569999999 998877766 35788885543 3444433322 35788999876521 223
Q ss_pred CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc
Q 047630 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~ 341 (392)
.+||+|++..++|++.+. ....+|++++|+|||||+|++.++..
T Consensus 156 ~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 589999999999886543 56789999999999999999998764
No 106
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.34 E-value=3.8e-12 Score=116.00 Aligned_cols=129 Identities=14% Similarity=0.184 Sum_probs=89.3
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHH----HH----hcC--CccEEEeccCcCCCCCCc
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNF----IA----SRG--VVPLYISISQRLPFFDNT 298 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~----aa----~rg--~i~~~~~d~~~Lpf~d~s 298 (392)
..++.+| ||||||+|.++..+++. +..++|+| ++..+.+. +. ..+ .+.++++|+..+|+.+++
T Consensus 25 ~~~~~~v---LDiGcG~G~~~~~la~~~p~~~v~gvD--~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 99 (218)
T 3mq2_A 25 SQYDDVV---LDVGTGDGKHPYKVARQNPSRLVVALD--ADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV 99 (218)
T ss_dssp TTSSEEE---EEESCTTCHHHHHHHHHCTTEEEEEEE--SCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE
T ss_pred ccCCCEE---EEecCCCCHHHHHHHHHCCCCEEEEEE--CCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC
Confidence 4444455 99999999999999997 67788855 43443332 11 123 368899999999998887
Q ss_pred ccEEEEccccc-----ccCCchhHHHHHHHHHHcccCCcEEEEEeeccc---------------ccchHHHHHHHHHHcC
Q 047630 299 LDIVHSMHVLS-----NWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV---------------GAQLEDVYVPLIESVG 358 (392)
Q Consensus 299 FDlV~s~~~l~-----~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~---------------~~~l~~~l~~ll~~aG 358 (392)
|.|+...... |+.++ ..+++++.|+|||||.|++...... .....+.+.++++++|
T Consensus 100 -d~v~~~~~~~~~~~~~~~~~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 175 (218)
T 3mq2_A 100 -GELHVLMPWGSLLRGVLGSS---PEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAG 175 (218)
T ss_dssp -EEEEEESCCHHHHHHHHTSS---SHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTT
T ss_pred -CEEEEEccchhhhhhhhccH---HHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcC
Confidence 8887443221 22222 4699999999999999998642111 0112445888999999
Q ss_pred CeEEEEEEee
Q 047630 359 FNKLKWVVGR 368 (392)
Q Consensus 359 f~~i~w~~~~ 368 (392)
|++.......
T Consensus 176 f~i~~~~~~~ 185 (218)
T 3mq2_A 176 WKLADCRYLE 185 (218)
T ss_dssp EEEEEEEEEC
T ss_pred CCceeeeccc
Confidence 9998877654
No 107
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.33 E-value=1.2e-11 Score=114.20 Aligned_cols=119 Identities=11% Similarity=0.116 Sum_probs=83.1
Q ss_pred EEEEEcCCcchHHHHHHHc-C-CEEEEEecCCCchhHHHHHh----cCCccEEEeccCc----CCCCCCcccEEEEcccc
Q 047630 239 IGLDIGGGVATFAVRMMER-N-ITIVTTSMNLNGPFNNFIAS----RGVVPLYISISQR----LPFFDNTLDIVHSMHVL 308 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-g-~~vvg~~iD~~a~~~~~aa~----rg~i~~~~~d~~~----Lpf~d~sFDlV~s~~~l 308 (392)
.|||+|||+|.++..+++. + ..|+++| ++..+.+.+.+ ...+.++.+|+.. +++. ++||+|+
T Consensus 77 ~VLDlGcG~G~~~~~la~~~~~~~v~gvD--~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~----- 148 (230)
T 1fbn_A 77 KILYLGASAGTTPSHVADIADKGIVYAIE--YAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIY----- 148 (230)
T ss_dssp EEEEESCCSSHHHHHHHHHTTTSEEEEEE--SCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEE-----
T ss_pred EEEEEcccCCHHHHHHHHHcCCcEEEEEE--CCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEE-----
Confidence 3499999999999999986 3 6788855 53444433322 2346788888887 7776 7899999
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEEEEEeeccc--cc-----c-hHHHHHHHHHHcCCeEEEEEEe
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV--GA-----Q-LEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~--~~-----~-l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
+++..+...+.+++++.++|||||++++. +... .. . ..+++. +++++||+.++....
T Consensus 149 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~ 213 (230)
T 1fbn_A 149 EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDI 213 (230)
T ss_dssp ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEEC
T ss_pred EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEcc
Confidence 23334444467899999999999999987 3211 11 1 235566 889999998876643
No 108
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.33 E-value=1.1e-11 Score=108.61 Aligned_cols=117 Identities=16% Similarity=0.174 Sum_probs=83.2
Q ss_pred EEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh----cC---CccEEEecc-CcCCCCCCcccEEEEcccc
Q 047630 239 IGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS----RG---VVPLYISIS-QRLPFFDNTLDIVHSMHVL 308 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~-~~Lpf~d~sFDlV~s~~~l 308 (392)
.|||+|||+|.++..+++. +..+++ +|++....+.+.+ .+ .+ ++.++. +.++..+++||+|++..++
T Consensus 28 ~vldiG~G~G~~~~~l~~~~~~~~v~~--vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 28 TLWDIGGGSGSIAIEWLRSTPQTTAVC--FEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp EEEEESTTTTHHHHHHHTTSSSEEEEE--ECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC-T
T ss_pred eEEEeCCCCCHHHHHHHHHCCCCeEEE--EeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECCcc
Confidence 3499999999999999986 567777 5564444443332 23 24 666665 3444434899999999988
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEee
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
++ ..+++++.++|||||++++..+... ....+.+.+++.|++..+.....
T Consensus 105 ~~-------~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 154 (178)
T 3hm2_A 105 TA-------PGVFAAAWKRLPVGGRLVANAVTVE---SEQMLWALRKQFGGTISSFAISH 154 (178)
T ss_dssp TC-------TTHHHHHHHTCCTTCEEEEEECSHH---HHHHHHHHHHHHCCEEEEEEEEE
T ss_pred cH-------HHHHHHHHHhcCCCCEEEEEeeccc---cHHHHHHHHHHcCCeeEEEEeec
Confidence 66 2589999999999999998875432 23347778889998887766554
No 109
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.33 E-value=2.3e-11 Score=117.49 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=88.9
Q ss_pred EEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhcC-CccEE-EeccCcCC---CCCCcccEEEEcccccccC
Q 047630 239 IGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASRG-VVPLY-ISISQRLP---FFDNTLDIVHSMHVLSNWI 312 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~rg-~i~~~-~~d~~~Lp---f~d~sFDlV~s~~~l~~~~ 312 (392)
+|||+|||||.++..+++.+. .|+++|++ ..+.+.+.++. .+... ..++..++ ++..+||+|++..+++++
T Consensus 88 ~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs--~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl- 164 (291)
T 3hp7_A 88 ITIDIGASTGGFTDVMLQNGAKLVYAVDVG--TNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL- 164 (291)
T ss_dssp EEEEETCTTSHHHHHHHHTTCSEEEEECSS--SSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG-
T ss_pred EEEecCCCccHHHHHHHhCCCCEEEEEECC--HHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhhH-
Confidence 459999999999999999875 89995544 44444433322 11111 22333333 244569999998887654
Q ss_pred CchhHHHHHHHHHHcccCCcEEEEE---eeccccc---------------chHHHHHHHHHHcCCeEEEEEEeeccCCCC
Q 047630 313 PTTLLHFLMFDIYRVLRPGGLFWLD---HFFCVGA---------------QLEDVYVPLIESVGFNKLKWVVGRKLDRGP 374 (392)
Q Consensus 313 ~~~~l~~~L~el~RvLKPGG~lii~---~~~~~~~---------------~l~~~l~~ll~~aGf~~i~w~~~~k~d~~~ 374 (392)
..+|.+++|+|||||.|++. .|-...+ ...+.+.++++++||....+..... .|.
T Consensus 165 -----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi--~g~ 237 (291)
T 3hp7_A 165 -----NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPI--QGG 237 (291)
T ss_dssp -----GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSS--CCG
T ss_pred -----HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC--CCC
Confidence 35899999999999999886 2211111 1255688889999999888765432 233
Q ss_pred cccceeeEEEEEc
Q 047630 375 ELREMYLSALLEK 387 (392)
Q Consensus 375 ~~~e~ylsai~~K 387 (392)
+.+.-|+ ..++|
T Consensus 238 ~gn~e~l-~~~~~ 249 (291)
T 3hp7_A 238 HGNIEFL-AHLEK 249 (291)
T ss_dssp GGCCCEE-EEEEE
T ss_pred CcCHHHH-HHhhh
Confidence 3444454 34455
No 110
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.32 E-value=5.9e-12 Score=111.00 Aligned_cols=119 Identities=15% Similarity=0.174 Sum_probs=84.5
Q ss_pred HHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cC---CccEEEeccCcCCCCC-Ccc
Q 047630 228 VLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQRLPFFD-NTL 299 (392)
Q Consensus 228 ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~Lpf~d-~sF 299 (392)
.+.+.++.+| ||+|||+|.++..+++.+..++++| ++....+.+.+ .+ .+.+..+|... ++++ ++|
T Consensus 28 ~~~~~~~~~v---ldiG~G~G~~~~~l~~~~~~v~~~D--~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~ 101 (192)
T 1l3i_A 28 LAEPGKNDVA---VDVGCGTGGVTLELAGRVRRVYAID--RNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDI 101 (192)
T ss_dssp HHCCCTTCEE---EEESCTTSHHHHHHHTTSSEEEEEE--SCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCE
T ss_pred hcCCCCCCEE---EEECCCCCHHHHHHHHhcCEEEEEE--CCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCC
Confidence 3344455555 9999999999999999888888855 43344443332 22 36777787665 3333 589
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeE
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNK 361 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~ 361 (392)
|+|++..+++++ ..+++++.++|+|||.+++..... .....+.+.+++.||..
T Consensus 102 D~v~~~~~~~~~------~~~l~~~~~~l~~gG~l~~~~~~~---~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 102 DIAVVGGSGGEL------QEILRIIKDKLKPGGRIIVTAILL---ETKFEAMECLRDLGFDV 154 (192)
T ss_dssp EEEEESCCTTCH------HHHHHHHHHTEEEEEEEEEEECBH---HHHHHHHHHHHHTTCCC
T ss_pred CEEEECCchHHH------HHHHHHHHHhcCCCcEEEEEecCc---chHHHHHHHHHHCCCce
Confidence 999998876543 579999999999999999886532 22345778899999943
No 111
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.32 E-value=2.3e-11 Score=111.62 Aligned_cols=124 Identities=12% Similarity=0.086 Sum_probs=80.2
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhH----HHHHhcCCccEEEeccCcC----CCCCCcccE
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFN----NFIASRGVVPLYISISQRL----PFFDNTLDI 301 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~----~~aa~rg~i~~~~~d~~~L----pf~d~sFDl 301 (392)
.++.+| ||+|||+|.++..+++.. ..|+| +|++..+. +.+.++..+.++++|.... ++. ++||+
T Consensus 56 ~~g~~V---LDlGcGtG~~~~~la~~~~~~~V~g--vD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~ 129 (210)
T 1nt2_A 56 RGDERV---LYLGAASGTTVSHLADIVDEGIIYA--VEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDL 129 (210)
T ss_dssp CSSCEE---EEETCTTSHHHHHHHHHTTTSEEEE--ECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEE
T ss_pred CCCCEE---EEECCcCCHHHHHHHHHcCCCEEEE--EECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeE
Confidence 344455 999999999999998853 57888 55544322 2333344467777877653 444 78999
Q ss_pred EEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc---cccchHHHH---HHHHHHcCCeEEEEEEe
Q 047630 302 VHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC---VGAQLEDVY---VPLIESVGFNKLKWVVG 367 (392)
Q Consensus 302 V~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~---~~~~l~~~l---~~ll~~aGf~~i~w~~~ 367 (392)
|++.. . .+.....++++++|+|||||+|++..... ......+.+ .+.++++ |+.++....
T Consensus 130 V~~~~-~----~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 130 IYQDI-A----QKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSL 195 (210)
T ss_dssp EEECC-C----STTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred EEEec-c----ChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecC
Confidence 99873 1 22344457999999999999999884221 111112222 2237777 998876643
No 112
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.32 E-value=1.5e-11 Score=108.61 Aligned_cols=117 Identities=13% Similarity=0.164 Sum_probs=83.5
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cC--C--ccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RG--V--VPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg--~--i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
.|||+|||+|.++..+++.+..++++|++ ....+.+.+ .+ . +.++.+|... ++.+++||+|++...+++
T Consensus 55 ~vLdiG~G~G~~~~~~~~~~~~v~~~D~~--~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~~ 131 (194)
T 1dus_A 55 DILDLGCGYGVIGIALADEVKSTTMADIN--RRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIRA 131 (194)
T ss_dssp EEEEETCTTSHHHHHHGGGSSEEEEEESC--HHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCCSTT
T ss_pred eEEEeCCCCCHHHHHHHHcCCeEEEEECC--HHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECCCccc
Confidence 34999999999999999988899985544 344433222 23 1 6788888776 445778999999887764
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEE
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
.......+++++.++|||||.+++....... ...+.+.+++. |..+++
T Consensus 132 --~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~---~~~~~~~l~~~-~~~~~~ 179 (194)
T 1dus_A 132 --GKEVLHRIIEEGKELLKDNGEIWVVIQTKQG---AKSLAKYMKDV-FGNVET 179 (194)
T ss_dssp --CHHHHHHHHHHHHHHEEEEEEEEEEEESTHH---HHHHHHHHHHH-HSCCEE
T ss_pred --chhHHHHHHHHHHHHcCCCCEEEEEECCCCC---hHHHHHHHHHH-hcceEE
Confidence 2355678999999999999999998765432 22355566665 544443
No 113
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.32 E-value=8.3e-12 Score=111.81 Aligned_cols=134 Identities=10% Similarity=0.047 Sum_probs=90.5
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHH----hcC---CccEEEeccCcCC-CCCCcc
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQRLP-FFDNTL 299 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~~Lp-f~d~sF 299 (392)
+.++.+| ||+|||+|.++..+++. +..+++ +|++....+.+. +.+ .+.++++|+..++ +.+++|
T Consensus 20 ~~~~~~v---LDlGcG~G~~~~~l~~~~~~~~~v~~--vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~f 94 (197)
T 3eey_A 20 VKEGDTV---VDATCGNGNDTAFLASLVGENGRVFG--FDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPV 94 (197)
T ss_dssp CCTTCEE---EESCCTTSHHHHHHHHHHCTTCEEEE--ECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCE
T ss_pred CCCCCEE---EEcCCCCCHHHHHHHHHhCCCCEEEE--EECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCc
Confidence 4455555 99999999999999985 247888 555444444332 222 3788899988876 667899
Q ss_pred cEEEEcccccc------cCCchhHHHHHHHHHHcccCCcEEEEEeeccccc--chHHHHHHHH---HHcCCeEEEEEEee
Q 047630 300 DIVHSMHVLSN------WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA--QLEDVYVPLI---ESVGFNKLKWVVGR 368 (392)
Q Consensus 300 DlV~s~~~l~~------~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~--~l~~~l~~ll---~~aGf~~i~w~~~~ 368 (392)
|+|++...+.. .........+++++.++|||||++++..+..... ...+.+.+.+ ...+|..+++....
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~ 174 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFIN 174 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETT
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEecc
Confidence 99999876521 1122345579999999999999999987654221 1123344444 34568888887664
Q ss_pred c
Q 047630 369 K 369 (392)
Q Consensus 369 k 369 (392)
+
T Consensus 175 ~ 175 (197)
T 3eey_A 175 Q 175 (197)
T ss_dssp C
T ss_pred C
Confidence 4
No 114
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.31 E-value=2.8e-11 Score=113.85 Aligned_cols=136 Identities=11% Similarity=0.068 Sum_probs=92.5
Q ss_pred HHHHHHhhC-CCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHH----hcC---CccEEEeccCcCC-
Q 047630 224 SIDEVLATK-KPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQRLP- 293 (392)
Q Consensus 224 lI~~ll~l~-~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~~Lp- 293 (392)
++...+.+. ++.+| ||+|||+|.++..+++++. .+++ +|++....+.+. ..+ .+.++.+|+..++
T Consensus 39 ll~~~~~~~~~~~~v---LDlG~G~G~~~~~la~~~~~~v~g--vDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~ 113 (259)
T 3lpm_A 39 LLAKFSYLPIRKGKI---IDLCSGNGIIPLLLSTRTKAKIVG--VEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITD 113 (259)
T ss_dssp HHHHHCCCCSSCCEE---EETTCTTTHHHHHHHTTCCCEEEE--ECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGG
T ss_pred HHHHHhcCCCCCCEE---EEcCCchhHHHHHHHHhcCCcEEE--EECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhh
Confidence 344444444 44555 9999999999999999766 7888 555444443322 223 3688889988775
Q ss_pred -CCCCcccEEEEccccccc-----------------CCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHH
Q 047630 294 -FFDNTLDIVHSMHVLSNW-----------------IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIE 355 (392)
Q Consensus 294 -f~d~sFDlV~s~~~l~~~-----------------~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~ 355 (392)
+++++||+|+++..+... .....++.+++++.++|||||+|++.... +. ..++...++
T Consensus 114 ~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~-~~~~~~~l~ 189 (259)
T 3lpm_A 114 LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP---ER-LLDIIDIMR 189 (259)
T ss_dssp TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT---TT-HHHHHHHHH
T ss_pred hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH---HH-HHHHHHHHH
Confidence 457899999997554322 01134567999999999999999985322 22 334777888
Q ss_pred HcCCeEEEEEEee
Q 047630 356 SVGFNKLKWVVGR 368 (392)
Q Consensus 356 ~aGf~~i~w~~~~ 368 (392)
+.||...+...+.
T Consensus 190 ~~~~~~~~~~~v~ 202 (259)
T 3lpm_A 190 KYRLEPKRIQFVH 202 (259)
T ss_dssp HTTEEEEEEEEEE
T ss_pred HCCCceEEEEEee
Confidence 9999887766553
No 115
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.31 E-value=1.1e-11 Score=113.58 Aligned_cols=119 Identities=14% Similarity=0.128 Sum_probs=84.0
Q ss_pred EEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh----cC--CccEEEeccCcCC--CCCCcccEEEEccccc
Q 047630 240 GLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRLP--FFDNTLDIVHSMHVLS 309 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~Lp--f~d~sFDlV~s~~~l~ 309 (392)
|||||||+|.++..+++. +..++| +|++......+.+ .+ .+.++.+|+..++ +++++||.|++.+...
T Consensus 42 vLDiGcG~G~~~~~la~~~p~~~v~g--iD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~p 119 (213)
T 2fca_A 42 HIEVGTGKGQFISGMAKQNPDINYIG--IELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSDP 119 (213)
T ss_dssp EEEECCTTSHHHHHHHHHCTTSEEEE--ECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCCC
T ss_pred EEEEecCCCHHHHHHHHHCCCCCEEE--EEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECCCC
Confidence 499999999999999986 567888 5564455443332 33 3688889988876 7788999998865432
Q ss_pred ccCCc------hhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEE
Q 047630 310 NWIPT------TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 310 ~~~~~------~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
|... .....+++++.++|||||.|++... .....+...+.+++.||.....
T Consensus 120 -~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td---~~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 120 -WPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD---NRGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp -CCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES---CHHHHHHHHHHHHHHTCEEEEE
T ss_pred -CcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC---CHHHHHHHHHHHHHCCCccccc
Confidence 2111 0125689999999999999988752 2233344667788889987653
No 116
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.31 E-value=1.3e-11 Score=114.01 Aligned_cols=121 Identities=12% Similarity=0.102 Sum_probs=83.7
Q ss_pred EEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchh----HHHHHhcCCccEEEeccCc---CCCCCCcccEEEEcccc
Q 047630 239 IGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPF----NNFIASRGVVPLYISISQR---LPFFDNTLDIVHSMHVL 308 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~----~~~aa~rg~i~~~~~d~~~---Lpf~d~sFDlV~s~~~l 308 (392)
+|||+|||+|.++..+++. +..+++ +|++..+ .+.+.++..+.++.+|+.. +++.+++||+|++...
T Consensus 80 ~vLDlG~G~G~~~~~la~~~g~~~~v~g--vD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~- 156 (233)
T 2ipx_A 80 KVLYLGAASGTTVSHVSDIVGPDGLVYA--VEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA- 156 (233)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTCEEEE--ECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC-
T ss_pred EEEEEcccCCHHHHHHHHHhCCCcEEEE--EECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC-
Confidence 3499999999999999985 367888 5554332 2233343457888898876 5666789999999554
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEEEEEeeccc---ccc----hHHHHHHHHHHcCCeEEEEEEe
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV---GAQ----LEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~---~~~----l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
.......++.++.++|||||++++...... ... ..++ .++++++||+.++....
T Consensus 157 ----~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~~~~~~~ 217 (233)
T 2ipx_A 157 ----QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE-VKKMQQENMKPQEQLTL 217 (233)
T ss_dssp ----CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEEEEEEEC
T ss_pred ----CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH-HHHHHHCCCceEEEEec
Confidence 223434678999999999999999643211 001 2222 57788999999886543
No 117
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.30 E-value=7.7e-12 Score=110.32 Aligned_cols=107 Identities=13% Similarity=0.130 Sum_probs=79.1
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcC--CccEEEeccCcCCC---CCCcccEEEEc
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRG--VVPLYISISQRLPF---FDNTLDIVHSM 305 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg--~i~~~~~d~~~Lpf---~d~sFDlV~s~ 305 (392)
+.++.++ ||+|||. ++ +|++..+.+.+.++. .+.+.++|++.+++ ++++||+|++.
T Consensus 10 ~~~g~~v---L~~~~g~--------------v~--vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~ 70 (176)
T 2ld4_A 10 ISAGQFV---AVVWDKS--------------SP--VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSG 70 (176)
T ss_dssp CCTTSEE---EEEECTT--------------SC--HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEEC
T ss_pred CCCCCEE---EEecCCc--------------ee--eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEEC
Confidence 4455666 9999996 12 555344444444432 37899999999987 78999999999
Q ss_pred cccccc-CCchhHHHHHHHHHHcccCCcEEEEEeeccccc------chHHHHHHHHHHcCC
Q 047630 306 HVLSNW-IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA------QLEDVYVPLIESVGF 359 (392)
Q Consensus 306 ~~l~~~-~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~------~l~~~l~~ll~~aGf 359 (392)
.++||+ .+. ..++++++|+|||||+|++.+...... ...+++.++++++||
T Consensus 71 ~~l~~~~~~~---~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 71 LVPGSTTLHS---AEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CSTTCCCCCC---HHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred ChhhhcccCH---HHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 999886 333 469999999999999999976432211 114679999999999
No 118
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.30 E-value=1.3e-11 Score=117.47 Aligned_cols=104 Identities=10% Similarity=0.076 Sum_probs=76.0
Q ss_pred hhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCC-----CCCcccEEEE
Q 047630 230 ATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPF-----FDNTLDIVHS 304 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf-----~d~sFDlV~s 304 (392)
.+.++.+| ||||||+|.++..+++++..|+++| ++..+.+.+.++-...++..+...++. .+++||+|++
T Consensus 42 ~l~~g~~V---LDlGcGtG~~a~~La~~g~~V~gvD--~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~ 116 (261)
T 3iv6_A 42 NIVPGSTV---AVIGASTRFLIEKALERGASVTVFD--FSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLN 116 (261)
T ss_dssp TCCTTCEE---EEECTTCHHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEE
T ss_pred CCCCcCEE---EEEeCcchHHHHHHHhcCCEEEEEE--CCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEE
Confidence 34455555 9999999999999999999999954 544555555444211233444444433 2578999999
Q ss_pred cccccccCCchhHHHHHHHHHHcccCCcEEEEEeec
Q 047630 305 MHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 305 ~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~ 340 (392)
..+++|+ ..++...+++++.++| |||+++++...
T Consensus 117 ~~~l~~~-~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 117 DRLINRF-TTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp ESCGGGS-CHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hhhhHhC-CHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 9999886 4456678999999999 99999988644
No 119
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.29 E-value=7.6e-12 Score=123.05 Aligned_cols=122 Identities=15% Similarity=0.135 Sum_probs=90.5
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCch
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTT 315 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~ 315 (392)
..|||||||+|.++..+++. +.++++ +|+ ....+.+.+...+.+..+|+.. ++++ ||+|++..++|+|.+ .
T Consensus 190 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~--~D~-~~~~~~a~~~~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d-~ 262 (352)
T 1fp2_A 190 ESIVDVGGGTGTTAKIICETFPKLKCIV--FDR-PQVVENLSGSNNLTYVGGDMFT-SIPN--ADAVLLKYILHNWTD-K 262 (352)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEE--EEC-HHHHTTCCCBTTEEEEECCTTT-CCCC--CSEEEEESCGGGSCH-H
T ss_pred ceEEEeCCCccHHHHHHHHHCCCCeEEE--eeC-HHHHhhcccCCCcEEEeccccC-CCCC--ccEEEeehhhccCCH-H
Confidence 34599999999999999985 456777 555 4333333333347888998865 5553 999999999999743 3
Q ss_pred hHHHHHHHHHHcccC---CcEEEEEeeccccc------------------------chHHHHHHHHHHcCCeEEEEEE
Q 047630 316 LLHFLMFDIYRVLRP---GGLFWLDHFFCVGA------------------------QLEDVYVPLIESVGFNKLKWVV 366 (392)
Q Consensus 316 ~l~~~L~el~RvLKP---GG~lii~~~~~~~~------------------------~l~~~l~~ll~~aGf~~i~w~~ 366 (392)
....+|++++|+||| ||++++.++..... ...++|.++++++||+.++...
T Consensus 263 ~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 263 DCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISP 340 (352)
T ss_dssp HHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEEe
Confidence 445899999999999 99998887542211 1146799999999999988764
No 120
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.29 E-value=5e-11 Score=128.20 Aligned_cols=101 Identities=14% Similarity=0.149 Sum_probs=79.3
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHcC---CEEEEEecCCCchhHHHHHh----------cC--CccEEEeccCcCCCC
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMERN---ITIVTTSMNLNGPFNNFIAS----------RG--VVPLYISISQRLPFF 295 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~g---~~vvg~~iD~~a~~~~~aa~----------rg--~i~~~~~d~~~Lpf~ 295 (392)
..++.+| ||||||+|.++..|++.+ ..|+|+| ++..+.+.+.+ .+ .+.++++|+..+++.
T Consensus 719 ~~~g~rV---LDVGCGTG~lai~LAr~g~p~a~VtGVD--IS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~ 793 (950)
T 3htx_A 719 ESSASTL---VDFGCGSGSLLDSLLDYPTSLQTIIGVD--ISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSR 793 (950)
T ss_dssp HSCCSEE---EEETCSSSHHHHHHTSSCCCCCEEEEEE--SCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTT
T ss_pred ccCCCEE---EEECCCCCHHHHHHHHhCCCCCeEEEEE--CCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcc
Confidence 3345555 999999999999999987 6888855 53444444433 12 378999999999999
Q ss_pred CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 296 d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+++||+|++..+++|+ ++.....+++++.|+|||| .+++..
T Consensus 794 d~sFDlVV~~eVLeHL-~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 794 LHDVDIGTCLEVIEHM-EEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp SCSCCEEEEESCGGGS-CHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred cCCeeEEEEeCchhhC-ChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 9999999999999996 4455567999999999999 776665
No 121
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.28 E-value=1.7e-11 Score=114.82 Aligned_cols=127 Identities=13% Similarity=0.037 Sum_probs=87.0
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc-CC--EEEEEecCCCchhHHHHH----hcCCccEEEeccC---cCCCCCCccc
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER-NI--TIVTTSMNLNGPFNNFIA----SRGVVPLYISISQ---RLPFFDNTLD 300 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~-g~--~vvg~~iD~~a~~~~~aa----~rg~i~~~~~d~~---~Lpf~d~sFD 300 (392)
+.++.+| ||+|||+|.++..+++. |. .|++ +|++..+.+.+. +++.+..+.++.. ..++..+++|
T Consensus 75 ikpG~~V---ldlG~G~G~~~~~la~~VG~~G~V~a--vD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 75 VKEGDRI---LYLGIASGTTASHMSDIIGPRGRIYG--VEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CCTTCEE---EEETCTTSHHHHHHHHHHCTTCEEEE--EECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEE
T ss_pred CCCCCEE---EEecCcCCHHHHHHHHHhCCCceEEE--EeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEE
Confidence 5677777 99999999999999983 44 5777 556445554332 2344666777644 4567788999
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc------cccchHHHHHHHHHHcCCeEEEEEEe
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC------VGAQLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~------~~~~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
+|++.... + ++.+.++.+++|+|||||++++..... ......+...+.++++||+.++....
T Consensus 150 vVf~d~~~-~----~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L 217 (233)
T 4df3_A 150 GLYADVAQ-P----EQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHL 217 (233)
T ss_dssp EEEECCCC-T----THHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEeccC-C----hhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 99875432 2 345679999999999999998875322 11222333556788999999876543
No 122
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.27 E-value=4e-11 Score=104.96 Aligned_cols=118 Identities=9% Similarity=0.028 Sum_probs=85.2
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cC--CccEEEeccCcCCCCCCcccEE
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRLPFFDNTLDIV 302 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~Lpf~d~sFDlV 302 (392)
+...++.++ ||+|||+|.++..+++.+..++++|++ ....+.+.+ .+ .+.++.+|... ++++++||+|
T Consensus 31 ~~~~~~~~v---LdiG~G~G~~~~~l~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i 104 (183)
T 2yxd_A 31 LNLNKDDVV---VDVGCGSGGMTVEIAKRCKFVYAIDYL--DGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKA 104 (183)
T ss_dssp HCCCTTCEE---EEESCCCSHHHHHHHTTSSEEEEEECS--HHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEE
T ss_pred cCCCCCCEE---EEeCCCCCHHHHHHHhcCCeEEEEeCC--HHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEE
Confidence 334444455 999999999999999988889995544 344443332 23 36788888776 6677899999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEE
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
++..+ .....+++++.++ |||.+++..... +. ...+.+.+++.||+....
T Consensus 105 ~~~~~-------~~~~~~l~~~~~~--~gG~l~~~~~~~--~~-~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 105 FIGGT-------KNIEKIIEILDKK--KINHIVANTIVL--EN-AAKIINEFESRGYNVDAV 154 (183)
T ss_dssp EECSC-------SCHHHHHHHHHHT--TCCEEEEEESCH--HH-HHHHHHHHHHTTCEEEEE
T ss_pred EECCc-------ccHHHHHHHHhhC--CCCEEEEEeccc--cc-HHHHHHHHHHcCCeEEEE
Confidence 99887 2345789999999 999999987432 22 344788899999866544
No 123
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.26 E-value=1.1e-11 Score=122.20 Aligned_cols=121 Identities=13% Similarity=0.115 Sum_probs=89.3
Q ss_pred EEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchh
Q 047630 239 IGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTL 316 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~ 316 (392)
.|||||||+|.++..+++.. ..+++ +|+ +...+.+.+...+.++.+|... +++ .||+|++..++|+|.+ ..
T Consensus 196 ~vlDvG~G~G~~~~~l~~~~p~~~~~~--~D~-~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d-~~ 268 (358)
T 1zg3_A 196 SLVDVGGGTGGVTKLIHEIFPHLKCTV--FDQ-PQVVGNLTGNENLNFVGGDMFK-SIP--SADAVLLKWVLHDWND-EQ 268 (358)
T ss_dssp EEEEETCTTSHHHHHHHHHCTTSEEEE--EEC-HHHHSSCCCCSSEEEEECCTTT-CCC--CCSEEEEESCGGGSCH-HH
T ss_pred EEEEECCCcCHHHHHHHHHCCCCeEEE--ecc-HHHHhhcccCCCcEEEeCccCC-CCC--CceEEEEcccccCCCH-HH
Confidence 45999999999999999964 45655 555 3333222222237888888876 665 4999999999999743 34
Q ss_pred HHHHHHHHHHcccC---CcEEEEEeeccccc-------------------------chHHHHHHHHHHcCCeEEEEEE
Q 047630 317 LHFLMFDIYRVLRP---GGLFWLDHFFCVGA-------------------------QLEDVYVPLIESVGFNKLKWVV 366 (392)
Q Consensus 317 l~~~L~el~RvLKP---GG~lii~~~~~~~~-------------------------~l~~~l~~ll~~aGf~~i~w~~ 366 (392)
...+|++++++||| ||++++.++..... ...++|.++++++||+.++...
T Consensus 269 ~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 269 SLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITP 346 (358)
T ss_dssp HHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEe
Confidence 45899999999999 99998877542210 0256799999999999988764
No 124
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.26 E-value=2.6e-11 Score=121.32 Aligned_cols=113 Identities=14% Similarity=0.144 Sum_probs=84.5
Q ss_pred HHHHHHHHHhhC-----CCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHH----HhcC-CccEEEeccC
Q 047630 221 LDFSIDEVLATK-----KPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFI----ASRG-VVPLYISISQ 290 (392)
Q Consensus 221 ~~~lI~~ll~l~-----~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~a----a~rg-~i~~~~~d~~ 290 (392)
.+.+++.+.... ++.+| ||+|||+|.++..+++.+..++++|+|. ...+.+ ...+ .+.++.+|+.
T Consensus 216 t~~ll~~l~~~l~~~~~~~~~V---LDlGcG~G~~~~~la~~g~~V~gvDis~--~al~~A~~n~~~~~~~v~~~~~D~~ 290 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVRGRQV---LDLGAGYGALTLPLARMGAEVVGVEDDL--ASVLSLQKGLEANALKAQALHSDVD 290 (381)
T ss_dssp HHHHHHHHHHHHCTTTTTTCEE---EEETCTTSTTHHHHHHTTCEEEEEESBH--HHHHHHHHHHHHTTCCCEEEECSTT
T ss_pred HHHHHHHHHHhhcccCCCCCEE---EEEeeeCCHHHHHHHHcCCEEEEEECCH--HHHHHHHHHHHHcCCCeEEEEcchh
Confidence 455666554432 33445 9999999999999999999999966543 333322 2233 2688999999
Q ss_pred cCCCCCCcccEEEEcccccccC--CchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 291 RLPFFDNTLDIVHSMHVLSNWI--PTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 291 ~Lpf~d~sFDlV~s~~~l~~~~--~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
..+..+++||+|+++..+++.. .......+++++.++|||||++++..
T Consensus 291 ~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 291 EALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp TTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 8887778999999998887621 23566789999999999999999875
No 125
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.25 E-value=3.4e-11 Score=112.68 Aligned_cols=128 Identities=10% Similarity=0.033 Sum_probs=83.3
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhH----HHHHhcCCccEEEeccCcCC---CCCCccc
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFN----NFIASRGVVPLYISISQRLP---FFDNTLD 300 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~----~~aa~rg~i~~~~~d~~~Lp---f~d~sFD 300 (392)
+.++.+| ||+|||+|.++..+++. .-.|+++| ++..+. +.+.++..+.++++|+.... ...++||
T Consensus 74 l~~g~~V---LDlG~GtG~~t~~la~~v~~~G~V~avD--~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 74 IRKGTKV---LYLGAASGTTISHVSDIIELNGKAYGVE--FSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CCTTCEE---EEETCTTSHHHHHHHHHHTTTSEEEEEE--CCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEE
T ss_pred CCCCCEE---EEEeecCCHHHHHHHHHhCCCCEEEEEE--CcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceE
Confidence 4455555 99999999999999884 34788855 533332 23444455788889876542 1246899
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec-c-----cccchHHHHHHHHHHcCCeEEEEEEee
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF-C-----VGAQLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~-~-----~~~~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
+|++..+. +...+.++..+.++|||||+|++.... + ..++..+...+.+++.||+.++-....
T Consensus 149 ~I~~d~a~-----~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~ 217 (232)
T 3id6_C 149 VLYVDIAQ-----PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLD 217 (232)
T ss_dssp EEEECCCC-----TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECT
T ss_pred EEEecCCC-----hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 99987553 223334556677799999999887321 1 112222345567788899998866443
No 126
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.25 E-value=3.8e-11 Score=111.31 Aligned_cols=127 Identities=13% Similarity=0.127 Sum_probs=78.8
Q ss_pred EEEEcCCcchHHHHHHH--cCCEEEEEecCCCchhH-HHH---Hh----cC--CccEEEeccCcCCCC-CCcccEEEEcc
Q 047630 240 GLDIGGGVATFAVRMME--RNITIVTTSMNLNGPFN-NFI---AS----RG--VVPLYISISQRLPFF-DNTLDIVHSMH 306 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~--~g~~vvg~~iD~~a~~~-~~a---a~----rg--~i~~~~~d~~~Lpf~-d~sFDlV~s~~ 306 (392)
|||||||+|.++..+++ .+..|+| +|++.+.+ +.+ .+ .+ .+.+.+++++.+|.. .+.+|.|++++
T Consensus 28 vLDiGCG~G~~~~~la~~~~~~~v~G--vD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~~ 105 (225)
T 3p2e_A 28 HIDLGTGDGRNIYKLAINDQNTFYIG--IDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISILF 105 (225)
T ss_dssp EEEETCTTSHHHHHHHHTCTTEEEEE--ECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEEES
T ss_pred EEEEeccCcHHHHHHHHhCCCCEEEE--EeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEEeC
Confidence 49999999999999995 4566777 55543443 222 22 23 267888999888642 24455555544
Q ss_pred ccccc--CCchhHHHHHHHHHHcccCCcEEEEEeecccc---------------cch--HHHHHHHHHHcCCeEEEEEEe
Q 047630 307 VLSNW--IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG---------------AQL--EDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 307 ~l~~~--~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~---------------~~l--~~~l~~ll~~aGf~~i~w~~~ 367 (392)
...+. ........++++++|+|||||.|++....... ... .+++.++++++||++......
T Consensus 106 ~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~~~~ 185 (225)
T 3p2e_A 106 PWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDVKEL 185 (225)
T ss_dssp CCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEEEEE
T ss_pred CCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeeeeec
Confidence 32110 00001135899999999999999882211100 000 123888999999998887755
Q ss_pred e
Q 047630 368 R 368 (392)
Q Consensus 368 ~ 368 (392)
.
T Consensus 186 ~ 186 (225)
T 3p2e_A 186 D 186 (225)
T ss_dssp C
T ss_pred C
Confidence 4
No 127
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.24 E-value=2.5e-11 Score=109.82 Aligned_cols=141 Identities=16% Similarity=0.110 Sum_probs=92.5
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCC-------C----Cccc
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFF-------D----NTLD 300 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~-------d----~sFD 300 (392)
.++.+| ||+|||+|.++..+++++..|+|+|++...+ ...+.++++|+...+.. . ++||
T Consensus 24 ~~g~~V---LDlG~G~G~~s~~la~~~~~V~gvD~~~~~~-------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D 93 (191)
T 3dou_A 24 RKGDAV---IEIGSSPGGWTQVLNSLARKIISIDLQEMEE-------IAGVRFIRCDIFKETIFDDIDRALREEGIEKVD 93 (191)
T ss_dssp CTTCEE---EEESCTTCHHHHHHTTTCSEEEEEESSCCCC-------CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEE
T ss_pred CCCCEE---EEEeecCCHHHHHHHHcCCcEEEEecccccc-------CCCeEEEEccccCHHHHHHHHHHhhcccCCcce
Confidence 344455 9999999999999999988999977664211 12378999998876521 1 4899
Q ss_pred EEEEcccccccC--------CchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEeeccCC
Q 047630 301 IVHSMHVLSNWI--------PTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGRKLDR 372 (392)
Q Consensus 301 lV~s~~~l~~~~--------~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~ 372 (392)
+|++........ .....+.++.++.++|||||.|++..+.... ...+...++. .|..++...-...
T Consensus 94 ~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~---~~~~~~~l~~-~F~~v~~~kP~as-- 167 (191)
T 3dou_A 94 DVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM---TNDFIAIWRK-NFSSYKISKPPAS-- 167 (191)
T ss_dssp EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH---HHHHHHHHGG-GEEEEEEECC-----
T ss_pred EEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC---HHHHHHHHHH-hcCEEEEECCCCc--
Confidence 999975432110 0122357889999999999999988775543 2235556654 4888876532211
Q ss_pred CCcccceeeEEEEEcC
Q 047630 373 GPELREMYLSALLEKP 388 (392)
Q Consensus 373 ~~~~~e~ylsai~~Kp 388 (392)
.....|.|+.+.-.|.
T Consensus 168 R~~s~E~y~v~~~~~~ 183 (191)
T 3dou_A 168 RGSSSEIYIMFFGFKA 183 (191)
T ss_dssp ---CCEEEEEEEEECC
T ss_pred cCCCceEEEEEeeecc
Confidence 1256789986655554
No 128
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.24 E-value=2.2e-11 Score=117.44 Aligned_cols=99 Identities=17% Similarity=0.113 Sum_probs=76.0
Q ss_pred EEEEEcCCcchHHHHHHHc-CCEEEEEecCCCchhHHHHHhc-----------C--CccEEEeccCcCC----CC--CCc
Q 047630 239 IGLDIGGGVATFAVRMMER-NITIVTTSMNLNGPFNNFIASR-----------G--VVPLYISISQRLP----FF--DNT 298 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-g~~vvg~~iD~~a~~~~~aa~r-----------g--~i~~~~~d~~~Lp----f~--d~s 298 (392)
.|||+|||+|.++..+++. +..++++| ++..+.+.+.++ + .+.++++|...++ ++ +++
T Consensus 37 ~VLDlGcG~G~~~~~l~~~~~~~v~gvD--~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 114 (313)
T 3bgv_A 37 TVLDLGCGKGGDLLKWKKGRINKLVCTD--IADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMC 114 (313)
T ss_dssp EEEEETCTTTTTHHHHHHTTCSEEEEEE--SCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCC
T ss_pred EEEEECCCCcHHHHHHHhcCCCEEEEEe--CCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCC
Confidence 3499999999999999875 56888855 534444433222 1 3678899988876 53 459
Q ss_pred ccEEEEccccccc-CCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 299 LDIVHSMHVLSNW-IPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 299 FDlV~s~~~l~~~-~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
||+|++..++|+. .+..+...+++++.|+|||||+|++..+
T Consensus 115 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 115 FDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp EEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 9999999999775 4656777899999999999999988764
No 129
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.23 E-value=1.7e-11 Score=121.05 Aligned_cols=102 Identities=16% Similarity=0.260 Sum_probs=78.5
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHH----HHHhcC---CccEEEeccCcCCCCCCcccEE
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNN----FIASRG---VVPLYISISQRLPFFDNTLDIV 302 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~----~aa~rg---~i~~~~~d~~~Lpf~d~sFDlV 302 (392)
+.++.+| ||||||+|.++..+++.+. .|+|+|++ ++.. .+...+ .+.++.++++.+++++++||+|
T Consensus 64 ~~~~~~V---LDvGcG~G~~~~~la~~g~~~v~gvD~s---~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I 137 (349)
T 3q7e_A 64 LFKDKVV---LDVGSGTGILCMFAAKAGARKVIGIECS---SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDII 137 (349)
T ss_dssp HHTTCEE---EEESCTTSHHHHHHHHTTCSEEEEEECS---THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEE
T ss_pred cCCCCEE---EEEeccchHHHHHHHHCCCCEEEEECcH---HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEE
Confidence 3444555 9999999999999999876 89985554 3333 222333 2789999999999999999999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
++....+.+.....++.++.++.|+|||||+++...
T Consensus 138 is~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 138 ISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp EECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred EEccccccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 998765555455677789999999999999996443
No 130
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.23 E-value=3.3e-11 Score=118.56 Aligned_cols=100 Identities=12% Similarity=0.158 Sum_probs=75.7
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHH----HhcC---CccEEEeccCcCCCCCCcccEE
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFI----ASRG---VVPLYISISQRLPFFDNTLDIV 302 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~a----a~rg---~i~~~~~d~~~Lpf~d~sFDlV 302 (392)
+.++.+| ||||||+|.++..+++.+. .++++|++ ++.+.+ .+.+ .+.++.+++..+++++++||+|
T Consensus 62 ~~~~~~V---LDiGcGtG~ls~~la~~g~~~v~gvD~s---~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~I 135 (340)
T 2fyt_A 62 IFKDKVV---LDVGCGTGILSMFAAKAGAKKVLGVDQS---EILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVI 135 (340)
T ss_dssp GTTTCEE---EEETCTTSHHHHHHHHTTCSEEEEEESS---THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEE
T ss_pred hcCCCEE---EEeeccCcHHHHHHHHcCCCEEEEEChH---HHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEE
Confidence 4454545 9999999999999999875 88886654 233322 2222 4788999999999988999999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEE
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWL 336 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii 336 (392)
++....+.+.....++.++.++.|+|||||+++.
T Consensus 136 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 136 ISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred EEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 9987433333446677899999999999999973
No 131
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.23 E-value=6.8e-11 Score=112.90 Aligned_cols=119 Identities=12% Similarity=0.188 Sum_probs=87.3
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHH----HhcCC---ccEEEeccCcCCCCCCcccEEE
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFI----ASRGV---VPLYISISQRLPFFDNTLDIVH 303 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~a----a~rg~---i~~~~~d~~~Lpf~d~sFDlV~ 303 (392)
.++.++ ||+|||+|.++..+++.+. .|++ +|++....+.+ ..++. +.++++|+..++. +++||+|+
T Consensus 124 ~~~~~V---LDlgcG~G~~~~~la~~~~~~V~~--vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi 197 (278)
T 2frn_A 124 KPDELV---VDMFAGIGHLSLPIAVYGKAKVIA--IEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRIL 197 (278)
T ss_dssp CTTCEE---EETTCTTTTTHHHHHHHTCCEEEE--ECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEE
T ss_pred CCCCEE---EEecccCCHHHHHHHHhCCCEEEE--EECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEE
Confidence 345555 9999999999999999877 4888 55544444432 22332 6688999988876 78999999
Q ss_pred EcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc---ccchHHHHHHHHHHcCCeEEE
Q 047630 304 SMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV---GAQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 304 s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~---~~~l~~~l~~ll~~aGf~~i~ 363 (392)
+...... ..++.++.++|||||++++..+... ..+..+.+.+.++++||+...
T Consensus 198 ~~~p~~~-------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 198 MGYVVRT-------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ECCCSSG-------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ECCchhH-------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 8654221 3588999999999999999876532 234456688899999997654
No 132
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.23 E-value=3.3e-11 Score=120.14 Aligned_cols=96 Identities=14% Similarity=0.265 Sum_probs=75.2
Q ss_pred EEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHH----HHhcC---CccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNF----IASRG---VVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~----aa~rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
+|||||||+|.++..+++.+. .|+++|++ .+.+. +...+ .+.++.++++.++++ ++||+|++....+.
T Consensus 66 ~VLDlGcGtG~ls~~la~~g~~~V~gvD~s---~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~ 141 (376)
T 3r0q_C 66 TVLDVGTGSGILAIWSAQAGARKVYAVEAT---KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGYF 141 (376)
T ss_dssp EEEEESCTTTHHHHHHHHTTCSEEEEEESS---TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBTT
T ss_pred EEEEeccCcCHHHHHHHhcCCCEEEEEccH---HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhhc
Confidence 349999999999999999887 89996654 33332 22333 278999999998877 88999999776655
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
......++.++.+++|+|||||++++..
T Consensus 142 l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 142 LLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp BTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred ccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 5455667789999999999999997665
No 133
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.22 E-value=1.2e-10 Score=104.42 Aligned_cols=132 Identities=17% Similarity=0.163 Sum_probs=84.7
Q ss_pred EEEEEcCCcchHHHHHHHc----CCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC---------------------
Q 047630 239 IGLDIGGGVATFAVRMMER----NITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP--------------------- 293 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~----g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp--------------------- 293 (392)
.|||+|||+|.++..++++ +..++|+|++... ....+.++++|+...+
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~ 97 (201)
T 2plw_A 25 IILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYK 97 (201)
T ss_dssp EEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-------CCTTCEEEECCTTTTSSCCC-----------CHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-------CCCCceEEEccccchhhhhhccccccccccchhhHHH
Confidence 3499999999999999985 3578886655411 1123688889888776
Q ss_pred ----CCCCcccEEEEcccccccCC--chh------HHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeE
Q 047630 294 ----FFDNTLDIVHSMHVLSNWIP--TTL------LHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNK 361 (392)
Q Consensus 294 ----f~d~sFDlV~s~~~l~~~~~--~~~------l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~ 361 (392)
+++++||+|++..++++... .+. ...+++++.++|||||.|++..+... .. ..+...++. .|..
T Consensus 98 ~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~--~~-~~l~~~l~~-~f~~ 173 (201)
T 2plw_A 98 LKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS--QT-NNLKTYLKG-MFQL 173 (201)
T ss_dssp HHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST--TH-HHHHHHHHT-TEEE
T ss_pred HHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC--CH-HHHHHHHHH-HHhe
Confidence 56789999999877654211 011 13488999999999999998765432 22 235555555 3776
Q ss_pred EEEEEeeccCCCCcccceeeEE
Q 047630 362 LKWVVGRKLDRGPELREMYLSA 383 (392)
Q Consensus 362 i~w~~~~k~d~~~~~~e~ylsa 383 (392)
+.+..... ......|.|+.+
T Consensus 174 v~~~~~~~--~r~~s~e~y~v~ 193 (201)
T 2plw_A 174 VHTTKPKA--SRNESREIYLVC 193 (201)
T ss_dssp EEECCCC-------CCEEEEEE
T ss_pred EEEECCcc--cCCcCceEEEEE
Confidence 66532211 112455777633
No 134
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.22 E-value=1.8e-11 Score=114.37 Aligned_cols=138 Identities=12% Similarity=0.071 Sum_probs=81.9
Q ss_pred EEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhcCCccEEEe---ccCcC---CCCCCcccEEEEccccccc
Q 047630 239 IGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASRGVVPLYIS---ISQRL---PFFDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~---d~~~L---pf~d~sFDlV~s~~~l~~~ 311 (392)
+|||||||+|.++..+++.+. .|+|+|++. .+.+.+.++.. ..... ++..+ .+....||.+.+..++.++
T Consensus 40 ~VLDiGcGtG~~t~~la~~g~~~V~gvDis~--~ml~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l 116 (232)
T 3opn_A 40 TCLDIGSSTGGFTDVMLQNGAKLVYALDVGT--NQLAWKIRSDE-RVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL 116 (232)
T ss_dssp EEEEETCTTSHHHHHHHHTTCSEEEEECSSC--CCCCHHHHTCT-TEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG
T ss_pred EEEEEccCCCHHHHHHHhcCCCEEEEEcCCH--HHHHHHHHhCc-cccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH
Confidence 459999999999999999885 898855544 44444333321 11111 11111 1111124555554444443
Q ss_pred CCchhHHHHHHHHHHcccCCcEEEEEe---eccccc---------------chHHHHHHHHHHcCCeEEEEEEeeccCCC
Q 047630 312 IPTTLLHFLMFDIYRVLRPGGLFWLDH---FFCVGA---------------QLEDVYVPLIESVGFNKLKWVVGRKLDRG 373 (392)
Q Consensus 312 ~~~~~l~~~L~el~RvLKPGG~lii~~---~~~~~~---------------~l~~~l~~ll~~aGf~~i~w~~~~k~d~~ 373 (392)
..++.+++|+|||||.|++.. +....+ ...+++.++++++||+.+.+.......
T Consensus 117 ------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~g-- 188 (232)
T 3opn_A 117 ------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKG-- 188 (232)
T ss_dssp ------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSCB--
T ss_pred ------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCCC--
Confidence 358999999999999998862 111100 125568899999999998887554322
Q ss_pred CcccceeeEEEEEcC
Q 047630 374 PELREMYLSALLEKP 388 (392)
Q Consensus 374 ~~~~e~ylsai~~Kp 388 (392)
...+..|+ ..++|.
T Consensus 189 ~~gn~e~l-~~~~~~ 202 (232)
T 3opn_A 189 GAGNVEFL-VHLLKD 202 (232)
T ss_dssp TTTBCCEE-EEEEES
T ss_pred CCCCHHHH-HHHhhc
Confidence 22333444 355663
No 135
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.21 E-value=7.7e-12 Score=112.42 Aligned_cols=138 Identities=13% Similarity=0.073 Sum_probs=81.7
Q ss_pred HHHHHHHHHhhCCC-CcccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc----C-CccEEEeccCcC
Q 047630 221 LDFSIDEVLATKKP-GTIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR----G-VVPLYISISQRL 292 (392)
Q Consensus 221 ~~~lI~~ll~l~~~-~~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r----g-~i~~~~~d~~~L 292 (392)
.+.+++.++..... ..-.+|||+|||+|.++..+++. +..++++|++. .+.+.+.++ + .+.++++|+..
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~~~~~d~~~- 90 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSM--DALAVARRNAERFGAVVDWAAADGIE- 90 (215)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHH-
T ss_pred HHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCH--HHHHHHHHHHHHhCCceEEEEcchHh-
Confidence 44555555543211 12234499999999999999997 45788855543 333322222 2 25666777666
Q ss_pred CCCC-----CcccEEEEcccccccCC-----ch------------------hHHHHHHHHHHcccCCcE-EEEEeecccc
Q 047630 293 PFFD-----NTLDIVHSMHVLSNWIP-----TT------------------LLHFLMFDIYRVLRPGGL-FWLDHFFCVG 343 (392)
Q Consensus 293 pf~d-----~sFDlV~s~~~l~~~~~-----~~------------------~l~~~L~el~RvLKPGG~-lii~~~~~~~ 343 (392)
++.+ ++||+|+++..++.... .. ....+++++.++|||||+ +++....
T Consensus 91 ~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--- 167 (215)
T 4dzr_A 91 WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH--- 167 (215)
T ss_dssp HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT---
T ss_pred hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC---
Confidence 5555 89999999765543211 00 116789999999999999 5544322
Q ss_pred cchHHHHHHHHH--HcCCeEEEEE
Q 047630 344 AQLEDVYVPLIE--SVGFNKLKWV 365 (392)
Q Consensus 344 ~~l~~~l~~ll~--~aGf~~i~w~ 365 (392)
...+.+.++++ +.||..+...
T Consensus 168 -~~~~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 168 -NQADEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp -SCHHHHHHHTGGGGGGTEECCEE
T ss_pred -ccHHHHHHHHHHhhcCCceEEEE
Confidence 12344777888 8999877644
No 136
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.21 E-value=6.6e-11 Score=105.61 Aligned_cols=102 Identities=12% Similarity=0.086 Sum_probs=75.1
Q ss_pred CCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHH----hcC--CccEEEeccCcCC--CCCCcccEEE
Q 047630 233 KPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIA----SRG--VVPLYISISQRLP--FFDNTLDIVH 303 (392)
Q Consensus 233 ~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa----~rg--~i~~~~~d~~~Lp--f~d~sFDlV~ 303 (392)
++.+| ||+|||+|.++..+++.+. .++++|+| ..+.+.+. ..+ .+.++++|+..++ +++++||+|+
T Consensus 44 ~~~~v---LDlgcG~G~~~~~~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~ 118 (189)
T 3p9n_A 44 TGLAV---LDLYAGSGALGLEALSRGAASVLFVESD--QRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVL 118 (189)
T ss_dssp TTCEE---EEETCTTCHHHHHHHHTTCSEEEEEECC--HHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEE
T ss_pred CCCEE---EEeCCCcCHHHHHHHHCCCCeEEEEECC--HHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEE
Confidence 44445 9999999999998888765 68885544 34443222 223 3788899987764 3478999999
Q ss_pred EcccccccCCchhHHHHHHHHHH--cccCCcEEEEEeecc
Q 047630 304 SMHVLSNWIPTTLLHFLMFDIYR--VLRPGGLFWLDHFFC 341 (392)
Q Consensus 304 s~~~l~~~~~~~~l~~~L~el~R--vLKPGG~lii~~~~~ 341 (392)
+...+++. .+..+.++.++.+ +|||||++++.....
T Consensus 119 ~~~p~~~~--~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 119 ADPPYNVD--SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp ECCCTTSC--HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred ECCCCCcc--hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 98876542 3556789999999 999999999987543
No 137
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.21 E-value=5.6e-11 Score=111.91 Aligned_cols=119 Identities=16% Similarity=0.054 Sum_probs=85.5
Q ss_pred EEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHH----HhcCC--ccEEEeccCcCCCC---CCcccEEEEccc
Q 047630 239 IGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFI----ASRGV--VPLYISISQRLPFF---DNTLDIVHSMHV 307 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~a----a~rg~--i~~~~~d~~~Lpf~---d~sFDlV~s~~~ 307 (392)
.|||||||+|..+..++.. +..|+++| ++..+.+.+ .+.+. +.+++++++.++.. +++||+|++..+
T Consensus 83 ~vLDiG~G~G~~~i~la~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~ 160 (249)
T 3g89_A 83 RVLDLGTGAGFPGLPLKIVRPELELVLVD--ATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV 160 (249)
T ss_dssp EEEEETCTTTTTHHHHHHHCTTCEEEEEE--SCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESS
T ss_pred EEEEEcCCCCHHHHHHHHHCCCCEEEEEE--CCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCc
Confidence 4599999999999999885 56888844 544444432 22332 78889998887653 489999999653
Q ss_pred ccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEe
Q 047630 308 LSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 308 l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
. .+..++.++.++|||||+|++..-....+++ ..+...++..||+..+....
T Consensus 161 ~-------~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~-~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 161 A-------PLCVLSELLLPFLEVGGAAVAMKGPRVEEEL-APLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp C-------CHHHHHHHHGGGEEEEEEEEEEECSCCHHHH-TTHHHHHHHHTEEEEEEEEE
T ss_pred C-------CHHHHHHHHHHHcCCCeEEEEEeCCCcHHHH-HHHHHHHHHcCCeEEEEEEe
Confidence 2 2356999999999999999876543333333 33677888999988776644
No 138
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.19 E-value=2.2e-12 Score=119.44 Aligned_cols=135 Identities=13% Similarity=0.026 Sum_probs=91.6
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHH----HhcC---CccEEEeccCcCCC
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFI----ASRG---VVPLYISISQRLPF 294 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~a----a~rg---~i~~~~~d~~~Lpf 294 (392)
+.++..+....++.+| ||+|||+|.++..+++.+..|+++|++ ..+.+.+ ...+ .+.++++|+..++
T Consensus 67 ~~l~~~~~~~~~~~~v---LD~gcG~G~~~~~la~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 140 (241)
T 3gdh_A 67 EHIAGRVSQSFKCDVV---VDAFCGVGGNTIQFALTGMRVIAIDID--PVKIALARNNAEVYGIADKIEFICGDFLLLA- 140 (241)
T ss_dssp HHHHHHHHHHSCCSEE---EETTCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-
T ss_pred HHHHHHhhhccCCCEE---EECccccCHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHHcCCCcCeEEEECChHHhc-
Confidence 3344444444455666 999999999999999999999985544 3444322 2233 3788999988877
Q ss_pred CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec---------ccccchHHHHHHHHHHcCCeEEEEE
Q 047630 295 FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF---------CVGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 295 ~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~---------~~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
++++||+|++...+++..... ..+.+++++|||||.+++.... .+.....+.+..++...|.-.+...
T Consensus 141 ~~~~~D~v~~~~~~~~~~~~~---~~~~~~~~~L~pgG~~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~~ 217 (241)
T 3gdh_A 141 SFLKADVVFLSPPWGGPDYAT---AETFDIRTMMSPDGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQN 217 (241)
T ss_dssp GGCCCSEEEECCCCSSGGGGG---SSSBCTTTSCSSCHHHHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEEE
T ss_pred ccCCCCEEEECCCcCCcchhh---hHHHHHHhhcCCcceeHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCCEEEEeh
Confidence 678999999999888753332 3677899999999998666421 1111123446667777676555544
No 139
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.19 E-value=8.9e-11 Score=111.44 Aligned_cols=137 Identities=12% Similarity=0.133 Sum_probs=93.6
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh----cC--CccEEEeccCcC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRL 292 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~L 292 (392)
.+.+++.++...+ ..-..|||+|||+|.++..+++. +..+++ +|++....+.+.+ .+ .+.++++|....
T Consensus 95 te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~--vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~ 171 (276)
T 2b3t_A 95 TECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIA--VDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA 171 (276)
T ss_dssp HHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEE--ECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG
T ss_pred HHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEE--EECCHHHHHHHHHHHHHcCCCceEEEEcchhhh
Confidence 6777777776532 11224599999999999999974 668888 5554444443222 23 367888887663
Q ss_pred CCCCCcccEEEEccccccc------------CCc----------hhHHHHHHHHHHcccCCcEEEEEeecccccchHHHH
Q 047630 293 PFFDNTLDIVHSMHVLSNW------------IPT----------TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVY 350 (392)
Q Consensus 293 pf~d~sFDlV~s~~~l~~~------------~~~----------~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l 350 (392)
+++++||+|+++..++.. .+. .....++.++.++|||||++++...... .+.+
T Consensus 172 -~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----~~~~ 246 (276)
T 2b3t_A 172 -LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQ----GEAV 246 (276)
T ss_dssp -GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSC----HHHH
T ss_pred -cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchH----HHHH
Confidence 446789999998544322 110 3456799999999999999998754332 3457
Q ss_pred HHHHHHcCCeEEEEE
Q 047630 351 VPLIESVGFNKLKWV 365 (392)
Q Consensus 351 ~~ll~~aGf~~i~w~ 365 (392)
.++++++||+.+...
T Consensus 247 ~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 247 RQAFILAGYHDVETC 261 (276)
T ss_dssp HHHHHHTTCTTCCEE
T ss_pred HHHHHHCCCcEEEEE
Confidence 888999999876544
No 140
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.19 E-value=1.3e-10 Score=113.12 Aligned_cols=139 Identities=14% Similarity=0.063 Sum_probs=94.4
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHH----hcC--CccEEEeccCc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIA----SRG--VVPLYISISQR 291 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa----~rg--~i~~~~~d~~~ 291 (392)
...++..++...++.+| ||+|||+|..+..+++. +..+++ +|++....+.+. +.| .+.++++|+..
T Consensus 106 ~s~l~~~~l~~~~g~~V---LDlg~G~G~~t~~la~~~~~~~~v~a--vD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~ 180 (315)
T 1ixk_A 106 SSMYPPVALDPKPGEIV---ADMAAAPGGKTSYLAQLMRNDGVIYA--FDVDENRLRETRLNLSRLGVLNVILFHSSSLH 180 (315)
T ss_dssp HHHHHHHHHCCCTTCEE---EECCSSCSHHHHHHHHHTTTCSEEEE--ECSCHHHHHHHHHHHHHHTCCSEEEESSCGGG
T ss_pred HHHHHHHHhCCCCCCEE---EEeCCCCCHHHHHHHHHhCCCCEEEE--EcCCHHHHHHHHHHHHHhCCCeEEEEECChhh
Confidence 45555666666666666 99999999999999984 357888 555444444322 224 36788888888
Q ss_pred CCCCCCcccEEEEccc------ccccC------Cch-------hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHH
Q 047630 292 LPFFDNTLDIVHSMHV------LSNWI------PTT-------LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVP 352 (392)
Q Consensus 292 Lpf~d~sFDlV~s~~~------l~~~~------~~~-------~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ 352 (392)
++..+++||+|++... +++.. ... ....+|.++.++|||||++++.......++..+.+..
T Consensus 181 ~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~ 260 (315)
T 1ixk_A 181 IGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQW 260 (315)
T ss_dssp GGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHH
T ss_pred cccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHH
Confidence 7766778999998422 22100 001 1247999999999999999998754433444556778
Q ss_pred HHHHcCCeEEEE
Q 047630 353 LIESVGFNKLKW 364 (392)
Q Consensus 353 ll~~aGf~~i~w 364 (392)
++++.||+.+..
T Consensus 261 ~l~~~~~~~~~~ 272 (315)
T 1ixk_A 261 ALDNFDVELLPL 272 (315)
T ss_dssp HHHHSSEEEECC
T ss_pred HHhcCCCEEecC
Confidence 888889887654
No 141
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.19 E-value=6.5e-11 Score=115.73 Aligned_cols=103 Identities=16% Similarity=0.234 Sum_probs=77.8
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHH----HHhcC---CccEEEeccCcCCCCCCccc
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNF----IASRG---VVPLYISISQRLPFFDNTLD 300 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~----aa~rg---~i~~~~~d~~~Lpf~d~sFD 300 (392)
+...++.+| ||||||+|.++..+++.+. .|+++|++ ++... +.+.+ .+.++.+++..+++++++||
T Consensus 34 ~~~~~~~~V---LDiGcGtG~ls~~la~~g~~~v~~vD~s---~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 107 (328)
T 1g6q_1 34 KDLFKDKIV---LDVGCGTGILSMFAAKHGAKHVIGVDMS---SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVD 107 (328)
T ss_dssp HHHHTTCEE---EEETCTTSHHHHHHHHTCCSEEEEEESS---THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEE
T ss_pred HhhcCCCEE---EEecCccHHHHHHHHHCCCCEEEEEChH---HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCccc
Confidence 334455555 9999999999999999875 89886654 23332 22233 37889999999988888999
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
+|++....+.+.....++.++.++.|+|||||+++..
T Consensus 108 ~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 108 IIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp EEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 9999866555445566778999999999999999743
No 142
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.18 E-value=1e-10 Score=111.13 Aligned_cols=119 Identities=14% Similarity=0.047 Sum_probs=84.7
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHHh----c-C--CccEEEeccCcCCCCCCccc
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIAS----R-G--VVPLYISISQRLPFFDNTLD 300 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~----r-g--~i~~~~~d~~~Lpf~d~sFD 300 (392)
+.++.+| ||+|||+|.++..+++. +..+++ +|++....+.+.+ . | .+.+..+|+.. ++++++||
T Consensus 108 ~~~~~~V---LD~G~G~G~~~~~la~~~~~~~~v~~--vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD 181 (275)
T 1yb2_A 108 LRPGMDI---LEVGVGSGNMSSYILYALNGKGTLTV--VERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYD 181 (275)
T ss_dssp CCTTCEE---EEECCTTSHHHHHHHHHHTTSSEEEE--ECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEE
T ss_pred CCCcCEE---EEecCCCCHHHHHHHHHcCCCCEEEE--EECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCcc
Confidence 4444455 99999999999999986 678888 5554444443322 2 3 36788888877 66778999
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEE
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVV 366 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~ 366 (392)
+|++. ..+. ..+++++.++|||||++++..... +..+.+.+.+++.||+.++...
T Consensus 182 ~Vi~~-----~~~~---~~~l~~~~~~LkpgG~l~i~~~~~---~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 182 AVIAD-----IPDP---WNHVQKIASMMKPGSVATFYLPNF---DQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp EEEEC-----CSCG---GGSHHHHHHTEEEEEEEEEEESSH---HHHHHHHHHSGGGTEEEEEEEE
T ss_pred EEEEc-----CcCH---HHHHHHHHHHcCCCCEEEEEeCCH---HHHHHHHHHHHHCCCeEEEEEE
Confidence 99982 2222 358999999999999999886432 1223466778889998876654
No 143
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.18 E-value=1.1e-10 Score=108.45 Aligned_cols=119 Identities=11% Similarity=-0.003 Sum_probs=85.1
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHHhc-----C--CccEEEeccCcCCCCCCc
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIASR-----G--VVPLYISISQRLPFFDNT 298 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~r-----g--~i~~~~~d~~~Lpf~d~s 298 (392)
+.+.++.+| ||+|||+|.++..+++. +..++++| ++....+.+.++ + .+.+..+|....++++++
T Consensus 92 ~~~~~~~~v---LdiG~G~G~~~~~l~~~~~~~~~v~~~D--~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~ 166 (258)
T 2pwy_A 92 LDLAPGMRV---LEAGTGSGGLTLFLARAVGEKGLVESYE--ARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAA 166 (258)
T ss_dssp TTCCTTCEE---EEECCTTSHHHHHHHHHHCTTSEEEEEE--SCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTC
T ss_pred cCCCCCCEE---EEECCCcCHHHHHHHHHhCCCCEEEEEe--CCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCC
Confidence 334455555 99999999999999986 57888855 434444433322 3 477888998888888889
Q ss_pred ccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEE
Q 047630 299 LDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~ 363 (392)
||+|++. +.+. ..++.++.++|||||++++..... +. ...+.+.+++.||..++
T Consensus 167 ~D~v~~~-----~~~~---~~~l~~~~~~L~~gG~l~~~~~~~--~~-~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 167 YDGVALD-----LMEP---WKVLEKAALALKPDRFLVAYLPNI--TQ-VLELVRAAEAHPFRLER 220 (258)
T ss_dssp EEEEEEE-----SSCG---GGGHHHHHHHEEEEEEEEEEESCH--HH-HHHHHHHHTTTTEEEEE
T ss_pred cCEEEEC-----CcCH---HHHHHHHHHhCCCCCEEEEEeCCH--HH-HHHHHHHHHHCCCceEE
Confidence 9999983 2222 258999999999999998876432 22 23466678889998754
No 144
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.18 E-value=5.7e-11 Score=110.94 Aligned_cols=119 Identities=20% Similarity=0.294 Sum_probs=78.1
Q ss_pred EEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh----------cC--CccEEEeccCc-CC--CCCCcccE
Q 047630 239 IGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS----------RG--VVPLYISISQR-LP--FFDNTLDI 301 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~----------rg--~i~~~~~d~~~-Lp--f~d~sFDl 301 (392)
.|||||||+|.++..|++. +..++| +|++..+.+.+.+ .+ .+.++.+|+.. ++ +++++||.
T Consensus 49 ~vLDiGcG~G~~~~~la~~~p~~~v~G--iDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~ 126 (235)
T 3ckk_A 49 EFADIGCGYGGLLVELSPLFPDTLILG--LEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTK 126 (235)
T ss_dssp EEEEETCTTCHHHHHHGGGSTTSEEEE--EESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEE
T ss_pred eEEEEccCCcHHHHHHHHHCCCCeEEE--EECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeE
Confidence 4599999999999999986 457888 5554444432221 12 37889999886 66 78899999
Q ss_pred EEEcccccccCCch-----hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcC-CeEE
Q 047630 302 VHSMHVLSNWIPTT-----LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVG-FNKL 362 (392)
Q Consensus 302 V~s~~~l~~~~~~~-----~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aG-f~~i 362 (392)
|++.+.-.+..... ....+++++.|+|||||.|++.... ........+.+.+.| |+.+
T Consensus 127 v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~---~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 127 MFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV---LELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC---HHHHHHHHHHHHTSTTEEEE
T ss_pred EEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC---HHHHHHHHHHHHHCCCcccc
Confidence 98765432211000 0136999999999999999887422 233344555666666 4443
No 145
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.16 E-value=2.5e-11 Score=112.05 Aligned_cols=118 Identities=17% Similarity=0.243 Sum_probs=79.1
Q ss_pred EEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhHHHH----HhcC--CccEEEeccCcC-C--CCCCcccEEEEccc
Q 047630 239 IGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFNNFI----ASRG--VVPLYISISQRL-P--FFDNTLDIVHSMHV 307 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~~~a----a~rg--~i~~~~~d~~~L-p--f~d~sFDlV~s~~~ 307 (392)
+|||||||+|.++..+++.+ ..++| +|++....+.+ .+.+ .+.++.+|+..+ + +++++||.|++.+.
T Consensus 37 ~vLDiGcG~G~~~~~lA~~~p~~~v~g--iD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~ 114 (218)
T 3dxy_A 37 VTLEIGFGMGASLVAMAKDRPEQDFLG--IEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFP 114 (218)
T ss_dssp EEEEESCTTCHHHHHHHHHCTTSEEEE--ECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESC
T ss_pred eEEEEeeeChHHHHHHHHHCCCCeEEE--EEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCC
Confidence 35999999999999999864 46777 55644554432 2333 378888887774 3 67899999998865
Q ss_pred ccccCCchhH------HHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHc-CCeEE
Q 047630 308 LSNWIPTTLL------HFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESV-GFNKL 362 (392)
Q Consensus 308 l~~~~~~~~l------~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~a-Gf~~i 362 (392)
.. |...... ..+++++.|+|||||+|++..- .....+...+.+... +|+.+
T Consensus 115 ~p-~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td---~~~~~~~~~~~~~~~~~~~~~ 172 (218)
T 3dxy_A 115 DP-WHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD---WEPYAEHMLEVMSSIDGYKNL 172 (218)
T ss_dssp CC-CCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES---CHHHHHHHHHHHHTSTTEEEC
T ss_pred CC-ccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC---CHHHHHHHHHHHHhCCCcccc
Confidence 42 2222211 2489999999999999988752 223334445555543 45544
No 146
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.15 E-value=3.8e-10 Score=103.34 Aligned_cols=130 Identities=22% Similarity=0.335 Sum_probs=85.0
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHHh----cC---CccEEEeccC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQ 290 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~ 290 (392)
...++..++...++.+| ||||||+|..+..+++. +..++++|++ ..+.+.+.+ .+ .+.++++|+.
T Consensus 46 ~~~~l~~l~~~~~~~~v---LdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (221)
T 3u81_A 46 KGQIMDAVIREYSPSLV---LELGAYCGYSAVRMARLLQPGARLLTMEIN--PDCAAITQQMLNFAGLQDKVTILNGASQ 120 (221)
T ss_dssp HHHHHHHHHHHHCCSEE---EEECCTTSHHHHHHHTTSCTTCEEEEEESC--HHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHhcCCCEE---EEECCCCCHHHHHHHHhCCCCCEEEEEeCC--hHHHHHHHHHHHHcCCCCceEEEECCHH
Confidence 44455666655555555 99999999999999983 6788885543 444443322 23 2788888864
Q ss_pred c-CCCCC-----CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHH-cCCeEE
Q 047630 291 R-LPFFD-----NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIES-VGFNKL 362 (392)
Q Consensus 291 ~-Lpf~d-----~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~-aGf~~i 362 (392)
. ++... ++||+|++....+++ .....++.++ ++|||||+|++++...... .+ +.+.+.+ -+|+..
T Consensus 121 ~~l~~~~~~~~~~~fD~V~~d~~~~~~---~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~--~~-~~~~l~~~~~~~~~ 192 (221)
T 3u81_A 121 DLIPQLKKKYDVDTLDMVFLDHWKDRY---LPDTLLLEKC-GLLRKGTVLLADNVIVPGT--PD-FLAYVRGSSSFECT 192 (221)
T ss_dssp HHGGGTTTTSCCCCCSEEEECSCGGGH---HHHHHHHHHT-TCCCTTCEEEESCCCCCCC--HH-HHHHHHHCTTEEEE
T ss_pred HHHHHHHHhcCCCceEEEEEcCCcccc---hHHHHHHHhc-cccCCCeEEEEeCCCCcch--HH-HHHHHhhCCCceEE
Confidence 4 33322 789999998777665 3333567777 9999999999998764332 23 4445544 344443
No 147
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.15 E-value=3.5e-11 Score=120.99 Aligned_cols=103 Identities=9% Similarity=0.064 Sum_probs=75.5
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHH-cCC-EEEEEecCCCchhHHHHH-----------hc----CCccEEEeccCcCC
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMME-RNI-TIVTTSMNLNGPFNNFIA-----------SR----GVVPLYISISQRLP 293 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa-----------~r----g~i~~~~~d~~~Lp 293 (392)
+.++..+ ||||||+|.++..++. .+. .++|+|++ ....+.+. .. +.+.++++|+..+|
T Consensus 171 l~~gd~V---LDLGCGtG~l~l~lA~~~g~~kVvGIDiS--~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp 245 (438)
T 3uwp_A 171 MTDDDLF---VDLGSGVGQVVLQVAAATNCKHHYGVEKA--DIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE 245 (438)
T ss_dssp CCTTCEE---EEESCTTSHHHHHHHHHCCCSEEEEEECC--HHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHH
T ss_pred CCCCCEE---EEeCCCCCHHHHHHHHHCCCCEEEEEeCC--HHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCc
Confidence 4555556 9999999999999886 455 48885544 33332111 11 34789999999988
Q ss_pred CCC--CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc
Q 047630 294 FFD--NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342 (392)
Q Consensus 294 f~d--~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~ 342 (392)
+.+ ..||+|+++..++ + .++...|.+++|+|||||+|++.+.+..
T Consensus 246 ~~d~~~~aDVVf~Nn~~F-~---pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 246 WRERIANTSVIFVNNFAF-G---PEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp HHHHHHTCSEEEECCTTC-C---HHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred cccccCCccEEEEccccc-C---chHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 754 4799999987653 2 5666789999999999999999986654
No 148
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.15 E-value=2e-10 Score=103.36 Aligned_cols=110 Identities=16% Similarity=0.073 Sum_probs=77.1
Q ss_pred EEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHH----hcCC--ccEEEeccCcCCCCCCcccEEEEccccccc
Q 047630 240 GLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIA----SRGV--VPLYISISQRLPFFDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa----~rg~--i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~ 311 (392)
|||+|||+|.++..+++. +..++++| ++....+.+. ..+. +.+..+|...++ ++++||+|++...
T Consensus 69 vLDiG~G~G~~~~~l~~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~---- 141 (207)
T 1jsx_A 69 FIDVGTGPGLPGIPLSIVRPEAHFTLLD--SLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF---- 141 (207)
T ss_dssp EEEETCTTTTTHHHHHHHCTTSEEEEEE--SCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS----
T ss_pred EEEECCCCCHHHHHHHHHCCCCEEEEEe--CCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc----
Confidence 499999999999999985 67888855 4334443322 2232 678888888776 4678999997542
Q ss_pred CCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEE
Q 047630 312 IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 312 ~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
.....++.++.++|||||++++...... .+++.++++ ||+.++..
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~~~~~----~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALKGQMP----EDEIALLPE--EYQVESVV 186 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEESSCC----HHHHHTSCT--TEEEEEEE
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEeCCCc----hHHHHHHhc--CCceeeee
Confidence 2235799999999999999998854332 223444444 88877644
No 149
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.14 E-value=9.4e-11 Score=112.27 Aligned_cols=97 Identities=11% Similarity=0.170 Sum_probs=72.3
Q ss_pred EEEEEcCCcch----HHHHHHHc------CCEEEEEecCCCchhHHHHHhc-----------------------------
Q 047630 239 IGLDIGGGVAT----FAVRMMER------NITIVTTSMNLNGPFNNFIASR----------------------------- 279 (392)
Q Consensus 239 ~VLDIGCGtG~----~a~~La~~------g~~vvg~~iD~~a~~~~~aa~r----------------------------- 279 (392)
.|||+|||||. ++..|++. +..|+|+|+| ..+.+.|.+.
T Consensus 108 rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis--~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 108 RVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDID--TEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp EEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESC--HHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred EEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECC--HHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 45999999998 66666664 3578886654 3444433321
Q ss_pred --------CCccEEEeccCcCCCC-CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 280 --------GVVPLYISISQRLPFF-DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 280 --------g~i~~~~~d~~~Lpf~-d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
..+.|.++|....|++ .+.||+|+|.++++++ +++..++++.+++++|||||+|++.+
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 1256778887776665 5789999999999886 55666899999999999999998864
No 150
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.13 E-value=1.3e-10 Score=105.01 Aligned_cols=97 Identities=11% Similarity=-0.007 Sum_probs=73.6
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cC--CccEEEeccCcCCCCCCcccEE
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRLPFFDNTLDIV 302 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~Lpf~d~sFDlV 302 (392)
+.+.++.+| ||+|||+|.++..+++.+..++++|++ ....+.+.+ .+ .+.+..+|....+..+++||+|
T Consensus 73 l~~~~~~~v---LdiG~G~G~~~~~la~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i 147 (210)
T 3lbf_A 73 LELTPQSRV---LEIGTGSGYQTAILAHLVQHVCSVERI--KGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAI 147 (210)
T ss_dssp TTCCTTCEE---EEECCTTSHHHHHHHHHSSEEEEEESC--HHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEE
T ss_pred cCCCCCCEE---EEEcCCCCHHHHHHHHhCCEEEEEecC--HHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEE
Confidence 334455555 999999999999999998899995544 444443332 23 3678889988776677899999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
++..+++++. .++.++|||||++++...
T Consensus 148 ~~~~~~~~~~---------~~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 148 IVTAAPPEIP---------TALMTQLDEGGILVLPVG 175 (210)
T ss_dssp EESSBCSSCC---------THHHHTEEEEEEEEEEEC
T ss_pred EEccchhhhh---------HHHHHhcccCcEEEEEEc
Confidence 9999998752 368899999999988753
No 151
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.13 E-value=1.2e-10 Score=112.56 Aligned_cols=99 Identities=9% Similarity=0.090 Sum_probs=72.6
Q ss_pred HHhhCCCCcccEEEEEcCCcchHHHH-HHH-cCCEEEEEecCCCchhHHHHHh----cC--CccEEEeccCcCCCCCCcc
Q 047630 228 VLATKKPGTIRIGLDIGGGVATFAVR-MME-RNITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRLPFFDNTL 299 (392)
Q Consensus 228 ll~l~~~~~ir~VLDIGCGtG~~a~~-La~-~g~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~Lpf~d~sF 299 (392)
++++.++.+| ||||||+|.++.. +++ .+..|+++|+| ..+.+.+.+ .| .+.++++|+..++ +++|
T Consensus 117 la~l~~g~rV---LDIGcG~G~~ta~~lA~~~ga~V~gIDis--~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~F 189 (298)
T 3fpf_A 117 LGRFRRGERA---VFIGGGPLPLTGILLSHVYGMRVNVVEIE--PDIAELSRKVIEGLGVDGVNVITGDETVID--GLEF 189 (298)
T ss_dssp HTTCCTTCEE---EEECCCSSCHHHHHHHHTTCCEEEEEESS--HHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCC
T ss_pred HcCCCCcCEE---EEECCCccHHHHHHHHHccCCEEEEEECC--HHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCc
Confidence 4456666666 9999999987644 455 58889985544 455543332 24 3788999988876 7899
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
|+|++.... .+.+++++++.|+|||||+|++...
T Consensus 190 DvV~~~a~~------~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 190 DVLMVAALA------EPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp SEEEECTTC------SCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CEEEECCCc------cCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 999986542 3445799999999999999998874
No 152
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.13 E-value=9.5e-11 Score=106.27 Aligned_cols=100 Identities=13% Similarity=0.142 Sum_probs=71.7
Q ss_pred CCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHh----cC----CccEEEeccCcCCC--CCCc-cc
Q 047630 233 KPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIAS----RG----VVPLYISISQRLPF--FDNT-LD 300 (392)
Q Consensus 233 ~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~----rg----~i~~~~~d~~~Lpf--~d~s-FD 300 (392)
++.+| ||+|||+|.++..++.++. .|++ +|++..+.+.+.+ .+ .+.++.+|+..+.. .+++ ||
T Consensus 53 ~~~~v---LDlGcGtG~~~~~~~~~~~~~v~g--vD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 127 (201)
T 2ift_A 53 HQSEC---LDGFAGSGSLGFEALSRQAKKVTF--LELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFD 127 (201)
T ss_dssp TTCEE---EETTCTTCHHHHHHHHTTCSEEEE--ECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEE
T ss_pred CCCeE---EEcCCccCHHHHHHHHccCCEEEE--EECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCC
Confidence 44555 9999999999998887764 7888 5554444443322 23 36788888766532 3678 99
Q ss_pred EEEEcccccccCCchhHHHHHHHH--HHcccCCcEEEEEeecc
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDI--YRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el--~RvLKPGG~lii~~~~~ 341 (392)
+|++...++ . ...+.+++++ .|+|||||.+++.....
T Consensus 128 ~I~~~~~~~-~---~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 128 VVFLDPPFH-F---NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEEECCCSS-S---CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EEEECCCCC-C---ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 999987754 2 4456788888 77899999999887544
No 153
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.13 E-value=2e-10 Score=107.09 Aligned_cols=129 Identities=11% Similarity=0.091 Sum_probs=86.3
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc------CCEEEEEecCCCchhHHHHHh-cCCccEEEeccCcC--
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER------NITIVTTSMNLNGPFNNFIAS-RGVVPLYISISQRL-- 292 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~------g~~vvg~~iD~~a~~~~~aa~-rg~i~~~~~d~~~L-- 292 (392)
...+..++...++.+| ||||||+|..+..|++. +.+|+++|++. .+.+.+.. ...+.++++|...+
T Consensus 70 ~~~l~~~l~~~~~~~V---LDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~--~~l~~a~~~~~~v~~~~gD~~~~~~ 144 (236)
T 2bm8_A 70 QAVYHDMLWELRPRTI---VELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDL--SRCQIPASDMENITLHQGDCSDLTT 144 (236)
T ss_dssp HHHHHHHHHHHCCSEE---EEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCC--TTCCCCGGGCTTEEEEECCSSCSGG
T ss_pred HHHHHHHHHhcCCCEE---EEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCCh--HHHHHHhccCCceEEEECcchhHHH
Confidence 4455555555444455 99999999999999886 67888866554 33222212 23478999998874
Q ss_pred -CCCC-CcccEEEEcccccccCCchhHHHHHHHHHH-cccCCcEEEEEeecccc-cchHHHHHHHHHHc--CCeE
Q 047630 293 -PFFD-NTLDIVHSMHVLSNWIPTTLLHFLMFDIYR-VLRPGGLFWLDHFFCVG-AQLEDVYVPLIESV--GFNK 361 (392)
Q Consensus 293 -pf~d-~sFDlV~s~~~l~~~~~~~~l~~~L~el~R-vLKPGG~lii~~~~~~~-~~l~~~l~~ll~~a--Gf~~ 361 (392)
++.+ .+||+|++... | .....++.++.| +|||||+|++.++.... ....+.+.+++++. +|+.
T Consensus 145 l~~~~~~~fD~I~~d~~--~----~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 145 FEHLREMAHPLIFIDNA--H----ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp GGGGSSSCSSEEEEESS--C----SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred HHhhccCCCCEEEECCc--h----HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 5544 47999998654 2 234579999998 99999999998652111 11123577788877 4554
No 154
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.12 E-value=2.1e-10 Score=107.02 Aligned_cols=114 Identities=9% Similarity=-0.050 Sum_probs=76.3
Q ss_pred HHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc----CCEEEEEecCCCchhHHHHHh----c---CC----------
Q 047630 223 FSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER----NITIVTTSMNLNGPFNNFIAS----R---GV---------- 281 (392)
Q Consensus 223 ~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~----g~~vvg~~iD~~a~~~~~aa~----r---g~---------- 281 (392)
.+++.++.......-..|||+|||+|.++..+++. +..++|+|+| ....+.+.+ . +.
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis--~~~l~~A~~~~~~~~~~~~~~~~~~~~~~ 115 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVD--PAPLELAAKNLALLSPAGLTARELERREQ 115 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESC--HHHHHHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECC--HHHHHHHHHHHHHhhhccccccchhhhhh
Confidence 56666665432222234599999999999999886 4577775544 344332221 1 11
Q ss_pred ------------------cc-------------EEEeccCcCCC-----CCCcccEEEEcccccccCC------chhHHH
Q 047630 282 ------------------VP-------------LYISISQRLPF-----FDNTLDIVHSMHVLSNWIP------TTLLHF 319 (392)
Q Consensus 282 ------------------i~-------------~~~~d~~~Lpf-----~d~sFDlV~s~~~l~~~~~------~~~l~~ 319 (392)
+. +.++|...... ..++||+|+++..++.... .+....
T Consensus 116 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~ 195 (250)
T 1o9g_A 116 SERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAG 195 (250)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHH
T ss_pred hhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHH
Confidence 45 88888766321 3458999999877655432 245668
Q ss_pred HHHHHHHcccCCcEEEEEe
Q 047630 320 LMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 320 ~L~el~RvLKPGG~lii~~ 338 (392)
+++++.++|||||++++..
T Consensus 196 ~l~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 196 LLRSLASALPAHAVIAVTD 214 (250)
T ss_dssp HHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEeC
Confidence 9999999999999999843
No 155
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.12 E-value=5.5e-10 Score=99.48 Aligned_cols=140 Identities=14% Similarity=0.131 Sum_probs=83.3
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHc-C----------CEEEEEecCCCchhHHHHHhcCCccEE-EeccCcCC------
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMER-N----------ITIVTTSMNLNGPFNNFIASRGVVPLY-ISISQRLP------ 293 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~-g----------~~vvg~~iD~~a~~~~~aa~rg~i~~~-~~d~~~Lp------ 293 (392)
.++.+| ||+|||+|.++..+++. + ..++++|++. .. ....+.++ .+|....+
T Consensus 21 ~~~~~v---LDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~--~~-----~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 21 RPGLRV---LDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLH--IF-----PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CTTCEE---EEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSC--CC-----CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCCEE---EEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechh--cc-----cCCCCeEEEeccCCCHHHHHHHH
Confidence 344455 99999999999999986 3 6788855543 11 01225677 77765543
Q ss_pred --CCCCcccEEEEccccccc----CCch----hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEE
Q 047630 294 --FFDNTLDIVHSMHVLSNW----IPTT----LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 294 --f~d~sFDlV~s~~~l~~~----~~~~----~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~ 363 (392)
+++++||+|++..+++.. .+.. ..+.+++++.|+|||||.|++..+... .. ..+...+... |..+.
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~--~~-~~~~~~l~~~-f~~v~ 166 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS--QS-RRLQRRLTEE-FQNVR 166 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG--GG-HHHHHHHHHH-EEEEE
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc--cH-HHHHHHHHHH-hcceE
Confidence 345689999997655421 1111 114789999999999999999876442 22 2345555553 66666
Q ss_pred EEEeeccCCCCcccceeeEEEEEc
Q 047630 364 WVVGRKLDRGPELREMYLSALLEK 387 (392)
Q Consensus 364 w~~~~k~d~~~~~~e~ylsai~~K 387 (392)
+..... . .....|.|+.+...|
T Consensus 167 ~~~~~~-~-~~~~~e~~~v~~g~~ 188 (196)
T 2nyu_A 167 IIKPEA-S-RKESSEVYFLATQYH 188 (196)
T ss_dssp EECCC----------EEEEEEEEC
T ss_pred EECCcc-c-CccCceEEEEeeecC
Confidence 542211 1 123456666554444
No 156
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.12 E-value=1.2e-09 Score=100.14 Aligned_cols=119 Identities=13% Similarity=0.073 Sum_probs=77.7
Q ss_pred EEEEEcCCcchHHHHHHHc-C--CEEEEEecCCCchhHHH----HHhcCCccEEEeccCcCC---CCCCcccEEEEcccc
Q 047630 239 IGLDIGGGVATFAVRMMER-N--ITIVTTSMNLNGPFNNF----IASRGVVPLYISISQRLP---FFDNTLDIVHSMHVL 308 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-g--~~vvg~~iD~~a~~~~~----aa~rg~i~~~~~d~~~Lp---f~d~sFDlV~s~~~l 308 (392)
.|||+|||+|.++..+++. + ..++++| ++..+.+. +.+...+.++.+|+.... ..+++||+|++...
T Consensus 76 ~vLDlG~G~G~~~~~la~~~~~~~~v~~vD--~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~- 152 (227)
T 1g8a_A 76 SVLYLGIASGTTASHVSDIVGWEGKIFGIE--FSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA- 152 (227)
T ss_dssp EEEEETTTSTTHHHHHHHHHCTTSEEEEEE--SCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC-
T ss_pred EEEEEeccCCHHHHHHHHHhCCCeEEEEEE--CCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC-
Confidence 3499999999999999975 3 6788854 53433322 222234788888877632 22468999997654
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEEEEEeeccccc-------ch-HHHHHHHHHHcCCeEEEEEEe
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA-------QL-EDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~-------~l-~~~l~~ll~~aGf~~i~w~~~ 367 (392)
.+.....++.++.++|||||++++. +..... .. .+++..+ +++ |+.++....
T Consensus 153 ----~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~ 212 (227)
T 1g8a_A 153 ----QPTQAKILIDNAEVYLKRGGYGMIA-VKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNL 212 (227)
T ss_dssp ----STTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEEC
T ss_pred ----CHhHHHHHHHHHHHhcCCCCEEEEE-EecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEecc
Confidence 1233335699999999999999887 322111 11 3445555 666 998876543
No 157
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.11 E-value=3.5e-10 Score=105.96 Aligned_cols=110 Identities=15% Similarity=0.082 Sum_probs=77.6
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHH----hcC---CccEEEeccC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQ 290 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~ 290 (392)
...++..+..+.++.+| ||||||+|..+..+++. +..++++| ++....+.+. +.+ .+.++++|+.
T Consensus 51 ~~~~l~~l~~~~~~~~V---LdiG~G~G~~~~~la~~~~~~~~v~~vD--~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 125 (248)
T 3tfw_A 51 QGQFLALLVRLTQAKRI---LEIGTLGGYSTIWMARELPADGQLLTLE--ADAHHAQVARENLQLAGVDQRVTLREGPAL 125 (248)
T ss_dssp HHHHHHHHHHHHTCSEE---EEECCTTSHHHHHHHTTSCTTCEEEEEE--CCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred HHHHHHHHHhhcCCCEE---EEecCCchHHHHHHHHhCCCCCEEEEEE--CCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 34455555555555555 99999999999999986 67888855 4344444332 223 3678888876
Q ss_pred c-CCCC--CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc
Q 047630 291 R-LPFF--DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 291 ~-Lpf~--d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~ 341 (392)
. ++.. .++||+|++.... .....+++++.++|||||+|++++...
T Consensus 126 ~~l~~~~~~~~fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 126 QSLESLGECPAFDLIFIDADK------PNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp HHHHTCCSCCCCSEEEECSCG------GGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred HHHHhcCCCCCeEEEEECCch------HHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 5 3433 3489999986532 344578999999999999999998654
No 158
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.11 E-value=8.6e-10 Score=104.15 Aligned_cols=121 Identities=12% Similarity=0.065 Sum_probs=79.9
Q ss_pred EEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhHHHHHh-------cC---CccEEEeccCcC-------CCCCCcc
Q 047630 239 IGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFNNFIAS-------RG---VVPLYISISQRL-------PFFDNTL 299 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~~~aa~-------rg---~i~~~~~d~~~L-------pf~d~sF 299 (392)
.|||+|||+|.++..++++. ..++++| ++....+.+.+ .+ .+.++.+|+..+ ++++++|
T Consensus 39 ~VLDlG~G~G~~~l~la~~~~~~~v~gvD--i~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 39 RIADLGAGAGAAGMAVAARLEKAEVTLYE--RSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp EEEECCSSSSHHHHHHHHHCTTEEEEEEE--SSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred EEEEeCChHhHHHHHHHHhCCCCeEEEEE--CCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 45999999999999999974 5777755 53444443322 22 267888998876 3567899
Q ss_pred cEEEEccccccc---------------CCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEE
Q 047630 300 DIVHSMHVLSNW---------------IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 300 DlV~s~~~l~~~---------------~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
|+|+++..+... .....++.+++++.++|||||+|++..... .. .++.+.+++. |..++.
T Consensus 117 D~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~-~~~~~~l~~~-~~~~~i 191 (260)
T 2ozv_A 117 HHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ---SV-AEIIAACGSR-FGGLEI 191 (260)
T ss_dssp EEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG---GH-HHHHHHHTTT-EEEEEE
T ss_pred CEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH---HH-HHHHHHHHhc-CCceEE
Confidence 999998544321 112336789999999999999998864322 33 3355566653 665554
Q ss_pred EE
Q 047630 365 VV 366 (392)
Q Consensus 365 ~~ 366 (392)
..
T Consensus 192 ~~ 193 (260)
T 2ozv_A 192 TL 193 (260)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 159
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.10 E-value=2e-10 Score=106.97 Aligned_cols=119 Identities=13% Similarity=0.115 Sum_probs=83.9
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHHhc----C---CccEEEeccCcCCCCCCc
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIASR----G---VVPLYISISQRLPFFDNT 298 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~r----g---~i~~~~~d~~~Lpf~d~s 298 (392)
+.+.++.+| ||+|||+|.++..+++. +..+++ +|++....+.+.++ + .+.+..+|+... +++++
T Consensus 89 ~~~~~~~~v---ldiG~G~G~~~~~l~~~~~~~~~v~~--~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 162 (255)
T 3mb5_A 89 AGISPGDFI---VEAGVGSGALTLFLANIVGPEGRVVS--YEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEEN 162 (255)
T ss_dssp TTCCTTCEE---EEECCTTSHHHHHHHHHHCTTSEEEE--ECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCS
T ss_pred hCCCCCCEE---EEecCCchHHHHHHHHHhCCCeEEEE--EecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCC
Confidence 344455555 99999999999999997 678888 55544444433322 3 267888887754 67889
Q ss_pred ccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcC--CeEEEE
Q 047630 299 LDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVG--FNKLKW 364 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aG--f~~i~w 364 (392)
||+|++.. .++ ..+++++.++|||||++++..... +....+.+.+++.| |..++.
T Consensus 163 ~D~v~~~~-----~~~---~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 163 VDHVILDL-----PQP---ERVVEHAAKALKPGGFFVAYTPCS---NQVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp EEEEEECS-----SCG---GGGHHHHHHHEEEEEEEEEEESSH---HHHHHHHHHHHHTGGGBSCCEE
T ss_pred cCEEEECC-----CCH---HHHHHHHHHHcCCCCEEEEEECCH---HHHHHHHHHHHHcCCCccccEE
Confidence 99999842 122 248999999999999998875332 22344777889999 876654
No 160
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.10 E-value=1.2e-10 Score=102.37 Aligned_cols=97 Identities=13% Similarity=0.090 Sum_probs=69.1
Q ss_pred EEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHHHHH----hcC---CccEEEeccCc-CCCCCCcccEEEEccccc
Q 047630 239 IGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQR-LPFFDNTLDIVHSMHVLS 309 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~~-Lpf~d~sFDlV~s~~~l~ 309 (392)
.|||+|||+|.++..+++.+ ..+++ +|++..+.+.+. ..+ .+.++.+|+.. ++..++.||+|++...++
T Consensus 34 ~vLDlGcG~G~~~~~l~~~~~~~v~~--vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 34 RVLDLFAGSGGLAIEAVSRGMSAAVL--VEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYA 111 (177)
T ss_dssp EEEEETCTTCHHHHHHHHTTCCEEEE--ECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSH
T ss_pred eEEEeCCCCCHHHHHHHHcCCCEEEE--EECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCC
Confidence 34999999999999999885 47888 555444444332 222 26788888766 454557799999987653
Q ss_pred ccCCchhHHHHHHHHH--HcccCCcEEEEEeecc
Q 047630 310 NWIPTTLLHFLMFDIY--RVLRPGGLFWLDHFFC 341 (392)
Q Consensus 310 ~~~~~~~l~~~L~el~--RvLKPGG~lii~~~~~ 341 (392)
. ...+.+++.+. ++|||||++++.....
T Consensus 112 ~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 112 K----ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp H----HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred c----chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 2 33456777776 9999999999987544
No 161
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.09 E-value=2.2e-10 Score=114.87 Aligned_cols=94 Identities=17% Similarity=0.162 Sum_probs=72.3
Q ss_pred cEEEEEcCC------cchHHHHHHHc---CCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCC------CCcccEE
Q 047630 238 RIGLDIGGG------VATFAVRMMER---NITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFF------DNTLDIV 302 (392)
Q Consensus 238 r~VLDIGCG------tG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~------d~sFDlV 302 (392)
.+||||||| +|..+..+++. +..++|+|++. .+ ......+.++++|..++++. +++||+|
T Consensus 218 ~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp--~m---~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlV 292 (419)
T 3sso_A 218 VRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMD--KS---HVDELRIRTIQGDQNDAEFLDRIARRYGPFDIV 292 (419)
T ss_dssp CEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSC--CG---GGCBTTEEEEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCH--HH---hhcCCCcEEEEecccccchhhhhhcccCCccEE
Confidence 345999999 77777777653 67899966655 22 12233589999999999887 7899999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~ 340 (392)
++..+ |++ .+...+|++++|+|||||+|++.++.
T Consensus 293 isdgs-H~~---~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 293 IDDGS-HIN---AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp EECSC-CCH---HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred EECCc-ccc---hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 98754 554 55678999999999999999998754
No 162
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.08 E-value=1.9e-10 Score=106.49 Aligned_cols=110 Identities=14% Similarity=0.136 Sum_probs=78.1
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHH--cCCEEEEEecCCCchhHHHHH----hcC---CccEEEeccCc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMME--RNITIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQR 291 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~--~g~~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~~ 291 (392)
...++..++...++.+| ||||||+|..+..+++ .+..++++| ++....+.+. +.+ .+.++.+|+..
T Consensus 59 ~~~~l~~~~~~~~~~~v---LDiG~G~G~~~~~la~~~~~~~v~~vD--~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 59 TLDLIKQLIRMNNVKNI---LEIGTAIGYSSMQFASISDDIHVTTIE--RNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp HHHHHHHHHHHHTCCEE---EEECCSSSHHHHHHHTTCTTCEEEEEE--CCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred HHHHHHHHHhhcCCCEE---EEEeCchhHHHHHHHHhCCCCEEEEEE--CCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 33445555555555555 9999999999999999 567888855 4344444322 223 47889998766
Q ss_pred C-C-CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc
Q 047630 292 L-P-FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 292 L-p-f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~ 341 (392)
. + ..+++||+|++.... .....+++++.++|||||+|++++...
T Consensus 134 ~~~~~~~~~fD~V~~~~~~------~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 134 QFENVNDKVYDMIFIDAAK------AQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp CHHHHTTSCEEEEEEETTS------SSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred HHHhhccCCccEEEEcCcH------HHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 4 4 447899999976433 334579999999999999999987543
No 163
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.08 E-value=3.4e-10 Score=109.60 Aligned_cols=127 Identities=17% Similarity=0.187 Sum_probs=84.9
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc----------CCccEEEeccCcCCC--CCCcccEEE
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR----------GVVPLYISISQRLPF--FDNTLDIVH 303 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r----------g~i~~~~~d~~~Lpf--~d~sFDlV~ 303 (392)
..|||||||+|.++..+++. ...++++|+| ....+.+.++ ..+.++.+|...++. .+++||+|+
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid--~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 97 ERVLIIGGGDGGVLREVLRHGTVEHCDLVDID--GEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp CEEEEEECTTSHHHHHHHTCTTCCEEEEEESC--HHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CeEEEEcCCCCHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 44599999999999999986 3578885544 3443332221 236788898777654 478999999
Q ss_pred EcccccccCCchhH--HHHHHHHHHcccCCcEEEEEeecc-cccchHHHHHHHHHHcCCeEEEEEEe
Q 047630 304 SMHVLSNWIPTTLL--HFLMFDIYRVLRPGGLFWLDHFFC-VGAQLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 304 s~~~l~~~~~~~~l--~~~L~el~RvLKPGG~lii~~~~~-~~~~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
+....+. .+...+ ..+++++.|+|||||+|++..... ......+.+.+.++++||..+.....
T Consensus 175 ~d~~~~~-~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 175 IDTTDPA-GPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALM 240 (304)
T ss_dssp EECC----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred ECCCCcc-ccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEe
Confidence 9765533 222222 478999999999999998874321 11223456888899999988765533
No 164
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.08 E-value=1.5e-10 Score=106.06 Aligned_cols=96 Identities=18% Similarity=0.221 Sum_probs=71.9
Q ss_pred hhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----CCccEEEeccCcCCCCCCcccEEEEc
Q 047630 230 ATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----GVVPLYISISQRLPFFDNTLDIVHSM 305 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g~i~~~~~d~~~Lpf~d~sFDlV~s~ 305 (392)
.+.++.+| ||+|||+|.++..+++.+..++++| ++....+.+.++ +.+.++.+|.......+++||+|++.
T Consensus 67 ~~~~~~~v---LdiG~G~G~~~~~l~~~~~~v~~vD--~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 141 (231)
T 1vbf_A 67 DLHKGQKV---LEIGTGIGYYTALIAEIVDKVVSVE--INEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVW 141 (231)
T ss_dssp TCCTTCEE---EEECCTTSHHHHHHHHHSSEEEEEE--SCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEES
T ss_pred CCCCCCEE---EEEcCCCCHHHHHHHHHcCEEEEEe--CCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEEC
Confidence 34444555 9999999999999999888888855 434444444333 24678888877633356789999999
Q ss_pred ccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 306 HVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 306 ~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
.+++++. .++.++|||||++++...
T Consensus 142 ~~~~~~~---------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 142 ATAPTLL---------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp SBBSSCC---------HHHHHTEEEEEEEEEEEC
T ss_pred CcHHHHH---------HHHHHHcCCCcEEEEEEc
Confidence 9998752 478899999999988864
No 165
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.07 E-value=3.7e-10 Score=105.39 Aligned_cols=145 Identities=11% Similarity=0.074 Sum_probs=83.9
Q ss_pred HHHHHHHHHhhCCCC--cccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHH----HhcC---CccEEEecc
Q 047630 221 LDFSIDEVLATKKPG--TIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFI----ASRG---VVPLYISIS 289 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~--~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~a----a~rg---~i~~~~~d~ 289 (392)
...++..++...+.. .-..|||+|||+|.++..++++ +..++++|++ ..+.+.+ ...+ .+.++++|+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (254)
T 2h00_A 48 YIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVD--DMCFNYAKKNVEQNNLSDLIKVVKVPQ 125 (254)
T ss_dssp HHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECC--HHHHHHHHHHHHHcCCCccEEEEEcch
Confidence 445666666543211 1234599999999999988875 6788885544 3444322 2233 268888887
Q ss_pred CcC---CCC---CCcccEEEEcccccccCC------------chhHHHHHHHHHHcccCCcEEEEEeec-----------
Q 047630 290 QRL---PFF---DNTLDIVHSMHVLSNWIP------------TTLLHFLMFDIYRVLRPGGLFWLDHFF----------- 340 (392)
Q Consensus 290 ~~L---pf~---d~sFDlV~s~~~l~~~~~------------~~~l~~~L~el~RvLKPGG~lii~~~~----------- 340 (392)
... +++ +++||+|+++..+++... ......++.+++|+|||||.+.+.+..
T Consensus 126 ~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~ 205 (254)
T 2h00_A 126 KTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRL 205 (254)
T ss_dssp TCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGB
T ss_pred hhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccce
Confidence 652 444 368999999866654320 011124567777888887766332110
Q ss_pred ------ccccchHHHHHHHHHHcCCeEEEEEEe
Q 047630 341 ------CVGAQLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 341 ------~~~~~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
.......+.+.++++++||+.++....
T Consensus 206 g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 206 RWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp SCEEEEESSTTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHHcCCCceEEEEE
Confidence 000111256888999999998877644
No 166
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.07 E-value=6.8e-10 Score=106.01 Aligned_cols=136 Identities=13% Similarity=0.083 Sum_probs=84.8
Q ss_pred HHHHHHHHHhh---CCCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEec-CCCchhHHHHHh---------cC------
Q 047630 221 LDFSIDEVLAT---KKPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSM-NLNGPFNNFIAS---------RG------ 280 (392)
Q Consensus 221 ~~~lI~~ll~l---~~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~i-D~~a~~~~~aa~---------rg------ 280 (392)
...+++.+... .++.+| ||+|||+|.++..+++.+. .|+++|+ + ....+.+.+ .+
T Consensus 64 ~~~l~~~l~~~~~~~~~~~v---LDlG~G~G~~~~~~a~~~~~~v~~~D~s~--~~~~~~a~~n~~~N~~~~~~~~~~~~ 138 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTV---CELGAGAGLVSIVAFLAGADQVVATDYPD--PEILNSLESNIREHTANSCSSETVKR 138 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEE---EETTCTTSHHHHHHHHTTCSEEEEEECSC--HHHHHHHHHHHHTTCC----------
T ss_pred HHHHHHHHHhcchhcCCCeE---EEecccccHHHHHHHHcCCCEEEEEeCCC--HHHHHHHHHHHHHhhhhhcccccCCC
Confidence 44455555432 334444 9999999999999999887 8999665 3 333332211 11
Q ss_pred -CccEEEeccCc----CCC--CCCcccEEEEcccccccCCchhHHHHHHHHHHccc---C--CcEEEEEeec-ccc-cch
Q 047630 281 -VVPLYISISQR----LPF--FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLR---P--GGLFWLDHFF-CVG-AQL 346 (392)
Q Consensus 281 -~i~~~~~d~~~----Lpf--~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLK---P--GG~lii~~~~-~~~-~~l 346 (392)
.+.+...+..+ +.. .+++||+|++..++++. .....+++++.++|| | ||.+++.-.. ... ...
T Consensus 139 ~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~---~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~ 215 (281)
T 3bzb_A 139 ASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFH---QAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAER 215 (281)
T ss_dssp CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCG---GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------
T ss_pred CCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccCh---HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchh
Confidence 24444333222 110 36789999999998775 556789999999999 9 9987664211 110 011
Q ss_pred HHHHHHHHHHcC-CeEEEE
Q 047630 347 EDVYVPLIESVG-FNKLKW 364 (392)
Q Consensus 347 ~~~l~~ll~~aG-f~~i~w 364 (392)
...+.+.+++.| |+....
T Consensus 216 ~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 216 DLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp CTHHHHHHHHSTTEEEEEE
T ss_pred HHHHHHHHHhcCCEEEEEe
Confidence 233566888999 987755
No 167
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.06 E-value=1e-09 Score=100.11 Aligned_cols=111 Identities=11% Similarity=0.030 Sum_probs=77.3
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHH----HhcC---CccEEEeccC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFI----ASRG---VVPLYISISQ 290 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~a----a~rg---~i~~~~~d~~ 290 (392)
...++..+....++.+| ||||||+|..+..+++. +..++++|++ ....+.+ .+.+ .+.++++|+.
T Consensus 46 ~~~~l~~l~~~~~~~~v---LdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (223)
T 3duw_A 46 QGKFLQLLVQIQGARNI---LEIGTLGGYSTIWLARGLSSGGRVVTLEAS--EKHADIARSNIERANLNDRVEVRTGLAL 120 (223)
T ss_dssp HHHHHHHHHHHHTCSEE---EEECCTTSHHHHHHHTTCCSSCEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred HHHHHHHHHHhhCCCEE---EEecCCccHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 34455566555555566 99999999999999996 6788885544 3444322 2223 3678888865
Q ss_pred cC-C-CC---CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc
Q 047630 291 RL-P-FF---DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342 (392)
Q Consensus 291 ~L-p-f~---d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~ 342 (392)
.. + +. .++||+|++.... .....++.++.++|||||++++++....
T Consensus 121 ~~~~~~~~~~~~~fD~v~~d~~~------~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 121 DSLQQIENEKYEPFDFIFIDADK------QNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp HHHHHHHHTTCCCCSEEEECSCG------GGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred HHHHHHHhcCCCCcCEEEEcCCc------HHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 43 1 11 2679999987553 3345799999999999999999876543
No 168
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.06 E-value=1.9e-09 Score=105.88 Aligned_cols=124 Identities=9% Similarity=-0.000 Sum_probs=82.7
Q ss_pred EEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHH----HhcC----CccEEEeccCcCCC----CCCcccEEEEccc
Q 047630 240 GLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFI----ASRG----VVPLYISISQRLPF----FDNTLDIVHSMHV 307 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~a----a~rg----~i~~~~~d~~~Lpf----~d~sFDlV~s~~~ 307 (392)
|||+|||+|.++..+++.+..|++ +|++....+.+ ...+ .+.++++|+..+.. .+++||+|++...
T Consensus 157 VLDlgcGtG~~sl~la~~ga~V~~--VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP 234 (332)
T 2igt_A 157 VLNLFGYTGVASLVAAAAGAEVTH--VDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPP 234 (332)
T ss_dssp EEEETCTTCHHHHHHHHTTCEEEE--ECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCC
T ss_pred EEEcccccCHHHHHHHHcCCEEEE--EECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECCc
Confidence 499999999999999999888888 55544444322 2223 26788888766432 1578999999643
Q ss_pred ccccC-------CchhHHHHHHHHHHcccCCcEEEEEeecccc---cchHHHHHHHHHHcCCeEEEEE
Q 047630 308 LSNWI-------PTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG---AQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 308 l~~~~-------~~~~l~~~L~el~RvLKPGG~lii~~~~~~~---~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
..... .......++.++.++|||||+|++....... +.+.+.+.+.+.++|++.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~~~e 302 (332)
T 2igt_A 235 KFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVASGE 302 (332)
T ss_dssp SEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEEEEE
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 21111 1234567999999999999998877654433 2234444555557888766444
No 169
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.06 E-value=3.6e-10 Score=111.34 Aligned_cols=99 Identities=13% Similarity=0.156 Sum_probs=73.7
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHH----HhcC---CccEEEeccCcCCCCCCcccEE
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFI----ASRG---VVPLYISISQRLPFFDNTLDIV 302 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~a----a~rg---~i~~~~~d~~~Lpf~d~sFDlV 302 (392)
..++.+| ||||||+|.++..+++.+. .|+++|++ ++...+ .+.+ .+.++.++.+.++++ ++||+|
T Consensus 48 ~~~~~~V---LDiGcGtG~ls~~la~~g~~~V~~vD~s---~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~I 120 (348)
T 2y1w_A 48 DFKDKIV---LDVGCGSGILSFFAAQAGARKIYAVEAS---TMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDII 120 (348)
T ss_dssp GTTTCEE---EEETCTTSHHHHHHHHTTCSEEEEEECS---THHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEE
T ss_pred cCCcCEE---EEcCCCccHHHHHHHhCCCCEEEEECCH---HHHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEE
Confidence 3444444 9999999999999999865 89886654 233322 2223 378899999988765 579999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
++...++++.. +.....+.++.|+|||||++++.
T Consensus 121 vs~~~~~~~~~-~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 121 ISEPMGYMLFN-ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EECCCBTTBTT-TSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEeCchhcCCh-HHHHHHHHHHHhhcCCCeEEEEe
Confidence 99988877644 33456788999999999999755
No 170
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.05 E-value=4.1e-09 Score=98.34 Aligned_cols=131 Identities=11% Similarity=0.036 Sum_probs=92.7
Q ss_pred HHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCC--EEEEEecCCCchhHH----HHHhcC---CccEEEeccCcCCC
Q 047630 224 SIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNI--TIVTTSMNLNGPFNN----FIASRG---VVPLYISISQRLPF 294 (392)
Q Consensus 224 lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~--~vvg~~iD~~a~~~~----~aa~rg---~i~~~~~d~~~Lpf 294 (392)
.+..+....+.+ .+|||||||+|.++..+++.+. .|+++|+|. ...+ .+...+ .+.+..+|......
T Consensus 11 RL~~i~~~v~~g--~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~--~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~ 86 (230)
T 3lec_A 11 RLQKVANYVPKG--ARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVN--GPYQSALKNVSEHGLTSKIDVRLANGLSAFE 86 (230)
T ss_dssp HHHHHHTTSCTT--EEEEEETCSTTHHHHHHHHTTCEEEEEEEESSH--HHHHHHHHHHHHTTCTTTEEEEECSGGGGCC
T ss_pred HHHHHHHhCCCC--CEEEEECCchHHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHHHHHcCCCCcEEEEECchhhccc
Confidence 345555544333 2349999999999999999875 467755443 3333 333444 37888999777655
Q ss_pred CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEee
Q 047630 295 FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 295 ~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
+++.||+|+.....- +.+..++.+..+.|+++|+|++..... .+.+++++.+.||..++-..+.
T Consensus 87 ~~~~~D~IviaGmGg-----~lI~~IL~~~~~~l~~~~~lIlqp~~~-----~~~lr~~L~~~Gf~i~~E~lv~ 150 (230)
T 3lec_A 87 EADNIDTITICGMGG-----RLIADILNNDIDKLQHVKTLVLQPNNR-----EDDLRKWLAANDFEIVAEDILT 150 (230)
T ss_dssp GGGCCCEEEEEEECH-----HHHHHHHHHTGGGGTTCCEEEEEESSC-----HHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccccCEEEEeCCch-----HHHHHHHHHHHHHhCcCCEEEEECCCC-----hHHHHHHHHHCCCEEEEEEEEE
Confidence 555799988654321 345678999999999999999987432 4568889999999999877664
No 171
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.04 E-value=1.5e-09 Score=106.94 Aligned_cols=125 Identities=15% Similarity=0.095 Sum_probs=86.8
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHcC---CEEEEEecCCCchhHH----HHHhcC--CccEEEeccCcCCCCCCcccE
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMERN---ITIVTTSMNLNGPFNN----FIASRG--VVPLYISISQRLPFFDNTLDI 301 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~g---~~vvg~~iD~~a~~~~----~aa~rg--~i~~~~~d~~~Lpf~d~sFDl 301 (392)
..++..+ ||+|||+|.++..++..+ ..++|+|+|. .+.+ .+...| .+.+.++|+..++.+.+.||+
T Consensus 201 ~~~~~~v---LD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~--~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~ 275 (354)
T 3tma_A 201 ARPGMRV---LDPFTGSGTIALEAASTLGPTSPVYAGDLDE--KRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDR 275 (354)
T ss_dssp CCTTCCE---EESSCTTSHHHHHHHHHHCTTSCEEEEESCH--HHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSE
T ss_pred CCCCCEE---EeCCCCcCHHHHHHHHhhCCCceEEEEECCH--HHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCE
Confidence 3444455 999999999999999854 7888866543 4433 233334 478999999999887888999
Q ss_pred EEEcccccccCC-ch----hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEe
Q 047630 302 VHSMHVLSNWIP-TT----LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 302 V~s~~~l~~~~~-~~----~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
|+++..+..... .. ....+++++.++|||||.+++.... .+.+.+..+ .||+..+-...
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~------~~~~~~~~~-~g~~~~~~~~l 339 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR------PALLKRALP-PGFALRHARVV 339 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC------HHHHHHHCC-TTEEEEEEEEC
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC------HHHHHHHhh-cCcEEEEEEEE
Confidence 999866533221 11 1257899999999999999887532 122444555 88887765544
No 172
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.04 E-value=8.6e-10 Score=104.11 Aligned_cols=118 Identities=13% Similarity=0.153 Sum_probs=81.3
Q ss_pred hhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHHh----c-C----CccEEEeccCcCCCCCC
Q 047630 230 ATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIAS----R-G----VVPLYISISQRLPFFDN 297 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~----r-g----~i~~~~~d~~~Lpf~d~ 297 (392)
.+.++.+| ||+|||+|.++..+++. +..+++ +|++....+.+.+ . + .+.+..+|+...+++++
T Consensus 96 ~~~~~~~v---LdiG~G~G~~~~~l~~~~~~~~~v~~--vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~ 170 (280)
T 1i9g_A 96 DIFPGARV---LEAGAGSGALTLSLLRAVGPAGQVIS--YEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDG 170 (280)
T ss_dssp TCCTTCEE---EEECCTTSHHHHHHHHHHCTTSEEEE--ECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTT
T ss_pred CCCCCCEE---EEEcccccHHHHHHHHHhCCCCEEEE--EeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCC
Confidence 34455555 99999999999999985 568888 5554444443322 2 3 46788899888888888
Q ss_pred cccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHH-cCCeEEE
Q 047630 298 TLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIES-VGFNKLK 363 (392)
Q Consensus 298 sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~-aGf~~i~ 363 (392)
+||+|++... ++. .++.++.++|||||++++..... +...+ +.+.+++ .||..++
T Consensus 171 ~~D~v~~~~~-----~~~---~~l~~~~~~L~pgG~l~~~~~~~--~~~~~-~~~~l~~~~~f~~~~ 226 (280)
T 1i9g_A 171 SVDRAVLDML-----APW---EVLDAVSRLLVAGGVLMVYVATV--TQLSR-IVEALRAKQCWTEPR 226 (280)
T ss_dssp CEEEEEEESS-----CGG---GGHHHHHHHEEEEEEEEEEESSH--HHHHH-HHHHHHHHSSBCCCE
T ss_pred ceeEEEECCc-----CHH---HHHHHHHHhCCCCCEEEEEeCCH--HHHHH-HHHHHHhcCCcCCcE
Confidence 9999998321 222 48999999999999998876432 23333 3444555 7776543
No 173
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.03 E-value=4.8e-10 Score=102.35 Aligned_cols=110 Identities=15% Similarity=0.162 Sum_probs=76.7
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHH----hcC---CccEEEeccC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQ 290 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~ 290 (392)
...++..++...++.+| ||||||+|..+..+++. +..++++|++ ....+.+. +.+ .+.++++++.
T Consensus 52 ~~~~l~~l~~~~~~~~v---LdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (225)
T 3tr6_A 52 QAQLLALLVKLMQAKKV---IDIGTFTGYSAIAMGLALPKDGTLITCDVD--EKSTALAKEYWEKAGLSDKIGLRLSPAK 126 (225)
T ss_dssp HHHHHHHHHHHHTCSEE---EEECCTTSHHHHHHHTTCCTTCEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred HHHHHHHHHHhhCCCEE---EEeCCcchHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHHCCCCCceEEEeCCHH
Confidence 34455666655555555 99999999999999986 6788885543 34443322 223 3678888864
Q ss_pred cC-CC-CC----CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc
Q 047630 291 RL-PF-FD----NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 291 ~L-pf-~d----~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~ 341 (392)
.. +. .. ++||+|++... ......+++++.++|||||+|++++...
T Consensus 127 ~~~~~~~~~~~~~~fD~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 127 DTLAELIHAGQAWQYDLIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp HHHHHHHTTTCTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHHHhhhccCCCCccEEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 43 22 11 78999996553 2344679999999999999999998653
No 174
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.03 E-value=4.3e-10 Score=101.96 Aligned_cols=99 Identities=12% Similarity=0.072 Sum_probs=71.0
Q ss_pred CCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHH----hcC--CccEEEeccCc-CCCCCCcccEEEE
Q 047630 233 KPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIA----SRG--VVPLYISISQR-LPFFDNTLDIVHS 304 (392)
Q Consensus 233 ~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa----~rg--~i~~~~~d~~~-Lpf~d~sFDlV~s 304 (392)
++.+| ||+|||+|.++..+++++. .|++ +|++..+.+.+. ..+ .+.++++|+.. ++..+++||+|++
T Consensus 54 ~~~~v---LDlgcG~G~~~~~l~~~~~~~V~~--vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQC---LDCFAGSGALGLEALSRYAAGATL--IEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEE---EETTCTTCHHHHHHHHTTCSEEEE--ECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeE---EEeCCCcCHHHHHHHhcCCCEEEE--EECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 34455 9999999999998888774 7888 555444444332 233 36788888766 5666789999999
Q ss_pred cccccccCCchhHHHHHHHHHH--cccCCcEEEEEeec
Q 047630 305 MHVLSNWIPTTLLHFLMFDIYR--VLRPGGLFWLDHFF 340 (392)
Q Consensus 305 ~~~l~~~~~~~~l~~~L~el~R--vLKPGG~lii~~~~ 340 (392)
...++ . .....+++++.+ +|||||++++....
T Consensus 129 ~~p~~-~---~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 129 DPPFR-R---GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CCSSS-T---TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCCC-C---CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 87754 2 334567888865 69999999988654
No 175
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.03 E-value=2.8e-10 Score=100.37 Aligned_cols=97 Identities=11% Similarity=0.003 Sum_probs=67.8
Q ss_pred EEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHHHHH----hcC---CccEEEeccCcC----CCCCCcccEEEEcc
Q 047630 239 IGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQRL----PFFDNTLDIVHSMH 306 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~~L----pf~d~sFDlV~s~~ 306 (392)
.|||+|||+|.++..+++.+ ..++++|+| ....+.+. ..+ .+.++.+|+... ++.+++||+|++..
T Consensus 47 ~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~ 124 (187)
T 2fhp_A 47 MALDLYSGSGGLAIEAVSRGMDKSICIEKN--FAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDP 124 (187)
T ss_dssp EEEETTCTTCHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CEEEeCCccCHHHHHHHHcCCCEEEEEECC--HHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECC
Confidence 34999999999999888876 588885544 34443222 223 267888887653 23368899999987
Q ss_pred cccccCCchhHHHHHHHH--HHcccCCcEEEEEeecc
Q 047630 307 VLSNWIPTTLLHFLMFDI--YRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 307 ~l~~~~~~~~l~~~L~el--~RvLKPGG~lii~~~~~ 341 (392)
.++. ...+.++..+ .++|||||++++.....
T Consensus 125 ~~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 125 PYAK----QEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp CGGG----CCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCc----hhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 7542 2233566666 89999999999886543
No 176
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.03 E-value=1.6e-09 Score=102.75 Aligned_cols=119 Identities=14% Similarity=0.160 Sum_probs=82.6
Q ss_pred hhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHHhc----C---CccEEEeccCcCCCCCCcc
Q 047630 230 ATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIASR----G---VVPLYISISQRLPFFDNTL 299 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~r----g---~i~~~~~d~~~Lpf~d~sF 299 (392)
.+.++.+| ||+|||+|.++..+++. +..+++ +|++....+.+.++ + .+.+..+|+... +++++|
T Consensus 109 ~~~~~~~V---LDiG~G~G~~~~~la~~~~~~~~v~~--vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~ 182 (277)
T 1o54_A 109 DVKEGDRI---IDTGVGSGAMCAVLARAVGSSGKVFA--YEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDV 182 (277)
T ss_dssp TCCTTCEE---EEECCTTSHHHHHHHHHTTTTCEEEE--ECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSE
T ss_pred CCCCCCEE---EEECCcCCHHHHHHHHHhCCCcEEEE--EECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCcc
Confidence 34444555 99999999999999986 467877 55544444433322 3 267788887765 667889
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEE
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
|+|++.. ... ..++.++.++|||||.+++..... +.. ..+.+.+++.||..++..
T Consensus 183 D~V~~~~-----~~~---~~~l~~~~~~L~pgG~l~~~~~~~--~~~-~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 183 DALFLDV-----PDP---WNYIDKCWEALKGGGRFATVCPTT--NQV-QETLKKLQELPFIRIEVW 237 (277)
T ss_dssp EEEEECC-----SCG---GGTHHHHHHHEEEEEEEEEEESSH--HHH-HHHHHHHHHSSEEEEEEE
T ss_pred CEEEECC-----cCH---HHHHHHHHHHcCCCCEEEEEeCCH--HHH-HHHHHHHHHCCCceeEEE
Confidence 9999842 112 258999999999999998876422 222 346667888999877543
No 177
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.02 E-value=4.2e-10 Score=103.63 Aligned_cols=109 Identities=21% Similarity=0.246 Sum_probs=78.0
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc----C---CccEEEeccCc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR----G---VVPLYISISQR 291 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r----g---~i~~~~~d~~~ 291 (392)
...++..++...++.+| ||+|||+|.++..+++. +..+++ +|++....+.+.++ + .+.++.+|...
T Consensus 42 ~~~~l~~~~~~~~~~~v---LdiG~G~G~~~~~la~~~~~~~v~~--vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 116 (233)
T 2gpy_A 42 GMESLLHLLKMAAPARI---LEIGTAIGYSAIRMAQALPEATIVS--IERDERRYEEAHKHVKALGLESRIELLFGDALQ 116 (233)
T ss_dssp HHHHHHHHHHHHCCSEE---EEECCTTSHHHHHHHHHCTTCEEEE--ECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGG
T ss_pred HHHHHHHHHhccCCCEE---EEecCCCcHHHHHHHHHCCCCEEEE--EECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 34455555555555555 99999999999999986 578888 55544444433332 3 36788888766
Q ss_pred C-CCC--CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec
Q 047630 292 L-PFF--DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 292 L-pf~--d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~ 340 (392)
. +.. +++||+|++..... ....+++++.++|||||++++.++.
T Consensus 117 ~~~~~~~~~~fD~I~~~~~~~------~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 117 LGEKLELYPLFDVLFIDAAKG------QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp SHHHHTTSCCEEEEEEEGGGS------CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred HHHhcccCCCccEEEECCCHH------HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 4 433 57899999876653 3457999999999999999998654
No 178
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.02 E-value=5e-09 Score=106.04 Aligned_cols=158 Identities=13% Similarity=0.064 Sum_probs=100.3
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhHH----HHHhcC-CccEEEeccCcCC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFNN----FIASRG-VVPLYISISQRLP 293 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~~----~aa~rg-~i~~~~~d~~~Lp 293 (392)
...++..++...++.+| ||+|||+|..+..+++.. ..++++|++. .... .+.+.| .+.++++|...++
T Consensus 234 ~s~~~~~~l~~~~g~~V---LDlgaG~G~~t~~la~~~~~~~v~a~D~~~--~~l~~~~~~~~~~g~~~~~~~~D~~~~~ 308 (429)
T 1sqg_A 234 SAQGCMTWLAPQNGEHI---LDLCAAPGGKTTHILEVAPEAQVVAVDIDE--QRLSRVYDNLKRLGMKATVKQGDGRYPS 308 (429)
T ss_dssp HHHTHHHHHCCCTTCEE---EEESCTTCHHHHHHHHHCTTCEEEEEESST--TTHHHHHHHHHHTTCCCEEEECCTTCTH
T ss_pred HHHHHHHHcCCCCcCeE---EEECCCchHHHHHHHHHcCCCEEEEECCCH--HHHHHHHHHHHHcCCCeEEEeCchhhch
Confidence 44455566666666666 999999999999999854 5888866554 3333 223334 2678888888776
Q ss_pred --CCCCcccEEEEcc------cccccCCc-------hhH-------HHHHHHHHHcccCCcEEEEEeecccccchHHHHH
Q 047630 294 --FFDNTLDIVHSMH------VLSNWIPT-------TLL-------HFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYV 351 (392)
Q Consensus 294 --f~d~sFDlV~s~~------~l~~~~~~-------~~l-------~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~ 351 (392)
+++++||+|++.. ++++ .++ .++ ..++.++.++|||||++++.+.....++..+.+.
T Consensus 309 ~~~~~~~fD~Vl~D~Pcsg~g~~~~-~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~ 387 (429)
T 1sqg_A 309 QWCGEQQFDRILLDAPCSATGVIRR-HPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIK 387 (429)
T ss_dssp HHHTTCCEEEEEEECCCCCGGGTTT-CTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHH
T ss_pred hhcccCCCCEEEEeCCCCcccccCC-CcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHH
Confidence 5668899999732 2222 111 111 4789999999999999999875443344445566
Q ss_pred HHHHHc-CCeEEE--------EEEeeccCCCCcccceeeEEEEEcC
Q 047630 352 PLIESV-GFNKLK--------WVVGRKLDRGPELREMYLSALLEKP 388 (392)
Q Consensus 352 ~ll~~a-Gf~~i~--------w~~~~k~d~~~~~~e~ylsai~~Kp 388 (392)
..+++. +|+.+. +.... .....+.|+.++++|.
T Consensus 388 ~~l~~~~~~~~~~~~~~~~~~~~~~P----~~~~~dGff~a~l~k~ 429 (429)
T 1sqg_A 388 AFLQRTADAELCETGTPEQPGKQNLP----GAEEGDGFFYAKLIKK 429 (429)
T ss_dssp HHHHHCTTCEECSSBCSSSBSEEECC----CTTSCCSEEEEEEEC-
T ss_pred HHHHhCCCCEEeCCCCCCCCeEEECC----CCCCCCceEEEEEEEC
Confidence 677664 576653 11111 1123344556888874
No 179
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.02 E-value=6.4e-10 Score=110.95 Aligned_cols=98 Identities=9% Similarity=0.100 Sum_probs=70.8
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHH----HHhcC-----CccEEEeccCcCCCCCCcccEEEEcc
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNF----IASRG-----VVPLYISISQRLPFFDNTLDIVHSMH 306 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~----aa~rg-----~i~~~~~d~~~Lpf~d~sFDlV~s~~ 306 (392)
..|||+|||+|.++..+++. +..++++|++ ..+.+. +...+ .+.++.+|... ++++++||+|+++.
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s--~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~np 300 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDES--PMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNP 300 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESC--HHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECc--HHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECC
Confidence 34599999999999999997 5788885544 344432 22233 25668888776 56778999999998
Q ss_pred ccccc--CCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 307 VLSNW--IPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 307 ~l~~~--~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
.+|+. ........+++++.++|||||++++..
T Consensus 301 pfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 301 PFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp CC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 88752 233444578999999999999999865
No 180
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.02 E-value=5.4e-09 Score=98.36 Aligned_cols=131 Identities=11% Similarity=-0.021 Sum_probs=91.5
Q ss_pred HHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCC--EEEEEecCCCchhHH----HHHhcCC---ccEEEeccCcCCC
Q 047630 224 SIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNI--TIVTTSMNLNGPFNN----FIASRGV---VPLYISISQRLPF 294 (392)
Q Consensus 224 lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~--~vvg~~iD~~a~~~~----~aa~rg~---i~~~~~d~~~Lpf 294 (392)
-+..+....+.+ ..|||||||+|.++..+++.+. .|+++|+|. ...+ .+...|+ +.+..+|......
T Consensus 11 RL~~i~~~v~~g--~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~--~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~ 86 (244)
T 3gnl_A 11 RLEKVASYITKN--ERIADIGSDHAYLPCFAVKNQTASFAIAGEVVD--GPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE 86 (244)
T ss_dssp HHHHHHTTCCSS--EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSH--HHHHHHHHHHHHTTCTTTEEEEECSGGGGCC
T ss_pred HHHHHHHhCCCC--CEEEEECCccHHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHHHHHcCCCceEEEEecchhhccC
Confidence 345555544432 2349999999999999999875 567755443 3333 3333443 6888898776554
Q ss_pred CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEee
Q 047630 295 FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 295 ~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
++..||+|+..... .+.+..++.+..+.|+++|+|++..... .+.+++++.+.||..+.-..+.
T Consensus 87 ~~~~~D~IviagmG-----g~lI~~IL~~~~~~L~~~~~lIlq~~~~-----~~~lr~~L~~~Gf~i~~E~lv~ 150 (244)
T 3gnl_A 87 KKDAIDTIVIAGMG-----GTLIRTILEEGAAKLAGVTKLILQPNIA-----AWQLREWSEQNNWLITSEAILR 150 (244)
T ss_dssp GGGCCCEEEEEEEC-----HHHHHHHHHHTGGGGTTCCEEEEEESSC-----HHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccccccEEEEeCCc-----hHHHHHHHHHHHHHhCCCCEEEEEcCCC-----hHHHHHHHHHCCCEEEEEEEEE
Confidence 44469998875432 1345678999999999999999997432 4558889999999998877664
No 181
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.01 E-value=3.9e-09 Score=107.60 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=92.5
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc--C-CEEEEEecCCCchhHHHH----HhcC--CccEEEeccCc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER--N-ITIVTTSMNLNGPFNNFI----ASRG--VVPLYISISQR 291 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~--g-~~vvg~~iD~~a~~~~~a----a~rg--~i~~~~~d~~~ 291 (392)
...++..++...++.+| ||+|||+|..+..+++. + ..+++ +|++......+ .+.| .+.++++|...
T Consensus 247 ~s~l~~~~l~~~~g~~V---LDlgaG~G~~t~~la~~~~~~~~v~a--~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~ 321 (450)
T 2yxl_A 247 ASAVASIVLDPKPGETV---VDLAAAPGGKTTHLAELMKNKGKIYA--FDVDKMRMKRLKDFVKRMGIKIVKPLVKDARK 321 (450)
T ss_dssp HHHHHHHHHCCCTTCEE---EESSCTTCHHHHHHHHHTTTCSEEEE--ECSCHHHHHHHHHHHHHTTCCSEEEECSCTTC
T ss_pred hhHHHHHhcCCCCcCEE---EEeCCCccHHHHHHHHHcCCCCEEEE--EcCCHHHHHHHHHHHHHcCCCcEEEEEcChhh
Confidence 45556666666666666 99999999999999983 3 57888 55544444432 2234 26778888887
Q ss_pred CC--CCCCcccEEEEc------ccccccCCc-------hhH-------HHHHHHHHHcccCCcEEEEEeecccccchHHH
Q 047630 292 LP--FFDNTLDIVHSM------HVLSNWIPT-------TLL-------HFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDV 349 (392)
Q Consensus 292 Lp--f~d~sFDlV~s~------~~l~~~~~~-------~~l-------~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~ 349 (392)
++ +.+++||+|++. .++++ .++ .++ ..++.++.++|||||++++.+.....++..+.
T Consensus 322 ~~~~~~~~~fD~Vl~D~Pcsg~g~~~~-~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~ 400 (450)
T 2yxl_A 322 APEIIGEEVADKVLLDAPCTSSGTIGK-NPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKN 400 (450)
T ss_dssp CSSSSCSSCEEEEEEECCCCCGGGTTT-STTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHH
T ss_pred cchhhccCCCCEEEEcCCCCCCeeecc-ChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHH
Confidence 76 555789999962 22222 111 111 57899999999999999988765544444556
Q ss_pred HHHHHHHc-CCeEEE
Q 047630 350 YVPLIESV-GFNKLK 363 (392)
Q Consensus 350 l~~ll~~a-Gf~~i~ 363 (392)
+...+++. ||+.+.
T Consensus 401 v~~~l~~~~~~~~~~ 415 (450)
T 2yxl_A 401 IRWFLNVHPEFKLVP 415 (450)
T ss_dssp HHHHHHHCSSCEECC
T ss_pred HHHHHHhCCCCEEee
Confidence 77777775 677653
No 182
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.00 E-value=5.1e-10 Score=97.09 Aligned_cols=99 Identities=13% Similarity=0.169 Sum_probs=68.9
Q ss_pred CCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cC-CccEEEeccCcC-CC---CCCcccEEE
Q 047630 233 KPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RG-VVPLYISISQRL-PF---FDNTLDIVH 303 (392)
Q Consensus 233 ~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg-~i~~~~~d~~~L-pf---~d~sFDlV~ 303 (392)
++.++ ||+|||+|.++..+++.+..+++ +|++....+.+.+ .+ .+.++.+|+... +. .+++||+|+
T Consensus 41 ~~~~v---LD~GcG~G~~~~~l~~~~~~v~~--vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~ 115 (171)
T 1ws6_A 41 RRGRF---LDPFAGSGAVGLEAASEGWEAVL--VEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAF 115 (171)
T ss_dssp TCCEE---EEETCSSCHHHHHHHHTTCEEEE--ECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeE---EEeCCCcCHHHHHHHHCCCeEEE--EeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEE
Confidence 44455 99999999999999999988887 5554444443322 23 467888887653 22 134899999
Q ss_pred EcccccccCCchhHHHHHHHHH--HcccCCcEEEEEeecc
Q 047630 304 SMHVLSNWIPTTLLHFLMFDIY--RVLRPGGLFWLDHFFC 341 (392)
Q Consensus 304 s~~~l~~~~~~~~l~~~L~el~--RvLKPGG~lii~~~~~ 341 (392)
+...++ .... .+++.+. ++|||||++++.....
T Consensus 116 ~~~~~~--~~~~---~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 116 MAPPYA--MDLA---ALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp ECCCTT--SCTT---HHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred ECCCCc--hhHH---HHHHHHHhhcccCCCcEEEEEeCCc
Confidence 997765 2222 3556665 9999999999887544
No 183
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.99 E-value=5.3e-10 Score=108.50 Aligned_cols=96 Identities=16% Similarity=0.080 Sum_probs=71.1
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcCC---EEEEEecCCCchhHHHHHh----cC--CccEEEeccCcCCCCCCcc
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERNI---TIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRLPFFDNTL 299 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g~---~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~Lpf~d~sF 299 (392)
+.+.++.+| ||||||+|.++..+++.+. .|+++| ++....+.+.+ .+ .+.+..+|....+..+++|
T Consensus 71 l~~~~~~~V---LDiGcG~G~~~~~la~~~~~~~~v~gvD--~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~f 145 (317)
T 1dl5_A 71 VGLDKGMRV---LEIGGGTGYNAAVMSRVVGEKGLVVSVE--YSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPY 145 (317)
T ss_dssp TTCCTTCEE---EEECCTTSHHHHHHHHHHCTTCEEEEEE--SCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred cCCCCcCEE---EEecCCchHHHHHHHHhcCCCCEEEEEE--CCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCe
Confidence 344555555 9999999999999998654 488855 43444443332 23 2678888988765567889
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
|+|++..+++++. .++.++|||||++++..
T Consensus 146 D~Iv~~~~~~~~~---------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 146 DVIFVTVGVDEVP---------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp EEEEECSBBSCCC---------HHHHHHEEEEEEEEEEB
T ss_pred EEEEEcCCHHHHH---------HHHHHhcCCCcEEEEEE
Confidence 9999999998752 57889999999998864
No 184
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.99 E-value=6.3e-10 Score=105.91 Aligned_cols=95 Identities=9% Similarity=-0.034 Sum_probs=66.9
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc-------C-CccEE--EeccCcCCCCCCcccEEEEcccc
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR-------G-VVPLY--ISISQRLPFFDNTLDIVHSMHVL 308 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-------g-~i~~~--~~d~~~Lpf~d~sFDlV~s~~~l 308 (392)
.|||+|||+|.++..+++. ..|+|+|++. +...+.++ + .+.++ ++|+..++ +++||+|+|..+
T Consensus 77 ~VLDlGcGtG~~s~~la~~-~~V~gvD~s~---m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~- 149 (265)
T 2oxt_A 77 RVVDLGCGRGGWSYYAASR-PHVMDVRAYT---LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG- 149 (265)
T ss_dssp EEEEESCTTSHHHHHHHTS-TTEEEEEEEC---CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC-
T ss_pred EEEEeCcCCCHHHHHHHHc-CcEEEEECch---hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc-
Confidence 3499999999999999988 6899966654 21111111 1 25677 78888876 789999999876
Q ss_pred cccCCc----hhHHHHHHHHHHcccCCc--EEEEEeec
Q 047630 309 SNWIPT----TLLHFLMFDIYRVLRPGG--LFWLDHFF 340 (392)
Q Consensus 309 ~~~~~~----~~l~~~L~el~RvLKPGG--~lii~~~~ 340 (392)
++.... .....+|.++.|+||||| .|++..+.
T Consensus 150 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 150 ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 332111 111137899999999999 99987765
No 185
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.99 E-value=1e-09 Score=99.37 Aligned_cols=97 Identities=16% Similarity=0.037 Sum_probs=69.2
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcC---CEEEEEecCCCchhHHHHHhc----C--CccEEEeccCcCCCCCCcc
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERN---ITIVTTSMNLNGPFNNFIASR----G--VVPLYISISQRLPFFDNTL 299 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g---~~vvg~~iD~~a~~~~~aa~r----g--~i~~~~~d~~~Lpf~d~sF 299 (392)
+.+.++.+| ||+|||+|.++..+++.+ ..++++| ++....+.+.++ + .+.+..+|.......+++|
T Consensus 73 ~~~~~~~~v---LdiG~G~G~~~~~l~~~~~~~~~v~~vD--~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 147 (215)
T 2yxe_A 73 LDLKPGMKV---LEIGTGCGYHAAVTAEIVGEDGLVVSIE--RIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPY 147 (215)
T ss_dssp TTCCTTCEE---EEECCTTSHHHHHHHHHHCTTSEEEEEE--SCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCE
T ss_pred hCCCCCCEE---EEECCCccHHHHHHHHHhCCCCEEEEEe--CCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCe
Confidence 334444555 999999999999999864 6888855 434444433322 2 3677788864422236789
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
|+|++..+++++. .++.++|||||++++...
T Consensus 148 D~v~~~~~~~~~~---------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 148 DRIYTTAAGPKIP---------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp EEEEESSBBSSCC---------HHHHHTEEEEEEEEEEES
T ss_pred eEEEECCchHHHH---------HHHHHHcCCCcEEEEEEC
Confidence 9999999998752 588999999999988854
No 186
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.99 E-value=6.9e-10 Score=100.59 Aligned_cols=108 Identities=12% Similarity=0.047 Sum_probs=74.9
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHH----hcC---CccEEEeccC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQ 290 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~ 290 (392)
...++..++...++.+| ||||||+|..+..+++. +..++++| ++....+.+. +.+ .+.++.+|..
T Consensus 44 ~~~~l~~l~~~~~~~~v---LdiG~G~G~~~~~la~~~~~~~~v~~vD--~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 118 (210)
T 3c3p_A 44 TGRLLYLLARIKQPQLV---VVPGDGLGCASWWFARAISISSRVVMID--PDRDNVEHARRMLHDNGLIDRVELQVGDPL 118 (210)
T ss_dssp HHHHHHHHHHHHCCSEE---EEESCGGGHHHHHHHTTSCTTCEEEEEE--SCHHHHHHHHHHHHHHSGGGGEEEEESCHH
T ss_pred HHHHHHHHHHhhCCCEE---EEEcCCccHHHHHHHHhCCCCCEEEEEE--CCHHHHHHHHHHHHHCCCCceEEEEEecHH
Confidence 34455555544444555 99999999999999985 66888855 4334443322 223 3678888876
Q ss_pred cC-CCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec
Q 047630 291 RL-PFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 291 ~L-pf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~ 340 (392)
.. +..++ ||+|++.... .....+++++.++|||||++++++..
T Consensus 119 ~~~~~~~~-fD~v~~~~~~------~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 119 GIAAGQRD-IDILFMDCDV------FNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp HHHTTCCS-EEEEEEETTT------SCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred HHhccCCC-CCEEEEcCCh------hhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 53 55556 9999987432 33457999999999999999997654
No 187
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.98 E-value=5.8e-10 Score=106.79 Aligned_cols=95 Identities=9% Similarity=-0.017 Sum_probs=67.1
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcC--------CccEE--EeccCcCCCCCCcccEEEEcccc
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRG--------VVPLY--ISISQRLPFFDNTLDIVHSMHVL 308 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg--------~i~~~--~~d~~~Lpf~d~sFDlV~s~~~l 308 (392)
.|||+|||+|.++..++++ ..|+|+|++. +...+.++. .+.++ ++|+..+| +++||+|+|..+
T Consensus 85 ~VLDlGcGtG~~s~~la~~-~~V~gVD~s~---m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~- 157 (276)
T 2wa2_A 85 TVVDLGCGRGSWSYYAASQ-PNVREVKAYT---LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDIG- 157 (276)
T ss_dssp EEEEESCTTCHHHHHHHTS-TTEEEEEEEC---CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECCC-
T ss_pred EEEEeccCCCHHHHHHHHc-CCEEEEECch---hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECCC-
Confidence 3499999999999999998 6899966654 211111111 25777 78888876 789999999876
Q ss_pred cccCCc----hhHHHHHHHHHHcccCCc--EEEEEeec
Q 047630 309 SNWIPT----TLLHFLMFDIYRVLRPGG--LFWLDHFF 340 (392)
Q Consensus 309 ~~~~~~----~~l~~~L~el~RvLKPGG--~lii~~~~ 340 (392)
+..... .....+|.++.|+||||| .|++..+.
T Consensus 158 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 158 ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 332111 111137899999999999 99987665
No 188
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.98 E-value=5.4e-10 Score=103.26 Aligned_cols=113 Identities=14% Similarity=0.165 Sum_probs=76.6
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHH----HhcC----CccEEEecc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFI----ASRG----VVPLYISIS 289 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~a----a~rg----~i~~~~~d~ 289 (392)
...++..+....+...-..|||||||+|..+..|++. +..+++ +|++....+.+ .+.+ .+.++.+|+
T Consensus 41 ~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~--vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda 118 (221)
T 3dr5_A 41 TGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTC--IDPESEHQRQAKALFREAGYSPSRVRFLLSRP 118 (221)
T ss_dssp HHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEE--ECSCHHHHHHHHHHHHHTTCCGGGEEEECSCH
T ss_pred HHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEE--EECCHHHHHHHHHHHHHcCCCcCcEEEEEcCH
Confidence 4455666665554331124499999999999999983 568888 55544444432 2222 367788876
Q ss_pred CcC-C-CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc
Q 047630 290 QRL-P-FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 290 ~~L-p-f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~ 341 (392)
..+ + +.+++||+|++.... .....+++++.++|||||++++++...
T Consensus 119 ~~~l~~~~~~~fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 119 LDVMSRLANDSYQLVFGQVSP------MDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp HHHGGGSCTTCEEEEEECCCT------TTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred HHHHHHhcCCCcCeEEEcCcH------HHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 553 2 337899999986543 233568999999999999999987543
No 189
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.98 E-value=1.4e-09 Score=104.02 Aligned_cols=106 Identities=13% Similarity=0.063 Sum_probs=72.7
Q ss_pred CcccEEEEEcCCc--chHHHHHHH---cCCEEEEEecCCCchhHHHHHhc------CCccEEEeccCcCC------CCCC
Q 047630 235 GTIRIGLDIGGGV--ATFAVRMME---RNITIVTTSMNLNGPFNNFIASR------GVVPLYISISQRLP------FFDN 297 (392)
Q Consensus 235 ~~ir~VLDIGCGt--G~~a~~La~---~g~~vvg~~iD~~a~~~~~aa~r------g~i~~~~~d~~~Lp------f~d~ 297 (392)
..++.+||||||+ +.+...+++ .+..|+++| .+..+.+.+.++ +.+.++++|+.+++ ...+
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD--~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVD--NDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEE--CCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEe--CChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccc
Confidence 3466779999997 434455444 467888855 434444422221 13678999988752 1135
Q ss_pred ccc-----EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc
Q 047630 298 TLD-----IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342 (392)
Q Consensus 298 sFD-----lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~ 342 (392)
+|| .|+++.+|||+.+.+....+++++.++|+|||+|+++++...
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 566 588889998865555467899999999999999999987653
No 190
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.97 E-value=1.1e-08 Score=95.06 Aligned_cols=129 Identities=13% Similarity=0.138 Sum_probs=88.3
Q ss_pred HHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCC--EEEEEecCCCchhHH----HHHhcCC---ccEEEeccC-cCCC
Q 047630 225 IDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNI--TIVTTSMNLNGPFNN----FIASRGV---VPLYISISQ-RLPF 294 (392)
Q Consensus 225 I~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~--~vvg~~iD~~a~~~~----~aa~rg~---i~~~~~d~~-~Lpf 294 (392)
+..+..+.+.+ .+|||||||+|.++..+++.+. .|+++|+| ....+ .+...|. +.+..+|.. .++.
T Consensus 6 L~~l~~~v~~g--~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~--~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~ 81 (225)
T 3kr9_A 6 LELVASFVSQG--AILLDVGSDHAYLPIELVERGQIKSAIAGEVV--EGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE 81 (225)
T ss_dssp HHHHHTTSCTT--EEEEEETCSTTHHHHHHHHTTSEEEEEEEESS--HHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred HHHHHHhCCCC--CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHHcCCCceEEEEECchhhhccc
Confidence 44455544333 2349999999999999999875 56675544 33333 3334443 678888863 4442
Q ss_pred CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEee
Q 047630 295 FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 295 ~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
...||+|+....- ...+..++.+..+.|+++|+|++.... -...+++.+.+.||..+.-..+.
T Consensus 82 -~~~~D~IviaG~G-----g~~i~~Il~~~~~~L~~~~~lVlq~~~-----~~~~vr~~L~~~Gf~i~~e~lv~ 144 (225)
T 3kr9_A 82 -TDQVSVITIAGMG-----GRLIARILEEGLGKLANVERLILQPNN-----REDDLRIWLQDHGFQIVAESILE 144 (225)
T ss_dssp -GGCCCEEEEEEEC-----HHHHHHHHHHTGGGCTTCCEEEEEESS-----CHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -CcCCCEEEEcCCC-----hHHHHHHHHHHHHHhCCCCEEEEECCC-----CHHHHHHHHHHCCCEEEEEEEEE
Confidence 2269998875432 133567899999999999999997652 23458889999999999877654
No 191
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.96 E-value=7.5e-10 Score=101.29 Aligned_cols=95 Identities=14% Similarity=0.051 Sum_probs=70.1
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHcCC-------EEEEEecCCCchhHHHHHh----cC-------CccEEEeccCcC
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMERNI-------TIVTTSMNLNGPFNNFIAS----RG-------VVPLYISISQRL 292 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~g~-------~vvg~~iD~~a~~~~~aa~----rg-------~i~~~~~d~~~L 292 (392)
+.++.+| ||||||+|.++..+++... .++++| ++....+.+.+ .+ .+.+..+|....
T Consensus 78 ~~~~~~V---LdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD--~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 152 (227)
T 2pbf_A 78 LKPGSRA---IDVGSGSGYLTVCMAIKMNVLENKNSYVIGLE--RVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQV 152 (227)
T ss_dssp SCTTCEE---EEESCTTSHHHHHHHHHTTTTTCTTCEEEEEE--SCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGC
T ss_pred CCCCCEE---EEECCCCCHHHHHHHHHhcccCCCCCEEEEEe--CCHHHHHHHHHHHHHcCccccccCCEEEEECChHhc
Confidence 4455555 9999999999999998643 888855 43444433222 22 367888888775
Q ss_pred C----CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 293 P----FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 293 p----f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
. ..+++||+|++...++++ +.++.++|||||++++...
T Consensus 153 ~~~~~~~~~~fD~I~~~~~~~~~---------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 153 NEEEKKELGLFDAIHVGASASEL---------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp CHHHHHHHCCEEEEEECSBBSSC---------CHHHHHHEEEEEEEEEEEE
T ss_pred ccccCccCCCcCEEEECCchHHH---------HHHHHHhcCCCcEEEEEEc
Confidence 5 556789999999888663 4788999999999988854
No 192
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.96 E-value=4.3e-09 Score=100.13 Aligned_cols=99 Identities=12% Similarity=0.168 Sum_probs=72.0
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHcCC--EEEEEecCCCchhHHH----HHhcC--CccEEEeccCcCCCCCCcccEE
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMERNI--TIVTTSMNLNGPFNNF----IASRG--VVPLYISISQRLPFFDNTLDIV 302 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~g~--~vvg~~iD~~a~~~~~----aa~rg--~i~~~~~d~~~Lpf~d~sFDlV 302 (392)
+.++.++ ||+|||+|.++..+++.+. .|+++|++ ....+. +..++ .+.++.+|+..++. +++||+|
T Consensus 117 ~~~~~~V---LDlgcG~G~~s~~la~~~~~~~V~~vD~s--~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~V 190 (272)
T 3a27_A 117 SNENEVV---VDMFAGIGYFTIPLAKYSKPKLVYAIEKN--PTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRV 190 (272)
T ss_dssp CCTTCEE---EETTCTTTTTHHHHHHHTCCSEEEEEECC--HHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEE
T ss_pred cCCCCEE---EEecCcCCHHHHHHHHhCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEE
Confidence 3444445 9999999999999999744 88885544 344332 23333 25788999888744 6789999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~ 342 (392)
++.... ....++.++.++|||||++++..+...
T Consensus 191 i~d~p~-------~~~~~l~~~~~~LkpgG~l~~s~~~~~ 223 (272)
T 3a27_A 191 IMGYVH-------KTHKFLDKTFEFLKDRGVIHYHETVAE 223 (272)
T ss_dssp EECCCS-------SGGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred EECCcc-------cHHHHHHHHHHHcCCCCEEEEEEcCcc
Confidence 987654 223588999999999999998887553
No 193
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.95 E-value=1.4e-09 Score=101.39 Aligned_cols=115 Identities=17% Similarity=0.200 Sum_probs=74.8
Q ss_pred EEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhHHHHH----hc--------C--CccEEEeccCc-CC--CCCCcc
Q 047630 239 IGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFNNFIA----SR--------G--VVPLYISISQR-LP--FFDNTL 299 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~~~aa----~r--------g--~i~~~~~d~~~-Lp--f~d~sF 299 (392)
.|||||||+|.++..+++.+ ..++|+| ++....+.+. .. + .+.++.+|+.. ++ +.++++
T Consensus 52 ~vLDiGcG~G~~~~~la~~~~~~~v~gvD--~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~ 129 (246)
T 2vdv_E 52 TIADIGCGFGGLMIDLSPAFPEDLILGME--IRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQL 129 (246)
T ss_dssp EEEEETCTTSHHHHHHHHHSTTSEEEEEE--SCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCE
T ss_pred EEEEEcCCCCHHHHHHHHhCCCCCEEEEE--cCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccccc
Confidence 34999999999999999975 4688854 5344443221 11 3 36788899876 66 778899
Q ss_pred cEEEEcccccccCCch------hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCC
Q 047630 300 DIVHSMHVLSNWIPTT------LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGF 359 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~------~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf 359 (392)
|.|+..+.- .|.... ....++.++.++|||||+|++... .+...+...+.+.+.|.
T Consensus 130 d~v~~~~p~-p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td---~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 130 SKMFFCFPD-PHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD---VKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEEESCC-CC------CSSCCCHHHHHHHHHHEEEEEEEEEEES---CHHHHHHHHHHHHHSTT
T ss_pred CEEEEECCC-cccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec---cHHHHHHHHHHHHhCcC
Confidence 999865422 110000 013699999999999999988532 23333445556666663
No 194
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.95 E-value=1.9e-09 Score=97.80 Aligned_cols=135 Identities=13% Similarity=0.146 Sum_probs=86.2
Q ss_pred HHHHHHHHHhh-CCCCcccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHH----HHhcCCc-cEEEeccCcC
Q 047630 221 LDFSIDEVLAT-KKPGTIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNF----IASRGVV-PLYISISQRL 292 (392)
Q Consensus 221 ~~~lI~~ll~l-~~~~~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~----aa~rg~i-~~~~~d~~~L 292 (392)
.+.+.+.+... .+.++| ||+|||+|.++..++.. ++++++ +|++..+.+. ++..|.- .+.+.+....
T Consensus 36 ld~fY~~~~~~l~~~~~V---LDlGCG~GplAl~l~~~~p~a~~~A--~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~ 110 (200)
T 3fzg_A 36 LNDFYTYVFGNIKHVSSI---LDFGCGFNPLALYQWNENEKIIYHA--YDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD 110 (200)
T ss_dssp HHHHHHHHHHHSCCCSEE---EEETCTTHHHHHHHHCSSCCCEEEE--ECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH
T ss_pred HHHHHHHHHhhcCCCCeE---EEecCCCCHHHHHHHhcCCCCEEEE--EeCCHHHHHHHHHHHHhcCCCccEEEeccccc
Confidence 44444555543 334555 99999999999999875 667777 5554555553 3333532 3555555443
Q ss_pred CCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc-------ccchHHHHHHHHHHcCCeEEEEE
Q 047630 293 PFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV-------GAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 293 pf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~-------~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
.+.++||+|++..++|++ ++.+..+.++.+.|||||+|+-.....- .+.....|++.+.+ .+.++.-.
T Consensus 111 -~~~~~~DvVLa~k~LHlL---~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~-~~~~~~~~ 185 (200)
T 3fzg_A 111 -VYKGTYDVVFLLKMLPVL---KQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKG-WIKILDSK 185 (200)
T ss_dssp -HTTSEEEEEEEETCHHHH---HHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTT-TSCEEEEE
T ss_pred -CCCCCcChhhHhhHHHhh---hhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccC-cceeeeee
Confidence 457889999999999997 2233577799999999999987763211 12224445555533 45555433
No 195
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.95 E-value=9.1e-10 Score=103.02 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=78.2
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchh--HHHHHhcC---CccEEEeccCcC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPF--NNFIASRG---VVPLYISISQRL 292 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~--~~~aa~rg---~i~~~~~d~~~L 292 (392)
...++..++...++.+| ||||||+|..+..+++. +..++++|++..... .+.+.+.+ .+.++++|+..+
T Consensus 48 ~~~~l~~l~~~~~~~~V---LDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~ 124 (242)
T 3r3h_A 48 QAQFMQMLIRLTRAKKV---LELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDT 124 (242)
T ss_dssp HHHHHHHHHHHHTCSEE---EEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHH
T ss_pred HHHHHHHHHhhcCcCEE---EEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 34455555555554555 99999999999999983 678999776652211 12333333 478889887654
Q ss_pred -CCC-----CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc
Q 047630 293 -PFF-----DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 293 -pf~-----d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~ 341 (392)
+.. +++||+|++.... .....+++++.++|||||++++++...
T Consensus 125 l~~~~~~~~~~~fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 125 LHSLLNEGGEHQFDFIFIDADK------TNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHCSSCEEEEEEESCG------GGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred HHHHhhccCCCCEeEEEEcCCh------HHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 222 5789999986542 344568999999999999999988653
No 196
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.95 E-value=8e-10 Score=107.29 Aligned_cols=99 Identities=11% Similarity=-0.036 Sum_probs=66.0
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEec----CCCchhHH-HHHhc--CCccEEEe-ccCcCCCCCCcccEEEEccccc-
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSM----NLNGPFNN-FIASR--GVVPLYIS-ISQRLPFFDNTLDIVHSMHVLS- 309 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~i----D~~a~~~~-~aa~r--g~i~~~~~-d~~~Lpf~d~sFDlV~s~~~l~- 309 (392)
+|||+|||+|.++..++++ ..|+++|+ +. ..... .+... ..+.++.+ |+..++ +++||+|+|..+++
T Consensus 85 ~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~~~~ 160 (305)
T 2p41_A 85 KVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGP-GHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIGESS 160 (305)
T ss_dssp EEEEETCTTSHHHHHHHTS-TTEEEEEEECCCST-TSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCCCCC
T ss_pred EEEEEcCCCCHHHHHHHhc-CCEEEEeccccCch-hHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEECCcccc
Confidence 3499999999999999998 47888776 21 11100 01111 23677777 777665 56899999987653
Q ss_pred --ccCCchhHHHHHHHHHHcccCCcEEEEEeecc
Q 047630 310 --NWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 310 --~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~ 341 (392)
+..+......+|.++.++|||||.|++..+..
T Consensus 161 g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 161 PNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 11111111257899999999999999866544
No 197
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.94 E-value=5.7e-09 Score=96.27 Aligned_cols=118 Identities=13% Similarity=0.062 Sum_probs=79.3
Q ss_pred hhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cC---CccEEEeccCcCCCCCCcccEE
Q 047630 230 ATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQRLPFFDNTLDIV 302 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~Lpf~d~sFDlV 302 (392)
.+.++.+| ||+|||+|.++..+++.+..+++ +|++....+.+.+ .+ .+.+..+|.....+.+++||+|
T Consensus 88 ~~~~~~~v---ldiG~G~G~~~~~l~~~~~~v~~--vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 162 (248)
T 2yvl_A 88 NLNKEKRV---LEFGTGSGALLAVLSEVAGEVWT--FEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAA 162 (248)
T ss_dssp TCCTTCEE---EEECCTTSHHHHHHHHHSSEEEE--ECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEE
T ss_pred CCCCCCEE---EEeCCCccHHHHHHHHhCCEEEE--EecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEE
Confidence 34455555 99999999999999988888888 5554444443332 23 3677778877754366789999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEE
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
++... +. ..+++++.++|||||.+++..... +.. ..+.+.+++. |..++.
T Consensus 163 ~~~~~-----~~---~~~l~~~~~~L~~gG~l~~~~~~~--~~~-~~~~~~l~~~-f~~~~~ 212 (248)
T 2yvl_A 163 FVDVR-----EP---WHYLEKVHKSLMEGAPVGFLLPTA--NQV-IKLLESIENY-FGNLEV 212 (248)
T ss_dssp EECSS-----CG---GGGHHHHHHHBCTTCEEEEEESSH--HHH-HHHHHHSTTT-EEEEEE
T ss_pred EECCc-----CH---HHHHHHHHHHcCCCCEEEEEeCCH--HHH-HHHHHHHHhh-CCcceE
Confidence 98421 22 247899999999999999886432 122 2355555555 765543
No 198
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.94 E-value=8.6e-09 Score=99.41 Aligned_cols=117 Identities=12% Similarity=-0.004 Sum_probs=80.4
Q ss_pred hCCCCcccEEEEEcC------CcchHHHHHHH---cCCEEEEEecCCCchhHHHHHhcCCccE-EEeccCcCCCCCCccc
Q 047630 231 TKKPGTIRIGLDIGG------GVATFAVRMME---RNITIVTTSMNLNGPFNNFIASRGVVPL-YISISQRLPFFDNTLD 300 (392)
Q Consensus 231 l~~~~~ir~VLDIGC------GtG~~a~~La~---~g~~vvg~~iD~~a~~~~~aa~rg~i~~-~~~d~~~Lpf~d~sFD 300 (392)
+.++.+| ||+|| |+|. ..+++ .+..|+|+|++.. . . .+.+ +++|+..+++. ++||
T Consensus 61 l~~g~~V---LDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------v-~-~v~~~i~gD~~~~~~~-~~fD 125 (290)
T 2xyq_A 61 VPYNMRV---IHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------V-S-DADSTLIGDCATVHTA-NKWD 125 (290)
T ss_dssp CCTTCEE---EEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------B-C-SSSEEEESCGGGCCCS-SCEE
T ss_pred CCCCCEE---EEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------C-C-CCEEEEECccccCCcc-Cccc
Confidence 3444455 99999 4476 33333 2468888766652 1 2 3789 99999988764 6899
Q ss_pred EEEEcccccc--------cCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEE
Q 047630 301 IVHSMHVLSN--------WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 301 lV~s~~~l~~--------~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
+|++....+. .......+.+++++.|+|||||.|++..+..... +++.+++++.||..++..
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~---~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN---ADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC---HHHHHHHTTEEEEEEEEE
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCH---HHHHHHHHHcCCcEEEEE
Confidence 9999744221 1112334679999999999999999987654322 247778999999887665
No 199
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.93 E-value=1e-09 Score=107.72 Aligned_cols=100 Identities=18% Similarity=0.261 Sum_probs=72.0
Q ss_pred CCCcccEEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhHHHHH----hcCC-ccEEEeccCcCCCCCCcccEEEEc
Q 047630 233 KPGTIRIGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFNNFIA----SRGV-VPLYISISQRLPFFDNTLDIVHSM 305 (392)
Q Consensus 233 ~~~~ir~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~~~aa----~rg~-i~~~~~d~~~Lpf~d~sFDlV~s~ 305 (392)
++++| ||+|||+|.++..+++.+ ..++++| ++..+.+.+. ..+. +.++.+|.... .+++||+|+++
T Consensus 196 ~~~~V---LDlGcG~G~~~~~la~~~~~~~v~~vD--~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~--~~~~fD~Iv~~ 268 (343)
T 2pjd_A 196 TKGKV---LDVGCGAGVLSVAFARHSPKIRLTLCD--VSAPAVEASRATLAANGVEGEVFASNVFSE--VKGRFDMIISN 268 (343)
T ss_dssp CCSBC---CBTTCTTSHHHHHHHHHCTTCBCEEEE--SBHHHHHHHHHHHHHTTCCCEEEECSTTTT--CCSCEEEEEEC
T ss_pred CCCeE---EEecCccCHHHHHHHHHCCCCEEEEEE--CCHHHHHHHHHHHHHhCCCCEEEEcccccc--ccCCeeEEEEC
Confidence 34555 999999999999999876 4788855 4334333222 2332 45677776654 37899999999
Q ss_pred ccccccC--CchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 306 HVLSNWI--PTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 306 ~~l~~~~--~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
..+|+.. .....+.+++++.|+|||||.+++...
T Consensus 269 ~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 269 PPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp CCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 9887521 234567899999999999999988754
No 200
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.93 E-value=2.6e-09 Score=108.39 Aligned_cols=103 Identities=16% Similarity=0.066 Sum_probs=69.6
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc-C-CEEEEEecCCCchhHHHH-----------HhcC----CccEEEeccCcC-
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER-N-ITIVTTSMNLNGPFNNFI-----------ASRG----VVPLYISISQRL- 292 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~-g-~~vvg~~iD~~a~~~~~a-----------a~rg----~i~~~~~d~~~L- 292 (392)
+.++.+| ||||||+|.++..+++. + ..|+|+|++ ......+ ...| .+.+++++....
T Consensus 240 l~~g~~V---LDLGCGsG~la~~LA~~~g~~~V~GVDis--~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~ 314 (433)
T 1u2z_A 240 LKKGDTF---MDLGSGVGNCVVQAALECGCALSFGCEIM--DDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDN 314 (433)
T ss_dssp CCTTCEE---EEESCTTSHHHHHHHHHHCCSEEEEEECC--HHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTC
T ss_pred CCCCCEE---EEeCCCcCHHHHHHHHHCCCCEEEEEeCC--HHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccc
Confidence 3444455 99999999999999984 4 468885544 3332222 2223 356777654321
Q ss_pred -CC--CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc
Q 047630 293 -PF--FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342 (392)
Q Consensus 293 -pf--~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~ 342 (392)
++ ..++||+|+++.++. . .++..+|.++.|+|||||.+++.+.+..
T Consensus 315 ~~~~~~~~~FDvIvvn~~l~-~---~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 315 NRVAELIPQCDVILVNNFLF-D---EDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp HHHHHHGGGCSEEEECCTTC-C---HHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred cccccccCCCCEEEEeCccc-c---ccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 22 247899999876662 2 4566789999999999999999865443
No 201
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.93 E-value=1.2e-09 Score=112.37 Aligned_cols=95 Identities=14% Similarity=0.163 Sum_probs=70.2
Q ss_pred EEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHHH----HHhcC---CccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNF----IASRG---VVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~~----aa~rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
+|||||||+|.++..+++.+ ..|+++|++ ++.+. +.+.+ .+.++.+|..+++++ ++||+|++...+++
T Consensus 161 ~VLDiGcGtG~la~~la~~~~~~V~gvD~s---~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~ 236 (480)
T 3b3j_A 161 IVLDVGCGSGILSFFAAQAGARKIYAVEAS---TMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYM 236 (480)
T ss_dssp EEEEESCSTTHHHHHHHHTTCSEEEEEECH---HHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHH
T ss_pred EEEEecCcccHHHHHHHHcCCCEEEEEEcH---HHHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHh
Confidence 45999999999999999875 488885543 23332 22233 378899999888765 58999999877777
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+..+ .....+.++.++|||||++++..
T Consensus 237 ~~~e-~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 237 LFNE-RMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp HTCH-HHHHHHHHGGGGEEEEEEEESCE
T ss_pred cCcH-HHHHHHHHHHHhcCCCCEEEEEe
Confidence 5443 44567779999999999997543
No 202
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.93 E-value=3.2e-09 Score=108.45 Aligned_cols=138 Identities=13% Similarity=0.086 Sum_probs=92.6
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHH----HHHhcCC--ccEEEeccCc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNN----FIASRGV--VPLYISISQR 291 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~----~aa~rg~--i~~~~~d~~~ 291 (392)
...++..++...++.+| ||+|||+|..+..+++. ...|++ +|++....+ .+.+.|. +.++.+|...
T Consensus 93 ss~l~~~~L~~~~g~~V---LDlcaGpGgkt~~lA~~~~~~g~V~A--vDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~ 167 (456)
T 3m4x_A 93 SAMIVGTAAAAKPGEKV---LDLCAAPGGKSTQLAAQMKGKGLLVT--NEIFPKRAKILSENIERWGVSNAIVTNHAPAE 167 (456)
T ss_dssp TTHHHHHHHCCCTTCEE---EESSCTTCHHHHHHHHHHTTCSEEEE--ECSSHHHHHHHHHHHHHHTCSSEEEECCCHHH
T ss_pred HHHHHHHHcCCCCCCEE---EEECCCcCHHHHHHHHHcCCCCEEEE--EeCCHHHHHHHHHHHHHcCCCceEEEeCCHHH
Confidence 34455666666666666 99999999999999874 357888 555444443 2333343 5667778776
Q ss_pred CC-CCCCcccEEEEccccc---ccCCch----------------hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHH
Q 047630 292 LP-FFDNTLDIVHSMHVLS---NWIPTT----------------LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYV 351 (392)
Q Consensus 292 Lp-f~d~sFDlV~s~~~l~---~~~~~~----------------~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~ 351 (392)
++ ..+++||+|++.-... .+.... ....+|.++.++|||||+|+++......++..+.+.
T Consensus 168 l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~ 247 (456)
T 3m4x_A 168 LVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIIS 247 (456)
T ss_dssp HHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHH
T ss_pred hhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHH
Confidence 64 3467899999753211 111001 123689999999999999998876555555567788
Q ss_pred HHHHHcCCeEEE
Q 047630 352 PLIESVGFNKLK 363 (392)
Q Consensus 352 ~ll~~aGf~~i~ 363 (392)
.++++.+|+.+.
T Consensus 248 ~~l~~~~~~l~~ 259 (456)
T 3m4x_A 248 WLVENYPVTIEE 259 (456)
T ss_dssp HHHHHSSEEEEC
T ss_pred HHHHhCCCEEEe
Confidence 889998876654
No 203
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.93 E-value=9.4e-09 Score=100.28 Aligned_cols=122 Identities=15% Similarity=0.133 Sum_probs=79.5
Q ss_pred EEEEEcCCcchHHHHHHH--cCCEEEEEecCCCchhHHHHHhc------CCccEEEeccCcC--CCCCCcccEEEEcccc
Q 047630 239 IGLDIGGGVATFAVRMME--RNITIVTTSMNLNGPFNNFIASR------GVVPLYISISQRL--PFFDNTLDIVHSMHVL 308 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~--~g~~vvg~~iD~~a~~~~~aa~r------g~i~~~~~d~~~L--pf~d~sFDlV~s~~~l 308 (392)
.|||||||+|.++..+++ .+..+++++ ++....+.+.++ ..+.++++|...+ .+.+++||+|++....
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VE--idp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVE--LDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEE--SCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEE--CCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 569999999999999998 367787755 534554444432 1367888887654 3457899999986433
Q ss_pred cccCCchhH--HHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEE
Q 047630 309 SNWIPTTLL--HFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 309 ~~~~~~~~l--~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
+. .....+ ..++++++|+|||||+|++...-.........+.+.+++. |..+..
T Consensus 170 ~~-~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~v-F~~v~~ 225 (317)
T 3gjy_A 170 GA-ITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEV-FEHVAV 225 (317)
T ss_dssp TS-CCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHH-CSEEEE
T ss_pred cc-ccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHH-CCceEE
Confidence 22 222221 5799999999999999988765332222222344455554 655543
No 204
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.92 E-value=9.9e-09 Score=101.94 Aligned_cols=119 Identities=10% Similarity=0.046 Sum_probs=82.5
Q ss_pred EEEEEcCCcchHHHHHHHcCC--EEEEEecCCCchhHHHHH----hcC--CccEEEeccCc-CCC-CCCcccEEEEcccc
Q 047630 239 IGLDIGGGVATFAVRMMERNI--TIVTTSMNLNGPFNNFIA----SRG--VVPLYISISQR-LPF-FDNTLDIVHSMHVL 308 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~--~vvg~~iD~~a~~~~~aa----~rg--~i~~~~~d~~~-Lpf-~d~sFDlV~s~~~l 308 (392)
.|||+| |+|.++..++..+. .|++ +|++..+.+.+. +.| .+.++.+|+.. +|. .+++||+|++...+
T Consensus 175 ~VLDlG-G~G~~~~~la~~~~~~~v~~--vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 175 DIFVLG-DDDLTSIALMLSGLPKRIAV--LDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPE 251 (373)
T ss_dssp EEEEES-CTTCHHHHHHHHTCCSEEEE--ECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCS
T ss_pred EEEEEC-CCCHHHHHHHHhCCCCEEEE--EECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCC
Confidence 459999 99999999998765 7877 555444444332 234 37889999888 764 46789999998766
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEE-EEEeecccccch--HHHHHHHHH-HcCCeEEEEE
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLF-WLDHFFCVGAQL--EDVYVPLIE-SVGFNKLKWV 365 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~l-ii~~~~~~~~~l--~~~l~~ll~-~aGf~~i~w~ 365 (392)
+.. ....++.++.++|||||.+ ++.. ....... ...+.+++. +.||......
T Consensus 252 ~~~----~~~~~l~~~~~~LkpgG~~~~~~~-~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 307 (373)
T 2qm3_A 252 TLE----AIRAFVGRGIATLKGPRCAGYFGI-TRRESSLDKWREIQKLLLNEFNVVITDII 307 (373)
T ss_dssp SHH----HHHHHHHHHHHTBCSTTCEEEEEE-CTTTCCHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred chH----HHHHHHHHHHHHcccCCeEEEEEE-ecCcCCHHHHHHHHHHHHHhcCcchhhhh
Confidence 543 2478999999999999954 4443 3211221 144667777 8898775543
No 205
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.92 E-value=1.6e-09 Score=99.05 Aligned_cols=95 Identities=15% Similarity=0.113 Sum_probs=69.5
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc-C--CEEEEEecCCCchhHHHHH----h-------cCCccEEEeccCcCCCCC
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER-N--ITIVTTSMNLNGPFNNFIA----S-------RGVVPLYISISQRLPFFD 296 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~-g--~~vvg~~iD~~a~~~~~aa----~-------rg~i~~~~~d~~~Lpf~d 296 (392)
+.++.+| ||+|||+|.++..+++. + ..++++| ++....+.+. + ...+.+..+|....+..+
T Consensus 75 ~~~~~~v---LDiG~G~G~~~~~la~~~~~~~~v~~vD--~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 149 (226)
T 1i1n_A 75 LHEGAKA---LDVGSGSGILTACFARMVGCTGKVIGID--HIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEE 149 (226)
T ss_dssp SCTTCEE---EEETCTTSHHHHHHHHHHCTTCEEEEEE--SCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGG
T ss_pred CCCCCEE---EEEcCCcCHHHHHHHHHhCCCcEEEEEe--CCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccC
Confidence 3344445 99999999999999985 3 5788855 4344443222 2 124678888887766667
Q ss_pred CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
++||+|++...++++ +.++.++|||||++++...
T Consensus 150 ~~fD~i~~~~~~~~~---------~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 150 APYDAIHVGAAAPVV---------PQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp CCEEEEEECSBBSSC---------CHHHHHTEEEEEEEEEEES
T ss_pred CCcCEEEECCchHHH---------HHHHHHhcCCCcEEEEEEe
Confidence 889999999887653 4788999999999998754
No 206
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.92 E-value=3.3e-09 Score=108.61 Aligned_cols=137 Identities=14% Similarity=0.152 Sum_probs=91.0
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHH----HhcCC-ccEEEeccCcCC
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFI----ASRGV-VPLYISISQRLP 293 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~a----a~rg~-i~~~~~d~~~Lp 293 (392)
..++..++...++.+| ||+|||+|..+..+++. ...|++ +|++....+.+ .+.|. +.++.+|...++
T Consensus 90 s~l~a~~L~~~~g~~V---LDlgaGpG~kt~~LA~~~~~~g~V~A--vDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~ 164 (464)
T 3m6w_A 90 AQAVGVLLDPKPGERV---LDLAAAPGGKTTHLAARMGGKGLLLA--NEVDGKRVRGLLENVERWGAPLAVTQAPPRALA 164 (464)
T ss_dssp THHHHHHHCCCTTCEE---EESSCTTCHHHHHHHHHTTTCSEEEE--ECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHH
T ss_pred HHHHHHhcCcCCCCEE---EEEcCCcCHHHHHHHHhCCCCCEEEE--EECCHHHHHHHHHHHHHcCCeEEEEECCHHHhh
Confidence 4455566666666666 99999999999999974 247877 55544444432 23343 667778877765
Q ss_pred -CCCCcccEEEEccc------ccccC------Cchh-------HHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHH
Q 047630 294 -FFDNTLDIVHSMHV------LSNWI------PTTL-------LHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPL 353 (392)
Q Consensus 294 -f~d~sFDlV~s~~~------l~~~~------~~~~-------l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~l 353 (392)
+.+++||+|++.-. +..-. .+++ ...+|.++.++|||||+|+++......++.++.+..+
T Consensus 165 ~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~ 244 (464)
T 3m6w_A 165 EAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHF 244 (464)
T ss_dssp HHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHH
T ss_pred hhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHH
Confidence 35688999996311 11100 1111 2678999999999999999887554445555667777
Q ss_pred HHHc-CCeEEE
Q 047630 354 IESV-GFNKLK 363 (392)
Q Consensus 354 l~~a-Gf~~i~ 363 (392)
+++. +|+.+.
T Consensus 245 l~~~~~~~l~~ 255 (464)
T 3m6w_A 245 LKAHPEFRLED 255 (464)
T ss_dssp HHHCTTEEEEC
T ss_pred HHHCCCcEEEe
Confidence 8776 576654
No 207
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.92 E-value=1e-08 Score=101.99 Aligned_cols=124 Identities=15% Similarity=0.062 Sum_probs=85.1
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHcCC--EEEEEecCCCchhHHH----HHhcC---CccEEEeccCcCCCCCCcccE
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMERNI--TIVTTSMNLNGPFNNF----IASRG---VVPLYISISQRLPFFDNTLDI 301 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~g~--~vvg~~iD~~a~~~~~----aa~rg---~i~~~~~d~~~Lpf~d~sFDl 301 (392)
..++..+ ||+|||+|.++..++..+. .++|+|+| ..+.+. +...| .+.+.++|+..+++++++||+
T Consensus 215 ~~~~~~v---LD~gCGsG~~~i~~a~~~~~~~v~g~Dis--~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~ 289 (373)
T 3tm4_A 215 ELDGGSV---LDPMCGSGTILIELALRRYSGEIIGIEKY--RKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDF 289 (373)
T ss_dssp TCCSCCE---EETTCTTCHHHHHHHHTTCCSCEEEEESC--HHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEE
T ss_pred cCCCCEE---EEccCcCcHHHHHHHHhCCCCeEEEEeCC--HHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCE
Confidence 4555556 9999999999999999877 88886654 344432 23334 378999999999988899999
Q ss_pred EEEcccccccCC-c---hh-HHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEe
Q 047630 302 VHSMHVLSNWIP-T---TL-LHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 302 V~s~~~l~~~~~-~---~~-l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
|+++..+..... . .. ...+++++.|+| ||.+++... ..+.+.+.+++.||+..+-...
T Consensus 290 Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~------~~~~~~~~~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 290 AISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT------EKKAIEEAIAENGFEIIHHRVI 352 (373)
T ss_dssp EEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES------CHHHHHHHHHHTTEEEEEEEEE
T ss_pred EEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC------CHHHHHHHHHHcCCEEEEEEEE
Confidence 999866543211 1 11 256889999999 444433321 1234667889999998776544
No 208
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.91 E-value=1.8e-09 Score=101.36 Aligned_cols=109 Identities=9% Similarity=0.013 Sum_probs=76.5
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHH----HhcC---CccEEEeccC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFI----ASRG---VVPLYISISQ 290 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~a----a~rg---~i~~~~~d~~ 290 (392)
...++..++...+..+| ||||||+|..+..+++. +..++++|++. ...+.+ .+.+ .+.++.+|+.
T Consensus 67 ~~~ll~~l~~~~~~~~V---LeiG~G~G~~~~~la~~~~~~~~v~~iD~s~--~~~~~a~~~~~~~g~~~~i~~~~gda~ 141 (247)
T 1sui_A 67 EGQFLSMLLKLINAKNT---MEIGVYTGYSLLATALAIPEDGKILAMDINK--ENYELGLPVIKKAGVDHKIDFREGPAL 141 (247)
T ss_dssp HHHHHHHHHHHTTCCEE---EEECCGGGHHHHHHHHHSCTTCEEEEEESCC--HHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHhhCcCEE---EEeCCCcCHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHcCCCCCeEEEECCHH
Confidence 34455666665555555 99999999999999985 67888855543 444322 2233 2678888865
Q ss_pred cC-CC------CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec
Q 047630 291 RL-PF------FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 291 ~L-pf------~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~ 340 (392)
.. +. .+++||+|++.... .....+++++.++|||||++++++..
T Consensus 142 ~~l~~l~~~~~~~~~fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 142 PVLDEMIKDEKNHGSYDFIFVDADK------DNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp HHHHHHHHSGGGTTCBSEEEECSCS------TTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred HHHHHHHhccCCCCCEEEEEEcCch------HHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 43 32 16789999986432 33457999999999999999998743
No 209
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.91 E-value=3.4e-09 Score=105.79 Aligned_cols=97 Identities=13% Similarity=0.178 Sum_probs=71.3
Q ss_pred EEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHH-HHHhcC---CccEEEeccCcCCCCCCcccEEEEcccccccCCc
Q 047630 240 GLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNN-FIASRG---VVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPT 314 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~-~aa~rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~ 314 (392)
|||||||+|.++...++.|+ .|++++.+..+.... .+..+| .|.++.++++.+.++ +.||+|++-..-.....+
T Consensus 87 VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l~~e 165 (376)
T 4hc4_A 87 VLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYGLLHE 165 (376)
T ss_dssp EEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTTBTTT
T ss_pred EEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccccccc
Confidence 59999999999999898885 688966543111111 233444 378999999998876 579999995444443444
Q ss_pred hhHHHHHHHHHHcccCCcEEEEE
Q 047630 315 TLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 315 ~~l~~~L~el~RvLKPGG~lii~ 337 (392)
..+..++....|.|||||.++..
T Consensus 166 ~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 166 SMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp CSHHHHHHHHHHHEEEEEEEESC
T ss_pred chhhhHHHHHHhhCCCCceECCc
Confidence 56778999999999999998543
No 210
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.91 E-value=1.8e-09 Score=99.95 Aligned_cols=108 Identities=16% Similarity=0.202 Sum_probs=75.0
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHHh----cCC---ccEEEeccCc
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIAS----RGV---VPLYISISQR 291 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~----rg~---i~~~~~d~~~ 291 (392)
..++..++...++.+| ||||||+|..+..+++. +..++++|++ ....+.+.+ .+. +.+..+|...
T Consensus 49 ~~~l~~l~~~~~~~~V---LdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 49 GQFLNILTKISGAKRI---IEIGTFTGYSSLCFASALPEDGKILCCDVS--EEWTNVARKYWKENGLENKIFLKLGSALE 123 (239)
T ss_dssp HHHHHHHHHHHTCSEE---EEECCTTCHHHHHHHHHSCTTCEEEEEESC--HHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred HHHHHHHHHhhCcCEE---EEEeCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 3445555555555555 99999999999999986 5788885543 344433322 232 6777887543
Q ss_pred -CC--------------CCC--CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec
Q 047630 292 -LP--------------FFD--NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 292 -Lp--------------f~d--~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~ 340 (392)
++ |++ ++||+|++.... .....+++++.++|||||++++.+..
T Consensus 124 ~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~------~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 124 TLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK------ENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp HHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG------GGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHHHHHhhcccccccccccCCCCCcCEEEEeCCH------HHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 22 233 789999987543 33457899999999999999998743
No 211
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.91 E-value=1.7e-09 Score=99.88 Aligned_cols=97 Identities=16% Similarity=0.113 Sum_probs=69.4
Q ss_pred HHhhCCCCcccEEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHHHHHh----cC--CccEEEeccCcCCCCCC-cc
Q 047630 228 VLATKKPGTIRIGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRLPFFDN-TL 299 (392)
Q Consensus 228 ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~Lpf~d~-sF 299 (392)
.+.+.++.+| ||||||+|.++..+++.+ ..++++| ++....+.+.+ .+ .+.+..+|. ..+++++ .|
T Consensus 86 ~l~~~~~~~v---LdiG~G~G~~~~~la~~~~~~v~~vD--~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~f 159 (235)
T 1jg1_A 86 IANLKPGMNI---LEVGTGSGWNAALISEIVKTDVYTIE--RIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPY 159 (235)
T ss_dssp HHTCCTTCCE---EEECCTTSHHHHHHHHHHCSCEEEEE--SCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCE
T ss_pred hcCCCCCCEE---EEEeCCcCHHHHHHHHHhCCEEEEEe--CCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCc
Confidence 3445555566 999999999999999865 7888855 43344443332 23 267778886 4455544 49
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
|+|++..+++++ ..++.++|||||++++...
T Consensus 160 D~Ii~~~~~~~~---------~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 160 DVIIVTAGAPKI---------PEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp EEEEECSBBSSC---------CHHHHHTEEEEEEEEEEEC
T ss_pred cEEEECCcHHHH---------HHHHHHhcCCCcEEEEEEe
Confidence 999999988775 2478899999999998864
No 212
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.89 E-value=4.8e-09 Score=97.07 Aligned_cols=108 Identities=15% Similarity=0.105 Sum_probs=74.1
Q ss_pred HHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHHh----cC---CccEEEeccCc-
Q 047630 223 FSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIAS----RG---VVPLYISISQR- 291 (392)
Q Consensus 223 ~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~----rg---~i~~~~~d~~~- 291 (392)
.++..++...++.+| ||||||+|..+..+++. +..++++| ++....+.+.+ .+ .+.++.+++..
T Consensus 62 ~~l~~l~~~~~~~~v---LdiG~G~G~~~~~la~~~~~~~~v~~iD--~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 136 (232)
T 3cbg_A 62 QFLGLLISLTGAKQV---LEIGVFRGYSALAMALQLPPDGQIIACD--QDPNATAIAKKYWQKAGVAEKISLRLGPALAT 136 (232)
T ss_dssp HHHHHHHHHHTCCEE---EEECCTTSHHHHHHHTTSCTTCEEEEEE--SCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHhcCCCEE---EEecCCCCHHHHHHHHhCCCCCEEEEEE--CCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 344455544444555 99999999999999985 56888855 43344433322 23 26788887533
Q ss_pred ---CCCCC--CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc
Q 047630 292 ---LPFFD--NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 292 ---Lpf~d--~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~ 341 (392)
++..+ ++||+|++.... .....+++++.++|||||++++++...
T Consensus 137 l~~l~~~~~~~~fD~V~~d~~~------~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 137 LEQLTQGKPLPEFDLIFIDADK------RNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp HHHHHTSSSCCCEEEEEECSCG------GGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred HHHHHhcCCCCCcCEEEECCCH------HHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 33334 789999976542 344678999999999999999987543
No 213
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.89 E-value=2.4e-08 Score=89.48 Aligned_cols=107 Identities=7% Similarity=0.032 Sum_probs=71.9
Q ss_pred EEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhcC-CccEEEeccCcCCCCCCcccEEEEcccccccCCchh
Q 047630 239 IGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASRG-VVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTL 316 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~rg-~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~ 316 (392)
.|||+|||+|.++..+++.+. .++++| ++....+.+.++- .+.++++|+..++ ++||+|+++..++++....
T Consensus 54 ~vlD~gcG~G~~~~~l~~~~~~~v~~vD--~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~- 127 (200)
T 1ne2_A 54 SVIDAGTGNGILACGSYLLGAESVTAFD--IDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHS- 127 (200)
T ss_dssp EEEEETCTTCHHHHHHHHTTBSEEEEEE--SCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC--------
T ss_pred EEEEEeCCccHHHHHHHHcCCCEEEEEE--CCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccCch-
Confidence 349999999999999999865 588855 5344444444432 4789999988875 6899999999988764322
Q ss_pred HHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcC
Q 047630 317 LHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVG 358 (392)
Q Consensus 317 l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aG 358 (392)
...+++++.+++ |+.+++.. . ...+.+.+.+++.|
T Consensus 128 ~~~~l~~~~~~~--g~~~~~~~-~----~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 128 DRAFIDKAFETS--MWIYSIGN-A----KARDFLRREFSARG 162 (200)
T ss_dssp CHHHHHHHHHHE--EEEEEEEE-G----GGHHHHHHHHHHHE
T ss_pred hHHHHHHHHHhc--CcEEEEEc-C----chHHHHHHHHHHCC
Confidence 246899999998 55333332 1 12344677888888
No 214
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.88 E-value=8e-10 Score=115.89 Aligned_cols=120 Identities=14% Similarity=0.139 Sum_probs=84.2
Q ss_pred EEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHH----HHHhcCC--ccEEEeccCcC--CCCCCcccEEEEccccccc
Q 047630 240 GLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNN----FIASRGV--VPLYISISQRL--PFFDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~----~aa~rg~--i~~~~~d~~~L--pf~d~sFDlV~s~~~l~~~ 311 (392)
|||||||.|.++..|++.|..|+|+| ++....+ .+.+++. +.+.+++++++ ++.+++||+|+|+.+++|+
T Consensus 70 vLDvGCG~G~~~~~la~~ga~V~giD--~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv 147 (569)
T 4azs_A 70 VLDLGCAQGFFSLSLASKGATIVGID--FQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHI 147 (569)
T ss_dssp EEEETCTTSHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHHH
T ss_pred EEEECCCCcHHHHHHHhCCCEEEEEC--CCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchhcC
Confidence 49999999999999999999999955 5333333 2334452 68889998887 5678899999999999997
Q ss_pred CCchhHHHHHHHHHHcccCCcEEEEEeecccccch------HHHHHHHHHHcCCeEE
Q 047630 312 IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQL------EDVYVPLIESVGFNKL 362 (392)
Q Consensus 312 ~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l------~~~l~~ll~~aGf~~i 362 (392)
.++... ..+..+.+.|+++|..++..+...+..+ ..+|.++++..+|..+
T Consensus 148 ~~~~~~-~~~~~~~~tl~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~i~~~~~~~~ 203 (569)
T 4azs_A 148 VHLHGI-DEVKRLLSRLADVTQAVILELAVKEEPFYWGVSQPDDPRELIEQCAFYRL 203 (569)
T ss_dssp HHHHCH-HHHHHHHHHHHHHSSEEEEECCCTTSSSGGGGGSCSSGGGGTTTSSEEEE
T ss_pred CCHHHH-HHHHHHHHHhccccceeeEEeccccccccccCCCCccHHHhcCHHHHHHH
Confidence 554433 3345677888999887776654322211 2235566666666544
No 215
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.88 E-value=3.7e-09 Score=100.55 Aligned_cols=138 Identities=13% Similarity=0.012 Sum_probs=89.3
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHH--cC-CEEEEEecCCCchhHHH----HHhcC--CccEEEeccCc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMME--RN-ITIVTTSMNLNGPFNNF----IASRG--VVPLYISISQR 291 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~--~g-~~vvg~~iD~~a~~~~~----aa~rg--~i~~~~~d~~~ 291 (392)
...++..++...++.+| ||+|||+|..+..+++ .+ ..++++|++ ....+. +.+.| .+.++.+|...
T Consensus 71 ~s~l~~~~l~~~~g~~V---LDlgaG~G~~t~~la~~~~~~~~v~avD~~--~~~l~~~~~~~~~~g~~~v~~~~~D~~~ 145 (274)
T 3ajd_A 71 SSMIPPIVLNPREDDFI---LDMCAAPGGKTTHLAQLMKNKGTIVAVEIS--KTRTKALKSNINRMGVLNTIIINADMRK 145 (274)
T ss_dssp GGGHHHHHHCCCTTCEE---EETTCTTCHHHHHHHHHTTTCSEEEEEESC--HHHHHHHHHHHHHTTCCSEEEEESCHHH
T ss_pred HHHHHHHHhCCCCcCEE---EEeCCCccHHHHHHHHHcCCCCEEEEECCC--HHHHHHHHHHHHHhCCCcEEEEeCChHh
Confidence 34455556666666666 9999999999999998 34 688885544 344432 22234 36788888877
Q ss_pred CCC----CCCcccEEEEccccccc---C------C------chhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHH
Q 047630 292 LPF----FDNTLDIVHSMHVLSNW---I------P------TTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVP 352 (392)
Q Consensus 292 Lpf----~d~sFDlV~s~~~l~~~---~------~------~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ 352 (392)
++. .+++||+|++....... . . ......++.++.++|||||++++.......++..+.+..
T Consensus 146 ~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~ 225 (274)
T 3ajd_A 146 YKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKY 225 (274)
T ss_dssp HHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHH
T ss_pred cchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHH
Confidence 654 26789999987322110 0 0 022357999999999999999998754433333455666
Q ss_pred HHHH-cCCeEEE
Q 047630 353 LIES-VGFNKLK 363 (392)
Q Consensus 353 ll~~-aGf~~i~ 363 (392)
.+++ .+|+.+.
T Consensus 226 ~l~~~~~~~~~~ 237 (274)
T 3ajd_A 226 ILQKRNDVELII 237 (274)
T ss_dssp HHHHCSSEEEEC
T ss_pred HHHhCCCcEEec
Confidence 6655 3565544
No 216
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.87 E-value=4.8e-09 Score=102.32 Aligned_cols=98 Identities=12% Similarity=0.132 Sum_probs=65.8
Q ss_pred HHhhCCCCcccEEEEEcCCcchHHHHHHHc-C--CEEEEEecCCCchhHHHHHhc-----------------CCccEEEe
Q 047630 228 VLATKKPGTIRIGLDIGGGVATFAVRMMER-N--ITIVTTSMNLNGPFNNFIASR-----------------GVVPLYIS 287 (392)
Q Consensus 228 ll~l~~~~~ir~VLDIGCGtG~~a~~La~~-g--~~vvg~~iD~~a~~~~~aa~r-----------------g~i~~~~~ 287 (392)
.+.+.++.+| ||+|||+|.++..+++. + ..++++| ++....+.+.++ ..+.+..+
T Consensus 100 ~l~~~~g~~V---LDiG~G~G~~~~~la~~~g~~~~v~~vD--~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 100 MMDINPGDTV---LEAGSGSGGMSLFLSKAVGSQGRVISFE--VRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHTCCTTCEE---EEECCTTSHHHHHHHHHHCTTCEEEEEE--SSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred hcCCCCCCEE---EEeCCCcCHHHHHHHHHhCCCceEEEEe--CCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 3445565555 99999999999999986 5 6788855 434444322221 24788889
Q ss_pred ccCcC--CCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 288 ISQRL--PFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 288 d~~~L--pf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
|+..+ ++++++||+|++...- . . .++.++.++|||||.|++..
T Consensus 175 d~~~~~~~~~~~~fD~V~~~~~~-~----~---~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 175 DISGATEDIKSLTFDAVALDMLN-P----H---VTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp CTTCCC-------EEEEEECSSS-T----T---TTHHHHGGGEEEEEEEEEEE
T ss_pred ChHHcccccCCCCeeEEEECCCC-H----H---HHHHHHHHhcCCCcEEEEEe
Confidence 98776 5667889999985432 2 1 27899999999999998765
No 217
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.86 E-value=3.5e-09 Score=96.85 Aligned_cols=108 Identities=13% Similarity=0.104 Sum_probs=74.7
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHH----hcC---CccEEEeccCc
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIA----SRG---VVPLYISISQR 291 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa----~rg---~i~~~~~d~~~ 291 (392)
..++..+....++.+| ||+|||+|..+..+++. +..++++|++. ...+.+. +.+ .+.++.+|+..
T Consensus 58 ~~~l~~l~~~~~~~~v---LdiG~G~G~~~~~la~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 132 (229)
T 2avd_A 58 AQLLANLARLIQAKKA---LDLGTFTGYSALALALALPADGRVVTCEVDA--QPPELGRPLWRQAEAEHKIDLRLKPALE 132 (229)
T ss_dssp HHHHHHHHHHTTCCEE---EEECCTTSHHHHHHHTTSCTTCEEEEEESCS--HHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHhcCCCEE---EEEcCCccHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHCCCCCeEEEEEcCHHH
Confidence 3355555556555555 99999999999999984 56888865543 4443322 223 36788887644
Q ss_pred C-C-CCC----CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec
Q 047630 292 L-P-FFD----NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 292 L-p-f~d----~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~ 340 (392)
. + +.+ ++||+|++.... .....+++++.++|||||++++++..
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~~------~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDADK------ENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSCS------TTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred HHHHHHhcCCCCCccEEEECCCH------HHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 3 1 111 689999986542 33457899999999999999998754
No 218
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.86 E-value=6.2e-08 Score=93.46 Aligned_cols=122 Identities=19% Similarity=0.190 Sum_probs=75.4
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh-----------cCCccEEEeccCcC-CCCCCcccEEE
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS-----------RGVVPLYISISQRL-PFFDNTLDIVH 303 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~-----------rg~i~~~~~d~~~L-pf~d~sFDlV~ 303 (392)
+.|||||||+|..+..+++. ...++++|+|. ...+.+.+ ...+.++++|.... ...+++||+|+
T Consensus 85 ~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~--~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 85 KHVLIIGGGDGAMLREVTRHKNVESITMVEIDA--GVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CEEEEESCTTCHHHHHHHTCTTCCEEEEECSCT--THHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CEEEEEeCChhHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 44599999999999999986 35688855544 44443222 12478899987654 44578999999
Q ss_pred EcccccccCCchhH--HHHHHHHHHcccCCcEEEEEee--cccccchHHHHHHHHHHcCCeEEEE
Q 047630 304 SMHVLSNWIPTTLL--HFLMFDIYRVLRPGGLFWLDHF--FCVGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 304 s~~~l~~~~~~~~l--~~~L~el~RvLKPGG~lii~~~--~~~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
+...- ++.+...+ ..+++++.|+|||||+|++... ....+.... +.+.+++. |..+..
T Consensus 163 ~D~~~-p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~-~~~~l~~~-F~~v~~ 224 (294)
T 3adn_A 163 SDCTD-PIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAID-SHRKLSHY-FSDVGF 224 (294)
T ss_dssp ECC-----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHH-HHHHHHHH-CSEEEE
T ss_pred ECCCC-ccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHH-HHHHHHHH-CCCeEE
Confidence 96443 22333322 5799999999999999988752 111222333 44445555 665543
No 219
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.85 E-value=5.6e-08 Score=87.31 Aligned_cols=116 Identities=8% Similarity=0.133 Sum_probs=78.6
Q ss_pred EEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhc----C-CccEEEeccCcCCCCCCcccEEEEcccccccC
Q 047630 239 IGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASR----G-VVPLYISISQRLPFFDNTLDIVHSMHVLSNWI 312 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~r----g-~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~ 312 (392)
.|||+|||+|.++..+++.+. .++++| ++....+.+.++ + .+.++++|+..++ ++||+|+++..++.+.
T Consensus 52 ~vlD~g~G~G~~~~~l~~~~~~~v~~vD--~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 52 VVADLGAGTGVLSYGALLLGAKEVICVE--VDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQR 126 (207)
T ss_dssp EEEEETCTTCHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSSS
T ss_pred EEEEeeCCCCHHHHHHHHcCCCEEEEEE--CCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCcccc
Confidence 349999999999999999865 688855 433444433332 2 3678889988875 4899999998876653
Q ss_pred CchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEE
Q 047630 313 PTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 313 ~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
. .....+++++.+++ ||.+++. .. .....+.+.+.+++.||+.....
T Consensus 127 ~-~~~~~~l~~~~~~l--~~~~~~~-~~--~~~~~~~~~~~l~~~g~~~~~~~ 173 (207)
T 1wy7_A 127 K-HADRPFLLKAFEIS--DVVYSIH-LA--KPEVRRFIEKFSWEHGFVVTHRL 173 (207)
T ss_dssp T-TTTHHHHHHHHHHC--SEEEEEE-EC--CHHHHHHHHHHHHHTTEEEEEEE
T ss_pred C-CchHHHHHHHHHhc--CcEEEEE-eC--CcCCHHHHHHHHHHCCCeEEEEE
Confidence 3 33356889999998 5544333 11 12223446778889998765433
No 220
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.85 E-value=2.6e-09 Score=98.03 Aligned_cols=94 Identities=14% Similarity=0.153 Sum_probs=68.0
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc-C-------CEEEEEecCCCchhHHHHHh-----------cCCccEEEeccCc
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER-N-------ITIVTTSMNLNGPFNNFIAS-----------RGVVPLYISISQR 291 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~-g-------~~vvg~~iD~~a~~~~~aa~-----------rg~i~~~~~d~~~ 291 (392)
+.++.+| ||||||+|.++..+++. + ..++++| ++....+.+.+ ...+.+..+|...
T Consensus 82 ~~~~~~V---LdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD--~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 156 (227)
T 1r18_A 82 LKPGARI---LDVGSGSGYLTACFYRYIKAKGVDADTRIVGIE--HQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK 156 (227)
T ss_dssp CCTTCEE---EEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEE--SCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG
T ss_pred CCCCCEE---EEECCCccHHHHHHHHhcccccCCccCEEEEEE--cCHHHHHHHHHHHHhcCccccCCCceEEEECCccc
Confidence 3444455 99999999999999883 3 4888855 43344432221 1246788888776
Q ss_pred CCCCC-CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 292 LPFFD-NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 292 Lpf~d-~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
++++ ++||+|++..+++++ +.++.++|||||++++...
T Consensus 157 -~~~~~~~fD~I~~~~~~~~~---------~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 157 -GYPPNAPYNAIHVGAAAPDT---------PTELINQLASGGRLIVPVG 195 (227)
T ss_dssp -CCGGGCSEEEEEECSCBSSC---------CHHHHHTEEEEEEEEEEES
T ss_pred -CCCcCCCccEEEECCchHHH---------HHHHHHHhcCCCEEEEEEe
Confidence 4444 789999999988764 3788999999999998853
No 221
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.81 E-value=1.1e-08 Score=99.17 Aligned_cols=124 Identities=12% Similarity=0.118 Sum_probs=77.7
Q ss_pred cEEEEEcCCcchHHHHHHHcC--CEEEEEecCCCchhHHHHHh----------cCCccEEEeccCc-CCCCCCcccEEEE
Q 047630 238 RIGLDIGGGVATFAVRMMERN--ITIVTTSMNLNGPFNNFIAS----------RGVVPLYISISQR-LPFFDNTLDIVHS 304 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~g--~~vvg~~iD~~a~~~~~aa~----------rg~i~~~~~d~~~-Lpf~d~sFDlV~s 304 (392)
+.|||||||+|.++..+++.. ..++++|+| ....+.+.+ ...+.++.+|+.. ++..+++||+|++
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid--~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 97 RKVLIIGGGDGGVLREVVKHPSVESVVQCEID--EDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp CEEEEEECTTSHHHHHHTTCTTCCEEEEEESC--HHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 455999999999999999864 578885544 444443222 1236788888765 4445788999998
Q ss_pred cccccccCCch--hHHHHHHHHHHcccCCcEEEEEeecc-cccchHHHHHHHHHHcCCeEEEEE
Q 047630 305 MHVLSNWIPTT--LLHFLMFDIYRVLRPGGLFWLDHFFC-VGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 305 ~~~l~~~~~~~--~l~~~L~el~RvLKPGG~lii~~~~~-~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
.... ++.+.. ....+++++.++|||||+|++..... ...+....+.+.+++. |..+...
T Consensus 175 d~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~~v~~~ 236 (304)
T 2o07_A 175 DSSD-PMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSL-FPVVAYA 236 (304)
T ss_dssp ECC------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHH-CSEEEEE
T ss_pred CCCC-CCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHh-CCCceeE
Confidence 6543 222211 12468999999999999999876321 1222333455555555 6655443
No 222
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.81 E-value=1.7e-08 Score=98.87 Aligned_cols=118 Identities=14% Similarity=0.060 Sum_probs=82.7
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHH----HHHhcC---CccEEEeccCcCCCCCCcccEEEE
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNN----FIASRG---VVPLYISISQRLPFFDNTLDIVHS 304 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~----~aa~rg---~i~~~~~d~~~Lpf~d~sFDlV~s 304 (392)
.++.++ ||+|||+|.++.. ++.+..|+++|++ ....+ .+..++ .+.++.+|+..+. ++||+|++
T Consensus 194 ~~~~~V---LDlg~G~G~~~l~-a~~~~~V~~vD~s--~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVV---VDMFAGVGPFSIA-CKNAKKIYAIDIN--PHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIM 264 (336)
T ss_dssp CTTCEE---EETTCTTSHHHHH-TTTSSEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEE
T ss_pred CCCCEE---EEccCccCHHHHh-ccCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEE
Confidence 344555 9999999999999 8877789885544 33333 233333 3678899988765 78999998
Q ss_pred cccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHc-CCeEEEEEEeec
Q 047630 305 MHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESV-GFNKLKWVVGRK 369 (392)
Q Consensus 305 ~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~a-Gf~~i~w~~~~k 369 (392)
...... ..++.++.++|+|||.+++..+.... +...+.++++ |++.+....+..
T Consensus 265 dpP~~~-------~~~l~~~~~~L~~gG~l~~~~~~~~~----~~~~~~l~~~~~~~i~~~~~v~~ 319 (336)
T 2yx1_A 265 NLPKFA-------HKFIDKALDIVEEGGVIHYYTIGKDF----DKAIKLFEKKCDCEVLEKRIVKS 319 (336)
T ss_dssp CCTTTG-------GGGHHHHHHHEEEEEEEEEEEEESSS----HHHHHHHHHHSEEEEEEEEEEEE
T ss_pred CCcHhH-------HHHHHHHHHHcCCCCEEEEEEeecCc----hHHHHHHHHhcCCcEEEEEEEec
Confidence 643211 25889999999999999988776652 2345566666 777766665543
No 223
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.80 E-value=3.1e-08 Score=94.95 Aligned_cols=117 Identities=10% Similarity=0.143 Sum_probs=82.3
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHH----HHHhcC---CccEEEeccCcCCCCCCcccEEE
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNN----FIASRG---VVPLYISISQRLPFFDNTLDIVH 303 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~----~aa~rg---~i~~~~~d~~~Lpf~d~sFDlV~ 303 (392)
.++..| ||+|||+|.++..+++.+ ..|+++|+|. ...+ ++..++ .+.++.+|+..++ ..+.||.|+
T Consensus 124 ~~g~~V---lD~~aG~G~~~i~~a~~g~~~V~avD~np--~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi 197 (278)
T 3k6r_A 124 KPDELV---VDMFAGIGHLSLPIAVYGKAKVIAIEKDP--YTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRIL 197 (278)
T ss_dssp CTTCEE---EETTCTTTTTTHHHHHHTCCEEEEECCCH--HHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEE
T ss_pred CCCCEE---EEecCcCcHHHHHHHHhcCCeEEEEECCH--HHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEE
Confidence 445555 999999999999999877 5888855443 3333 334444 3678888988876 467899999
Q ss_pred EcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccc---cchHHHHHHHHHHcCCeE
Q 047630 304 SMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG---AQLEDVYVPLIESVGFNK 361 (392)
Q Consensus 304 s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~---~~l~~~l~~ll~~aGf~~ 361 (392)
+...... ..++..+.++||+||++.+..+.... ....+.+.+..++.|++.
T Consensus 198 ~~~p~~~-------~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v 251 (278)
T 3k6r_A 198 MGYVVRT-------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp ECCCSSG-------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEE
T ss_pred ECCCCcH-------HHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcE
Confidence 7654321 24778888999999999776654332 223456778888999875
No 224
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.79 E-value=4.3e-08 Score=93.45 Aligned_cols=123 Identities=13% Similarity=0.111 Sum_probs=80.0
Q ss_pred cEEEEEcCCcchHHHHHHHc-C-CEEEEEecCCCchhHHHHHh----------cCCccEEEeccCc-CCCCCCcccEEEE
Q 047630 238 RIGLDIGGGVATFAVRMMER-N-ITIVTTSMNLNGPFNNFIAS----------RGVVPLYISISQR-LPFFDNTLDIVHS 304 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~-g-~~vvg~~iD~~a~~~~~aa~----------rg~i~~~~~d~~~-Lpf~d~sFDlV~s 304 (392)
+.|||||||+|.++..+++. + ..++++|+| ....+.+.+ ...+.++.+|+.. ++..+++||+|++
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid--~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 77 EHVLVVGGGDGGVIREILKHPSVKKATLVDID--GKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp CEEEEESCTTCHHHHHHTTCTTCSEEEEEESC--HHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CEEEEECCchHHHHHHHHhCCCCceEEEEECC--HHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 44599999999999999986 3 578885554 344433222 1236788888665 3445688999999
Q ss_pred cccccccCCchh--HHHHHHHHHHcccCCcEEEEEeecc-cccchHHHHHHHHHHcCCeEEEE
Q 047630 305 MHVLSNWIPTTL--LHFLMFDIYRVLRPGGLFWLDHFFC-VGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 305 ~~~l~~~~~~~~--l~~~L~el~RvLKPGG~lii~~~~~-~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
.... ++.+... ...+++++.++|||||++++..... ...+....+.+.+++. |..+..
T Consensus 155 d~~~-~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 215 (275)
T 1iy9_A 155 DSTE-PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-FPITKL 215 (275)
T ss_dssp SCSS-CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEE
T ss_pred CCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh-CCCeEE
Confidence 6543 3222211 1468999999999999998874321 1122234455667776 665543
No 225
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.79 E-value=1.9e-08 Score=100.45 Aligned_cols=128 Identities=13% Similarity=0.011 Sum_probs=85.3
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHH----HHHhcC----CccEEEeccCcC-CC---CCCc
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNN----FIASRG----VVPLYISISQRL-PF---FDNT 298 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~----~aa~rg----~i~~~~~d~~~L-pf---~d~s 298 (392)
.++.+| ||+|||+|.++..+++.+. .|+++|++. .+.+ .+..++ .+.++++|+.++ +. ..++
T Consensus 211 ~~~~~V---LDl~cGtG~~sl~la~~ga~~V~~vD~s~--~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~ 285 (385)
T 2b78_A 211 AAGKTV---LNLFSYTAAFSVAAAMGGAMATTSVDLAK--RSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLT 285 (385)
T ss_dssp TBTCEE---EEETCTTTHHHHHHHHTTBSEEEEEESCT--THHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred cCCCeE---EEEeeccCHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCC
Confidence 344445 9999999999999999775 799966655 3333 333333 367888887652 21 2458
Q ss_pred ccEEEEccccc-----cc-CCchhHHHHHHHHHHcccCCcEEEEEeecccc--cchHHHHHHHHHHcCCeEEEE
Q 047630 299 LDIVHSMHVLS-----NW-IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVG--AQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 299 FDlV~s~~~l~-----~~-~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~--~~l~~~l~~ll~~aGf~~i~w 364 (392)
||+|++..... .. ........++.++.++|+|||++++....... +...+.+.+.+.++|.+.+..
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~ 359 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDL 359 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 99999864432 11 11134456788899999999999988754332 334555667778888884443
No 226
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.77 E-value=1.4e-07 Score=94.04 Aligned_cols=115 Identities=10% Similarity=-0.001 Sum_probs=77.3
Q ss_pred EEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCC--
Q 047630 239 IGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIP-- 313 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~-- 313 (392)
.|||+|||+|.++..++++ +..++|+|+|..+ .+.+ ..+.++++|....+ .++.||+|+++-.+.....
T Consensus 42 ~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~--~~~a---~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~ 115 (421)
T 2ih2_A 42 RVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKA--LDLP---PWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEAS 115 (421)
T ss_dssp EEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTT--CCCC---TTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCTT
T ss_pred EEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHH--HHhC---CCCcEEeCChhhcC-ccCCCCEEEECcCccCccccc
Confidence 4599999999999999983 5789997766522 2211 23678888887765 3568999999754432211
Q ss_pred -------chh-----------------HHHHHHHHHHcccCCcEEEEEeeccc-ccchHHHHHHHHHHcCC
Q 047630 314 -------TTL-----------------LHFLMFDIYRVLRPGGLFWLDHFFCV-GAQLEDVYVPLIESVGF 359 (392)
Q Consensus 314 -------~~~-----------------l~~~L~el~RvLKPGG~lii~~~~~~-~~~l~~~l~~ll~~aGf 359 (392)
.+. ...+++.+.++|+|||++++...... .....+.+++.+.+.|+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 116 KYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp TCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred ccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 111 12578999999999999977754321 11122447778877776
No 227
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.77 E-value=1.5e-08 Score=97.76 Aligned_cols=124 Identities=14% Similarity=0.079 Sum_probs=76.2
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh----------cCCccEEEeccCc-CCCCCCcccEEEE
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS----------RGVVPLYISISQR-LPFFDNTLDIVHS 304 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~----------rg~i~~~~~d~~~-Lpf~d~sFDlV~s 304 (392)
..|||||||+|.++..+++. ...++++|+| ....+.+.+ ...+.++++|+.. ++..+++||+|++
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid--~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSVEKAILCEVD--GLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTCSEEEEEESC--HHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhcCCCCEEEEEECC--HHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 34599999999999999986 3578885554 344332222 1236788888655 3445678999998
Q ss_pred cccccccCCch--hHHHHHHHHHHcccCCcEEEEEeecc-cccchHHHHHHHHHHcCCeEEEE
Q 047630 305 MHVLSNWIPTT--LLHFLMFDIYRVLRPGGLFWLDHFFC-VGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 305 ~~~l~~~~~~~--~l~~~L~el~RvLKPGG~lii~~~~~-~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
...-....+.. ....+++++.++|||||+|++..... ...+....+.+.+++. |..+..
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 231 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKV-FPITRV 231 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH-CSEEEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHH-CCceEE
Confidence 53321011111 11578999999999999999874221 1122233355556665 665543
No 228
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.76 E-value=1.7e-08 Score=93.87 Aligned_cols=108 Identities=10% Similarity=0.022 Sum_probs=75.3
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHH----HhcCC---ccEEEeccC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFI----ASRGV---VPLYISISQ 290 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~a----a~rg~---i~~~~~d~~ 290 (392)
...++..++...+..+| ||||||+|..+..+++. +..++++|+| ....+.+ .+.+. +.++++|+.
T Consensus 58 ~~~~l~~l~~~~~~~~V---LeiG~G~G~~~~~la~~~~~~~~v~~iD~~--~~~~~~a~~~~~~~g~~~~i~~~~gda~ 132 (237)
T 3c3y_A 58 AGQLMSFVLKLVNAKKT---IEVGVFTGYSLLLTALSIPDDGKITAIDFD--REAYEIGLPFIRKAGVEHKINFIESDAM 132 (237)
T ss_dssp HHHHHHHHHHHTTCCEE---EEECCTTSHHHHHHHHHSCTTCEEEEEESC--HHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHhhCCCEE---EEeCCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 34456666655555555 99999999999999985 6788885544 3444322 22342 678888865
Q ss_pred cC-C-C-----CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 291 RL-P-F-----FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 291 ~L-p-f-----~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
.. + + .+++||+|++... ......+++++.++|||||++++++.
T Consensus 133 ~~l~~l~~~~~~~~~fD~I~~d~~------~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 133 LALDNLLQGQESEGSYDFGFVDAD------KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp HHHHHHHHSTTCTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred HHHHHHHhccCCCCCcCEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 43 2 1 2578999997643 23456799999999999999999874
No 229
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.76 E-value=3.6e-08 Score=101.36 Aligned_cols=133 Identities=17% Similarity=0.198 Sum_probs=87.7
Q ss_pred HHHHHHHHHhhC--CCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHHHH----HhcC--CccEEEecc
Q 047630 221 LDFSIDEVLATK--KPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNNFI----ASRG--VVPLYISIS 289 (392)
Q Consensus 221 ~~~lI~~ll~l~--~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~~a----a~rg--~i~~~~~d~ 289 (392)
...++..++... ++.+| ||+|||+|..+..+++. +..|++ +|++......+ .+.| .+.++++|.
T Consensus 103 ~s~l~~~~L~~~~~~g~~V---LDl~aGpG~kt~~lA~~~~~~g~V~a--vDis~~~l~~~~~n~~r~g~~nv~~~~~D~ 177 (479)
T 2frx_A 103 SSMLPVAALFADGNAPQRV---MDVAAAPGSKTTQISARMNNEGAILA--NEFSASRVKVLHANISRCGISNVALTHFDG 177 (479)
T ss_dssp HHHHHHHHHTTTTCCCSEE---EESSCTTSHHHHHHHHHTTTCSEEEE--ECSSHHHHHHHHHHHHHHTCCSEEEECCCS
T ss_pred HHHHHHHHhCcccCCCCEE---EEeCCCCCHHHHHHHHhCCCCCEEEE--EECCHHHHHHHHHHHHHcCCCcEEEEeCCH
Confidence 445555666655 65566 99999999999999984 357888 55544544432 2224 267788888
Q ss_pred CcCCC-CCCcccEEEEcc------cccc-------cCCc------hhHHHHHHHHHHcccCCcEEEEEeecccccchHHH
Q 047630 290 QRLPF-FDNTLDIVHSMH------VLSN-------WIPT------TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDV 349 (392)
Q Consensus 290 ~~Lpf-~d~sFDlV~s~~------~l~~-------~~~~------~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~ 349 (392)
..++. .+++||.|++.- .+.. |.+. .....+|.++.++|||||+|+++......++.++.
T Consensus 178 ~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~v 257 (479)
T 2frx_A 178 RVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAV 257 (479)
T ss_dssp TTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHH
T ss_pred HHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHH
Confidence 87764 567899999831 1211 1100 11246899999999999999998754434444455
Q ss_pred HHHHHHHcC
Q 047630 350 YVPLIESVG 358 (392)
Q Consensus 350 l~~ll~~aG 358 (392)
+..++++.+
T Consensus 258 v~~~l~~~~ 266 (479)
T 2frx_A 258 CLWLKETYP 266 (479)
T ss_dssp HHHHHHHST
T ss_pred HHHHHHHCC
Confidence 677777765
No 230
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.75 E-value=2.1e-08 Score=97.73 Aligned_cols=123 Identities=13% Similarity=0.123 Sum_probs=75.0
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc----------CCccEEEeccCc-CCCCCCcccEEEE
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR----------GVVPLYISISQR-LPFFDNTLDIVHS 304 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r----------g~i~~~~~d~~~-Lpf~d~sFDlV~s 304 (392)
+.|||||||+|..+..+++. ...+++ +|++....+.+.++ ..+.++.+|+.. ++..+++||+|++
T Consensus 110 ~~VLdIG~G~G~~~~~l~~~~~~~~v~~--vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 110 KRVLIIGGGDGGILREVLKHESVEKVTM--CEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp CEEEEESCTTSHHHHHHTTCTTCCEEEE--ECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHcCCCCEEEE--EECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 44599999999999999986 357877 55544444433322 136777888655 3335688999998
Q ss_pred cccccccCCchhH--HHHHHHHHHcccCCcEEEEEeecc-cccchHHHHHHHHHHcCCeEEEE
Q 047630 305 MHVLSNWIPTTLL--HFLMFDIYRVLRPGGLFWLDHFFC-VGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 305 ~~~l~~~~~~~~l--~~~L~el~RvLKPGG~lii~~~~~-~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
... .++.+...+ ..+++++.++|||||++++..-.. ...+....+.+.+++. |..+..
T Consensus 188 d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~v-F~~v~~ 248 (314)
T 2b2c_A 188 DSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKI-FPAVTY 248 (314)
T ss_dssp CCC--------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHH-CSEEEE
T ss_pred cCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHH-CCcceE
Confidence 653 333333322 578999999999999999875211 1122233355556665 665543
No 231
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.75 E-value=1.8e-08 Score=96.47 Aligned_cols=113 Identities=13% Similarity=0.095 Sum_probs=74.2
Q ss_pred HHHHHHHHHhhC---CCCcccEEEEEcCCcchHHHHHHHc-CCEEEEEecCCCchhHHHH----HhcCC---ccEEEecc
Q 047630 221 LDFSIDEVLATK---KPGTIRIGLDIGGGVATFAVRMMER-NITIVTTSMNLNGPFNNFI----ASRGV---VPLYISIS 289 (392)
Q Consensus 221 ~~~lI~~ll~l~---~~~~ir~VLDIGCGtG~~a~~La~~-g~~vvg~~iD~~a~~~~~a----a~rg~---i~~~~~d~ 289 (392)
.+.+++.++... ++.+| ||+|||+|.++..+++. +..++++|++ ....+.+ ...+. +.++++|.
T Consensus 108 te~lv~~~l~~~~~~~~~~v---LDlG~GsG~~~~~la~~~~~~v~~vDis--~~al~~A~~n~~~~~l~~~v~~~~~D~ 182 (284)
T 1nv8_A 108 TEELVELALELIRKYGIKTV---ADIGTGSGAIGVSVAKFSDAIVFATDVS--SKAVEIARKNAERHGVSDRFFVRKGEF 182 (284)
T ss_dssp HHHHHHHHHHHHHHHTCCEE---EEESCTTSHHHHHHHHHSSCEEEEEESC--HHHHHHHHHHHHHTTCTTSEEEEESST
T ss_pred HHHHHHHHHHHhcccCCCEE---EEEeCchhHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCceEEEECcc
Confidence 566666665432 33444 99999999999999987 7788885544 3444322 22332 78888887
Q ss_pred CcCCCCCCcc---cEEEEccccccc----------CCch------hHHHHHHHHH-HcccCCcEEEEEeec
Q 047630 290 QRLPFFDNTL---DIVHSMHVLSNW----------IPTT------LLHFLMFDIY-RVLRPGGLFWLDHFF 340 (392)
Q Consensus 290 ~~Lpf~d~sF---DlV~s~~~l~~~----------~~~~------~l~~~L~el~-RvLKPGG~lii~~~~ 340 (392)
... ++ ++| |+|+++...... .+.. +-..+++++. +.|+|||++++..-.
T Consensus 183 ~~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 183 LEP-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp TGG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred hhh-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 762 22 579 999998333211 1111 0115899999 999999999986533
No 232
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.74 E-value=4.5e-08 Score=96.13 Aligned_cols=97 Identities=19% Similarity=0.126 Sum_probs=67.6
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc----------CCccEEEeccCcC--CCCCCcccEEE
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR----------GVVPLYISISQRL--PFFDNTLDIVH 303 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r----------g~i~~~~~d~~~L--pf~d~sFDlV~ 303 (392)
+.|||||||+|.++..+++. ...++++|+| ....+.+.++ ..+.++++|+..+ .+.+++||+|+
T Consensus 122 ~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis--~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 122 KKVLVIGGGDGGVLREVARHASIEQIDMCEID--KMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CEEEEETCSSSHHHHHHTTCTTCCEEEEEESC--HHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CEEEEECCCccHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 45599999999999999986 4578885544 3444332221 2378888887653 23467899999
Q ss_pred EcccccccCCchh--HHHHHHHHHHcccCCcEEEEE
Q 047630 304 SMHVLSNWIPTTL--LHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 304 s~~~l~~~~~~~~--l~~~L~el~RvLKPGG~lii~ 337 (392)
+...- ++..... ...+++++.|+|||||+|++.
T Consensus 200 ~d~~~-p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 200 VDSSD-PIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp ECCCC-TTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCC-ccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 86432 1121121 357999999999999999996
No 233
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.74 E-value=1.2e-07 Score=92.57 Aligned_cols=123 Identities=16% Similarity=0.186 Sum_probs=78.5
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc----------CCccEEEeccCc-CCCCCCcccEEEE
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR----------GVVPLYISISQR-LPFFDNTLDIVHS 304 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r----------g~i~~~~~d~~~-Lpf~d~sFDlV~s 304 (392)
..|||||||+|.++..+++. +..++++|+| ....+.+.++ ..+.++++|... ++..+++||+|++
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis--~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYKSVENIDICEID--ETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCTTCCEEEEEESC--HHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 34599999999999999986 4678885544 3444433321 236788888655 3334678999998
Q ss_pred cccccccCCchhH--HHHHHHHHHcccCCcEEEEEeecc-cccchHHHHHHHHHHcCCeEEEE
Q 047630 305 MHVLSNWIPTTLL--HFLMFDIYRVLRPGGLFWLDHFFC-VGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 305 ~~~l~~~~~~~~l--~~~L~el~RvLKPGG~lii~~~~~-~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
... .++.+...+ +.+++++.++|||||++++..... ...+....+.+.+++. |..++.
T Consensus 196 d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 256 (321)
T 2pt6_A 196 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKVEY 256 (321)
T ss_dssp ECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTT-CSEEEE
T ss_pred CCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCCeEE
Confidence 643 222222222 579999999999999999875321 1112223355556665 555543
No 234
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.73 E-value=4.8e-08 Score=97.70 Aligned_cols=127 Identities=9% Similarity=-0.018 Sum_probs=84.3
Q ss_pred hhCCCCcccEEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHH----HHHhcCC----ccEEEeccCcCCC----CC
Q 047630 230 ATKKPGTIRIGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNN----FIASRGV----VPLYISISQRLPF----FD 296 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~----~aa~rg~----i~~~~~d~~~Lpf----~d 296 (392)
.+.++.+| ||+|||+|.++..+++.+ ..|+++|++ ....+ .+..++. +.++.+|+..+.. .+
T Consensus 217 ~~~~~~~V---LDl~cG~G~~sl~la~~g~~~V~~vD~s--~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~ 291 (396)
T 3c0k_A 217 RYVENKRV---LNCFSYTGGFAVSALMGGCSQVVSVDTS--QEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRG 291 (396)
T ss_dssp HHCTTCEE---EEESCTTCSHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTT
T ss_pred HhhCCCeE---EEeeccCCHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcC
Confidence 34455555 999999999999999986 478885544 34433 2333332 5688888766421 14
Q ss_pred CcccEEEEcccccc------cCCchhHHHHHHHHHHcccCCcEEEEEeeccccc--chHHHHHHHHHHcCCeE
Q 047630 297 NTLDIVHSMHVLSN------WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGA--QLEDVYVPLIESVGFNK 361 (392)
Q Consensus 297 ~sFDlV~s~~~l~~------~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~--~l~~~l~~ll~~aGf~~ 361 (392)
++||+|++...... .........++.++.+.|+|||++++........ ...+.+.+.+.++|++.
T Consensus 292 ~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 292 EKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDV 364 (396)
T ss_dssp CCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCE
T ss_pred CCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeE
Confidence 68999999743311 0111456689999999999999999886543322 34555666778888543
No 235
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.72 E-value=3.7e-08 Score=95.72 Aligned_cols=124 Identities=15% Similarity=0.136 Sum_probs=80.2
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh-----------cCCccEEEeccCc-CCCCCCcccEEE
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS-----------RGVVPLYISISQR-LPFFDNTLDIVH 303 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~-----------rg~i~~~~~d~~~-Lpf~d~sFDlV~ 303 (392)
+.|||||||+|.++..+++. +..++++|+| ....+.+.+ ...+.++++|+.. ++..+++||+|+
T Consensus 79 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid--~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 79 KRVLIVGGGEGATLREVLKHPTVEKAVMVDID--GELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CEEEEEECTTSHHHHHHTTSTTCCEEEEEESC--HHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CeEEEEcCCcCHHHHHHHhcCCCCEEEEEECC--HHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 34599999999999999986 4578885554 344332221 1246788888765 344578899999
Q ss_pred Eccccccc--CCchh--HHHHHHHHHHcccCCcEEEEEeecc--cccchHHHHHHHHHHcCCeEEEE
Q 047630 304 SMHVLSNW--IPTTL--LHFLMFDIYRVLRPGGLFWLDHFFC--VGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 304 s~~~l~~~--~~~~~--l~~~L~el~RvLKPGG~lii~~~~~--~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
+....+.. .+... ...+++++.++|||||+|++..... ...+....+.+.+++. |..+..
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 222 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREA-FRYVRS 222 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTT-CSEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHH-CCceEE
Confidence 97654320 11111 2579999999999999998874321 1223344466667776 655543
No 236
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.71 E-value=5.5e-08 Score=93.03 Aligned_cols=123 Identities=15% Similarity=0.169 Sum_probs=79.1
Q ss_pred cEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc----------CCccEEEeccCcC-CCCCCcccEEEE
Q 047630 238 RIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR----------GVVPLYISISQRL-PFFDNTLDIVHS 304 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r----------g~i~~~~~d~~~L-pf~d~sFDlV~s 304 (392)
+.|||||||+|..+..+++. ...++++|+| ....+.+.++ ..+.++++|.... +..+++||+|++
T Consensus 80 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid--~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 80 KNVLVVGGGDGGIIRELCKYKSVENIDICEID--ETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp CEEEEEECTTSHHHHHHTTCTTCCEEEEEESC--HHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CeEEEEeCCcCHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 45599999999999999986 3578885544 3444433322 2367888886653 333678999998
Q ss_pred cccccccCCchhH--HHHHHHHHHcccCCcEEEEEeecc-cccchHHHHHHHHHHcCCeEEEE
Q 047630 305 MHVLSNWIPTTLL--HFLMFDIYRVLRPGGLFWLDHFFC-VGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 305 ~~~l~~~~~~~~l--~~~L~el~RvLKPGG~lii~~~~~-~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
.... ++.+...+ ..+++++.++|||||++++..... ...+....+.+.+++. |..+..
T Consensus 158 d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 218 (283)
T 2i7c_A 158 DSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKVEY 218 (283)
T ss_dssp ECCC-TTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEE
T ss_pred cCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHH-CCceEE
Confidence 6433 32333333 579999999999999999874311 1122223345556655 666543
No 237
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.71 E-value=3.3e-08 Score=94.69 Aligned_cols=90 Identities=13% Similarity=0.238 Sum_probs=61.7
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----C---CccEEEeccCcCCCCCCcccEEEEccccccc
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----G---VVPLYISISQRLPFFDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~ 311 (392)
.|||||||+|.++..+++.+..++++|+| ..+.+.+.++ + .+.++.+|+..++++ +||+|+++..++.
T Consensus 31 ~VLDiG~G~G~lt~~L~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nlpy~~- 105 (285)
T 1zq9_A 31 VVLEVGPGTGNMTVKLLEKAKKVVACELD--PRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANLPYQI- 105 (285)
T ss_dssp EEEEECCTTSTTHHHHHHHSSEEEEEESC--HHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEECCGGG-
T ss_pred EEEEEcCcccHHHHHHHhhCCEEEEEECC--HHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEecCccc-
Confidence 34999999999999999999999995544 4444433322 2 367889999888765 7999999765532
Q ss_pred CCchhHHHHH--------------HHH--HHcccCCcEE
Q 047630 312 IPTTLLHFLM--------------FDI--YRVLRPGGLF 334 (392)
Q Consensus 312 ~~~~~l~~~L--------------~el--~RvLKPGG~l 334 (392)
.. ..+..++ +|+ .++|||||.+
T Consensus 106 ~~-~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~ 143 (285)
T 1zq9_A 106 SS-PFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKL 143 (285)
T ss_dssp HH-HHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTT
T ss_pred ch-HHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcc
Confidence 11 1111222 333 3799999987
No 238
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.68 E-value=1.8e-07 Score=91.57 Aligned_cols=119 Identities=13% Similarity=0.112 Sum_probs=77.2
Q ss_pred cEEEEEcCCcchHHHHHHHcC-------CEEEEEecCCCchhHHHH----HhcC-CccEEEeccCcCCCCCCcccEEEEc
Q 047630 238 RIGLDIGGGVATFAVRMMERN-------ITIVTTSMNLNGPFNNFI----ASRG-VVPLYISISQRLPFFDNTLDIVHSM 305 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~g-------~~vvg~~iD~~a~~~~~a----a~rg-~i~~~~~d~~~Lpf~d~sFDlV~s~ 305 (392)
.+|||+|||+|.++..+++.. ..++|+|+| ......+ ...| .+.+..+|... +...+.||+|+++
T Consensus 132 ~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~--~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~N 208 (344)
T 2f8l_A 132 VSILDPACGTANLLTTVINQLELKGDVDVHASGVDVD--DLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVISD 208 (344)
T ss_dssp EEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESC--HHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEEE
T ss_pred CEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECC--HHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEEC
Confidence 445999999999999888742 567775544 3333322 2233 25777888655 3346789999999
Q ss_pred ccccccCCch---------------hHHHHHHHHHHcccCCcEEEEEeeccc-ccchHHHHHHHHHHcCC
Q 047630 306 HVLSNWIPTT---------------LLHFLMFDIYRVLRPGGLFWLDHFFCV-GAQLEDVYVPLIESVGF 359 (392)
Q Consensus 306 ~~l~~~~~~~---------------~l~~~L~el~RvLKPGG~lii~~~~~~-~~~l~~~l~~ll~~aGf 359 (392)
..+.++...+ ....++.++.+.|||||++++...... .......+++.+.+.|+
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGH 278 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEE
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCe
Confidence 8875542221 112589999999999999987763211 11123457777777664
No 239
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.68 E-value=6.2e-08 Score=92.51 Aligned_cols=122 Identities=12% Similarity=0.111 Sum_probs=76.2
Q ss_pred cEEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHHHHHhc----------------CCccEEEeccCcC-CCCCCcc
Q 047630 238 RIGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNFIASR----------------GVVPLYISISQRL-PFFDNTL 299 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~~aa~r----------------g~i~~~~~d~~~L-pf~d~sF 299 (392)
..|||||||+|.++..+++.+ ..++++|+| ....+.+.++ ..+.++.+|+... +. +++|
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid--~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQHDVDEVIMVEID--EDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTSCCSEEEEEESC--HHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CeEEEEcCCcCHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 345999999999999999874 478885544 3444332221 2367788876542 33 6789
Q ss_pred cEEEEcccccccCCchhH--HHHHHHHHHcccCCcEEEEEeecc-cccchHHHHHHHHHHcCCeEEEE
Q 047630 300 DIVHSMHVLSNWIPTTLL--HFLMFDIYRVLRPGGLFWLDHFFC-VGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l--~~~L~el~RvLKPGG~lii~~~~~-~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
|+|++.... ++.+...+ ..+++++.++|||||++++..... ...+....+.+.+++. |..+..
T Consensus 154 D~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~~v~~ 219 (281)
T 1mjf_A 154 DVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKV-FDRVYY 219 (281)
T ss_dssp EEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHH-CSEEEE
T ss_pred eEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCceEE
Confidence 999986543 32222222 578999999999999998874321 1222233355555555 665544
No 240
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.65 E-value=4e-08 Score=97.82 Aligned_cols=120 Identities=11% Similarity=-0.027 Sum_probs=80.0
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHH----HHhcCC--ccEEEeccCcCCC----CCCcccEEEEcccc
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNF----IASRGV--VPLYISISQRLPF----FDNTLDIVHSMHVL 308 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~----aa~rg~--i~~~~~d~~~Lpf----~d~sFDlV~s~~~l 308 (392)
.|||+|||+|.++..+++.+..|+++|++ ....+. +..++. +.++++|+..+.. .+++||+|++....
T Consensus 212 ~VLDlg~G~G~~~~~la~~~~~v~~vD~s--~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~ 289 (382)
T 1wxx_A 212 RALDVFSYAGGFALHLALGFREVVAVDSS--AEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPA 289 (382)
T ss_dssp EEEEETCTTTHHHHHHHHHEEEEEEEESC--HHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred eEEEeeeccCHHHHHHHHhCCEEEEEECC--HHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCC
Confidence 34999999999999999886678885543 344432 333342 6788888766422 25789999986433
Q ss_pred cccCC------chhHHHHHHHHHHcccCCcEEEEEeecccc--cchHHHHHHHHHHcCCe
Q 047630 309 SNWIP------TTLLHFLMFDIYRVLRPGGLFWLDHFFCVG--AQLEDVYVPLIESVGFN 360 (392)
Q Consensus 309 ~~~~~------~~~l~~~L~el~RvLKPGG~lii~~~~~~~--~~l~~~l~~ll~~aGf~ 360 (392)
..... ......++.++.++|+|||++++....... +...+.+.+.+.+.|.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 349 (382)
T 1wxx_A 290 FAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRL 349 (382)
T ss_dssp SCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCC
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCe
Confidence 22111 134567899999999999999988754322 22345566677777743
No 241
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.65 E-value=3.1e-07 Score=93.08 Aligned_cols=148 Identities=15% Similarity=0.135 Sum_probs=92.0
Q ss_pred HHHHHHHHHhh---CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHH----HHhcC--CccEEEeccCc
Q 047630 221 LDFSIDEVLAT---KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNF----IASRG--VVPLYISISQR 291 (392)
Q Consensus 221 ~~~lI~~ll~l---~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~----aa~rg--~i~~~~~d~~~ 291 (392)
.+.+++.++.. .++.+ |||+|||+|.++..+++.+..|+|+|++ ....+. +...+ .+.++.+|+..
T Consensus 271 ~e~l~~~~~~~l~~~~~~~---VLDlgcG~G~~~~~la~~~~~V~gvD~s--~~al~~A~~n~~~~~~~~v~f~~~d~~~ 345 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDR---VLDLFCGMGNFTLPLATQAASVVGVEGV--PALVEKGQQNARLNGLQNVTFYHENLEE 345 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCE---EEEESCTTTTTHHHHHTTSSEEEEEESC--HHHHHHHHHHHHHTTCCSEEEEECCTTS
T ss_pred HHHHHHHHHHhhcCCCCCE---EEECCCCCCHHHHHHHhhCCEEEEEeCC--HHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 45566665543 23344 4999999999999999998899995544 344332 22333 37889998776
Q ss_pred ----CCCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEe
Q 047630 292 ----LPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 292 ----Lpf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
+++.+++||+|++....... ..+++.+.+ ++|+++++++.- ...+.... ..+.+.||+..+....
T Consensus 346 ~l~~~~~~~~~fD~Vv~dPPr~g~------~~~~~~l~~-~~p~~ivyvsc~---p~tlard~-~~l~~~Gy~~~~~~~~ 414 (433)
T 1uwv_A 346 DVTKQPWAKNGFDKVLLDPARAGA------AGVMQQIIK-LEPIRIVYVSCN---PATLARDS-EALLKAGYTIARLAML 414 (433)
T ss_dssp CCSSSGGGTTCCSEEEECCCTTCC------HHHHHHHHH-HCCSEEEEEESC---HHHHHHHH-HHHHHTTCEEEEEEEE
T ss_pred HhhhhhhhcCCCCEEEECCCCccH------HHHHHHHHh-cCCCeEEEEECC---hHHHHhhH-HHHHHCCcEEEEEEEe
Confidence 45667899999986544322 235555543 789999888642 22333323 3556779998876655
Q ss_pred eccCCCCcccceeeEEEEEc
Q 047630 368 RKLDRGPELREMYLSALLEK 387 (392)
Q Consensus 368 ~k~d~~~~~~e~ylsai~~K 387 (392)
.-.-. ...-|. .++++|
T Consensus 415 d~Fp~-t~HvE~--v~ll~r 431 (433)
T 1uwv_A 415 DMFPH-TGHLES--MVLFSR 431 (433)
T ss_dssp CCSTT-SSCCEE--EEEEEC
T ss_pred ccCCC-CCeEEE--EEEEEE
Confidence 43221 123343 356665
No 242
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.64 E-value=2.1e-07 Score=93.27 Aligned_cols=123 Identities=16% Similarity=0.104 Sum_probs=80.0
Q ss_pred CCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHH----HHhcCC-ccEEEeccCcC-CCCCCcccEEEEccc
Q 047630 234 PGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNF----IASRGV-VPLYISISQRL-PFFDNTLDIVHSMHV 307 (392)
Q Consensus 234 ~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~----aa~rg~-i~~~~~d~~~L-pf~d~sFDlV~s~~~ 307 (392)
+.+| ||+|||+|.++..+++.|..|+++|++ ..+.+. +..++. ..+.++|+..+ +...+.||+|++...
T Consensus 215 g~~V---LDlg~GtG~~sl~~a~~ga~V~avDis--~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 215 GERV---LDVYSYVGGFALRAARKGAYALAVDKD--LEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp TCEE---EEESCTTTHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred CCeE---EEcccchhHHHHHHHHcCCeEEEEECC--HHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCC
Confidence 5555 999999999999999999888885544 344432 333343 24667776653 222344999998744
Q ss_pred ccccCC------chhHHHHHHHHHHcccCCcEEEEEeeccc--ccchHHHHHHHHHHcCCeE
Q 047630 308 LSNWIP------TTLLHFLMFDIYRVLRPGGLFWLDHFFCV--GAQLEDVYVPLIESVGFNK 361 (392)
Q Consensus 308 l~~~~~------~~~l~~~L~el~RvLKPGG~lii~~~~~~--~~~l~~~l~~ll~~aGf~~ 361 (392)
...-.. ......++..+.++|||||+|++...... .+...+.+.+.+.++|.+.
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~ 351 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRL 351 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCE
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeE
Confidence 311000 12345789999999999999987765433 2334455667777777543
No 243
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.63 E-value=6.5e-08 Score=96.66 Aligned_cols=122 Identities=11% Similarity=0.002 Sum_probs=80.3
Q ss_pred CCCcccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHH----HHHhcC---CccEEEeccCcCCC----CCCccc
Q 047630 233 KPGTIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNN----FIASRG---VVPLYISISQRLPF----FDNTLD 300 (392)
Q Consensus 233 ~~~~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~----~aa~rg---~i~~~~~d~~~Lpf----~d~sFD 300 (392)
++.+| ||+|||+|.++..+++.+. .|+++|++ ....+ .+..++ .+.++.+|+..+.. .+++||
T Consensus 217 ~~~~V---LDl~~G~G~~~~~la~~g~~~v~~vD~s--~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 217 PGDRV---LDVFTYTGGFAIHAAIAGADEVIGIDKS--PRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp TTCEE---EETTCTTTHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeE---EEecCCCCHHHHHHHHCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCC
Confidence 44445 9999999999999999865 88885544 33333 233334 36788888766422 257899
Q ss_pred EEEEcccccccCC------chhHHHHHHHHHHcccCCcEEEEEeecccc--cchHHHHHHHHHHcCC
Q 047630 301 IVHSMHVLSNWIP------TTLLHFLMFDIYRVLRPGGLFWLDHFFCVG--AQLEDVYVPLIESVGF 359 (392)
Q Consensus 301 lV~s~~~l~~~~~------~~~l~~~L~el~RvLKPGG~lii~~~~~~~--~~l~~~l~~ll~~aGf 359 (392)
+|++......... ......++.++.++|||||++++....... +...+.+.+.+.+.|.
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~ 358 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGK 358 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTE
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCC
Confidence 9998643321100 134567899999999999999888654322 2234445566666663
No 244
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.61 E-value=7.5e-08 Score=103.41 Aligned_cols=122 Identities=15% Similarity=0.065 Sum_probs=82.1
Q ss_pred hhCCCCcccEEEEEcCCcchHHHHHHHcCCE-EEEEecCCCchhHH----HHHhcC----CccEEEeccCc-CCCCCCcc
Q 047630 230 ATKKPGTIRIGLDIGGGVATFAVRMMERNIT-IVTTSMNLNGPFNN----FIASRG----VVPLYISISQR-LPFFDNTL 299 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~-vvg~~iD~~a~~~~----~aa~rg----~i~~~~~d~~~-Lpf~d~sF 299 (392)
.+.++.+| ||+|||+|.++..++..|.. |+++|++ ....+ .+..++ .+.++++|+.. ++...++|
T Consensus 536 ~~~~g~~V---LDlg~GtG~~sl~aa~~ga~~V~aVD~s--~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~f 610 (703)
T 3v97_A 536 QMSKGKDF---LNLFSYTGSATVHAGLGGARSTTTVDMS--RTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQF 610 (703)
T ss_dssp HHCTTCEE---EEESCTTCHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCE
T ss_pred HhcCCCcE---EEeeechhHHHHHHHHCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCc
Confidence 34455556 99999999999999988764 8885544 34443 233333 26788888766 44456899
Q ss_pred cEEEEcccccc--------cCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCe
Q 047630 300 DIVHSMHVLSN--------WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFN 360 (392)
Q Consensus 300 DlV~s~~~l~~--------~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~ 360 (392)
|+|++...... +........++.++.++|||||+|+++.-....... .+.+++.||+
T Consensus 611 D~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~----~~~l~~~g~~ 675 (703)
T 3v97_A 611 DLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD----LDGLAKLGLK 675 (703)
T ss_dssp EEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCC----HHHHHHTTEE
T ss_pred cEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccC----HHHHHHcCCc
Confidence 99998643211 111245667899999999999999988644322222 3467788866
No 245
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.58 E-value=1.1e-07 Score=91.76 Aligned_cols=74 Identities=15% Similarity=0.291 Sum_probs=49.5
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cC--CccEEEeccCcCCCCCCcccEE
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RG--VVPLYISISQRLPFFDNTLDIV 302 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg--~i~~~~~d~~~Lpf~d~sFDlV 302 (392)
+.+.++.+| ||||||+|.++..+++.+..++++| ++..+.+.+.+ .+ .+.++.+|+..+++. +||+|
T Consensus 38 ~~~~~~~~V---LDiG~G~G~lt~~La~~~~~v~~vD--i~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~V 110 (299)
T 2h1r_A 38 AKIKSSDIV---LEIGCGTGNLTVKLLPLAKKVITID--IDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVC 110 (299)
T ss_dssp HCCCTTCEE---EEECCTTSTTHHHHTTTSSEEEEEC--SCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEE
T ss_pred cCCCCcCEE---EEEcCcCcHHHHHHHhcCCEEEEEE--CCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEE
Confidence 334444445 9999999999999999988999955 54444443322 22 367888898887753 79999
Q ss_pred EEccccc
Q 047630 303 HSMHVLS 309 (392)
Q Consensus 303 ~s~~~l~ 309 (392)
+++..++
T Consensus 111 v~n~py~ 117 (299)
T 2h1r_A 111 TANIPYK 117 (299)
T ss_dssp EEECCGG
T ss_pred EEcCCcc
Confidence 9976653
No 246
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.53 E-value=1.7e-08 Score=94.18 Aligned_cols=94 Identities=13% Similarity=0.104 Sum_probs=62.4
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----CCccEEEeccCcCCCCC-CcccEEEEcccccccCC
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----GVVPLYISISQRLPFFD-NTLDIVHSMHVLSNWIP 313 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g~i~~~~~d~~~Lpf~d-~sFDlV~s~~~l~~~~~ 313 (392)
.|||+|||+|.++..+++.+..++| +|++..+.+.+.++ ..+.++++|+..+++++ ++| .|+++..++. .
T Consensus 32 ~VLDiG~G~G~~~~~l~~~~~~v~~--id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~--~ 106 (245)
T 1yub_A 32 TVYEIGTGKGHLTTKLAKISKQVTS--IELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHL--S 106 (245)
T ss_dssp EEEECSCCCSSCSHHHHHHSSEEEE--SSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSS--C
T ss_pred EEEEEeCCCCHHHHHHHHhCCeEEE--EECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCccc--c
Confidence 3499999999999999998888988 44533433322222 23678889999988774 688 6777643321 1
Q ss_pred chhHHH----------HH----HHHHHcccCCcEEEEE
Q 047630 314 TTLLHF----------LM----FDIYRVLRPGGLFWLD 337 (392)
Q Consensus 314 ~~~l~~----------~L----~el~RvLKPGG~lii~ 337 (392)
...+.. ++ +.+.|+|||||.+.+.
T Consensus 107 ~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 107 TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 111111 33 6689999999987443
No 247
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.53 E-value=3.3e-07 Score=86.85 Aligned_cols=135 Identities=9% Similarity=0.035 Sum_probs=85.3
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHH----HHhcCC-ccEEEeccCcCC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNF----IASRGV-VPLYISISQRLP 293 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~----aa~rg~-i~~~~~d~~~Lp 293 (392)
.+.+...++...+ ....|||||||+|-++..++.. ...++++|+| ..+.+. +...|. ..+.+.|...-+
T Consensus 119 lD~fY~~i~~~i~--~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId--~~~le~a~~~l~~~g~~~~~~v~D~~~~~ 194 (281)
T 3lcv_B 119 LDEFYRELFRHLP--RPNTLRDLACGLNPLAAPWMGLPAETVYIASDID--ARLVGFVDEALTRLNVPHRTNVADLLEDR 194 (281)
T ss_dssp HHHHHHHHGGGSC--CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESB--HHHHHHHHHHHHHTTCCEEEEECCTTTSC
T ss_pred HHHHHHHHHhccC--CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCC--HHHHHHHHHHHHhcCCCceEEEeeecccC
Confidence 4444555555443 2445699999999999988874 4578885544 455543 333343 345555544433
Q ss_pred CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc---ccc----chHHHHHHHHHHcCCeEE
Q 047630 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC---VGA----QLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 294 f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~---~~~----~l~~~l~~ll~~aGf~~i 362 (392)
+.+.||+|++.-++++..+ +.....+ ++.+.|+|+|+++-..... ... ...+.|.+.+.+.|...-
T Consensus 195 -p~~~~DvaL~lkti~~Le~-q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~ 267 (281)
T 3lcv_B 195 -LDEPADVTLLLKTLPCLET-QQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQ 267 (281)
T ss_dssp -CCSCCSEEEETTCHHHHHH-HSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEE
T ss_pred -CCCCcchHHHHHHHHHhhh-hhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCcee
Confidence 5678999999999988633 3323445 9999999999998776521 111 225556666777786433
No 248
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.52 E-value=1.2e-07 Score=90.02 Aligned_cols=113 Identities=12% Similarity=0.045 Sum_probs=72.3
Q ss_pred cEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----------cCCccEEEeccCcCCCCCCcccEEEEccc
Q 047630 238 RIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----------RGVVPLYISISQRLPFFDNTLDIVHSMHV 307 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----------rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~ 307 (392)
+.|||||||+|..+..+++.+..+++ +|++....+.+.+ ...+.++.+|...+. ++||+|++..
T Consensus 74 ~~VL~iG~G~G~~~~~ll~~~~~v~~--veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~- 147 (262)
T 2cmg_A 74 KEVLIVDGFDLELAHQLFKYDTHIDF--VQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ- 147 (262)
T ss_dssp CEEEEESSCCHHHHHHHTTSSCEEEE--ECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS-
T ss_pred CEEEEEeCCcCHHHHHHHhCCCEEEE--EECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC-
Confidence 45699999999999999887556777 5553444332221 123677788877654 7899999862
Q ss_pred ccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc-ccchHHHHHHHHHHcCCeEEEE
Q 047630 308 LSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV-GAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 308 l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~-~~~l~~~l~~ll~~aGf~~i~w 364 (392)
.++. .+++++.++|||||++++...... .......+.+.+++. |..+..
T Consensus 148 ----~dp~---~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~~~~ 197 (262)
T 2cmg_A 148 ----EPDI---HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGV-FSVAMP 197 (262)
T ss_dssp ----CCCH---HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTT-CSEEEE
T ss_pred ----CChH---HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHh-CCceEE
Confidence 2222 389999999999999988642211 111222344445554 665543
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.50 E-value=5.2e-07 Score=91.36 Aligned_cols=105 Identities=15% Similarity=0.162 Sum_probs=70.8
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHH----HhcCC-ccEEEeccCcCCCC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFI----ASRGV-VPLYISISQRLPFF 295 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~a----a~rg~-i~~~~~d~~~Lpf~ 295 (392)
.+.+++.++.+.++.++ ||+|||+|.++..+++.+..|+++|++ ..+.+.+ ..++. +.++.+|+.++..
T Consensus 278 ~e~l~~~~~~~~~~~~V---LDlgcG~G~~sl~la~~~~~V~gvD~s--~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~- 351 (425)
T 2jjq_A 278 AVNLVRKVSELVEGEKI---LDMYSGVGTFGIYLAKRGFNVKGFDSN--EFAIEMARRNVEINNVDAEFEVASDREVSV- 351 (425)
T ss_dssp HHHHHHHHHHHCCSSEE---EEETCTTTHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHTCCEEEEECCTTTCCC-
T ss_pred HHHHHHHhhccCCCCEE---EEeeccchHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHHcCCcEEEEECChHHcCc-
Confidence 44555655554444455 999999999999999998899995544 3444322 22333 6788999888743
Q ss_pred CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 296 d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+ +||+|++....... . +.+++.+. .|+|||+++++.
T Consensus 352 ~-~fD~Vv~dPPr~g~---~--~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 352 K-GFDTVIVDPPRAGL---H--PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp T-TCSEEEECCCTTCS---C--HHHHHHHH-HHCCSEEEEEES
T ss_pred c-CCCEEEEcCCccch---H--HHHHHHHH-hcCCCcEEEEEC
Confidence 2 89999986543221 1 13555554 599999999874
No 250
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.50 E-value=1.9e-07 Score=90.13 Aligned_cols=75 Identities=8% Similarity=0.133 Sum_probs=57.7
Q ss_pred hhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh----cCCccEEEeccCcCCCCCCcccEEEEc
Q 047630 230 ATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS----RGVVPLYISISQRLPFFDNTLDIVHSM 305 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~----rg~i~~~~~d~~~Lpf~d~sFDlV~s~ 305 (392)
.+.++.+| ||||||+|.++..+++.+..|+++|+|. ...+.+.+ .+.+.++++|+..+++++..||.|+++
T Consensus 47 ~~~~~~~V---LEIG~G~G~lT~~La~~~~~V~aVEid~--~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~Iv~N 121 (295)
T 3gru_A 47 NLTKDDVV---LEIGLGKGILTEELAKNAKKVYVIEIDK--SLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVAN 121 (295)
T ss_dssp TCCTTCEE---EEECCTTSHHHHHHHHHSSEEEEEESCG--GGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSEEEEE
T ss_pred CCCCcCEE---EEECCCchHHHHHHHhcCCEEEEEECCH--HHHHHHHHHhccCCCeEEEECchhhCCcccCCccEEEEe
Confidence 34444555 9999999999999999999999966554 44443332 245789999999999888889999988
Q ss_pred cccc
Q 047630 306 HVLS 309 (392)
Q Consensus 306 ~~l~ 309 (392)
..++
T Consensus 122 lPy~ 125 (295)
T 3gru_A 122 LPYQ 125 (295)
T ss_dssp CCGG
T ss_pred Cccc
Confidence 6653
No 251
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.47 E-value=3.5e-07 Score=86.98 Aligned_cols=140 Identities=11% Similarity=0.042 Sum_probs=82.0
Q ss_pred EEEEEcCCcchHHHHHHHc-CC-EEEEEecCCCchhHHHH-HhcC-CccEEEeccCcCCCCCCcccEEEEccccc---cc
Q 047630 239 IGLDIGGGVATFAVRMMER-NI-TIVTTSMNLNGPFNNFI-ASRG-VVPLYISISQRLPFFDNTLDIVHSMHVLS---NW 311 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-g~-~vvg~~iD~~a~~~~~a-a~rg-~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~---~~ 311 (392)
+|||+|||+|.++..++++ ++ .+.++++..+-+..... ...+ .+..+..+++...+.++.||+|+|..+.+ ++
T Consensus 77 ~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~ 156 (277)
T 3evf_A 77 RVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGESSSSSV 156 (277)
T ss_dssp EEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCSCHH
T ss_pred EEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccCcCchH
Confidence 4599999999999988875 43 34553333211100000 0011 12334555555667788999999987664 22
Q ss_pred CCchhHHHHHHHHHHcccCC-cEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEeeccCCCCcccceeeEE
Q 047630 312 IPTTLLHFLMFDIYRVLRPG-GLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGRKLDRGPELREMYLSA 383 (392)
Q Consensus 312 ~~~~~l~~~L~el~RvLKPG-G~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~~~~~e~ylsa 383 (392)
.+......+|..+.++|||| |.|++..|..-.++..+ +.+.+++. |+.+....- . .-....|.|+.+
T Consensus 157 ~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~-l~~~lk~~-F~~V~~~KP-a--SR~~S~E~Y~V~ 224 (277)
T 3evf_A 157 TEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLE-KLELLQRR-FGGTVIRNP-L--SRNSTHEMYYVS 224 (277)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHH-HHHHHHHH-HCCEEECCT-T--SCTTCCCEEEES
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHH-HHHHHHHh-cCCEEEEeC-C--CCCCCCceEEEE
Confidence 23323234678889999999 99999655522344433 44555554 777766533 1 113456788743
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.46 E-value=1.9e-07 Score=87.25 Aligned_cols=83 Identities=10% Similarity=0.189 Sum_probs=54.4
Q ss_pred HHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----CCccEEEeccCcCCCCC-C
Q 047630 223 FSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----GVVPLYISISQRLPFFD-N 297 (392)
Q Consensus 223 ~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g~i~~~~~d~~~Lpf~d-~ 297 (392)
.+++.++.......-..|||||||+|.++..+++++..+++ +|++..+.+.+.++ +.+.++.+|+..+++++ .
T Consensus 17 ~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~--vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~ 94 (244)
T 1qam_A 17 HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTA--IEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQ 94 (244)
T ss_dssp HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEE--ECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSC
T ss_pred HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEE--EECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCC
Confidence 34455544322112233499999999999999999989988 55544555544432 34788999999998874 4
Q ss_pred cccEEEEcccc
Q 047630 298 TLDIVHSMHVL 308 (392)
Q Consensus 298 sFDlV~s~~~l 308 (392)
.| .|+++..+
T Consensus 95 ~~-~vv~nlPy 104 (244)
T 1qam_A 95 SY-KIFGNIPY 104 (244)
T ss_dssp CC-EEEEECCG
T ss_pred Ce-EEEEeCCc
Confidence 55 45555443
No 253
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.45 E-value=6.2e-07 Score=84.10 Aligned_cols=108 Identities=12% Similarity=0.058 Sum_probs=73.2
Q ss_pred HHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHH----hcCC-ccEEEeccCcCCCCC
Q 047630 222 DFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIA----SRGV-VPLYISISQRLPFFD 296 (392)
Q Consensus 222 ~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa----~rg~-i~~~~~d~~~Lpf~d 296 (392)
+.+...++...+ ...|||||||+|.++..+. .+..++++|+| +.+.+.+. ..+. ..+.+.|...-+.+.
T Consensus 94 d~fY~~i~~~~~---p~~VLDlGCG~gpLal~~~-~~~~y~a~DId--~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~ 167 (253)
T 3frh_A 94 DTLYDFIFSAET---PRRVLDIACGLNPLALYER-GIASVWGCDIH--QGLGDVITPFAREKDWDFTFALQDVLCAPPAE 167 (253)
T ss_dssp HHHHHHHTSSCC---CSEEEEETCTTTHHHHHHT-TCSEEEEEESB--HHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC
T ss_pred HHHHHHHhcCCC---CCeEEEecCCccHHHHHhc-cCCeEEEEeCC--HHHHHHHHHHHHhcCCCceEEEeecccCCCCC
Confidence 334444554422 3455999999999999888 77788886655 45554322 2342 456677877766544
Q ss_pred CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+||+|++.-++|++.+.+. ....++.+.|+++|+++-..
T Consensus 168 -~~DvvLllk~lh~LE~q~~--~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 168 -AGDLALIFKLLPLLEREQA--GSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp -BCSEEEEESCHHHHHHHST--THHHHHHHHCBCSEEEEEEE
T ss_pred -CcchHHHHHHHHHhhhhch--hhHHHHHHHhcCCCEEEEcC
Confidence 8999999988877533222 23348888999999987776
No 254
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.36 E-value=6.8e-06 Score=81.79 Aligned_cols=52 Identities=21% Similarity=0.136 Sum_probs=40.1
Q ss_pred cCcCCCCCCcccEEEEcccccccCCch-----------------------------------hHHHHHHHHHHcccCCcE
Q 047630 289 SQRLPFFDNTLDIVHSMHVLSNWIPTT-----------------------------------LLHFLMFDIYRVLRPGGL 333 (392)
Q Consensus 289 ~~~Lpf~d~sFDlV~s~~~l~~~~~~~-----------------------------------~l~~~L~el~RvLKPGG~ 333 (392)
...-.|++++||+|+++.++|.+.+.. ++..+|+..+|.|+|||+
T Consensus 141 Fy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~ 220 (374)
T 3b5i_A 141 FYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGA 220 (374)
T ss_dssp TTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred hhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 333457899999999999996543211 456679999999999999
Q ss_pred EEEEeec
Q 047630 334 FWLDHFF 340 (392)
Q Consensus 334 lii~~~~ 340 (392)
+++....
T Consensus 221 mvl~~~g 227 (374)
T 3b5i_A 221 MFLVCLG 227 (374)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9888653
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.35 E-value=1.1e-06 Score=89.18 Aligned_cols=109 Identities=10% Similarity=0.078 Sum_probs=71.0
Q ss_pred HHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---------------CCEEEEEecCCCchhHHH----HHhcC----
Q 047630 224 SIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---------------NITIVTTSMNLNGPFNNF----IASRG---- 280 (392)
Q Consensus 224 lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---------------g~~vvg~~iD~~a~~~~~----aa~rg---- 280 (392)
++.+++...++.+| ||.|||+|.++..+++. +..++|+|+|. ..... +..+|
T Consensus 162 ~mv~~l~~~~~~~V---lDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~--~~~~lA~~nl~l~g~~~~ 236 (445)
T 2okc_A 162 AMVDCINPQMGETV---CDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTP--LVVTLASMNLYLHGIGTD 236 (445)
T ss_dssp HHHHHHCCCTTCCE---EETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCH--HHHHHHHHHHHHTTCCSS
T ss_pred HHHHHhCCCCCCEE---eccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCH--HHHHHHHHHHHHhCCCcC
Confidence 33334433333445 99999999998887763 35688866543 33322 22233
Q ss_pred CccEEEeccCcCCCCCCcccEEEEcccccccCCch--------------hHHHHHHHHHHcccCCcEEEEEe
Q 047630 281 VVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTT--------------LLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 281 ~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~--------------~l~~~L~el~RvLKPGG~lii~~ 338 (392)
.+.+.++|....+.. ..||+|+++..+....... .-..+++.+.+.|||||++.+..
T Consensus 237 ~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 237 RSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp CCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 357888887776643 4899999997665422111 11368999999999999997765
No 256
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.29 E-value=2.4e-06 Score=84.56 Aligned_cols=126 Identities=10% Similarity=0.058 Sum_probs=77.4
Q ss_pred cccEEEEEcCCcchHHHHHHHcCC-EEEEEecCCCchhHHHHHhc--------------CCccEEEeccCcCCC----CC
Q 047630 236 TIRIGLDIGGGVATFAVRMMERNI-TIVTTSMNLNGPFNNFIASR--------------GVVPLYISISQRLPF----FD 296 (392)
Q Consensus 236 ~ir~VLDIGCGtG~~a~~La~~g~-~vvg~~iD~~a~~~~~aa~r--------------g~i~~~~~d~~~Lpf----~d 296 (392)
..+.|||||||+|.++..+++.+. .++++++| ....+.+.+. ..++++++|+..+-- .+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID--~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEID--QMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESC--HHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 345669999999999999988654 57775544 4444433322 025677788665321 35
Q ss_pred CcccEEEEcccccccC-Cch--hHHHHHHHH----HHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEE
Q 047630 297 NTLDIVHSMHVLSNWI-PTT--LLHFLMFDI----YRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~-~~~--~l~~~L~el----~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
++||+|+....-..+. .+. .-..+++++ .++|+|||++++..-.....+....+++.+++. |..+.+
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~-F~~v~~ 339 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRL-YCPVEF 339 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTS-SSCEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHh-CCceEE
Confidence 7899999864320111 110 113455555 999999999988864433344445455555554 777766
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.27 E-value=6.6e-06 Score=81.41 Aligned_cols=132 Identities=11% Similarity=-0.001 Sum_probs=80.1
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHH----HHHhcC--CccEEEeccCcCC-
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNN----FIASRG--VVPLYISISQRLP- 293 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~----~aa~rg--~i~~~~~d~~~Lp- 293 (392)
.+.+++.+++...... ..|||+|||+|.++..+++....|+++| ++....+ .+..++ .+.++.+|+.++.
T Consensus 199 ~~~l~~~~~~~~~~~~-~~vLDl~cG~G~~~l~la~~~~~V~gvd--~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~ 275 (369)
T 3bt7_A 199 NIQMLEWALDVTKGSK-GDLLELYCGNGNFSLALARNFDRVLATE--IAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQ 275 (369)
T ss_dssp HHHHHHHHHHHTTTCC-SEEEEESCTTSHHHHHHGGGSSEEEEEC--CCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHH
T ss_pred HHHHHHHHHHHhhcCC-CEEEEccCCCCHHHHHHHhcCCEEEEEE--CCHHHHHHHHHHHHHcCCCceEEEECCHHHHHH
Confidence 3556666655432211 2359999999999999999878899855 5344443 233334 3678888876541
Q ss_pred -CCC--------------CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcC
Q 047630 294 -FFD--------------NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVG 358 (392)
Q Consensus 294 -f~d--------------~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aG 358 (392)
+.. .+||+|+....... +..++.+.|+++|.+++... ....+...+..+.+ |
T Consensus 276 ~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g---------~~~~~~~~l~~~g~ivyvsc--~p~t~ard~~~l~~--~ 342 (369)
T 3bt7_A 276 AMNGVREFNRLQGIDLKSYQCETIFVDPPRSG---------LDSETEKMVQAYPRILYISC--NPETLCKNLETLSQ--T 342 (369)
T ss_dssp HHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC---------CCHHHHHHHTTSSEEEEEES--CHHHHHHHHHHHHH--H
T ss_pred HHhhccccccccccccccCCCCEEEECcCccc---------cHHHHHHHHhCCCEEEEEEC--CHHHHHHHHHHHhh--C
Confidence 111 37999987533211 34567777889998877653 22333344444433 5
Q ss_pred CeEEEEEEee
Q 047630 359 FNKLKWVVGR 368 (392)
Q Consensus 359 f~~i~w~~~~ 368 (392)
|+..+.....
T Consensus 343 y~~~~~~~~D 352 (369)
T 3bt7_A 343 HKVERLALFD 352 (369)
T ss_dssp EEEEEEEEEC
T ss_pred cEEEEEEeec
Confidence 7776666553
No 258
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.26 E-value=1.5e-06 Score=82.81 Aligned_cols=75 Identities=8% Similarity=0.116 Sum_probs=55.9
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc---CCccEEEeccCcCCCCCC-cccEEEE
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR---GVVPLYISISQRLPFFDN-TLDIVHS 304 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r---g~i~~~~~d~~~Lpf~d~-sFDlV~s 304 (392)
+.+.++ .| ||||||+|.++..+++.+..|+++|+| ..+.+.+.++ +.+.++++|+..+++++. .+|.|++
T Consensus 43 ~~~~~~-~V---LEIG~G~G~lt~~L~~~~~~V~avEid--~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv~ 116 (271)
T 3fut_A 43 ARPFTG-PV---FEVGPGLGALTRALLEAGAEVTAIEKD--LRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVA 116 (271)
T ss_dssp HCCCCS-CE---EEECCTTSHHHHHHHHTTCCEEEEESC--GGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEE
T ss_pred cCCCCC-eE---EEEeCchHHHHHHHHHcCCEEEEEECC--HHHHHHHHHhcCCCCEEEEECChhhCChhhccCccEEEe
Confidence 334444 55 999999999999999999999996655 4555544332 347899999999887653 6899998
Q ss_pred ccccc
Q 047630 305 MHVLS 309 (392)
Q Consensus 305 ~~~l~ 309 (392)
+..++
T Consensus 117 NlPy~ 121 (271)
T 3fut_A 117 NLPYH 121 (271)
T ss_dssp EECSS
T ss_pred cCccc
Confidence 87653
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.24 E-value=1.3e-06 Score=82.46 Aligned_cols=74 Identities=14% Similarity=0.272 Sum_probs=53.2
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----CCccEEEeccCcCCCCC----Cccc
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----GVVPLYISISQRLPFFD----NTLD 300 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g~i~~~~~d~~~Lpf~d----~sFD 300 (392)
+.+.++.+| ||||||+|.++..+++.+..++++|+| ..+.+.+.++ +.+.++++|+..+++++ +.||
T Consensus 25 ~~~~~~~~V---LEIG~G~G~lt~~La~~~~~V~avEid--~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~ 99 (255)
T 3tqs_A 25 IHPQKTDTL---VEIGPGRGALTDYLLTECDNLALVEID--RDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLR 99 (255)
T ss_dssp HCCCTTCEE---EEECCTTTTTHHHHTTTSSEEEEEECC--HHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCEE
T ss_pred cCCCCcCEE---EEEcccccHHHHHHHHhCCEEEEEECC--HHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCeE
Confidence 344455555 999999999999999999899995544 4555443332 35789999999987743 4688
Q ss_pred EEEEcccc
Q 047630 301 IVHSMHVL 308 (392)
Q Consensus 301 lV~s~~~l 308 (392)
|+++..+
T Consensus 100 -vv~NlPY 106 (255)
T 3tqs_A 100 -VVGNLPY 106 (255)
T ss_dssp -EEEECCH
T ss_pred -EEecCCc
Confidence 6666544
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.20 E-value=3.2e-06 Score=84.38 Aligned_cols=96 Identities=8% Similarity=0.026 Sum_probs=68.0
Q ss_pred EEEEcCCcchHHHHHHHcC----------------------------------------CEEEEEecCCCchhHH----H
Q 047630 240 GLDIGGGVATFAVRMMERN----------------------------------------ITIVTTSMNLNGPFNN----F 275 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g----------------------------------------~~vvg~~iD~~a~~~~----~ 275 (392)
|||.+||+|.++..++..+ ..++|+|+|. ...+ .
T Consensus 199 vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~--~ai~~Ar~N 276 (385)
T 3ldu_A 199 LVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDE--ESIDIAREN 276 (385)
T ss_dssp EEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCH--HHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCH--HHHHHHHHH
Confidence 4999999999998887642 4588866543 3333 2
Q ss_pred HHhcC---CccEEEeccCcCCCCCCcccEEEEcccccc-cCCchhHHHHHHHHHHcccC--CcEEEEEe
Q 047630 276 IASRG---VVPLYISISQRLPFFDNTLDIVHSMHVLSN-WIPTTLLHFLMFDIYRVLRP--GGLFWLDH 338 (392)
Q Consensus 276 aa~rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~-~~~~~~l~~~L~el~RvLKP--GG~lii~~ 338 (392)
+...| .+.+.++|+.+++.+ .+||+|+++..+.. +.+...+..+.+++.++||+ ||.+++..
T Consensus 277 a~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 277 AEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred HHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 33334 378899999988764 58999999876542 22335667788888888887 88887664
No 261
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.19 E-value=3.7e-06 Score=84.21 Aligned_cols=96 Identities=8% Similarity=0.015 Sum_probs=66.6
Q ss_pred EEEEcCCcchHHHHHHHcC----------------------------------------CEEEEEecCCCchhHH----H
Q 047630 240 GLDIGGGVATFAVRMMERN----------------------------------------ITIVTTSMNLNGPFNN----F 275 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g----------------------------------------~~vvg~~iD~~a~~~~----~ 275 (392)
|||.+||+|.++...+..+ ..++|+|+|. .+.+ .
T Consensus 205 vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~--~al~~Ar~N 282 (393)
T 3k0b_A 205 FYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDA--RLIEIAKQN 282 (393)
T ss_dssp EEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCH--HHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCH--HHHHHHHHH
Confidence 4999999999988877632 3488855543 4443 2
Q ss_pred HHhcC---CccEEEeccCcCCCCCCcccEEEEcccccc-cCCchhHHHHHHHHHHcccC--CcEEEEEe
Q 047630 276 IASRG---VVPLYISISQRLPFFDNTLDIVHSMHVLSN-WIPTTLLHFLMFDIYRVLRP--GGLFWLDH 338 (392)
Q Consensus 276 aa~rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~-~~~~~~l~~~L~el~RvLKP--GG~lii~~ 338 (392)
+...| .+.+.++|+.+++.+ .+||+|+++..+.. ..+...+..+.+++.++||+ ||.+++..
T Consensus 283 a~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 283 AVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 33334 378999999998865 48999999955432 22334566777878788877 88887764
No 262
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.19 E-value=4e-05 Score=75.91 Aligned_cols=143 Identities=10% Similarity=0.065 Sum_probs=90.9
Q ss_pred CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEccccccc
Q 047630 232 KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~ 311 (392)
.++..+ ||+||.+|.++..+++++..|++ +|. .++.......+.+.++.+|...+....+.||+|+|-.+...
T Consensus 210 ~~G~~v---lDLGAaPGGWT~~l~~rg~~V~a--VD~-~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~p- 282 (375)
T 4auk_A 210 ANGMWA---VDLGACPGGWTYQLVKRNMWVYS--VDN-GPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEKP- 282 (375)
T ss_dssp CTTCEE---EEETCTTCHHHHHHHHTTCEEEE--ECS-SCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSCH-
T ss_pred CCCCEE---EEeCcCCCHHHHHHHHCCCEEEE--EEh-hhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCCh-
Confidence 455555 99999999999999999999999 555 45555555556688999998888777788999999776532
Q ss_pred CCchhHHHHHHHHHHcccCCcEEEEEeeccc--ccch---HHHHHHHHHHcCCeEEEEEEeeccCCCCcccceeeEEEEE
Q 047630 312 IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV--GAQL---EDVYVPLIESVGFNKLKWVVGRKLDRGPELREMYLSALLE 386 (392)
Q Consensus 312 ~~~~~l~~~L~el~RvLKPGG~lii~~~~~~--~~~l---~~~l~~ll~~aGf~~i~w~~~~k~d~~~~~~e~ylsai~~ 386 (392)
.....++..+...+..++.++...+.-. .+.+ ...+...++..||...- . ... ...++.|+ ++.++
T Consensus 283 ---~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~~l-~-akh--L~hdReEi--TV~~r 353 (375)
T 4auk_A 283 ---AKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQI-Q-ARQ--LYHDREEV--TVHVR 353 (375)
T ss_dssp ---HHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCCEEE-E-EEC--CTTCSSEE--EEEEE
T ss_pred ---HHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcchhh-e-ehh--hccCCcEE--EEEEE
Confidence 3433444444444444455544333211 1111 34466778888886421 1 111 11234454 67888
Q ss_pred cCCC
Q 047630 387 KPFL 390 (392)
Q Consensus 387 Kp~~ 390 (392)
||..
T Consensus 354 k~~a 357 (375)
T 4auk_A 354 RIWA 357 (375)
T ss_dssp ECCC
T ss_pred echh
Confidence 8864
No 263
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.18 E-value=3.2e-05 Score=77.18 Aligned_cols=130 Identities=16% Similarity=0.083 Sum_probs=79.7
Q ss_pred EEEEEcCCcchHHHHHHHc-----------------CCEEEEEecCCC-chhHH----------HH-HhcCC---ccEEE
Q 047630 239 IGLDIGGGVATFAVRMMER-----------------NITIVTTSMNLN-GPFNN----------FI-ASRGV---VPLYI 286 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-----------------g~~vvg~~iD~~-a~~~~----------~a-a~rg~---i~~~~ 286 (392)
.|+|+||++|..+..+.+. .+.+..+--|+- -++.. .. ...|. .-|+.
T Consensus 55 ~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~~ 134 (384)
T 2efj_A 55 KVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLIG 134 (384)
T ss_dssp EEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEEE
T ss_pred EEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEEE
Confidence 4599999999988766552 123333234441 23321 11 12221 23444
Q ss_pred ec---cCcCCCCCCcccEEEEcccccccCCch-h-----------------------------------HHHHHHHHHHc
Q 047630 287 SI---SQRLPFFDNTLDIVHSMHVLSNWIPTT-L-----------------------------------LHFLMFDIYRV 327 (392)
Q Consensus 287 ~d---~~~Lpf~d~sFDlV~s~~~l~~~~~~~-~-----------------------------------l~~~L~el~Rv 327 (392)
+. ...-.|++++||+|+++.++|...+.. . +..+|+-.+|.
T Consensus 135 gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~e 214 (384)
T 2efj_A 135 AMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEE 214 (384)
T ss_dssp ECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 334578999999999999996543221 1 12236677999
Q ss_pred ccCCcEEEEEeeccccc--c------h-----------------------------HHHHHHHHHHcC-CeEEEEEEee
Q 047630 328 LRPGGLFWLDHFFCVGA--Q------L-----------------------------EDVYVPLIESVG-FNKLKWVVGR 368 (392)
Q Consensus 328 LKPGG~lii~~~~~~~~--~------l-----------------------------~~~l~~ll~~aG-f~~i~w~~~~ 368 (392)
|+|||++++........ . + .++++.++++.| |++.+.+...
T Consensus 215 L~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~ 293 (384)
T 2efj_A 215 LISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFN 293 (384)
T ss_dssp EEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEE
T ss_pred hccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEe
Confidence 99999999987644332 1 0 667888899874 7777766443
No 264
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.13 E-value=7.6e-06 Score=81.72 Aligned_cols=97 Identities=13% Similarity=0.047 Sum_probs=69.0
Q ss_pred EEEEcCCcchHHHHHHHcC----------------------------------------CEEEEEecCCCchhHH----H
Q 047630 240 GLDIGGGVATFAVRMMERN----------------------------------------ITIVTTSMNLNGPFNN----F 275 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g----------------------------------------~~vvg~~iD~~a~~~~----~ 275 (392)
+||.+||+|.++...+..+ ..++|+|+|. .+.+ +
T Consensus 198 llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~--~al~~Ar~N 275 (384)
T 3ldg_A 198 FVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDG--RMVEIARKN 275 (384)
T ss_dssp EEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCH--HHHHHHHHH
T ss_pred EEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCH--HHHHHHHHH
Confidence 4999999999988877632 3488866543 4433 2
Q ss_pred HHhcC---CccEEEeccCcCCCCCCcccEEEEcccccc-cCCchhHHHHHHHHHHcccC--CcEEEEEee
Q 047630 276 IASRG---VVPLYISISQRLPFFDNTLDIVHSMHVLSN-WIPTTLLHFLMFDIYRVLRP--GGLFWLDHF 339 (392)
Q Consensus 276 aa~rg---~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~-~~~~~~l~~~L~el~RvLKP--GG~lii~~~ 339 (392)
+...| .+.+.++|+.+++.+ .+||+|+++-.+.. +.+...++.+.+++.+.||+ ||.+++...
T Consensus 276 a~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 276 AREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 33334 377899999998865 48999999965532 33446777888888888887 888877643
No 265
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.10 E-value=2e-05 Score=76.42 Aligned_cols=136 Identities=10% Similarity=-0.018 Sum_probs=83.2
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc---CCEEEEEecCCCchhHH----HHHhcC--CccEEEeccCc
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER---NITIVTTSMNLNGPFNN----FIASRG--VVPLYISISQR 291 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~---g~~vvg~~iD~~a~~~~----~aa~rg--~i~~~~~d~~~ 291 (392)
...++..++...++.+| ||+|||+|..+..+++. ...|+++|++ ....+ .+.+.| .+.++.+|+..
T Consensus 90 ~s~l~~~~l~~~~g~~V---LDlcaG~G~kt~~la~~~~~~g~V~a~D~~--~~~l~~~~~n~~r~g~~~v~~~~~D~~~ 164 (309)
T 2b9e_A 90 ASCLPAMLLDPPPGSHV---IDACAAPGNKTSHLAALLKNQGKIFAFDLD--AKRLASMATLLARAGVSCCELAEEDFLA 164 (309)
T ss_dssp GGGHHHHHHCCCTTCEE---EESSCTTCHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHTTCCSEEEEECCGGG
T ss_pred HHHHHHHHhCCCCCCEE---EEeCCChhHHHHHHHHHhCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCeEEEEeCChHh
Confidence 34455556666666666 99999999999999883 3578885544 44443 233334 36788888877
Q ss_pred CCCCC---CcccEEEEcc------cccc-----cC---Cchh-------HHHHHHHHHHcccCCcEEEEEeecccccchH
Q 047630 292 LPFFD---NTLDIVHSMH------VLSN-----WI---PTTL-------LHFLMFDIYRVLRPGGLFWLDHFFCVGAQLE 347 (392)
Q Consensus 292 Lpf~d---~sFDlV~s~~------~l~~-----~~---~~~~-------l~~~L~el~RvLKPGG~lii~~~~~~~~~l~ 347 (392)
++... ++||.|++.- .+.. |. .+++ ..++|..+.+.|+ ||++++....-..++..
T Consensus 165 ~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene 243 (309)
T 2b9e_A 165 VSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENE 243 (309)
T ss_dssp SCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTH
T ss_pred cCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhH
Confidence 75432 5799999731 1111 00 0111 1356788888887 99998876543334444
Q ss_pred HHHHHHHHHc-C-CeEE
Q 047630 348 DVYVPLIESV-G-FNKL 362 (392)
Q Consensus 348 ~~l~~ll~~a-G-f~~i 362 (392)
+.+...+++. + |+.+
T Consensus 244 ~~v~~~l~~~~~~~~~~ 260 (309)
T 2b9e_A 244 DVVRDALQQNPGAFRLA 260 (309)
T ss_dssp HHHHHHHTTSTTTEEEC
T ss_pred HHHHHHHHhCCCcEEEe
Confidence 5566677665 3 5544
No 266
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.97 E-value=5.1e-05 Score=75.05 Aligned_cols=99 Identities=19% Similarity=0.098 Sum_probs=61.9
Q ss_pred EEEEcCCcchHHHHHHHc----------------C--CEEEEEecCCCchhHHHHHhcC------CccEEEe---ccCcC
Q 047630 240 GLDIGGGVATFAVRMMER----------------N--ITIVTTSMNLNGPFNNFIASRG------VVPLYIS---ISQRL 292 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~----------------g--~~vvg~~iD~~a~~~~~aa~rg------~i~~~~~---d~~~L 292 (392)
|+|+||++|..+..+.+. . .+|...|+-. .++......-. ..-++.+ +...-
T Consensus 55 IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~-NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~r 133 (359)
T 1m6e_X 55 IADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPG-NDFNAIFRSLPIENDVDGVCFINGVPGSFYGR 133 (359)
T ss_dssp CEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTT-SCHHHHHTTTTTSCSCTTCEEEEEEESCSSSC
T ss_pred EEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCc-hHHHHHHHhcchhcccCCCEEEEecchhhhhc
Confidence 499999999865544332 2 3455544322 33333211110 1123333 34456
Q ss_pred CCCCCcccEEEEcccccccCCc------------------------------hhHHHHHHHHHHcccCCcEEEEEee
Q 047630 293 PFFDNTLDIVHSMHVLSNWIPT------------------------------TLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 293 pf~d~sFDlV~s~~~l~~~~~~------------------------------~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
.|+++++|+|+++.++|..... .++..+|+..++.|+|||++++...
T Consensus 134 lfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 134 LFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp CSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred cCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 7899999999999999654321 1345568889999999999988865
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.97 E-value=6.3e-06 Score=77.84 Aligned_cols=82 Identities=12% Similarity=0.078 Sum_probs=54.3
Q ss_pred HHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCc-------hhHHHHHhc-------CCccEEEecc
Q 047630 224 SIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNG-------PFNNFIASR-------GVVPLYISIS 289 (392)
Q Consensus 224 lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a-------~~~~~aa~r-------g~i~~~~~d~ 289 (392)
++.+.+...++.++ ||+|||+|.++..+++.+..|+++| ++. ...+.+.++ +.+.++.+|.
T Consensus 74 ~l~~a~~~~~~~~V---LDlgcG~G~~a~~lA~~g~~V~~vD--~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 74 LIAKAVNHTAHPTV---WDATAGLGRDSFVLASLGLTVTAFE--QHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp HHHHHTTGGGCCCE---EETTCTTCHHHHHHHHTTCCEEEEE--CCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred HHHHHhCcCCcCeE---EEeeCccCHHHHHHHHhCCEEEEEE--CChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 34444444344555 9999999999999999988999855 534 232222221 2378899987
Q ss_pred CcC-C-CCC--CcccEEEEcccccc
Q 047630 290 QRL-P-FFD--NTLDIVHSMHVLSN 310 (392)
Q Consensus 290 ~~L-p-f~d--~sFDlV~s~~~l~~ 310 (392)
..+ + +++ ++||+|++...+.+
T Consensus 149 ~~~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 149 AEQMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCC--
T ss_pred HHHHHhhhccCCCccEEEECCCCCC
Confidence 764 3 444 78999999876655
No 268
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.96 E-value=4.8e-05 Score=79.21 Aligned_cols=111 Identities=13% Similarity=0.056 Sum_probs=69.6
Q ss_pred HHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc--------------------CCEEEEEecCCCchhHHH----HHh
Q 047630 223 FSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER--------------------NITIVTTSMNLNGPFNNF----IAS 278 (392)
Q Consensus 223 ~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~--------------------g~~vvg~~iD~~a~~~~~----aa~ 278 (392)
.++.+++...++.+| ||.|||+|.++..+++. ...++|+++|. ..... +..
T Consensus 159 ~~mv~~l~p~~~~~V---lDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~--~~~~lA~~nl~l 233 (541)
T 2ar0_A 159 KTIIHLLKPQPREVV---QDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVP--GTRRLALMNCLL 233 (541)
T ss_dssp HHHHHHHCCCTTCCE---EETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCH--HHHHHHHHHHHT
T ss_pred HHHHHHhccCCCCeE---ecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCH--HHHHHHHHHHHH
Confidence 333344433334445 99999999998777652 13688866543 33322 222
Q ss_pred cCC-------ccEEEeccCcCC-CCCCcccEEEEcccccccCC-----------chhHHHHHHHHHHcccCCcEEEEEe
Q 047630 279 RGV-------VPLYISISQRLP-FFDNTLDIVHSMHVLSNWIP-----------TTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 279 rg~-------i~~~~~d~~~Lp-f~d~sFDlV~s~~~l~~~~~-----------~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
++. +.+.++|....+ ...+.||+|+++..+..... ...-..++..+.+.|||||++.+..
T Consensus 234 ~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 234 HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 332 467888865543 34578999999866643211 1111268999999999999997765
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.94 E-value=3e-05 Score=72.78 Aligned_cols=67 Identities=12% Similarity=0.174 Sum_probs=47.2
Q ss_pred EEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHHHHHhc--CCccEEEeccCcCCCCCCc-ccEEEEcccc
Q 047630 240 GLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNFIASR--GVVPLYISISQRLPFFDNT-LDIVHSMHVL 308 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~~aa~r--g~i~~~~~d~~~Lpf~d~s-FDlV~s~~~l 308 (392)
|||||||+|.++..+++.+ ..+++ +|++..+.+.+.++ ..+.++++|+..+++++.. ...|+++..+
T Consensus 35 VLDiG~G~G~lt~~L~~~~~~~v~a--vEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~vv~NlPy 105 (249)
T 3ftd_A 35 VVEVGGGTGNLTKVLLQHPLKKLYV--IELDREMVENLKSIGDERLEVINEDASKFPFCSLGKELKVVGNLPY 105 (249)
T ss_dssp EEEEESCHHHHHHHHTTSCCSEEEE--ECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSEEEEEECCT
T ss_pred EEEEcCchHHHHHHHHHcCCCeEEE--EECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCcEEEEECch
Confidence 4999999999999999985 78988 55544555555544 2367899999998876521 1255555443
No 270
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.94 E-value=1e-05 Score=77.01 Aligned_cols=138 Identities=11% Similarity=0.019 Sum_probs=78.3
Q ss_pred EEEEEcCCcchHHHHHHHc-CC-EEEEEecCCCchhHHHHH---hcC-CccEEEeccCcCCCCCCcccEEEEcccccc--
Q 047630 239 IGLDIGGGVATFAVRMMER-NI-TIVTTSMNLNGPFNNFIA---SRG-VVPLYISISQRLPFFDNTLDIVHSMHVLSN-- 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-g~-~vvg~~iD~~a~~~~~aa---~rg-~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~-- 310 (392)
.|||+|||.|.|+...++. ++ .++|+++.. +...... ..+ .+.....+..-..+..+.+|+|+|..+...
T Consensus 93 ~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~--d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmApnsG~ 170 (282)
T 3gcz_A 93 IVVDLGCGRGGWSYYAASLKNVKKVMAFTLGV--QGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGESSPS 170 (282)
T ss_dssp EEEEETCTTCHHHHHHHTSTTEEEEEEECCCC--TTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCCCCSC
T ss_pred EEEEeCCCCCHHHHHHHHhcCCCeeeeEEecc--CccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCccCCCC
Confidence 3599999999999988864 43 355644432 2111000 011 112223222333456788999999877751
Q ss_pred -cCCchhHHHHHHHHHHcccCC--cEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEeeccCCCCcccceeeEE
Q 047630 311 -WIPTTLLHFLMFDIYRVLRPG--GLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGRKLDRGPELREMYLSA 383 (392)
Q Consensus 311 -~~~~~~l~~~L~el~RvLKPG--G~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~~~~~e~ylsa 383 (392)
+.+......+|.-+.++|||| |.|++-.|..-.++..+ +.+.+++. |+.+.+..- . .-....|.|+.+
T Consensus 171 ~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~-l~~~lk~~-F~~V~~~KP-a--SR~~S~E~Y~V~ 241 (282)
T 3gcz_A 171 IAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIME-ELSRLQLK-HGGGLVRVP-L--SRNSTHEMYWVS 241 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHH-HHHHHHHH-HCCEEECCT-T--SCTTCCCEEEET
T ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHH-HHHHHHHh-cCCEEEEcC-C--CcccCcceeEEE
Confidence 112222224577778999999 99999766532344433 44455554 777766533 1 113456787743
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.91 E-value=7.8e-06 Score=78.14 Aligned_cols=75 Identities=11% Similarity=0.140 Sum_probs=51.4
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcCCE----EEEEecCCCchhHHHHHhc--CCccEEEeccCcCCCCCC-----
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERNIT----IVTTSMNLNGPFNNFIASR--GVVPLYISISQRLPFFDN----- 297 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~----vvg~~iD~~a~~~~~aa~r--g~i~~~~~d~~~Lpf~d~----- 297 (392)
+.+.++.+| ||||||+|.++..|++.+.. ++++|+| ..+.+.+.++ ..+.++++|+..+++++-
T Consensus 38 ~~~~~~~~V---LEIG~G~G~lt~~La~~~~~~~~~V~avDid--~~~l~~a~~~~~~~v~~i~~D~~~~~~~~~~~~~~ 112 (279)
T 3uzu_A 38 IRPERGERM---VEIGPGLGALTGPVIARLATPGSPLHAVELD--RDLIGRLEQRFGELLELHAGDALTFDFGSIARPGD 112 (279)
T ss_dssp HCCCTTCEE---EEECCTTSTTHHHHHHHHCBTTBCEEEEECC--HHHHHHHHHHHGGGEEEEESCGGGCCGGGGSCSSS
T ss_pred cCCCCcCEE---EEEccccHHHHHHHHHhCCCcCCeEEEEECC--HHHHHHHHHhcCCCcEEEECChhcCChhHhccccc
Confidence 334455555 99999999999999998777 9885544 4555544443 347899999999887542
Q ss_pred -cccEEEEcccc
Q 047630 298 -TLDIVHSMHVL 308 (392)
Q Consensus 298 -sFDlV~s~~~l 308 (392)
..+.|+++..+
T Consensus 113 ~~~~~vv~NlPY 124 (279)
T 3uzu_A 113 EPSLRIIGNLPY 124 (279)
T ss_dssp SCCEEEEEECCH
T ss_pred CCceEEEEccCc
Confidence 22356665543
No 272
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.86 E-value=1.2e-05 Score=80.11 Aligned_cols=94 Identities=10% Similarity=0.073 Sum_probs=63.9
Q ss_pred CCCcccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHH----HHHhc---------------CC--ccEEEecc
Q 047630 233 KPGTIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNN----FIASR---------------GV--VPLYISIS 289 (392)
Q Consensus 233 ~~~~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~----~aa~r---------------g~--i~~~~~d~ 289 (392)
++.+| ||+|||+|.++..++++ +..|+++|+|. ...+ ++... +. +.++.+|+
T Consensus 47 ~~~~V---LDl~aGtG~~~l~~a~~~~~~~V~avDi~~--~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da 121 (378)
T 2dul_A 47 NPKIV---LDALSATGIRGIRFALETPAEEVWLNDISE--DAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDA 121 (378)
T ss_dssp CCSEE---EESSCTTSHHHHHHHHHSSCSEEEEEESCH--HHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCH
T ss_pred CCCEE---EECCCchhHHHHHHHHhCCCCeEEEEECCH--HHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcH
Confidence 44555 99999999999999985 35788866554 3332 33333 42 56777886
Q ss_pred CcCCC-CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 290 QRLPF-FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 290 ~~Lpf-~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
..+.. ..+.||+|+..- .. . ...++..+.+.||+||+++++.
T Consensus 122 ~~~~~~~~~~fD~I~lDP-~~---~---~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 122 NRLMAERHRYFHFIDLDP-FG---S---PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHHSTTCEEEEEECC-SS---C---CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhccCCCCEEEeCC-CC---C---HHHHHHHHHHhcCCCCEEEEEe
Confidence 55421 245799999542 21 1 1358899999999999988764
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.85 E-value=2.2e-05 Score=83.07 Aligned_cols=96 Identities=14% Similarity=0.100 Sum_probs=64.3
Q ss_pred CcccEEEEEcCCcchH---HHHHHHc-CC--EEEEEecCCCchhHH----HHHhcC---CccEEEeccCcCCCCCCcccE
Q 047630 235 GTIRIGLDIGGGVATF---AVRMMER-NI--TIVTTSMNLNGPFNN----FIASRG---VVPLYISISQRLPFFDNTLDI 301 (392)
Q Consensus 235 ~~ir~VLDIGCGtG~~---a~~La~~-g~--~vvg~~iD~~a~~~~----~aa~rg---~i~~~~~d~~~Lpf~d~sFDl 301 (392)
.+..+|||||||+|-+ +...+++ +. +|++++ .+ ++.. ...+++ .|+++.++++++..+ +.+|+
T Consensus 356 ~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVE--kn-p~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDI 431 (637)
T 4gqb_A 356 TNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVE--KN-PNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADI 431 (637)
T ss_dssp TCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEE--SC-HHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEE
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEE--CC-HHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCE
Confidence 3445689999999987 4444433 33 567744 42 2322 222333 489999999998765 57999
Q ss_pred EEEcccccccCCchhHHHHHHHHHHcccCCcEEE
Q 047630 302 VHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFW 335 (392)
Q Consensus 302 V~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~li 335 (392)
|++=..= .+...+.+..++....|.|||||+++
T Consensus 432 IVSEwMG-~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 432 IVSELLG-SFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EECCCCB-TTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEcCc-ccccccCCHHHHHHHHHhcCCCcEEc
Confidence 9986433 22334555678888999999999983
No 274
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.82 E-value=3.5e-05 Score=72.74 Aligned_cols=73 Identities=18% Similarity=0.251 Sum_probs=47.0
Q ss_pred ccEEEeccCc-CCCCCC----cccEEEEc-ccccccCCch-hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHH
Q 047630 282 VPLYISISQR-LPFFDN----TLDIVHSM-HVLSNWIPTT-LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLI 354 (392)
Q Consensus 282 i~~~~~d~~~-Lpf~d~----sFDlV~s~-~~l~~~~~~~-~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll 354 (392)
+.++.+|+.+ ++..+. .||+|+.- +.... .++ --..++.+++|+|||||+|+. +... ..++..+
T Consensus 152 l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~--~p~lw~~~~l~~l~~~L~pGG~l~t---ysaa----~~vrr~L 222 (257)
T 2qy6_A 152 LDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAK--NPDMWTQNLFNAMARLARPGGTLAT---FTSA----GFVRRGL 222 (257)
T ss_dssp EEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTT--CGGGCCHHHHHHHHHHEEEEEEEEE---SCCB----HHHHHHH
T ss_pred EEEEECcHHHHHhhcccccCCeEEEEEECCCCccc--ChhhcCHHHHHHHHHHcCCCcEEEE---EeCC----HHHHHHH
Confidence 4567777655 443322 79999974 22211 111 124689999999999999974 2222 2367788
Q ss_pred HHcCCeEEE
Q 047630 355 ESVGFNKLK 363 (392)
Q Consensus 355 ~~aGf~~i~ 363 (392)
.++||++.+
T Consensus 223 ~~aGF~v~~ 231 (257)
T 2qy6_A 223 QEAGFTMQK 231 (257)
T ss_dssp HHHTEEEEE
T ss_pred HHCCCEEEe
Confidence 889999664
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.79 E-value=6.1e-05 Score=80.82 Aligned_cols=97 Identities=14% Similarity=0.011 Sum_probs=63.0
Q ss_pred EEEEcCCcchHHHHHHHc--------------------------------------------CCEEEEEecCCCchhHH-
Q 047630 240 GLDIGGGVATFAVRMMER--------------------------------------------NITIVTTSMNLNGPFNN- 274 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~--------------------------------------------g~~vvg~~iD~~a~~~~- 274 (392)
+||.+||+|.++...+.. ...++|+|+|. ...+
T Consensus 194 llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~--~av~~ 271 (703)
T 3v97_A 194 LLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDA--RVIQR 271 (703)
T ss_dssp EEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCH--HHHHH
T ss_pred EEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCH--HHHHH
Confidence 499999999998776653 14688866554 3333
Q ss_pred ---HHHhcCC---ccEEEeccCcC--CCCCCcccEEEEcccccc-cCCchhHHHHHHHHHHc---ccCCcEEEEEe
Q 047630 275 ---FIASRGV---VPLYISISQRL--PFFDNTLDIVHSMHVLSN-WIPTTLLHFLMFDIYRV---LRPGGLFWLDH 338 (392)
Q Consensus 275 ---~aa~rg~---i~~~~~d~~~L--pf~d~sFDlV~s~~~l~~-~~~~~~l~~~L~el~Rv---LKPGG~lii~~ 338 (392)
++...|+ +.+.++|+..+ |..+++||+|+++-.+.. +.+...+..+.+.+.++ +.|||.+++..
T Consensus 272 A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 272 ARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 3334453 67889998887 444458999999955432 23344555555555544 45799987653
No 276
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.71 E-value=2.3e-05 Score=78.45 Aligned_cols=90 Identities=9% Similarity=-0.016 Sum_probs=61.8
Q ss_pred EEEEcCCcchHHHHHHHc--C-CEEEEEecCCCchhHH----HHHhcCC----ccEEEeccCcC-C-CCCCcccEEEEcc
Q 047630 240 GLDIGGGVATFAVRMMER--N-ITIVTTSMNLNGPFNN----FIASRGV----VPLYISISQRL-P-FFDNTLDIVHSMH 306 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~--g-~~vvg~~iD~~a~~~~----~aa~rg~----i~~~~~d~~~L-p-f~d~sFDlV~s~~ 306 (392)
|||++||+|.++..++++ | ..|++ +|++....+ ++..+++ +.++.+|+..+ . ...+.||+|++.-
T Consensus 56 VLDlfaGtG~~sl~aa~~~~ga~~V~a--vDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP 133 (392)
T 3axs_A 56 VADPLSASGIRAIRFLLETSCVEKAYA--NDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDP 133 (392)
T ss_dssp EEESSCTTSHHHHHHHHHCSCEEEEEE--ECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECC
T ss_pred EEECCCcccHHHHHHHHhCCCCCEEEE--EECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECC
Confidence 499999999999999984 5 46777 445334333 3334443 56777776543 1 2246799999765
Q ss_pred cccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 307 VLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 307 ~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
. .. ...++..+.+.|++||+++++.
T Consensus 134 -~---g~---~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 134 -F---GT---PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp -S---SC---CHHHHHHHHHHEEEEEEEEEEE
T ss_pred -C---cC---HHHHHHHHHHHhCCCCEEEEEe
Confidence 1 11 1348889999999999998875
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.71 E-value=2.9e-05 Score=82.53 Aligned_cols=98 Identities=17% Similarity=0.153 Sum_probs=65.0
Q ss_pred ccEEEEEcCCcchHHHH---HHH-cC-----------CEEEEEecCCCchhH-HHHHhcC---CccEEEeccCcCCCC--
Q 047630 237 IRIGLDIGGGVATFAVR---MME-RN-----------ITIVTTSMNLNGPFN-NFIASRG---VVPLYISISQRLPFF-- 295 (392)
Q Consensus 237 ir~VLDIGCGtG~~a~~---La~-~g-----------~~vvg~~iD~~a~~~-~~aa~rg---~i~~~~~d~~~Lpf~-- 295 (392)
..+|||||||+|-+... .++ .+ ..|++++.+..+... +....++ .|.++.++++++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 34689999999998532 221 22 377775543211111 1222233 489999999988764
Q ss_pred ---CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEE
Q 047630 296 ---DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFW 335 (392)
Q Consensus 296 ---d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~li 335 (392)
.+..|+|++-..- .+.+.+.....|..+.|.|||||+++
T Consensus 490 ~~~~ekVDIIVSElmG-sfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLG-SFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCB-TTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEeccc-cccchhccHHHHHHHHHhCCCCcEEE
Confidence 5789999997543 33455656678888999999999884
No 278
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.67 E-value=3e-05 Score=72.90 Aligned_cols=73 Identities=12% Similarity=0.175 Sum_probs=49.7
Q ss_pred HhhCCCCcccEEEEEcCCcchHHHHHHHcCCE--EEEEecCCCchhHHHHHhcC----CccEEEeccCcCCCCCC-----
Q 047630 229 LATKKPGTIRIGLDIGGGVATFAVRMMERNIT--IVTTSMNLNGPFNNFIASRG----VVPLYISISQRLPFFDN----- 297 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~--vvg~~iD~~a~~~~~aa~rg----~i~~~~~d~~~Lpf~d~----- 297 (392)
+.+.++.+| ||||||+|.++. +.+ +.. +++ +|++..+.+.+.++- .+.++++|+..+++++.
T Consensus 17 ~~~~~~~~V---LEIG~G~G~lt~-l~~-~~~~~v~a--vEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~ 89 (252)
T 1qyr_A 17 INPQKGQAM---VEIGPGLAALTE-PVG-ERLDQLTV--IELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMG 89 (252)
T ss_dssp HCCCTTCCE---EEECCTTTTTHH-HHH-TTCSCEEE--ECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHT
T ss_pred cCCCCcCEE---EEECCCCcHHHH-hhh-CCCCeEEE--EECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccC
Confidence 344555556 999999999999 654 566 888 556455655555431 36889999988876432
Q ss_pred cccEEEEcccc
Q 047630 298 TLDIVHSMHVL 308 (392)
Q Consensus 298 sFDlV~s~~~l 308 (392)
..|.|+++..+
T Consensus 90 ~~~~vvsNlPY 100 (252)
T 1qyr_A 90 QPLRVFGNLPY 100 (252)
T ss_dssp SCEEEEEECCT
T ss_pred CceEEEECCCC
Confidence 34677777654
No 279
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.64 E-value=2.6e-05 Score=73.78 Aligned_cols=100 Identities=12% Similarity=0.035 Sum_probs=61.4
Q ss_pred HHHHHHhhCCC--CcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhH-------HHHHhc--------CCccEEE
Q 047630 224 SIDEVLATKKP--GTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFN-------NFIASR--------GVVPLYI 286 (392)
Q Consensus 224 lI~~ll~l~~~--~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~-------~~aa~r--------g~i~~~~ 286 (392)
.+.+.+.+.++ .+| ||+|||+|..+..+++++..|++++.+ .... +.+.++ ..+.++.
T Consensus 77 ~l~~al~l~~g~~~~V---LDl~~G~G~dal~lA~~g~~V~~vE~~--~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~ 151 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDV---VDATAGLGRDAFVLASVGCRVRMLERN--PVVAALLDDGLARGYADAEIGGWLQERLQLIH 151 (258)
T ss_dssp HHHHHTTCBTTBCCCE---EETTCTTCHHHHHHHHHTCCEEEEECC--HHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE
T ss_pred HHHHHhcccCCCCCEE---EEcCCcCCHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE
Confidence 33444555554 455 999999999999999998899995544 3321 111110 1267888
Q ss_pred eccCc-CCCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCc
Q 047630 287 SISQR-LPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGG 332 (392)
Q Consensus 287 ~d~~~-Lpf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG 332 (392)
+|... ++.....||+|++...+.+ .... .++++..++||+.+
T Consensus 152 ~D~~~~L~~~~~~fDvV~lDP~y~~-~~~s---aavkk~~~~lr~l~ 194 (258)
T 2oyr_A 152 ASSLTALTDITPRPQVVYLDPMFPH-KQKS---ALVKKEMRVFQSLV 194 (258)
T ss_dssp SCHHHHSTTCSSCCSEEEECCCCCC-CCC--------HHHHHHHHHS
T ss_pred CCHHHHHHhCcccCCEEEEcCCCCC-cccc---hHHHHHHHHHHHhh
Confidence 88665 3433347999999877744 2212 35666777777755
No 280
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.64 E-value=0.00041 Score=72.24 Aligned_cols=118 Identities=17% Similarity=0.054 Sum_probs=69.9
Q ss_pred EEEEEcCCcchHHHHHHHc-----------------CCEEEEEecCCCchhHHH----HHhcCC---ccEEEeccCcCC-
Q 047630 239 IGLDIGGGVATFAVRMMER-----------------NITIVTTSMNLNGPFNNF----IASRGV---VPLYISISQRLP- 293 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-----------------g~~vvg~~iD~~a~~~~~----aa~rg~---i~~~~~d~~~Lp- 293 (392)
+|||.+||+|.+...+++. ...++| +|++...... +...|. +.+.++|....+
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G--~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~ 324 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYG--QESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ 324 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEE--CCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEE--EeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc
Confidence 4599999999988776431 356777 5553333332 223342 222566654443
Q ss_pred CCCCcccEEEEcccccc--cCCc----------------------h--hHHHHHHHHHHcccCCcEEEEEee---ccccc
Q 047630 294 FFDNTLDIVHSMHVLSN--WIPT----------------------T--LLHFLMFDIYRVLRPGGLFWLDHF---FCVGA 344 (392)
Q Consensus 294 f~d~sFDlV~s~~~l~~--~~~~----------------------~--~l~~~L~el~RvLKPGG~lii~~~---~~~~~ 344 (392)
+.+..||+|+++-.+.. |... . .--.++..+.+.|||||++.+... .....
T Consensus 325 ~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~ 404 (544)
T 3khk_A 325 HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNT 404 (544)
T ss_dssp CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCG
T ss_pred cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcCc
Confidence 45678999999865542 2110 0 011588999999999999866642 12221
Q ss_pred chHHHHHHHHHHcC
Q 047630 345 QLEDVYVPLIESVG 358 (392)
Q Consensus 345 ~l~~~l~~ll~~aG 358 (392)
.....+++.+.+.+
T Consensus 405 ~~~~~iRk~Lle~~ 418 (544)
T 3khk_A 405 NNEGEIRKTLVEQD 418 (544)
T ss_dssp GGHHHHHHHHHHTT
T ss_pred chHHHHHHHHHhCC
Confidence 23344677766654
No 281
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.60 E-value=0.00077 Score=70.13 Aligned_cols=117 Identities=15% Similarity=0.082 Sum_probs=72.6
Q ss_pred EEEEEcCCcchHHHHHHHc-----CCEEEEEecCCCchhHH----HHHhcCC----ccEEEeccCcC--C-CCCCcccEE
Q 047630 239 IGLDIGGGVATFAVRMMER-----NITIVTTSMNLNGPFNN----FIASRGV----VPLYISISQRL--P-FFDNTLDIV 302 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-----g~~vvg~~iD~~a~~~~----~aa~rg~----i~~~~~d~~~L--p-f~d~sFDlV 302 (392)
+|||.+||+|.+...+++. ...++|+++|. .... .+..+|. +.+.++|.... | .....||+|
T Consensus 224 ~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~--~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~I 301 (542)
T 3lkd_A 224 TLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNT--STYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGV 301 (542)
T ss_dssp EEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCH--HHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEE
T ss_pred EEeecccchhHHHHHHHHHHHhccCceEEEEECcH--HHHHHHHHHHHHcCCCcCccceEecceecccccccccccccEE
Confidence 4499999999988877764 56788866554 3222 2233443 35778886655 3 356789999
Q ss_pred EEcccccc-cCCc--------------------hhHHHHHHHHHHccc-CCcEEEEEeecc--cccchHHHHHHHHHHcC
Q 047630 303 HSMHVLSN-WIPT--------------------TLLHFLMFDIYRVLR-PGGLFWLDHFFC--VGAQLEDVYVPLIESVG 358 (392)
Q Consensus 303 ~s~~~l~~-~~~~--------------------~~l~~~L~el~RvLK-PGG~lii~~~~~--~~~~l~~~l~~ll~~aG 358 (392)
+++-.+.. |... .+ -.++..+.+.|| |||++.+..... ........+++.+-+.+
T Consensus 302 vaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~ 380 (542)
T 3lkd_A 302 LMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEG 380 (542)
T ss_dssp EECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTT
T ss_pred EecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhCC
Confidence 99854421 1100 01 148999999999 999996654321 11222344666666654
No 282
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.60 E-value=5.3e-05 Score=71.26 Aligned_cols=143 Identities=15% Similarity=0.084 Sum_probs=77.2
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc-CC-EEEEEecCCCchhHHHHHh-cC--CccEEEe-ccCcCCCCCCcccEEEE
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER-NI-TIVTTSMNLNGPFNNFIAS-RG--VVPLYIS-ISQRLPFFDNTLDIVHS 304 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~-g~-~vvg~~iD~~a~~~~~aa~-rg--~i~~~~~-d~~~Lpf~d~sFDlV~s 304 (392)
+.+++.| ||+||+.|.++.+.++. ++ .|.|..+.++.+....... .| .+.+..+ |+..++ ...+|+|+|
T Consensus 71 ikpg~~V---VDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~DvVLS 145 (269)
T 2px2_A 71 VQPIGKV---VDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKP--SEISDTLLC 145 (269)
T ss_dssp CCCCEEE---EEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSC--CCCCSEEEE
T ss_pred CCCCCEE---EEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCC--CCCCCEEEe
Confidence 3455555 99999999999999985 33 2334322221000000000 22 1234446 777643 557999999
Q ss_pred cccccc---cCCchhHHHHHHHHHHcccCCc-EEEEEeecccccchHHHHHHHHHHcCCeEEEEEEeeccCCCCccccee
Q 047630 305 MHVLSN---WIPTTLLHFLMFDIYRVLRPGG-LFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGRKLDRGPELREMY 380 (392)
Q Consensus 305 ~~~l~~---~~~~~~l~~~L~el~RvLKPGG-~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~~~~~e~y 380 (392)
-.+-.. ..+......+|.-+.++|+||| .|++-.|....++..+.+..+-.. |..++.+ ... .-.+..|+|
T Consensus 146 DMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~--F~~vkvk--~pa-SR~~S~E~Y 220 (269)
T 2px2_A 146 DIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRR--FGGGLVR--VPL-SRNSNHEMY 220 (269)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHH--HCCEEEC--CTT-SCTTCCCEE
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHH--cCCEEEE--CCC-CCCCCccEE
Confidence 765531 1111111125666669999999 898877664334444433333333 5666532 221 123456888
Q ss_pred eEE
Q 047630 381 LSA 383 (392)
Q Consensus 381 lsa 383 (392)
+.+
T Consensus 221 lVa 223 (269)
T 2px2_A 221 WVS 223 (269)
T ss_dssp EET
T ss_pred EEe
Confidence 743
No 283
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.53 E-value=0.00027 Score=67.73 Aligned_cols=139 Identities=12% Similarity=0.087 Sum_probs=76.8
Q ss_pred cEEEEEcCCcchHHHHHHHc-CC-EEEEEecCCCchhHHHH-HhcC--CccEEEeccCcCCCCCCcccEEEEcccccc--
Q 047630 238 RIGLDIGGGVATFAVRMMER-NI-TIVTTSMNLNGPFNNFI-ASRG--VVPLYISISQRLPFFDNTLDIVHSMHVLSN-- 310 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~-g~-~vvg~~iD~~a~~~~~a-a~rg--~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~-- 310 (392)
..|||+||++|.|+..++++ ++ .|+++++..+....... ...+ ++.+ .....-..+..+.+|+|+|..+...
T Consensus 83 ~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~-~~~~di~~l~~~~~DlVlsD~APnsG~ 161 (300)
T 3eld_A 83 GRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKF-KDKSNVFTMPTEPSDTLLCDIGESSSN 161 (300)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEE-ECSCCTTTSCCCCCSEEEECCCCCCSS
T ss_pred CEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEe-ecCceeeecCCCCcCEEeecCcCCCCC
Confidence 44599999999999999985 43 45664443211000000 0001 1122 2222223345678999999876651
Q ss_pred -cCCchhHHHHHHHHHHcccCC-cEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEeeccCCCCcccceeeE
Q 047630 311 -WIPTTLLHFLMFDIYRVLRPG-GLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGRKLDRGPELREMYLS 382 (392)
Q Consensus 311 -~~~~~~l~~~L~el~RvLKPG-G~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~~~~~e~yls 382 (392)
..+......+|.-+.++|+|| |.|++-.|..-.++..+ +...+++. |..+....- .- -....|.|+.
T Consensus 162 ~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~-ll~~lk~~-F~~V~~~KP--aS-R~~S~E~Y~V 230 (300)
T 3eld_A 162 PLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIE-KLERLQLR-FGGGIVRVP--FS-RNSTHEMYYI 230 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHH-HHHHHHHH-HCCEEECCT--TS-CTTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHH-HHHHHHHh-CCcEEEEeC--CC-CCCChHHeee
Confidence 111222234577778999999 99999866532334333 44455554 676665422 11 1245677763
No 284
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.50 E-value=0.00044 Score=59.80 Aligned_cols=87 Identities=9% Similarity=0.134 Sum_probs=60.7
Q ss_pred CCCCcccEEEEEcCCcc-hHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCC--CcccEEEEccc
Q 047630 232 KKPGTIRIGLDIGGGVA-TFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFD--NTLDIVHSMHV 307 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGtG-~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d--~sFDlV~s~~~ 307 (392)
.+++++ ||||||.| ..|..|++ .|.+|+++|++..+ ++++.+|+.+ |..+ ..||+|.+...
T Consensus 34 ~~~~rV---lEVG~G~g~~vA~~La~~~g~~V~atDInp~A-----------v~~v~dDiF~-P~~~~Y~~~DLIYsirP 98 (153)
T 2k4m_A 34 GPGTRV---VEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSH-----------GGIVRDDITS-PRMEIYRGAALIYSIRP 98 (153)
T ss_dssp CSSSEE---EEETCTTCCHHHHHHHHHSCCEEEEECSSCSS-----------TTEECCCSSS-CCHHHHTTEEEEEEESC
T ss_pred CCCCcE---EEEccCCChHHHHHHHHhCCCeEEEEECCccc-----------cceEEccCCC-CcccccCCcCEEEEcCC
Confidence 334566 99999999 69999998 99999998877633 2377788766 3332 37999987664
Q ss_pred ccccCCchhHHHHHHHHHHcccCCcEEEEEeecc
Q 047630 308 LSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 308 l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~ 341 (392)
. .++...+.++.+. -|.-++|..+..
T Consensus 99 P------~El~~~i~~lA~~--v~adliI~pL~~ 124 (153)
T 2k4m_A 99 P------AEIHSSLMRVADA--VGARLIIKPLTG 124 (153)
T ss_dssp C------TTTHHHHHHHHHH--HTCEEEEECBTT
T ss_pred C------HHHHHHHHHHHHH--cCCCEEEEcCCC
Confidence 3 3334455666554 357788887655
No 285
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.46 E-value=7.4e-05 Score=72.14 Aligned_cols=81 Identities=15% Similarity=0.124 Sum_probs=53.8
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhc-----CCccEEEeccCcCC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIASR-----GVVPLYISISQRLP 293 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r-----g~i~~~~~d~~~Lp 293 (392)
.+..++. +.+.+++.+ ||+|||+|.++..+++. +..++++|+| ..+.+.+.++ ..+.++++|+..++
T Consensus 15 l~e~l~~-L~~~~g~~v---LD~g~G~G~~s~~la~~~~~~~VigvD~d--~~al~~A~~~~~~~g~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 15 VREVIEF-LKPEDEKII---LDCTVGEGGHSRAILEHCPGCRIIGIDVD--SEVLRIAEEKLKEFSDRVSLFKVSYREAD 88 (301)
T ss_dssp HHHHHHH-HCCCTTCEE---EETTCTTSHHHHHHHHHCTTCEEEEEESC--HHHHHHHHHHTGGGTTTEEEEECCGGGHH
T ss_pred HHHHHHh-cCCCCCCEE---EEEeCCcCHHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHhcCCcEEEEECCHHHHH
Confidence 3444433 334455555 99999999999999986 4788885544 4554433332 24788999988775
Q ss_pred C--C---CCcccEEEEccc
Q 047630 294 F--F---DNTLDIVHSMHV 307 (392)
Q Consensus 294 f--~---d~sFDlV~s~~~ 307 (392)
. . .++||.|++...
T Consensus 89 ~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 89 FLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp HHHHHTTCSCEEEEEEECS
T ss_pred HHHHhcCCCCCCEEEEcCc
Confidence 2 1 157999997543
No 286
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.42 E-value=0.00034 Score=63.68 Aligned_cols=90 Identities=12% Similarity=0.068 Sum_probs=58.5
Q ss_pred cEEEEEcCCcchHHHHHHHc-CCEEEEEecCCCchhHH----HHHhcCC-----ccEEEeccCc---------------C
Q 047630 238 RIGLDIGGGVATFAVRMMER-NITIVTTSMNLNGPFNN----FIASRGV-----VPLYISISQR---------------L 292 (392)
Q Consensus 238 r~VLDIGCGtG~~a~~La~~-g~~vvg~~iD~~a~~~~----~aa~rg~-----i~~~~~d~~~---------------L 292 (392)
+.|||+||| +-+..|++. +..+++++.| ....+ ...+.|. +.++.+++.. +
T Consensus 32 ~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d--~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 32 EVILEYGSG--GSTVVAAELPGKHVTSVESD--RAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp SEEEEESCS--HHHHHHHTSTTCEEEEEESC--HHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CEEEEECch--HHHHHHHHcCCCEEEEEeCC--HHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 344999985 677777775 5788885544 34443 2333343 6778887543 2
Q ss_pred C--------C-CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 293 P--------F-FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 293 p--------f-~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
+ . ..++||+|+.-.-.. ...+..+.+.|+|||+++++++
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k~--------~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRFR--------VGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSSH--------HHHHHHHHHHCSSCEEEEETTG
T ss_pred HHHhhhhhccccCCCCCEEEEeCCCc--------hhHHHHHHHhcCCCeEEEEeCC
Confidence 2 1 237899999765321 1355667799999999999985
No 287
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.34 E-value=9.9e-05 Score=74.24 Aligned_cols=66 Identities=14% Similarity=0.059 Sum_probs=47.9
Q ss_pred EEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHH----HHhc--CC--ccEEEeccCcC-CC-CCCcccEEEEccc
Q 047630 240 GLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNF----IASR--GV--VPLYISISQRL-PF-FDNTLDIVHSMHV 307 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~----aa~r--g~--i~~~~~d~~~L-pf-~d~sFDlV~s~~~ 307 (392)
|||+|||+|..+..+++.+..|+++|+| ..+.+. +... |. +.++++|+..+ +. .+++||+|++.-.
T Consensus 97 VLDLgcG~G~~al~LA~~g~~V~~VD~s--~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 97 VVDLTGGLGIDFIALMSKASQGIYIERN--DETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPA 172 (410)
T ss_dssp EEESSCSSSHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCE
T ss_pred EEEeCCCchHHHHHHHhcCCEEEEEECC--HHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCC
Confidence 4999999999999999999999996654 344432 2222 43 78889998764 32 2468999998643
No 288
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.33 E-value=0.001 Score=65.67 Aligned_cols=131 Identities=15% Similarity=0.024 Sum_probs=80.9
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCC--EEEEEecCCCchhHHHHH----hcC--------CccEEE
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNI--TIVTTSMNLNGPFNNFIA----SRG--------VVPLYI 286 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~--~vvg~~iD~~a~~~~~aa----~rg--------~i~~~~ 286 (392)
...+...++...++.+| ||+.+|.|.=+.++++.+. .+++ +|++......+. +.+ .+.+..
T Consensus 136 aS~l~~~~L~~~pg~~V---LD~CAaPGGKT~~la~~~~~~~l~A--~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~ 210 (359)
T 4fzv_A 136 ASLLPVLALGLQPGDIV---LDLCAAPGGKTLALLQTGCCRNLAA--NDLSPSRIARLQKILHSYVPEEIRDGNQVRVTS 210 (359)
T ss_dssp GGHHHHHHHCCCTTEEE---EESSCTTCHHHHHHHHTTCEEEEEE--ECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEEC
T ss_pred HHHHHHHHhCCCCCCEE---EEecCCccHHHHHHHHhcCCCcEEE--EcCCHHHHHHHHHHHHHhhhhhhccCCceEEEe
Confidence 45566677777777776 9999999999999998765 4555 566444443222 111 244555
Q ss_pred eccCcCC-CCCCcccEEEEc----c---cccccC-------Cch-------hHHHHHHHHHHcccCCcEEEEEeeccccc
Q 047630 287 SISQRLP-FFDNTLDIVHSM----H---VLSNWI-------PTT-------LLHFLMFDIYRVLRPGGLFWLDHFFCVGA 344 (392)
Q Consensus 287 ~d~~~Lp-f~d~sFDlV~s~----~---~l~~~~-------~~~-------~l~~~L~el~RvLKPGG~lii~~~~~~~~ 344 (392)
.|...++ ...+.||.|+.- . ....-. ... ...++|..+.+.|||||+|+.+..--..+
T Consensus 211 ~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 211 WDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp CCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred CchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 6666553 346789999953 2 111100 001 12468889999999999998887543333
Q ss_pred chHHHHHHHHHH
Q 047630 345 QLEDVYVPLIES 356 (392)
Q Consensus 345 ~l~~~l~~ll~~ 356 (392)
+-++.+...+++
T Consensus 291 ENE~vV~~~L~~ 302 (359)
T 4fzv_A 291 QNEYVVQGAIEL 302 (359)
T ss_dssp TTHHHHHHHHHH
T ss_pred hCHHHHHHHHHh
Confidence 434445555543
No 289
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.24 E-value=0.0018 Score=61.92 Aligned_cols=128 Identities=13% Similarity=0.122 Sum_probs=81.0
Q ss_pred HHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHc-------CCEEEEEecCCCc----------h--------------h
Q 047630 224 SIDEVLATKKPGTIRIGLDIGGGVATFAVRMMER-------NITIVTTSMNLNG----------P--------------F 272 (392)
Q Consensus 224 lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~-------g~~vvg~~iD~~a----------~--------------~ 272 (392)
++..+......+.| ||+|+..|..+..|++. +.+++++|..-.. + .
T Consensus 97 l~~~v~~~~~pg~I---lEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~ 173 (282)
T 2wk1_A 97 CVEDVIGNNVPGDL---VETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVS 173 (282)
T ss_dssp HHHHHHHTTCCCEE---EEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCC
T ss_pred HHHHHHhcCCCCcE---EEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhH
Confidence 34444433333555 99999999988777651 5678886643110 0 0
Q ss_pred ----HHHHHhcC----CccEEEeccCc-CC-CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeeccc
Q 047630 273 ----NNFIASRG----VVPLYISISQR-LP-FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCV 342 (392)
Q Consensus 273 ----~~~aa~rg----~i~~~~~d~~~-Lp-f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~ 342 (392)
.+...+.| .+.++.+++.+ +| +++++||+|+.-.-. .+.....|..+.+.|+|||+++++++..
T Consensus 174 ~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~-----y~~~~~~Le~~~p~L~pGGiIv~DD~~~- 247 (282)
T 2wk1_A 174 EEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL-----YESTWDTLTNLYPKVSVGGYVIVDDYMM- 247 (282)
T ss_dssp HHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS-----HHHHHHHHHHHGGGEEEEEEEEESSCTT-
T ss_pred HHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc-----cccHHHHHHHHHhhcCCCEEEEEcCCCC-
Confidence 11223323 37788887543 44 335789999976432 1233468899999999999999999843
Q ss_pred ccchHHHHHHHHHHcCCe
Q 047630 343 GAQLEDVYVPLIESVGFN 360 (392)
Q Consensus 343 ~~~l~~~l~~ll~~aGf~ 360 (392)
+....+.+.+..++.|.+
T Consensus 248 ~~G~~~Av~Ef~~~~~i~ 265 (282)
T 2wk1_A 248 CPPCKDAVDEYRAKFDIA 265 (282)
T ss_dssp CHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHhcCCc
Confidence 233455688888887743
No 290
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.17 E-value=0.0046 Score=66.82 Aligned_cols=117 Identities=7% Similarity=-0.037 Sum_probs=67.6
Q ss_pred EEEEEcCCcchHHHHHHHcC-----CEEEEEecCCCchhHHHH--H---h-----cCC--ccEEEeccCcC-CCCCCccc
Q 047630 239 IGLDIGGGVATFAVRMMERN-----ITIVTTSMNLNGPFNNFI--A---S-----RGV--VPLYISISQRL-PFFDNTLD 300 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g-----~~vvg~~iD~~a~~~~~a--a---~-----rg~--i~~~~~d~~~L-pf~d~sFD 300 (392)
+|||.|||+|.++..+++.. ..++|+|+|. .....+ . . .+. ..+...+.... +...+.||
T Consensus 324 rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp--~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFD 401 (878)
T 3s1s_A 324 VISDPAAGSGNLLATVSAGFNNVMPRQIWANDIET--LFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVS 401 (878)
T ss_dssp EEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCG--GGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEE
T ss_pred EEEECCCCccHHHHHHHHHhcccCCCeEEEEECCH--HHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCC
Confidence 45999999999999988743 3678855554 333322 1 1 121 12333344332 23457899
Q ss_pred EEEEcccccc-cCCch-------------------------hHHHHHHHHHHcccCCcEEEEEeecc---cccchHHHHH
Q 047630 301 IVHSMHVLSN-WIPTT-------------------------LLHFLMFDIYRVLRPGGLFWLDHFFC---VGAQLEDVYV 351 (392)
Q Consensus 301 lV~s~~~l~~-~~~~~-------------------------~l~~~L~el~RvLKPGG~lii~~~~~---~~~~l~~~l~ 351 (392)
+|+++-.+.. ..... ....++..+.+.|||||++.+..... ......+.++
T Consensus 402 VVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLR 481 (878)
T 3s1s_A 402 VVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFR 481 (878)
T ss_dssp EEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHH
T ss_pred EEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHHH
Confidence 9999966632 11111 12347888999999999997665321 1122234466
Q ss_pred HHHHHc
Q 047630 352 PLIESV 357 (392)
Q Consensus 352 ~ll~~a 357 (392)
+.+.+.
T Consensus 482 k~LLe~ 487 (878)
T 3s1s_A 482 EFLVGN 487 (878)
T ss_dssp HHHTTT
T ss_pred HHHHhC
Confidence 665543
No 291
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.11 E-value=0.003 Score=60.54 Aligned_cols=136 Identities=14% Similarity=0.053 Sum_probs=80.6
Q ss_pred CCCcccEEEEEcC------CcchHH-HHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEc
Q 047630 233 KPGTIRIGLDIGG------GVATFA-VRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSM 305 (392)
Q Consensus 233 ~~~~ir~VLDIGC------GtG~~a-~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~ 305 (392)
.+.+| ||+|+ -.|.+. ..+...|..++++|+.. ... ..--++++|...+.. .+.||+|+|-
T Consensus 109 ~gmrV---LDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~---~~s-----da~~~IqGD~~~~~~-~~k~DLVISD 176 (344)
T 3r24_A 109 YNMRV---IHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLND---FVS-----DADSTLIGDCATVHT-ANKWDLIISD 176 (344)
T ss_dssp TTCEE---EEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSC---CBC-----SSSEEEESCGGGEEE-SSCEEEEEEC
T ss_pred CCCEE---EeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcc---ccc-----CCCeEEEcccccccc-CCCCCEEEec
Confidence 34555 99996 456632 22322345677755443 211 111347888765443 4789999986
Q ss_pred ccccc--cCCc------hhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEeeccCCCCccc
Q 047630 306 HVLSN--WIPT------TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGRKLDRGPELR 377 (392)
Q Consensus 306 ~~l~~--~~~~------~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~~~~~ 377 (392)
.+-.- ..+. .-.+.++.=+.++|+|||.|++-.|...+. +.+.++.+ -|+.++... . .-+ .+..
T Consensus 177 MAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~---~~L~~lrk--~F~~VK~fK-~-ASR-a~Ss 248 (344)
T 3r24_A 177 MYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN---ADLYKLMG--HFSWWTAFV-T-NVN-ASSS 248 (344)
T ss_dssp CCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC---HHHHHHHT--TEEEEEEEE-E-GGG-TTSS
T ss_pred CCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH---HHHHHHHh--hCCeEEEEC-C-CCC-CCCe
Confidence 44321 0111 124556666778999999999998877663 33555554 488887774 2 111 3567
Q ss_pred ceeeEEEEEcC
Q 047630 378 EMYLSALLEKP 388 (392)
Q Consensus 378 e~ylsai~~Kp 388 (392)
|+|+.++-.|-
T Consensus 249 EvYLVG~gfKg 259 (344)
T 3r24_A 249 EAFLIGANYLG 259 (344)
T ss_dssp CEEEEEEEECS
T ss_pred eEEEEeeeccC
Confidence 99987665553
No 292
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.92 E-value=0.0055 Score=58.82 Aligned_cols=124 Identities=19% Similarity=0.209 Sum_probs=75.8
Q ss_pred cccEEEEEcCCcchHHHHHHHc-C-CEEEEEecCCCchhHHHHHh-----------cCCccEEEeccCcC-CCCCCcccE
Q 047630 236 TIRIGLDIGGGVATFAVRMMER-N-ITIVTTSMNLNGPFNNFIAS-----------RGVVPLYISISQRL-PFFDNTLDI 301 (392)
Q Consensus 236 ~ir~VLDIGCGtG~~a~~La~~-g-~~vvg~~iD~~a~~~~~aa~-----------rg~i~~~~~d~~~L-pf~d~sFDl 301 (392)
+.+.||=||.|.|..+..+.+. + ..++.+++|. ...+.+.+ ...++++.+|...+ .-..++||+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~--~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDA--GVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCH--HHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCH--HHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 4455699999999999999985 2 4677756554 33332111 12367888886553 445688999
Q ss_pred EEEcccccccCCchh--HHHHHHHHHHcccCCcEEEEEe--ecccccchHHHHHHHHHHcCCeEEEE
Q 047630 302 VHSMHVLSNWIPTTL--LHFLMFDIYRVLRPGGLFWLDH--FFCVGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 302 V~s~~~l~~~~~~~~--l~~~L~el~RvLKPGG~lii~~--~~~~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
|+.-.. ....+... -..+++.++|+|+|||+++... .+...+.... +.+.+++. |..+..
T Consensus 161 Ii~D~~-dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~-~~~~l~~~-F~~v~~ 224 (294)
T 3o4f_A 161 IISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAID-SHRKLSHY-FSDVGF 224 (294)
T ss_dssp EEESCC-CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHH-HHHHHHHH-CSEEEE
T ss_pred EEEeCC-CcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHH-HHHHHHhh-CCceee
Confidence 997532 11111111 1358999999999999998753 2222333333 33445555 555543
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.91 E-value=0.0014 Score=62.79 Aligned_cols=116 Identities=14% Similarity=0.087 Sum_probs=68.3
Q ss_pred EEEEEcCCcchHHHHHHH-cCCE-EEEEecCCCchhHH---HHHhc--CCccEEEe-ccCcCCCCCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMME-RNIT-IVTTSMNLNGPFNN---FIASR--GVVPLYIS-ISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~-~g~~-vvg~~iD~~a~~~~---~aa~r--g~i~~~~~-d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
.|||+||++|.++.+.+. .++. |+| +|+.....+ .+... .++.+..+ |+..++- ..+|+|+|--.=..
T Consensus 97 ~VlDLGaapGGwsq~~~~~~gv~~V~a--vdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDigeSs 172 (321)
T 3lkz_A 97 KVIDLGCGRGGWCYYMATQKRVQEVRG--YTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIGESS 172 (321)
T ss_dssp EEEEETCTTCHHHHHHTTCTTEEEEEE--ECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCCCCC
T ss_pred EEEEeCCCCCcHHHHHHhhcCCCEEEE--EEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCEEEEECccCC
Confidence 359999999999997777 4554 777 445332111 00111 13566666 6666653 56999999765211
Q ss_pred ---cCCchhHHHHHHHHHHcccCC-cEEEEEeecccccchHHHHHHHHHHcC
Q 047630 311 ---WIPTTLLHFLMFDIYRVLRPG-GLFWLDHFFCVGAQLEDVYVPLIESVG 358 (392)
Q Consensus 311 ---~~~~~~l~~~L~el~RvLKPG-G~lii~~~~~~~~~l~~~l~~ll~~aG 358 (392)
..+......+|.-+.+.|++| |-|++-.+....++..+.+..+-...|
T Consensus 173 ~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~~lq~~fg 224 (321)
T 3lkz_A 173 SSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKMELLQRRYG 224 (321)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHHHHHHHHC
T ss_pred CChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHHHHHHHhC
Confidence 111112223677778899999 888886554434444443444444433
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.66 E-value=0.005 Score=57.27 Aligned_cols=120 Identities=14% Similarity=0.078 Sum_probs=72.0
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHH-cCCE-EEEEecCCCchhHH---HHHhc--CCccEEEe-ccCcCCCCCCcccEE
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMME-RNIT-IVTTSMNLNGPFNN---FIASR--GVVPLYIS-ISQRLPFFDNTLDIV 302 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~-~g~~-vvg~~iD~~a~~~~---~aa~r--g~i~~~~~-d~~~Lpf~d~sFDlV 302 (392)
+.+++. |||+||++|.++.+.+. .++. |++ +|+.....+ ..... +.+.|..+ |+..++- ..+|.|
T Consensus 76 l~~g~~---VvDLGaapGGWSq~~a~~~g~~~V~a--vdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~--~~~Dtl 148 (267)
T 3p8z_A 76 VIPEGR---VIDLGCGRGGWSYYCAGLKKVTEVRG--YTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPP--EKCDTL 148 (267)
T ss_dssp SCCCEE---EEEESCTTSHHHHHHHTSTTEEEEEE--ECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCC--CCCSEE
T ss_pred CCCCCE---EEEcCCCCCcHHHHHHHhcCCCEEEE--EecCCCCccCcchhhhcCcCceEEEeccceeecCC--ccccEE
Confidence 445444 49999999999997777 4554 677 555333221 11122 24788888 7776653 669999
Q ss_pred EEcccccccC---CchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcC
Q 047630 303 HSMHVLSNWI---PTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVG 358 (392)
Q Consensus 303 ~s~~~l~~~~---~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aG 358 (392)
+|-..-..-. +......+|+-+.+.|++ |-|++-.+.....+..+.+..+-...|
T Consensus 149 lcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l~~lq~~fg 206 (267)
T 3p8z_A 149 LCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLERLQRKHG 206 (267)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHHHHHHHHHC
T ss_pred EEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHHHHHHHHhC
Confidence 9986653311 111222367777899998 788886554444444343444444433
No 295
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.55 E-value=0.0093 Score=59.16 Aligned_cols=124 Identities=10% Similarity=0.085 Sum_probs=71.7
Q ss_pred ccEEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHHHHHhc--------------CCccEEEeccCcC----CCCCC
Q 047630 237 IRIGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNNFIASR--------------GVVPLYISISQRL----PFFDN 297 (392)
Q Consensus 237 ir~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~~aa~r--------------g~i~~~~~d~~~L----pf~d~ 297 (392)
.+.||=||.|.|..+..+.+.. ..++.+++| ....+.+.+. ..++++.+|+..+ .-..+
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~~~V~~VEID--p~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKPKMVTMVEID--QMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCSEEEEEESC--HHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCeEEEECCCcHHHHHHHHhcCCceeEEEccC--HHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 3566999999999999998854 356665544 3444333221 1145666775432 12346
Q ss_pred cccEEEEccccccc-CC----c--hhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEE
Q 047630 298 TLDIVHSMHVLSNW-IP----T--TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 298 sFDlV~s~~~l~~~-~~----~--~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~ 363 (392)
+||+|+.-..-... .+ . .--+.+++.++++|+|||+++...-.....+....+.+.+++. |..+.
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~v-F~~v~ 355 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRL-YCPVE 355 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTS-SSCEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHh-CCcce
Confidence 89999975321100 00 1 1124678999999999999987532111112234466667776 44443
No 296
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.13 E-value=0.035 Score=53.49 Aligned_cols=75 Identities=9% Similarity=0.031 Sum_probs=47.9
Q ss_pred cEEEeccCc-CC-CCCCcccEEEEcccccccCCch-hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCC
Q 047630 283 PLYISISQR-LP-FFDNTLDIVHSMHVLSNWIPTT-LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGF 359 (392)
Q Consensus 283 ~~~~~d~~~-Lp-f~d~sFDlV~s~~~l~~~~~~~-~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf 359 (392)
.+..+|+.. ++ +.+..||+|+.-. +..-..++ --+.+++.++|.++|||.|.- ++.. ..+++.|.++||
T Consensus 169 ~l~~GDa~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laT---Ytaa----g~VRR~L~~aGF 240 (308)
T 3vyw_A 169 KVLLGDARKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVS---YSSS----LSVRKSLLTLGF 240 (308)
T ss_dssp EEEESCHHHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEE---SCCC----HHHHHHHHHTTC
T ss_pred EEEechHHHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEE---EeCc----HHHHHHHHHCCC
Confidence 456677543 33 2345799998742 22212222 124799999999999999863 3322 337779999999
Q ss_pred eEEEEE
Q 047630 360 NKLKWV 365 (392)
Q Consensus 360 ~~i~w~ 365 (392)
++-+-.
T Consensus 241 ~V~k~~ 246 (308)
T 3vyw_A 241 KVGSSR 246 (308)
T ss_dssp EEEEEE
T ss_pred EEEecC
Confidence 976644
No 297
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=95.84 E-value=0.01 Score=56.59 Aligned_cols=79 Identities=14% Similarity=0.025 Sum_probs=52.6
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHh--cCCccEEEeccCcCCC----
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIAS--RGVVPLYISISQRLPF---- 294 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~--rg~i~~~~~d~~~Lpf---- 294 (392)
.+..++.+ .+.+++.+ ||.+||.|..+..+++++..++|+|.|. ...+.+.+ .+.+.+++++...++.
T Consensus 11 l~e~le~L-~~~~gg~~---VD~T~G~GGHS~~il~~~g~VigiD~Dp--~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 11 YQEALDLL-AVRPGGVY---VDATLGGAGHARGILERGGRVIGLDQDP--EAVARAKGLHLPGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp HHHHHHHH-TCCTTCEE---EETTCTTSHHHHHHHHTTCEEEEEESCH--HHHHHHHHTCCTTEEEEESCGGGHHHHHHH
T ss_pred HHHHHHhh-CCCCCCEE---EEeCCCCcHHHHHHHHCCCEEEEEeCCH--HHHHHHHhhccCCEEEEECCcchHHHHHHH
Confidence 34444433 35555555 9999999999999999877899966554 34333322 1346788888776631
Q ss_pred -CCCcccEEEEc
Q 047630 295 -FDNTLDIVHSM 305 (392)
Q Consensus 295 -~d~sFDlV~s~ 305 (392)
..++||.|++.
T Consensus 85 ~g~~~vDgIL~D 96 (285)
T 1wg8_A 85 LGVERVDGILAD 96 (285)
T ss_dssp TTCSCEEEEEEE
T ss_pred cCCCCcCEEEeC
Confidence 23579999863
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.73 E-value=0.024 Score=53.97 Aligned_cols=82 Identities=18% Similarity=0.212 Sum_probs=53.6
Q ss_pred ccEEEeccCc-CC-CCCCcccEEEEcccccccCCc-----------------hhHHHHHHHHHHcccCCcEEEEEeeccc
Q 047630 282 VPLYISISQR-LP-FFDNTLDIVHSMHVLSNWIPT-----------------TLLHFLMFDIYRVLRPGGLFWLDHFFCV 342 (392)
Q Consensus 282 i~~~~~d~~~-Lp-f~d~sFDlV~s~~~l~~~~~~-----------------~~l~~~L~el~RvLKPGG~lii~~~~~~ 342 (392)
+.++++|+.. ++ +++++||+|++.-.+....+. ..+..++.++.|+|||||.+++..-...
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~ 101 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVA 101 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEE
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCc
Confidence 5678888665 32 467899999998665321110 1134678899999999999977642110
Q ss_pred ------c----cchHHHHHHHHHHcCCeEEE
Q 047630 343 ------G----AQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 343 ------~----~~l~~~l~~ll~~aGf~~i~ 363 (392)
. -.+...+..+++++||....
T Consensus 102 ~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 102 VARRRFGRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp EECC----EEEECHHHHHHHHHHHTTCEEEE
T ss_pred cccccCCcccccccHHHHHHHHHHcCCeeec
Confidence 0 11234577788999997755
No 299
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.73 E-value=0.039 Score=57.08 Aligned_cols=139 Identities=16% Similarity=0.094 Sum_probs=74.1
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHH----c-----------CCEEEEEecCCCchhHH----HHHhcCC
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMME----R-----------NITIVTTSMNLNGPFNN----FIASRGV 281 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~----~-----------g~~vvg~~iD~~a~~~~----~aa~rg~ 281 (392)
+-.++.+++...++.+| +|-+||+|.|.....+ . ...++|.++|. .... .+.-+|.
T Consensus 205 Vv~lmv~l~~p~~~~~I---~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~--~~~~la~mNl~lhg~ 279 (530)
T 3ufb_A 205 VVRFMVEVMDPQLGESV---LDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKS--LPYLLVQMNLLLHGL 279 (530)
T ss_dssp HHHHHHHHHCCCTTCCE---EETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSH--HHHHHHHHHHHHHTC
T ss_pred HHHHHHHhhccCCCCEE---EeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccH--HHHHHHHHHHHhcCC
Confidence 34444445544444455 9999999999876554 1 24577755443 2222 2222342
Q ss_pred --ccEEEeccCcCCC----CCCcccEEEEcccccccCC-------------chhHHHHHHHHHHccc-------CCcEEE
Q 047630 282 --VPLYISISQRLPF----FDNTLDIVHSMHVLSNWIP-------------TTLLHFLMFDIYRVLR-------PGGLFW 335 (392)
Q Consensus 282 --i~~~~~d~~~Lpf----~d~sFDlV~s~~~l~~~~~-------------~~~l~~~L~el~RvLK-------PGG~li 335 (392)
..+..+|....|. ....||+|+++-.+..-.. ...--.++..+.+.|| |||++.
T Consensus 280 ~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~a 359 (530)
T 3ufb_A 280 EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAA 359 (530)
T ss_dssp SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEE
T ss_pred ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEE
Confidence 3456666555443 2357999999976632110 0111246677777776 799986
Q ss_pred EEeecc--cccchHHHHHHHHHHcCCeEEEEE
Q 047630 336 LDHFFC--VGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 336 i~~~~~--~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
+..... ........+++.+-+. +......
T Consensus 360 vVlP~g~Lf~~~~~~~iRk~Lle~-~~l~aII 390 (530)
T 3ufb_A 360 VVVPNGTLFSDGISARIKEELLKN-FNLHTIV 390 (530)
T ss_dssp EEEEHHHHHCCTHHHHHHHHHHHH-SEEEEEE
T ss_pred EEecchhhhccchHHHHHHHHhhc-CEEEEEE
Confidence 664311 1122223355555443 3444443
No 300
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.57 E-value=0.11 Score=50.48 Aligned_cols=142 Identities=15% Similarity=0.169 Sum_probs=80.1
Q ss_pred EEEEEcCCcchHHHHHHHcCC--E-EEEEecCCCchhHHHHHhc-CCccEEEeccCcCCC---CCCcccEEEEccccccc
Q 047630 239 IGLDIGGGVATFAVRMMERNI--T-IVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPF---FDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~--~-vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf---~d~sFDlV~s~~~l~~~ 311 (392)
+|+|+-||.|.++..+.+.|. + +.+ +|++....+....+ ....++.+|+..+.. +...+|+|+....-..+
T Consensus 4 ~v~dLFaG~Gg~~~g~~~~G~~~~~v~~--~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 4 RVLELYSGVGGMHHALRESCIPAQVVAA--IDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp EEEEETCTTCHHHHHHHHHTCSEEEEEE--ECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred eEEEeCcCccHHHHHHHHCCCCceEEEE--EeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 359999999999999999883 3 555 55533444433333 234577888877642 11258999987553322
Q ss_pred CC-------chhHHHHHHHHHHcc---c--CCcEEEEEeeccc-ccchHHHHHHHHHHcCCeEEEEEEeeccCCC--Ccc
Q 047630 312 IP-------TTLLHFLMFDIYRVL---R--PGGLFWLDHFFCV-GAQLEDVYVPLIESVGFNKLKWVVGRKLDRG--PEL 376 (392)
Q Consensus 312 ~~-------~~~l~~~L~el~RvL---K--PGG~lii~~~~~~-~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~--~~~ 376 (392)
.. .+....++.++.|++ + |. +|++.....- .....+.+.+.+++.||.. .|.+....+.| ...
T Consensus 82 S~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~-~~~~ENV~~l~~~~~~~~i~~~l~~~GY~v-~~~vl~a~~~GvPQ~R 159 (343)
T 1g55_A 82 TRIGRQGDMTDSRTNSFLHILDILPRLQKLPK-YILLENVKGFEVSSTRDLLIQTIENCGFQY-QEFLLSPTSLGIPNSR 159 (343)
T ss_dssp --------------CHHHHHHHHGGGCSSCCS-EEEEEEETTGGGSHHHHHHHHHHHHTTEEE-EEEEECGGGGTCSCCC
T ss_pred hhcCCcCCccCccchHHHHHHHHHHHhcCCCC-EEEEeCCccccCHHHHHHHHHHHHHCCCee-EEEEEEHHHCCCCCcc
Confidence 11 011112455444444 4 54 5555554331 1233455788889999864 67767665553 345
Q ss_pred cceeeEEE
Q 047630 377 REMYLSAL 384 (392)
Q Consensus 377 ~e~ylsai 384 (392)
..+|+.+.
T Consensus 160 ~R~~iv~~ 167 (343)
T 1g55_A 160 LRYFLIAK 167 (343)
T ss_dssp CEEEEEEE
T ss_pred cEEEEEEE
Confidence 55666443
No 301
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.31 E-value=0.26 Score=48.67 Aligned_cols=141 Identities=12% Similarity=0.064 Sum_probs=82.7
Q ss_pred EEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCC--------CCCcccEEEEcccccc
Q 047630 240 GLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPF--------FDNTLDIVHSMHVLSN 310 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf--------~d~sFDlV~s~~~l~~ 310 (392)
++|+-||.|.++..+.+.|.+++. .+|++....+....+ ....++.+|+..+.. ....+|+|+....-..
T Consensus 5 vidLFsG~GGlslG~~~aG~~~v~-avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPCQ~ 83 (376)
T 3g7u_A 5 VIDLFSGVGGLSLGAARAGFDVKM-AVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQG 83 (376)
T ss_dssp EEEETCTTSHHHHHHHHHTCEEEE-EECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCCCT
T ss_pred EEEEccCcCHHHHHHHHCCCcEEE-EEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCCCC
Confidence 499999999999999999987652 355533443333322 234677788776632 2457999998754332
Q ss_pred cC------CchhHHHHHHH---HHHcccCCcEEEEEeecc----cccchHHHHHHHHHHcCCeEEEEEEeeccCCC--Cc
Q 047630 311 WI------PTTLLHFLMFD---IYRVLRPGGLFWLDHFFC----VGAQLEDVYVPLIESVGFNKLKWVVGRKLDRG--PE 375 (392)
Q Consensus 311 ~~------~~~~l~~~L~e---l~RvLKPGG~lii~~~~~----~~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~--~~ 375 (392)
+. ..+....++.+ +.+.+||. +|++..... ......+.+. .+++.||..+.|.+....+.| ..
T Consensus 84 fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~-~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v~~~~vl~a~dyGvPQ~ 161 (376)
T 3g7u_A 84 FSSIGKGNPDDSRNQLYMHFYRLVSELQPL-FFLAENVPGIMQEKYSGIRNKAF-NLVSGDYDILDPIKVKASDYGAPTI 161 (376)
T ss_dssp TC-------CHHHHHHHHHHHHHHHHHCCS-EEEEEECTTTTCGGGHHHHHHHH-HHHHTTEEECCCEEEEGGGGTCSBC
T ss_pred cccccCCCCCCchHHHHHHHHHHHHHhCCC-EEEEecchHhhccCcHHHHHHHH-HHHcCCCccCcEEEEEHhhCCCCCC
Confidence 21 01111234444 44455774 445554322 1223345566 889999987677777766654 34
Q ss_pred ccceeeEE
Q 047630 376 LREMYLSA 383 (392)
Q Consensus 376 ~~e~ylsa 383 (392)
...+|+.+
T Consensus 162 R~R~~iig 169 (376)
T 3g7u_A 162 RTRYFFIG 169 (376)
T ss_dssp CEEEEEEE
T ss_pred CcEEEEEE
Confidence 44555544
No 302
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.29 E-value=0.15 Score=49.60 Aligned_cols=102 Identities=12% Similarity=0.073 Sum_probs=65.3
Q ss_pred ccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHH----HHHhc-----------------------CCccEEEecc
Q 047630 237 IRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNN----FIASR-----------------------GVVPLYISIS 289 (392)
Q Consensus 237 ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~----~aa~r-----------------------g~i~~~~~d~ 289 (392)
.+.|+.+|||....+.++...+..+..+++|. +...+ .+.+. ....++-.|.
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 34569999999999999988544555556776 43333 11121 1234555565
Q ss_pred CcCC--------C-CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc
Q 047630 290 QRLP--------F-FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 290 ~~Lp--------f-~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~ 341 (392)
.+.. . ..+...++++-.++.. .+++....+++.+.+.. |+|.+++.+...
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~Y-L~~~~~~~ll~~ia~~~-~~~~~v~~e~i~ 235 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCY-MHNNESQLLINTIMSKF-SHGLWISYDPIG 235 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGG-SCHHHHHHHHHHHHHHC-SSEEEEEEEECC
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhC-CCHHHHHHHHHHHHhhC-CCcEEEEEeccC
Confidence 4421 1 2245677777777765 67788889999998877 788776555443
No 303
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.05 E-value=0.79 Score=43.54 Aligned_cols=138 Identities=9% Similarity=0.141 Sum_probs=83.0
Q ss_pred EEEEcCCcchHHHHHHHcCCEEE-EEecCCCchhHHHHHhcCCccEEEeccCcCCCC-CCcccEEEEccccccc------
Q 047630 240 GLDIGGGVATFAVRMMERNITIV-TTSMNLNGPFNNFIASRGVVPLYISISQRLPFF-DNTLDIVHSMHVLSNW------ 311 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g~~vv-g~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~-d~sFDlV~s~~~l~~~------ 311 (392)
|||+=||.|.+..-|.+.|.+++ ++++|. ...+....+---.++.+|+..+... -..+|+++....-..+
T Consensus 3 vidLFsG~GG~~~G~~~aG~~~v~a~e~d~--~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~~ 80 (331)
T 3ubt_Y 3 LISLFSGAGGLDLGFQKAGFRIICANEYDK--SIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGSL 80 (331)
T ss_dssp EEEESCTTCHHHHHHHHTTCEEEEEEECCT--TTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTEE
T ss_pred EEEeCcCccHHHHHHHHCCCEEEEEEeCCH--HHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCCCc
Confidence 59999999999999999998865 455544 3333322322235677887776431 1358999876433221
Q ss_pred ---CCchhHHHHHHH---HHHcccCCcEEEEEeecc----cccchHHHHHHHHHHcCCeEEEEEEeeccCCC--Ccccce
Q 047630 312 ---IPTTLLHFLMFD---IYRVLRPGGLFWLDHFFC----VGAQLEDVYVPLIESVGFNKLKWVVGRKLDRG--PELREM 379 (392)
Q Consensus 312 ---~~~~~l~~~L~e---l~RvLKPGG~lii~~~~~----~~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~--~~~~e~ 379 (392)
.++.. .++.+ +.+.+||. +|++..... ......+.+.+.+++.||. +.|.+....+.| +....+
T Consensus 81 ~g~~d~R~--~L~~~~~r~i~~~~Pk-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~-v~~~vlna~~yGvPQ~R~Rv 156 (331)
T 3ubt_Y 81 RGIDDPRG--KLFYEYIRILKQKKPI-FFLAENVKGMMAQRHNKAVQEFIQEFDNAGYD-VHIILLNANDYGVAQDRKRV 156 (331)
T ss_dssp CCTTCGGG--HHHHHHHHHHHHHCCS-EEEEEECCGGGGCTTSHHHHHHHHHHHHHTEE-EEEEEEEGGGTTCSBCCEEE
T ss_pred cCCCCchh--HHHHHHHHHHhccCCe-EEEeeeecccccccccchhhhhhhhhccCCcE-EEEEecccccCCCCcccceE
Confidence 12221 34444 44456785 555555421 2233455677889999987 567777766664 344556
Q ss_pred eeEE
Q 047630 380 YLSA 383 (392)
Q Consensus 380 ylsa 383 (392)
|+.+
T Consensus 157 fivg 160 (331)
T 3ubt_Y 157 FYIG 160 (331)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6644
No 304
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.81 E-value=0.32 Score=46.97 Aligned_cols=140 Identities=14% Similarity=0.143 Sum_probs=79.1
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCC-CCcccEEEEcccccccC----
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFF-DNTLDIVHSMHVLSNWI---- 312 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~-d~sFDlV~s~~~l~~~~---- 312 (392)
+++|+.||.|.++..+.+.|.+++. .+|++....+....+ .... .+|+..+... -..+|+|+.......+.
T Consensus 13 ~~~dLFaG~Gg~~~g~~~aG~~~v~-~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~ag~ 89 (327)
T 2c7p_A 13 RFIDLFAGLGGFRLALESCGAECVY-SNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFSISGK 89 (327)
T ss_dssp EEEEETCTTTHHHHHHHHTTCEEEE-EECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTCTTSC
T ss_pred cEEEECCCcCHHHHHHHHCCCeEEE-EEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcchhcc
Confidence 3499999999999999999987543 345533333322222 1111 5676655321 12589999874443321
Q ss_pred -----C-chhHHHHHHHHHHcccCCcEEEEEeeccc----ccchHHHHHHHHHHcCCeEEEEEEeeccCCC--Cccccee
Q 047630 313 -----P-TTLLHFLMFDIYRVLRPGGLFWLDHFFCV----GAQLEDVYVPLIESVGFNKLKWVVGRKLDRG--PELREMY 380 (392)
Q Consensus 313 -----~-~~~l~~~L~el~RvLKPGG~lii~~~~~~----~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~--~~~~e~y 380 (392)
+ +..+-.-+.++.+.+||. +|++.....- .....+.+.+.+++.||. +.|.+....+.| .....+|
T Consensus 90 ~~g~~d~r~~L~~~~~r~i~~~~P~-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~-v~~~vl~a~~~GvPQ~R~R~~ 167 (327)
T 2c7p_A 90 QKGFEDSRGTLFFDIARIVREKKPK-VVFMENVKNFASHDNGNTLEVVKNTMNELDYS-FHAKVLNALDYGIPQKRERIY 167 (327)
T ss_dssp CCGGGSTTSCHHHHHHHHHHHHCCS-EEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBC-CEEEEEEGGGGTCSBCCEEEE
T ss_pred cCCCcchhhHHHHHHHHHHHhccCc-EEEEeCcHHHHhccccHHHHHHHHHHHhCCCE-EEEEEEEHHHcCCCccceEEE
Confidence 1 112212233344456784 5556654321 223455688888999997 567777665554 3444566
Q ss_pred eEE
Q 047630 381 LSA 383 (392)
Q Consensus 381 lsa 383 (392)
+.+
T Consensus 168 iv~ 170 (327)
T 2c7p_A 168 MIC 170 (327)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 305
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.54 E-value=0.033 Score=52.99 Aligned_cols=47 Identities=9% Similarity=-0.012 Sum_probs=33.3
Q ss_pred HHHHHHHhh--CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHH
Q 047630 223 FSIDEVLAT--KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNN 274 (392)
Q Consensus 223 ~lI~~ll~l--~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~ 274 (392)
.+++.++.. .+++. |||++||+|..+..+++.|..++|+++| ....+
T Consensus 223 ~l~~~~i~~~~~~~~~---vlD~f~GsGt~~~~a~~~g~~~~g~e~~--~~~~~ 271 (297)
T 2zig_A 223 ELAERLVRMFSFVGDV---VLDPFAGTGTTLIAAARWGRRALGVELV--PRYAQ 271 (297)
T ss_dssp HHHHHHHHHHCCTTCE---EEETTCTTTHHHHHHHHTTCEEEEEESC--HHHHH
T ss_pred HHHHHHHHHhCCCCCE---EEECCCCCCHHHHHHHHcCCeEEEEeCC--HHHHH
Confidence 455555443 23444 4999999999999999999999995554 34444
No 306
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.26 E-value=0.11 Score=50.07 Aligned_cols=82 Identities=21% Similarity=0.239 Sum_probs=52.8
Q ss_pred ccEEEeccCc-CC-CCCCcccEEEEcccccccCC-----------chhHHHHHHHHHHcccCCcEEEEEeecc--ccc--
Q 047630 282 VPLYISISQR-LP-FFDNTLDIVHSMHVLSNWIP-----------TTLLHFLMFDIYRVLRPGGLFWLDHFFC--VGA-- 344 (392)
Q Consensus 282 i~~~~~d~~~-Lp-f~d~sFDlV~s~~~l~~~~~-----------~~~l~~~L~el~RvLKPGG~lii~~~~~--~~~-- 344 (392)
..++++|+.. +. +++++||+|++.-.+..-.+ ...+..++.++.|+|||||.+++..-.. ...
T Consensus 15 ~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~ 94 (323)
T 1boo_A 15 GSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPA 94 (323)
T ss_dssp EEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEE
T ss_pred ceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcc
Confidence 4567777543 33 45789999999855432110 0246678999999999999998864322 111
Q ss_pred ---chHHHHHHHHHHcCCeEEE
Q 047630 345 ---QLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 345 ---~l~~~l~~ll~~aGf~~i~ 363 (392)
.....+.++++++||..+.
T Consensus 95 ~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 95 RSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp ECCHHHHHHHHHHHTTCCEEEE
T ss_pred cccchHHHHHHHHHhCCCEEEE
Confidence 1123455678899997654
No 307
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.70 E-value=0.9 Score=43.88 Aligned_cols=140 Identities=9% Similarity=0.110 Sum_probs=82.2
Q ss_pred EEEEEcCCcchHHHHHHHcCC--EEE--EEecCCCchhHHHHHhc-CCccEEEeccCcCCC---CCCcccEEEEcccccc
Q 047630 239 IGLDIGGGVATFAVRMMERNI--TIV--TTSMNLNGPFNNFIASR-GVVPLYISISQRLPF---FDNTLDIVHSMHVLSN 310 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~--~vv--g~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf---~d~sFDlV~s~~~l~~ 310 (392)
+++|+-||.|.+...+.+.|. +++ + +|++....+....+ +. .++.+|+..+.. +...+|+++....-..
T Consensus 12 ~vidLFaG~GG~~~G~~~aG~~~~~v~~a--~e~d~~a~~ty~~N~~~-~~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~ 88 (327)
T 3qv2_A 12 NVIEFFSGIGGLRSSYERSSININATFIP--FDINEIANKIYSKNFKE-EVQVKNLDSISIKQIESLNCNTWFMSPPCQP 88 (327)
T ss_dssp EEEEETCTTTHHHHHHHHSSCCCCEEEEE--ECCCHHHHHHHHHHHCC-CCBCCCTTTCCHHHHHHTCCCEEEECCCCTT
T ss_pred EEEEECCChhHHHHHHHHcCCCceEEEEE--EECCHHHHHHHHHHCCC-CcccCChhhcCHHHhccCCCCEEEecCCccC
Confidence 359999999999999999884 544 6 45533333322222 22 245677776642 2236899998755443
Q ss_pred c---------CCchhHHHHHHHHHH-ccc-----CCcEEEEEeeccc-ccchHHHHHHHHHHcCCeEEEEEEeeccCCC-
Q 047630 311 W---------IPTTLLHFLMFDIYR-VLR-----PGGLFWLDHFFCV-GAQLEDVYVPLIESVGFNKLKWVVGRKLDRG- 373 (392)
Q Consensus 311 ~---------~~~~~l~~~L~el~R-vLK-----PGG~lii~~~~~~-~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~- 373 (392)
+ ...+....++.++.| +++ | -++++.....- .....+.+.+.+++.||. +.|.+....+.|
T Consensus 89 fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P-~~~~lENV~gl~~~~~~~~i~~~l~~~GY~-v~~~vl~a~~yGv 166 (327)
T 3qv2_A 89 YNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKP-KHIFIENVPLFKESLVFKEIYNILIKNQYY-IKDIICSPIDIGI 166 (327)
T ss_dssp CSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCC-SEEEEEECGGGGGSHHHHHHHHHHHHTTCE-EEEEEECGGGGTC
T ss_pred cccccCCCCCCCccccchhHHHHHHHHHHHhccCC-CEEEEEchhhhcChHHHHHHHHHHHhCCCE-EEEEEEeHHHcCC
Confidence 3 001122246777777 554 4 35555554322 223456688889999997 567777665554
Q ss_pred -CcccceeeEE
Q 047630 374 -PELREMYLSA 383 (392)
Q Consensus 374 -~~~~e~ylsa 383 (392)
.....+|+.+
T Consensus 167 PQ~R~R~fivg 177 (327)
T 3qv2_A 167 PNSRTRYYVMA 177 (327)
T ss_dssp SBCCCEEEEEE
T ss_pred CccceEEEEEE
Confidence 3344555533
No 308
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.53 E-value=0.31 Score=46.83 Aligned_cols=92 Identities=18% Similarity=0.124 Sum_probs=60.3
Q ss_pred hhCCCCcccEEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEccc
Q 047630 230 ATKKPGTIRIGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHV 307 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~ 307 (392)
.+.++.++ |-+|+|. |..+..+++ .|.+|++++ .+....+.+.+.|.-.++ .+...+ . ..+|+|+-.-.
T Consensus 173 ~~~~g~~V---lV~GaG~vG~~a~qla~~~Ga~Vi~~~--~~~~~~~~~~~lGa~~v~-~~~~~~--~-~~~D~vid~~g 243 (348)
T 3two_A 173 KVTKGTKV---GVAGFGGLGSMAVKYAVAMGAEVSVFA--RNEHKKQDALSMGVKHFY-TDPKQC--K-EELDFIISTIP 243 (348)
T ss_dssp TCCTTCEE---EEESCSHHHHHHHHHHHHTTCEEEEEC--SSSTTHHHHHHTTCSEEE-SSGGGC--C-SCEEEEEECCC
T ss_pred CCCCCCEE---EEECCcHHHHHHHHHHHHCCCeEEEEe--CCHHHHHHHHhcCCCeec-CCHHHH--h-cCCCEEEECCC
Confidence 45566666 8889875 778888877 788988854 434566666677743333 333222 1 27999986543
Q ss_pred ccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 308 LSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 308 l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
-. ..+....+.|++||.+++...
T Consensus 244 ~~---------~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 244 TH---------YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp SC---------CCHHHHHTTEEEEEEEEECCC
T ss_pred cH---------HHHHHHHHHHhcCCEEEEECC
Confidence 21 135788899999999987643
No 309
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=92.12 E-value=0.051 Score=65.88 Aligned_cols=95 Identities=13% Similarity=0.066 Sum_probs=37.6
Q ss_pred EEEEEcCCcchHHHHHHHc-C------CEEEEEecCCCchhHHHHHhcC-CccEEEe--ccCc-CCCCCCcccEEEEccc
Q 047630 239 IGLDIGGGVATFAVRMMER-N------ITIVTTSMNLNGPFNNFIASRG-VVPLYIS--ISQR-LPFFDNTLDIVHSMHV 307 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~-g------~~vvg~~iD~~a~~~~~aa~rg-~i~~~~~--d~~~-Lpf~d~sFDlV~s~~~ 307 (392)
.||+||.|+|..+..+.+. + ...+.+|++ +.+.+.+.++- ...+... |.+. -++...+||+|++..+
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s--~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRN--PQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSS--SSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEecCC--hHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 3599999999865544331 1 134444444 33322222210 0112221 2222 1345567999999999
Q ss_pred ccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 308 LSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 308 l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+|.. .++...|.++.+.|||||++++.+
T Consensus 1321 l~~t---~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1321 LATL---GDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp -----------------------CCEEEEEE
T ss_pred cccc---ccHHHHHHHHHHhcCCCcEEEEEe
Confidence 9654 344568999999999999998865
No 310
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=91.70 E-value=1.5 Score=42.33 Aligned_cols=140 Identities=10% Similarity=0.094 Sum_probs=80.2
Q ss_pred EEEEcCCcchHHHHHHHcCC--E-EEEEecCCCchhHHHHHhc-CCccEEEeccCcCCC---CCCcccEEEEcccccccC
Q 047630 240 GLDIGGGVATFAVRMMERNI--T-IVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPF---FDNTLDIVHSMHVLSNWI 312 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g~--~-vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf---~d~sFDlV~s~~~l~~~~ 312 (392)
++|+-||.|.+...+.+.|. + +.+ +|++....+....+ +...++.+|+..+.. +...+|+++....-..+.
T Consensus 6 ~idLFaG~GG~~~G~~~aG~~~~~v~a--~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 6 ILELYSGIGGMHCAWKESGLDGEIVAA--VDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp EEEETCTTTHHHHHHHHHTCSEEEEEE--ECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSE
T ss_pred EEEECcCccHHHHHHHHcCCCceEEEE--EeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchh
Confidence 59999999999999988886 4 345 55533333322222 234567788777642 223689999764433221
Q ss_pred ------C-chhHHHHHHHHHHcc---c-CCcEEEEEeeccc-ccchHHHHHHHHHHcCCeEEEEEEeeccCCC--Ccccc
Q 047630 313 ------P-TTLLHFLMFDIYRVL---R-PGGLFWLDHFFCV-GAQLEDVYVPLIESVGFNKLKWVVGRKLDRG--PELRE 378 (392)
Q Consensus 313 ------~-~~~l~~~L~el~RvL---K-PGG~lii~~~~~~-~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~--~~~~e 378 (392)
. .+....++.++.|++ + | -++++.....- .....+.+.+.+++.||.. .|.+....+.| .....
T Consensus 84 ~ag~~~~~~d~r~~L~~~~~r~i~~~~~P-~~~vlENV~gl~~~~~~~~i~~~l~~~GY~v-~~~vl~a~~~GvPQ~R~R 161 (333)
T 4h0n_A 84 RNGKYLDDNDPRTNSFLYLIGILDQLDNV-DYILMENVKGFENSTVRNLFIDKLKECNFIY-QEFLLCPSTVGVPNSRLR 161 (333)
T ss_dssp ETTEECCTTCTTSCCHHHHHHHGGGCTTC-CEEEEEECTTGGGSHHHHHHHHHHHHTTEEE-EEEEECTTTTTCSCCCCE
T ss_pred hhhhccCCcCcccccHHHHHHHHHHhcCC-CEEEEecchhhhhhhHHHHHHHHHHhCCCeE-EEEEecHHHcCCCccceE
Confidence 0 011112455555554 4 5 34555554322 1223456888899999875 56666655554 34445
Q ss_pred eeeEE
Q 047630 379 MYLSA 383 (392)
Q Consensus 379 ~ylsa 383 (392)
+|+.+
T Consensus 162 ~fiva 166 (333)
T 4h0n_A 162 YYCTA 166 (333)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66544
No 311
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=91.64 E-value=0.26 Score=47.88 Aligned_cols=95 Identities=11% Similarity=0.013 Sum_probs=58.6
Q ss_pred hCCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEeccCcC-----CCCCCcccEE
Q 047630 231 TKKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-----PFFDNTLDIV 302 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-----pf~d~sFDlV 302 (392)
+.++.++ |-+|+|. |..+..+++ .|. .|++++ .+....+.+.+.|.-.++.....++ ...++.+|+|
T Consensus 188 ~~~g~~V---lV~GaG~vG~~a~qlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~v 262 (371)
T 1f8f_A 188 VTPASSF---VTWGAGAVGLSALLAAKVCGASIIIAVD--IVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFA 262 (371)
T ss_dssp CCTTCEE---EEESCSHHHHHHHHHHHHHTCSEEEEEE--SCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEE
T ss_pred CCCCCEE---EEECCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEE
Confidence 4455555 9999886 788888887 677 688754 3345555666666422222211111 1122369999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
+-.-.- ...+.++.+.|++||++++...
T Consensus 263 id~~g~---------~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 263 LESTGS---------PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EECSCC---------HHHHHHHHHTEEEEEEEEECCC
T ss_pred EECCCC---------HHHHHHHHHHHhcCCEEEEeCC
Confidence 865431 1367889999999999977643
No 312
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.43 E-value=1 Score=47.58 Aligned_cols=63 Identities=22% Similarity=0.165 Sum_probs=40.7
Q ss_pred CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEE
Q 047630 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 296 d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
+..+|+++.-..--.-.++---..++..+.++++|||.+...... ..+++.+.++||...+..
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAA-------GFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHTTCEEEEEE
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhCCeEEEecc
Confidence 468999987431111011111246899999999999987543221 347778999999877654
No 313
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=90.54 E-value=0.36 Score=47.27 Aligned_cols=52 Identities=10% Similarity=0.063 Sum_probs=36.7
Q ss_pred EEEEEcCCcchHHHHHHHc--CCEEEEEecCCCchhHHHHHh---cCCccEEEeccCcC
Q 047630 239 IGLDIGGGVATFAVRMMER--NITIVTTSMNLNGPFNNFIAS---RGVVPLYISISQRL 292 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~---rg~i~~~~~d~~~L 292 (392)
.|||||.|.|.++..|++. ...++++.+| ........+ .+.+.++.+|+..+
T Consensus 61 ~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D--~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 61 KVLDLYPGVGIQSAIFYNKYCPRQYSLLEKR--SSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp EEEEESCTTCHHHHHHHHHHCCSEEEEECCC--HHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred EEEEECCCCCHHHHHHHhhCCCCEEEEEecC--HHHHHHHHHhccCCCEEEEECCccch
Confidence 3499999999999999985 5688885544 444443332 34578888887544
No 314
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.41 E-value=1.3 Score=46.69 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=40.8
Q ss_pred CCcccEEEEcccccccCCch-hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEE
Q 047630 296 DNTLDIVHSMHVLSNWIPTT-LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWV 365 (392)
Q Consensus 296 d~sFDlV~s~~~l~~~~~~~-~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~ 365 (392)
+..||+++.-. +..-..++ --..++..++++++|||.+...... ..+++.+.++||...+..
T Consensus 177 ~~~~d~~~~D~-f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 177 NQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA-------GFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp TTCEEEEEECC-SCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHHTCEEEEEE
T ss_pred CCcccEEEECC-CCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhCCeEEEecc
Confidence 46799998742 21111111 1246899999999999998643221 347788999999877654
No 315
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=90.27 E-value=0.91 Score=41.91 Aligned_cols=83 Identities=7% Similarity=-0.014 Sum_probs=50.5
Q ss_pred cEEEeccCcC--CCCCCcccEEEEccccccc----C---Cc----hhHHHHHHHHHHcccCCcEEEEEeecccccchHHH
Q 047630 283 PLYISISQRL--PFFDNTLDIVHSMHVLSNW----I---PT----TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDV 349 (392)
Q Consensus 283 ~~~~~d~~~L--pf~d~sFDlV~s~~~l~~~----~---~~----~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~ 349 (392)
.++++|+... .+++++||+|++.-....- . .. ..+...+.++.|+|+|||.+++... ......
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~----d~~~~~ 81 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNT----PFNCAF 81 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC----HHHHHH
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcC----cHHHHH
Confidence 4566664321 1346789999887544211 0 00 1356788999999999999988741 111233
Q ss_pred HHHHHHHcCCeEEEEEEeec
Q 047630 350 YVPLIESVGFNKLKWVVGRK 369 (392)
Q Consensus 350 l~~ll~~aGf~~i~w~~~~k 369 (392)
+..++.+.||....+.+..|
T Consensus 82 ~~~~~~~~gf~~~~~iiW~K 101 (260)
T 1g60_A 82 ICQYLVSKGMIFQNWITWDK 101 (260)
T ss_dssp HHHHHHHTTCEEEEEEEECC
T ss_pred HHHHHHhhccceeEEEEEEe
Confidence 56678888997765444333
No 316
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=89.87 E-value=0.58 Score=45.91 Aligned_cols=104 Identities=11% Similarity=0.029 Sum_probs=60.7
Q ss_pred HhhCCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEeccCcC------CC-CCCc
Q 047630 229 LATKKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISISQRL------PF-FDNT 298 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L------pf-~d~s 298 (392)
..+.++.+| |-+|+|. |.++..+++ .|. .|++++ .+....+.+.+.|. ..+.....++ .. ....
T Consensus 181 ~~~~~g~~V---lV~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa-~~i~~~~~~~~~~~~~~~~~g~g 254 (398)
T 2dph_A 181 AGVKPGSHV---YIAGAGPVGRCAAAGARLLGAACVIVGD--QNPERLKLLSDAGF-ETIDLRNSAPLRDQIDQILGKPE 254 (398)
T ss_dssp TTCCTTCEE---EEECCSHHHHHHHHHHHHHTCSEEEEEE--SCHHHHHHHHTTTC-EEEETTSSSCHHHHHHHHHSSSC
T ss_pred cCCCCCCEE---EEECCCHHHHHHHHHHHHcCCCEEEEEc--CCHHHHHHHHHcCC-cEEcCCCcchHHHHHHHHhCCCC
Confidence 345566666 9999986 888888887 688 888855 43455556666664 4332211111 00 1236
Q ss_pred ccEEEEcccccccCC-c----hhHHHHHHHHHHcccCCcEEEEEe
Q 047630 299 LDIVHSMHVLSNWIP-T----TLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 299 FDlV~s~~~l~~~~~-~----~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
||+|+-.-.-..... . ......+.++.+.|++||++++..
T Consensus 255 ~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 255 VDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 999986543211000 0 000136788999999999997553
No 317
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=89.49 E-value=0.8 Score=43.98 Aligned_cols=97 Identities=12% Similarity=0.037 Sum_probs=59.5
Q ss_pred HHhhCCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEeccCcC-----C-CCCCc
Q 047630 228 VLATKKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-----P-FFDNT 298 (392)
Q Consensus 228 ll~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-----p-f~d~s 298 (392)
...+.++.++ |=+|+|. |.++..+++ .|. .|++ ++.+....+.+.+.|...++.....++ . .....
T Consensus 161 ~~~~~~g~~V---lV~GaG~vG~~a~qla~~~Ga~~Vi~--~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g 235 (352)
T 3fpc_A 161 LANIKLGDTV---CVIGIGPVGLMSVAGANHLGAGRIFA--VGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKG 235 (352)
T ss_dssp HTTCCTTCCE---EEECCSHHHHHHHHHHHTTTCSSEEE--ECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCC
T ss_pred hcCCCCCCEE---EEECCCHHHHHHHHHHHHcCCcEEEE--ECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCC
Confidence 3445666666 8888875 778888887 677 6888 444344455666666422322211111 0 12336
Q ss_pred ccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 299 LDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+|+|+-.-.- . ..+.++.+.|++||.++...
T Consensus 236 ~D~v~d~~g~------~---~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 236 VDKVVIAGGD------V---HTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEEEECSSC------T---THHHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCCC------h---HHHHHHHHHHhcCCEEEEec
Confidence 9999864322 1 25788899999999997553
No 318
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=89.47 E-value=0.92 Score=43.68 Aligned_cols=96 Identities=13% Similarity=0.028 Sum_probs=58.8
Q ss_pred HhhCCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEec---cCc----C-CCCCC
Q 047630 229 LATKKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISI---SQR----L-PFFDN 297 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d---~~~----L-pf~d~ 297 (392)
..+.++.++ |-+|+|. |.++..+++ .|. .|++++ .+....+.+.+.|.-..+... ..+ + ....+
T Consensus 167 ~~~~~g~~V---lV~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~ 241 (356)
T 1pl8_A 167 GGVTLGHKV---LVCGAGPIGMVTLLVAKAMGAAQVVVTD--LSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGC 241 (356)
T ss_dssp HTCCTTCEE---EEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTS
T ss_pred cCCCCCCEE---EEECCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCC
Confidence 345566666 8899875 778888887 688 888855 334445566666642222211 011 1 00114
Q ss_pred cccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 298 TLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 298 sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
.+|+|+-.-.- . ..+.+..++|++||++++..
T Consensus 242 g~D~vid~~g~------~---~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 242 KPEVTIECTGA------E---ASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp CCSEEEECSCC------H---HHHHHHHHHSCTTCEEEECS
T ss_pred CCCEEEECCCC------h---HHHHHHHHHhcCCCEEEEEe
Confidence 68999865331 1 25688889999999997654
No 319
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.40 E-value=1 Score=43.76 Aligned_cols=98 Identities=14% Similarity=0.185 Sum_probs=60.6
Q ss_pred HHhhCCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEeccCcC--------CCCC
Q 047630 228 VLATKKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISISQRL--------PFFD 296 (392)
Q Consensus 228 ll~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L--------pf~d 296 (392)
...+.++.++ |=+|+|. |.++..+++ .|. .|+++ +.+....+.+.+.|....+.....++ ....
T Consensus 177 ~~~~~~g~~V---lV~GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~ 251 (370)
T 4ej6_A 177 LSGIKAGSTV---AILGGGVIGLLTVQLARLAGATTVILS--TRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVP 251 (370)
T ss_dssp HHTCCTTCEE---EEECCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSST
T ss_pred hcCCCCCCEE---EEECCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccC
Confidence 3456666666 7788865 778888877 687 78774 44345555566666422322111110 1223
Q ss_pred CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
+.+|+|+-.-.- ...+.++.+.|++||.+++...
T Consensus 252 gg~Dvvid~~G~---------~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 252 GGVDVVIECAGV---------AETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TCEEEEEECSCC---------HHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCEEEECCCC---------HHHHHHHHHHhccCCEEEEEec
Confidence 479999864321 1367889999999999987653
No 320
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.23 E-value=0.5 Score=43.70 Aligned_cols=42 Identities=19% Similarity=0.133 Sum_probs=30.8
Q ss_pred HHHHHHHhh--CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecC
Q 047630 223 FSIDEVLAT--KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMN 267 (392)
Q Consensus 223 ~lI~~ll~l--~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD 267 (392)
.+++.++.. .+++. |||..||+|..+....+.|..++|++++
T Consensus 200 ~l~~~~i~~~~~~~~~---vlD~f~GsGtt~~~a~~~gr~~ig~e~~ 243 (260)
T 1g60_A 200 DLIERIIRASSNPNDL---VLDCFMGSGTTAIVAKKLGRNFIGCDMN 243 (260)
T ss_dssp HHHHHHHHHHCCTTCE---EEESSCTTCHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHhCCCCCE---EEECCCCCCHHHHHHHHcCCeEEEEeCC
Confidence 344444432 33444 5999999999999999999999996554
No 321
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=89.06 E-value=1.3 Score=42.36 Aligned_cols=96 Identities=14% Similarity=0.038 Sum_probs=58.1
Q ss_pred HhhCCCCcccEEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEecc-CcCC------CC---C
Q 047630 229 LATKKPGTIRIGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISIS-QRLP------FF---D 296 (392)
Q Consensus 229 l~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~-~~Lp------f~---d 296 (392)
..+.++.++ |-+|+|. |..+..+++ .|..|++++ .+....+.+.+.|.-..+.... .++. .. .
T Consensus 164 ~~~~~g~~V---lV~GaG~vG~~a~qla~~~Ga~Vi~~~--~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 164 AGVQLGTTV---LVIGAGPIGLVSVLAAKAYGAFVVCTA--RSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp HTCCTTCEE---EEECCSHHHHHHHHHHHHTTCEEEEEE--SCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSS
T ss_pred cCCCCCCEE---EEECCCHHHHHHHHHHHHcCCEEEEEc--CCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccC
Confidence 345566666 8899875 777777777 788887754 3344445555666422222111 1110 01 2
Q ss_pred CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
..+|+|+-.-.- . ..+.+..+.|++||.++...
T Consensus 239 ~g~D~vid~~g~------~---~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 239 DLPNVTIDCSGN------E---KCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SCCSEEEECSCC------H---HHHHHHHHHSCTTCEEEECS
T ss_pred CCCCEEEECCCC------H---HHHHHHHHHHhcCCEEEEEe
Confidence 468999865431 1 25688889999999997654
No 322
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=88.31 E-value=0.55 Score=40.94 Aligned_cols=92 Identities=20% Similarity=0.115 Sum_probs=53.4
Q ss_pred hCCCCcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC--------CCCCcc
Q 047630 231 TKKPGTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP--------FFDNTL 299 (392)
Q Consensus 231 l~~~~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp--------f~d~sF 299 (392)
+.++..+ |.+|+ |.|..+..++. .|.+|++++.+ ....+.+.+.|. .... +..... .....+
T Consensus 36 ~~~g~~v---lV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~--~~~~~~~~~~g~-~~~~-d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 36 LSPGERV---LIHSATGGVGMAAVSIAKMIGARIYTTAGS--DAKREMLSRLGV-EYVG-DSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CCTTCEE---EETTTTSHHHHHHHHHHHHHTCEEEEEESS--HHHHHHHHTTCC-SEEE-ETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCCEE---EEeeCCChHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHcCC-CEEe-eCCcHHHHHHHHHHhCCCCC
Confidence 3444444 99994 45666655554 78898885532 334444444453 2222 211110 112469
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
|+|+.+-. . ..+.++.+.|++||++++...
T Consensus 109 D~vi~~~g-------~---~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 109 DVVLNSLA-------G---EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEEEECCC-------T---HHHHHHHHTEEEEEEEEECSC
T ss_pred eEEEECCc-------h---HHHHHHHHHhccCCEEEEEcC
Confidence 99986532 1 257888999999999977643
No 323
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=87.86 E-value=7.5 Score=36.72 Aligned_cols=138 Identities=11% Similarity=0.016 Sum_probs=80.7
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----CCccEEEeccCc-C---
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----GVVPLYISISQR-L--- 292 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g~i~~~~~d~~~-L--- 292 (392)
...+++.+..+. ++.+ ||+=+|+|.++..+.+.+..++.++ .+......+.++ ..+.++..|... +
T Consensus 80 l~~yf~~l~~~n-~~~~---LDlfaGSGaLgiEaLS~~d~~vfvE--~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l 153 (283)
T 2oo3_A 80 FLEYISVIKQIN-LNST---LSYYPGSPYFAINQLRSQDRLYLCE--LHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNAL 153 (283)
T ss_dssp GHHHHHHHHHHS-SSSS---CCEEECHHHHHHHHSCTTSEEEEEC--CSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCCc---eeEeCCcHHHHHHHcCCCCeEEEEe--CCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHh
Confidence 455555555443 3566 9999999999999999887888844 422333322222 235666666432 2
Q ss_pred CCCCCcccEEEEcccccccCCchhHHHHHHHHHH--cccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEee
Q 047630 293 PFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYR--VLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVGR 368 (392)
Q Consensus 293 pf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~R--vLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~~ 368 (392)
.-+...||+|+.--.+.. ....+.++..+.+ .+.|+|++++==......... .+.+.+++.|.+.++.+..-
T Consensus 154 ~~~~~~fdLVfiDPPYe~---k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~-~~~~~l~~~~~~~l~~el~~ 227 (283)
T 2oo3_A 154 LPPPEKRGLIFIDPSYER---KEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTE-QFLRKMREISSKSVRIELHL 227 (283)
T ss_dssp CSCTTSCEEEEECCCCCS---TTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHH-HHHHHHHHHCSSEEEEEEEC
T ss_pred cCCCCCccEEEECCCCCC---CcHHHHHHHHHHHhCccCCCeEEEEEEeccchHHHH-HHHHHHHhcCCCeEEEEEEe
Confidence 123457999998776542 1344556665555 456888775433333333333 46666777776555544443
No 324
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.83 E-value=0.8 Score=44.53 Aligned_cols=92 Identities=11% Similarity=0.079 Sum_probs=57.3
Q ss_pred hhCCCCcccEEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEec----cCcCCCCCCcccEEE
Q 047630 230 ATKKPGTIRIGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISI----SQRLPFFDNTLDIVH 303 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d----~~~Lpf~d~sFDlV~ 303 (392)
.+.++.++ |-+|+|. |..+..+++ .|..|++++. +....+.+.+.|...++... .+.+. +.+|+|+
T Consensus 191 ~~~~g~~V---lV~GaG~vG~~aiqlak~~Ga~Vi~~~~--~~~~~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvi 262 (369)
T 1uuf_A 191 QAGPGKKV---GVVGIGGLGHMGIKLAHAMGAHVVAFTT--SEAKREAAKALGADEVVNSRNADEMAAHL---KSFDFIL 262 (369)
T ss_dssp TCCTTCEE---EEECCSHHHHHHHHHHHHTTCEEEEEES--SGGGHHHHHHHTCSEEEETTCHHHHHTTT---TCEEEEE
T ss_pred CCCCCCEE---EEECCCHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHcCCcEEeccccHHHHHHhh---cCCCEEE
Confidence 45566655 8899875 778888877 7888888553 34555556566642222211 11221 4699998
Q ss_pred EcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 304 SMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 304 s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
-.-.-. ..+.+..+.|++||.++...
T Consensus 263 d~~g~~---------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 263 NTVAAP---------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp ECCSSC---------CCHHHHHTTEEEEEEEEECC
T ss_pred ECCCCH---------HHHHHHHHHhccCCEEEEec
Confidence 654321 13577889999999987643
No 325
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=87.81 E-value=1.7 Score=41.65 Aligned_cols=80 Identities=13% Similarity=0.108 Sum_probs=47.7
Q ss_pred cEE-EeccCc-C-CCCCCcccEEEEcccccc----cC-C---chhHHHHHHHHHHcccCCcEEEEEeecccc-----cch
Q 047630 283 PLY-ISISQR-L-PFFDNTLDIVHSMHVLSN----WI-P---TTLLHFLMFDIYRVLRPGGLFWLDHFFCVG-----AQL 346 (392)
Q Consensus 283 ~~~-~~d~~~-L-pf~d~sFDlV~s~~~l~~----~~-~---~~~l~~~L~el~RvLKPGG~lii~~~~~~~-----~~l 346 (392)
.++ ++|+.. + .+++++||+|++.-.... |. . ...+...|.++.|+|+|||.+++..-.... ..+
T Consensus 40 ~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~~~l 119 (319)
T 1eg2_A 40 HVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGSGDL 119 (319)
T ss_dssp EEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTTBCCH
T ss_pred eEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcccccccccccH
Confidence 445 666432 1 234678888888754421 10 0 113567888999999999999887533222 122
Q ss_pred HHHHHHHHHHcC-CeEEE
Q 047630 347 EDVYVPLIESVG-FNKLK 363 (392)
Q Consensus 347 ~~~l~~ll~~aG-f~~i~ 363 (392)
..+..++...| |..+.
T Consensus 120 -~~l~~~i~~~G~~~~~~ 136 (319)
T 1eg2_A 120 -ISIISHMRQNSKMLLAN 136 (319)
T ss_dssp -HHHHHHHHHHCCCEEEE
T ss_pred -HHHHHHHhCcccceeEE
Confidence 33556667777 86654
No 326
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=87.79 E-value=0.87 Score=43.45 Aligned_cols=95 Identities=14% Similarity=0.030 Sum_probs=58.2
Q ss_pred hhCCCCcccEEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC----CCCCcccEEE
Q 047630 230 ATKKPGTIRIGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP----FFDNTLDIVH 303 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp----f~d~sFDlV~ 303 (392)
.+.++.++ |-+|+|. |..+..+++ .|.+|++++ .+....+.+.+.|.-..+.....++. -..+.+|+|+
T Consensus 163 ~~~~g~~V---lV~GaG~vG~~a~qla~~~Ga~Vi~~~--~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vi 237 (340)
T 3s2e_A 163 DTRPGQWV---VISGIGGLGHVAVQYARAMGLRVAAVD--IDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVL 237 (340)
T ss_dssp TCCTTSEE---EEECCSTTHHHHHHHHHHTTCEEEEEE--SCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred CCCCCCEE---EEECCCHHHHHHHHHHHHCCCeEEEEe--CCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEE
Confidence 34555555 7799875 888888887 789998855 43455556666664222222111110 0113588887
Q ss_pred EcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 304 SMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 304 s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
-...- ...+..+.+.|++||.+++..
T Consensus 238 d~~g~---------~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 238 VTAVS---------PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp ESSCC---------HHHHHHHHHHEEEEEEEEECS
T ss_pred EeCCC---------HHHHHHHHHHhccCCEEEEeC
Confidence 54321 136788999999999997654
No 327
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=86.18 E-value=1.6 Score=42.35 Aligned_cols=95 Identities=11% Similarity=0.037 Sum_probs=58.4
Q ss_pred hhCCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEec--cCcC-----CCCCCcc
Q 047630 230 ATKKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISI--SQRL-----PFFDNTL 299 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d--~~~L-----pf~d~sF 299 (392)
.+.++.+| |=+|+|. |.++..+++ .|. .|+++ +.+....+.+.+.|.-.++... ...+ ...++.+
T Consensus 190 ~~~~g~~V---lV~GaG~vG~~a~q~a~~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 190 KVEPGSNV---AIFGLGTVGLAVAEGAKTAGASRIIGI--DIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp CCCTTCCE---EEECCSHHHHHHHHHHHHHTCSCEEEE--CSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCCCEE---EEECCCHHHHHHHHHHHHcCCCeEEEE--cCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCC
Confidence 34455666 8889874 778888877 687 78884 4434555666666642222211 1111 1123479
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCC-cEEEEEe
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPG-GLFWLDH 338 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPG-G~lii~~ 338 (392)
|+|+-.-.- ...+....+.|++| |++++..
T Consensus 265 D~vid~~g~---------~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 265 DYSFECIGN---------VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SEEEECSCC---------HHHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECCCC---------HHHHHHHHHHhhccCCEEEEEc
Confidence 999865331 13678899999997 9987654
No 328
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=85.94 E-value=5.8 Score=37.78 Aligned_cols=100 Identities=14% Similarity=0.009 Sum_probs=63.1
Q ss_pred ccEEEEEcCCcchHHHHHHH-cCCEEEEEecCCCchhHH----HHHh-----cCCccEEEeccCcCC---------CCCC
Q 047630 237 IRIGLDIGGGVATFAVRMME-RNITIVTTSMNLNGPFNN----FIAS-----RGVVPLYISISQRLP---------FFDN 297 (392)
Q Consensus 237 ir~VLDIGCGtG~~a~~La~-~g~~vvg~~iD~~a~~~~----~aa~-----rg~i~~~~~d~~~Lp---------f~d~ 297 (392)
++.|+++|||-=..+.++.. .+..++- +|. +...+ ...+ .+...++..|..+ . |...
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~e--vD~-P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYE--IDQ-PKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPS 178 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEE--EEC-HHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTT
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEE--cCC-HHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCC
Confidence 45569999999888877773 3456655 554 33332 2221 1223455566554 2 1112
Q ss_pred cccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc
Q 047630 298 TLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 298 sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~ 341 (392)
.-=++++-.++++ .+++....+++.+...+.||+.++++....
T Consensus 179 ~Pt~~i~Egvl~Y-l~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 179 ARTAWLAEGLLMY-LPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp SCEEEEECSCGGG-SCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CCEEEEEechHhh-CCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 2335556666655 566788899999999999999999987643
No 329
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=85.73 E-value=2.3 Score=41.06 Aligned_cols=94 Identities=10% Similarity=-0.003 Sum_probs=56.8
Q ss_pred hCCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEecc--CcC-----CCCCCccc
Q 047630 231 TKKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISIS--QRL-----PFFDNTLD 300 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~--~~L-----pf~d~sFD 300 (392)
+.++.++ |-+|+|. |..+..+++ .|. .|+++ +.+....+.+.+.|.-.++.... .++ ...++.+|
T Consensus 189 ~~~g~~V---lV~GaG~vG~~a~qla~~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D 263 (374)
T 2jhf_A 189 VTQGSTC---AVFGLGGVGLSVIMGCKAAGAARIIGV--DINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVD 263 (374)
T ss_dssp CCTTCEE---EEECCSHHHHHHHHHHHHTTCSEEEEE--CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCCCEE---EEECCCHHHHHHHHHHHHcCCCeEEEE--cCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCc
Confidence 4455555 8889765 777777777 687 78884 44345556666666422221111 111 01124699
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCC-cEEEEEe
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPG-GLFWLDH 338 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPG-G~lii~~ 338 (392)
+|+-.-.- ...+.+..+.|++| |.+++..
T Consensus 264 ~vid~~g~---------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 264 FSFEVIGR---------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp EEEECSCC---------HHHHHHHHHHBCTTTCEEEECS
T ss_pred EEEECCCC---------HHHHHHHHHHhhcCCcEEEEec
Confidence 99865321 13578889999999 9997654
No 330
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=85.67 E-value=2.4 Score=40.96 Aligned_cols=95 Identities=11% Similarity=-0.054 Sum_probs=57.9
Q ss_pred hhCCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEecc--CcC-----CCCCCcc
Q 047630 230 ATKKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISIS--QRL-----PFFDNTL 299 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~--~~L-----pf~d~sF 299 (392)
.+.++.+| |-+|+|. |.++..+++ .|. .|++++ .+....+.+.+.|.-.++.... .++ ....+.+
T Consensus 188 ~~~~g~~V---lV~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 188 KVTPGSTC---AVFGLGGVGFSAIVGCKAAGASRIIGVG--THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp CCCTTCEE---EEECCSHHHHHHHHHHHHHTCSEEEEEC--SCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCCCEE---EEECCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCC
Confidence 34455555 8889875 777888877 687 788844 4345556666666422222111 111 1112369
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCC-cEEEEEe
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPG-GLFWLDH 338 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPG-G~lii~~ 338 (392)
|+|+-.-.- ...+.+..+.|++| |.+++..
T Consensus 263 Dvvid~~g~---------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 263 DYAVECAGR---------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SEEEECSCC---------HHHHHHHHHTBCTTTCEEEECC
T ss_pred CEEEECCCC---------HHHHHHHHHHHhcCCCEEEEEc
Confidence 999864321 13678889999999 9997654
No 331
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=85.65 E-value=0.98 Score=43.13 Aligned_cols=94 Identities=13% Similarity=0.080 Sum_probs=55.7
Q ss_pred hCCCCcccEEEEEcCC--cchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC-----C-CCCCcccE
Q 047630 231 TKKPGTIRIGLDIGGG--VATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-----P-FFDNTLDI 301 (392)
Q Consensus 231 l~~~~~ir~VLDIGCG--tG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-----p-f~d~sFDl 301 (392)
+.++.++ |-+|+| .|..+..+++ .|.+|++++.+ ....+.+.+.|.-..+.....++ . .....+|+
T Consensus 142 ~~~g~~V---lV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~--~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 142 LQRNDVL---LVNACGSAIGHLFAQLSQILNFRLIAVTRN--NKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADA 216 (340)
T ss_dssp CCTTCEE---EESSTTSHHHHHHHHHHHHHTCEEEEEESS--STTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred cCCCCEE---EEeCCccHHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcE
Confidence 4455555 999987 5777777776 78999886644 34555555556322222111111 0 12346999
Q ss_pred EEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 302 VHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 302 V~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
|+.+-.- . .+.+..+.|++||.+++...
T Consensus 217 vid~~g~------~----~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 217 AIDSIGG------P----DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEESSCH------H----HHHHHHHTEEEEEEEEECCC
T ss_pred EEECCCC------h----hHHHHHHHhcCCCEEEEEee
Confidence 9865432 1 22445589999999987643
No 332
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=85.60 E-value=2.5 Score=40.78 Aligned_cols=94 Identities=15% Similarity=0.021 Sum_probs=56.7
Q ss_pred hCCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEecc--CcC-----CCCCCccc
Q 047630 231 TKKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISIS--QRL-----PFFDNTLD 300 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~--~~L-----pf~d~sFD 300 (392)
+.+++++ |-+|+|. |..+..+++ .|. .|++++ .+....+.+.+.|.-.++.... .++ ....+.+|
T Consensus 190 ~~~g~~V---lV~GaG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D 264 (374)
T 1cdo_A 190 VEPGSTC---AVFGLGAVGLAAVMGCHSAGAKRIIAVD--LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVD 264 (374)
T ss_dssp CCTTCEE---EEECCSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CCCCCEE---EEECCCHHHHHHHHHHHHcCCCEEEEEc--CCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCC
Confidence 4455555 8889765 777777777 687 788844 4345556666666422221111 111 01123699
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCC-cEEEEEe
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPG-GLFWLDH 338 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPG-G~lii~~ 338 (392)
+|+-.-.- ...+....+.|++| |.+++..
T Consensus 265 ~vid~~g~---------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 265 FSLECVGN---------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp EEEECSCC---------HHHHHHHHHTBCTTTCEEEECS
T ss_pred EEEECCCC---------HHHHHHHHHHhhcCCcEEEEEc
Confidence 99864321 13678889999999 9997654
No 333
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=85.08 E-value=1.1 Score=43.21 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=57.3
Q ss_pred hCCCCcccEEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC------CCCCcccEE
Q 047630 231 TKKPGTIRIGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP------FFDNTLDIV 302 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp------f~d~sFDlV 302 (392)
+.++.++ |-+|+|. |..+..+++ .|..|++++ .+....+.+.+.|.-..+..+..++. .....+|+|
T Consensus 187 ~~~g~~V---lV~G~G~vG~~a~qla~~~Ga~Vi~~~--~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 187 LRAGDRV---VVQGTGGVALFGLQIAKATGAEVIVTS--SSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp CCTTCEE---EEESSBHHHHHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCCCEE---EEECCCHHHHHHHHHHHHcCCEEEEEe--cCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEE
Confidence 4455555 8889765 777777777 788998855 33345555666664223321111110 123369999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
+-.-.- . .+....+.|++||.+++...
T Consensus 262 id~~g~------~----~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 262 LEIAGG------A----GLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp EEETTS------S----CHHHHHHHEEEEEEEEEECC
T ss_pred EECCCh------H----HHHHHHHHhhcCCEEEEEec
Confidence 865431 1 35778899999999977643
No 334
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=84.49 E-value=2.6 Score=40.55 Aligned_cols=94 Identities=11% Similarity=-0.014 Sum_probs=56.8
Q ss_pred hCCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEecc--CcC-----CCCCCccc
Q 047630 231 TKKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISIS--QRL-----PFFDNTLD 300 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~--~~L-----pf~d~sFD 300 (392)
+.++.++ |-+|+|. |.++..+++ .|. .|++++ .+....+.+.+.|...++.... .++ ....+.+|
T Consensus 188 ~~~g~~V---lV~GaG~vG~~avqla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D 262 (373)
T 2fzw_A 188 LEPGSVC---AVFGLGGVGLAVIMGCKVAGASRIIGVD--INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVD 262 (373)
T ss_dssp CCTTCEE---EEECCSHHHHHHHHHHHHHTCSEEEEEC--SCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCCCEE---EEECCCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCC
Confidence 4455555 8889765 777777777 687 788844 4345555666666422221111 111 01123699
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCC-cEEEEEe
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPG-GLFWLDH 338 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPG-G~lii~~ 338 (392)
+|+-.-.- ...+.++.+.|++| |.+++..
T Consensus 263 ~vid~~g~---------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 263 YSFECIGN---------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp EEEECSCC---------HHHHHHHHHTBCTTTCEEEECS
T ss_pred EEEECCCc---------HHHHHHHHHhhccCCcEEEEEe
Confidence 99865331 13578889999999 9997654
No 335
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=84.45 E-value=0.86 Score=42.95 Aligned_cols=87 Identities=14% Similarity=0.112 Sum_probs=54.0
Q ss_pred hCCCCcccEEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccc
Q 047630 231 TKKPGTIRIGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVL 308 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l 308 (392)
+.++.++ |=+|+|. |.++..+++ .|.+|++++ + ....+.+.+.|. ..+..|.+.+ .+.+|+|+-.-.-
T Consensus 140 ~~~g~~V---lV~GaG~vG~~a~qlak~~Ga~Vi~~~-~--~~~~~~~~~lGa-~~v~~d~~~v---~~g~Dvv~d~~g~ 209 (315)
T 3goh_A 140 LTKQREV---LIVGFGAVNNLLTQMLNNAGYVVDLVS-A--SLSQALAAKRGV-RHLYREPSQV---TQKYFAIFDAVNS 209 (315)
T ss_dssp CCSCCEE---EEECCSHHHHHHHHHHHHHTCEEEEEC-S--SCCHHHHHHHTE-EEEESSGGGC---CSCEEEEECC---
T ss_pred CCCCCEE---EEECCCHHHHHHHHHHHHcCCEEEEEE-C--hhhHHHHHHcCC-CEEEcCHHHh---CCCccEEEECCCc
Confidence 3445555 8899863 778888887 688998865 3 455566666663 2222233333 5679998854321
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
. .+.+..+.|++||+++..
T Consensus 210 ------~----~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 210 ------Q----NAAALVPSLKANGHIICI 228 (315)
T ss_dssp --------------TTGGGEEEEEEEEEE
T ss_pred ------h----hHHHHHHHhcCCCEEEEE
Confidence 1 225677999999998765
No 336
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=83.56 E-value=3.5 Score=39.77 Aligned_cols=94 Identities=12% Similarity=-0.009 Sum_probs=56.6
Q ss_pred hCCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEecc--CcC-----CCCCCccc
Q 047630 231 TKKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISIS--QRL-----PFFDNTLD 300 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~--~~L-----pf~d~sFD 300 (392)
+.++.+| |-+|+|. |.++..+++ .|. .|++++ .+....+.+.+.|.-..+.... .++ ....+.+|
T Consensus 193 ~~~g~~V---lV~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D 267 (376)
T 1e3i_A 193 VTPGSTC---AVFGLGCVGLSAIIGCKIAGASRIIAID--INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVD 267 (376)
T ss_dssp CCTTCEE---EEECCSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CCCCCEE---EEECCCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCcc
Confidence 4455555 8889864 777888877 687 788844 4345556666666422221111 111 01123699
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCC-cEEEEEe
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPG-GLFWLDH 338 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPG-G~lii~~ 338 (392)
+|+-.-.- ...+.+..+.|++| |.+++..
T Consensus 268 vvid~~G~---------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 268 YSLDCAGT---------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp EEEESSCC---------HHHHHHHHHTBCTTTCEEEECC
T ss_pred EEEECCCC---------HHHHHHHHHHhhcCCCEEEEEC
Confidence 99864321 13678899999999 9997653
No 337
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=83.36 E-value=5.9 Score=37.64 Aligned_cols=85 Identities=14% Similarity=0.056 Sum_probs=52.3
Q ss_pred CCcccEEEEcccc----ccc---CCch-hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEEEEe
Q 047630 296 DNTLDIVHSMHVL----SNW---IPTT-LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKWVVG 367 (392)
Q Consensus 296 d~sFDlV~s~~~l----~~~---~~~~-~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w~~~ 367 (392)
.+.+|+|++..+- |+. .|.. .+..++..+.++|+|||.|++..|...+... +.+...+++. |+.++-..-
T Consensus 204 ~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr~s-e~lv~~LaR~-F~~Vr~vKP 281 (320)
T 2hwk_A 204 VPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADRAS-ESIIGAIARQ-FKFSRVCKP 281 (320)
T ss_dssp SCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSHHH-HHHHHHHHTT-EEEEEEECC
T ss_pred cCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcccH-HHHHHHHHHh-cceeeeeCC
Confidence 3679999987443 221 1111 1233667778999999999999876653333 3355566664 888776522
Q ss_pred eccCCCCcccceeeEEEE
Q 047630 368 RKLDRGPELREMYLSALL 385 (392)
Q Consensus 368 ~k~d~~~~~~e~ylsai~ 385 (392)
.......|+|+.+.-
T Consensus 282 ---~ASR~StEvf~La~g 296 (320)
T 2hwk_A 282 ---KSSLEETEVLFVFIG 296 (320)
T ss_dssp ---TTCCSTTCEEEEEEE
T ss_pred ---CCccccceEEEEEEe
Confidence 222236788875543
No 338
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=83.35 E-value=4 Score=39.67 Aligned_cols=100 Identities=11% Similarity=0.072 Sum_probs=59.9
Q ss_pred hhCCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEeccCc-----C-CC-CCCcc
Q 047630 230 ATKKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISISQR-----L-PF-FDNTL 299 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~-----L-pf-~d~sF 299 (392)
.+.++.+| |-+|+|. |.++..+++ .|. .|++++ .+....+.+.+.|. ..+...... + .. ....+
T Consensus 182 ~~~~g~~V---lV~GaG~vG~~aiqlAk~~Ga~~Vi~~~--~~~~~~~~a~~lGa-~~i~~~~~~~~~~~v~~~t~g~g~ 255 (398)
T 1kol_A 182 GVGPGSTV---YVAGAGPVGLAAAASARLLGAAVVIVGD--LNPARLAHAKAQGF-EIADLSLDTPLHEQIAALLGEPEV 255 (398)
T ss_dssp TCCTTCEE---EEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTC-EEEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCCCEE---EEECCcHHHHHHHHHHHHCCCCeEEEEc--CCHHHHHHHHHcCC-cEEccCCcchHHHHHHHHhCCCCC
Confidence 45555555 8899876 788888887 677 677744 43455556666674 332211111 0 00 12369
Q ss_pred cEEEEccccc---------ccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 300 DIVHSMHVLS---------NWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 300 DlV~s~~~l~---------~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
|+|+-.-.-. +..++ ...+.+..++|++||.+++..
T Consensus 256 Dvvid~~G~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 256 DCAVDAVGFEARGHGHEGAKHEAP---ATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEEECCCTTCBCSSTTGGGSBCT---THHHHHHHHHEEEEEEEEECS
T ss_pred CEEEECCCCcccccccccccccch---HHHHHHHHHHHhcCCEEEEec
Confidence 9998654321 11111 136788999999999997654
No 339
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=83.29 E-value=1.2 Score=42.19 Aligned_cols=94 Identities=12% Similarity=0.034 Sum_probs=56.2
Q ss_pred hhCCCCcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHH-HhcCCccEEEeccCcC-----CCCCCccc
Q 047630 230 ATKKPGTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFI-ASRGVVPLYISISQRL-----PFFDNTLD 300 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~a-a~rg~i~~~~~d~~~L-----pf~d~sFD 300 (392)
.+.++.++ |-+|+ |.|..+..+++ .|.+|++++ .+....+.+ .+.|....+.....++ ....+.+|
T Consensus 146 ~~~~g~~v---lI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 146 QPKNGETV---VISGAAGAVGSVAGQIARLKGCRVVGIA--GGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp CCCTTCEE---EESSTTSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCCCEE---EEECCCCHHHHHHHHHHHHCCCEEEEEe--CCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCce
Confidence 34555555 99998 45777777766 788998855 323444455 4445322222111111 00134699
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+|+.+-.- ..+....+.|++||.+++..
T Consensus 221 ~vi~~~g~----------~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 221 VFFDNVGG----------EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp EEEESSCH----------HHHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCc----------chHHHHHHHHhhCCEEEEEe
Confidence 98864431 25788889999999998754
No 340
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=83.21 E-value=11 Score=38.25 Aligned_cols=122 Identities=11% Similarity=0.121 Sum_probs=68.6
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc----CCccEEEeccCcCCCC-----------------CC
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR----GVVPLYISISQRLPFF-----------------DN 297 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r----g~i~~~~~d~~~Lpf~-----------------d~ 297 (392)
+++|+-||.|.+...+.+.|.+++. .+|++....+....+ ....++.+|+..+... -.
T Consensus 90 ~viDLFaG~GGlslG~~~aG~~~v~-avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~~~ 168 (482)
T 3me5_A 90 RFIDLFAGIGGIRRGFESIGGQCVF-TSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHIP 168 (482)
T ss_dssp EEEEESCTTSHHHHHHHTTTEEEEE-EECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHHHSC
T ss_pred eEEEecCCccHHHHHHHHCCCEEEE-EEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhhcCC
Confidence 4599999999999999998887542 355533333322222 1235667776654311 13
Q ss_pred cccEEEEcccccccCCc----------------hhHHHHHHHHHHc---ccCCcEEEEEeeccc----ccchHHHHHHHH
Q 047630 298 TLDIVHSMHVLSNWIPT----------------TLLHFLMFDIYRV---LRPGGLFWLDHFFCV----GAQLEDVYVPLI 354 (392)
Q Consensus 298 sFDlV~s~~~l~~~~~~----------------~~l~~~L~el~Rv---LKPGG~lii~~~~~~----~~~l~~~l~~ll 354 (392)
.+|+++....-..+..- +....++.++.|+ ++|- +|++.....- .....+.+.+.+
T Consensus 169 ~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk-~fvlENV~gl~s~~~g~~f~~i~~~L 247 (482)
T 3me5_A 169 EHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPA-MFVLENVKNLKSHDKGKTFRIIMQTL 247 (482)
T ss_dssp CCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCS-EEEEEEETTTTTGGGGHHHHHHHHHH
T ss_pred CCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCc-EEEEeCcHHHhcccCCcHHHHHHHHH
Confidence 58999876443322100 0001244554444 4673 5556654321 223445678889
Q ss_pred HHcCCeEE
Q 047630 355 ESVGFNKL 362 (392)
Q Consensus 355 ~~aGf~~i 362 (392)
++.||.+.
T Consensus 248 ~~lGY~v~ 255 (482)
T 3me5_A 248 DELGYDVA 255 (482)
T ss_dssp HHTTEEET
T ss_pred hcCCcEEE
Confidence 99999864
No 341
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=82.78 E-value=1.5 Score=41.60 Aligned_cols=93 Identities=14% Similarity=-0.005 Sum_probs=55.8
Q ss_pred CCCCcccEEEEEc--CCcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC------CCCCCcccEE
Q 047630 232 KKPGTIRIGLDIG--GGVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL------PFFDNTLDIV 302 (392)
Q Consensus 232 ~~~~~ir~VLDIG--CGtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L------pf~d~sFDlV 302 (392)
.++.++ |-+| .|.|..+..+++ .|.+|++++ .+....+.+.+.|.-..+.....++ -.....+|+|
T Consensus 139 ~~g~~V---lV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~--~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvv 213 (325)
T 3jyn_A 139 KPGEII---LFHAAAGGVGSLACQWAKALGAKLIGTV--SSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVV 213 (325)
T ss_dssp CTTCEE---EESSTTSHHHHHHHHHHHHHTCEEEEEE--SSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCCEE---EEEcCCcHHHHHHHHHHHHCCCEEEEEe--CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEE
Confidence 344444 8888 345777777776 788998855 3344455555556322222211111 0123469999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
+.+-.- ..+....+.|++||.+++...
T Consensus 214 id~~g~----------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 214 YDGVGQ----------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EESSCG----------GGHHHHHTTEEEEEEEEECCC
T ss_pred EECCCh----------HHHHHHHHHhcCCCEEEEEec
Confidence 875432 145788899999999977643
No 342
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=82.73 E-value=1.9 Score=41.52 Aligned_cols=95 Identities=9% Similarity=0.061 Sum_probs=56.0
Q ss_pred hhCCCCcccEEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccC-cC--CCCCCcccEEEE
Q 047630 230 ATKKPGTIRIGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQ-RL--PFFDNTLDIVHS 304 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~-~L--pf~d~sFDlV~s 304 (392)
.+.++.++ |-+|+|. |..+..+++ .|..|++++.+ ....+.+.+.|.-.++..... ++ ... +.+|+|+.
T Consensus 176 ~~~~g~~V---lV~GaG~vG~~~~qlak~~Ga~Vi~~~~~--~~~~~~~~~lGa~~v~~~~~~~~~~~~~~-~~~D~vid 249 (360)
T 1piw_A 176 GCGPGKKV---GIVGLGGIGSMGTLISKAMGAETYVISRS--SRKREDAMKMGADHYIATLEEGDWGEKYF-DTFDLIVV 249 (360)
T ss_dssp TCSTTCEE---EEECCSHHHHHHHHHHHHHTCEEEEEESS--STTHHHHHHHTCSEEEEGGGTSCHHHHSC-SCEEEEEE
T ss_pred CCCCCCEE---EEECCCHHHHHHHHHHHHCCCEEEEEcCC--HHHHHHHHHcCCCEEEcCcCchHHHHHhh-cCCCEEEE
Confidence 45555555 9999864 777777777 68888886543 344555555663222222111 11 011 46999986
Q ss_pred cccccccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 305 MHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 305 ~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
.-.-. +. ..+.++.+.|++||.++..
T Consensus 250 ~~g~~---~~----~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 250 CASSL---TD----IDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp CCSCS---TT----CCTTTGGGGEEEEEEEEEC
T ss_pred CCCCC---cH----HHHHHHHHHhcCCCEEEEe
Confidence 54320 00 1245677899999998754
No 343
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=82.68 E-value=1.2 Score=43.48 Aligned_cols=72 Identities=7% Similarity=-0.052 Sum_probs=46.0
Q ss_pred hCCCCcccEEEEEcCCcchHHHHHHHc-C--CEEEEEecCCCchhHHHHHhc---CCccEEEeccCcCCC------CCCc
Q 047630 231 TKKPGTIRIGLDIGGGVATFAVRMMER-N--ITIVTTSMNLNGPFNNFIASR---GVVPLYISISQRLPF------FDNT 298 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGtG~~a~~La~~-g--~~vvg~~iD~~a~~~~~aa~r---g~i~~~~~d~~~Lpf------~d~s 298 (392)
+.+++.+ +|..||.|..+..+++. + -.|+|+|.| ....+.+ ++ ..+.++.++...+.- -.++
T Consensus 55 i~pggiy---VD~TlG~GGHS~~iL~~lg~~GrVig~D~D--p~Al~~A-~rL~~~Rv~lv~~nF~~l~~~L~~~g~~~~ 128 (347)
T 3tka_A 55 IRPDGIY---IDGTFGRGGHSRLILSQLGEEGRLLAIDRD--PQAIAVA-KTIDDPRFSIIHGPFSALGEYVAERDLIGK 128 (347)
T ss_dssp CCTTCEE---EESCCTTSHHHHHHHTTCCTTCEEEEEESC--HHHHHHH-TTCCCTTEEEEESCGGGHHHHHHHTTCTTC
T ss_pred CCCCCEE---EEeCcCCCHHHHHHHHhCCCCCEEEEEECC--HHHHHHH-HhhcCCcEEEEeCCHHHHHHHHHhcCCCCc
Confidence 4555555 99999999999999985 3 468885544 3444433 22 236677777665421 1136
Q ss_pred ccEEEEcccc
Q 047630 299 LDIVHSMHVL 308 (392)
Q Consensus 299 FDlV~s~~~l 308 (392)
+|.|+....+
T Consensus 129 vDgILfDLGV 138 (347)
T 3tka_A 129 IDGILLDLGV 138 (347)
T ss_dssp EEEEEEECSC
T ss_pred ccEEEECCcc
Confidence 8999875444
No 344
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=82.67 E-value=3.1 Score=39.93 Aligned_cols=94 Identities=11% Similarity=0.122 Sum_probs=58.4
Q ss_pred HhhCCC------CcccEEEEEcCCc-chHH-HHHH-H-cCCE-EEEEecCCCch---hHHHHHhcCCccEEEeccCcCCC
Q 047630 229 LATKKP------GTIRIGLDIGGGV-ATFA-VRMM-E-RNIT-IVTTSMNLNGP---FNNFIASRGVVPLYISISQRLPF 294 (392)
Q Consensus 229 l~l~~~------~~ir~VLDIGCGt-G~~a-~~La-~-~g~~-vvg~~iD~~a~---~~~~aa~rg~i~~~~~d~~~Lpf 294 (392)
..+.++ .+| |-+|+|. |.++ ..++ + .|.. |++++.+ .. ..+.+.+.|. ..+ +...-.+
T Consensus 162 ~~~~~g~~~~~~~~V---lV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~--~~~~~~~~~~~~lGa-~~v--~~~~~~~ 233 (357)
T 2b5w_A 162 AYASRSAFDWDPSSA---FVLGNGSLGLLTLAMLKVDDKGYENLYCLGRR--DRPDPTIDIIEELDA-TYV--DSRQTPV 233 (357)
T ss_dssp HHHTTTTSCCCCCEE---EEECCSHHHHHHHHHHHHCTTCCCEEEEEECC--CSSCHHHHHHHHTTC-EEE--ETTTSCG
T ss_pred cCCCCCcccCCCCEE---EEECCCHHHHHHHHHHHHHHcCCcEEEEEeCC--cccHHHHHHHHHcCC-ccc--CCCccCH
Confidence 456666 555 8999754 7788 8888 6 6876 8886643 33 4556666663 322 3221111
Q ss_pred C-----CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 295 F-----DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 295 ~-----d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
. .+.+|+|+-.-.- . ..+.++.+.|++||.++....
T Consensus 234 ~~i~~~~gg~Dvvid~~g~------~---~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 234 EDVPDVYEQMDFIYEATGF------P---KHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp GGHHHHSCCEEEEEECSCC------H---HHHHHHHHHEEEEEEEEECCC
T ss_pred HHHHHhCCCCCEEEECCCC------h---HHHHHHHHHHhcCCEEEEEeC
Confidence 1 2368998854321 1 257888999999999977643
No 345
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=82.49 E-value=2.4 Score=40.92 Aligned_cols=95 Identities=15% Similarity=0.148 Sum_probs=57.8
Q ss_pred hhCCCCcccEEEEEc--CCcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC-----CCCCCcccE
Q 047630 230 ATKKPGTIRIGLDIG--GGVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-----PFFDNTLDI 301 (392)
Q Consensus 230 ~l~~~~~ir~VLDIG--CGtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-----pf~d~sFDl 301 (392)
.+.++.++ |-+| .|.|..+..+++ .|.+|++++ .+....+.+.+.|....+......+ ......+|+
T Consensus 160 ~~~~g~~V---lV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~--~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~ 234 (362)
T 2c0c_A 160 GLSEGKKV---LVTAAAGGTGQFAMQLSKKAKCHVIGTC--SSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDV 234 (362)
T ss_dssp CCCTTCEE---EETTTTBTTHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred CCCCCCEE---EEeCCCcHHHHHHHHHHHhCCCEEEEEE--CCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCE
Confidence 44555555 9998 567888888877 788888855 3234445555556322222111111 001246899
Q ss_pred EEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 302 VHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 302 V~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
|+..-.- ..+..+.+.|++||.+++...
T Consensus 235 vid~~g~----------~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 235 VYESVGG----------AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEECSCT----------HHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCH----------HHHHHHHHHHhcCCEEEEEeC
Confidence 9865431 257888899999999877643
No 346
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=82.10 E-value=4.4 Score=38.48 Aligned_cols=93 Identities=15% Similarity=0.121 Sum_probs=56.3
Q ss_pred hhCCCCcccEEEEEcCC-cchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCC------CCcccE
Q 047630 230 ATKKPGTIRIGLDIGGG-VATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFF------DNTLDI 301 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCG-tG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~------d~sFDl 301 (392)
.+.++.++ |-+|+| .|..+..+++ .|.+|++++ .+....+.+.+.|. .... +..+-.+. .+.+|+
T Consensus 161 ~~~~g~~V---lV~GaG~vG~~~~~~a~~~Ga~Vi~~~--~~~~~~~~~~~lGa-~~~~-d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 161 GAKPGEWV---AIYGIGGLGHVAVQYAKAMGLNVVAVD--IGDEKLELAKELGA-DLVV-NPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TCCTTCEE---EEECCSTTHHHHHHHHHHTTCEEEEEC--SCHHHHHHHHHTTC-SEEE-CTTTSCHHHHHHHHHSSEEE
T ss_pred CCCCCCEE---EEECCCHHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHHCCC-CEEe-cCCCccHHHHHHHHhCCCCE
Confidence 45566555 889885 4777777776 788888844 43444555555563 3222 21111110 036898
Q ss_pred EEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 302 VHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 302 V~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
|+..-.. ...+.++.+.|++||.++...
T Consensus 234 vid~~g~---------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 234 AVVTAVS---------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EEESSCC---------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCCC---------HHHHHHHHHHhhcCCEEEEec
Confidence 8865431 135788889999999997653
No 347
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=81.83 E-value=1.9 Score=40.88 Aligned_cols=92 Identities=12% Similarity=0.038 Sum_probs=54.9
Q ss_pred CCCCcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC------CCCCcccEE
Q 047630 232 KKPGTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP------FFDNTLDIV 302 (392)
Q Consensus 232 ~~~~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp------f~d~sFDlV 302 (392)
.++.++ |-+|+ |.|..+..+++ .|.+|++++ .+....+.+.+.|....+.....++. .....+|+|
T Consensus 147 ~~g~~v---lV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~--~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~v 221 (334)
T 3qwb_A 147 KKGDYV---LLFAAAGGVGLILNQLLKMKGAHTIAVA--STDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDAS 221 (334)
T ss_dssp CTTCEE---EESSTTBHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCCEE---EEECCCCHHHHHHHHHHHHCCCEEEEEe--CCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEE
Confidence 344444 88984 45777777776 789998855 33444455555563222222111110 123469999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+..-.- ..+....+.|++||.+++..
T Consensus 222 id~~g~----------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 222 FDSVGK----------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EECCGG----------GGHHHHHHHEEEEEEEEECC
T ss_pred EECCCh----------HHHHHHHHHhccCCEEEEEc
Confidence 865432 14677889999999997753
No 348
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=81.29 E-value=2.1 Score=40.92 Aligned_cols=92 Identities=16% Similarity=0.137 Sum_probs=55.2
Q ss_pred hCCCCcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC------CCCCcccE
Q 047630 231 TKKPGTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP------FFDNTLDI 301 (392)
Q Consensus 231 l~~~~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp------f~d~sFDl 301 (392)
+.++.++ |-+|+ |.|..+..+++ .|.+|++++.+ ....+.+.+.|...++... .++. .....+|+
T Consensus 157 ~~~g~~V---lV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~--~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 157 LRAGETV---LVLGAAGGIGTAAIQIAKGMGAKVIAVVNR--TAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDM 230 (342)
T ss_dssp CCTTCEE---EESSTTSHHHHHHHHHHHHTTCEEEEEESS--GGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEE
T ss_pred CCCCCEE---EEECCCCHHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceE
Confidence 3344445 99987 45777777776 78999886543 3445555555632222222 2110 12236999
Q ss_pred EEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 302 VHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 302 V~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
|+..-.- ..+....+.|++||.+++..
T Consensus 231 vid~~g~----------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 231 VVDPIGG----------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEESCC------------CHHHHHHTEEEEEEEEEC-
T ss_pred EEECCch----------hHHHHHHHhhcCCCEEEEEE
Confidence 9865432 13577889999999997653
No 349
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=81.14 E-value=1.6 Score=41.35 Aligned_cols=91 Identities=10% Similarity=0.027 Sum_probs=53.9
Q ss_pred hCCCCcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCc---C-----CCCCCcc
Q 047630 231 TKKPGTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQR---L-----PFFDNTL 299 (392)
Q Consensus 231 l~~~~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~---L-----pf~d~sF 299 (392)
+.++..+ |-.|+ |.|..+..++. .|.+|++++. +....+.+.+.|. .... |..+ + ....+.+
T Consensus 143 ~~~g~~v---lV~Ga~ggiG~~~~~~~~~~G~~V~~~~~--~~~~~~~~~~~g~-~~~~-d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 143 VKGGETV---LVSAAAGAVGSVVGQIAKLKGCKVVGAAG--SDEKIAYLKQIGF-DAAF-NYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CCSSCEE---EEESTTBHHHHHHHHHHHHTTCEEEEEES--SHHHHHHHHHTTC-SEEE-ETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCCEE---EEecCCCcHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHhcCC-cEEE-ecCCHHHHHHHHHHHhCCCC
Confidence 3444444 99997 55666666655 7889888553 2344444544453 2222 2111 1 0012469
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
|+|+.+-.- ..+.+..+.|++||++++..
T Consensus 216 d~vi~~~g~----------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVGG----------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSCH----------HHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh----------HHHHHHHHHHhcCCEEEEEe
Confidence 998865431 24688889999999997654
No 350
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=80.78 E-value=5.5 Score=37.04 Aligned_cols=75 Identities=9% Similarity=-0.094 Sum_probs=50.4
Q ss_pred ccEEEeccCc-CC-----CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecc-cccchHHHHHHHH
Q 047630 282 VPLYISISQR-LP-----FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC-VGAQLEDVYVPLI 354 (392)
Q Consensus 282 i~~~~~d~~~-Lp-----f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~-~~~~l~~~l~~ll 354 (392)
+.++.+++.+ +| .+..+||+|+.-.-. .+.....+..+...|+|||+++++++.. .+....+.+.+.+
T Consensus 160 i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-----Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~w~G~~~A~~ef~ 234 (257)
T 3tos_A 160 SVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-----YEPTKAVLEAIRPYLTKGSIVAFDELDNPKWPGENIAMRKVL 234 (257)
T ss_dssp EEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-----HHHHHHHHHHHGGGEEEEEEEEESSTTCTTCTHHHHHHHHHT
T ss_pred EEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-----cchHHHHHHHHHHHhCCCcEEEEcCCCCCCChHHHHHHHHHH
Confidence 6788887543 22 245679999976532 1333467889999999999999999742 2334455577777
Q ss_pred HHcCCeE
Q 047630 355 ESVGFNK 361 (392)
Q Consensus 355 ~~aGf~~ 361 (392)
.+.|.+.
T Consensus 235 ~~~~~~i 241 (257)
T 3tos_A 235 GLDHAPL 241 (257)
T ss_dssp CTTSSCC
T ss_pred hhCCCeE
Confidence 7766443
No 351
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=80.55 E-value=1.5 Score=41.82 Aligned_cols=93 Identities=17% Similarity=0.152 Sum_probs=57.4
Q ss_pred hhCCCCcccEEEEEcCCc-chHHHHHHH-c--CCEEEEEecCCCchhHHHHHhcCCccEEEecc-----CcCCCCCCccc
Q 047630 230 ATKKPGTIRIGLDIGGGV-ATFAVRMME-R--NITIVTTSMNLNGPFNNFIASRGVVPLYISIS-----QRLPFFDNTLD 300 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGt-G~~a~~La~-~--g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~-----~~Lpf~d~sFD 300 (392)
.+ ++.++ |-+|+|. |..+..+++ . |..|++++ .+....+.+.+.|.-.++.... ..+. ....+|
T Consensus 168 ~~-~g~~V---lV~GaG~vG~~aiqlak~~~~Ga~Vi~~~--~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D 240 (344)
T 2h6e_A 168 KF-AEPVV---IVNGIGGLAVYTIQILKALMKNITIVGIS--RSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGAS 240 (344)
T ss_dssp TC-SSCEE---EEECCSHHHHHHHHHHHHHCTTCEEEEEC--SCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEE
T ss_pred CC-CCCEE---EEECCCHHHHHHHHHHHHhcCCCEEEEEe--CCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCcc
Confidence 45 66666 9999864 777777777 6 88888844 4344555555556322221111 1111 123699
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+|+-.-.- ...+.++.+.|++||.++...
T Consensus 241 ~vid~~g~---------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 241 IAIDLVGT---------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEESSCC---------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCC---------hHHHHHHHHHhhcCCEEEEeC
Confidence 99865432 135788899999999997653
No 352
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=80.48 E-value=1.7 Score=41.48 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=55.5
Q ss_pred hhCCCCcccEEEEEcCC--cchHHHHHHH-c-CCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC-----CCCC-Ccc
Q 047630 230 ATKKPGTIRIGLDIGGG--VATFAVRMME-R-NITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-----PFFD-NTL 299 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCG--tG~~a~~La~-~-g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-----pf~d-~sF 299 (392)
.+.++..+ |-+|+| .|..+..+++ . |.+|++++.+ ....+.+.+.|....+....... .... +.+
T Consensus 167 ~~~~g~~v---lV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 167 SLDPTKTL---LVVGAGGGLGTMAVQIAKAVSGATIIGVDVR--EEAVEAAKRAGADYVINASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp TCCTTCEE---EEETTTSHHHHHHHHHHHHHTCCEEEEEESS--HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCCCEE---EEECCCccHHHHHHHHHHHcCCCeEEEEcCC--HHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCc
Confidence 34455555 999988 4566666665 6 8998885533 34444454445322221111110 1112 479
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
|+|+..-.- ...+.++.+.|++||.+++..
T Consensus 242 d~vi~~~g~---------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 242 DAVIDLNNS---------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EEEEESCCC---------HHHHTTGGGGEEEEEEEEECC
T ss_pred eEEEECCCC---------HHHHHHHHHHHhcCCEEEEEC
Confidence 999865432 135688889999999997754
No 353
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=80.09 E-value=3.3 Score=39.40 Aligned_cols=86 Identities=12% Similarity=0.015 Sum_probs=52.8
Q ss_pred EEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC--------CCCCcccEEEEccc
Q 047630 239 IGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP--------FFDNTLDIVHSMHV 307 (392)
Q Consensus 239 ~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp--------f~d~sFDlV~s~~~ 307 (392)
.||-+|+ |.|..+..+++ .|.+|++++.+ ....+.+.+.|. .... +..+-. .....+|+|+..-.
T Consensus 169 ~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~--~~~~~~~~~~ga-~~~~-d~~~~~~~~~~~~~~~~~~~d~vi~~~g 244 (343)
T 2eih_A 169 DVLVMAAGSGVSVAAIQIAKLFGARVIATAGS--EDKLRRAKALGA-DETV-NYTHPDWPKEVRRLTGGKGADKVVDHTG 244 (343)
T ss_dssp EEEECSTTSTTHHHHHHHHHHTTCEEEEEESS--HHHHHHHHHHTC-SEEE-ETTSTTHHHHHHHHTTTTCEEEEEESSC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHhcCC-CEEE-cCCcccHHHHHHHHhCCCCceEEEECCC
Confidence 3499998 67888777776 78898885533 344444544453 2222 211111 11246999987654
Q ss_pred ccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 308 LSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 308 l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
.. .+..+.+.|++||.++...
T Consensus 245 -~~---------~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 245 -AL---------YFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp -SS---------SHHHHHHHEEEEEEEEESS
T ss_pred -HH---------HHHHHHHhhccCCEEEEEe
Confidence 11 3577889999999987653
No 354
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=79.90 E-value=2.2 Score=40.07 Aligned_cols=85 Identities=21% Similarity=0.226 Sum_probs=51.8
Q ss_pred CCCCCCcccEEEEc----ccccccCCchh----HHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEE
Q 047630 292 LPFFDNTLDIVHSM----HVLSNWIPTTL----LHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 292 Lpf~d~sFDlV~s~----~~l~~~~~~~~----l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~ 363 (392)
+|-.-+.||+|+.+ +-.||...-++ +..+-....+.|+|||.+++..+.-.+..-+..+..+..+ |+..+
T Consensus 205 ~P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARk--F~~~r 282 (324)
T 3trk_A 205 LPATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRK--FRSSR 282 (324)
T ss_dssp CCGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTT--EEEEE
T ss_pred CCCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhh--heeee
Confidence 44344799999987 34455432222 3335566789999999999998866555555545554444 66665
Q ss_pred EEEeeccCCCCcccceee
Q 047630 364 WVVGRKLDRGPELREMYL 381 (392)
Q Consensus 364 w~~~~k~d~~~~~~e~yl 381 (392)
...- .-.....|+++
T Consensus 283 v~~P---~cv~snTEv~~ 297 (324)
T 3trk_A 283 ALKP---PCVTSNTEMFF 297 (324)
T ss_dssp EECC---TTCCBTTCEEE
T ss_pred eecC---ccccccceEEE
Confidence 4422 11224567766
No 355
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=78.85 E-value=3.7 Score=39.15 Aligned_cols=92 Identities=10% Similarity=0.089 Sum_probs=55.0
Q ss_pred CCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEeccCcC-----C-CCCCcccEEE
Q 047630 233 KPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-----P-FFDNTLDIVH 303 (392)
Q Consensus 233 ~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-----p-f~d~sFDlV~ 303 (392)
++.++ |-+|+|. |..+..+++ .|. +|++++ .+....+.+.+.|....+.....++ . .....+|+|+
T Consensus 167 ~g~~V---lV~GaG~vG~~~~q~a~~~Ga~~Vi~~~--~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vi 241 (348)
T 2d8a_A 167 SGKSV---LITGAGPLGLLGIAVAKASGAYPVIVSE--PSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFL 241 (348)
T ss_dssp TTCCE---EEECCSHHHHHHHHHHHHTTCCSEEEEC--SCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEE---EEECCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEE
Confidence 55555 9999864 677777776 688 888844 4344445555556322221111111 0 0123699998
Q ss_pred EcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 304 SMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 304 s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
..-.. ...+.++.+.|++||.++...
T Consensus 242 d~~g~---------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 242 EFSGA---------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp ECSCC---------HHHHHHHHHHEEEEEEEEECC
T ss_pred ECCCC---------HHHHHHHHHHHhcCCEEEEEc
Confidence 65432 135788899999999987653
No 356
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=78.65 E-value=1.8 Score=40.45 Aligned_cols=92 Identities=12% Similarity=0.020 Sum_probs=54.2
Q ss_pred hCCCCcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEecc-CcCCCCCCcccEEEEcc
Q 047630 231 TKKPGTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISIS-QRLPFFDNTLDIVHSMH 306 (392)
Q Consensus 231 l~~~~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~-~~Lpf~d~sFDlV~s~~ 306 (392)
+.++.++ |-+|+ |.|..+..+++ .|.+|++++.+ ....+.+.+.|....+.... .++.-.-+.+|+|+. -
T Consensus 123 ~~~g~~v---lV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~--~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~ 196 (302)
T 1iz0_A 123 ARPGEKV---LVQAAAGALGTAAVQVARAMGLRVLAAASR--PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-V 196 (302)
T ss_dssp CCTTCEE---EESSTTBHHHHHHHHHHHHTTCEEEEEESS--GGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-C
T ss_pred CCCCCEE---EEECCCcHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-C
Confidence 4455555 99997 45777777776 78898886543 34445555556322221111 111000046899987 3
Q ss_pred cccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 307 VLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 307 ~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
.- . .+....+.|++||.++...
T Consensus 197 g~------~----~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 197 RG------K----EVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp SC------T----THHHHHTTEEEEEEEEEC-
T ss_pred CH------H----HHHHHHHhhccCCEEEEEe
Confidence 21 1 4578889999999987643
No 357
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=78.65 E-value=2.6 Score=40.24 Aligned_cols=92 Identities=15% Similarity=0.074 Sum_probs=55.7
Q ss_pred hCCCCcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccC---cCC-----CCCCcc
Q 047630 231 TKKPGTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQ---RLP-----FFDNTL 299 (392)
Q Consensus 231 l~~~~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~---~Lp-----f~d~sF 299 (392)
+.++..+ |-+|+ |.|..+..+++ .|.+|++++.+ ....+.+.+.|. .... |.. .+. ..++.+
T Consensus 167 ~~~g~~v---lV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~--~~~~~~~~~~g~-~~~~-d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 167 LMAGHWV---AISGAAGGLGSLAVQYAKAMGYRVLGIDGG--EGKEELFRSIGG-EVFI-DFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp CCTTCEE---EEETTTSHHHHHHHHHHHHTTCEEEEEECS--TTHHHHHHHTTC-CEEE-ETTTCSCHHHHHHHHHTSCE
T ss_pred CCCCCEE---EEECCCchHHHHHHHHHHHCCCcEEEEcCC--HHHHHHHHHcCC-ceEE-ecCccHhHHHHHHHHhCCCC
Confidence 4455555 99998 46777766666 78898886544 344445555553 3222 211 110 011268
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
|+|+.+-.. ...++++.+.|++||.+++..
T Consensus 240 D~vi~~~g~---------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 240 HGVINVSVS---------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEEEECSSC---------HHHHHHHTTSEEEEEEEEECC
T ss_pred CEEEECCCc---------HHHHHHHHHHHhcCCEEEEEe
Confidence 998875432 136788999999999997654
No 358
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=78.08 E-value=3 Score=39.66 Aligned_cols=94 Identities=11% Similarity=0.018 Sum_probs=58.6
Q ss_pred hhCCCCcccEEEEEcCCc-chHHHHHHH-c-CCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC-----C-CCCccc
Q 047630 230 ATKKPGTIRIGLDIGGGV-ATFAVRMME-R-NITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP-----F-FDNTLD 300 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGt-G~~a~~La~-~-g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp-----f-~d~sFD 300 (392)
.+.++..+ |-+|+|. |..+..+++ . +..|++++ .+....+.+.+.|...++..+ .++. . ....+|
T Consensus 168 ~~~~g~~v---lv~GaG~vG~~a~qla~~~g~~~Vi~~~--~~~~~~~~~~~lGa~~~i~~~-~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 168 LLGPGSTA---VVIGVGGLGHVGIQILRAVSAARVIAVD--LDDDRLALAREVGADAAVKSG-AGAADAIRELTGGQGAT 241 (345)
T ss_dssp GCCTTCEE---EEECCSHHHHHHHHHHHHHCCCEEEEEE--SCHHHHHHHHHTTCSEEEECS-TTHHHHHHHHHGGGCEE
T ss_pred CCCCCCEE---EEECCCHHHHHHHHHHHHcCCCEEEEEc--CCHHHHHHHHHcCCCEEEcCC-CcHHHHHHHHhCCCCCe
Confidence 34555555 8888875 778888887 4 77888854 434555566666743333221 1110 0 123689
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+|+-.-.- ...+..+.+.|++||.+++..
T Consensus 242 ~v~d~~G~---------~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 242 AVFDFVGA---------QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEESSCC---------HHHHHHHHHHEEEEEEEEECS
T ss_pred EEEECCCC---------HHHHHHHHHHHhcCCEEEEEC
Confidence 88864321 136788999999999997764
No 359
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=77.64 E-value=10 Score=30.98 Aligned_cols=105 Identities=14% Similarity=0.084 Sum_probs=60.9
Q ss_pred EEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCC----CCCcccEEEEcccccccCCc
Q 047630 241 LDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPF----FDNTLDIVHSMHVLSNWIPT 314 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf----~d~sFDlV~s~~~l~~~~~~ 314 (392)
+=+|+|. |. ++..|.+.|..++++|.| ....+.+.+.| +.++.+|..+... .-..+|+|+....- +
T Consensus 11 iIiG~G~~G~~la~~L~~~g~~v~vid~~--~~~~~~~~~~g-~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~-----~ 82 (140)
T 3fwz_A 11 LLVGYGRVGSLLGEKLLASDIPLVVIETS--RTRVDELRERG-VRAVLGNAANEEIMQLAHLECAKWLILTIPN-----G 82 (140)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEEEEESC--HHHHHHHHHTT-CEEEESCTTSHHHHHHTTGGGCSEEEECCSC-----H
T ss_pred EEECcCHHHHHHHHHHHHCCCCEEEEECC--HHHHHHHHHcC-CCEEECCCCCHHHHHhcCcccCCEEEEECCC-----h
Confidence 7788875 43 455555689999995543 45555566666 5778887554211 12467888865321 1
Q ss_pred hhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeE
Q 047630 315 TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNK 361 (392)
Q Consensus 315 ~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~ 361 (392)
.. ...+....|.+.|+..++..... ....+.++++|-..
T Consensus 83 ~~-n~~~~~~a~~~~~~~~iiar~~~-------~~~~~~l~~~G~d~ 121 (140)
T 3fwz_A 83 YE-AGEIVASARAKNPDIEIIARAHY-------DDEVAYITERGANQ 121 (140)
T ss_dssp HH-HHHHHHHHHHHCSSSEEEEEESS-------HHHHHHHHHTTCSE
T ss_pred HH-HHHHHHHHHHHCCCCeEEEEECC-------HHHHHHHHHCCCCE
Confidence 11 12344566777888876544311 12445677888654
No 360
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=77.56 E-value=3.8 Score=39.73 Aligned_cols=95 Identities=12% Similarity=0.109 Sum_probs=56.5
Q ss_pred hCCCCcccEEEEEcCCc-chHHHHHHH-cC-CEEEEEecCCCchhHHHHHhcCCccEEEec---cCc----C-CC-CCCc
Q 047630 231 TKKPGTIRIGLDIGGGV-ATFAVRMME-RN-ITIVTTSMNLNGPFNNFIASRGVVPLYISI---SQR----L-PF-FDNT 298 (392)
Q Consensus 231 l~~~~~ir~VLDIGCGt-G~~a~~La~-~g-~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d---~~~----L-pf-~d~s 298 (392)
+.++.+| |-+|+|. |..+..+++ .| .+|++++ .+....+.+.+.|.-.++... ..+ + .. ....
T Consensus 193 ~~~g~~V---lV~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g 267 (380)
T 1vj0_A 193 SFAGKTV---VIQGAGPLGLFGVVIARSLGAENVIVIA--GSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRG 267 (380)
T ss_dssp CCBTCEE---EEECCSHHHHHHHHHHHHTTBSEEEEEE--SCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred CCCCCEE---EEECcCHHHHHHHHHHHHcCCceEEEEc--CCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCC
Confidence 4444445 8899663 777778777 68 5888855 334455556666642222211 111 1 01 1236
Q ss_pred ccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 299 LDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
+|+|+-.-.- . ..+.+..+.|++||.++....
T Consensus 268 ~Dvvid~~g~------~---~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 268 ADFILEATGD------S---RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp EEEEEECSSC------T---THHHHHHHHEEEEEEEEECCC
T ss_pred CcEEEECCCC------H---HHHHHHHHHHhcCCEEEEEec
Confidence 9999865431 1 256888899999999976643
No 361
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=77.55 E-value=7.1 Score=37.28 Aligned_cols=98 Identities=10% Similarity=0.055 Sum_probs=57.1
Q ss_pred HHhhCCCCcccEEEEEcCCc-chHHHHHHH-cCCE-EEEEecCCCchhHHHHHhcCC--ccEEEec--cCcC------CC
Q 047630 228 VLATKKPGTIRIGLDIGGGV-ATFAVRMME-RNIT-IVTTSMNLNGPFNNFIASRGV--VPLYISI--SQRL------PF 294 (392)
Q Consensus 228 ll~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~~-vvg~~iD~~a~~~~~aa~rg~--i~~~~~d--~~~L------pf 294 (392)
...+.++.+| |=+|+|. |.++..+++ .|.. |++++.+ ....+.+.+.+. +.....+ ..++ -.
T Consensus 174 ~~~~~~g~~V---lV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~--~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 174 RAGVRLGDPV---LICGAGPIGLITMLCAKAAGACPLVITDID--EGRLKFAKEICPEVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp HHTCCTTCCE---EEECCSHHHHHHHHHHHHTTCCSEEEEESC--HHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHT
T ss_pred HcCCCCCCEE---EEECCCHHHHHHHHHHHHcCCCEEEEECCC--HHHHHHHHHhchhcccccccccchHHHHHHHHHHh
Confidence 3446666666 7788865 778888887 6876 7775532 344444443321 1111110 0110 01
Q ss_pred CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 295 FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 295 ~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
....+|+|+-.-.- . ..+..+.+.|++||++++...
T Consensus 249 ~g~g~Dvvid~~g~------~---~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 249 GGIEPAVALECTGV------E---SSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp SSCCCSEEEECSCC------H---HHHHHHHHHSCTTCEEEECCC
T ss_pred CCCCCCEEEECCCC------h---HHHHHHHHHhcCCCEEEEEcc
Confidence 23469999865331 1 357888999999999987643
No 362
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=77.51 E-value=2.6 Score=39.99 Aligned_cols=92 Identities=12% Similarity=0.057 Sum_probs=54.7
Q ss_pred hCCCCcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHH-hcCCccEEEecc--CcCC-----CCCCcc
Q 047630 231 TKKPGTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIA-SRGVVPLYISIS--QRLP-----FFDNTL 299 (392)
Q Consensus 231 l~~~~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa-~rg~i~~~~~d~--~~Lp-----f~d~sF 299 (392)
+.++..+ |-+|+ |.|..+..+++ .|.+|++++ .+....+.+. +.|. ....... ..+. ...+.+
T Consensus 153 ~~~g~~v---lI~Ga~g~iG~~~~~~a~~~G~~V~~~~--~~~~~~~~~~~~~g~-~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 153 PKEGETV---YVSAASGAVGQLVGQLAKMMGCYVVGSA--GSKEKVDLLKTKFGF-DDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp CCTTCEE---EESSTTSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHTSCC-SEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CCCCCEE---EEECCCcHHHHHHHHHHHHCCCEEEEEe--CCHHHHHHHHHHcCC-ceEEecCCHHHHHHHHHHHhCCCC
Confidence 4444445 99997 56777777776 788888855 3234444444 3453 3222111 1110 012468
Q ss_pred cEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 300 DIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 300 DlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
|+|+.+-.- ..+....+.|++||.+++..
T Consensus 227 d~vi~~~g~----------~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 227 DIYFENVGG----------KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEEESSCH----------HHHHHHHTTEEEEEEEEECC
T ss_pred cEEEECCCH----------HHHHHHHHHHhcCCEEEEEc
Confidence 998865431 25788889999999997653
No 363
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=76.53 E-value=8.4 Score=37.51 Aligned_cols=104 Identities=10% Similarity=0.095 Sum_probs=62.8
Q ss_pred HHH-HHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHH-----HHHhcCCcc--EE-EeccCc
Q 047630 221 LDF-SIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNN-----FIASRGVVP--LY-ISISQR 291 (392)
Q Consensus 221 ~~~-lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~-----~aa~rg~i~--~~-~~d~~~ 291 (392)
++. +++.+..+..++++ |.|+.+.|.++..++..++..+. | +-.+. +.+.++.-. +. ....+.
T Consensus 25 ~d~~ll~~~~~~~~~~~~---~~~~d~~gal~~~~~~~~~~~~~-d----s~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 96 (375)
T 4dcm_A 25 ADEYLLQQLDDTEIRGPV---LILNDAFGALSCALAEHKPYSIG-D----SYISELATRENLRLNGIDESSVKFLDSTAD 96 (375)
T ss_dssp HHHHHHHTTTTCCCCSCE---EEECCSSSHHHHHTGGGCCEEEE-S----CHHHHHHHHHHHHHTTCCGGGSEEEETTSC
T ss_pred HHHHHHHhhhhccCCCCE---EEECCCCCHHHHhhccCCceEEE-h----HHHHHHHHHHHHHHcCCCccceEecccccc
Confidence 344 34444333333455 99999999999998877665432 1 22222 333344311 22 222232
Q ss_pred CCCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 292 LPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 292 Lpf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
....||+|+.... .....+...|..+...|+||+.+++..-
T Consensus 97 ---~~~~~~~v~~~lp----k~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 97 ---YPQQPGVVLIKVP----KTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp ---CCSSCSEEEEECC----SCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred ---cccCCCEEEEEcC----CCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 3457999887443 2335667889999999999999977653
No 364
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=76.53 E-value=3.7 Score=38.68 Aligned_cols=87 Identities=17% Similarity=0.226 Sum_probs=51.8
Q ss_pred EEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEe-cc--CcC-CCCCCcccEEEEcccccccC
Q 047630 240 GLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYIS-IS--QRL-PFFDNTLDIVHSMHVLSNWI 312 (392)
Q Consensus 240 VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~-d~--~~L-pf~d~sFDlV~s~~~l~~~~ 312 (392)
||-+|+ |.|..+..+++ .|..+++++.+ ....+.+.+.|.-..+.. +. +.+ ....+.+|+|+-.-.-
T Consensus 153 VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~--~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~---- 226 (328)
T 1xa0_A 153 VLVTGATGGVGSLAVSMLAKRGYTVEASTGK--AAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG---- 226 (328)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCCEEEEESC--TTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT----
T ss_pred EEEecCCCHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH----
Confidence 499997 55778888877 68888885543 344455555563222211 11 001 1123468988865321
Q ss_pred CchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 313 PTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 313 ~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
. .+.+..+.|++||.+++..
T Consensus 227 --~----~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 227 --R----TLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp --T----THHHHHHTEEEEEEEEECS
T ss_pred --H----HHHHHHHhhccCCEEEEEe
Confidence 1 3577889999999997654
No 365
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=76.42 E-value=3.2 Score=39.09 Aligned_cols=87 Identities=15% Similarity=-0.013 Sum_probs=51.0
Q ss_pred EEEEEc--CCcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEe-ccCcC-----C-CCCCcccEEEEcccc
Q 047630 239 IGLDIG--GGVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYIS-ISQRL-----P-FFDNTLDIVHSMHVL 308 (392)
Q Consensus 239 ~VLDIG--CGtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~-d~~~L-----p-f~d~sFDlV~s~~~l 308 (392)
.||-.| .|.|..+..+++ .|.+|++++.+ ....+.+.+.|. ..... ...++ . .....+|+|+.+-.
T Consensus 143 ~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~--~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g- 218 (327)
T 1qor_A 143 QFLFHAAAGGVGLIACQWAKALGAKLIGTVGT--AQKAQSALKAGA-WQVINYREEDLVERLKEITGGKKVRVVYDSVG- 218 (327)
T ss_dssp EEEESSTTBHHHHHHHHHHHHHTCEEEEEESS--HHHHHHHHHHTC-SEEEETTTSCHHHHHHHHTTTCCEEEEEECSC-
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHcCC-CEEEECCCccHHHHHHHHhCCCCceEEEECCc-
Confidence 349998 355666666665 78898885533 334444444453 22221 11110 0 11236999987644
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
. ..+..+.+.|++||.+++..
T Consensus 219 -~--------~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 219 -R--------DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp -G--------GGHHHHHHTEEEEEEEEECC
T ss_pred -h--------HHHHHHHHHhcCCCEEEEEe
Confidence 1 24688889999999997654
No 366
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=76.34 E-value=6.7 Score=38.29 Aligned_cols=98 Identities=9% Similarity=0.067 Sum_probs=53.0
Q ss_pred CCCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEeccCcC-----C-CCCCcccEE
Q 047630 232 KKPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-----P-FFDNTLDIV 302 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-----p-f~d~sFDlV 302 (392)
.++.+| |=+|+|. |.++..+++ .|. .|+++ +.+....+.+.+.|.-.++.....++ . .....+|+|
T Consensus 212 ~~g~~V---lV~GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~v 286 (404)
T 3ip1_A 212 RPGDNV---VILGGGPIGLAAVAILKHAGASKVILS--EPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLF 286 (404)
T ss_dssp CTTCEE---EEECCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEE
T ss_pred CCCCEE---EEECCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEE
Confidence 344444 7788764 677777777 688 78884 44345555666667422222111111 0 123369999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+-.-.-.. .....++.-+.+.+++||.+++..
T Consensus 287 id~~g~~~----~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 287 LEATGVPQ----LVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EECSSCHH----HHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EECCCCcH----HHHHHHHHHHHhccCCCcEEEEeC
Confidence 86433210 111223333335559999997764
No 367
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=76.00 E-value=48 Score=32.65 Aligned_cols=55 Identities=7% Similarity=0.122 Sum_probs=32.7
Q ss_pred ccCCcEEEEEeecccc----cchHHHHHHHHHHcCCeEEEEEEeeccCCCC--cccceeeEEE
Q 047630 328 LRPGGLFWLDHFFCVG----AQLEDVYVPLIESVGFNKLKWVVGRKLDRGP--ELREMYLSAL 384 (392)
Q Consensus 328 LKPGG~lii~~~~~~~----~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~~--~~~e~ylsai 384 (392)
++| -++++.....-. ....+.+.+.+++.||. +.|.+....+.|. ....+|+.++
T Consensus 176 ~~P-k~~l~ENV~gl~~~~~~~~~~~i~~~l~~~GY~-v~~~vl~a~~~GvPQ~R~R~fiva~ 236 (403)
T 4dkj_A 176 EMP-KYLLMENVKNLLSHKNKKNYNTWLKQLEKFGYK-SKTYLLNSKNFDNCQNRERVFCLSI 236 (403)
T ss_dssp GSC-SEEEEEEEGGGGSHHHHHHHHHHHHHHHHTTEE-EEEEEEEGGGTTCSBCCEEEEEEEE
T ss_pred cCC-CEEEEecchhhhhhccchHHHHHHHHHHhCCCe-EEEEEecHHHcCCCccceEEEEEEE
Confidence 456 455565543321 22345678889999986 5677777666643 3445665443
No 368
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=75.96 E-value=27 Score=38.66 Aligned_cols=140 Identities=12% Similarity=0.148 Sum_probs=76.6
Q ss_pred EEEEEcCCcchHHHHHHHcCC-E-EEEEecCCCchhHHHHHhc-CCccEEEeccCc-----------------CCCCCCc
Q 047630 239 IGLDIGGGVATFAVRMMERNI-T-IVTTSMNLNGPFNNFIASR-GVVPLYISISQR-----------------LPFFDNT 298 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~-~-vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~-----------------Lpf~d~s 298 (392)
+++|+-||.|.++.-|.+.|. + +.+ +|++....+....+ ....++.+|+.. +| ..+.
T Consensus 542 ~~iDLFaG~GGlslGl~~AG~~~vv~a--vEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp-~~~~ 618 (1002)
T 3swr_A 542 RTLDVFSGCGGLSEGFHQAGISDTLWA--IEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLP-QKGD 618 (1002)
T ss_dssp EEEEESCTTSHHHHHHHHHTSEEEEEE--ECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCC-CTTT
T ss_pred eEEEeccCccHHHHHHHHCCCCceEEE--EECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcc-cCCC
Confidence 459999999999999999897 4 445 45533333322222 223445444321 22 1346
Q ss_pred ccEEEEcccccccCCc------------hhHHHHHHHHHHcccCCcEEEEEeecc----cccchHHHHHHHHHHcCCeEE
Q 047630 299 LDIVHSMHVLSNWIPT------------TLLHFLMFDIYRVLRPGGLFWLDHFFC----VGAQLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~------------~~l~~~L~el~RvLKPGG~lii~~~~~----~~~~l~~~l~~ll~~aGf~~i 362 (392)
+|+|+....-..+..- ..+-.-+..+.+.++|- +|++..... ......+.+.+.+++.||..
T Consensus 619 vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk-~~llENV~glls~~~~~~~~~i~~~L~~lGY~v- 696 (1002)
T 3swr_A 619 VEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPR-FFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC- 696 (1002)
T ss_dssp CSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCS-EEEEEEEGGGGTTGGGHHHHHHHHHHHHHTCEE-
T ss_pred eeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCC-EEEEeccHHHhccCcchHHHHHHHHHHhcCCeE-
Confidence 8999987543332110 01111223344556774 445555422 12233456777889999975
Q ss_pred EEEEeeccCCCC--cccceeeEE
Q 047630 363 KWVVGRKLDRGP--ELREMYLSA 383 (392)
Q Consensus 363 ~w~~~~k~d~~~--~~~e~ylsa 383 (392)
.|.+....+.|. ....+|+.+
T Consensus 697 ~~~vLnA~dyGvPQ~R~R~fiva 719 (1002)
T 3swr_A 697 TFGVLQAGQYGVAQTRRRAIILA 719 (1002)
T ss_dssp EEEEEEGGGGTCSBCCEEEEEEE
T ss_pred EEEEEEHHHCCCCccceEEEEEE
Confidence 677777665543 344555533
No 369
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=75.77 E-value=5.2 Score=41.37 Aligned_cols=84 Identities=23% Similarity=0.262 Sum_probs=52.5
Q ss_pred CCCCCCcccEEEEc----ccccccCCchh----HHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEE
Q 047630 292 LPFFDNTLDIVHSM----HVLSNWIPTTL----LHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 292 Lpf~d~sFDlV~s~----~~l~~~~~~~~----l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~ 363 (392)
+| +++.||+|+.+ +-.||+..-++ +..+-....+.|||||.+++..+.-.+..-+..+..+..+ |+..+
T Consensus 216 ~p-~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRk--F~~~r 292 (670)
T 4gua_A 216 FP-PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARK--FVRVS 292 (670)
T ss_dssp CC-CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHT--EEEEE
T ss_pred CC-CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhh--eeeee
Confidence 45 35789999987 44555532222 3345567789999999999998766555555555555555 66555
Q ss_pred EEEeeccCCCCcccceee
Q 047630 364 WVVGRKLDRGPELREMYL 381 (392)
Q Consensus 364 w~~~~k~d~~~~~~e~yl 381 (392)
.. +..-.....|+++
T Consensus 293 v~---~p~~~~snTEv~~ 307 (670)
T 4gua_A 293 AA---RPDCVSSNTEMYL 307 (670)
T ss_dssp EE---CCTTCSBTTCEEE
T ss_pred ee---CCCccccCceEEE
Confidence 33 2222234567776
No 370
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=75.58 E-value=9.5 Score=36.63 Aligned_cols=87 Identities=23% Similarity=0.277 Sum_probs=54.2
Q ss_pred EEEEEc-C-CcchHHHHHHHc--CCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC-----CCCCCcccEEEEccccc
Q 047630 239 IGLDIG-G-GVATFAVRMMER--NITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-----PFFDNTLDIVHSMHVLS 309 (392)
Q Consensus 239 ~VLDIG-C-GtG~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-----pf~d~sFDlV~s~~~l~ 309 (392)
.||=+| + |.|..+..+++. +.+|++++ .+....+.+.+.|. ..+.....++ ....+.+|+|+-.-.-
T Consensus 174 ~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~--~~~~~~~~~~~lGa-d~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~- 249 (363)
T 4dvj_A 174 AILIVGGAGGVGSIAVQIARQRTDLTVIATA--SRPETQEWVKSLGA-HHVIDHSKPLAAEVAALGLGAPAFVFSTTHT- 249 (363)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCSEEEEEC--SSHHHHHHHHHTTC-SEEECTTSCHHHHHHTTCSCCEEEEEECSCH-
T ss_pred EEEEECCCCHHHHHHHHHHHHhcCCEEEEEe--CCHHHHHHHHHcCC-CEEEeCCCCHHHHHHHhcCCCceEEEECCCc-
Confidence 348887 4 448888899873 78898844 43445556666663 3332211111 1133579988864321
Q ss_pred ccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 310 NWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 310 ~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
...+.++.+.|++||.+++.
T Consensus 250 --------~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 250 --------DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp --------HHHHHHHHHHSCTTCEEEEC
T ss_pred --------hhhHHHHHHHhcCCCEEEEE
Confidence 13678899999999999765
No 371
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=75.26 E-value=5.2 Score=37.51 Aligned_cols=87 Identities=13% Similarity=0.067 Sum_probs=55.0
Q ss_pred EEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCc--CCCCCCcccEEEEcccccccCCc
Q 047630 240 GLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQR--LPFFDNTLDIVHSMHVLSNWIPT 314 (392)
Q Consensus 240 VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~--Lpf~d~sFDlV~s~~~l~~~~~~ 314 (392)
||=+|+ |.|..+..+++ .|.+|++++. +....+.+.+.|.-..+...... .....+.+|+|+-.-.
T Consensus 150 VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~--~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g------- 220 (324)
T 3nx4_A 150 VVVTGASGGVGSTAVALLHKLGYQVAAVSG--RESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG------- 220 (324)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCCEEEEES--CGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC-------
T ss_pred EEEECCCcHHHHHHHHHHHHcCCEEEEEeC--CHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC-------
Confidence 388886 55888888887 7889988553 34555666666632222211111 1123457898875421
Q ss_pred hhHHHHHHHHHHcccCCcEEEEEe
Q 047630 315 TLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 315 ~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
. ..+.+..+.|++||+++...
T Consensus 221 -~--~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 221 -D--KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp -H--HHHHHHHHTEEEEEEEEECC
T ss_pred -c--HHHHHHHHHHhcCCEEEEEe
Confidence 1 26788999999999997664
No 372
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=75.25 E-value=5.7 Score=38.13 Aligned_cols=89 Identities=11% Similarity=0.124 Sum_probs=52.8
Q ss_pred CCcccEEEEEcCCc-chHHHHHHH-cCCEEEEEecCCC-chhHHHHHhcCCccEEEeccCcCCCC------CCcccEEEE
Q 047630 234 PGTIRIGLDIGGGV-ATFAVRMME-RNITIVTTSMNLN-GPFNNFIASRGVVPLYISISQRLPFF------DNTLDIVHS 304 (392)
Q Consensus 234 ~~~ir~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~-a~~~~~aa~rg~i~~~~~d~~~Lpf~------d~sFDlV~s 304 (392)
+.++ |-+|+|. |..+..+++ .|..|++++.+.. ....+.+.+.|. ..+ + .. .+. .+.+|+|+.
T Consensus 181 g~~V---lV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga-~~v--~-~~-~~~~~~~~~~~~~d~vid 252 (366)
T 2cdc_A 181 CRKV---LVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKT-NYY--N-SS-NGYDKLKDSVGKFDVIID 252 (366)
T ss_dssp TCEE---EEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTC-EEE--E-CT-TCSHHHHHHHCCEEEEEE
T ss_pred CCEE---EEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCC-cee--c-hH-HHHHHHHHhCCCCCEEEE
Confidence 5555 9999743 556666665 6888888653320 034445555563 333 3 22 221 146899987
Q ss_pred cccccccCCchhHHHHH-HHHHHcccCCcEEEEEee
Q 047630 305 MHVLSNWIPTTLLHFLM-FDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 305 ~~~l~~~~~~~~l~~~L-~el~RvLKPGG~lii~~~ 339 (392)
.-... ..+ +++.+.|++||.+++...
T Consensus 253 ~~g~~---------~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 253 ATGAD---------VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCCCC---------THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCCh---------HHHHHHHHHHHhcCCEEEEEec
Confidence 54321 145 888999999999976643
No 373
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=75.20 E-value=4.5 Score=38.04 Aligned_cols=93 Identities=16% Similarity=0.161 Sum_probs=54.8
Q ss_pred HhhCCCCcccEEEEEc-CC-cchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCc-CCCCCCcccEEEE
Q 047630 229 LATKKPGTIRIGLDIG-GG-VATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQR-LPFFDNTLDIVHS 304 (392)
Q Consensus 229 l~l~~~~~ir~VLDIG-CG-tG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~-Lpf~d~sFDlV~s 304 (392)
..+.++.++ |=+| +| .|..+..+++ .|.++++++ +....+.+.+.|.-..+.....+ +.-.-..+|+|+-
T Consensus 148 ~~~~~g~~v---lV~Ga~G~vG~~a~q~a~~~Ga~vi~~~---~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 148 AEVKQGDVV---LIHAGAGGVGHLAIQLAKQKGTTVITTA---SKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp TTCCTTCEE---EESSTTSHHHHHHHHHHHHTTCEEEEEE---CHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEE
T ss_pred cCCCCCCEE---EEEcCCcHHHHHHHHHHHHcCCEEEEEe---ccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEE
Confidence 345565555 8776 44 4778888877 688888754 23444455555642232221111 1111146898886
Q ss_pred cccccccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 305 MHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 305 ~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
.-.- ..+.+..+.|++||.++..
T Consensus 222 ~~g~----------~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 222 LVGG----------DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp SSCH----------HHHHHHGGGEEEEEEEEEC
T ss_pred CCCc----------HHHHHHHHhccCCCEEEEe
Confidence 4321 1237888999999999765
No 374
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=74.99 E-value=15 Score=34.55 Aligned_cols=68 Identities=13% Similarity=0.011 Sum_probs=43.2
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEE-EEecCCCchhHHHHHhc-CCccEEEeccCcCCCC----CCcccEEEEcc
Q 047630 239 IGLDIGGGVATFAVRMMERNITIV-TTSMNLNGPFNNFIASR-GVVPLYISISQRLPFF----DNTLDIVHSMH 306 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vv-g~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~----d~sFDlV~s~~ 306 (392)
+++|+-||.|.+...+.+.|..+. ...+|++....+....+ ....++.+|+..+... .+.+|+++...
T Consensus 18 ~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~ggp 91 (295)
T 2qrv_A 18 RVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGS 91 (295)
T ss_dssp EEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEECC
T ss_pred EEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEecC
Confidence 359999999999999999887762 22355533333322222 2234677887776421 13689999864
No 375
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=74.62 E-value=5.5 Score=37.92 Aligned_cols=90 Identities=17% Similarity=0.225 Sum_probs=53.3
Q ss_pred CCCcccEEEEEc-CC-cchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC-----CCCCCcccEEEE
Q 047630 233 KPGTIRIGLDIG-GG-VATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-----PFFDNTLDIVHS 304 (392)
Q Consensus 233 ~~~~ir~VLDIG-CG-tG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-----pf~d~sFDlV~s 304 (392)
++.++ |=+| +| .|..+..+++ .|.+|++++ .+....+.+.+.|. ..+....+++ ....+.+|+|+.
T Consensus 150 ~g~~V---lV~gg~G~vG~~a~qla~~~Ga~Vi~~~--~~~~~~~~~~~lGa-~~vi~~~~~~~~~~~~~~~~g~Dvv~d 223 (346)
T 3fbg_A 150 EGKTL---LIINGAGGVGSIATQIAKAYGLRVITTA--SRNETIEWTKKMGA-DIVLNHKESLLNQFKTQGIELVDYVFC 223 (346)
T ss_dssp TTCEE---EEESTTSHHHHHHHHHHHHTTCEEEEEC--CSHHHHHHHHHHTC-SEEECTTSCHHHHHHHHTCCCEEEEEE
T ss_pred CCCEE---EEEcCCCHHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHhcCC-cEEEECCccHHHHHHHhCCCCccEEEE
Confidence 44444 8774 43 4777777777 788988854 43445555656563 3222211111 012346998886
Q ss_pred cccccccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 305 MHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 305 ~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
.-.- ...+..+.+.|++||.++..
T Consensus 224 ~~g~---------~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 224 TFNT---------DMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp SSCH---------HHHHHHHHHHEEEEEEEEES
T ss_pred CCCc---------hHHHHHHHHHhccCCEEEEE
Confidence 4321 23678888999999999653
No 376
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=74.45 E-value=3 Score=40.02 Aligned_cols=84 Identities=17% Similarity=0.172 Sum_probs=50.4
Q ss_pred EEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC--------CCCCcccEEEEcccc
Q 047630 240 GLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP--------FFDNTLDIVHSMHVL 308 (392)
Q Consensus 240 VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp--------f~d~sFDlV~s~~~l 308 (392)
||-.|+ |.|..+..+++ .|..|++++.+ ....+.+.+.|. ..... ..+-. .....+|+|+.+-.-
T Consensus 174 vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~--~~~~~~~~~~ga-~~~~d-~~~~~~~~~~~~~~~~~~~D~vi~~~G~ 249 (351)
T 1yb5_A 174 VLVHGASGGVGLAACQIARAYGLKILGTAGT--EEGQKIVLQNGA-HEVFN-HREVNYIDKIKKYVGEKGIDIIIEMLAN 249 (351)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESS--HHHHHHHHHTTC-SEEEE-TTSTTHHHHHHHHHCTTCEEEEEESCHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCC--hhHHHHHHHcCC-CEEEe-CCCchHHHHHHHHcCCCCcEEEEECCCh
Confidence 499996 45667666665 78898885533 344444555553 32221 11111 112368998865431
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
..+.+..+.|++||.+++.
T Consensus 250 ----------~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 250 ----------VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp ----------HHHHHHHHHEEEEEEEEEC
T ss_pred ----------HHHHHHHHhccCCCEEEEE
Confidence 2467788999999999764
No 377
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=73.32 E-value=66 Score=30.76 Aligned_cols=139 Identities=11% Similarity=0.042 Sum_probs=77.4
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcC-CEEEEEecCCCchhHH----HHHh-----------------
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERN-ITIVTTSMNLNGPFNN----FIAS----------------- 278 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g-~~vvg~~iD~~a~~~~----~aa~----------------- 278 (392)
.+..+.+.+.-.+ ..+.|+-+|||.=....++...+ ..+..+++|. ++..+ .+.+
T Consensus 77 iD~~v~~fl~~~~--~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~ 153 (334)
T 3iei_A 77 VSQLIKAFLRKTE--CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTL 153 (334)
T ss_dssp HHHHHHHHHHHTT--TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSC
T ss_pred HHHHHHHHHHhCC--CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhccccccccc
Confidence 4445555454321 13345999999999888888752 2334445776 43332 1111
Q ss_pred --------cCCccEEEeccCcC----------CCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec
Q 047630 279 --------RGVVPLYISISQRL----------PFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 279 --------rg~i~~~~~d~~~L----------pf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~ 340 (392)
.....++-.|..+. .+..+.--++++-.++.+ .+++....+|+.+.+... +|.+++.+..
T Consensus 154 ~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~Y-L~~~~~~~ll~~ia~~f~-~~~~i~yE~i 231 (334)
T 3iei_A 154 QMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVY-MTPEQSANLLKWAANSFE-RAMFINYEQV 231 (334)
T ss_dssp BCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGG-SCHHHHHHHHHHHHHHCS-SEEEEEEEEC
T ss_pred ccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhC-CCHHHHHHHHHHHHHhCC-CceEEEEecc
Confidence 11123444454432 132333345666666655 677888899999998775 4555444443
Q ss_pred ccccch-----------------------HHHHHHHHHHcCCeEEEE
Q 047630 341 CVGAQL-----------------------EDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 341 ~~~~~l-----------------------~~~l~~ll~~aGf~~i~w 364 (392)
...+.. .+...+.+.++||+.+..
T Consensus 232 ~p~d~fg~~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~ 278 (334)
T 3iei_A 232 NMGDRFGQIMIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASA 278 (334)
T ss_dssp CTTSHHHHHHHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEE
T ss_pred CCCCHHHHHHHHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCccee
Confidence 222111 344577788889987653
No 378
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=73.18 E-value=11 Score=36.29 Aligned_cols=86 Identities=19% Similarity=0.183 Sum_probs=53.2
Q ss_pred EEEEcCC--cchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC-----CCCCCcccEEEEccccccc
Q 047630 240 GLDIGGG--VATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-----PFFDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 240 VLDIGCG--tG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-----pf~d~sFDlV~s~~~l~~~ 311 (392)
||=+|++ .|..+..+++ .|..|+++. +....+.+.+.|...++.....++ ...++.+|+|+-.-.-
T Consensus 168 VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~--- 241 (371)
T 3gqv_A 168 VLVYGGSTATATVTMQMLRLSGYIPIATC---SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN--- 241 (371)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEE---CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS---
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEe---CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc---
Confidence 3888883 6888888887 788888753 345556666667423332211111 1123459998864331
Q ss_pred CCchhHHHHHHHHHHcc-cCCcEEEEE
Q 047630 312 IPTTLLHFLMFDIYRVL-RPGGLFWLD 337 (392)
Q Consensus 312 ~~~~~l~~~L~el~RvL-KPGG~lii~ 337 (392)
...+..+.+.| |+||+++..
T Consensus 242 ------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 242 ------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp ------HHHHHHHHHHSCTTCEEEEES
T ss_pred ------hHHHHHHHHHhhcCCCEEEEE
Confidence 13567788888 699999764
No 379
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=72.16 E-value=4.5 Score=40.24 Aligned_cols=92 Identities=14% Similarity=0.068 Sum_probs=55.7
Q ss_pred CCCCcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC---------------
Q 047630 232 KKPGTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP--------------- 293 (392)
Q Consensus 232 ~~~~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp--------------- 293 (392)
.++.+| |=+|+ |.|.++..+++ .|..+++++ .+....+.+.+.|...++.....++.
T Consensus 227 ~~g~~V---lV~GasG~vG~~avqlak~~Ga~vi~~~--~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~ 301 (456)
T 3krt_A 227 KQGDNV---LIWGASGGLGSYATQFALAGGANPICVV--SSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKR 301 (456)
T ss_dssp CTTCEE---EETTTTSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred CCCCEE---EEECCCCHHHHHHHHHHHHcCCeEEEEE--CCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHH
Confidence 344444 88886 45778888877 788888855 33455556666664222222111110
Q ss_pred --------CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 294 --------FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 294 --------f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
.....+|+|+-.-.- ..+....++|++||.+++..
T Consensus 302 ~~~~i~~~t~g~g~Dvvid~~G~----------~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 302 FGKRIRELTGGEDIDIVFEHPGR----------ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHTSCCEEEEEECSCH----------HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHhCCCCCcEEEEcCCc----------hhHHHHHHHhhCCcEEEEEe
Confidence 012468988864321 35788889999999997653
No 380
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=71.80 E-value=5.7 Score=37.99 Aligned_cols=87 Identities=13% Similarity=0.039 Sum_probs=50.8
Q ss_pred EEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEe-ccCcC-----C-CCCCcccEEEEccccc
Q 047630 240 GLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYIS-ISQRL-----P-FFDNTLDIVHSMHVLS 309 (392)
Q Consensus 240 VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~-d~~~L-----p-f~d~sFDlV~s~~~l~ 309 (392)
||-.|+ |.|..+..+++ .|..|++++.+ ....+.+.+.|. ..... ...++ . .....+|+|+.+-.-
T Consensus 166 vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~--~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~- 241 (354)
T 2j8z_A 166 VLIHAGLSGVGTAAIQLTRMAGAIPLVTAGS--QKKLQMAEKLGA-AAGFNYKKEDFSEATLKFTKGAGVNLILDCIGG- 241 (354)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHTC-SEEEETTTSCHHHHHHHHTTTSCEEEEEESSCG-
T ss_pred EEEECCccHHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHcCC-cEEEecCChHHHHHHHHHhcCCCceEEEECCCc-
Confidence 488884 55666666665 78898885533 344444544453 22221 11110 0 112469999865432
Q ss_pred ccCCchhHHHHHHHHHHcccCCcEEEEEee
Q 047630 310 NWIPTTLLHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 310 ~~~~~~~l~~~L~el~RvLKPGG~lii~~~ 339 (392)
. .+.+..++|++||.+++...
T Consensus 242 -----~----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 242 -----S----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp -----G----GHHHHHHHEEEEEEEEECCC
T ss_pred -----h----HHHHHHHhccCCCEEEEEec
Confidence 1 35677899999999977643
No 381
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=71.24 E-value=6.2 Score=37.23 Aligned_cols=85 Identities=15% Similarity=0.013 Sum_probs=51.0
Q ss_pred EEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC--------CCCCcccEEEEcccc
Q 047630 240 GLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP--------FFDNTLDIVHSMHVL 308 (392)
Q Consensus 240 VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp--------f~d~sFDlV~s~~~l 308 (392)
||-.|+ |.|..+..++. .|.+|++++.+ ....+.+.+.|. .... +...-. .....+|+|+.+-.-
T Consensus 149 vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~--~~~~~~~~~~g~-~~~~-d~~~~~~~~~i~~~~~~~~~d~vi~~~g~ 224 (333)
T 1wly_A 149 VLIHAAAGGMGHIMVPWARHLGATVIGTVST--EEKAETARKLGC-HHTI-NYSTQDFAEVVREITGGKGVDVVYDSIGK 224 (333)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESS--HHHHHHHHHHTC-SEEE-ETTTSCHHHHHHHHHTTCCEEEEEECSCT
T ss_pred EEEECCccHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHcCC-CEEE-ECCCHHHHHHHHHHhCCCCCeEEEECCcH
Confidence 488984 66777766665 78898885533 334444444453 2222 111111 012358999865432
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
..+..+.+.|++||.++...
T Consensus 225 ----------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 225 ----------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp ----------TTHHHHHHTEEEEEEEEECC
T ss_pred ----------HHHHHHHHhhccCCEEEEEe
Confidence 14678889999999987653
No 382
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=71.18 E-value=26 Score=33.08 Aligned_cols=88 Identities=14% Similarity=0.089 Sum_probs=55.2
Q ss_pred cEEEEEcCCc--chHHHHHHHcCC--EEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCC
Q 047630 238 RIGLDIGGGV--ATFAVRMMERNI--TIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIP 313 (392)
Q Consensus 238 r~VLDIGCGt--G~~a~~La~~g~--~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~ 313 (392)
.+|.=||+|. |.++..|++.|. +|++ .|.+....+.+.+.|.+.-...+...+ .-...|+|+..-.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~--~dr~~~~~~~a~~~G~~~~~~~~~~~~--~~~~aDvVilavp------ 103 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYG--YDINPESISKAVDLGIIDEGTTSIAKV--EDFSPDFVMLSSP------ 103 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEE--ECSCHHHHHHHHHTTSCSEEESCTTGG--GGGCCSEEEECSC------
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEE--EECCHHHHHHHHHCCCcchhcCCHHHH--hhccCCEEEEeCC------
Confidence 3447889885 346777888888 8888 455445555666667543333333320 1134688886532
Q ss_pred chhHHHHHHHHHHcccCCcEEE
Q 047630 314 TTLLHFLMFDIYRVLRPGGLFW 335 (392)
Q Consensus 314 ~~~l~~~L~el~RvLKPGG~li 335 (392)
......++.++...+++|.+++
T Consensus 104 ~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 104 VRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp GGGHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHHHhhccCCCcEEE
Confidence 2345678899999999987553
No 383
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=70.81 E-value=4.3 Score=38.83 Aligned_cols=93 Identities=14% Similarity=0.050 Sum_probs=54.1
Q ss_pred hCCCCcccEEEEEc--CCcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC-----CCCCcccEE
Q 047630 231 TKKPGTIRIGLDIG--GGVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP-----FFDNTLDIV 302 (392)
Q Consensus 231 l~~~~~ir~VLDIG--CGtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp-----f~d~sFDlV 302 (392)
+.++.++ |-+| .|.|..+..+++ .|.+|++++.+ ....+.+.+.|....+.....++. ...+.+|+|
T Consensus 165 ~~~g~~V---lV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~--~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvv 239 (353)
T 4dup_A 165 LTEGESV---LIHGGTSGIGTTAIQLARAFGAEVYATAGS--TGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDII 239 (353)
T ss_dssp CCTTCEE---EESSTTSHHHHHHHHHHHHTTCEEEEEESS--HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEE
T ss_pred CCCCCEE---EEEcCCCHHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEE
Confidence 3344444 8885 345777777776 78999885533 444555555563222221111110 013469999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+..-.- . .+....+.|++||.+++..
T Consensus 240 id~~g~------~----~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 240 LDMIGA------A----YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EESCCG------G----GHHHHHHTEEEEEEEEECC
T ss_pred EECCCH------H----HHHHHHHHhccCCEEEEEE
Confidence 875432 1 4577889999999987653
No 384
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=70.41 E-value=67 Score=34.10 Aligned_cols=61 Identities=11% Similarity=0.136 Sum_probs=36.0
Q ss_pred HHHHHHcccCCcEEEEEeecc----cccchHHHHHHHHHHcCCeEEEEEEeeccCCC--CcccceeeEE
Q 047630 321 MFDIYRVLRPGGLFWLDHFFC----VGAQLEDVYVPLIESVGFNKLKWVVGRKLDRG--PELREMYLSA 383 (392)
Q Consensus 321 L~el~RvLKPGG~lii~~~~~----~~~~l~~~l~~ll~~aGf~~i~w~~~~k~d~~--~~~~e~ylsa 383 (392)
+.++.+.+||- +|++..... ......+.+.+.+++.||. +.|.+....+.| .....+|+.+
T Consensus 416 ~~riv~~~rPk-~fvlENV~glls~~~g~~~~~il~~l~~lGY~-v~~~vLnA~dyGVPQ~R~Rvfivg 482 (784)
T 4ft4_B 416 FMDIVAYLKPK-YVLMENVVDILKFADGYLGKYALSCLVAMKYQ-ARLGMMVAGCYGLPQFRMRVFLWG 482 (784)
T ss_dssp HHHHHHHHCCS-EEEEEEEGGGGTGGGGHHHHHHHHHHHHTTCE-EEEEEEEGGGGTCSSCCEEEEEEE
T ss_pred HHHHHHHHCCC-EEEEEecCCccccccchHHHHHHHHHHhCCCe-eeeeecCHHHcCCCcccccceeee
Confidence 34455667885 445555421 2233455677888999997 567777766654 3444566533
No 385
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=70.15 E-value=9.7 Score=36.24 Aligned_cols=93 Identities=10% Similarity=-0.013 Sum_probs=53.9
Q ss_pred hhCCC--CcccEEEEEcC--CcchHHHHHHH-cCC-EEEEEecCCCchhHHHHHh-cCCccEEEe-ccCcC-----CCCC
Q 047630 230 ATKKP--GTIRIGLDIGG--GVATFAVRMME-RNI-TIVTTSMNLNGPFNNFIAS-RGVVPLYIS-ISQRL-----PFFD 296 (392)
Q Consensus 230 ~l~~~--~~ir~VLDIGC--GtG~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~-rg~i~~~~~-d~~~L-----pf~d 296 (392)
.+.++ .++ |-.|+ |.|..+..+++ .|. .|++++.+ ....+.+.+ .|. ..... ....+ ....
T Consensus 155 ~~~~g~~~~v---lI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~--~~~~~~~~~~~g~-~~~~d~~~~~~~~~~~~~~~ 228 (357)
T 2zb4_A 155 HITAGSNKTM---VVSGAAGACGSVAGQIGHFLGCSRVVGICGT--HEKCILLTSELGF-DAAINYKKDNVAEQLRESCP 228 (357)
T ss_dssp CCCTTSCCEE---EESSTTBHHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHHTSCC-SEEEETTTSCHHHHHHHHCT
T ss_pred CCCCCCccEE---EEECCCcHHHHHHHHHHHHCCCCeEEEEeCC--HHHHHHHHHHcCC-ceEEecCchHHHHHHHHhcC
Confidence 34555 444 88997 45666666665 788 88885532 334444444 453 32221 11110 0112
Q ss_pred CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+.+|+|+.+-.- ..+....+.|++||++++..
T Consensus 229 ~~~d~vi~~~G~----------~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 229 AGVDVYFDNVGG----------NISDTVISQMNENSHIILCG 260 (357)
T ss_dssp TCEEEEEESCCH----------HHHHHHHHTEEEEEEEEECC
T ss_pred CCCCEEEECCCH----------HHHHHHHHHhccCcEEEEEC
Confidence 268988865431 36788899999999997653
No 386
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=69.54 E-value=7.8 Score=38.27 Aligned_cols=93 Identities=15% Similarity=0.073 Sum_probs=55.1
Q ss_pred hCCCCcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC--------------
Q 047630 231 TKKPGTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP-------------- 293 (392)
Q Consensus 231 l~~~~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp-------------- 293 (392)
+.++.++ |=+|+ |.|..+..+++ .|..+++++ .+....+.+.+.|.-..+.....++.
T Consensus 218 ~~~g~~V---lV~GasG~iG~~a~qla~~~Ga~vi~~~--~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~ 292 (447)
T 4a0s_A 218 MKQGDIV---LIWGASGGLGSYAIQFVKNGGGIPVAVV--SSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETG 292 (447)
T ss_dssp CCTTCEE---EETTTTSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHH
T ss_pred CCCCCEE---EEECCCCHHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHhcCCCEEEecccccccccccccccccchhh
Confidence 3344444 88886 44777777776 788888855 33445555655564233322111110
Q ss_pred ---------CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 294 ---------FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 294 ---------f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
.....+|+|+-.-.- ..+....+.|++||.+++..
T Consensus 293 ~~~~~~v~~~~g~g~Dvvid~~G~----------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 293 RKLAKLVVEKAGREPDIVFEHTGR----------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHSSCCSEEEECSCH----------HHHHHHHHHSCTTCEEEESC
T ss_pred hHHHHHHHHHhCCCceEEEECCCc----------hHHHHHHHHHhcCCEEEEEe
Confidence 012468998865331 25678889999999997653
No 387
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=69.41 E-value=3.4 Score=34.82 Aligned_cols=43 Identities=14% Similarity=0.155 Sum_probs=30.0
Q ss_pred CCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEE
Q 047630 293 PFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWL 336 (392)
Q Consensus 293 pf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii 336 (392)
.+++++||.|+-..--.. ....-...++..+.+.|||||.|..
T Consensus 54 sLp~stYD~V~~lt~~~~-~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQ-TDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSS-CSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCcc-chhhcCHHHHHHHHHHhCCCCEEEe
Confidence 457899999986543221 0011115799999999999999976
No 388
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=68.87 E-value=6.6 Score=36.95 Aligned_cols=87 Identities=16% Similarity=0.150 Sum_probs=52.8
Q ss_pred EEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEe-cc--CcC-CCCCCcccEEEEcccccccC
Q 047630 240 GLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYIS-IS--QRL-PFFDNTLDIVHSMHVLSNWI 312 (392)
Q Consensus 240 VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~-d~--~~L-pf~d~sFDlV~s~~~l~~~~ 312 (392)
||-+|+ |.|..+..+++ .|.++++++.+ ....+.+.+.|.-..+.. +. +.+ ....+.+|+|+-.-.-
T Consensus 154 VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~--~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~---- 227 (330)
T 1tt7_A 154 VLVTGATGGVGGIAVSMLNKRGYDVVASTGN--REAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG---- 227 (330)
T ss_dssp EEEESTTSHHHHHHHHHHHHHTCCEEEEESS--SSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT----
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcH----
Confidence 499996 45777777776 68888885543 344455555563222211 11 111 1223468988864321
Q ss_pred CchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 313 PTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 313 ~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
..+.+..+.|++||++++..
T Consensus 228 ------~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 228 ------KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp ------HHHHHHHTTEEEEEEEEECC
T ss_pred ------HHHHHHHHhhcCCCEEEEEe
Confidence 25688889999999997654
No 389
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=68.74 E-value=5.2 Score=38.29 Aligned_cols=94 Identities=14% Similarity=0.072 Sum_probs=53.2
Q ss_pred hC-CCCcccEEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHH-hcCCccEEEecc-CcCCCCCCcccEEEEc
Q 047630 231 TK-KPGTIRIGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIA-SRGVVPLYISIS-QRLPFFDNTLDIVHSM 305 (392)
Q Consensus 231 l~-~~~~ir~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa-~rg~i~~~~~d~-~~Lpf~d~sFDlV~s~ 305 (392)
+. ++.++ |=+|+|. |..+..+++ .|..|++++.+ ....+.+. +-|.-.++.... ..+.-..+.+|+|+-.
T Consensus 177 ~~~~g~~V---lV~GaG~vG~~a~qlak~~Ga~Vi~~~~~--~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~ 251 (357)
T 2cf5_A 177 LKQPGLRG---GILGLGGVGHMGVKIAKAMGHHVTVISSS--NKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDT 251 (357)
T ss_dssp TTSTTCEE---EEECCSHHHHHHHHHHHHHTCEEEEEESS--TTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEEC
T ss_pred CCCCCCEE---EEECCCHHHHHHHHHHHHCCCeEEEEeCC--hHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEEC
Confidence 44 55555 7788763 667777776 68888885533 34444444 445323322111 0110011368999865
Q ss_pred ccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 306 HVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 306 ~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
-.-.. .+....+.|++||.++...
T Consensus 252 ~g~~~---------~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 252 VPVHH---------ALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp CCSCC---------CSHHHHTTEEEEEEEEECS
T ss_pred CCChH---------HHHHHHHHhccCCEEEEeC
Confidence 43211 2466778999999997654
No 390
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=67.71 E-value=1.3e+02 Score=34.48 Aligned_cols=140 Identities=13% Similarity=0.175 Sum_probs=76.6
Q ss_pred EEEEEcCCcchHHHHHHHcCC-E-EEEEecCCCchhHHHHHhc-CCccEEEeccC-----------------cCCCCCCc
Q 047630 239 IGLDIGGGVATFAVRMMERNI-T-IVTTSMNLNGPFNNFIASR-GVVPLYISISQ-----------------RLPFFDNT 298 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~-~-vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~-----------------~Lpf~d~s 298 (392)
+++|+-||.|.+..-|.+.|. . +.+ +|++....+....+ ....++.+|+. .+|. .+.
T Consensus 853 ~viDLFsG~GGlslGfe~AG~~~vv~a--vEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~-~~~ 929 (1330)
T 3av4_A 853 RTLDVFSGCGGLSEGFHQAGISETLWA--IEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQ-KGD 929 (1330)
T ss_dssp EEEEETCTTSHHHHHHHHTTSEEEEEE--ECCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTTTCSBCSSCCBCCC-TTT
T ss_pred eEEecccCccHHHHHHHHCCCCceEEE--EECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhccchhhhhhhhccc-cCc
Confidence 459999999999999999997 4 445 45533333322222 22234444322 1221 246
Q ss_pred ccEEEEcccccccCCc-----hh----HHHHHH---HHHHcccCCcEEEEEeeccc----ccchHHHHHHHHHHcCCeEE
Q 047630 299 LDIVHSMHVLSNWIPT-----TL----LHFLMF---DIYRVLRPGGLFWLDHFFCV----GAQLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~-----~~----l~~~L~---el~RvLKPGG~lii~~~~~~----~~~l~~~l~~ll~~aGf~~i 362 (392)
+|+|+....-..+... .. ...++. ++.+.++|- +|++.....- .....+.+...+++.||. +
T Consensus 930 vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~rPk-~fv~ENV~glls~~~g~~~~~il~~L~~lGY~-v 1007 (1330)
T 3av4_A 930 VEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPR-FFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQ-C 1007 (1330)
T ss_dssp CSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHCCS-EEEEEEEGGGGTTTTTHHHHHHHHHHHHHTCE-E
T ss_pred cceEEecCCCcccccccccccccccchhhHHHHHHHHHHHHhcCc-EEEEeccHHHhccCccHHHHHHHHHHHhcCCe-e
Confidence 8999976443332110 00 112333 344456785 5556654321 223345577788999997 4
Q ss_pred EEEEeeccCCC--CcccceeeEE
Q 047630 363 KWVVGRKLDRG--PELREMYLSA 383 (392)
Q Consensus 363 ~w~~~~k~d~~--~~~~e~ylsa 383 (392)
.|.+....+.| .....+|+.+
T Consensus 1008 ~~~vLnA~dyGVPQ~R~Rvfivg 1030 (1330)
T 3av4_A 1008 TFGVLQAGQYGVAQTRRRAIILA 1030 (1330)
T ss_dssp EEEEEEGGGGSCSBCCEEEEEEE
T ss_pred eEEEecHHHcCCCccccEEEEEE
Confidence 67777766654 3444565544
No 391
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=67.60 E-value=33 Score=31.05 Aligned_cols=83 Identities=14% Similarity=0.066 Sum_probs=50.4
Q ss_pred EEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhHH
Q 047630 241 LDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLH 318 (392)
Q Consensus 241 LDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~ 318 (392)
.=||+|. | .++..|.+.|.+|+++ |.+....+.+.+.|.......+.... ...|+|+..-. .....
T Consensus 4 ~iiG~G~~G~~~a~~l~~~g~~V~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~D~vi~av~------~~~~~ 71 (279)
T 2f1k_A 4 GVVGLGLIGASLAGDLRRRGHYLIGV--SRQQSTCEKAVERQLVDEAGQDLSLL----QTAKIIFLCTP------IQLIL 71 (279)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHHTTSCSEEESCGGGG----TTCSEEEECSC------HHHHH
T ss_pred EEEcCcHHHHHHHHHHHHCCCEEEEE--ECCHHHHHHHHhCCCCccccCCHHHh----CCCCEEEEECC------HHHHH
Confidence 6688875 3 3566677788888884 55444444555555422222333332 35798886532 23456
Q ss_pred HHHHHHHHcccCCcEEE
Q 047630 319 FLMFDIYRVLRPGGLFW 335 (392)
Q Consensus 319 ~~L~el~RvLKPGG~li 335 (392)
.++.++...+++|..++
T Consensus 72 ~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 72 PTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHhhCCCCCEEE
Confidence 78888888898877553
No 392
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=67.31 E-value=62 Score=28.90 Aligned_cols=64 Identities=14% Similarity=0.024 Sum_probs=41.5
Q ss_pred EEEEcCCcchHHHHHH----HcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccc
Q 047630 240 GLDIGGGVATFAVRMM----ERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 240 VLDIGCGtG~~a~~La----~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
||=.|+ |.++..++ +.|.+|++++-+ ..........+ ++++.+|..++. -..+|+|+.......
T Consensus 8 ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~--~~~~~~~~~~~-~~~~~~D~~d~~--~~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 8 LLSFGH--GYTARVLSRALAPQGWRIIGTSRN--PDQMEAIRASG-AEPLLWPGEEPS--LDGVTHLLISTAPDS 75 (286)
T ss_dssp EEEETC--CHHHHHHHHHHGGGTCEEEEEESC--GGGHHHHHHTT-EEEEESSSSCCC--CTTCCEEEECCCCBT
T ss_pred EEEECC--cHHHHHHHHHHHHCCCEEEEEEcC--hhhhhhHhhCC-CeEEEecccccc--cCCCCEEEECCCccc
Confidence 488894 77665554 478999985533 33333333344 688888888766 456899987665443
No 393
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=66.75 E-value=17 Score=34.15 Aligned_cols=97 Identities=10% Similarity=0.043 Sum_probs=55.7
Q ss_pred hhCCCCcccEEEEEcCCc-chHHHHHHH-cCCE-EEEEecCCCchhHHHHHhcCCccEEEeccCcCC------CCCCccc
Q 047630 230 ATKKPGTIRIGLDIGGGV-ATFAVRMME-RNIT-IVTTSMNLNGPFNNFIASRGVVPLYISISQRLP------FFDNTLD 300 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGt-G~~a~~La~-~g~~-vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp------f~d~sFD 300 (392)
...++.++ |=.|+|. |.++..+++ .|.. ++++ +.+....+.+.+-|....+.......+ .....+|
T Consensus 157 ~~~~g~~V---lV~GaG~vG~~aiq~ak~~G~~~vi~~--~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 157 QGCENKNV---IIIGAGTIGLLAIQCAVALGAKSVTAI--DISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp TCCTTSEE---EEECCSHHHHHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSE
T ss_pred ccCCCCEE---EEECCCCcchHHHHHHHHcCCcEEEEE--echHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcc
Confidence 34455555 7788875 556666666 5655 4553 443455556666674333332211110 0124477
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeec
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~ 340 (392)
+|+..-.- ...+....++|++||.+++....
T Consensus 232 ~v~d~~G~---------~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 232 LILETAGV---------PQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp EEEECSCS---------HHHHHHHHHHCCTTCEEEECCCC
T ss_pred cccccccc---------cchhhhhhheecCCeEEEEEecc
Confidence 77654321 13678888999999999776543
No 394
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=66.66 E-value=67 Score=33.56 Aligned_cols=140 Identities=7% Similarity=0.087 Sum_probs=79.4
Q ss_pred HHHHHHHHHhhCCCCcccEEEEEcCCcchHHHHHHHcCC--------EEEEEecCCCchhHH----HHHhcC--------
Q 047630 221 LDFSIDEVLATKKPGTIRIGLDIGGGVATFAVRMMERNI--------TIVTTSMNLNGPFNN----FIASRG-------- 280 (392)
Q Consensus 221 ~~~lI~~ll~l~~~~~ir~VLDIGCGtG~~a~~La~~g~--------~vvg~~iD~~a~~~~----~aa~rg-------- 280 (392)
.+.++++.+........+.|+-+|||.=..+.+|...+. .+..+++|. ++..+ .+.+..
T Consensus 92 ~d~~v~~fl~~~~~~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~ 170 (695)
T 2zwa_A 92 IRSRLNSIIEQTPQDKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGL 170 (695)
T ss_dssp HHHHHHHHHHHSCTTSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTC
T ss_pred HHHHHHHHHhcccCCCCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhcc
Confidence 455666666443112346679999999999999876522 456666777 43332 111100
Q ss_pred ------------------CccEEEeccCcC----------CC-CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCC
Q 047630 281 ------------------VVPLYISISQRL----------PF-FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPG 331 (392)
Q Consensus 281 ------------------~i~~~~~d~~~L----------pf-~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPG 331 (392)
...++-.|..+. .+ ..+.--++++-.++.+ .+++...++|+.+.+. ++
T Consensus 171 ~~~~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Y-l~~~~~~~ll~~~~~~--~~ 247 (695)
T 2zwa_A 171 SEDKDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAY-MKPERSDSIIEATSKM--EN 247 (695)
T ss_dssp CSSCSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGG-SCHHHHHHHHHHHHTS--SS
T ss_pred ccccccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEE-cCHHHHHHHHHHHhhC--CC
Confidence 123344454432 11 2222334445555544 6888888999988864 67
Q ss_pred cEEEEEeecccc---cc-----------------------hHHHHHHHHHHcCCeEEEE
Q 047630 332 GLFWLDHFFCVG---AQ-----------------------LEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 332 G~lii~~~~~~~---~~-----------------------l~~~l~~ll~~aGf~~i~w 364 (392)
|.+++.+..... +. -.+...+.+.+.||+.+..
T Consensus 248 ~~~~~~e~~~~~~~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~ 306 (695)
T 2zwa_A 248 SHFIILEQLIPKGPFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNV 306 (695)
T ss_dssp EEEEEEEECCTTCTTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEEEeecCCCCCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcce
Confidence 777665533221 00 0445777888889976543
No 395
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=62.68 E-value=8.1 Score=37.12 Aligned_cols=92 Identities=15% Similarity=0.130 Sum_probs=51.2
Q ss_pred CCCcccEEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHH-hcCCccEEEec-cCcCCCCCCcccEEEEcccc
Q 047630 233 KPGTIRIGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIA-SRGVVPLYISI-SQRLPFFDNTLDIVHSMHVL 308 (392)
Q Consensus 233 ~~~~ir~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa-~rg~i~~~~~d-~~~Lpf~d~sFDlV~s~~~l 308 (392)
++.++ |=+|+|. |..+..+++ .|..|++++ .+....+.+. +.|...++... ...+.-..+.+|+|+..-..
T Consensus 187 ~g~~V---lV~GaG~vG~~~~q~a~~~Ga~Vi~~~--~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 187 PGKHI---GIVGLGGLGHVAVKFAKAFGSKVTVIS--TSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp TTCEE---EEECCSHHHHHHHHHHHHTTCEEEEEE--SCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred CCCEE---EEECCCHHHHHHHHHHHHCCCEEEEEe--CCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence 55555 7788754 666677766 688888855 3334444444 44532222111 00110011369999865432
Q ss_pred cccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 309 SNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 309 ~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
.. .++...+.|++||.++...
T Consensus 262 ~~---------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 262 VH---------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp CC---------CSHHHHHHEEEEEEEEECC
T ss_pred HH---------HHHHHHHHHhcCCEEEEEc
Confidence 11 2356778999999987653
No 396
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=62.67 E-value=5.8 Score=37.63 Aligned_cols=89 Identities=12% Similarity=0.104 Sum_probs=50.9
Q ss_pred CCCcccEEEEEcCCc-chHHHHHHH-cCC-EEEEEecCCCchhHHHHHhcCCccEEEeccCcCCC-------CCCcccEE
Q 047630 233 KPGTIRIGLDIGGGV-ATFAVRMME-RNI-TIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPF-------FDNTLDIV 302 (392)
Q Consensus 233 ~~~~ir~VLDIGCGt-G~~a~~La~-~g~-~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf-------~d~sFDlV 302 (392)
++.++ |-+|+|. |..+..+++ .|. +|++++ .+....+.+.+. ...... ...-.+ ....+|+|
T Consensus 164 ~g~~V---lV~GaG~vG~~~~q~a~~~Ga~~Vi~~~--~~~~~~~~~~~l--a~~v~~-~~~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSV---LITGAGPIGLMAAMVVRASGAGPILVSD--PNPYRLAFARPY--ADRLVN-PLEEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCE---EEECCSHHHHHHHHHHHHTTCCSEEEEC--SCHHHHGGGTTT--CSEEEC-TTTSCHHHHHHHHHSSCEEEE
T ss_pred CCCEE---EEECCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHh--HHhccC-cCccCHHHHHHHhcCCCCCEE
Confidence 55556 9999754 677777776 688 888844 322222222221 222221 111000 12358999
Q ss_pred EEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 303 HSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 303 ~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+-.-.- ...+++..+.|++||.++...
T Consensus 236 id~~g~---------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 236 LEFSGN---------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp EECSCC---------HHHHHHHHHHEEEEEEEEECC
T ss_pred EECCCC---------HHHHHHHHHHHhcCCEEEEEe
Confidence 865431 135788899999999987653
No 397
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=62.36 E-value=10 Score=35.96 Aligned_cols=38 Identities=21% Similarity=0.158 Sum_probs=28.5
Q ss_pred EEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhc
Q 047630 240 GLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASR 279 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r 279 (392)
|||.-||+|+.+....+.|...+|++++ ......+.+|
T Consensus 256 VlDpF~GsGtt~~aa~~~gr~~ig~e~~--~~~~~~~~~r 293 (323)
T 1boo_A 256 VVDIFGGSNTTGLVAERESRKWISFEMK--PEYVAASAFR 293 (323)
T ss_dssp EEETTCTTCHHHHHHHHTTCEEEEEESC--HHHHHHHHGG
T ss_pred EEECCCCCCHHHHHHHHcCCCEEEEeCC--HHHHHHHHHH
Confidence 5999999999999999999999995544 3444444433
No 398
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=62.09 E-value=25 Score=33.04 Aligned_cols=95 Identities=13% Similarity=0.010 Sum_probs=53.3
Q ss_pred hhCCCCcccEEEEEcCCcc-hHHHHHHH--cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC-----C-CCCCccc
Q 047630 230 ATKKPGTIRIGLDIGGGVA-TFAVRMME--RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-----P-FFDNTLD 300 (392)
Q Consensus 230 ~l~~~~~ir~VLDIGCGtG-~~a~~La~--~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-----p-f~d~sFD 300 (392)
.+.+++++ |=+|+|.+ .++..+++ .+.+|++++ .+....+.+.+.|....+.....+. . .....+|
T Consensus 160 ~~~~g~~V---lV~GaG~~g~~a~~~a~~~~g~~Vi~~~--~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 160 GVKPGDWQ---VIFGAGGLGNLAIQYAKNVFGAKVIAVD--INQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp TCCTTCEE---EEECCSHHHHHHHHHHHHTSCCEEEEEE--SCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred CCCCCCEE---EEEcCCCccHHHHHHHHHhCCCEEEEEE--CcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCce
Confidence 34555665 77898864 45555555 478898855 4344455566666433332211111 0 1123456
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
.++....- ...+....+.|++||.+++..
T Consensus 235 ~~~~~~~~---------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 235 SAIVCAVA---------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEECCSC---------HHHHHHHHHTEEEEEEEEECC
T ss_pred EEEEeccC---------cchhheeheeecCCceEEEEe
Confidence 55543221 136788899999999986654
No 399
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=61.15 E-value=26 Score=33.24 Aligned_cols=93 Identities=9% Similarity=0.039 Sum_probs=51.6
Q ss_pred hCCCCcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCch---hHHHHHhcCCccEEEe------ccCcCCCCCCc
Q 047630 231 TKKPGTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGP---FNNFIASRGVVPLYIS------ISQRLPFFDNT 298 (392)
Q Consensus 231 l~~~~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~---~~~~aa~rg~i~~~~~------d~~~Lpf~d~s 298 (392)
+.++.+| |=+|+ |.|.++..+++ .|..++++. +.+.. ..+.+.+.|.-.++.. ....+.-..+.
T Consensus 165 ~~~g~~V---lV~Ga~G~vG~~aiqlak~~Ga~vi~~~-~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~ 240 (357)
T 1zsy_A 165 LQPGDSV---IQNASNSGVGQAVIQIAAALGLRTINVV-RDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQ 240 (357)
T ss_dssp CCTTCEE---EESSTTSHHHHHHHHHHHHHTCEEEEEE-CCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCC
T ss_pred cCCCCEE---EEeCCcCHHHHHHHHHHHHcCCEEEEEe-cCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCC
Confidence 4455555 88886 56888888887 688776533 22111 2234555563223321 11111111114
Q ss_pred ccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 299 LDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 299 FDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
+|+|+-.-.- . .+.+..+.|++||.+++.
T Consensus 241 ~Dvvid~~g~------~----~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 241 PRLALNCVGG------K----SSTELLRQLARGGTMVTY 269 (357)
T ss_dssp CSEEEESSCH------H----HHHHHHTTSCTTCEEEEC
T ss_pred ceEEEECCCc------H----HHHHHHHhhCCCCEEEEE
Confidence 8988854321 1 224578999999999765
No 400
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=60.94 E-value=83 Score=28.91 Aligned_cols=110 Identities=11% Similarity=0.148 Sum_probs=61.8
Q ss_pred EEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhHH
Q 047630 241 LDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLH 318 (392)
Q Consensus 241 LDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~ 318 (392)
.=||+|. | .++..|++.|.+|++ .|.+....+.+.+.|. .....+..+. -...|+|+..-. ++...+
T Consensus 11 ~iIG~G~mG~~~a~~l~~~G~~V~~--~dr~~~~~~~~~~~g~-~~~~~~~~e~---~~~aDvvi~~vp-----~~~~~~ 79 (303)
T 3g0o_A 11 GIVGLGSMGMGAARSCLRAGLSTWG--ADLNPQACANLLAEGA-CGAAASAREF---AGVVDALVILVV-----NAAQVR 79 (303)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEE--ECSCHHHHHHHHHTTC-SEEESSSTTT---TTTCSEEEECCS-----SHHHHH
T ss_pred EEECCCHHHHHHHHHHHHCCCeEEE--EECCHHHHHHHHHcCC-ccccCCHHHH---HhcCCEEEEECC-----CHHHHH
Confidence 6678875 3 366777778999988 4554555566666664 2223333322 134688886432 223344
Q ss_pred HHH---HHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEE
Q 047630 319 FLM---FDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 319 ~~L---~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~ 363 (392)
.++ .++...+++|..++-.. .........+.+.+.+.|...+.
T Consensus 80 ~v~~~~~~l~~~l~~g~ivv~~s--t~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 80 QVLFGEDGVAHLMKPGSAVMVSS--TISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp HHHC--CCCGGGSCTTCEEEECS--CCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHhChhhHHhhCCCCCEEEecC--CCCHHHHHHHHHHHHHcCCeEEe
Confidence 555 66677888877664332 12222233455666776755443
No 401
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=60.05 E-value=4.5 Score=38.27 Aligned_cols=43 Identities=19% Similarity=0.329 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCe
Q 047630 315 TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFN 360 (392)
Q Consensus 315 ~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~ 360 (392)
+.++.+|..+.++|+|||++.+..|..-++.+ .+..+++.+|+
T Consensus 210 ~~L~~~L~~a~~~L~~gGrl~visfHSLEDRi---VK~~~~~~~~~ 252 (285)
T 1wg8_A 210 NALKEFLEQAAEVLAPGGRLVVIAFHSLEDRV---VKRFLRESGLK 252 (285)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECSHHHHHH---HHHHHHHHCSE
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCcHHHHH---HHHHHHhCCcc
Confidence 56788999999999999999999888766655 33444444444
No 402
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=59.49 E-value=9.2 Score=36.30 Aligned_cols=89 Identities=17% Similarity=0.153 Sum_probs=54.6
Q ss_pred hCCCCcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC------CCCCcccE
Q 047630 231 TKKPGTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP------FFDNTLDI 301 (392)
Q Consensus 231 l~~~~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp------f~d~sFDl 301 (392)
+.++.++ |-+|+ |.|..+..+++ .|..|+++ . +....+.+.+.|. ..+. ...++. .....+|+
T Consensus 148 ~~~g~~V---lV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~--~~~~~~~~~~lGa-~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 148 VQDGQTV---LIQGGGGGVGHVAIQIALARGARVFAT-A--RGSDLEYVRDLGA-TPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp CCTTCEE---EEETTTSHHHHHHHHHHHHTTCEEEEE-E--CHHHHHHHHHHTS-EEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CCCCCEE---EEecCCCHHHHHHHHHHHHCCCEEEEE-e--CHHHHHHHHHcCC-CEec-cCCCHHHHHHHHhcCCCceE
Confidence 3344455 99984 45778877777 78888885 2 2444555555563 3322 222110 12246999
Q ss_pred EEEcccccccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 302 VHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 302 V~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
|+-.-.- ..+....+.|++||.++..
T Consensus 220 vid~~g~----------~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 220 VYDTLGG----------PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EEESSCT----------HHHHHHHHHEEEEEEEEES
T ss_pred EEECCCc----------HHHHHHHHHHhcCCeEEEE
Confidence 8864321 2578888999999999764
No 403
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=57.89 E-value=65 Score=25.61 Aligned_cols=103 Identities=9% Similarity=0.034 Sum_probs=55.1
Q ss_pred EEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC----CCCCcccEEEEcccccccCCc
Q 047630 241 LDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP----FFDNTLDIVHSMHVLSNWIPT 314 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp----f~d~sFDlV~s~~~l~~~~~~ 314 (392)
+=+|+|. |. ++..|.+.|..|+++| .+....+.+.+.+ +.++.+|..+.. ..-..+|+|+.... .
T Consensus 10 ~I~G~G~iG~~la~~L~~~g~~V~~id--~~~~~~~~~~~~~-~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~------~ 80 (141)
T 3llv_A 10 IVIGSEAAGVGLVRELTAAGKKVLAVD--KSKEKIELLEDEG-FDAVIADPTDESFYRSLDLEGVSAVLITGS------D 80 (141)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEEEEE--SCHHHHHHHHHTT-CEEEECCTTCHHHHHHSCCTTCSEEEECCS------C
T ss_pred EEECCCHHHHHHHHHHHHCCCeEEEEE--CCHHHHHHHHHCC-CcEEECCCCCHHHHHhCCcccCCEEEEecC------C
Confidence 8888865 32 4455556799999855 4344445555555 567777754421 12245898886543 1
Q ss_pred hhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCe
Q 047630 315 TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFN 360 (392)
Q Consensus 315 ~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~ 360 (392)
......+....|-+. .+.++...... . ..+.++++|..
T Consensus 81 ~~~n~~~~~~a~~~~-~~~iia~~~~~---~----~~~~l~~~G~~ 118 (141)
T 3llv_A 81 DEFNLKILKALRSVS-DVYAIVRVSSP---K----KKEEFEEAGAN 118 (141)
T ss_dssp HHHHHHHHHHHHHHC-CCCEEEEESCG---G----GHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHhC-CceEEEEEcCh---h----HHHHHHHcCCC
Confidence 222234445555555 44444432111 1 23456777754
No 404
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=57.75 E-value=18 Score=34.73 Aligned_cols=88 Identities=16% Similarity=0.124 Sum_probs=51.1
Q ss_pred EEEEc--CCcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC--C-CCCcccEEEEcccccccCC
Q 047630 240 GLDIG--GGVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP--F-FDNTLDIVHSMHVLSNWIP 313 (392)
Q Consensus 240 VLDIG--CGtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp--f-~d~sFDlV~s~~~l~~~~~ 313 (392)
||=+| .|.|..+..+++ .|.+|++++ + ....+.+.+.|.-..+.....++. . ....+|+|+-.-.-..
T Consensus 187 VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~--~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~--- 260 (375)
T 2vn8_A 187 VLILGASGGVGTFAIQVMKAWDAHVTAVC-S--QDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGST--- 260 (375)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEE-C--GGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTH---
T ss_pred EEEECCCCHHHHHHHHHHHhCCCEEEEEe-C--hHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChh---
Confidence 48888 345778877777 688888755 2 444455555563222221111110 0 1146899986543210
Q ss_pred chhHHHHHHHHHHcccCCcEEEEEe
Q 047630 314 TTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 314 ~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
..+....+.|++||.++...
T Consensus 261 -----~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 261 -----ETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp -----HHHGGGGBCSSSCCEEEESC
T ss_pred -----hhhHHHHHhhcCCcEEEEeC
Confidence 24567778999999997764
No 405
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=54.82 E-value=1.4e+02 Score=27.91 Aligned_cols=67 Identities=16% Similarity=0.177 Sum_probs=42.0
Q ss_pred EEEEcC-Ccch--HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEec-cCcCCCCCCcccEEEEccccc
Q 047630 240 GLDIGG-GVAT--FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISI-SQRLPFFDNTLDIVHSMHVLS 309 (392)
Q Consensus 240 VLDIGC-GtG~--~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d-~~~Lpf~d~sFDlV~s~~~l~ 309 (392)
|+=||- |+|. .+..|.++|..|.+.|.....+......+.| +++..+. ...+ ....+|+|+.+..+.
T Consensus 7 i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~g-i~v~~g~~~~~l--~~~~~d~vV~Spgi~ 77 (326)
T 3eag_A 7 IHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALG-IDVYEGFDAAQL--DEFKADVYVIGNVAK 77 (326)
T ss_dssp EEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTT-CEEEESCCGGGG--GSCCCSEEEECTTCC
T ss_pred EEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCC-CEEECCCCHHHc--CCCCCCEEEECCCcC
Confidence 366776 5565 4566778999999988655334444555666 5666552 2222 113489999887663
No 406
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=53.79 E-value=79 Score=28.51 Aligned_cols=86 Identities=14% Similarity=0.145 Sum_probs=50.0
Q ss_pred EEEEcCCc-c-hHHHHHHHcCC--EEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCC-cccEEEEcccccccCCc
Q 047630 240 GLDIGGGV-A-TFAVRMMERNI--TIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDN-TLDIVHSMHVLSNWIPT 314 (392)
Q Consensus 240 VLDIGCGt-G-~~a~~La~~g~--~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~-sFDlV~s~~~l~~~~~~ 314 (392)
|.=||+|. | .++..+++.|. +|++ .|.+....+.+.+.|.......+.... -. ..|+|+..- +.
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g~~~~V~~--~d~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~aDvVilav------p~ 72 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSGFKGKIYG--YDINPESISKAVDLGIIDEGTTSIAKV---EDFSPDFVMLSS------PV 72 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEE--ECSCHHHHHHHHHTTSCSEEESCGGGG---GGTCCSEEEECS------CH
T ss_pred EEEEecCHHHHHHHHHHHhcCCCcEEEE--EeCCHHHHHHHHHCCCcccccCCHHHH---hcCCCCEEEEcC------CH
Confidence 36688775 3 35666666777 7887 455444445555566432222222221 12 578888643 22
Q ss_pred hhHHHHHHHHHHcccCCcEEEE
Q 047630 315 TLLHFLMFDIYRVLRPGGLFWL 336 (392)
Q Consensus 315 ~~l~~~L~el~RvLKPGG~lii 336 (392)
.....++.++...+++|..++.
T Consensus 73 ~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 73 RTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHHhhCCCCcEEEE
Confidence 3445688888888998875543
No 407
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=52.40 E-value=83 Score=31.78 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=41.5
Q ss_pred EEEcC-Ccch--HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEec-cCcCCCCCCcccEEEEccccc
Q 047630 241 LDIGG-GVAT--FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISI-SQRLPFFDNTLDIVHSMHVLS 309 (392)
Q Consensus 241 LDIGC-GtG~--~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d-~~~Lpf~d~sFDlV~s~~~l~ 309 (392)
.=||- |+|. .+..|.++|..|.+.|.....+..+...+.| +++..+. ...+ ...+|+|+.+..+.
T Consensus 23 ~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~g-i~~~~G~~~~~~---~~~~d~vV~Spgi~ 91 (524)
T 3hn7_A 23 HILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAG-VTIEEGYLIAHL---QPAPDLVVVGNAMK 91 (524)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTT-CEEEESCCGGGG---CSCCSEEEECTTCC
T ss_pred EEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCC-CEEECCCCHHHc---CCCCCEEEECCCcC
Confidence 66764 5565 4666777999999988765344444555667 5776653 2222 13489999887663
No 408
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=52.08 E-value=52 Score=27.59 Aligned_cols=88 Identities=10% Similarity=-0.055 Sum_probs=49.8
Q ss_pred EEEcCCc-ch-HHHHHHHc-CCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC----CC-CCCcccEEEEcccccccC
Q 047630 241 LDIGGGV-AT-FAVRMMER-NITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL----PF-FDNTLDIVHSMHVLSNWI 312 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~-g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L----pf-~d~sFDlV~s~~~l~~~~ 312 (392)
+=+|+|. |. ++..|.+. |..|+++| .+....+.+.+.| +..+.+|..+. .. .-..+|+|+....
T Consensus 43 ~IiG~G~~G~~~a~~L~~~~g~~V~vid--~~~~~~~~~~~~g-~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~----- 114 (183)
T 3c85_A 43 LILGMGRIGTGAYDELRARYGKISLGIE--IREEAAQQHRSEG-RNVISGDATDPDFWERILDTGHVKLVLLAMP----- 114 (183)
T ss_dssp EEECCSHHHHHHHHHHHHHHCSCEEEEE--SCHHHHHHHHHTT-CCEEECCTTCHHHHHTBCSCCCCCEEEECCS-----
T ss_pred EEECCCHHHHHHHHHHHhccCCeEEEEE--CCHHHHHHHHHCC-CCEEEcCCCCHHHHHhccCCCCCCEEEEeCC-----
Confidence 7788764 43 44555567 89998855 4344445555556 46677665431 11 1245898886432
Q ss_pred CchhHHHHHHHHHHcccCCcEEEEE
Q 047630 313 PTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 313 ~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
+... ...+....+.+.|++.++..
T Consensus 115 ~~~~-~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 115 HHQG-NQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp SHHH-HHHHHHHHHHTTCCSEEEEE
T ss_pred ChHH-HHHHHHHHHHHCCCCEEEEE
Confidence 1121 12334456667777777654
No 409
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=52.04 E-value=17 Score=34.50 Aligned_cols=43 Identities=16% Similarity=0.139 Sum_probs=30.7
Q ss_pred HHHHHHHHhh--CCCCcccEEEEEcCCcchHHHHHHHcCCEEEEEecC
Q 047630 222 DFSIDEVLAT--KKPGTIRIGLDIGGGVATFAVRMMERNITIVTTSMN 267 (392)
Q Consensus 222 ~~lI~~ll~l--~~~~~ir~VLDIGCGtG~~a~~La~~g~~vvg~~iD 267 (392)
..+++.++.. .+++. |||.-||+|+.+....+.|...+|++++
T Consensus 229 ~~l~~~~i~~~~~~~~~---vlDpF~GsGtt~~aa~~~~r~~ig~e~~ 273 (319)
T 1eg2_A 229 AAVIERLVRALSHPGST---VLDFFAGSGVTARVAIQEGRNSICTDAA 273 (319)
T ss_dssp HHHHHHHHHHHSCTTCE---EEETTCTTCHHHHHHHHHTCEEEEEESS
T ss_pred HHHHHHHHHHhCCCCCE---EEecCCCCCHHHHHHHHcCCcEEEEECC
Confidence 3345555432 23343 5999999999999999999999985544
No 410
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=51.16 E-value=25 Score=34.15 Aligned_cols=94 Identities=16% Similarity=0.162 Sum_probs=55.0
Q ss_pred EEEEEcCCcchHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhHH
Q 047630 239 IGLDIGGGVATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLH 318 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~ 318 (392)
.||+++-+.|..+..+... ..+.. ++-+.+.......+|. ..... ..+......||+|+....=. .....++
T Consensus 48 ~~l~~n~~~g~~~~~~~~~-~~~~~--~~~~~~~~~~l~~~~~-~~~~~--~~~~~~~~~~d~v~~~~Pk~--k~~~~~~ 119 (381)
T 3dmg_A 48 RALDLNPGVGWGSLPLEGR-MAVER--LETSRAAFRCLTASGL-QARLA--LPWEAAAGAYDLVVLALPAG--RGTAYVQ 119 (381)
T ss_dssp EEEESSCTTSTTTGGGBTT-BEEEE--EECBHHHHHHHHHTTC-CCEEC--CGGGSCTTCEEEEEEECCGG--GCHHHHH
T ss_pred cEEEecCCCCccccccCCC-CceEE--EeCcHHHHHHHHHcCC-Ccccc--CCccCCcCCCCEEEEECCcc--hhHHHHH
Confidence 3499999999877776532 34443 2221233334445554 22111 11222456799988643211 0113467
Q ss_pred HHHHHHHHcccCCcEEEEEeec
Q 047630 319 FLMFDIYRVLRPGGLFWLDHFF 340 (392)
Q Consensus 319 ~~L~el~RvLKPGG~lii~~~~ 340 (392)
..|.++.+.|+|||.+++..-.
T Consensus 120 ~~l~~~~~~l~~g~~i~~~g~~ 141 (381)
T 3dmg_A 120 ASLVAAARALRMGGRLYLAGDK 141 (381)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHhCCCCCEEEEEEcc
Confidence 8899999999999999888533
No 411
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=50.02 E-value=1.8e+02 Score=29.00 Aligned_cols=48 Identities=17% Similarity=0.138 Sum_probs=32.9
Q ss_pred HHHHHHHHHhhCC--CCcccEEEEEcCCcch-HHHH-HHHcCCEEEEEecCC
Q 047630 221 LDFSIDEVLATKK--PGTIRIGLDIGGGVAT-FAVR-MMERNITIVTTSMNL 268 (392)
Q Consensus 221 ~~~lI~~ll~l~~--~~~ir~VLDIGCGtG~-~a~~-La~~g~~vvg~~iD~ 268 (392)
.+.|++.+....+ ...+++|+|.+.|+|. ++.. |.+.|.+++.+..++
T Consensus 177 ~~~Y~~~l~~~~~~~~~~lkivvD~~nG~~~~~~~~ll~~lG~~v~~l~~~p 228 (469)
T 3pdk_A 177 GQKYLQYIKQTVEEDFSGLHIALDCAHGATSSLAPYLFADLEADISTMGTSP 228 (469)
T ss_dssp HHHHHHHHHTTCSSCCTTCEEEEECTTSTTTTHHHHHHHHTTCEEEEESCCC
T ss_pred HHHHHHHHHHhcCcccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCCc
Confidence 5678888876543 2457889999999987 3333 445788887654443
No 412
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=49.22 E-value=18 Score=34.35 Aligned_cols=95 Identities=12% Similarity=0.092 Sum_probs=52.5
Q ss_pred hCCC-CcccEEEEEcC--CcchHHHHHHH-cCCEEEEEecCCCc--hhHHHHHhcCCccEEEecc---CcC-----CC--
Q 047630 231 TKKP-GTIRIGLDIGG--GVATFAVRMME-RNITIVTTSMNLNG--PFNNFIASRGVVPLYISIS---QRL-----PF-- 294 (392)
Q Consensus 231 l~~~-~~ir~VLDIGC--GtG~~a~~La~-~g~~vvg~~iD~~a--~~~~~aa~rg~i~~~~~d~---~~L-----pf-- 294 (392)
+.++ .+| |=+|+ |.|.++..+++ .|..++++.-+.+. ...+.+.+.|.-.++.... .++ ..
T Consensus 164 ~~~g~~~V---lV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~ 240 (364)
T 1gu7_A 164 LTPGKDWF---IQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIK 240 (364)
T ss_dssp CCTTTCEE---EESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHH
T ss_pred cCCCCcEE---EECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhh
Confidence 4444 444 88886 45778888887 68888775533311 0123444556322222111 111 00
Q ss_pred -CCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 295 -FDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 295 -~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
..+.+|+|+-.-.- . .+. +..+.|++||+++...
T Consensus 241 ~~~~g~Dvvid~~G~------~---~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 241 QSGGEAKLALNCVGG------K---SST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHTCCEEEEEESSCH------H---HHH-HHHHTSCTTCEEEECC
T ss_pred ccCCCceEEEECCCc------h---hHH-HHHHHhccCCEEEEec
Confidence 12468998864321 1 123 6779999999997653
No 413
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=49.14 E-value=12 Score=36.81 Aligned_cols=33 Identities=6% Similarity=0.008 Sum_probs=23.8
Q ss_pred EEEEEcCCcchHHHHHH-HcC---CEEEEEecCCCchhH
Q 047630 239 IGLDIGGGVATFAVRMM-ERN---ITIVTTSMNLNGPFN 273 (392)
Q Consensus 239 ~VLDIGCGtG~~a~~La-~~g---~~vvg~~iD~~a~~~ 273 (392)
+++|||++.|.++..++ +.+ ..|++ +++++...
T Consensus 229 ~viDvGAn~G~~s~~~a~~~~~~~~~V~a--fEP~p~~~ 265 (409)
T 2py6_A 229 KMVDCGASIGESLAGLIGVTKGKFERVWM--IEPDRINL 265 (409)
T ss_dssp EEEEETCTTSHHHHHHHHHHTSCCSEEEE--ECCCHHHH
T ss_pred EEEECCCCcCHHHHHHHHHhcCCCCEEEE--EcCCHHHH
Confidence 35999999999999888 432 47888 56644333
No 414
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=48.48 E-value=38 Score=33.34 Aligned_cols=89 Identities=7% Similarity=0.065 Sum_probs=55.2
Q ss_pred EEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCC----CCCcccEEEEcccccccCCc
Q 047630 241 LDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPF----FDNTLDIVHSMHVLSNWIPT 314 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf----~d~sFDlV~s~~~l~~~~~~ 314 (392)
+=+|+|. |. ++..|.+.|..++++|.| ....+.+.+.| +.++.+|..+... .-...|+|++... .
T Consensus 8 iIiG~Gr~G~~va~~L~~~g~~vvvId~d--~~~v~~~~~~g-~~vi~GDat~~~~L~~agi~~A~~viv~~~------~ 78 (413)
T 3l9w_A 8 IIAGFGRFGQITGRLLLSSGVKMVVLDHD--PDHIETLRKFG-MKVFYGDATRMDLLESAGAAKAEVLINAID------D 78 (413)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEEEEECC--HHHHHHHHHTT-CCCEESCTTCHHHHHHTTTTTCSEEEECCS------S
T ss_pred EEECCCHHHHHHHHHHHHCCCCEEEEECC--HHHHHHHHhCC-CeEEEcCCCCHHHHHhcCCCccCEEEECCC------C
Confidence 7777765 33 344455578999995544 45555666666 5788888765421 2346788876432 1
Q ss_pred hhHHHHHHHHHHcccCCcEEEEEe
Q 047630 315 TLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 315 ~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
......+....|.+.|...++...
T Consensus 79 ~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 79 PQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred hHHHHHHHHHHHHhCCCCeEEEEE
Confidence 222346677778888887776553
No 415
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=47.59 E-value=46 Score=31.21 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=35.9
Q ss_pred ccEEEEEcCCc-ch--HHHHHHH-cCCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEEc
Q 047630 237 IRIGLDIGGGV-AT--FAVRMME-RNITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHSM 305 (392)
Q Consensus 237 ir~VLDIGCGt-G~--~a~~La~-~g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s~ 305 (392)
+|. -=||||. |. ++..+.+ .+++++++. |.+....+..+++ + ++-...|.+++ +.+...|+|+..
T Consensus 24 iri-giIG~G~ig~~~~~~~~~~~~~~~lvav~-d~~~~~a~~~a~~~g-~~~~y~d~~el-l~~~~iDaV~I~ 93 (350)
T 4had_A 24 LRF-GIISTAKIGRDNVVPAIQDAENCVVTAIA-SRDLTRAREMADRFS-VPHAFGSYEEM-LASDVIDAVYIP 93 (350)
T ss_dssp EEE-EEESCCHHHHHTHHHHHHHCSSEEEEEEE-CSSHHHHHHHHHHHT-CSEEESSHHHH-HHCSSCSEEEEC
T ss_pred cEE-EEEcChHHHHHHHHHHHHhCCCeEEEEEE-CCCHHHHHHHHHHcC-CCeeeCCHHHH-hcCCCCCEEEEe
Confidence 444 4589986 43 2344544 467777643 5544554444443 5 44444555554 234568998764
No 416
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=46.94 E-value=13 Score=35.26 Aligned_cols=80 Identities=6% Similarity=0.035 Sum_probs=46.3
Q ss_pred cchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC-----C-CCCcccEEEEcccccccCCchhHHH
Q 047630 247 VATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP-----F-FDNTLDIVHSMHVLSNWIPTTLLHF 319 (392)
Q Consensus 247 tG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp-----f-~d~sFDlV~s~~~l~~~~~~~~l~~ 319 (392)
.|..+..+++ .|.+|++++. +....+.+.+.|.-..+.....++. . ....+|+|+-.-.- .
T Consensus 177 vG~~a~qla~~~Ga~Vi~~~~--~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~----------~ 244 (349)
T 3pi7_A 177 LCKLIIGLAKEEGFRPIVTVR--RDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG----------P 244 (349)
T ss_dssp HHHHHHHHHHHHTCEEEEEES--CGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH----------H
T ss_pred HHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC----------h
Confidence 3556666665 6889988553 3455556666663222222111110 0 01358998865432 1
Q ss_pred HHHHHHHcccCCcEEEEEe
Q 047630 320 LMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 320 ~L~el~RvLKPGG~lii~~ 338 (392)
.+.++.+.|++||.+++..
T Consensus 245 ~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 245 LASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp HHHHHHHHSCTTCEEEECC
T ss_pred hHHHHHhhhcCCCEEEEEe
Confidence 3477889999999998764
No 417
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=46.38 E-value=74 Score=27.54 Aligned_cols=87 Identities=13% Similarity=0.027 Sum_probs=48.7
Q ss_pred EEEcCCcchHHH----HHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCC----CCCcccEEEEcccccccC
Q 047630 241 LDIGGGVATFAV----RMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPF----FDNTLDIVHSMHVLSNWI 312 (392)
Q Consensus 241 LDIGCGtG~~a~----~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf----~d~sFDlV~s~~~l~~~~ 312 (392)
+=+|+ |.++. .|.+.|..++.+|.| ....+..++...+.++.+|..+... .-...|+|++...
T Consensus 4 iIiG~--G~~G~~la~~L~~~g~~v~vid~~--~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~----- 74 (218)
T 3l4b_C 4 IIIGG--ETTAYYLARSMLSRKYGVVIINKD--RELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP----- 74 (218)
T ss_dssp EEECC--HHHHHHHHHHHHHTTCCEEEEESC--HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS-----
T ss_pred EEECC--CHHHHHHHHHHHhCCCeEEEEECC--HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC-----
Confidence 55665 55444 444578899885533 3444444433225778887654211 1245788886532
Q ss_pred CchhHHHHHHHHHHcccCCcEEEEE
Q 047630 313 PTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 313 ~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
......++..+.+.+.+...++..
T Consensus 75 -~d~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 75 -RDEVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp -CHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred -CcHHHHHHHHHHHHHcCCCeEEEE
Confidence 122234666667766676666543
No 418
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=45.03 E-value=20 Score=34.00 Aligned_cols=90 Identities=18% Similarity=0.143 Sum_probs=48.8
Q ss_pred hCCCCcccEEEEEcC--CcchHHHHHHH-c-CCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC-----CCCCCcccE
Q 047630 231 TKKPGTIRIGLDIGG--GVATFAVRMME-R-NITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-----PFFDNTLDI 301 (392)
Q Consensus 231 l~~~~~ir~VLDIGC--GtG~~a~~La~-~-g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-----pf~d~sFDl 301 (392)
+.++.++ |=.|+ |.|..+..+++ . +..|++++ +....+.+. .|...++. ...++ ....+.+|+
T Consensus 140 ~~~g~~V---lV~Ga~G~vG~~a~qla~~~g~~~V~~~~---~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~~g~Dv 211 (349)
T 4a27_A 140 LREGMSV---LVHSAGGGVGQAVAQLCSTVPNVTVFGTA---STFKHEAIK-DSVTHLFD-RNADYVQEVKRISAEGVDI 211 (349)
T ss_dssp CCTTCEE---EESSTTSHHHHHHHHHHTTSTTCEEEEEE---CGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCTTCEEE
T ss_pred CCCCCEE---EEEcCCcHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcCCCceE
Confidence 4455555 88887 35778888887 3 46777754 233334333 55322222 21111 012357999
Q ss_pred EEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 302 VHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 302 V~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
|+-.-.- . .+.+..+.|++||++++..
T Consensus 212 v~d~~g~------~----~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 212 VLDCLCG------D----NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEECC-----------------CTTEEEEEEEEEEC
T ss_pred EEECCCc------h----hHHHHHHHhhcCCEEEEEC
Confidence 9864321 1 2367789999999997654
No 419
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=44.21 E-value=11 Score=36.53 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHcccCCcEEEEEeecccccch
Q 047630 315 TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQL 346 (392)
Q Consensus 315 ~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l 346 (392)
+.++.+|..+.++|+|||++++..|..-++.+
T Consensus 251 ~~L~~~L~~a~~~L~~gGRl~VISFHSLEDRi 282 (347)
T 3tka_A 251 EEIEQALKSSLNVLAPGGRLSIISFHSLEDRI 282 (347)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEESSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecCchhHHH
Confidence 56788999999999999999999987766655
No 420
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=43.65 E-value=1e+02 Score=27.99 Aligned_cols=82 Identities=15% Similarity=0.255 Sum_probs=48.4
Q ss_pred EEEEcC-Cc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchh
Q 047630 240 GLDIGG-GV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTL 316 (392)
Q Consensus 240 VLDIGC-Gt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~ 316 (392)
|.=||+ |. | .++..|++.|.+|++ .|.+....+.+.+.| +.. .+... .-...|+|+..-. +..
T Consensus 14 I~iIG~tG~mG~~la~~l~~~g~~V~~--~~r~~~~~~~~~~~g-~~~--~~~~~---~~~~aDvVi~av~------~~~ 79 (286)
T 3c24_A 14 VAILGAGGKMGARITRKIHDSAHHLAA--IEIAPEGRDRLQGMG-IPL--TDGDG---WIDEADVVVLALP------DNI 79 (286)
T ss_dssp EEEETTTSHHHHHHHHHHHHSSSEEEE--ECCSHHHHHHHHHTT-CCC--CCSSG---GGGTCSEEEECSC------HHH
T ss_pred EEEECCCCHHHHHHHHHHHhCCCEEEE--EECCHHHHHHHHhcC-CCc--CCHHH---HhcCCCEEEEcCC------chH
Confidence 377898 75 3 366777778888887 445344444444445 222 12111 1134788886432 234
Q ss_pred HHHHHHHHHHcccCCcEEE
Q 047630 317 LHFLMFDIYRVLRPGGLFW 335 (392)
Q Consensus 317 l~~~L~el~RvLKPGG~li 335 (392)
.+.++.++...+++|..++
T Consensus 80 ~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 80 IEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp HHHHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHHHHhCCCCCEEE
Confidence 5678888888888876543
No 421
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=42.34 E-value=1.7e+02 Score=26.36 Aligned_cols=88 Identities=8% Similarity=0.085 Sum_probs=50.1
Q ss_pred EEEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEE-----------eccCcCCCCCCcccEEEEcc
Q 047630 240 GLDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYI-----------SISQRLPFFDNTLDIVHSMH 306 (392)
Q Consensus 240 VLDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~-----------~d~~~Lpf~d~sFDlV~s~~ 306 (392)
|.=||+|. | .++..|++.|.+|+.+ |.+....+.+.+.+. .... .+..++.-.-...|+|+..-
T Consensus 6 i~iiG~G~~G~~~a~~l~~~g~~V~~~--~r~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v 82 (316)
T 2ew2_A 6 IAIAGAGAMGSRLGIMLHQGGNDVTLI--DQWPAHIEAIRKNGL-IADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALT 82 (316)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHHHCE-EEEETTEEEEECCCEECGGGCCTTSCCCSEEEECS
T ss_pred EEEECcCHHHHHHHHHHHhCCCcEEEE--ECCHHHHHHHHhCCE-EEEeCCCeeEecceeecchhhcccCCCCCEEEEEe
Confidence 37789885 3 3667777789998884 443444455555552 2211 01111100002578888653
Q ss_pred cccccCCchhHHHHHHHHHHcccCCcEEEE
Q 047630 307 VLSNWIPTTLLHFLMFDIYRVLRPGGLFWL 336 (392)
Q Consensus 307 ~l~~~~~~~~l~~~L~el~RvLKPGG~lii 336 (392)
. ....+.++.++...++++..++.
T Consensus 83 ~------~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 83 K------AQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp C------HHHHHHHHHHHGGGCCTTCEEEE
T ss_pred c------cccHHHHHHHHHHhcCCCCEEEE
Confidence 2 23456788888888888776543
No 422
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=41.91 E-value=29 Score=37.28 Aligned_cols=88 Identities=18% Similarity=0.111 Sum_probs=51.1
Q ss_pred CCCCcccEEEEEc--CCcchHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCC--------CCCccc
Q 047630 232 KKPGTIRIGLDIG--GGVATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPF--------FDNTLD 300 (392)
Q Consensus 232 ~~~~~ir~VLDIG--CGtG~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf--------~d~sFD 300 (392)
.++.+| |=.| .|.|..+..+++ .|.+|++++ . .+..+ ..+.+.-.++ +.....+ ....+|
T Consensus 344 ~~G~~V---LI~gaaGgvG~~aiqlAk~~Ga~V~~t~--~-~~k~~-~l~lga~~v~--~~~~~~~~~~i~~~t~g~GvD 414 (795)
T 3slk_A 344 RPGESL---LVHSAAGGVGMAAIQLARHLGAEVYATA--S-EDKWQ-AVELSREHLA--SSRTCDFEQQFLGATGGRGVD 414 (795)
T ss_dssp CTTCCE---EEESTTBHHHHHHHHHHHHTTCCEEEEC--C-GGGGG-GSCSCGGGEE--CSSSSTHHHHHHHHSCSSCCS
T ss_pred CCCCEE---EEecCCCHHHHHHHHHHHHcCCEEEEEe--C-hHHhh-hhhcChhhee--ecCChhHHHHHHHHcCCCCeE
Confidence 345555 8888 467888988888 688888854 2 22211 1112211121 1111111 234699
Q ss_pred EEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEe
Q 047630 301 IVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 301 lV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
+|+-.-.- ..+.+..+.|+|||+++...
T Consensus 415 vVld~~gg----------~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 415 VVLNSLAG----------EFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp EEEECCCT----------TTTHHHHTSCTTCEEEEECC
T ss_pred EEEECCCc----------HHHHHHHHHhcCCCEEEEec
Confidence 99974321 13577889999999997653
No 423
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=41.87 E-value=1.1e+02 Score=28.04 Aligned_cols=107 Identities=13% Similarity=0.119 Sum_probs=61.7
Q ss_pred EEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhHH
Q 047630 241 LDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLH 318 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~ 318 (392)
-=||+|. |. ++..|++.|.+|++.|.+ ....+.+.+.|. .+ ..+..++ -. .|+|+..-. ++..++
T Consensus 19 ~vIG~G~mG~~~A~~l~~~G~~V~~~dr~--~~~~~~~~~~g~-~~-~~~~~~~---~~-aDvvi~~vp-----~~~~~~ 85 (296)
T 3qha_A 19 GYIGLGNMGAPMATRMTEWPGGVTVYDIR--IEAMTPLAEAGA-TL-ADSVADV---AA-ADLIHITVL-----DDAQVR 85 (296)
T ss_dssp EEECCSTTHHHHHHHHTTSTTCEEEECSS--TTTSHHHHHTTC-EE-CSSHHHH---TT-SSEEEECCS-----SHHHHH
T ss_pred EEECcCHHHHHHHHHHHHCCCeEEEEeCC--HHHHHHHHHCCC-EE-cCCHHHH---Hh-CCEEEEECC-----ChHHHH
Confidence 6788885 43 677777789999885544 455555555553 21 1222222 12 688876432 234556
Q ss_pred HHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEE
Q 047630 319 FLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 319 ~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i 362 (392)
.++.++...+++|..++-..- ......+.+.+.+.+.|...+
T Consensus 86 ~v~~~l~~~l~~g~ivv~~st--~~~~~~~~~~~~~~~~g~~~~ 127 (296)
T 3qha_A 86 EVVGELAGHAKPGTVIAIHST--ISDTTAVELARDLKARDIHIV 127 (296)
T ss_dssp HHHHHHHTTCCTTCEEEECSC--CCHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHHHHHhcCCCCEEEEeCC--CCHHHHHHHHHHHHHcCCEEE
Confidence 788899999998876643321 122223345556666675544
No 424
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=40.99 E-value=85 Score=29.78 Aligned_cols=62 Identities=6% Similarity=0.071 Sum_probs=34.1
Q ss_pred EEEcCCcch---HHHHHHHcCCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEEc
Q 047630 241 LDIGGGVAT---FAVRMMERNITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHSM 305 (392)
Q Consensus 241 LDIGCGtG~---~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s~ 305 (392)
-=||||... ++..+...+++++++. |.+....+..+++ +... ...+.+++- .+...|+|+..
T Consensus 30 giiG~G~~~~~~~~~~~~~~~~~lvav~-d~~~~~a~~~a~~~~~~~-~~~~~~~ll-~~~~vD~V~I~ 95 (361)
T 3u3x_A 30 AAVGLNHNHIYGQVNCLLRAGARLAGFH-EKDDALAAEFSAVYADAR-RIATAEEIL-EDENIGLIVSA 95 (361)
T ss_dssp EEECCCSTTHHHHHHHHHHTTCEEEEEE-CSCHHHHHHHHHHSSSCC-EESCHHHHH-TCTTCCEEEEC
T ss_pred EEECcCHHHHHHHHHHhhcCCcEEEEEE-cCCHHHHHHHHHHcCCCc-ccCCHHHHh-cCCCCCEEEEe
Confidence 679999754 2344445788877643 5544444444433 4323 234444432 34568998853
No 425
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=40.70 E-value=1.2e+02 Score=27.67 Aligned_cols=70 Identities=17% Similarity=0.156 Sum_probs=43.9
Q ss_pred EEEEcCCcch---HHHHHHHcCCEEEEEecCCCchhHHHHHhcC-CccEEEeccCcC-----CCCCCcccEEEEccccc
Q 047630 240 GLDIGGGVAT---FAVRMMERNITIVTTSMNLNGPFNNFIASRG-VVPLYISISQRL-----PFFDNTLDIVHSMHVLS 309 (392)
Q Consensus 240 VLDIGCGtG~---~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg-~i~~~~~d~~~L-----pf~d~sFDlV~s~~~l~ 309 (392)
+|=-|.+.|. .+..|++.|.+|+.++.+......+.+.+.+ .+..+..|..+- -+..+..|+++.+-...
T Consensus 12 alVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAGi~ 90 (247)
T 4hp8_A 12 ALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAGII 90 (247)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECCCCC
T ss_pred EEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECCCCC
Confidence 4777877775 7788888999999977665222223444444 345556654332 13456799999875543
No 426
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=40.59 E-value=2.6e+02 Score=27.56 Aligned_cols=133 Identities=18% Similarity=0.224 Sum_probs=69.2
Q ss_pred cHHHHHHHHHhhCCC-CcccEEEEEcCCcch-HHHHH-HHcCCEEEEEecCCCch-----------h-HH----HHHhcC
Q 047630 220 GLDFSIDEVLATKKP-GTIRIGLDIGGGVAT-FAVRM-MERNITIVTTSMNLNGP-----------F-NN----FIASRG 280 (392)
Q Consensus 220 ~~~~lI~~ll~l~~~-~~ir~VLDIGCGtG~-~a~~L-a~~g~~vvg~~iD~~a~-----------~-~~----~aa~rg 280 (392)
..+.|++.+...... ..+++|+|.+.|+|. ++..+ .+.|.+++.+..+++.. . .. .+.+.+
T Consensus 155 ~~~~Y~~~l~~~~~~~~~lkivvD~~nG~~~~~~~~ll~~lG~~v~~~~~~pDg~f~~~~p~p~~~~~l~~l~~~v~~~~ 234 (463)
T 1p5d_X 155 ILPRYFKQIRDDIAMAKPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAEN 234 (463)
T ss_dssp CHHHHHHHHHTTCCCSSCEEEEEECTTSGGGGTHHHHHHHHHEEEEEESCSCCTTCCSSCSCTTSGGGGHHHHHHHHHTT
T ss_pred hHHHHHHHHHhhhcccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCccCCCCCCCCcCCCCHHHHHHHHHHHHHhC
Confidence 377889988875432 567889999999987 33334 34577776643332211 0 11 122222
Q ss_pred CccEEE---eccCcCCCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHc
Q 047630 281 VVPLYI---SISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESV 357 (392)
Q Consensus 281 ~i~~~~---~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~a 357 (392)
..+.. +|..++-+.++. . .+.+.+.+..++....-.-.|++.++.... +. ..+.+++++.
T Consensus 235 -adlgia~DgDaDR~~~vd~~-------G---~~l~gd~i~~L~a~~l~~~~~~~~vv~~v~-ss-----~~l~~~~~~~ 297 (463)
T 1p5d_X 235 -ADLGLAFDGDGDRVGVVTNT-------G---TIIYPDRLLMLFAKDVVSRNPGADIIFDVK-CT-----RRLIALISGY 297 (463)
T ss_dssp -CSEEEEECTTSSBEEEEETT-------C---CEECHHHHHHHHHHHHHHHSTTCEEEEETT-SC-----THHHHHHHHT
T ss_pred -CCEEEEECCCCCeEEEEeCC-------C---cEeCHHHHHHHHHHHHHHhCCCCeEEEEec-Cc-----HHHHHHHHHc
Confidence 23322 234443322221 1 223444433344332222246776654432 21 2255677889
Q ss_pred CCeEEEEEEeec
Q 047630 358 GFNKLKWVVGRK 369 (392)
Q Consensus 358 Gf~~i~w~~~~k 369 (392)
|.+.+++.++.+
T Consensus 298 g~~~~~t~tG~k 309 (463)
T 1p5d_X 298 GGRPVMWKTGHS 309 (463)
T ss_dssp TCEEEEECSSHH
T ss_pred CCEEEEeCCcHH
Confidence 999998886654
No 427
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=40.51 E-value=1.3e+02 Score=23.33 Aligned_cols=104 Identities=10% Similarity=0.027 Sum_probs=54.0
Q ss_pred EEEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCC----CCCCcccEEEEcccccccC
Q 047630 240 GLDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLP----FFDNTLDIVHSMHVLSNWI 312 (392)
Q Consensus 240 VLDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lp----f~d~sFDlV~s~~~l~~~~ 312 (392)
|+=+|+|. |. ++..|.+.|..++.++ .+....+...+. + +.++.++..... ..-..+|+|+..-.-
T Consensus 7 i~IiG~G~iG~~~a~~L~~~g~~v~~~d--~~~~~~~~~~~~~~-~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~---- 79 (140)
T 1lss_A 7 IIIAGIGRVGYTLAKSLSEKGHDIVLID--IDKDICKKASAEID-ALVINGDCTKIKTLEDAGIEDADMYIAVTGK---- 79 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHCS-SEEEESCTTSHHHHHHTTTTTCSEEEECCSC----
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEE--CCHHHHHHHHHhcC-cEEEEcCCCCHHHHHHcCcccCCEEEEeeCC----
Confidence 37778754 22 4455566788888855 333333334433 4 455666543211 112458988876321
Q ss_pred CchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCe
Q 047630 313 PTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFN 360 (392)
Q Consensus 313 ~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~ 360 (392)
......+.++.+.+.++ .+++... ... ..+.++++|..
T Consensus 80 --~~~~~~~~~~~~~~~~~-~ii~~~~---~~~----~~~~l~~~g~~ 117 (140)
T 1lss_A 80 --EEVNLMSSLLAKSYGIN-KTIARIS---EIE----YKDVFERLGVD 117 (140)
T ss_dssp --HHHHHHHHHHHHHTTCC-CEEEECS---STT----HHHHHHHTTCS
T ss_pred --chHHHHHHHHHHHcCCC-EEEEEec---CHh----HHHHHHHcCCC
Confidence 22223556667778775 4443221 111 23466778864
No 428
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=40.44 E-value=70 Score=32.40 Aligned_cols=83 Identities=11% Similarity=0.124 Sum_probs=47.4
Q ss_pred EEEEcCCcch---HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchh
Q 047630 240 GLDIGGGVAT---FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTL 316 (392)
Q Consensus 240 VLDIGCGtG~---~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~ 316 (392)
|+=+|+| |. .+..++..|..|+.++ .+......++..+. .+.+.... ...+|+|+....-.+.
T Consensus 268 VvVtGaG-gIG~aiA~~Laa~GA~Viv~D--~~~~~a~~Aa~~g~---dv~~lee~---~~~aDvVi~atG~~~v----- 333 (488)
T 3ond_A 268 AVVAGYG-DVGKGCAAALKQAGARVIVTE--IDPICALQATMEGL---QVLTLEDV---VSEADIFVTTTGNKDI----- 333 (488)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCEEEEEC--SCHHHHHHHHHTTC---EECCGGGT---TTTCSEEEECSSCSCS-----
T ss_pred EEEECCC-HHHHHHHHHHHHCCCEEEEEc--CCHHHHHHHHHhCC---ccCCHHHH---HHhcCEEEeCCCChhh-----
Confidence 4788887 42 5566666899998854 43344444555542 22222222 2358988865433232
Q ss_pred HHHHHHHHHHcccCCcEEEEEee
Q 047630 317 LHFLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 317 l~~~L~el~RvLKPGG~lii~~~ 339 (392)
+-.+..+.+|+|++++-...
T Consensus 334 ---l~~e~l~~mk~gaiVvNaG~ 353 (488)
T 3ond_A 334 ---IMLDHMKKMKNNAIVCNIGH 353 (488)
T ss_dssp ---BCHHHHTTSCTTEEEEESSS
T ss_pred ---hhHHHHHhcCCCeEEEEcCC
Confidence 11345678899998765543
No 429
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=39.84 E-value=2.1e+02 Score=28.54 Aligned_cols=91 Identities=15% Similarity=0.046 Sum_probs=54.9
Q ss_pred CcccEEEEEcCCc--chHHHHHHHcCCEEEEEecCCCchhH--------HHHHhcCCcc----------EE-EeccCcCC
Q 047630 235 GTIRIGLDIGGGV--ATFAVRMMERNITIVTTSMNLNGPFN--------NFIASRGVVP----------LY-ISISQRLP 293 (392)
Q Consensus 235 ~~ir~VLDIGCGt--G~~a~~La~~g~~vvg~~iD~~a~~~--------~~aa~rg~i~----------~~-~~d~~~Lp 293 (392)
..++.|-=||+|+ +.++..+++.|..|+..|.+. ... +...++|.+. +. ..+.+.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~--e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~a-- 127 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE--QRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHK-- 127 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH--HHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGG--
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH--HHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHH--
Confidence 3455667899987 457888888999999965543 311 1233444321 11 222222
Q ss_pred CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEE
Q 047630 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFW 335 (392)
Q Consensus 294 f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~li 335 (392)
-...|+|+-.-. .+.+....++.++...++|+.+|.
T Consensus 128 --l~~aDlVIeAVp----e~~~vk~~v~~~l~~~~~~~aIla 163 (460)
T 3k6j_A 128 --LSNCDLIVESVI----EDMKLKKELFANLENICKSTCIFG 163 (460)
T ss_dssp --CTTCSEEEECCC----SCHHHHHHHHHHHHTTSCTTCEEE
T ss_pred --HccCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCCEEE
Confidence 234688886532 122344568899999999988874
No 430
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=39.80 E-value=1.4e+02 Score=27.07 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=60.8
Q ss_pred EEEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhH
Q 047630 240 GLDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLL 317 (392)
Q Consensus 240 VLDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l 317 (392)
|.=||+|. | .++..|++.|.+|+++ |.+....+.+.+.|. .. ..+..+. -...|+|+..-. ++..+
T Consensus 6 I~iiG~G~mG~~~a~~l~~~G~~V~~~--d~~~~~~~~~~~~g~-~~-~~~~~~~---~~~aDvvi~~vp-----~~~~~ 73 (302)
T 2h78_A 6 IAFIGLGHMGAPMATNLLKAGYLLNVF--DLVQSAVDGLVAAGA-SA-ARSARDA---VQGADVVISMLP-----ASQHV 73 (302)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEE--CSSHHHHHHHHHTTC-EE-CSSHHHH---HTTCSEEEECCS-----CHHHH
T ss_pred EEEEeecHHHHHHHHHHHhCCCeEEEE--cCCHHHHHHHHHCCC-eE-cCCHHHH---HhCCCeEEEECC-----CHHHH
Confidence 36788886 3 3677788889999884 554455555556553 21 1121111 123688876431 23445
Q ss_pred HHHHH---HHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEE
Q 047630 318 HFLMF---DIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 318 ~~~L~---el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i 362 (392)
+.++. ++...+++|..++-.... .....+.+.+.+.+.|...+
T Consensus 74 ~~v~~~~~~~~~~l~~~~~vi~~st~--~~~~~~~l~~~~~~~g~~~~ 119 (302)
T 2h78_A 74 EGLYLDDDGLLAHIAPGTLVLECSTI--APTSARKIHAAARERGLAML 119 (302)
T ss_dssp HHHHHSSSCGGGSSCSSCEEEECSCC--CHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHcCchhHHhcCCCCcEEEECCCC--CHHHHHHHHHHHHHcCCEEE
Confidence 56776 777788887765433211 11222345666666675544
No 431
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=39.00 E-value=1.3e+02 Score=28.90 Aligned_cols=112 Identities=13% Similarity=0.019 Sum_probs=61.9
Q ss_pred EEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhHH
Q 047630 241 LDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLH 318 (392)
Q Consensus 241 LDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~ 318 (392)
.=||+|. | .++..|++.|..|++ .|.+....+.+.+.+. .. ..+..++--.....|+|+..-.- ...+
T Consensus 26 giIGlG~mG~~~A~~L~~~G~~V~v--~dr~~~~~~~l~~~g~-~~-~~s~~e~~~~a~~~DvVi~~vp~------~~v~ 95 (358)
T 4e21_A 26 GMIGLGRMGADMVRRLRKGGHECVV--YDLNVNAVQALEREGI-AG-ARSIEEFCAKLVKPRVVWLMVPA------AVVD 95 (358)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEE--ECSCHHHHHHHHTTTC-BC-CSSHHHHHHHSCSSCEEEECSCG------GGHH
T ss_pred EEECchHHHHHHHHHHHhCCCEEEE--EeCCHHHHHHHHHCCC-EE-eCCHHHHHhcCCCCCEEEEeCCH------HHHH
Confidence 6788875 3 366777778999988 4554455555555553 11 11111110011234888764322 2456
Q ss_pred HHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEE
Q 047630 319 FLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 319 ~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
.++.++...|++|.+++ +.-.. .......+.+.+.+.|...+.-
T Consensus 96 ~vl~~l~~~l~~g~iiI-d~st~-~~~~~~~~~~~l~~~g~~~vda 139 (358)
T 4e21_A 96 SMLQRMTPLLAANDIVI-DGGNS-HYQDDIRRADQMRAQGITYVDV 139 (358)
T ss_dssp HHHHHHGGGCCTTCEEE-ECSSC-CHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHhhCCCCCEEE-eCCCC-ChHHHHHHHHHHHHCCCEEEeC
Confidence 78899999998876554 32211 1122233555667777765543
No 432
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=38.06 E-value=2.3e+02 Score=27.77 Aligned_cols=132 Identities=13% Similarity=0.023 Sum_probs=67.1
Q ss_pred HHHHHHHHHhhCC-----CCcccEEEEEcCCcch-HHH-HHHHcCCEEEEEecCCCchhH---------------HHHHh
Q 047630 221 LDFSIDEVLATKK-----PGTIRIGLDIGGGVAT-FAV-RMMERNITIVTTSMNLNGPFN---------------NFIAS 278 (392)
Q Consensus 221 ~~~lI~~ll~l~~-----~~~ir~VLDIGCGtG~-~a~-~La~~g~~vvg~~iD~~a~~~---------------~~aa~ 278 (392)
.+.|++.+..... ...+++|+|.+.|+|. ++. .|.+.|.+++.+..+++..+. +.+.+
T Consensus 152 ~~~Y~~~l~~~~~~~~i~~~~lkivvd~~~G~~~~~~~~~l~~lG~~v~~~~~~pDg~F~~~~p~p~~~~l~~l~~~v~~ 231 (455)
T 2f7l_A 152 ISTYVNGILSHVDIEKIKKKNYKVLIDPANSVGALSTPLVARALGCKIYTINGNLDPLFSARQPEPTFDSLKETAEVVKT 231 (455)
T ss_dssp HHHHHHHHHTTSCHHHHHHHCCEEEEECTTTGGGGTHHHHHHHTTCEEEEBSCSCCTTCTTSCSSCCTTTSHHHHHHHHH
T ss_pred HHHHHHHHHhhcChhhcccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcCCCCCCCCCcCcchHHHHHHHHHHHH
Confidence 5677777765432 1357889999999997 333 344578888764333321111 12222
Q ss_pred cCCccEEEe---ccCcCCCCCCcccEEEEcccccccCCchhHHHHHHHHHHccc--CCcEEEEEeecccccchHHHHHHH
Q 047630 279 RGVVPLYIS---ISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLR--PGGLFWLDHFFCVGAQLEDVYVPL 353 (392)
Q Consensus 279 rg~i~~~~~---d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLK--PGG~lii~~~~~~~~~l~~~l~~l 353 (392)
.+ ..+..+ |..++-+.++. ..+.+.+.+-.++....-.-+ ++|.++.+. .+. ..+.++
T Consensus 232 ~~-adlgia~DgDaDR~~~vd~~----------g~~l~gd~i~~lla~~l~~~~~~~~~~vv~tv-~ss-----~~l~~~ 294 (455)
T 2f7l_A 232 LK-VDLGVAHDGDADRAIFIDSE----------GRVQWGDRSGTLLSYWASVKNPKAIKKIVTAV-SSS-----SLVEEY 294 (455)
T ss_dssp TT-CSEEEECCTTSCCCEEEETT----------SCBCCHHHHHHHHHHHHHHTCTTSCSEEEEET-TSC-----THHHHH
T ss_pred cC-CCEEEEECCCCCeEEEEcCC----------CeEEChHHHHHHHHHHHHHhCccCCCeEEEEe-ccc-----HHHHHH
Confidence 22 233322 33333221111 123344444344433221112 456555442 221 236678
Q ss_pred HHHcCCeEEEEEEeec
Q 047630 354 IESVGFNKLKWVVGRK 369 (392)
Q Consensus 354 l~~aGf~~i~w~~~~k 369 (392)
+++.|.+.+++.++.+
T Consensus 295 a~~~g~~~~~t~~G~k 310 (455)
T 2f7l_A 295 LSKYNIQVDWTKVGSV 310 (455)
T ss_dssp HHTTTCEEEEECSCHH
T ss_pred HHHcCCEEEEEcCcHH
Confidence 8889999998886654
No 433
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=35.97 E-value=16 Score=34.55 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHcccCCcEEEEEeecccccch
Q 047630 315 TLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQL 346 (392)
Q Consensus 315 ~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l 346 (392)
+.++.+|..+.++|+|||++.+..|..-++.+
T Consensus 222 ~~l~~~l~~~~~~l~~ggr~~visfhsledr~ 253 (301)
T 1m6y_A 222 ENLKEFLKKAEDLLNPGGRIVVISFHSLEDRI 253 (301)
T ss_dssp HHHHHHHHHGGGGEEEEEEEEEEESSHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEecCcHHHHH
Confidence 56788999999999999999999888766555
No 434
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=35.88 E-value=1.7e+02 Score=27.02 Aligned_cols=85 Identities=13% Similarity=0.070 Sum_probs=50.4
Q ss_pred EEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEec---------cCcCCCCCCcccEEEEccccc
Q 047630 241 LDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISI---------SQRLPFFDNTLDIVHSMHVLS 309 (392)
Q Consensus 241 LDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d---------~~~Lpf~d~sFDlV~s~~~l~ 309 (392)
.=||+|. | .++..|++.|.+|+.+ .+....+.+.+.|. .....+ ..+.. .-..+|+|+..-
T Consensus 23 ~IiGaGa~G~~~a~~L~~~G~~V~l~---~~~~~~~~i~~~g~-~~~~~~~~~~~~~~~~~~~~-~~~~~D~vilav--- 94 (318)
T 3hwr_A 23 AIMGAGAVGCYYGGMLARAGHEVILI---ARPQHVQAIEATGL-RLETQSFDEQVKVSASSDPS-AVQGADLVLFCV--- 94 (318)
T ss_dssp EEESCSHHHHHHHHHHHHTTCEEEEE---CCHHHHHHHHHHCE-EEECSSCEEEECCEEESCGG-GGTTCSEEEECC---
T ss_pred EEECcCHHHHHHHHHHHHCCCeEEEE---EcHhHHHHHHhCCe-EEEcCCCcEEEeeeeeCCHH-HcCCCCEEEEEc---
Confidence 7889986 3 4777888889888874 33444455555552 111000 01111 114589887643
Q ss_pred ccCCchhHHHHHHHHHHcccCCcEEEE
Q 047630 310 NWIPTTLLHFLMFDIYRVLRPGGLFWL 336 (392)
Q Consensus 310 ~~~~~~~l~~~L~el~RvLKPGG~lii 336 (392)
+...++.+++++...++++..++.
T Consensus 95 ---k~~~~~~~l~~l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 95 ---KSTDTQSAALAMKPALAKSALVLS 118 (318)
T ss_dssp ---CGGGHHHHHHHHTTTSCTTCEEEE
T ss_pred ---ccccHHHHHHHHHHhcCCCCEEEE
Confidence 223456789999999998876543
No 435
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=35.50 E-value=1.9e+02 Score=25.90 Aligned_cols=85 Identities=13% Similarity=0.065 Sum_probs=48.5
Q ss_pred EEEEcCCc-c-hHHHHHHHc--CCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCch
Q 047630 240 GLDIGGGV-A-TFAVRMMER--NITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTT 315 (392)
Q Consensus 240 VLDIGCGt-G-~~a~~La~~--g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~ 315 (392)
|.=||+|. | .++..|++. +.+|++ .|.+....+.+.+.|.......+.... -...|+|+..-. ..
T Consensus 9 I~iIG~G~mG~~~a~~l~~~g~~~~V~~--~d~~~~~~~~~~~~g~~~~~~~~~~~~---~~~aDvVilavp------~~ 77 (290)
T 3b1f_A 9 IYIAGLGLIGASLALGIKRDHPHYKIVG--YNRSDRSRDIALERGIVDEATADFKVF---AALADVIILAVP------IK 77 (290)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTSEEEE--ECSSHHHHHHHHHTTSCSEEESCTTTT---GGGCSEEEECSC------HH
T ss_pred EEEEeeCHHHHHHHHHHHhCCCCcEEEE--EcCCHHHHHHHHHcCCcccccCCHHHh---hcCCCEEEEcCC------HH
Confidence 36788876 3 356666666 578877 445344444555555432222232221 134688886432 23
Q ss_pred hHHHHHHHHHHc-ccCCcEEE
Q 047630 316 LLHFLMFDIYRV-LRPGGLFW 335 (392)
Q Consensus 316 ~l~~~L~el~Rv-LKPGG~li 335 (392)
..+.++.++... +++|.+++
T Consensus 78 ~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 78 KTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp HHHHHHHHHHTSCCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCCEEE
Confidence 345688888888 88876554
No 436
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=35.11 E-value=76 Score=28.27 Aligned_cols=97 Identities=19% Similarity=0.156 Sum_probs=53.8
Q ss_pred EEEEcCCcch---HHHHHHHcCCEEEEEecCCCchhHHHHHhc--CCccEEEeccCcCCC----------CCCcccEEEE
Q 047630 240 GLDIGGGVAT---FAVRMMERNITIVTTSMNLNGPFNNFIASR--GVVPLYISISQRLPF----------FDNTLDIVHS 304 (392)
Q Consensus 240 VLDIGCGtG~---~a~~La~~g~~vvg~~iD~~a~~~~~aa~r--g~i~~~~~d~~~Lpf----------~d~sFDlV~s 304 (392)
+|=.|++.|. ++..|++.|.+|+.++-+ ....+...+. ..+.++..|..+..- .-+..|+++.
T Consensus 11 ~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 88 (255)
T 4eso_A 11 AIVIGGTHGMGLATVRRLVEGGAEVLLTGRN--ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHI 88 (255)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEE
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4888877664 667777899999886543 3333322221 234566666544311 1136898887
Q ss_pred cccccccC-----CchhHH-----------HHHHHHHHcccCCcEEEEEe
Q 047630 305 MHVLSNWI-----PTTLLH-----------FLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 305 ~~~l~~~~-----~~~~l~-----------~~L~el~RvLKPGG~lii~~ 338 (392)
+-...... +.++++ .+.+.+...++.+|.++...
T Consensus 89 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 89 NAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 65443211 222222 23455566777788876654
No 437
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=34.47 E-value=2e+02 Score=25.59 Aligned_cols=105 Identities=10% Similarity=-0.043 Sum_probs=57.1
Q ss_pred EEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhHH
Q 047630 241 LDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLH 318 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~ 318 (392)
.=||+|. |. ++..|++ |.+|+.+ |.+....+.+.+.|. .... .... -...|+|+..-. .+...+
T Consensus 5 ~iiG~G~~G~~~a~~l~~-g~~V~~~--~~~~~~~~~~~~~g~-~~~~--~~~~---~~~~D~vi~~v~-----~~~~~~ 70 (289)
T 2cvz_A 5 AFIGLGAMGYPMAGHLAR-RFPTLVW--NRTFEKALRHQEEFG-SEAV--PLER---VAEARVIFTCLP-----TTREVY 70 (289)
T ss_dssp EEECCSTTHHHHHHHHHT-TSCEEEE--CSSTHHHHHHHHHHC-CEEC--CGGG---GGGCSEEEECCS-----SHHHHH
T ss_pred EEEcccHHHHHHHHHHhC-CCeEEEE--eCCHHHHHHHHHCCC-cccC--HHHH---HhCCCEEEEeCC-----ChHHHH
Confidence 6678886 44 6677777 9888874 443444444444453 2211 1111 125798886432 122345
Q ss_pred HHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeE
Q 047630 319 FLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNK 361 (392)
Q Consensus 319 ~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~ 361 (392)
.++.++...+++|..++.... ......+.+.+.+.+.|...
T Consensus 71 ~v~~~l~~~l~~~~~vv~~s~--~~~~~~~~l~~~~~~~g~~~ 111 (289)
T 2cvz_A 71 EVAEALYPYLREGTYWVDATS--GEPEASRRLAERLREKGVTY 111 (289)
T ss_dssp HHHHHHTTTCCTTEEEEECSC--CCHHHHHHHHHHHHTTTEEE
T ss_pred HHHHHHHhhCCCCCEEEECCC--CCHHHHHHHHHHHHHcCCEE
Confidence 677888888888776553321 11122234556666656433
No 438
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=34.04 E-value=1.7e+02 Score=28.98 Aligned_cols=115 Identities=16% Similarity=0.098 Sum_probs=58.8
Q ss_pred CcccEEEEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCcc------------------EEE-eccCcCC
Q 047630 235 GTIRIGLDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVP------------------LYI-SISQRLP 293 (392)
Q Consensus 235 ~~ir~VLDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~------------------~~~-~d~~~Lp 293 (392)
+.+|+ -=||.|. |. .+..|++.|.+|++.|+|. ...+.+.+ +..+ +.. .+...
T Consensus 7 ~~~~~-~vIGlG~vG~~~A~~La~~G~~V~~~D~~~--~kv~~l~~-g~~~~~epgl~~~~~~~~~~g~l~~ttd~~e-- 80 (446)
T 4a7p_A 7 GSVRI-AMIGTGYVGLVSGACFSDFGHEVVCVDKDA--RKIELLHQ-NVMPIYEPGLDALVASNVKAGRLSFTTDLAE-- 80 (446)
T ss_dssp CCCEE-EEECCSHHHHHHHHHHHHTTCEEEEECSCS--TTHHHHTT-TCCSSCCTTHHHHHHHHHHTTCEEEESCHHH--
T ss_pred CceEE-EEEcCCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHhc-CCCCccCCCHHHHHHhhcccCCEEEECCHHH--
Confidence 44544 4566664 33 5666777899999966554 44443333 2111 111 11110
Q ss_pred CCCCcccEEEEcc-cc----cccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcC
Q 047630 294 FFDNTLDIVHSMH-VL----SNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVG 358 (392)
Q Consensus 294 f~d~sFDlV~s~~-~l----~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aG 358 (392)
.-...|+|+..- .- ..-.+-..++.+++.+.+.|++|-.++...-... ...+.+.+.+++.+
T Consensus 81 -a~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~p--gtt~~l~~~l~e~~ 147 (446)
T 4a7p_A 81 -GVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPV--GTGDEVERIIAEVA 147 (446)
T ss_dssp -HHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCT--THHHHHHHHHHHHS
T ss_pred -HHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCc--hHHHHHHHHHHHhC
Confidence 012357777652 11 1111122477888999999999877766542221 22233455555543
No 439
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=33.94 E-value=53 Score=33.30 Aligned_cols=91 Identities=12% Similarity=0.044 Sum_probs=50.4
Q ss_pred CCCCcccEEEEEcCCc-chHHHHH-HHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEccccc
Q 047630 232 KKPGTIRIGLDIGGGV-ATFAVRM-MERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLS 309 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGt-G~~a~~L-a~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~ 309 (392)
..+.++ +=+|+|. |...+.. ...|..|+++ |.+....+.+.+.|. .. .+..++ -...|+|+..-.-.
T Consensus 272 l~GktV---~IiG~G~IG~~~A~~lka~Ga~Viv~--d~~~~~~~~A~~~Ga-~~--~~l~e~---l~~aDvVi~atgt~ 340 (494)
T 3ce6_A 272 IGGKKV---LICGYGDVGKGCAEAMKGQGARVSVT--EIDPINALQAMMEGF-DV--VTVEEA---IGDADIVVTATGNK 340 (494)
T ss_dssp CTTCEE---EEECCSHHHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHHTTC-EE--CCHHHH---GGGCSEEEECSSSS
T ss_pred CCcCEE---EEEccCHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHcCC-EE--ecHHHH---HhCCCEEEECCCCH
Confidence 344455 8888865 4433333 3378888884 443444445555663 32 222221 13579998763222
Q ss_pred ccCCchhHHHHHHHHHHcccCCcEEEEEeecc
Q 047630 310 NWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFC 341 (392)
Q Consensus 310 ~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~ 341 (392)
+.. -.+..+.+|+||+++......
T Consensus 341 ~~i--------~~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 341 DII--------MLEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp CSB--------CHHHHHHSCTTCEEEECSSSG
T ss_pred HHH--------HHHHHHhcCCCcEEEEeCCCC
Confidence 211 135667799999997765543
No 440
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=32.94 E-value=1.5e+02 Score=26.72 Aligned_cols=108 Identities=11% Similarity=0.029 Sum_probs=59.9
Q ss_pred EEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhHH
Q 047630 241 LDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLH 318 (392)
Q Consensus 241 LDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~ 318 (392)
.=||+|. | .++..|++.|.+|++. |.+....+.+.+.+. .. ..+..+. -...|+|+..-. ++...+
T Consensus 5 ~iIG~G~mG~~~a~~l~~~G~~V~~~--dr~~~~~~~~~~~g~-~~-~~~~~~~---~~~aDvvi~~vp-----~~~~~~ 72 (287)
T 3pef_A 5 GFIGLGIMGSAMAKNLVKAGCSVTIW--NRSPEKAEELAALGA-ER-AATPCEV---VESCPVTFAMLA-----DPAAAE 72 (287)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEE--CSSGGGGHHHHHTTC-EE-CSSHHHH---HHHCSEEEECCS-----SHHHHH
T ss_pred EEEeecHHHHHHHHHHHHCCCeEEEE--cCCHHHHHHHHHCCC-ee-cCCHHHH---HhcCCEEEEEcC-----CHHHHH
Confidence 5678775 3 3666777789999884 454455555556553 21 1111111 023588875432 234456
Q ss_pred HHH---HHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEE
Q 047630 319 FLM---FDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 319 ~~L---~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i 362 (392)
.++ .++...+++|..++-. ..........+.+.+++.|...+
T Consensus 73 ~v~~~~~~l~~~l~~~~~vi~~--st~~~~~~~~~~~~~~~~g~~~~ 117 (287)
T 3pef_A 73 EVCFGKHGVLEGIGEGRGYVDM--STVDPATSQRIGVAVVAKGGRFL 117 (287)
T ss_dssp HHHHSTTCHHHHCCTTCEEEEC--SCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHcCcchHhhcCCCCCEEEeC--CCCCHHHHHHHHHHHHHhCCEEE
Confidence 677 7788889888765433 22222223445666777775544
No 441
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=32.55 E-value=1.1e+02 Score=28.21 Aligned_cols=110 Identities=13% Similarity=0.072 Sum_probs=57.1
Q ss_pred EEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhHH
Q 047630 241 LDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLH 318 (392)
Q Consensus 241 LDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~ 318 (392)
==||.|. | ..+..|++.|+.|++ .|.+....+...+.|. . ...+..++ -..-|+|++.-. ++...+
T Consensus 9 gfIGLG~MG~~mA~~L~~~G~~V~v--~dr~~~~~~~l~~~G~-~-~~~s~~e~---~~~~dvvi~~l~-----~~~~~~ 76 (297)
T 4gbj_A 9 AFLGLGNLGTPIAEILLEAGYELVV--WNRTASKAEPLTKLGA-T-VVENAIDA---ITPGGIVFSVLA-----DDAAVE 76 (297)
T ss_dssp EEECCSTTHHHHHHHHHHTTCEEEE--C-------CTTTTTTC-E-ECSSGGGG---CCTTCEEEECCS-----SHHHHH
T ss_pred EEEecHHHHHHHHHHHHHCCCeEEE--EeCCHHHHHHHHHcCC-e-EeCCHHHH---HhcCCceeeecc-----chhhHH
Confidence 4467665 3 367777788999998 4443344333444442 1 12222222 134588876432 223222
Q ss_pred H-HHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEE
Q 047630 319 F-LMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 319 ~-~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
. +..++...+++|++++-.... ..+...++.+.+++.|...+.-
T Consensus 77 ~v~~~~~~~~~~~~~iiid~sT~--~p~~~~~~~~~~~~~g~~~lda 121 (297)
T 4gbj_A 77 ELFSMELVEKLGKDGVHVSMSTI--SPETSRQLAQVHEWYGAHYVGA 121 (297)
T ss_dssp HHSCHHHHHHHCTTCEEEECSCC--CHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHhhcCCCeEEEECCCC--ChHHHHHHHHHHHhcCCceecC
Confidence 2 335677888998865433322 2233445777888888766543
No 442
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=32.29 E-value=30 Score=33.98 Aligned_cols=91 Identities=16% Similarity=0.145 Sum_probs=47.9
Q ss_pred EEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEec---------c------------CcCCCC
Q 047630 239 IGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISI---------S------------QRLPFF 295 (392)
Q Consensus 239 ~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d---------~------------~~Lpf~ 295 (392)
+|+=+|+|. |..++.++. .|..|++ +|.+....+.+.+.|. .+...+ . ..+.-.
T Consensus 186 kV~ViG~G~iG~~aa~~a~~lGa~V~v--~D~~~~~l~~~~~lGa-~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~ 262 (381)
T 3p2y_A 186 SALVLGVGVAGLQALATAKRLGAKTTG--YDVRPEVAEQVRSVGA-QWLDLGIDAAGEGGYARELSEAERAQQQQALEDA 262 (381)
T ss_dssp EEEEESCSHHHHHHHHHHHHHTCEEEE--ECSSGGGHHHHHHTTC-EECCCC-------------CHHHHHHHHHHHHHH
T ss_pred EEEEECchHHHHHHHHHHHHCCCEEEE--EeCCHHHHHHHHHcCC-eEEeccccccccccchhhhhHHHHhhhHHHHHHH
Confidence 348899986 555555444 7899888 4454455555555442 222100 0 011001
Q ss_pred CCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEE
Q 047630 296 DNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFW 335 (392)
Q Consensus 296 d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~li 335 (392)
-...|+|+..-.... ..... -+-+++.+.+|||++++
T Consensus 263 l~~aDIVI~tv~iPg-~~ap~--Lvt~emv~~MkpGsVIV 299 (381)
T 3p2y_A 263 ITKFDIVITTALVPG-RPAPR--LVTAAAATGMQPGSVVV 299 (381)
T ss_dssp HTTCSEEEECCCCTT-SCCCC--CBCHHHHHTSCTTCEEE
T ss_pred HhcCCEEEECCCCCC-cccce--eecHHHHhcCCCCcEEE
Confidence 146899997532211 01111 12377888999988774
No 443
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=32.10 E-value=2.7e+02 Score=27.34 Aligned_cols=132 Identities=15% Similarity=0.181 Sum_probs=67.5
Q ss_pred HHHHHHHHHhhCCC-----CcccEEEEEcCCcch-HHH-HHHHcCCEEEEEecCCCchhH-----------H----HHHh
Q 047630 221 LDFSIDEVLATKKP-----GTIRIGLDIGGGVAT-FAV-RMMERNITIVTTSMNLNGPFN-----------N----FIAS 278 (392)
Q Consensus 221 ~~~lI~~ll~l~~~-----~~ir~VLDIGCGtG~-~a~-~La~~g~~vvg~~iD~~a~~~-----------~----~aa~ 278 (392)
.+.|++.+...... ..+++|+|.+.|+|. ++. .+.+.|.+++.+..+++..+. + .+.+
T Consensus 154 ~~~Y~~~l~~~~~~~~~~~~~lkivvd~~nG~~~~~~~~~l~~lG~~v~~~~~~pdg~f~~~~~~p~~~~l~~l~~~v~~ 233 (455)
T 1wqa_A 154 IKPYIEAIKSKVDVEAIKKRKPFVVVDTSNGAGSLTLPYLLRELGCKVITVNAQPDGYFPARNPEPNEENLKEFMEIVKA 233 (455)
T ss_dssp HHHHHHHHHTTSCHHHHHHHCCEEEEECTTSGGGGTHHHHHHHHTCEEEEESCSCCTTCSSSCSCCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHhhCChhhcccCCCEEEEECCCccHHHHHHHHHHHcCCEEEEECCcCCCCCCCCCCCCchhHHHHHHHHHHH
Confidence 66777777654321 356789999999987 333 344468888765433322221 1 2222
Q ss_pred cCCccEEEe---ccCcCCCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHH
Q 047630 279 RGVVPLYIS---ISQRLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIE 355 (392)
Q Consensus 279 rg~i~~~~~---d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~ 355 (392)
.+ ..+..+ |..++-+.++ .. .+.+.+.+-.++....-.-+++|.++.+. .+. ..+.++++
T Consensus 234 ~~-adlgia~DgDaDR~~~vd~-------~G---~~l~gd~i~~lla~~l~~~~~~~~vv~tv-~ss-----~~l~~~a~ 296 (455)
T 1wqa_A 234 LG-ADFGVAQDGDADRAVFIDE-------NG---RFIQGDKTFALVADAVLKEKGGGLLVTTV-ATS-----NLLDDIAK 296 (455)
T ss_dssp HT-CSEEEEECTTSCCEEEEET-------TS---CBCCHHHHHHHHHHHHHHHHTSCEEEEET-TSC-----THHHHHHH
T ss_pred cC-CCEEEEECCCCCeEEEEeC-------CC---CEEChhHHHHHHHHHHHHhCCCCeEEEee-cCc-----HHHHHHHH
Confidence 23 233222 3333322111 01 23444544344433322223456554443 322 23666888
Q ss_pred HcCCeEEEEEEeec
Q 047630 356 SVGFNKLKWVVGRK 369 (392)
Q Consensus 356 ~aGf~~i~w~~~~k 369 (392)
+.|.+.+++.++.+
T Consensus 297 ~~g~~~~~t~tG~k 310 (455)
T 1wqa_A 297 KHGAKVMRTKVGDL 310 (455)
T ss_dssp HTTCEEEEECSSTT
T ss_pred HCCCEEEEEcCcHH
Confidence 89999998886654
No 444
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=31.60 E-value=2.6e+02 Score=25.76 Aligned_cols=109 Identities=18% Similarity=0.218 Sum_probs=61.0
Q ss_pred EEEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhH
Q 047630 240 GLDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLL 317 (392)
Q Consensus 240 VLDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l 317 (392)
|.=||+|. |. ++..|++.|.+|++ .|.+....+.+.+.|. .. ..+..+. -...|+|+..-. ++..+
T Consensus 34 I~iIG~G~mG~~~a~~l~~~G~~V~~--~dr~~~~~~~l~~~g~-~~-~~~~~e~---~~~aDvVi~~vp-----~~~~~ 101 (320)
T 4dll_A 34 ITFLGTGSMGLPMARRLCEAGYALQV--WNRTPARAASLAALGA-TI-HEQARAA---ARDADIVVSMLE-----NGAVV 101 (320)
T ss_dssp EEEECCTTTHHHHHHHHHHTTCEEEE--ECSCHHHHHHHHTTTC-EE-ESSHHHH---HTTCSEEEECCS-----SHHHH
T ss_pred EEEECccHHHHHHHHHHHhCCCeEEE--EcCCHHHHHHHHHCCC-Ee-eCCHHHH---HhcCCEEEEECC-----CHHHH
Confidence 37788885 43 67777788999988 4554455555555553 22 2222221 123588876432 22345
Q ss_pred HHHHH--HHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEE
Q 047630 318 HFLMF--DIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 318 ~~~L~--el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i 362 (392)
+.++. ++...+++|..++-..-. .....+.+.+.+.+.|...+
T Consensus 102 ~~v~~~~~~~~~l~~~~~vi~~st~--~~~~~~~~~~~~~~~g~~~~ 146 (320)
T 4dll_A 102 QDVLFAQGVAAAMKPGSLFLDMASI--TPREARDHAARLGALGIAHL 146 (320)
T ss_dssp HHHHTTTCHHHHCCTTCEEEECSCC--CHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHcchhHHhhCCCCCEEEecCCC--CHHHHHHHHHHHHHcCCEEE
Confidence 56666 677788887765443321 12223345566677675544
No 445
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=31.48 E-value=2.1e+02 Score=24.77 Aligned_cols=84 Identities=7% Similarity=-0.067 Sum_probs=48.2
Q ss_pred EEEcCCcchHHHHHHH----cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC----CCCCcccEEEEcccccccC
Q 047630 241 LDIGGGVATFAVRMME----RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP----FFDNTLDIVHSMHVLSNWI 312 (392)
Q Consensus 241 LDIGCGtG~~a~~La~----~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp----f~d~sFDlV~s~~~l~~~~ 312 (392)
+=+|+| .++..+++ .|. +++ +|.+....+.+. .+ +.++.+|..+.. ..-...|+|++...
T Consensus 13 iI~G~G--~~G~~la~~L~~~g~-v~v--id~~~~~~~~~~-~~-~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~----- 80 (234)
T 2aef_A 13 VICGWS--ESTLECLRELRGSEV-FVL--AEDENVRKKVLR-SG-ANFVHGDPTRVSDLEKANVRGARAVIVDLE----- 80 (234)
T ss_dssp EEESCC--HHHHHHHHHSTTSEE-EEE--ESCGGGHHHHHH-TT-CEEEESCTTCHHHHHHTTCTTCSEEEECCS-----
T ss_pred EEECCC--hHHHHHHHHHHhCCe-EEE--EECCHHHHHHHh-cC-CeEEEcCCCCHHHHHhcCcchhcEEEEcCC-----
Confidence 777874 55555544 566 777 455344444444 55 678888765421 11245788887532
Q ss_pred CchhHHHHHHHHHHcccCCcEEEEE
Q 047630 313 PTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 313 ~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
.......+....|.+.|+..++..
T Consensus 81 -~d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 81 -SDSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp -CHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred -CcHHHHHHHHHHHHHCCCCeEEEE
Confidence 122234556667778887666554
No 446
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=31.03 E-value=1.1e+02 Score=27.76 Aligned_cols=88 Identities=11% Similarity=0.030 Sum_probs=48.6
Q ss_pred cEEEEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhc-----------C--C-----------ccEEEeccCc
Q 047630 238 RIGLDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASR-----------G--V-----------VPLYISISQR 291 (392)
Q Consensus 238 r~VLDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-----------g--~-----------i~~~~~d~~~ 291 (392)
+.|.=||+|. | .++..+++.|.+|+..| .+....+.+.++ + . +.. ..+...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d--~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYD--INTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC--SSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEe--CCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH
Confidence 3446678876 3 36677777899999854 433433322221 1 1 111 112111
Q ss_pred CCCCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEE
Q 047630 292 LPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFW 335 (392)
Q Consensus 292 Lpf~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~li 335 (392)
. -...|+|+..-.- +.+....+++++...++|+.+++
T Consensus 82 ~---~~~aDlVi~av~~----~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 82 A---VKDADLVIEAVPE----SLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp H---TTTCSEEEECCCS----CHHHHHHHHHHHHHHSCTTCEEE
T ss_pred H---hccCCEEEEeccC----cHHHHHHHHHHHHhhCCCCcEEE
Confidence 0 1346888865321 11345578889999999887764
No 447
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=30.88 E-value=3.2e+02 Score=25.19 Aligned_cols=108 Identities=19% Similarity=0.071 Sum_probs=59.6
Q ss_pred EEEcCCc-ch-HHHHHHHcC-CEEEEEecCCCc-----hhHHHHHhcCCccEEEe-ccCcCCCCCCcccEEEEccccccc
Q 047630 241 LDIGGGV-AT-FAVRMMERN-ITIVTTSMNLNG-----PFNNFIASRGVVPLYIS-ISQRLPFFDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g-~~vvg~~iD~~a-----~~~~~aa~rg~i~~~~~-d~~~Lpf~d~sFDlV~s~~~l~~~ 311 (392)
-=||+|. |. ++..|++.| ..|++.+.+.+. ...+.+.+.|. .. +..+. -...|+|+..-.-
T Consensus 28 gvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~----~~~s~~e~---~~~aDvVi~avp~--- 97 (317)
T 4ezb_A 28 AFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV----EPLDDVAG---IACADVVLSLVVG--- 97 (317)
T ss_dssp EEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC----EEESSGGG---GGGCSEEEECCCG---
T ss_pred EEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC----CCCCHHHH---HhcCCEEEEecCC---
Confidence 6788875 33 666777789 899986544310 22233344453 22 32222 1236888765322
Q ss_pred CCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEE
Q 047630 312 IPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 312 ~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~ 363 (392)
......+.++...|++|.+++-.. .......+.+.+.+++.|...+.
T Consensus 98 ---~~~~~~~~~i~~~l~~~~ivv~~s--t~~p~~~~~~~~~l~~~g~~~~d 144 (317)
T 4ezb_A 98 ---AATKAVAASAAPHLSDEAVFIDLN--SVGPDTKALAAGAIATGKGSFVE 144 (317)
T ss_dssp ---GGHHHHHHHHGGGCCTTCEEEECC--SCCHHHHHHHHHHHHTSSCEEEE
T ss_pred ---HHHHHHHHHHHhhcCCCCEEEECC--CCCHHHHHHHHHHHHHcCCeEEe
Confidence 222345688888898877654332 22223334466677777765554
No 448
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=30.74 E-value=2.6e+02 Score=24.56 Aligned_cols=98 Identities=8% Similarity=-0.071 Sum_probs=54.2
Q ss_pred EEEEEcCC--cch---HHHHHHHcCCEEEEEecCCCchhHH---HHHh-cC--CccEEEeccCcCCC----------CCC
Q 047630 239 IGLDIGGG--VAT---FAVRMMERNITIVTTSMNLNGPFNN---FIAS-RG--VVPLYISISQRLPF----------FDN 297 (392)
Q Consensus 239 ~VLDIGCG--tG~---~a~~La~~g~~vvg~~iD~~a~~~~---~aa~-rg--~i~~~~~d~~~Lpf----------~d~ 297 (392)
++|=.|++ .|. ++..|++.|.+|+.++-+. ...+ ...+ .+ .+.++..|..+..- .-+
T Consensus 9 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (266)
T 3oig_A 9 NIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE--RLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVG 86 (266)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG--GGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 34778865 333 6778888999998865432 2111 1221 11 35667777554321 013
Q ss_pred cccEEEEcccccc---------cCCchhHH-----------HHHHHHHHcccCCcEEEEEe
Q 047630 298 TLDIVHSMHVLSN---------WIPTTLLH-----------FLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 298 sFDlV~s~~~l~~---------~~~~~~l~-----------~~L~el~RvLKPGG~lii~~ 338 (392)
.+|+++.+..... -.+.+.+. .+++.+...++++|.++...
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 87 VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 5788887654322 01222222 24566677788889886654
No 449
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=30.22 E-value=2.1e+02 Score=26.52 Aligned_cols=85 Identities=7% Similarity=-0.078 Sum_probs=49.9
Q ss_pred EEEEcCCcchHHHHHHH----cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCC----CCCCcccEEEEccccccc
Q 047630 240 GLDIGGGVATFAVRMME----RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP----FFDNTLDIVHSMHVLSNW 311 (392)
Q Consensus 240 VLDIGCGtG~~a~~La~----~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lp----f~d~sFDlV~s~~~l~~~ 311 (392)
++=+|+ |.++..+++ .|. ++. +|.+....+ +.+.+ +.++.+|..+.. ..-...|.|++...
T Consensus 118 viI~G~--G~~g~~l~~~L~~~g~-v~v--id~~~~~~~-~~~~~-~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~---- 186 (336)
T 1lnq_A 118 VVICGW--SESTLECLRELRGSEV-FVL--AEDENVRKK-VLRSG-ANFVHGDPTRVSDLEKANVRGARAVIVDLE---- 186 (336)
T ss_dssp EEEESC--CHHHHHHHTTGGGSCE-EEE--ESCGGGHHH-HHHTT-CEEEESCTTSHHHHHHTCSTTEEEEEECCS----
T ss_pred EEEECC--cHHHHHHHHHHHhCCc-EEE--EeCChhhhh-HHhCC-cEEEEeCCCCHHHHHhcChhhccEEEEcCC----
Confidence 366665 566666554 576 777 455445555 55555 688888865432 12345788876431
Q ss_pred CCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 312 IPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 312 ~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
++..........|.+.|...++..
T Consensus 187 --~d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 187 --SDSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp --SHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred --ccHHHHHHHHHHHHHCCCCeEEEE
Confidence 122223556667778887776554
No 450
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=30.18 E-value=3e+02 Score=27.05 Aligned_cols=115 Identities=15% Similarity=0.213 Sum_probs=55.6
Q ss_pred EEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEec----------cCcCCC--CCCcccEEEEcc
Q 047630 241 LDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISI----------SQRLPF--FDNTLDIVHSMH 306 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d----------~~~Lpf--~d~sFDlV~s~~ 306 (392)
-=||.|. |. .+..|++.|.+|+++| ++....+...+.. .++.... ..++.+ .-..-|+|+.+-
T Consensus 15 ~ViGlGyvGlp~A~~La~~G~~V~~~D--~~~~kv~~L~~g~-~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvii~V 91 (431)
T 3ojo_A 15 TVVGLGYIGLPTSIMFAKHGVDVLGVD--INQQTIDKLQNGQ-ISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIAV 91 (431)
T ss_dssp EEECCSTTHHHHHHHHHHTTCEEEEEC--SCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEEECC
T ss_pred EEEeeCHHHHHHHHHHHHCCCEEEEEE--CCHHHHHHHHCCC-CCcCCCCHHHHHHhhcccCceEEeCchhhCCEEEEEe
Confidence 3466664 33 5677778999999955 4445444433321 1111000 000000 012368777542
Q ss_pred -cccc-----cCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCC
Q 047630 307 -VLSN-----WIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGF 359 (392)
Q Consensus 307 -~l~~-----~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf 359 (392)
.-.. -.+-..++...+.+.+.|++|-+++....... +..++....++++.|.
T Consensus 92 pTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~p-gtt~~v~~~i~e~~g~ 149 (431)
T 3ojo_A 92 PTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAP-KTMDDFVKPVIENLGF 149 (431)
T ss_dssp CCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCT-THHHHTHHHHHHTTTC
T ss_pred CCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCCh-hHHHHHHHHHHHHcCC
Confidence 2111 11223466778889999999876654432222 2222323334555664
No 451
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=29.55 E-value=1.7e+02 Score=26.84 Aligned_cols=109 Identities=9% Similarity=0.012 Sum_probs=59.4
Q ss_pred EEEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhH
Q 047630 240 GLDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLL 317 (392)
Q Consensus 240 VLDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l 317 (392)
|-=||+|. |. ++..|++.|..|++. |.+....+.+.+.|. .. ..+..+. -...|+|+..-. ++..+
T Consensus 24 I~iIG~G~mG~~~A~~l~~~G~~V~~~--dr~~~~~~~l~~~g~-~~-~~~~~~~---~~~aDvvi~~vp-----~~~~~ 91 (310)
T 3doj_A 24 VGFLGLGIMGKAMSMNLLKNGFKVTVW--NRTLSKCDELVEHGA-SV-CESPAEV---IKKCKYTIAMLS-----DPCAA 91 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEE--CSSGGGGHHHHHTTC-EE-CSSHHHH---HHHCSEEEECCS-----SHHHH
T ss_pred EEEECccHHHHHHHHHHHHCCCeEEEE--eCCHHHHHHHHHCCC-eE-cCCHHHH---HHhCCEEEEEcC-----CHHHH
Confidence 36788875 33 677777789999884 454455555555553 21 1111111 023588876432 22344
Q ss_pred HHHH---HHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEE
Q 047630 318 HFLM---FDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 318 ~~~L---~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i 362 (392)
+.++ .++...+++|..++-.. .......+.+.+.+.+.|...+
T Consensus 92 ~~v~~~~~~l~~~l~~g~~vv~~s--t~~~~~~~~~~~~~~~~g~~~v 137 (310)
T 3doj_A 92 LSVVFDKGGVLEQICEGKGYIDMS--TVDAETSLKINEAITGKGGRFV 137 (310)
T ss_dssp HHHHHSTTCGGGGCCTTCEEEECS--CCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHhCchhhhhccCCCCEEEECC--CCCHHHHHHHHHHHHHcCCEEE
Confidence 5566 66677788876654332 2222223445666777775544
No 452
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=29.53 E-value=2.4e+02 Score=24.60 Aligned_cols=100 Identities=10% Similarity=-0.131 Sum_probs=53.4
Q ss_pred EEEEEcCC--cch---HHHHHHHcCCEEEEEecCCCch-hHHHH-HhcCCccEEEeccCcCCC----------CCCcccE
Q 047630 239 IGLDIGGG--VAT---FAVRMMERNITIVTTSMNLNGP-FNNFI-ASRGVVPLYISISQRLPF----------FDNTLDI 301 (392)
Q Consensus 239 ~VLDIGCG--tG~---~a~~La~~g~~vvg~~iD~~a~-~~~~a-a~rg~i~~~~~d~~~Lpf----------~d~sFDl 301 (392)
+||=.|++ .|. ++..|++.|..|+.++.+.... ..+.. .+.+.+.++..|..+..- .-+..|+
T Consensus 16 ~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 95 (271)
T 3ek2_A 16 RILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSLDG 95 (271)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCEEE
T ss_pred EEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 34888865 332 5667777899998865442111 11122 223446677776554210 1146899
Q ss_pred EEEccccccc----------CCchhHH-----------HHHHHHHHcccCCcEEEEEe
Q 047630 302 VHSMHVLSNW----------IPTTLLH-----------FLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 302 V~s~~~l~~~----------~~~~~l~-----------~~L~el~RvLKPGG~lii~~ 338 (392)
++.+-..... .+.++++ .+++.+.+.++++|.+++..
T Consensus 96 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 96 LVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp EEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 8877554321 2222222 24455666677788776554
No 453
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=29.09 E-value=1.3e+02 Score=27.27 Aligned_cols=108 Identities=13% Similarity=0.053 Sum_probs=58.4
Q ss_pred EEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhHH
Q 047630 241 LDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLH 318 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~ 318 (392)
-=||+|. |. ++..|++.|.+|++. |.+....+.+.+.|. .. ..+..+. -...|+|+..-. ++..++
T Consensus 5 ~iiG~G~mG~~~a~~l~~~G~~V~~~--dr~~~~~~~~~~~g~-~~-~~~~~~~---~~~advvi~~v~-----~~~~~~ 72 (287)
T 3pdu_A 5 GFLGLGIMGGPMAANLVRAGFDVTVW--NRNPAKCAPLVALGA-RQ-ASSPAEV---CAACDITIAMLA-----DPAAAR 72 (287)
T ss_dssp EEECCSTTHHHHHHHHHHHTCCEEEE--CSSGGGGHHHHHHTC-EE-CSCHHHH---HHHCSEEEECCS-----SHHHHH
T ss_pred EEEccCHHHHHHHHHHHHCCCeEEEE--cCCHHHHHHHHHCCC-ee-cCCHHHH---HHcCCEEEEEcC-----CHHHHH
Confidence 5578775 33 677777789999884 454455555555553 21 1121111 023588776432 223445
Q ss_pred HHH---HHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEE
Q 047630 319 FLM---FDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 319 ~~L---~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i 362 (392)
.++ .++...+++|..++-.. .........+.+.+++.|...+
T Consensus 73 ~v~~~~~~l~~~l~~g~~vv~~s--t~~~~~~~~~~~~~~~~g~~~~ 117 (287)
T 3pdu_A 73 EVCFGANGVLEGIGGGRGYIDMS--TVDDETSTAIGAAVTARGGRFL 117 (287)
T ss_dssp HHHHSTTCGGGTCCTTCEEEECS--CCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHcCchhhhhcccCCCEEEECC--CCCHHHHHHHHHHHHHcCCEEE
Confidence 566 66777788877654332 1122223345566777775544
No 454
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=28.98 E-value=2.6e+02 Score=24.94 Aligned_cols=98 Identities=15% Similarity=0.056 Sum_probs=53.7
Q ss_pred EEEEcCCcch---HHHHHHHcCCEEEEEecCCCchhHH----HHHhcC-CccEEEeccCcCCC----------CCCcccE
Q 047630 240 GLDIGGGVAT---FAVRMMERNITIVTTSMNLNGPFNN----FIASRG-VVPLYISISQRLPF----------FDNTLDI 301 (392)
Q Consensus 240 VLDIGCGtG~---~a~~La~~g~~vvg~~iD~~a~~~~----~aa~rg-~i~~~~~d~~~Lpf----------~d~sFDl 301 (392)
+|=.|++.|. ++..|++.|..|+.++.+. ....+ ...+.+ .+.++..|..+..- .-+..|+
T Consensus 34 ~lVTGas~GIG~aia~~la~~G~~V~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 112 (271)
T 3v2g_A 34 AFVTGGSRGIGAAIAKRLALEGAAVALTYVNA-AERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDI 112 (271)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 4888887664 6777788899988754332 22222 122222 34556666543210 0135788
Q ss_pred EEEcccccccC-----CchhHH-----------HHHHHHHHcccCCcEEEEEe
Q 047630 302 VHSMHVLSNWI-----PTTLLH-----------FLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 302 V~s~~~l~~~~-----~~~~l~-----------~~L~el~RvLKPGG~lii~~ 338 (392)
++.+-...... +.++++ .+++.+.+.++.+|.++...
T Consensus 113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 88775443211 222222 24566677788888876653
No 455
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=28.90 E-value=2.9e+02 Score=27.14 Aligned_cols=90 Identities=14% Similarity=0.167 Sum_probs=51.3
Q ss_pred cccEEEEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHh-----------cCCc---------cEEEeccCcCC
Q 047630 236 TIRIGLDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIAS-----------RGVV---------PLYISISQRLP 293 (392)
Q Consensus 236 ~ir~VLDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~-----------rg~i---------~~~~~d~~~Lp 293 (392)
.++.|.=||+|. | .++..+++.|..|+.+|.+ ....+.+.+ +|.+ .-+..+.+.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~--~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-- 111 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESD--PKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE-- 111 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSS--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGG--
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECC--HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHH--
Confidence 345568899997 4 4777788889999885543 333322111 1100 011222221
Q ss_pred CCCCcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEE
Q 047630 294 FFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFW 335 (392)
Q Consensus 294 f~d~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~li 335 (392)
-...|+|+..-. .+......++.++...++||.+++
T Consensus 112 --~~~aDlVIeaVp----e~~~~k~~v~~~l~~~~~~~~ii~ 147 (463)
T 1zcj_A 112 --LSTVDLVVEAVF----EDMNLKKKVFAELSALCKPGAFLC 147 (463)
T ss_dssp --GTTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred --HCCCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCeEEE
Confidence 134688886542 122234568888999999887764
No 456
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=28.87 E-value=1.7e+02 Score=29.08 Aligned_cols=114 Identities=14% Similarity=-0.019 Sum_probs=58.8
Q ss_pred EEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCC-ccEEEe-ccCcCCCCCCcccEEEEcccccccCCchh
Q 047630 241 LDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGV-VPLYIS-ISQRLPFFDNTLDIVHSMHVLSNWIPTTL 316 (392)
Q Consensus 241 LDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~-i~~~~~-d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~ 316 (392)
-=||+|. | .++..|++.|.+|++ .|.+....+.+.++.. ..+... +...+--.-...|+|+..-. +...
T Consensus 19 gvIGlG~MG~~lA~~La~~G~~V~v--~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp-----~~~~ 91 (480)
T 2zyd_A 19 GVVGMAVMGRNLALNIESRGYTVSI--FNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVK-----AGAG 91 (480)
T ss_dssp EEECCSHHHHHHHHHHHTTTCCEEE--ECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSC-----SSSH
T ss_pred EEEccHHHHHHHHHHHHhCCCeEEE--EeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECC-----CHHH
Confidence 6678875 3 366777778988888 4454444444443310 012111 21111000013688876432 2234
Q ss_pred HHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEE
Q 047630 317 LHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 317 l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~ 363 (392)
++.++.++...|+||..++ +.-.. .......+.+.+.+.|...+.
T Consensus 92 v~~vl~~l~~~l~~g~iII-d~s~g-~~~~t~~l~~~l~~~g~~~v~ 136 (480)
T 2zyd_A 92 TDAAIDSLKPYLDKGDIII-DGGNT-FFQDTIRRNRELSAEGFNFIG 136 (480)
T ss_dssp HHHHHHHHGGGCCTTCEEE-ECSCC-CHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhhcCCCCEEE-ECCCC-CHHHHHHHHHHHHHCCCCeeC
Confidence 5678899999998876543 32222 111222355666666766553
No 457
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=28.69 E-value=1.1e+02 Score=28.00 Aligned_cols=81 Identities=19% Similarity=0.176 Sum_probs=46.9
Q ss_pred EEEcCCc-c-hHHHHHHHcCC---EEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEEcccccccCCc
Q 047630 241 LDIGGGV-A-TFAVRMMERNI---TIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPT 314 (392)
Q Consensus 241 LDIGCGt-G-~~a~~La~~g~---~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~ 314 (392)
.=||||. | .++..+.+.|. +|+.. |.+....+.+.++ | +... .+.... -...|+|+..- ++
T Consensus 7 ~iIG~G~mG~aia~~l~~~g~~~~~V~v~--dr~~~~~~~l~~~~g-i~~~-~~~~~~---~~~aDvVilav------~p 73 (280)
T 3tri_A 7 TFIGGGNMARNIVVGLIANGYDPNRICVT--NRSLDKLDFFKEKCG-VHTT-QDNRQG---ALNADVVVLAV------KP 73 (280)
T ss_dssp EEESCSHHHHHHHHHHHHTTCCGGGEEEE--CSSSHHHHHHHHTTC-CEEE-SCHHHH---HSSCSEEEECS------CG
T ss_pred EEEcccHHHHHHHHHHHHCCCCCCeEEEE--eCCHHHHHHHHHHcC-CEEe-CChHHH---HhcCCeEEEEe------CH
Confidence 6788875 3 36667777777 77774 4544555555554 4 2322 121111 12358887643 33
Q ss_pred hhHHHHHHHHHHc-ccCCcEE
Q 047630 315 TLLHFLMFDIYRV-LRPGGLF 334 (392)
Q Consensus 315 ~~l~~~L~el~Rv-LKPGG~l 334 (392)
..++.++.++... ++++-.+
T Consensus 74 ~~~~~vl~~l~~~~l~~~~ii 94 (280)
T 3tri_A 74 HQIKMVCEELKDILSETKILV 94 (280)
T ss_dssp GGHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHhhccCCCeEE
Confidence 5567788998887 7765444
No 458
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=28.53 E-value=3.4e+02 Score=26.88 Aligned_cols=67 Identities=13% Similarity=0.204 Sum_probs=42.7
Q ss_pred ccEEEEEcC-Ccch--HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEec-cCcCCCCCCcccEEEEccccc
Q 047630 237 IRIGLDIGG-GVAT--FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISI-SQRLPFFDNTLDIVHSMHVLS 309 (392)
Q Consensus 237 ir~VLDIGC-GtG~--~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d-~~~Lpf~d~sFDlV~s~~~l~ 309 (392)
++.|+=||- |+|. .+..|.++|..|.+.|... .+..+...+.| +++..+. .+.+ ..+|+|+.+..+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~-~~~~~~l~~~g-i~~~~g~~~~~~----~~~d~vV~Spgi~ 92 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP-NSVTQHLTALG-AQIYFHHRPENV----LDASVVVVSTAIS 92 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC-CHHHHHHHHTT-CEEESSCCGGGG----TTCSEEEECTTSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC-CHHHHHHHHCC-CEEECCCCHHHc----CCCCEEEECCCCC
Confidence 344577875 4675 5777888999999977654 34444555566 4666552 2222 2489999887663
No 459
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=28.29 E-value=2.3e+02 Score=25.57 Aligned_cols=98 Identities=13% Similarity=0.094 Sum_probs=53.4
Q ss_pred EEEEcCCcch---HHHHHHHcCCEEEEEecCCCchhHH----HHHhcC-CccEEEeccCcCCC----------CCCcccE
Q 047630 240 GLDIGGGVAT---FAVRMMERNITIVTTSMNLNGPFNN----FIASRG-VVPLYISISQRLPF----------FDNTLDI 301 (392)
Q Consensus 240 VLDIGCGtG~---~a~~La~~g~~vvg~~iD~~a~~~~----~aa~rg-~i~~~~~d~~~Lpf----------~d~sFDl 301 (392)
+|=.|++.|. ++..|++.|..|+.++.+. ....+ ...+.+ .+.++..|..+..- .-+..|+
T Consensus 50 vlVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 128 (291)
T 3ijr_A 50 VLITGGDSGIGRAVSIAFAKEGANIAIAYLDE-EGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI 128 (291)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4888877663 6677777899988866554 21111 112222 34556666544210 0135788
Q ss_pred EEEccccccc------CCchhHH-----------HHHHHHHHcccCCcEEEEEe
Q 047630 302 VHSMHVLSNW------IPTTLLH-----------FLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 302 V~s~~~l~~~------~~~~~l~-----------~~L~el~RvLKPGG~lii~~ 338 (392)
++.+-..... .+.++++ .+++.+.+.++.+|.++...
T Consensus 129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 8876443211 1222222 24566677788888876654
No 460
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=28.26 E-value=2.3e+02 Score=26.50 Aligned_cols=61 Identities=11% Similarity=-0.137 Sum_probs=33.3
Q ss_pred EEEcCCc-ch--HHHHHHHc-CCEEEEEecCCCchhHHHHHh-cCCccEEEeccCcCCCCCCcccEEEEc
Q 047630 241 LDIGGGV-AT--FAVRMMER-NITIVTTSMNLNGPFNNFIAS-RGVVPLYISISQRLPFFDNTLDIVHSM 305 (392)
Q Consensus 241 LDIGCGt-G~--~a~~La~~-g~~vvg~~iD~~a~~~~~aa~-rg~i~~~~~d~~~Lpf~d~sFDlV~s~ 305 (392)
.=||||. |. ++..+.+. +++++++ .|.+....+..++ .+ ++.. .+.+++- .+...|+|+..
T Consensus 31 giIG~G~~g~~~~~~~l~~~~~~~l~av-~d~~~~~~~~~a~~~g-~~~~-~~~~~ll-~~~~~D~V~i~ 96 (350)
T 3rc1_A 31 GVIGCADIAWRRALPALEAEPLTEVTAI-ASRRWDRAKRFTERFG-GEPV-EGYPALL-ERDDVDAVYVP 96 (350)
T ss_dssp EEESCCHHHHHTHHHHHHHCTTEEEEEE-EESSHHHHHHHHHHHC-SEEE-ESHHHHH-TCTTCSEEEEC
T ss_pred EEEcCcHHHHHHHHHHHHhCCCeEEEEE-EcCCHHHHHHHHHHcC-CCCc-CCHHHHh-cCCCCCEEEEC
Confidence 6789984 43 45555554 6777653 2443344444333 35 4444 5554442 34568988864
No 461
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=27.92 E-value=31 Score=33.08 Aligned_cols=95 Identities=16% Similarity=0.114 Sum_probs=46.1
Q ss_pred cEEEEEcCCc-chHHHHHH-HcCCEEEEEecCCCchhHHHHHhcCC--ccEEEeccCcCCCCCCcccEEEEcccccccCC
Q 047630 238 RIGLDIGGGV-ATFAVRMM-ERNITIVTTSMNLNGPFNNFIASRGV--VPLYISISQRLPFFDNTLDIVHSMHVLSNWIP 313 (392)
Q Consensus 238 r~VLDIGCGt-G~~a~~La-~~g~~vvg~~iD~~a~~~~~aa~rg~--i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~ 313 (392)
.+||=+|+|. |..+..++ ..|..|++++ .+....+.+.+.+. +.....+...+.-.-..+|+|+..-.......
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~d--r~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~ 245 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFD--INVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA 245 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEe--CCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 3458999864 44444443 4788888855 43344444433321 11221111111000125899987543322101
Q ss_pred chhHHHHHHHHHHcccCCcEEEEE
Q 047630 314 TTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 314 ~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
+. .+.++..+.++|||.++..
T Consensus 246 ~~---li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 246 PI---LVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp CC---CBCHHHHTTSCTTCEEEET
T ss_pred Ce---ecCHHHHhhCCCCCEEEEE
Confidence 11 0135566789999987554
No 462
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=27.67 E-value=2.4e+02 Score=22.60 Aligned_cols=87 Identities=7% Similarity=-0.073 Sum_probs=48.2
Q ss_pred EEEcCCcchHHH----HHHHcCCEEEEEecCCCchhHHHHH---hcCCccEEEeccCcCCC----CCCcccEEEEccccc
Q 047630 241 LDIGGGVATFAV----RMMERNITIVTTSMNLNGPFNNFIA---SRGVVPLYISISQRLPF----FDNTLDIVHSMHVLS 309 (392)
Q Consensus 241 LDIGCGtG~~a~----~La~~g~~vvg~~iD~~a~~~~~aa---~rg~i~~~~~d~~~Lpf----~d~sFDlV~s~~~l~ 309 (392)
+=+|+ |.++. .|.+.|..++.++-|. ....+... ..+ +.++.+|..+... .-...|+|++...-
T Consensus 7 lI~G~--G~vG~~la~~L~~~g~~V~vid~~~-~~~~~~~~~~~~~~-~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~- 81 (153)
T 1id1_A 7 IVCGH--SILAINTILQLNQRGQNVTVISNLP-EDDIKQLEQRLGDN-ADVIPGDSNDSSVLKKAGIDRCRAILALSDN- 81 (153)
T ss_dssp EEECC--SHHHHHHHHHHHHTTCCEEEEECCC-HHHHHHHHHHHCTT-CEEEESCTTSHHHHHHHTTTTCSEEEECSSC-
T ss_pred EEECC--CHHHHHHHHHHHHCCCCEEEEECCC-hHHHHHHHHhhcCC-CeEEEcCCCCHHHHHHcChhhCCEEEEecCC-
Confidence 66776 55444 4445788898855432 22222222 234 5788887543211 12457888875421
Q ss_pred ccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 310 NWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 310 ~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
......+....|.+.|...++..
T Consensus 82 -----d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 82 -----DADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp -----HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred -----hHHHHHHHHHHHHHCCCCEEEEE
Confidence 22334666777777777776654
No 463
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=27.13 E-value=2.8e+02 Score=25.06 Aligned_cols=100 Identities=15% Similarity=0.022 Sum_probs=54.6
Q ss_pred EEEEEcCCc----ch-HHHHHHHcCCEEEEEecCCCchh-HH-HHHhcCCccEEEeccCcCCC----------CCCcccE
Q 047630 239 IGLDIGGGV----AT-FAVRMMERNITIVTTSMNLNGPF-NN-FIASRGVVPLYISISQRLPF----------FDNTLDI 301 (392)
Q Consensus 239 ~VLDIGCGt----G~-~a~~La~~g~~vvg~~iD~~a~~-~~-~aa~rg~i~~~~~d~~~Lpf----------~d~sFDl 301 (392)
++|=.|++. |. ++..|++.|..|+.++.+..... .. ...+.+.+.++..|..+..- .-+..|+
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 111 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLDF 111 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 348888743 33 67778889999988665431111 11 22223445566666554210 0146899
Q ss_pred EEEccccccc---------CCchhHH-----------HHHHHHHHcccCCcEEEEEe
Q 047630 302 VHSMHVLSNW---------IPTTLLH-----------FLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 302 V~s~~~l~~~---------~~~~~l~-----------~~L~el~RvLKPGG~lii~~ 338 (392)
++.+-..... .+.++++ .+++.+.+.++.+|.++...
T Consensus 112 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 112 VVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp EEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred EEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 8887554321 1222222 24455666777788887654
No 464
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=26.90 E-value=1.7e+02 Score=25.98 Aligned_cols=100 Identities=14% Similarity=0.076 Sum_probs=53.3
Q ss_pred EEEEEcCCcch---HHHHHHHcCCEEEEEecCCC----------chhHH----HHHhcC-CccEEEeccCcCCC------
Q 047630 239 IGLDIGGGVAT---FAVRMMERNITIVTTSMNLN----------GPFNN----FIASRG-VVPLYISISQRLPF------ 294 (392)
Q Consensus 239 ~VLDIGCGtG~---~a~~La~~g~~vvg~~iD~~----------a~~~~----~aa~rg-~i~~~~~d~~~Lpf------ 294 (392)
+||=.|++.|. ++..|++.|..|+.++.+.+ ....+ .....+ .+.++..|..+..-
T Consensus 12 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 91 (287)
T 3pxx_A 12 VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELA 91 (287)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 34778876653 66777778999888665411 11111 111222 34556666543210
Q ss_pred ----CCCcccEEEEccccccc---CCchhHH-----------HHHHHHHHcccCCcEEEEEe
Q 047630 295 ----FDNTLDIVHSMHVLSNW---IPTTLLH-----------FLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 295 ----~d~sFDlV~s~~~l~~~---~~~~~l~-----------~~L~el~RvLKPGG~lii~~ 338 (392)
.-+..|+++.+-..... .+.+.++ .+++.+.+.++.+|.++...
T Consensus 92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 92 NAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 01357888876544321 1223322 24456667777888876654
No 465
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=26.81 E-value=1.2e+02 Score=27.99 Aligned_cols=87 Identities=15% Similarity=0.121 Sum_probs=49.3
Q ss_pred EEEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEE-------------EeccCcCCCCCCcccEEEE
Q 047630 240 GLDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLY-------------ISISQRLPFFDNTLDIVHS 304 (392)
Q Consensus 240 VLDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~-------------~~d~~~Lpf~d~sFDlV~s 304 (392)
|.=||+|. | .++..|++.|.+|+. +|.+....+.+.+.+.+.+. ..+.... -..+|+|+.
T Consensus 7 i~iiG~G~~G~~~a~~L~~~g~~V~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~D~vi~ 81 (359)
T 1bg6_A 7 YAVLGLGNGGHAFAAYLALKGQSVLA--WDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---VKDADVILI 81 (359)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEE--ECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---HTTCSEEEE
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEE--EeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---HhcCCEEEE
Confidence 37789886 3 366677778888888 44434444444444211111 1111110 125788886
Q ss_pred cccccccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 305 MHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 305 ~~~l~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
.-.- ...+.++.++...+++|..++..
T Consensus 82 ~v~~------~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 82 VVPA------IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp CSCG------GGHHHHHHHHGGGCCTTCEEEES
T ss_pred eCCc------hHHHHHHHHHHHhCCCCCEEEEc
Confidence 5332 22356888898899998765544
No 466
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=26.80 E-value=1.4e+02 Score=27.58 Aligned_cols=62 Identities=13% Similarity=0.243 Sum_probs=31.5
Q ss_pred EEEcCCcch---HHHHHHHcCCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEEc
Q 047630 241 LDIGGGVAT---FAVRMMERNITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHSM 305 (392)
Q Consensus 241 LDIGCGtG~---~a~~La~~g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s~ 305 (392)
-=||||... ++..+...+.+++++ .|.+....+..+++ +.+.. ..+.+++ +.+...|+|+..
T Consensus 8 giiG~G~~~~~~~~~~l~~~~~~lvav-~d~~~~~~~~~a~~~~~~~~-~~~~~~l-l~~~~~D~V~i~ 73 (336)
T 2p2s_A 8 AAIGLAHNHIYDMCQQLIDAGAELAGV-FESDSDNRAKFTSLFPSVPF-AASAEQL-ITDASIDLIACA 73 (336)
T ss_dssp EEECCSSTHHHHHHHHHHHTTCEEEEE-ECSCTTSCHHHHHHSTTCCB-CSCHHHH-HTCTTCCEEEEC
T ss_pred EEECCChHHHHHhhhhhcCCCcEEEEE-eCCCHHHHHHHHHhcCCCcc-cCCHHHH-hhCCCCCEEEEe
Confidence 568998654 233444467887653 24434444443333 22222 2333333 134468988764
No 467
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=26.68 E-value=2.3e+02 Score=25.38 Aligned_cols=109 Identities=14% Similarity=0.170 Sum_probs=59.1
Q ss_pred EEEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhH
Q 047630 240 GLDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLL 317 (392)
Q Consensus 240 VLDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l 317 (392)
|.=||+|. |. ++..|++.|.+|+. .|.+....+.+.+.|. .. ..+.... -...|+|+..-. .+...
T Consensus 8 i~iiG~G~~G~~~a~~l~~~g~~V~~--~~~~~~~~~~~~~~g~-~~-~~~~~~~---~~~~D~vi~~v~-----~~~~~ 75 (299)
T 1vpd_A 8 VGFIGLGIMGKPMSKNLLKAGYSLVV--SDRNPEAIADVIAAGA-ET-ASTAKAI---AEQCDVIITMLP-----NSPHV 75 (299)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEE--ECSCHHHHHHHHHTTC-EE-CSSHHHH---HHHCSEEEECCS-----SHHHH
T ss_pred EEEECchHHHHHHHHHHHhCCCEEEE--EeCCHHHHHHHHHCCC-ee-cCCHHHH---HhCCCEEEEECC-----CHHHH
Confidence 37789886 33 56677778888877 4554444455555552 21 1111111 023688876432 12334
Q ss_pred HHHH---HHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEE
Q 047630 318 HFLM---FDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 318 ~~~L---~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i 362 (392)
+.++ .++...+++|..++ +. ........+.+.+.+.+.|...+
T Consensus 76 ~~~~~~~~~l~~~l~~~~~vv-~~-s~~~~~~~~~l~~~~~~~g~~~~ 121 (299)
T 1vpd_A 76 KEVALGENGIIEGAKPGTVLI-DM-SSIAPLASREISDALKAKGVEML 121 (299)
T ss_dssp HHHHHSTTCHHHHCCTTCEEE-EC-SCCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHhCcchHhhcCCCCCEEE-EC-CCCCHHHHHHHHHHHHHcCCeEE
Confidence 5566 56778889887654 32 11111223346666766676544
No 468
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=26.48 E-value=1.5e+02 Score=27.22 Aligned_cols=88 Identities=10% Similarity=0.028 Sum_probs=47.6
Q ss_pred EEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCC-cc-------EEEeccCcCCCCCCcccEEEEcccccc
Q 047630 241 LDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGV-VP-------LYISISQRLPFFDNTLDIVHSMHVLSN 310 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~-i~-------~~~~d~~~Lpf~d~sFDlV~s~~~l~~ 310 (392)
.=||+|. |. ++..|++.|.+|+.++...+....+.+.+.+. +. +...+.+++.-.-...|+|+..---
T Consensus 4 ~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~-- 81 (335)
T 1txg_A 4 SILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVST-- 81 (335)
T ss_dssp EEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSCG--
T ss_pred EEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCCh--
Confidence 6688885 43 66777778889888443003344445555542 10 1111100110001347888865322
Q ss_pred cCCchhHHHHHHHHHHcccCCcEEE
Q 047630 311 WIPTTLLHFLMFDIYRVLRPGGLFW 335 (392)
Q Consensus 311 ~~~~~~l~~~L~el~RvLKPGG~li 335 (392)
...+.++.++.. +++|..++
T Consensus 82 ----~~~~~v~~~i~~-l~~~~~vv 101 (335)
T 1txg_A 82 ----DGVLPVMSRILP-YLKDQYIV 101 (335)
T ss_dssp ----GGHHHHHHHHTT-TCCSCEEE
T ss_pred ----HHHHHHHHHHhc-CCCCCEEE
Confidence 345678888888 88877654
No 469
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=26.00 E-value=2.9e+02 Score=27.60 Aligned_cols=115 Identities=7% Similarity=-0.049 Sum_probs=60.1
Q ss_pred EEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCC--ccEE-EeccCcCCCCCCcccEEEEcccccccCCch
Q 047630 241 LDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGV--VPLY-ISISQRLPFFDNTLDIVHSMHVLSNWIPTT 315 (392)
Q Consensus 241 LDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~--i~~~-~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~ 315 (392)
-=||+|. | .++..|++.|.+|++.+ .+....+.+.+.+. ..+. ..+..++--.-..-|+|+..-. +..
T Consensus 8 giIGlG~MG~~lA~~L~~~G~~V~v~d--r~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp-----~~~ 80 (484)
T 4gwg_A 8 ALIGLAVMGQNLILNMNDHGFVVCAFN--RTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVK-----AGQ 80 (484)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEEEEC--SSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSC-----SSH
T ss_pred EEEChhHHHHHHHHHHHHCCCEEEEEe--CCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecC-----ChH
Confidence 5577765 3 35667777899998854 44455555554431 1221 1222211100013577775422 223
Q ss_pred hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEEE
Q 047630 316 LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLKW 364 (392)
Q Consensus 316 ~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~w 364 (392)
..+.++.++...|++|.+++ +.-....... ....+.+++.|...+.-
T Consensus 81 ~v~~vl~~l~~~L~~g~iII-d~st~~~~~t-~~~~~~l~~~Gi~fvd~ 127 (484)
T 4gwg_A 81 AVDDFIEKLVPLLDTGDIII-DGGNSEYRDT-TRRCRDLKAKGILFVGS 127 (484)
T ss_dssp HHHHHHHHHGGGCCTTCEEE-ECSCCCHHHH-HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEE-EcCCCCchHH-HHHHHHHHhhccccccC
Confidence 55678899999999876553 3222111122 22445667777765554
No 470
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=25.66 E-value=1.4e+02 Score=24.06 Aligned_cols=104 Identities=11% Similarity=-0.006 Sum_probs=52.5
Q ss_pred EEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHH-hcCCccEEEeccCcCC----CCCCcccEEEEcccccccCC
Q 047630 241 LDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIA-SRGVVPLYISISQRLP----FFDNTLDIVHSMHVLSNWIP 313 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa-~rg~i~~~~~d~~~Lp----f~d~sFDlV~s~~~l~~~~~ 313 (392)
+=+|+|. |. ++..|.+.|..|++++.+ ....+.+. +.+ ...+.++..+.. ..-..+|+|+..-.-
T Consensus 23 ~IiG~G~iG~~la~~L~~~g~~V~vid~~--~~~~~~~~~~~g-~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~----- 94 (155)
T 2g1u_A 23 VIFGCGRLGSLIANLASSSGHSVVVVDKN--EYAFHRLNSEFS-GFTVVGDAAEFETLKECGMEKADMVFAFTND----- 94 (155)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEEESC--GGGGGGSCTTCC-SEEEESCTTSHHHHHTTTGGGCSEEEECSSC-----
T ss_pred EEECCCHHHHHHHHHHHhCCCeEEEEECC--HHHHHHHHhcCC-CcEEEecCCCHHHHHHcCcccCCEEEEEeCC-----
Confidence 8888865 43 444555678899885543 33333333 334 345555533211 112358988875321
Q ss_pred chhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCe
Q 047630 314 TTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFN 360 (392)
Q Consensus 314 ~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~ 360 (392)
......+.++.+.+.+...++...... . ..+.++++|..
T Consensus 95 -~~~~~~~~~~~~~~~~~~~iv~~~~~~---~----~~~~l~~~G~~ 133 (155)
T 2g1u_A 95 -DSTNFFISMNARYMFNVENVIARVYDP---E----KIKIFEENGIK 133 (155)
T ss_dssp -HHHHHHHHHHHHHTSCCSEEEEECSSG---G----GHHHHHTTTCE
T ss_pred -cHHHHHHHHHHHHHCCCCeEEEEECCH---H----HHHHHHHCCCc
Confidence 222234455556555555555443211 1 22356667755
No 471
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=25.23 E-value=1.5e+02 Score=26.58 Aligned_cols=66 Identities=11% Similarity=0.104 Sum_probs=39.2
Q ss_pred CCcccEEEEEcCCcch--HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEc
Q 047630 234 PGTIRIGLDIGGGVAT--FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSM 305 (392)
Q Consensus 234 ~~~ir~VLDIGCGtG~--~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~ 305 (392)
+.++ |=||+|.=. -+..|.+.|..|+.++-++ .+.....++.+.+.++......-.+ ..+|+|+++
T Consensus 31 gk~V---LVVGgG~va~~ka~~Ll~~GA~VtVvap~~-~~~l~~l~~~~~i~~i~~~~~~~dL--~~adLVIaA 98 (223)
T 3dfz_A 31 GRSV---LVVGGGTIATRRIKGFLQEGAAITVVAPTV-SAEINEWEAKGQLRVKRKKVGEEDL--LNVFFIVVA 98 (223)
T ss_dssp TCCE---EEECCSHHHHHHHHHHGGGCCCEEEECSSC-CHHHHHHHHTTSCEEECSCCCGGGS--SSCSEEEEC
T ss_pred CCEE---EEECCCHHHHHHHHHHHHCCCEEEEECCCC-CHHHHHHHHcCCcEEEECCCCHhHh--CCCCEEEEC
Confidence 3455 999988633 2345666788888866555 2334445555556666554332222 358999875
No 472
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=25.23 E-value=2.9e+02 Score=24.45 Aligned_cols=99 Identities=21% Similarity=0.172 Sum_probs=52.2
Q ss_pred EEEEcCCcch---HHHHHHHcCCEEEEEecCCCchhHH----HHHhcC-CccEEEeccCcCCC----------CCCcccE
Q 047630 240 GLDIGGGVAT---FAVRMMERNITIVTTSMNLNGPFNN----FIASRG-VVPLYISISQRLPF----------FDNTLDI 301 (392)
Q Consensus 240 VLDIGCGtG~---~a~~La~~g~~vvg~~iD~~a~~~~----~aa~rg-~i~~~~~d~~~Lpf----------~d~sFDl 301 (392)
+|=.|++.|. ++..|++.|..|+.++... ....+ ...+.+ .+.++..|..+..- .-+..|+
T Consensus 21 ~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 99 (270)
T 3is3_A 21 ALVTGSGRGIGAAVAVHLGRLGAKVVVNYANS-TKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI 99 (270)
T ss_dssp EEESCTTSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4777776653 6667777888887744332 22221 122222 34556666443210 0135788
Q ss_pred EEEcccccccC-----CchhHH-----------HHHHHHHHcccCCcEEEEEee
Q 047630 302 VHSMHVLSNWI-----PTTLLH-----------FLMFDIYRVLRPGGLFWLDHF 339 (392)
Q Consensus 302 V~s~~~l~~~~-----~~~~l~-----------~~L~el~RvLKPGG~lii~~~ 339 (392)
++.+-...... +.++++ .+.+.+.+.++.+|.+++..-
T Consensus 100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 87664443211 222222 245666777888888876643
No 473
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=24.57 E-value=5.3e+02 Score=25.61 Aligned_cols=48 Identities=21% Similarity=0.333 Sum_probs=32.9
Q ss_pred cHHHHHHHHHhhCC-CCcccEEEEEcCCcch-HHHHH-HHcCCEEEEEecC
Q 047630 220 GLDFSIDEVLATKK-PGTIRIGLDIGGGVAT-FAVRM-MERNITIVTTSMN 267 (392)
Q Consensus 220 ~~~~lI~~ll~l~~-~~~ir~VLDIGCGtG~-~a~~L-a~~g~~vvg~~iD 267 (392)
..+.|++.+..... ...+++|+|.+.|+|. ++..+ .+.|.+++.+-.+
T Consensus 177 ~~~~Yi~~l~~~i~~~~~lkIvvD~~~Ga~~~~~~~il~~lG~~v~~~~~~ 227 (485)
T 3uw2_A 177 VADQYVERIVGDIKLTRPLKLVVDAGNGVAGPLATRLFKALGCELVELFTD 227 (485)
T ss_dssp CHHHHHHHHHTTCCCSSCCCEEEECTTSTHHHHHHHHHHHTTCCEEEESCS
T ss_pred hHHHHHHHHHHhcCcccCCEEEEEcCCCcHHHHHHHHHHHcCCeEEEecCc
Confidence 36788888876543 2458889999999987 44444 4478887764433
No 474
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=24.14 E-value=2.7e+02 Score=24.50 Aligned_cols=82 Identities=13% Similarity=0.094 Sum_probs=46.3
Q ss_pred EEEcCCc-ch-HHHHHHHcCCE-EEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEEcccccccCCchh
Q 047630 241 LDIGGGV-AT-FAVRMMERNIT-IVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTL 316 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g~~-vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~ 316 (392)
.=||+|. |. ++..+++.|.+ +.. .|.+....+.+.++ +. .. ..+.... -...|+|+..-. +..
T Consensus 14 ~iiG~G~mG~~~a~~l~~~g~~~v~~--~~~~~~~~~~~~~~~g~-~~-~~~~~~~---~~~~Dvvi~av~------~~~ 80 (266)
T 3d1l_A 14 VLIGAGNLATNLAKALYRKGFRIVQV--YSRTEESARELAQKVEA-EY-TTDLAEV---NPYAKLYIVSLK------DSA 80 (266)
T ss_dssp EEECCSHHHHHHHHHHHHHTCCEEEE--ECSSHHHHHHHHHHTTC-EE-ESCGGGS---CSCCSEEEECCC------HHH
T ss_pred EEEcCCHHHHHHHHHHHHCCCeEEEE--EeCCHHHHHHHHHHcCC-ce-eCCHHHH---hcCCCEEEEecC------HHH
Confidence 6789874 33 55666667877 666 44434444444444 42 22 2233222 124798886532 233
Q ss_pred HHHHHHHHHHcccCCcEEE
Q 047630 317 LHFLMFDIYRVLRPGGLFW 335 (392)
Q Consensus 317 l~~~L~el~RvLKPGG~li 335 (392)
.+.++.++...+++|..++
T Consensus 81 ~~~v~~~l~~~~~~~~ivv 99 (266)
T 3d1l_A 81 FAELLQGIVEGKREEALMV 99 (266)
T ss_dssp HHHHHHHHHTTCCTTCEEE
T ss_pred HHHHHHHHHhhcCCCcEEE
Confidence 4567888888888876553
No 475
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=23.77 E-value=1.1e+02 Score=28.00 Aligned_cols=103 Identities=15% Similarity=0.072 Sum_probs=49.5
Q ss_pred EEEcCCc-ch--HHHHHHH-cCCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEEcccccccCCch
Q 047630 241 LDIGGGV-AT--FAVRMME-RNITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTT 315 (392)
Q Consensus 241 LDIGCGt-G~--~a~~La~-~g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~ 315 (392)
.=||||. |. ++..+.+ .+.+++++ .|.+....+..+++ +. +. ..+.+.+- + ..|+|+..-.- .
T Consensus 10 giIG~G~~g~~~~~~~l~~~~~~~l~av-~d~~~~~~~~~a~~~~~-~~-~~~~~~ll--~-~~D~V~i~tp~------~ 77 (308)
T 3uuw_A 10 GMIGLGSIAQKAYLPILTKSERFEFVGA-FTPNKVKREKICSDYRI-MP-FDSIESLA--K-KCDCIFLHSST------E 77 (308)
T ss_dssp EEECCSHHHHHHTHHHHTSCSSSEEEEE-ECSCHHHHHHHHHHHTC-CB-CSCHHHHH--T-TCSEEEECCCG------G
T ss_pred EEEecCHHHHHHHHHHHHhCCCeEEEEE-ECCCHHHHHHHHHHcCC-CC-cCCHHHHH--h-cCCEEEEeCCc------H
Confidence 6689884 43 3444555 46777753 34544444444433 43 33 34444332 2 57988854221 1
Q ss_pred hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcC
Q 047630 316 LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVG 358 (392)
Q Consensus 316 ~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aG 358 (392)
. ...-+.++|+.|-.+++........+..+++.+..++.|
T Consensus 78 ~---h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g 117 (308)
T 3uuw_A 78 T---HYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKN 117 (308)
T ss_dssp G---HHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHT
T ss_pred h---HHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcC
Confidence 1 123334556666666555443333222333445555554
No 476
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=23.23 E-value=1.2e+02 Score=27.44 Aligned_cols=68 Identities=9% Similarity=0.015 Sum_probs=41.5
Q ss_pred EEEEEcCCcch---HHHHHHHcCCEEEEEecCCCchhHHHHHhcC-CccEEEeccCcCCC----------CCCcccEEEE
Q 047630 239 IGLDIGGGVAT---FAVRMMERNITIVTTSMNLNGPFNNFIASRG-VVPLYISISQRLPF----------FDNTLDIVHS 304 (392)
Q Consensus 239 ~VLDIGCGtG~---~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg-~i~~~~~d~~~Lpf----------~d~sFDlV~s 304 (392)
+||=-|++.|. .+..|++.|.+|+.++.+ ....+..++.+ .+.++..|..+..- .-+..|+++.
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN 81 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDID--EKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45778888875 778888899999986654 34444444433 34555666443210 1146888887
Q ss_pred cccc
Q 047630 305 MHVL 308 (392)
Q Consensus 305 ~~~l 308 (392)
+-..
T Consensus 82 NAG~ 85 (247)
T 3ged_A 82 NACR 85 (247)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 477
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=23.17 E-value=2.8e+02 Score=25.56 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=58.8
Q ss_pred EEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhHH
Q 047630 241 LDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLLH 318 (392)
Q Consensus 241 LDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l~ 318 (392)
==||.|. | ..+..|.+.|..+++ .|.+....+...+.|. . ...+..++ -...|+|+++.. +.+..+
T Consensus 7 gfIGlG~MG~~mA~~L~~~G~~v~v--~dr~~~~~~~l~~~Ga-~-~a~s~~e~---~~~~dvv~~~l~-----~~~~v~ 74 (300)
T 3obb_A 7 AFIGLGHMGAPMATNLLKAGYLLNV--FDLVQSAVDGLVAAGA-S-AARSARDA---VQGADVVISMLP-----ASQHVE 74 (300)
T ss_dssp EEECCSTTHHHHHHHHHHTTCEEEE--ECSSHHHHHHHHHTTC-E-ECSSHHHH---HTTCSEEEECCS-----CHHHHH
T ss_pred EEeeehHHHHHHHHHHHhCCCeEEE--EcCCHHHHHHHHHcCC-E-EcCCHHHH---HhcCCceeecCC-----chHHHH
Confidence 4466665 3 367777788999998 5554556666666663 1 11222221 134688876432 334444
Q ss_pred HHHHH---HHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEE
Q 047630 319 FLMFD---IYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 319 ~~L~e---l~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~ 363 (392)
.++.. +...++||-+ +|+.-.. ..+...++.+.+++.|..-+.
T Consensus 75 ~V~~~~~g~~~~~~~g~i-iId~sT~-~p~~~~~~a~~~~~~G~~~lD 120 (300)
T 3obb_A 75 GLYLDDDGLLAHIAPGTL-VLECSTI-APTSARKIHAAARERGLAMLD 120 (300)
T ss_dssp HHHHSSSSSTTSCCC-CE-EEECSCC-CHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHhchhhhhhcCCCCCE-EEECCCC-CHHHHHHHHHHHHHcCCEEEe
Confidence 55543 3445566544 4443222 223334577788888865553
No 478
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=23.07 E-value=56 Score=31.52 Aligned_cols=95 Identities=14% Similarity=0.053 Sum_probs=45.7
Q ss_pred EEEEEcCCc-chHHHHHH-HcCCEEEEEecCCCchhHHHHHh-cCC-ccEEEeccCcCCCCCCcccEEEEcccccccCCc
Q 047630 239 IGLDIGGGV-ATFAVRMM-ERNITIVTTSMNLNGPFNNFIAS-RGV-VPLYISISQRLPFFDNTLDIVHSMHVLSNWIPT 314 (392)
Q Consensus 239 ~VLDIGCGt-G~~a~~La-~~g~~vvg~~iD~~a~~~~~aa~-rg~-i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~ 314 (392)
+|+=+|+|. |..++.++ ..|..|+++| .+....+.+.+ -+. +.........+.-.-...|+|+..-.... ...
T Consensus 170 ~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d--~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~-~~t 246 (377)
T 2vhw_A 170 DVVVIGAGTAGYNAARIANGMGATVTVLD--INIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG-AKA 246 (377)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEE--SCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT-SCC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEe--CCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC-CCC
Confidence 348899864 44333333 3788888855 43333333433 232 11111111111000125799987432211 011
Q ss_pred hhHHHHHHHHHHcccCCcEEEEEe
Q 047630 315 TLLHFLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 315 ~~l~~~L~el~RvLKPGG~lii~~ 338 (392)
.. .+.+++.+.+||||+++...
T Consensus 247 ~~--li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 247 PK--LVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CC--CBCHHHHTTSCTTCEEEEGG
T ss_pred cc--eecHHHHhcCCCCcEEEEEe
Confidence 11 12466778899999886553
No 479
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=22.94 E-value=2.8e+02 Score=24.56 Aligned_cols=69 Identities=17% Similarity=0.057 Sum_probs=37.9
Q ss_pred EEEEcCC--cc--h-HHHHHHHcCCEEEEEecCCCch-hHHHHHh-cCCccEEEeccCcCCC----------CCCcccEE
Q 047630 240 GLDIGGG--VA--T-FAVRMMERNITIVTTSMNLNGP-FNNFIAS-RGVVPLYISISQRLPF----------FDNTLDIV 302 (392)
Q Consensus 240 VLDIGCG--tG--~-~a~~La~~g~~vvg~~iD~~a~-~~~~aa~-rg~i~~~~~d~~~Lpf----------~d~sFDlV 302 (392)
+|=.|++ .| . ++..|++.|.+|+.++-+.... ..+...+ .+.+.++..|..+..- .-+..|++
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 88 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFI 88 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEE
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4788865 33 2 5566677899998866554211 1122222 2335667776554210 11368988
Q ss_pred EEcccc
Q 047630 303 HSMHVL 308 (392)
Q Consensus 303 ~s~~~l 308 (392)
+.+-..
T Consensus 89 v~nAg~ 94 (275)
T 2pd4_A 89 VHSVAF 94 (275)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 877544
No 480
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=22.63 E-value=2.3e+02 Score=26.33 Aligned_cols=66 Identities=20% Similarity=0.175 Sum_probs=32.6
Q ss_pred cccEEEEEcCCc-ch-HHHHHHH--------cCCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEE
Q 047630 236 TIRIGLDIGGGV-AT-FAVRMME--------RNITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHS 304 (392)
Q Consensus 236 ~ir~VLDIGCGt-G~-~a~~La~--------~g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s 304 (392)
++|+ -=||||. |. ++..+.. .+.+++++. |.+....+..+++ + ++-...|.+++ +.+..+|+|+.
T Consensus 25 kirv-giIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~-d~~~~~a~~~a~~~g-~~~~y~d~~el-l~~~~iDaV~I 100 (393)
T 4fb5_A 25 PLGI-GLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLA-EANAGLAEARAGEFG-FEKATADWRAL-IADPEVDVVSV 100 (393)
T ss_dssp CCEE-EEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEE-CC--TTHHHHHHHHT-CSEEESCHHHH-HHCTTCCEEEE
T ss_pred CccE-EEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEE-CCCHHHHHHHHHHhC-CCeecCCHHHH-hcCCCCcEEEE
Confidence 4554 5589884 22 1222221 256777643 5544555544444 5 34444555544 23456898875
Q ss_pred c
Q 047630 305 M 305 (392)
Q Consensus 305 ~ 305 (392)
.
T Consensus 101 a 101 (393)
T 4fb5_A 101 T 101 (393)
T ss_dssp C
T ss_pred C
Confidence 4
No 481
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=22.50 E-value=2e+02 Score=28.47 Aligned_cols=113 Identities=12% Similarity=0.004 Sum_probs=56.8
Q ss_pred EEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcC-CccEEE-eccCcCCCCCCcccEEEEcccccccCCchh
Q 047630 241 LDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRG-VVPLYI-SISQRLPFFDNTLDIVHSMHVLSNWIPTTL 316 (392)
Q Consensus 241 LDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg-~i~~~~-~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~ 316 (392)
.=||+|. | .++..|++.|.+|.+ .|.+....+.+.++. ...+.. .+.+.+--.-+..|+|+..-. +...
T Consensus 9 gvIG~G~mG~~lA~~L~~~G~~V~v--~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp-----~~~~ 81 (474)
T 2iz1_A 9 GVVGMAVMGKNLALNVESRGYTVAI--YNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQ-----AGAA 81 (474)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEEE--ECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCC-----TTHH
T ss_pred EEEeeHHHHHHHHHHHHhCCCEEEE--EcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEcc-----CchH
Confidence 6678875 3 366777778888887 445444444443331 001111 122221100023688876432 2234
Q ss_pred HHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEE
Q 047630 317 LHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 317 l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i 362 (392)
++.++.++...|++|-.+ ++. ..........+.+.+.+.|...+
T Consensus 82 v~~vl~~l~~~l~~g~ii-Id~-s~~~~~~~~~l~~~l~~~g~~~v 125 (474)
T 2iz1_A 82 TDATIKSLLPLLDIGDIL-IDG-GNTHFPDTMRRNAELADSGINFI 125 (474)
T ss_dssp HHHHHHHHGGGCCTTCEE-EEC-SCCCHHHHHHHHHHTTTSSCEEE
T ss_pred HHHHHHHHHhhCCCCCEE-EEC-CCCCHHHHHHHHHHHHHCCCeEE
Confidence 567888888899887754 332 11111112234455555565554
No 482
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=22.45 E-value=66 Score=31.74 Aligned_cols=40 Identities=20% Similarity=0.213 Sum_probs=24.9
Q ss_pred EEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHHhcC
Q 047630 239 IGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIASRG 280 (392)
Q Consensus 239 ~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg 280 (392)
+|+=+|+|. |..++.++. .|..|+++|.+ ....+.+.+.|
T Consensus 192 kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~--~~~l~~~~~~G 233 (405)
T 4dio_A 192 KIFVMGAGVAGLQAIATARRLGAVVSATDVR--PAAKEQVASLG 233 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS--TTHHHHHHHTT
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEcCC--HHHHHHHHHcC
Confidence 458999986 555555554 79999885544 34444444444
No 483
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=22.39 E-value=87 Score=30.17 Aligned_cols=40 Identities=20% Similarity=0.221 Sum_probs=23.4
Q ss_pred EEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHHhcC
Q 047630 239 IGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIASRG 280 (392)
Q Consensus 239 ~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg 280 (392)
+|+=+|+|. |..++.+++ .|..|+++| .+....+.+.+-|
T Consensus 174 ~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d--~~~~~~~~~~~~G 215 (384)
T 1l7d_A 174 RVLVFGVGVAGLQAIATAKRLGAVVMATD--VRAATKEQVESLG 215 (384)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC--SCSTTHHHHHHTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEe--CCHHHHHHHHHcC
Confidence 348899876 444444444 788888855 4334444444444
No 484
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=22.26 E-value=2.4e+02 Score=25.89 Aligned_cols=111 Identities=9% Similarity=0.011 Sum_probs=54.1
Q ss_pred EEEEEcCCcch---HHHHHHHcCC-EEEEEecCCCchhHHHHHhc----C-CccEEEeccCcCCCCCCcccEEEEccccc
Q 047630 239 IGLDIGGGVAT---FAVRMMERNI-TIVTTSMNLNGPFNNFIASR----G-VVPLYISISQRLPFFDNTLDIVHSMHVLS 309 (392)
Q Consensus 239 ~VLDIGCGtG~---~a~~La~~g~-~vvg~~iD~~a~~~~~aa~r----g-~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~ 309 (392)
.+|=+|+| |. .+..|++.|+ +++. ++-+....+..+++ + .+.+...+.+++.-.-..+|+|+..-...
T Consensus 129 ~vlVlGaG-G~g~aia~~L~~~G~~~v~i--~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~G 205 (283)
T 3jyo_A 129 SVVQVGAG-GVGNAVAYALVTHGVQKLQV--ADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMG 205 (283)
T ss_dssp EEEEECCS-HHHHHHHHHHHHTTCSEEEE--ECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSSTT
T ss_pred EEEEECCc-HHHHHHHHHHHHCCCCEEEE--EECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCCC
Confidence 34889987 32 4556777887 5776 34433443322221 1 12333333222221113589999875543
Q ss_pred ccCCchhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeE
Q 047630 310 NWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNK 361 (392)
Q Consensus 310 ~~~~~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~ 361 (392)
....+.. -+ -...|+++. ++++-.|.+.+.. +.+..++.|.+.
T Consensus 206 m~~~~~~---pi--~~~~l~~~~-~v~DlvY~P~~T~---ll~~A~~~G~~~ 248 (283)
T 3jyo_A 206 MPAHPGT---AF--DVSCLTKDH-WVGDVVYMPIETE---LLKAARALGCET 248 (283)
T ss_dssp STTSCSC---SS--CGGGCCTTC-EEEECCCSSSSCH---HHHHHHHHTCCE
T ss_pred CCCCCCC---CC--CHHHhCCCC-EEEEecCCCCCCH---HHHHHHHCcCeE
Confidence 2111110 01 124566654 5566666654433 445566667543
No 485
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=22.09 E-value=3.7e+02 Score=24.24 Aligned_cols=97 Identities=13% Similarity=0.010 Sum_probs=53.3
Q ss_pred EEEEcCCc----ch-HHHHHHHcCCEEEEEecCCCchhHH----HHHhcCCccEEEeccCcCCC----------CCCccc
Q 047630 240 GLDIGGGV----AT-FAVRMMERNITIVTTSMNLNGPFNN----FIASRGVVPLYISISQRLPF----------FDNTLD 300 (392)
Q Consensus 240 VLDIGCGt----G~-~a~~La~~g~~vvg~~iD~~a~~~~----~aa~rg~i~~~~~d~~~Lpf----------~d~sFD 300 (392)
+|=.|++. |. ++..|++.|..|+.++-+ ....+ ...+.+.+.++..|+.+..- .-+..|
T Consensus 34 ~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 111 (293)
T 3grk_A 34 GLILGVANNRSIAWGIAKAAREAGAELAFTYQG--DALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKLD 111 (293)
T ss_dssp EEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS--HHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCCS
T ss_pred EEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC--HHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 48888763 22 677888899999885543 21111 11222345566666544210 114689
Q ss_pred EEEEcccccc---------cCCchhHH-----------HHHHHHHHcccCCcEEEEEe
Q 047630 301 IVHSMHVLSN---------WIPTTLLH-----------FLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 301 lV~s~~~l~~---------~~~~~~l~-----------~~L~el~RvLKPGG~lii~~ 338 (392)
+++.+-.... -.+.++++ .+++.+.+.++.+|.++...
T Consensus 112 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 112 FLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp EEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred EEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 9887755432 11222222 24556667777888886654
No 486
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=22.00 E-value=3.1e+02 Score=24.43 Aligned_cols=98 Identities=19% Similarity=0.183 Sum_probs=48.7
Q ss_pred EEEEcCCcch---HHHHHHHcCCEEEEEecCCCchhHH----HHHhcC-CccEEEeccCcCCC----------CCCcccE
Q 047630 240 GLDIGGGVAT---FAVRMMERNITIVTTSMNLNGPFNN----FIASRG-VVPLYISISQRLPF----------FDNTLDI 301 (392)
Q Consensus 240 VLDIGCGtG~---~a~~La~~g~~vvg~~iD~~a~~~~----~aa~rg-~i~~~~~d~~~Lpf----------~d~sFDl 301 (392)
+|=.|++.|. ++..|++.|.+|+.++-+. ....+ ...+.+ .+.++..|..+..- .-+..|+
T Consensus 32 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 110 (283)
T 1g0o_A 32 ALVTGAGRGIGREMAMELGRRGCKVIVNYANS-TESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI 110 (283)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-hHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3666665543 5556666888888755443 11111 122222 34455555433210 0135788
Q ss_pred EEEcccccccC-----CchhHH-----------HHHHHHHHcccCCcEEEEEe
Q 047630 302 VHSMHVLSNWI-----PTTLLH-----------FLMFDIYRVLRPGGLFWLDH 338 (392)
Q Consensus 302 V~s~~~l~~~~-----~~~~l~-----------~~L~el~RvLKPGG~lii~~ 338 (392)
++.+-...... +.++++ .+++.+.+.++.+|.++...
T Consensus 111 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 111 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 88765443211 122222 23455666667778876654
No 487
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=21.93 E-value=2.9e+02 Score=24.27 Aligned_cols=69 Identities=13% Similarity=-0.114 Sum_probs=36.8
Q ss_pred EEEEcCC--cc--h-HHHHHHHcCCEEEEEecCCCc-hhHHHHHhc-CCccEEEeccCcCC----------CCCCcccEE
Q 047630 240 GLDIGGG--VA--T-FAVRMMERNITIVTTSMNLNG-PFNNFIASR-GVVPLYISISQRLP----------FFDNTLDIV 302 (392)
Q Consensus 240 VLDIGCG--tG--~-~a~~La~~g~~vvg~~iD~~a-~~~~~aa~r-g~i~~~~~d~~~Lp----------f~d~sFDlV 302 (392)
+|=.|++ .| . ++..|++.|.+|+.++-+... ...+...+. +...++..|..+.. -.-+..|++
T Consensus 12 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 91 (265)
T 1qsg_A 12 ILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGF 91 (265)
T ss_dssp EEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4777865 23 2 556667789999886654311 111222222 33356666654321 011368988
Q ss_pred EEcccc
Q 047630 303 HSMHVL 308 (392)
Q Consensus 303 ~s~~~l 308 (392)
+.+-..
T Consensus 92 v~~Ag~ 97 (265)
T 1qsg_A 92 VHSIGF 97 (265)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 877554
No 488
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=21.84 E-value=4.2e+02 Score=26.28 Aligned_cols=85 Identities=16% Similarity=0.150 Sum_probs=49.2
Q ss_pred EEEcCCc--chHHHHHHHcCCEEEEEecCCCchhHHHHHh-----------cCCcc----------EE-EeccCcCCCCC
Q 047630 241 LDIGGGV--ATFAVRMMERNITIVTTSMNLNGPFNNFIAS-----------RGVVP----------LY-ISISQRLPFFD 296 (392)
Q Consensus 241 LDIGCGt--G~~a~~La~~g~~vvg~~iD~~a~~~~~aa~-----------rg~i~----------~~-~~d~~~Lpf~d 296 (392)
-=||+|. +.++..+++.|..|+..| .+....+.+.+ +|.+. +. ..+.+. +
T Consensus 9 gVIGaG~MG~~IA~~la~aG~~V~l~D--~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~--~-- 82 (483)
T 3mog_A 9 AVIGSGTMGAGIAEVAASHGHQVLLYD--ISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHA--L-- 82 (483)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEEEEC--SCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGG--G--
T ss_pred EEECcCHHHHHHHHHHHHCCCeEEEEE--CCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHH--h--
Confidence 5678886 347777888899999854 43444433221 33211 11 122221 1
Q ss_pred CcccEEEEcccccccCCchhHHHHHHHHHHcccCCcEEE
Q 047630 297 NTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFW 335 (392)
Q Consensus 297 ~sFDlV~s~~~l~~~~~~~~l~~~L~el~RvLKPGG~li 335 (392)
...|+|+..-. .+......++.++...++|+.+++
T Consensus 83 ~~aDlVIeAVp----e~~~vk~~v~~~l~~~~~~~~Ila 117 (483)
T 3mog_A 83 AAADLVIEAAS----ERLEVKKALFAQLAEVCPPQTLLT 117 (483)
T ss_dssp GGCSEEEECCC----CCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred cCCCEEEEcCC----CcHHHHHHHHHHHHHhhccCcEEE
Confidence 34688886431 111334578899999999988774
No 489
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=21.54 E-value=1.3e+02 Score=28.05 Aligned_cols=82 Identities=16% Similarity=0.146 Sum_probs=48.4
Q ss_pred EEEcCCc-c-hHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEE------------eccCcCCCCCCcccEEEEcc
Q 047630 241 LDIGGGV-A-TFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYI------------SISQRLPFFDNTLDIVHSMH 306 (392)
Q Consensus 241 LDIGCGt-G-~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~------------~d~~~Lpf~d~sFDlV~s~~ 306 (392)
.=||+|. | .++..|++.|.+|+.++ . ....+.+.+.|. .... .+... -..+|+|+..-
T Consensus 7 ~IiGaG~~G~~~a~~L~~~g~~V~~~~--r-~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~----~~~~D~Vilav 78 (335)
T 3ghy_A 7 CIVGAGAVGGYLGARLALAGEAINVLA--R-GATLQALQTAGL-RLTEDGATHTLPVRATHDAAA----LGEQDVVIVAV 78 (335)
T ss_dssp EEESCCHHHHHHHHHHHHTTCCEEEEC--C-HHHHHHHHHTCE-EEEETTEEEEECCEEESCHHH----HCCCSEEEECC
T ss_pred EEECcCHHHHHHHHHHHHCCCEEEEEE--C-hHHHHHHHHCCC-EEecCCCeEEEeeeEECCHHH----cCCCCEEEEeC
Confidence 7889986 3 46777888888888844 4 233344555553 2211 11111 13578887542
Q ss_pred cccccCCchhHHHHHHHHHHcccCCcEEEE
Q 047630 307 VLSNWIPTTLLHFLMFDIYRVLRPGGLFWL 336 (392)
Q Consensus 307 ~l~~~~~~~~l~~~L~el~RvLKPGG~lii 336 (392)
+...++.+++++...++++..++.
T Consensus 79 ------k~~~~~~~~~~l~~~l~~~~~iv~ 102 (335)
T 3ghy_A 79 ------KAPALESVAAGIAPLIGPGTCVVV 102 (335)
T ss_dssp ------CHHHHHHHHGGGSSSCCTTCEEEE
T ss_pred ------CchhHHHHHHHHHhhCCCCCEEEE
Confidence 224456778888888888776653
No 490
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=21.32 E-value=3e+02 Score=25.25 Aligned_cols=107 Identities=13% Similarity=0.065 Sum_probs=52.9
Q ss_pred EEEEEcCCc-ch-HHHHHHHcCC-EEEEEecCCCchhHHHHHhc-C-CccEEEeccCcCCCCCCcccEEEEcccccccCC
Q 047630 239 IGLDIGGGV-AT-FAVRMMERNI-TIVTTSMNLNGPFNNFIASR-G-VVPLYISISQRLPFFDNTLDIVHSMHVLSNWIP 313 (392)
Q Consensus 239 ~VLDIGCGt-G~-~a~~La~~g~-~vvg~~iD~~a~~~~~aa~r-g-~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~ 313 (392)
.+|=+|+|- |. .+..|++.|+ +++.++ .+....+..++. + ...+...+.+++. ..+|+|+..-......+
T Consensus 128 ~vlvlGaGg~g~aia~~L~~~G~~~v~v~~--R~~~~a~~la~~~~~~~~~~~~~~~~l~---~~aDiIInaTp~gm~~~ 202 (281)
T 3o8q_A 128 TILLIGAGGAARGVLKPLLDQQPASITVTN--RTFAKAEQLAELVAAYGEVKAQAFEQLK---QSYDVIINSTSASLDGE 202 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHTTCCSEEEEEE--SSHHHHHHHHHHHGGGSCEEEEEGGGCC---SCEEEEEECSCCCC---
T ss_pred EEEEECchHHHHHHHHHHHhcCCCeEEEEE--CCHHHHHHHHHHhhccCCeeEeeHHHhc---CCCCEEEEcCcCCCCCC
Confidence 348889872 22 4556667886 777644 433333333222 1 0122233344443 57999998754432110
Q ss_pred chhHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCe
Q 047630 314 TTLLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFN 360 (392)
Q Consensus 314 ~~~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~ 360 (392)
... +. ...+++ |.++++-.+.+.+.. +.+..++.|.+
T Consensus 203 ~~~----l~--~~~l~~-~~~V~DlvY~P~~T~---ll~~A~~~G~~ 239 (281)
T 3o8q_A 203 LPA----ID--PVIFSS-RSVCYDMMYGKGYTV---FNQWARQHGCA 239 (281)
T ss_dssp -CS----CC--GGGEEE-EEEEEESCCCSSCCH---HHHHHHHTTCS
T ss_pred CCC----CC--HHHhCc-CCEEEEecCCCccCH---HHHHHHHCCCC
Confidence 000 10 134565 455667666554332 44567777864
No 491
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=21.30 E-value=71 Score=30.52 Aligned_cols=82 Identities=10% Similarity=0.008 Sum_probs=46.7
Q ss_pred EEEEcCCc--chHHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcC-CCCCCcccEEEEcccccccCCchh
Q 047630 240 GLDIGGGV--ATFAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRL-PFFDNTLDIVHSMHVLSNWIPTTL 316 (392)
Q Consensus 240 VLDIGCGt--G~~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~L-pf~d~sFDlV~s~~~l~~~~~~~~ 316 (392)
|.=||+|. |.++..|.+.|.+|++. |.+....+.+.+.|. .. ..+.... .-.....|+|+..-. ...
T Consensus 11 IgIIG~G~mG~slA~~L~~~G~~V~~~--dr~~~~~~~a~~~G~-~~-~~~~~e~~~~a~~~aDlVilavP------~~~ 80 (341)
T 3ktd_A 11 VCILGLGLIGGSLLRDLHAANHSVFGY--NRSRSGAKSAVDEGF-DV-SADLEATLQRAAAEDALIVLAVP------MTA 80 (341)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEE--CSCHHHHHHHHHTTC-CE-ESCHHHHHHHHHHTTCEEEECSC------HHH
T ss_pred EEEEeecHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHHcCC-ee-eCCHHHHHHhcccCCCEEEEeCC------HHH
Confidence 47788885 44777778889999884 454455555666663 22 1111110 000012488876543 244
Q ss_pred HHHHHHHHHHcccCCc
Q 047630 317 LHFLMFDIYRVLRPGG 332 (392)
Q Consensus 317 l~~~L~el~RvLKPGG 332 (392)
...++.++... +||.
T Consensus 81 ~~~vl~~l~~~-~~~~ 95 (341)
T 3ktd_A 81 IDSLLDAVHTH-APNN 95 (341)
T ss_dssp HHHHHHHHHHH-CTTC
T ss_pred HHHHHHHHHcc-CCCC
Confidence 56778888775 7764
No 492
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=21.17 E-value=2.9e+02 Score=25.66 Aligned_cols=70 Identities=17% Similarity=0.138 Sum_probs=36.4
Q ss_pred CCCCcccEEEEEcCCc--ch-HHHHHHHc--CCEEEEEecCCCchhHHHHHhc-CCccEEEeccCcCCCCCCcccEEEEc
Q 047630 232 KKPGTIRIGLDIGGGV--AT-FAVRMMER--NITIVTTSMNLNGPFNNFIASR-GVVPLYISISQRLPFFDNTLDIVHSM 305 (392)
Q Consensus 232 ~~~~~ir~VLDIGCGt--G~-~a~~La~~--g~~vvg~~iD~~a~~~~~aa~r-g~i~~~~~d~~~Lpf~d~sFDlV~s~ 305 (392)
++...+++ .=||||. |. ++..+.+. +++++++ .|.+....+..+++ +. .-...+.+++- .+...|+|+..
T Consensus 14 ~~~~~irv-giIG~G~~~g~~~~~~l~~~~~~~~lvav-~d~~~~~~~~~a~~~~~-~~~~~~~~~ll-~~~~vD~V~i~ 89 (340)
T 1zh8_A 14 KPLRKIRL-GIVGCGIAARELHLPALKNLSHLFEITAV-TSRTRSHAEEFAKMVGN-PAVFDSYEELL-ESGLVDAVDLT 89 (340)
T ss_dssp --CCCEEE-EEECCSHHHHHTHHHHHHTTTTTEEEEEE-ECSSHHHHHHHHHHHSS-CEEESCHHHHH-HSSCCSEEEEC
T ss_pred CCCCceeE-EEEecCHHHHHHHHHHHHhCCCceEEEEE-EcCCHHHHHHHHHHhCC-CcccCCHHHHh-cCCCCCEEEEe
Confidence 34455544 6799993 44 55566554 4566553 35544444444433 43 33344544432 23458998865
No 493
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=20.94 E-value=43 Score=33.50 Aligned_cols=100 Identities=15% Similarity=0.047 Sum_probs=49.4
Q ss_pred cccEEEEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEec----------cCcCCCCC------C
Q 047630 236 TIRIGLDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISI----------SQRLPFFD------N 297 (392)
Q Consensus 236 ~ir~VLDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d----------~~~Lpf~d------~ 297 (392)
+..+|-=||.|. |. .+..|++.|.+|+|+|+| ....+. ..+|..++.... ..++.|.. .
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did--~~kV~~-ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~ 96 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN--PSIVER-LRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVA 96 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC--HHHHHH-HHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC--HHHHHH-HHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHh
Confidence 344446677764 32 566777899999995544 333332 233322221110 11121111 1
Q ss_pred cccEEEE-cccccc---cCCchhHHHHHHHHHHcccCC--cEEEEEe
Q 047630 298 TLDIVHS-MHVLSN---WIPTTLLHFLMFDIYRVLRPG--GLFWLDH 338 (392)
Q Consensus 298 sFDlV~s-~~~l~~---~~~~~~l~~~L~el~RvLKPG--G~lii~~ 338 (392)
.-|+++. ...... -.+-..++.+.+.+.+.||++ |.+++..
T Consensus 97 ~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~e 143 (444)
T 3vtf_A 97 ATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVK 143 (444)
T ss_dssp TSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEEC
T ss_pred cCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 2355543 222211 122245677889999999863 4555544
No 494
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=20.90 E-value=2.4e+02 Score=25.97 Aligned_cols=61 Identities=13% Similarity=0.054 Sum_probs=31.8
Q ss_pred EEEcCCc-ch-HHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEc
Q 047630 241 LDIGGGV-AT-FAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSM 305 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~ 305 (392)
.=||||. |. ++..+.+ .+.+++++ .|.+....+..+++..++ ..+.+++- .+...|+|+..
T Consensus 7 giiG~G~~g~~~~~~l~~~~~~~l~av-~d~~~~~~~~~~~~~~~~--~~~~~~~l-~~~~~D~V~i~ 70 (331)
T 4hkt_A 7 GLLGAGRIGKVHAKAVSGNADARLVAV-ADAFPAAAEAIAGAYGCE--VRTIDAIE-AAADIDAVVIC 70 (331)
T ss_dssp EEECCSHHHHHHHHHHHHCTTEEEEEE-ECSSHHHHHHHHHHTTCE--ECCHHHHH-HCTTCCEEEEC
T ss_pred EEECCCHHHHHHHHHHhhCCCcEEEEE-ECCCHHHHHHHHHHhCCC--cCCHHHHh-cCCCCCEEEEe
Confidence 5689875 33 4444555 36677652 355444444444442234 44444332 23458988764
No 495
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=20.81 E-value=2e+02 Score=27.42 Aligned_cols=67 Identities=16% Similarity=0.130 Sum_probs=34.0
Q ss_pred CcccEEEEEcCCc-ch-HHHHHHHc---------CCEEEEEecCCCchhHHHHHh-cCCccEEEeccCcCCCCCCcccEE
Q 047630 235 GTIRIGLDIGGGV-AT-FAVRMMER---------NITIVTTSMNLNGPFNNFIAS-RGVVPLYISISQRLPFFDNTLDIV 302 (392)
Q Consensus 235 ~~ir~VLDIGCGt-G~-~a~~La~~---------g~~vvg~~iD~~a~~~~~aa~-rg~i~~~~~d~~~Lpf~d~sFDlV 302 (392)
.++|+ -=||||. |. ++..+.+. +++++++. |.+....+..++ -+ ++-...|.+.+ +.+...|+|
T Consensus 25 ~klrv-giIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~-d~~~~~a~~~a~~~~-~~~~y~d~~~l-l~~~~vD~V 100 (412)
T 4gqa_A 25 ARLNI-GLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALA-DQDQAMAERHAAKLG-AEKAYGDWREL-VNDPQVDVV 100 (412)
T ss_dssp CEEEE-EEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEE-CSSHHHHHHHHHHHT-CSEEESSHHHH-HHCTTCCEE
T ss_pred ccceE-EEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEE-cCCHHHHHHHHHHcC-CCeEECCHHHH-hcCCCCCEE
Confidence 34554 5689875 32 33333331 45666633 554454444444 34 34344555544 234568988
Q ss_pred EEc
Q 047630 303 HSM 305 (392)
Q Consensus 303 ~s~ 305 (392)
+..
T Consensus 101 ~I~ 103 (412)
T 4gqa_A 101 DIT 103 (412)
T ss_dssp EEC
T ss_pred EEC
Confidence 754
No 496
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=20.77 E-value=2.7e+02 Score=27.68 Aligned_cols=94 Identities=13% Similarity=0.035 Sum_probs=51.6
Q ss_pred EEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHhcCCccEEEecc----------CcCCCCC------CcccEE
Q 047630 241 LDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIASRGVVPLYISIS----------QRLPFFD------NTLDIV 302 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~----------~~Lpf~d------~sFDlV 302 (392)
.=||+|. |. ++..|++.|.+|+++| .+....+.+.+.+. ++..... .++.+.. ...|+|
T Consensus 12 ~VIG~G~vG~~lA~~la~~G~~V~~~d--~~~~~v~~l~~~~~-~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDvv 88 (478)
T 2y0c_A 12 TIIGSGSVGLVTGACLADIGHDVFCLD--VDQAKIDILNNGGV-PIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQ 88 (478)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEEC--SCHHHHHHHHTTCC-SSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSEE
T ss_pred EEECcCHHHHHHHHHHHhCCCEEEEEE--CCHHHHHHHHCCCC-CcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCEE
Confidence 6788885 43 6778888899999954 54455444444331 1111000 0111110 235777
Q ss_pred EEcccc----cccCCchhHHHHHHHHHHcccCCcEEEEE
Q 047630 303 HSMHVL----SNWIPTTLLHFLMFDIYRVLRPGGLFWLD 337 (392)
Q Consensus 303 ~s~~~l----~~~~~~~~l~~~L~el~RvLKPGG~lii~ 337 (392)
+..-.- ..-.+...++.+++++...|++|-.++..
T Consensus 89 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 89 FIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDK 127 (478)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred EEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 754211 01112256778899999999998766544
No 497
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=20.68 E-value=3e+02 Score=25.44 Aligned_cols=107 Identities=10% Similarity=-0.028 Sum_probs=48.7
Q ss_pred EEEcCCc-ch-HHHHHHH-cCCEEEEEecCCCchhHHHHHhcCCccEEEeccCcCCCCCCcccEEEEcccccccCCchhH
Q 047630 241 LDIGGGV-AT-FAVRMME-RNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLPFFDNTLDIVHSMHVLSNWIPTTLL 317 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg~i~~~~~d~~~Lpf~d~sFDlV~s~~~l~~~~~~~~l 317 (392)
.=||||. |. ++..+.+ .+..++++ .|.+....+..+++..+.....+.+.+- .+...|+|+..-.-..
T Consensus 6 giIG~G~~g~~~~~~l~~~~~~~l~av-~d~~~~~~~~~~~~~~~~~~~~~~~~ll-~~~~~D~V~i~tp~~~------- 76 (344)
T 3ezy_A 6 GVIGLGRIGTIHAENLKMIDDAILYAI-SDVREDRLREMKEKLGVEKAYKDPHELI-EDPNVDAVLVCSSTNT------- 76 (344)
T ss_dssp EEECCSHHHHHHHHHGGGSTTEEEEEE-ECSCHHHHHHHHHHHTCSEEESSHHHHH-HCTTCCEEEECSCGGG-------
T ss_pred EEEcCCHHHHHHHHHHHhCCCcEEEEE-ECCCHHHHHHHHHHhCCCceeCCHHHHh-cCCCCCEEEEcCCCcc-------
Confidence 6688875 32 3444444 35666652 3554444444443322343344444432 2346898886432211
Q ss_pred HHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcC
Q 047630 318 HFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVG 358 (392)
Q Consensus 318 ~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aG 358 (392)
...-+..+|+.|-.+++........+..+++.++.++.|
T Consensus 77 --h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g 115 (344)
T 3ezy_A 77 --HSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKAD 115 (344)
T ss_dssp --HHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHT
T ss_pred --hHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 123333455666555555433322222223444444444
No 498
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=20.68 E-value=3.4e+02 Score=27.12 Aligned_cols=114 Identities=11% Similarity=-0.014 Sum_probs=59.1
Q ss_pred EEEcCCc-ch-HHHHHHHcCCEEEEEecCCCchhHHHHHh-cCC-ccEEEe-ccCcCCCCCCcccEEEEcccccccCCch
Q 047630 241 LDIGGGV-AT-FAVRMMERNITIVTTSMNLNGPFNNFIAS-RGV-VPLYIS-ISQRLPFFDNTLDIVHSMHVLSNWIPTT 315 (392)
Q Consensus 241 LDIGCGt-G~-~a~~La~~g~~vvg~~iD~~a~~~~~aa~-rg~-i~~~~~-d~~~Lpf~d~sFDlV~s~~~l~~~~~~~ 315 (392)
-=||+|. |. ++..|++.|.+|++. |.+....+.+.+ +.. ..+... +...+--.-...|+|+..- .+..
T Consensus 14 gvIGlG~MG~~lA~~La~~G~~V~v~--dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~V-----p~~~ 86 (497)
T 2p4q_A 14 GLIGLAVMGQNLILNAADHGFTVCAY--NRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLV-----KAGA 86 (497)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEEEE--CSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECC-----CSSH
T ss_pred EEEeeHHHHHHHHHHHHHCCCEEEEE--eCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEc-----CChH
Confidence 5678875 43 677777889999884 444455554444 210 011111 1111100001258877643 2223
Q ss_pred hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEEE
Q 047630 316 LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKLK 363 (392)
Q Consensus 316 ~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i~ 363 (392)
.++.++.++...|+||-+++ +.-.. .......+.+.+.+.|...+.
T Consensus 87 ~v~~vl~~l~~~l~~g~iII-d~s~~-~~~~~~~l~~~l~~~g~~~v~ 132 (497)
T 2p4q_A 87 PVDALINQIVPLLEKGDIII-DGGNS-HFPDSNRRYEELKKKGILFVG 132 (497)
T ss_dssp HHHHHHHHHGGGCCTTCEEE-ECSCC-CHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhCCCCCEEE-ECCCC-ChhHHHHHHHHHHHcCCceeC
Confidence 56678889999998876544 32221 111122355566677776553
No 499
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=20.67 E-value=3e+02 Score=21.40 Aligned_cols=65 Identities=6% Similarity=-0.084 Sum_probs=38.0
Q ss_pred cccEEEEcccccccC-Cch-hHHHHHHHHHHcccCCcEEEEEeecccccchHHHHHHHHHHcCCeEE
Q 047630 298 TLDIVHSMHVLSNWI-PTT-LLHFLMFDIYRVLRPGGLFWLDHFFCVGAQLEDVYVPLIESVGFNKL 362 (392)
Q Consensus 298 sFDlV~s~~~l~~~~-~~~-~l~~~L~el~RvLKPGG~lii~~~~~~~~~l~~~l~~ll~~aGf~~i 362 (392)
.+|.|+.....+... .+. .+..++..+...|+--=..++..+........+.+.+.+++.|++.+
T Consensus 45 ~~d~iiig~pty~~g~~p~~~~~~fl~~l~~~l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v 111 (138)
T 5nul_A 45 NEDILILGCSAMTDEVLEESEFEPFIEEISTKISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVV 111 (138)
T ss_dssp TCSEEEEEECCBTTTBCCTTTHHHHHHHHGGGCTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEEC
T ss_pred hCCEEEEEcCccCCCCCChHHHHHHHHHHHhhcCCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEE
Confidence 478777665544332 232 56778888776543222333443332223445668889999999876
No 500
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=20.51 E-value=70 Score=31.22 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=23.8
Q ss_pred EEEEEcCCc-chHHHHHHH-cCCEEEEEecCCCchhHHHHHhcC
Q 047630 239 IGLDIGGGV-ATFAVRMME-RNITIVTTSMNLNGPFNNFIASRG 280 (392)
Q Consensus 239 ~VLDIGCGt-G~~a~~La~-~g~~vvg~~iD~~a~~~~~aa~rg 280 (392)
+|+=+|+|. |..++.++. .|..|+++| .+....+.+.+.|
T Consensus 174 ~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D--~~~~~~~~~~~lG 215 (401)
T 1x13_A 174 KVMVIGAGVAGLAAIGAANSLGAIVRAFD--TRPEVKEQVQSMG 215 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC--SCGGGHHHHHHTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEc--CCHHHHHHHHHcC
Confidence 348899876 444555544 788888844 4344444444444
Done!