Query 047636
Match_columns 238
No_of_seqs 124 out of 695
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 23:23:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047636.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047636hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2qklb1 a.242.1.1 (B:2-91) mRN 14.5 66 0.0048 21.3 3.2 49 118-166 22-74 (90)
2 d1t3ta7 d.139.1.1 (A:817-1033) 11.8 41 0.003 25.6 1.6 20 183-202 62-83 (217)
3 d1uspa_ d.227.1.1 (A:) Organic 9.9 1.6E+02 0.011 19.6 4.3 28 16-43 39-66 (137)
4 d1ml8a_ d.227.1.2 (A:) Hypothe 9.0 1.4E+02 0.01 19.9 3.6 28 16-43 31-58 (134)
5 d1n2fa_ d.227.1.1 (A:) Organic 8.7 1.8E+02 0.013 19.5 4.2 28 16-43 44-71 (142)
6 d1ukka_ d.227.1.1 (A:) Hypothe 8.3 1.4E+02 0.01 20.2 3.4 28 16-43 40-67 (141)
7 d2pn2a1 d.227.1.1 (A:1-132) Un 7.3 1.8E+02 0.013 19.1 3.6 28 16-43 37-64 (132)
8 d1vlaa_ d.227.1.2 (A:) Hypothe 7.0 1.9E+02 0.014 19.4 3.6 28 16-43 39-66 (144)
9 d2axtl1 f.23.31.1 (L:1-37) Pho 6.2 1.5E+02 0.011 15.9 2.0 7 169-175 30-36 (37)
10 d1qwia_ d.227.1.1 (A:) Osmotic 5.9 2.3E+02 0.017 19.0 3.6 28 16-43 42-69 (142)
No 1
>d2qklb1 a.242.1.1 (B:2-91) mRNA decapping enzyme Dcp2p, N-terminal domain {Schizosaccharomyces pombe [TaxId: 4896]}
Probab=14.54 E-value=66 Score=21.28 Aligned_cols=49 Identities=8% Similarity=0.039 Sum_probs=33.0
Q ss_pred CCCccccchhHHHHHHHHHHHHHHHHHHHHH----hhccchhHHHHHHHHHHH
Q 047636 118 WPDQKTKLKLKGLYMYAAGFYTYSILALLFW----ETRRSDFVVSMTHHIATV 166 (238)
Q Consensus 118 ~P~~~~~~~~~~yYl~q~afyl~~~~~~~~~----e~~RkDf~~m~~HH~~Ti 166 (238)
=|......-++.++.+|.|+|.+.=+..... .-.-|||.+++.+|+-.+
T Consensus 22 ~P~eel~~~~rl~FqiE~A~WfY~Df~~~~~p~Lp~~~~~~Fa~~if~~cp~L 74 (90)
T d2qklb1 22 LPAEEQSSVERLCFQIEQAHWFYEDFIRAQNDQLPSLGLRVFSAKLFAHCPLL 74 (90)
T ss_dssp CCGGGSSCHHHHHHHHHHHHHHHHHTTTTTCTTSCCCCHHHHHHHHHHHCTHH
T ss_pred CCHHHhccHHHHHHHHHHHHHHHHHHhhhccCCCCCCcHHHHHHHHHHHCHHH
Confidence 5777888889999999999998642210000 112368889998886443
No 2
>d1t3ta7 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]}
Probab=11.78 E-value=41 Score=25.59 Aligned_cols=20 Identities=35% Similarity=0.586 Sum_probs=14.3
Q ss_pred eeeeeccchh--hHHHHHHHhh
Q 047636 183 VVLALHDATD--VFLEVAKMSK 202 (238)
Q Consensus 183 lVl~lHDisD--ifL~~aK~~~ 202 (238)
+|...||+|| ....++.|+-
T Consensus 62 lI~s~HDiSdGGL~~aL~EMaf 83 (217)
T d1t3ta7 62 KLLAWHDRSDGGLLVTLAEMAF 83 (217)
T ss_dssp CCSEEEECCTTHHHHHHHHHHH
T ss_pred cEEEEEecCCchHHHHHHHHhc
Confidence 5889999999 4555555554
No 3
>d1uspa_ d.227.1.1 (A:) Organic hydroperoxide resistance protein Ohr {Deinococcus radiodurans [TaxId: 1299]}
Probab=9.94 E-value=1.6e+02 Score=19.57 Aligned_cols=28 Identities=18% Similarity=0.210 Sum_probs=23.2
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 047636 16 ESFPEAKDFVALPFFAAFFAAVRLFLDR 43 (238)
Q Consensus 16 ~~~p~~~Dl~~~~~~a~~~~~~R~~~~~ 43 (238)
..-|+|.|++..-..+|....++.+.++
T Consensus 39 ~~g~~P~elllaAlasC~~~t~~~~a~~ 66 (137)
T d1uspa_ 39 GPGTNPEQLFAAGYAACFQGALGVVSRR 66 (137)
T ss_dssp CSCBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568899999999999988888877664
No 4
>d1ml8a_ d.227.1.2 (A:) Hypothetical protein in CRP region {Escherichia coli [TaxId: 562]}
Probab=9.00 E-value=1.4e+02 Score=19.92 Aligned_cols=28 Identities=14% Similarity=0.145 Sum_probs=23.9
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 047636 16 ESFPEAKDFVALPFFAAFFAAVRLFLDR 43 (238)
Q Consensus 16 ~~~p~~~Dl~~~~~~a~~~~~~R~~~~~ 43 (238)
+.-|+|.|+++.-..+|..+.++.+.++
T Consensus 31 ~~gp~P~elllaal~~C~~~~~~~~a~~ 58 (134)
T d1ml8a_ 31 DKAPSPMEMVLMAAGGCSAIDVVSILQK 58 (134)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 5679999999999999988888887664
No 5
>d1n2fa_ d.227.1.1 (A:) Organic hydroperoxide resistance protein Ohr {Pseudomonas aeruginosa, pa01 [TaxId: 287]}
Probab=8.66 E-value=1.8e+02 Score=19.48 Aligned_cols=28 Identities=14% Similarity=0.311 Sum_probs=23.2
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 047636 16 ESFPEAKDFVALPFFAAFFAAVRLFLDR 43 (238)
Q Consensus 16 ~~~p~~~Dl~~~~~~a~~~~~~R~~~~~ 43 (238)
+.-|+|.|++..-+.+|..+.++.+.++
T Consensus 44 ~~g~~P~elllaalasC~~~t~~~~a~~ 71 (142)
T d1n2fa_ 44 GAATNPEQLFAAGYSACFIGAMKFVAGQ 71 (142)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568899999999999988888887765
No 6
>d1ukka_ d.227.1.1 (A:) Hypothetical protein MPN625 {Thermus thermophilus [TaxId: 274]}
Probab=8.26 E-value=1.4e+02 Score=20.17 Aligned_cols=28 Identities=18% Similarity=0.229 Sum_probs=23.6
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 047636 16 ESFPEAKDFVALPFFAAFFAAVRLFLDR 43 (238)
Q Consensus 16 ~~~p~~~Dl~~~~~~a~~~~~~R~~~~~ 43 (238)
..-|+|.|++..-+.+|....++.+.++
T Consensus 40 ~~gp~P~elllaala~C~~~~~~~~a~~ 67 (141)
T d1ukka_ 40 GEGTNPEELIAAAHAGCFSMALAASLER 67 (141)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568899999999999988888887765
No 7
>d2pn2a1 d.227.1.1 (A:1-132) Uncharacterized protein Psyc0566 {Psychrobacter arcticus 273-4 [TaxId: 259536]}
Probab=7.30 E-value=1.8e+02 Score=19.14 Aligned_cols=28 Identities=7% Similarity=0.102 Sum_probs=23.4
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 047636 16 ESFPEAKDFVALPFFAAFFAAVRLFLDR 43 (238)
Q Consensus 16 ~~~p~~~Dl~~~~~~a~~~~~~R~~~~~ 43 (238)
+.-|+|.|+++.-+.+|....++.+.++
T Consensus 37 ~~g~~P~eLllaala~C~~~~~~~~a~~ 64 (132)
T d2pn2a1 37 GEAFSPTDLLATSLASCMLTIIGIKARD 64 (132)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999988888877665
No 8
>d1vlaa_ d.227.1.2 (A:) Hypothetical protein TM0919 {Thermotoga maritima [TaxId: 2336]}
Probab=7.01 E-value=1.9e+02 Score=19.35 Aligned_cols=28 Identities=14% Similarity=0.176 Sum_probs=23.2
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 047636 16 ESFPEAKDFVALPFFAAFFAAVRLFLDR 43 (238)
Q Consensus 16 ~~~p~~~Dl~~~~~~a~~~~~~R~~~~~ 43 (238)
+.-|+|.|+++.-+.+|..+.++.+..+
T Consensus 39 ~~g~~P~elllaala~C~~~~~~~~a~~ 66 (144)
T d1vlaa_ 39 DAAPRPLELVLTGLMGCTGMDVVSILRK 66 (144)
T ss_dssp SCSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4678999999999999988888877654
No 9
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=6.16 E-value=1.5e+02 Score=15.92 Aligned_cols=7 Identities=57% Similarity=0.837 Sum_probs=3.0
Q ss_pred HHHHhhc
Q 047636 169 LALSYIF 175 (238)
Q Consensus 169 i~~SY~~ 175 (238)
+..||.+
T Consensus 30 LFssYfF 36 (37)
T d2axtl1 30 LFSSYFF 36 (37)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 3444443
No 10
>d1qwia_ d.227.1.1 (A:) Osmotically inducible protein OsmC {Escherichia coli [TaxId: 562]}
Probab=5.90 E-value=2.3e+02 Score=18.98 Aligned_cols=28 Identities=21% Similarity=0.317 Sum_probs=24.1
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 047636 16 ESFPEAKDFVALPFFAAFFAAVRLFLDR 43 (238)
Q Consensus 16 ~~~p~~~Dl~~~~~~a~~~~~~R~~~~~ 43 (238)
..-|+|.|++..-..+|....+|.+.++
T Consensus 42 ~~G~~P~elllaAlasC~~~~~~~~a~~ 69 (142)
T d1qwia_ 42 EKGTNPEELIGAAHAACFSMALSLMLGE 69 (142)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4458999999999999999999988776
Done!