Query 047641
Match_columns 132
No_of_seqs 113 out of 2273
Neff 11.3
Searched_HMMs 29240
Date Mon Mar 25 23:28:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047641.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047641hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 5.4E-34 1.8E-38 170.5 14.2 126 1-131 12-145 (169)
2 2y1l_E Darpin-8.4; hydrolase-i 100.0 8.6E-30 2.9E-34 152.1 13.9 125 2-131 23-155 (169)
3 3v31_A Ankyrin repeat family A 100.0 1.8E-29 6.3E-34 150.3 13.4 125 2-131 12-144 (167)
4 1awc_B Protein (GA binding pro 100.0 2.4E-29 8.1E-34 148.0 13.6 124 2-131 11-142 (153)
5 4b93_B Ankyrin repeat domain-c 100.0 6.3E-30 2.2E-34 162.9 11.9 124 3-131 96-227 (269)
6 3v30_A DNA-binding protein rfx 100.0 2.6E-29 8.8E-34 150.3 13.7 125 2-131 11-144 (172)
7 3f6q_A Integrin-linked protein 100.0 7.3E-29 2.5E-33 149.3 13.7 125 2-131 14-147 (179)
8 2rfm_A Putative ankyrin repeat 100.0 3.8E-29 1.3E-33 151.9 12.0 125 2-131 44-176 (192)
9 3twr_A Tankyrase-2; ankyrin re 100.0 8.2E-29 2.8E-33 147.2 12.7 125 2-131 17-150 (165)
10 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.8E-29 1.6E-33 147.7 11.0 124 2-131 14-146 (162)
11 2rfa_A Transient receptor pote 100.0 2.2E-28 7.6E-33 152.2 14.3 129 2-131 12-163 (232)
12 4b93_B Ankyrin repeat domain-c 100.0 6.9E-29 2.3E-33 158.1 11.4 121 7-132 67-195 (269)
13 3aji_A 26S proteasome non-ATPa 100.0 8.6E-28 2.9E-32 149.5 13.9 123 3-130 50-180 (231)
14 2xai_A ASB-9, ankyrin repeat a 100.0 9.4E-28 3.2E-32 152.1 13.6 124 2-131 12-143 (261)
15 1oy3_D Transcription factor in 100.0 5.4E-28 1.9E-32 154.0 11.7 64 68-131 171-234 (282)
16 1yyh_A HN1;, notch 1, ankyrin 100.0 9.4E-28 3.2E-32 151.4 12.5 124 3-131 67-232 (253)
17 3aji_A 26S proteasome non-ATPa 100.0 2E-27 6.7E-32 147.8 13.6 125 2-131 82-214 (231)
18 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.3E-27 4.5E-32 140.7 12.1 123 2-131 11-142 (156)
19 2dzn_A Probable 26S proteasome 100.0 1.9E-27 6.7E-32 147.5 13.4 124 3-131 82-217 (228)
20 1yyh_A HN1;, notch 1, ankyrin 100.0 1.1E-27 3.8E-32 151.1 12.5 106 2-112 133-246 (253)
21 2f8y_A Notch homolog 1, transl 100.0 2.9E-27 9.9E-32 146.4 14.1 123 3-130 35-166 (223)
22 3b7b_A Euchromatic histone-lys 100.0 2.8E-27 9.4E-32 147.7 13.9 125 2-131 86-219 (237)
23 1s70_B 130 kDa myosin-binding 100.0 2E-27 6.8E-32 152.7 13.3 61 69-130 213-273 (299)
24 1s70_B 130 kDa myosin-binding 100.0 3E-27 1E-31 151.9 13.8 126 2-131 49-241 (299)
25 1ikn_D Protein (I-kappa-B-alph 100.0 1.2E-27 4.2E-32 149.4 11.1 129 2-131 54-193 (236)
26 2f8y_A Notch homolog 1, transl 100.0 7.2E-27 2.5E-31 144.6 14.1 126 2-132 67-201 (223)
27 3d9h_A CDNA FLJ77766, highly s 100.0 5.2E-27 1.8E-31 150.4 13.7 124 2-131 68-199 (285)
28 4gpm_A Engineered protein OR26 100.0 3.7E-27 1.3E-31 140.8 12.2 111 2-117 46-164 (169)
29 1oy3_D Transcription factor in 100.0 3.9E-27 1.3E-31 150.0 13.1 125 2-131 18-201 (282)
30 3hra_A Ankyrin repeat family p 100.0 4.5E-27 1.5E-31 143.5 12.8 123 3-130 15-148 (201)
31 2dzn_A Probable 26S proteasome 99.9 7.6E-27 2.6E-31 144.8 13.8 124 3-131 46-183 (228)
32 3hra_A Ankyrin repeat family p 99.9 7.8E-27 2.7E-31 142.4 13.3 125 2-131 48-187 (201)
33 1k1a_A B-cell lymphoma 3-encod 99.9 9.5E-27 3.3E-31 145.4 13.5 122 4-130 90-224 (241)
34 2rfa_A Transient receptor pote 99.9 1E-26 3.6E-31 144.7 13.5 129 2-131 46-206 (232)
35 2xai_A ASB-9, ankyrin repeat a 99.9 7.4E-27 2.5E-31 148.0 13.0 127 3-131 46-208 (261)
36 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-26 4.8E-31 133.8 12.7 106 21-131 5-118 (137)
37 1k1a_A B-cell lymphoma 3-encod 99.9 1.9E-26 6.4E-31 144.1 14.1 125 3-131 56-192 (241)
38 3b7b_A Euchromatic histone-lys 99.9 1.7E-26 5.8E-31 144.1 13.8 124 3-131 21-186 (237)
39 1n11_A Ankyrin; clathrin, BAND 99.9 1.1E-26 3.6E-31 156.2 13.4 125 2-131 254-386 (437)
40 2etb_A Transient receptor pote 99.9 3.6E-27 1.2E-31 148.8 10.4 125 3-132 56-231 (256)
41 1d9s_A Cyclin-dependent kinase 99.9 1.5E-26 5.1E-31 133.6 12.1 110 17-131 3-120 (136)
42 3jxi_A Vanilloid receptor-rela 99.9 5.1E-27 1.8E-31 148.3 10.7 126 2-132 58-235 (260)
43 1sw6_A Regulatory protein SWI6 99.9 2.1E-27 7.1E-32 154.9 9.1 126 2-132 140-326 (327)
44 4hbd_A KN motif and ankyrin re 99.9 8.2E-27 2.8E-31 149.0 11.5 124 3-131 121-259 (276)
45 3kea_A K1L; tropism, ANK repea 99.9 7.4E-27 2.5E-31 149.7 10.8 125 1-131 70-204 (285)
46 3ljn_A Hypothetical protein; a 99.9 6.3E-27 2.2E-31 154.2 10.6 125 2-131 93-253 (364)
47 2etb_A Transient receptor pote 99.9 8.7E-27 3E-31 147.1 10.5 129 2-131 11-181 (256)
48 2pnn_A Transient receptor pote 99.9 1.2E-26 4E-31 147.7 10.8 126 2-132 66-243 (273)
49 3d9h_A CDNA FLJ77766, highly s 99.9 4.9E-26 1.7E-30 145.9 13.6 127 3-131 102-264 (285)
50 4hbd_A KN motif and ankyrin re 99.9 3E-26 1E-30 146.4 12.0 124 3-131 86-225 (276)
51 1n11_A Ankyrin; clathrin, BAND 99.9 5.1E-26 1.7E-30 152.9 12.8 125 2-131 221-353 (437)
52 3utm_A Tankyrase-1; tankyrase, 99.9 1.2E-25 4E-30 146.8 14.2 62 69-131 228-289 (351)
53 1wdy_A 2-5A-dependent ribonucl 99.9 1.7E-25 5.7E-30 142.4 14.3 125 2-131 14-157 (285)
54 1bi7_B P16INK4A, MTS1, multipl 99.9 6E-27 2.1E-31 138.1 6.9 121 2-128 21-150 (156)
55 3ljn_A Hypothetical protein; a 99.9 5E-26 1.7E-30 149.9 12.0 129 2-131 29-220 (364)
56 3t8k_A Uncharacterized protein 99.9 3.3E-27 1.1E-31 143.0 5.9 123 2-131 15-163 (186)
57 3eu9_A Huntingtin-interacting 99.9 8.6E-26 3E-30 140.7 12.0 125 3-131 86-219 (240)
58 2vge_A RELA-associated inhibit 99.9 3.2E-27 1.1E-31 147.3 4.9 108 3-114 31-148 (229)
59 3aaa_C Myotrophin, protein V-1 99.9 2.3E-25 7.8E-30 126.6 11.6 104 23-131 4-115 (123)
60 3eu9_A Huntingtin-interacting 99.9 4.8E-25 1.6E-29 137.3 14.0 125 2-131 18-151 (240)
61 1ycs_B 53BP2, P53BP2; ankyrin 99.9 7.6E-26 2.6E-30 141.7 10.4 122 2-129 14-144 (239)
62 1wdy_A 2-5A-dependent ribonucl 99.9 5E-25 1.7E-29 140.2 14.1 124 3-130 49-190 (285)
63 1bi7_B P16INK4A, MTS1, multipl 99.9 2.7E-25 9.2E-30 131.1 11.9 108 19-131 5-120 (156)
64 4g8k_A 2-5A-dependent ribonucl 99.9 4.7E-25 1.6E-29 144.0 14.1 125 2-131 34-177 (337)
65 2vge_A RELA-associated inhibit 99.9 3E-25 1E-29 138.4 11.9 116 9-129 1-128 (229)
66 1ikn_D Protein (I-kappa-B-alph 99.9 1.2E-26 4.3E-31 144.8 5.0 126 2-131 17-160 (236)
67 3v30_A DNA-binding protein rfx 99.9 3.2E-25 1.1E-29 132.5 10.6 119 2-125 45-171 (172)
68 2rfm_A Putative ankyrin repeat 99.9 3.7E-25 1.3E-29 134.3 11.0 108 19-131 28-143 (192)
69 3kea_A K1L; tropism, ANK repea 99.9 9E-25 3.1E-29 140.1 13.2 119 5-131 11-138 (285)
70 2jab_A H10-2-G3; HER2, darpin, 99.9 6.1E-25 2.1E-29 126.8 11.1 103 24-131 12-122 (136)
71 2fo1_E LIN-12 protein; beta-ba 99.9 3.8E-25 1.3E-29 146.4 11.5 128 3-131 209-355 (373)
72 4g8k_A 2-5A-dependent ribonucl 99.9 1.1E-24 3.7E-29 142.3 13.4 125 2-131 134-282 (337)
73 2pnn_A Transient receptor pote 99.9 1.7E-25 5.8E-30 142.4 9.3 129 2-131 22-193 (273)
74 3jxi_A Vanilloid receptor-rela 99.9 1.4E-25 4.7E-30 141.8 8.2 129 2-131 14-185 (260)
75 2fo1_E LIN-12 protein; beta-ba 99.9 4.8E-25 1.6E-29 145.9 11.0 126 2-131 175-322 (373)
76 3utm_A Tankyrase-1; tankyrase, 99.9 1.3E-24 4.5E-29 141.9 12.7 125 2-131 33-166 (351)
77 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.9E-24 1.3E-28 121.4 12.9 100 26-130 2-109 (126)
78 2b0o_E UPLC1; arfgap, structur 99.9 5.4E-25 1.8E-29 142.1 10.0 119 2-131 160-295 (301)
79 1d9s_A Cyclin-dependent kinase 99.9 3.7E-25 1.3E-29 127.7 8.4 107 2-114 21-136 (136)
80 2jab_A H10-2-G3; HER2, darpin, 99.9 3.1E-24 1E-28 123.9 11.9 106 2-112 23-136 (136)
81 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.1E-23 3.9E-28 124.5 13.2 107 4-114 48-162 (162)
82 3deo_A Signal recognition part 99.9 1.1E-24 3.9E-29 131.4 9.0 104 23-131 41-152 (183)
83 3ehr_A Osteoclast-stimulating 99.9 1.9E-24 6.5E-29 133.9 10.2 106 21-131 68-182 (222)
84 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.9E-24 3E-28 120.0 12.1 108 2-114 11-126 (126)
85 3v31_A Ankyrin repeat family A 99.9 1.2E-23 4.1E-28 125.1 12.3 102 25-131 2-111 (167)
86 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6.3E-25 2.1E-29 137.6 7.1 125 2-131 46-190 (239)
87 3ui2_A Signal recognition part 99.9 4E-24 1.4E-28 134.4 10.2 104 23-131 42-153 (244)
88 1sw6_A Regulatory protein SWI6 99.9 2.1E-24 7.2E-29 140.7 7.6 103 5-112 109-228 (327)
89 3lvq_E ARF-GAP with SH3 domain 99.9 3.9E-23 1.3E-27 141.3 12.4 116 2-122 141-273 (497)
90 3f6q_A Integrin-linked protein 99.9 2.1E-23 7.3E-28 125.3 9.1 116 2-122 48-171 (179)
91 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.3E-22 4.4E-27 120.9 12.2 106 2-112 56-169 (169)
92 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.5E-22 8.5E-27 118.1 13.3 105 1-111 43-155 (156)
93 2l6b_A NR1C; ankyrin, consensu 99.9 4.6E-23 1.6E-27 115.7 8.1 103 20-127 3-113 (115)
94 1awc_B Protein (GA binding pro 99.9 3.6E-22 1.2E-26 117.2 11.4 102 2-108 43-152 (153)
95 3t8k_A Uncharacterized protein 99.9 1.9E-22 6.5E-27 122.1 10.0 110 5-119 54-184 (186)
96 3twr_A Tankyrase-2; ankyrin re 99.9 1E-22 3.5E-27 120.8 8.6 106 2-113 51-164 (165)
97 1dcq_A PYK2-associated protein 99.9 5.8E-22 2E-26 126.7 12.1 108 2-114 139-263 (278)
98 1n0q_A 3ANK, 3 ankyrin repeats 99.9 8.6E-22 3E-26 106.7 11.0 85 25-114 1-93 (93)
99 3jue_A Arfgap with coiled-coil 99.9 9.2E-22 3.2E-26 130.0 13.0 123 2-129 208-344 (368)
100 3ehr_A Osteoclast-stimulating 99.9 5.4E-23 1.8E-27 127.4 5.8 117 2-123 82-207 (222)
101 3jue_A Arfgap with coiled-coil 99.9 2.3E-21 7.9E-26 128.1 10.3 103 24-131 197-310 (368)
102 3aaa_C Myotrophin, protein V-1 99.9 1.1E-21 3.7E-26 111.3 7.2 95 2-101 16-118 (123)
103 3c5r_A BARD-1, BRCA1-associate 99.9 3.4E-22 1.2E-26 115.3 4.0 107 2-113 19-133 (137)
104 2b0o_E UPLC1; arfgap, structur 99.9 2.5E-20 8.5E-25 120.4 13.0 105 26-131 151-268 (301)
105 3lvq_E ARF-GAP with SH3 domain 99.8 2E-20 6.7E-25 128.0 12.9 105 26-131 132-249 (497)
106 3deo_A Signal recognition part 99.8 7.2E-21 2.5E-25 114.7 8.9 93 2-100 53-154 (183)
107 2zgd_A 3 repeat synthetic anky 99.8 1.6E-20 5.4E-25 104.7 7.9 83 19-131 17-99 (110)
108 1dcq_A PYK2-associated protein 99.8 8.1E-20 2.8E-24 116.8 11.7 105 26-131 130-247 (278)
109 2aja_A Ankyrin repeat family p 99.8 3E-22 1E-26 132.7 -4.1 120 3-131 102-234 (376)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.8 4.9E-18 1.7E-22 91.7 8.4 63 68-131 15-77 (93)
111 2aja_A Ankyrin repeat family p 99.8 4.1E-20 1.4E-24 122.5 -0.1 107 23-131 89-208 (376)
112 2zgd_A 3 repeat synthetic anky 99.7 1.1E-17 3.6E-22 93.1 8.2 77 2-108 33-109 (110)
113 3ui2_A Signal recognition part 99.7 1.5E-18 5E-23 109.0 4.7 97 26-131 15-120 (244)
114 2l6b_A NR1C; ankyrin, consensu 99.7 2.9E-17 1E-21 91.8 3.8 87 2-93 18-112 (115)
115 3zrh_A Ubiquitin thioesterase 66.9 17 0.00057 24.9 5.3 47 3-49 32-92 (454)
116 1gp8_A Protein (scaffolding pr 49.0 17 0.00057 15.6 2.1 19 29-47 16-34 (40)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.4e-34 Score=170.54 Aligned_cols=126 Identities=26% Similarity=0.374 Sum_probs=120.9
Q ss_pred CCcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHH
Q 047641 1 TKNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 1 a~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
+++|+.++|+.|++.|.+++.+|..|.||||+|+..++.+++++|++.|++++ .++..|+||+ .++++
T Consensus 12 a~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~----~~d~~g~TpLh~A~~~g~~~~v~ 87 (169)
T 4gpm_A 12 AENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVN----AKDSDGRTPLHHAAENGHKEVVK 87 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchh----hhccCCCCHHHHHHHcCCHHHHH
Confidence 36799999999999999999999999999999999999999999999999998 7889999999 89999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|++.|++++ .++..|+||||+|+..|+.+++++|+++|++++..|.+|+||||+|++
T Consensus 88 ~Ll~~gadvn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~ 145 (169)
T 4gpm_A 88 LLISKGADVN-AKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLARE 145 (169)
T ss_dssp HHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHCcCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 9999999988 788999999999999999999999999999999999999999999986
No 2
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=8.6e-30 Score=152.12 Aligned_cols=125 Identities=25% Similarity=0.285 Sum_probs=119.0
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.+|+ .+++++
T Consensus 23 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~~~~ 98 (169)
T 2y1l_E 23 RAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN----AVDHAGMTPLRLAALFGHLEIVEV 98 (169)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----ccCCCCCCHHHHHHHcCCHHHHHH
Confidence 5789999999999999999999999999999999999999999999999988 7888999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|++
T Consensus 99 Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 155 (169)
T 2y1l_E 99 LLKNGADVN-ANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISID 155 (169)
T ss_dssp HHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 999999987 688899999999999999999999999999999999999999999986
No 3
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=1.8e-29 Score=150.28 Aligned_cols=125 Identities=20% Similarity=0.180 Sum_probs=118.9
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.+|+ .+++++
T Consensus 12 ~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 87 (167)
T 3v31_A 12 AQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ----LLGKGRESALSLACSKGYTDIVKM 87 (167)
T ss_dssp HTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC----CcCCCCCcHHHHHHHcCCHHHHHH
Confidence 5789999999999998899999999999999999999999999999999988 7888999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|++
T Consensus 88 Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 144 (167)
T 3v31_A 88 LLDCGVDVN-EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVA 144 (167)
T ss_dssp HHHHTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHCCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 999999987 788899999999999999999999999999999999999999999985
No 4
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=2.4e-29 Score=147.99 Aligned_cols=124 Identities=18% Similarity=0.203 Sum_probs=116.3
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++ .+..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .+++++
T Consensus 11 ~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 85 (153)
T 1awc_B 11 RAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD----ARTKVDRTPLHMAASEGHANIVEV 85 (153)
T ss_dssp HHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT----CCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----CCCCCCCCHHHHHHHcChHHHHHH
Confidence 5689999999999998765 58889999999999999999999999999988 7888999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|++.|++++ ..+..|.||+|+|+..|+.+++++|+++|++++..+..|.||||+|++
T Consensus 86 Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 142 (153)
T 1awc_B 86 LLKHGADVN-AKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISID 142 (153)
T ss_dssp HHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 999999987 688899999999999999999999999999999999999999999986
No 5
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=6.3e-30 Score=162.88 Aligned_cols=124 Identities=19% Similarity=0.192 Sum_probs=93.2
Q ss_pred cchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHH
Q 047641 3 NASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEIL 74 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L 74 (132)
.|+.+++++|++.+.+++.++..|.||+|+|+..++.+++++|++.|++++ ..+..|+||| .+++++|
T Consensus 96 ~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n----~~d~~g~TpL~~A~~~g~~~~v~~L 171 (269)
T 4b93_B 96 HGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPN----KKDLSGNTPLIYACSGGHHELVALL 171 (269)
T ss_dssp TTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC----CCCTTCCCHHHHHHHTTCGGGHHHH
T ss_pred cCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCC----CCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 455566666666666666666666666666666666666666666666666 5667777777 6778888
Q ss_pred HhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 75 SRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 75 ~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
++.|++++ ..+..|+||||+|+..|+.+++++|+++|+|++..|..|+||||+|++
T Consensus 172 l~~gadvn-~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 172 LQHGASIN-ASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp HHTTCCTT-CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCT
T ss_pred HHCCCCCC-ccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHh
Confidence 88888877 677888888888888888888888888888888888888888888875
No 6
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=2.6e-29 Score=150.28 Aligned_cols=125 Identities=23% Similarity=0.225 Sum_probs=118.7
Q ss_pred CcchHHHHHHHHhcccC-cccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSICLS-LLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
+.|+.+.++++++.+.. ++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.+|+ .++++
T Consensus 11 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~ 86 (172)
T 3v30_A 11 AQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH----ILAKERESALSLASTGGYTDIVG 86 (172)
T ss_dssp HTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT----CCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch----hhcccCCCHHHHHHHCCCHHHHH
Confidence 57899999999999988 88999999999999999999999999999999988 7888999999 88999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|++.|.+++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|++
T Consensus 87 ~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 144 (172)
T 3v30_A 87 LLLERDVDIN-IYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVA 144 (172)
T ss_dssp HHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 9999999987 688899999999999999999999999999999999999999999985
No 7
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=7.3e-29 Score=149.28 Aligned_cols=125 Identities=23% Similarity=0.212 Sum_probs=117.7
Q ss_pred CcchHHHHHHHHhcccC-cccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSICLS-LLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
+.|+.+++++|++.+.. ++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.||+ .++++
T Consensus 14 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~ 89 (179)
T 3f6q_A 14 REGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN----VMNRGDDTPLHLAASHGHRDIVQ 89 (179)
T ss_dssp HHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC----CcCCCCCCHHHHHHHcCCHHHHH
Confidence 46899999999998665 89999999999999999999999999999999998 7888999999 88999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|++
T Consensus 90 ~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 147 (179)
T 3f6q_A 90 KLLQYKADIN-AVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKA 147 (179)
T ss_dssp HHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCH
T ss_pred HHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHH
Confidence 9999999987 788999999999999999999999999999999999999999999975
No 8
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=3.8e-29 Score=151.94 Aligned_cols=125 Identities=19% Similarity=0.133 Sum_probs=118.3
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.++..|.||||+|+..++.+++++|++.|++++ ..+..|.||+ .+++++
T Consensus 44 ~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 119 (192)
T 2rfm_A 44 MLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN----TKDFSGKTPLMWSIIFGYSEMSYF 119 (192)
T ss_dssp HHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT----CCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCC----CCCCCCCcHHHHHHHcCCHHHHHH
Confidence 4578899999999999999999999999999999999999999999999988 7888999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|++
T Consensus 120 Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 176 (192)
T 2rfm_A 120 LLEHGANVN-DRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARI 176 (192)
T ss_dssp HHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred HHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 999999987 788999999999999999999999999999999999999999999985
No 9
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=8.2e-29 Score=147.19 Aligned_cols=125 Identities=20% Similarity=0.230 Sum_probs=116.4
Q ss_pred CcchHHHHHHHHhcccC-cccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSICLS-LLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
+.|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .++++
T Consensus 17 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~ 92 (165)
T 3twr_A 17 KAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH----AKDKGGLVPLHNACSYGHYEVAE 92 (165)
T ss_dssp HHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC----ccCCCCCCHHHHHHHcCcHHHHH
Confidence 46889999999986554 78888899999999999999999999999999988 7888999999 88999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|++
T Consensus 93 ~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 93 LLVKHGAVVN-VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp HHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT
T ss_pred HHHhCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc
Confidence 9999999987 688899999999999999999999999999999999999999999875
No 10
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=4.8e-29 Score=147.70 Aligned_cols=124 Identities=19% Similarity=0.230 Sum_probs=116.8
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.++..|.||||+|+. |+.+++++|++.|++++ ..+..|.||+ .+++++
T Consensus 14 ~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 88 (162)
T 1ihb_A 14 ARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPD----LKDRTGFAVIHDAARAGFLDTLQT 88 (162)
T ss_dssp HHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCC----CCCCCCCCHHHHHHHcCCHHHHHH
Confidence 4689999999999999999999999999999999 99999999999999988 7888999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCc-cccCCCCCCChhhhhhc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTF-MSHGSPSGKTALHAAAR 131 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~-~~~~~~~g~tpl~~a~~ 131 (132)
|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|++
T Consensus 89 Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~ 146 (162)
T 1ihb_A 89 LLEFQADVN-IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARL 146 (162)
T ss_dssp HHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHH
T ss_pred HHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHH
Confidence 999999987 6888999999999999999999999999998 58999999999999986
No 11
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=2.2e-28 Score=152.24 Aligned_cols=129 Identities=22% Similarity=0.238 Sum_probs=114.9
Q ss_pred CcchHHHHHHHHhc-ccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCC-CCCCCCccchH--------HHHH
Q 047641 2 KNASTKFVKEILSI-CLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGD-KEPNGRVETAI--------IHVV 71 (132)
Q Consensus 2 ~~g~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~~~~~~~l--------~~~~ 71 (132)
+.|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|++.++++...+ ...+..|.||+ .+++
T Consensus 12 ~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 91 (232)
T 2rfa_A 12 KENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLV 91 (232)
T ss_dssp HTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHH
Confidence 57899999999998 77799999999999999999999999999999998863111 14667899999 8899
Q ss_pred HHHHhCCCCCCcccCC-------------CCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 72 EILSRKDPDYPYSANN-------------YGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 72 ~~L~~~~~~~~~~~~~-------------~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
++|++.|++++. .+. .|.||||+|+..|+.+++++|+++|++++..|..|+||||+|++
T Consensus 92 ~~Ll~~g~~~~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~ 163 (232)
T 2rfa_A 92 RALLARGASVSA-RATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILIL 163 (232)
T ss_dssp HHHHHTTCCTTC-CCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT
T ss_pred HHHHhCCCCCCc-ccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 999999998863 333 79999999999999999999999999999999999999999986
No 12
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=6.9e-29 Score=158.10 Aligned_cols=121 Identities=24% Similarity=0.323 Sum_probs=107.9
Q ss_pred HHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCC
Q 047641 7 KFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKD 78 (132)
Q Consensus 7 ~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~ 78 (132)
.+++.|++.|.+++.+|..|.||||+|+..|+.+++++|++.+++++ ..+..|.+|+ .+++++|++.|
T Consensus 67 ~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~----~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 142 (269)
T 4b93_B 67 KRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAG----ARNADQAVPLHLACQQGHFQVVKCLLDSN 142 (269)
T ss_dssp --------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTT----CCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcC----ccCCCCCCccccccccChHHHHHHHHHCC
Confidence 46788999999999999999999999999999999999999999988 7888999999 88999999999
Q ss_pred CCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhcC
Q 047641 79 PDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAARE 132 (132)
Q Consensus 79 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~~ 132 (132)
++++ ..+..|+||||+|+..|+.+++++|+++|++++..+..|+||||+|++.
T Consensus 143 ~~~n-~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~ 195 (269)
T 4b93_B 143 AKPN-KKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195 (269)
T ss_dssp CCSC-CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHT
T ss_pred CCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHc
Confidence 9987 7889999999999999999999999999999999999999999999863
No 13
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=8.6e-28 Score=149.45 Aligned_cols=123 Identities=21% Similarity=0.281 Sum_probs=64.2
Q ss_pred cchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHH
Q 047641 3 NASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEIL 74 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L 74 (132)
.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.+|+ .+++++|
T Consensus 50 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~~~~L 125 (231)
T 3aji_A 50 AGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVN----AVNQNGCTPLHYAASKNRHEIAVML 125 (231)
T ss_dssp HTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCC----CCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 345555555555555555555555555555555555555555555555554 4445555555 4444455
Q ss_pred HhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhh
Q 047641 75 SRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 130 (132)
Q Consensus 75 ~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~ 130 (132)
++.|.+++ ..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+
T Consensus 126 l~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 180 (231)
T 3aji_A 126 LEGGANPD-AKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLAC 180 (231)
T ss_dssp HHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred HHcCCCCC-CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHH
Confidence 54444443 33444444444444444444444444444444444444444444444
No 14
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=9.4e-28 Score=152.06 Aligned_cols=124 Identities=17% Similarity=0.170 Sum_probs=98.9
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .+++++
T Consensus 12 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 87 (261)
T 2xai_A 12 IHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN----GVTADWHTPLFNACVSGSWDCVNL 87 (261)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----CCCCCCCCHHHHHHHcCCHHHHHH
Confidence 4678888888888888888888888888888888888888888888888887 6777888888 677777
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|++.|++++ .+..|.||+|+|+..|+.+++++|+++|++++..+..|+||||+|++
T Consensus 88 Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 143 (261)
T 2xai_A 88 LLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACE 143 (261)
T ss_dssp HHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHH
T ss_pred HHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 887777765 34457777777777777777777777777777777777777777764
No 15
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=5.4e-28 Score=153.99 Aligned_cols=64 Identities=23% Similarity=0.301 Sum_probs=40.7
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 68 IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 68 ~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
.+++++|++.|++++...+..|+||||+|+..|+.+++++|+++|++++..+..|+||||+|++
T Consensus 171 ~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 171 AEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALL 234 (282)
T ss_dssp HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHH
Confidence 5566666666666553222346666776666666666666666666666666666677766664
No 16
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=9.4e-28 Score=151.42 Aligned_cols=124 Identities=20% Similarity=0.253 Sum_probs=65.2
Q ss_pred cchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcc-cccCCCCCCCCCccchH--------------
Q 047641 3 NASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAK-VAQHGDKEPNGRVETAI-------------- 67 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~~~~~~~l-------------- 67 (132)
.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.++ +++ ..+..|.+|+
T Consensus 67 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 142 (253)
T 1yyh_A 67 YSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD----ARMHDGTTPLILAARLAVEGMLED 142 (253)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTT----CCCTTCCCHHHHHHHHTCSSHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc----ccCCCCCcHHHHHHHcChHHHHHH
Confidence 345555555555555555555555555555555555555555555443 333 3334444444
Q ss_pred ---------------------------HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCC
Q 047641 68 ---------------------------IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSP 120 (132)
Q Consensus 68 ---------------------------~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~ 120 (132)
.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 143 Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 221 (253)
T 1yyh_A 143 LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDH 221 (253)
T ss_dssp HHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccc
Confidence 445555555555544 3455555555555555555555555555555555555
Q ss_pred CCCChhhhhhc
Q 047641 121 SGKTALHAAAR 131 (132)
Q Consensus 121 ~g~tpl~~a~~ 131 (132)
.|+||+|+|++
T Consensus 222 ~g~tpl~~A~~ 232 (253)
T 1yyh_A 222 MDRLPRDIAQE 232 (253)
T ss_dssp TCCCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 55555555543
No 17
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=2e-27 Score=147.81 Aligned_cols=125 Identities=21% Similarity=0.223 Sum_probs=118.1
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.++..|.||||+|+..++.+++++|++.|++++ ..+..|.+|+ .+++++
T Consensus 82 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 157 (231)
T 3aji_A 82 SAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD----AKDHYDATAMHRAAAKGNLKMVHI 157 (231)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----CcCCCCCcHHHHHHHcCCHHHHHH
Confidence 4578999999999999999999999999999999999999999999999988 7888999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|++.|.+++ ..+..|.||||+|+..++.+++++|+++|++++..+..|.||+|+|++
T Consensus 158 Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 158 LLFYKASTN-IQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp HHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCH
T ss_pred HHhcCCCcc-ccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHh
Confidence 999999987 688899999999999999999999999999999999999999999974
No 18
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.3e-27 Score=140.75 Aligned_cols=123 Identities=18% Similarity=0.273 Sum_probs=114.6
Q ss_pred CcchHHHHHHHHhccc-CcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSICL-SLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~-~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
+.|+.+++++|++... +++.+|..|.||||+ +..|+.+++++|++.|++++ ..+..|.||+ .++++
T Consensus 11 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~ 85 (156)
T 1bd8_A 11 ARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPN----VQDTSGTSPVHDAARTGFLDTLK 85 (156)
T ss_dssp HHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCC----CcCCCCCCHHHHHHHcCcHHHHH
Confidence 5689999999999832 588999999999999 99999999999999999998 7888999999 88999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|++.|++++ ..+..|.||||+|+..|+.+++++|++. ++++..+..|.||||+|++
T Consensus 86 ~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~ 142 (156)
T 1bd8_A 86 VLVEHGADVN-VPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQ 142 (156)
T ss_dssp HHHHTTCCSC-CCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHH
T ss_pred HHHHcCCCCC-CcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHH
Confidence 9999999987 6888999999999999999999999999 9999999999999999986
No 19
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=1.9e-27 Score=147.51 Aligned_cols=124 Identities=18% Similarity=0.160 Sum_probs=81.9
Q ss_pred cchHHHHHHHHhcc--cCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHH
Q 047641 3 NASTKFVKEILSIC--LSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 3 ~g~~~~~~~ll~~~--~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
.|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.|++++ ..+..|.||+ .++++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~ 157 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVR----IKDKFNQIPLHRAASVGSLKLIE 157 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC----CCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc----ccCCCCCCHHHHHHHcCCHHHHH
Confidence 45566666666665 4466666666666666666666666666666666665 5566666666 66677
Q ss_pred HHHhCC-CCCCcccCCCCCcHHHHHHHcCCHHHHHHHH-hcCCccccCCCCCCChhhhhhc
Q 047641 73 ILSRKD-PDYPYSANNYGKMPLYMAVEKGCLEMVDVLL-STYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 73 ~L~~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~-~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|++.| .+++ ..+..|+||||+|+..|+.+++++|+ +.|++++..|..|+||+|+|++
T Consensus 158 ~Ll~~g~~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 158 LLCGLGKSAVN-WQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp HHHTTTCCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred HHHhcCccccc-CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 777666 5544 55666777777777777777777777 6677777777777777777654
No 20
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=1.1e-27 Score=151.06 Aligned_cols=106 Identities=17% Similarity=0.204 Sum_probs=97.6
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.||+ .+++++
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~----~~~~~g~tpL~~A~~~~~~~~v~~ 208 (253)
T 1yyh_A 133 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD----MQNNREETPLFLAAREGSYETAKV 208 (253)
T ss_dssp HHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----CcCCCCCCHHHHHHHCCCHHHHHH
Confidence 3567789999999999999999999999999999999999999999999998 7889999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTY 112 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g 112 (132)
|++.|++++ ..+..|.||+++|+..|+.+++++|....
T Consensus 209 Ll~~ga~~~-~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 209 LLDHFANRD-ITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp HHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred HHHcCCCcc-ccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 999999987 78999999999999999999999998764
No 21
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=2.9e-27 Score=146.36 Aligned_cols=123 Identities=22% Similarity=0.190 Sum_probs=66.9
Q ss_pred cchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcc-cccCCCCCCCCCccchH--------HHHHHH
Q 047641 3 NASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAK-VAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.++ +++ ..+..|.+|+ .+++++
T Consensus 35 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~----~~~~~g~t~L~~A~~~~~~~~~~~ 110 (223)
T 2f8y_A 35 YSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD----ARMHDGTTPLILAARLAVEGMLED 110 (223)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTT----CCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc----cCCCCCCcHHHHHHHhCcHHHHHH
Confidence 455566666666655555555566666666666666666666665554 333 3444555555 445555
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhh
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 130 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~ 130 (132)
|++.|.+++ ..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+
T Consensus 111 Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 166 (223)
T 2f8y_A 111 LINSHADVN-AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAA 166 (223)
T ss_dssp HHHTTCCTT-CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred HHHcCCCCc-CcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHH
Confidence 555555544 34444555555555555555555555555555555555555555554
No 22
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=2.8e-27 Score=147.66 Aligned_cols=125 Identities=21% Similarity=0.264 Sum_probs=99.0
Q ss_pred CcchHHHHHHHHhcc-cCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSIC-LSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
+.|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.|++++ ..+..|.+|+ .++++
T Consensus 86 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~~~ 161 (237)
T 3b7b_A 86 KKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN----IRDNEENICLHWAAFSGCVDIAE 161 (237)
T ss_dssp HTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHHCCHHHHH
T ss_pred HcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----ccCCCCCCHHHHHHHCCCHHHHH
Confidence 356777777777777 3477777777788888888788888888888777776 6677777877 77888
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|++.|++++ ..+..|.||||+|+..++.+++++|+++|++++..|..|+||||+|++
T Consensus 162 ~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 219 (237)
T 3b7b_A 162 ILLAAKCDLH-AVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASL 219 (237)
T ss_dssp HHHTTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCT
T ss_pred HHHHcCCCCC-CcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 8888888876 567788888888888888888888888888888888888888888875
No 23
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=2e-27 Score=152.72 Aligned_cols=61 Identities=25% Similarity=0.243 Sum_probs=31.6
Q ss_pred HHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhh
Q 047641 69 HVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 130 (132)
Q Consensus 69 ~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~ 130 (132)
+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+
T Consensus 213 ~~v~~Ll~~g~d~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 213 EVLKLLIQARYDVN-IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp HHHHHHHTTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCC
T ss_pred HHHHHHHHcCCCCC-CcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 34445555554444 34445555555555555555555555555555555555555555554
No 24
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=3e-27 Score=151.87 Aligned_cols=126 Identities=21% Similarity=0.227 Sum_probs=106.7
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.||+ .+++++
T Consensus 49 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----~~~~~g~tpL~~A~~~g~~~~v~~ 124 (299)
T 1s70_B 49 SSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANIN----QPDNEGWIPLHAAASCGYLDIAEY 124 (299)
T ss_dssp HHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----CCCCCCCcHHHHHHHcCCHHHHHH
Confidence 4578888888888888888888888888888888888888888888888877 6777888888 778888
Q ss_pred HHhCCCCCCcc-----------------------------------------------------------cCCCCCcHHH
Q 047641 74 LSRKDPDYPYS-----------------------------------------------------------ANNYGKMPLY 94 (132)
Q Consensus 74 L~~~~~~~~~~-----------------------------------------------------------~~~~~~t~l~ 94 (132)
|++.|++++.. .+..|.||||
T Consensus 125 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~ 204 (299)
T 1s70_B 125 LISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALH 204 (299)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHH
T ss_pred HHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHH
Confidence 88877765411 2346889999
Q ss_pred HHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 95 MAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 95 ~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|+..|+.+++++|++.|++++..|..|+||||+|++
T Consensus 205 ~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~ 241 (299)
T 1s70_B 205 VAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAH 241 (299)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHh
Confidence 9999999999999999999999999999999999986
No 25
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=1.2e-27 Score=149.35 Aligned_cols=129 Identities=19% Similarity=0.197 Sum_probs=115.2
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCC--CCCCCCccchH--------HHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGD--KEPNGRVETAI--------IHVV 71 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~--~~~~~~~~~~l--------~~~~ 71 (132)
+.|+.+++++|++.|.+++.+|..|.||||+|+..|+.+++++|++.++++.... ...+..|.+|+ .+++
T Consensus 54 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 133 (236)
T 1ikn_D 54 ITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIV 133 (236)
T ss_dssp HTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHH
Confidence 4688999999999999999999999999999999999999999999987632111 14677899999 8899
Q ss_pred HHHHhCCCCCCcccCC-CCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 72 EILSRKDPDYPYSANN-YGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 72 ~~L~~~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
++|++.|++++ ..+. .|.||||+|+..|+.+++++|+++|++++..+..|+||||+|++
T Consensus 134 ~~Ll~~g~~~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 193 (236)
T 1ikn_D 134 ELLVSLGADVN-AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWG 193 (236)
T ss_dssp HHHHHHTCCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTT
T ss_pred HHHHHcCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHc
Confidence 99999999988 4555 89999999999999999999999999999999999999999986
No 26
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=7.2e-27 Score=144.57 Aligned_cols=126 Identities=16% Similarity=0.219 Sum_probs=118.1
Q ss_pred CcchHHHHHHHHhccc-CcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSICL-SLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~-~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
+.|+.+++++|++.+. .++.++..|.||||+|+..++.+++++|++.+++++ ..+..|.||+ .++++
T Consensus 67 ~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~ 142 (223)
T 2f8y_A 67 SADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN----AVDDLGKSALHWAAAVNNVDAAV 142 (223)
T ss_dssp HTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT----CBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc----CcCCCCCcHHHHHHHcCCHHHHH
Confidence 4688999999999988 588999999999999999999999999999999988 7788899999 88999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhcC
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAARE 132 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~~ 132 (132)
+|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||+|+|+++
T Consensus 143 ~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 201 (223)
T 2f8y_A 143 VLLKNGANKD-MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQER 201 (223)
T ss_dssp HHHHTTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHcCCCCC-CcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHh
Confidence 9999999987 6888999999999999999999999999999999999999999999863
No 27
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=5.2e-27 Score=150.41 Aligned_cols=124 Identities=17% Similarity=0.170 Sum_probs=95.1
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.||+ .+++++
T Consensus 68 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 143 (285)
T 3d9h_A 68 IHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN----GVTADWHTPLFNACVSGSWDCVNL 143 (285)
T ss_dssp HTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSS----CCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC----CCCCCCCCHHHHHHHcCHHHHHHH
Confidence 4677888888888888888888888888888888888888888888888877 6777788888 667777
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|++.|.+++ .+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|++
T Consensus 144 Ll~~g~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 199 (285)
T 3d9h_A 144 LLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACE 199 (285)
T ss_dssp HHHTTCCSS--CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHH
T ss_pred HHHCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 777776664 23347777777777777777777777777777777777777777764
No 28
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=3.7e-27 Score=140.85 Aligned_cols=111 Identities=27% Similarity=0.384 Sum_probs=100.4
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
..++.+++++|++.+.+++.+|..|.||||+|++.|+.+++++|++.|++++ .++..|+||+ .+++++
T Consensus 46 ~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn----~~d~~G~TpLh~A~~~g~~~~v~~ 121 (169)
T 4gpm_A 46 ENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN----AKDSDGRTPLHHAAENGHKEVVKL 121 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCC----CCCCCCCCHHHHHHHcCCHHHHHH
Confidence 4678899999999999999999999999999999999999999999999999 8899999999 899999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCcccc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSH 117 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~ 117 (132)
|++.|++++ ..+..|+||||+|+..|+.+++++|+++|++++.
T Consensus 122 Ll~~gad~~-~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 122 LISKGADVN-TSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred HHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 999999988 7899999999999999999999999999999874
No 29
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=3.9e-27 Score=150.04 Aligned_cols=125 Identities=24% Similarity=0.243 Sum_probs=113.8
Q ss_pred CcchHHHHHHHHhcccC---cccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHH
Q 047641 2 KNASTKFVKEILSICLS---LLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHV 70 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~ 70 (132)
+.|+.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .++
T Consensus 18 ~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----~~~~~g~tpL~~A~~~~~~~~ 93 (282)
T 1oy3_D 18 IHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL----VAERGGHTALHLACRVRAHTC 93 (282)
T ss_dssp HTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS----CCCTTSCCHHHHHTTTTCHHH
T ss_pred HcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----CCCCCCCCHHHHHHHcCCcch
Confidence 57899999999999887 78899999999999999999999999999999998 7888999999 889
Q ss_pred HHHHHhCCCC-----------------------------------------------CCcccCCCCCcHHHHHHHcCCHH
Q 047641 71 VEILSRKDPD-----------------------------------------------YPYSANNYGKMPLYMAVEKGCLE 103 (132)
Q Consensus 71 ~~~L~~~~~~-----------------------------------------------~~~~~~~~~~t~l~~a~~~~~~~ 103 (132)
+++|+..++. ++ ..+..|.||||+|+..|+.+
T Consensus 94 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~t~L~~A~~~g~~~ 172 (282)
T 1oy3_D 94 ACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE-AENYDGHTPLHVAVIHKDAE 172 (282)
T ss_dssp HHHHSSSCCSSCCCC-----------------------------------CCCGGGGTT-CCCTTSCCHHHHHHHTTCHH
T ss_pred hHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCC-CcCCCCcCHHHHHHHcCCHH
Confidence 9999987755 22 45678999999999999999
Q ss_pred HHHHHHhcCCccccCCCC-CCChhhhhhc
Q 047641 104 MVDVLLSTYTFMSHGSPS-GKTALHAAAR 131 (132)
Q Consensus 104 ~~~~l~~~g~~~~~~~~~-g~tpl~~a~~ 131 (132)
++++|++.|++++..+.. |+||||+|++
T Consensus 173 ~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~ 201 (282)
T 1oy3_D 173 MVRLLRDAGADLNKPEPTCGRTPLHLAVE 201 (282)
T ss_dssp HHHHHHHHTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCcCHHHHHHH
Confidence 999999999999998854 9999999986
No 30
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=4.5e-27 Score=143.46 Aligned_cols=123 Identities=29% Similarity=0.341 Sum_probs=58.7
Q ss_pred cchHHHHHHHHhccc-CcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 3 NASTKFVKEILSICL-SLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~-~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
.|+.+.++.+++.+. +++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.+|+ .+++++
T Consensus 15 ~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~l~~A~~~~~~~~~~~ 90 (201)
T 3hra_A 15 QRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADIN----LQNSISDSPYLYAGAQGRTEILAY 90 (201)
T ss_dssp TTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred hccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----CCCCCCCCHHHHHHHcCCHHHHHH
Confidence 445555555555554 355555555555555555555555555555555554 4444555555 344444
Q ss_pred HH-hCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC-CccccCCCCCCChhhhhh
Q 047641 74 LS-RKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTY-TFMSHGSPSGKTALHAAA 130 (132)
Q Consensus 74 L~-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g-~~~~~~~~~g~tpl~~a~ 130 (132)
|+ ..+.+++ ..+..|.||||+|+..|+.+++++|++.| ++++..+..|+||||+|+
T Consensus 91 Ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~ 148 (201)
T 3hra_A 91 MLKHATPDLN-KHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAV 148 (201)
T ss_dssp HHHHSCCCTT-CCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHH
T ss_pred HHhccCcccc-cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHH
Confidence 44 2222322 33334444444444444444444444444 444444444444444443
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=7.6e-27 Score=144.84 Aligned_cols=124 Identities=19% Similarity=0.236 Sum_probs=75.5
Q ss_pred cchHHHHHHHHhcc--cCccc-ccCCCCcHHHHHHHhCcHHHHHHHHHhc--ccccCCCCCCCCCccchH--------HH
Q 047641 3 NASTKFVKEILSIC--LSLLQ-VNAEGDTPLHAAVEFCLSNVVRVHIKRA--KVAQHGDKEPNGRVETAI--------IH 69 (132)
Q Consensus 3 ~g~~~~~~~ll~~~--~~~~~-~~~~g~t~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~~~~~~l--------~~ 69 (132)
.|+.+++++|++.+ .+++. .+..|.||||+|+..|+.+++++|++.| ++++ ..+..|.+|+ .+
T Consensus 46 ~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~----~~~~~g~t~L~~A~~~~~~~ 121 (228)
T 2dzn_A 46 FQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLN----KITNQGVTCLHLAVGKKWFE 121 (228)
T ss_dssp TTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTT----CCCTTCCCHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc----cCCcCCCCHHHHHHHcCCHh
Confidence 45555666666655 22333 4555666666666666666666666655 4444 4455566666 55
Q ss_pred HHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC-CccccCCCCCCChhhhhhc
Q 047641 70 VVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTY-TFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 70 ~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g-~~~~~~~~~g~tpl~~a~~ 131 (132)
++++|++.|.+++ ..+..|.||||+|+..|+.+++++|++.| ++++..+..|+||||+|++
T Consensus 122 ~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~ 183 (228)
T 2dzn_A 122 VSQFLIENGASVR-IKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 183 (228)
T ss_dssp HHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHH
Confidence 6666666666655 45566666666666666666666666666 6666666666666666654
No 32
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=7.8e-27 Score=142.39 Aligned_cols=125 Identities=21% Similarity=0.205 Sum_probs=115.0
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHH-hcccccCCCCCCCCCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIK-RAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
+.|+.+++++|++.+.+++.++..|.||||+|+..|+.+++++|++ .+.+++ ..+..|.+|+ .++++
T Consensus 48 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~----~~~~~g~t~L~~A~~~~~~~~v~ 123 (201)
T 3hra_A 48 HNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLN----KHNRYGGNALIPAAEKGHIDNVK 123 (201)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT----CCCTTSCCSHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccc----cccCCCCcHHHHHHHcCCHHHHH
Confidence 4688999999999999999999999999999999999999999995 555777 6888899999 88999
Q ss_pred HHHhCC-CCCCcccCCCCCcHHHHHHHcCC-----HHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 73 ILSRKD-PDYPYSANNYGKMPLYMAVEKGC-----LEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 73 ~L~~~~-~~~~~~~~~~~~t~l~~a~~~~~-----~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|++.| .+++ ..+..|.||||+|+..+. .+++++|++.|++++..+..|+||||+|++
T Consensus 124 ~Ll~~g~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 187 (201)
T 3hra_A 124 LLLEDGREDID-FQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQ 187 (201)
T ss_dssp HHHHHCCCCTT-CCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHcCCCCcC-CCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Confidence 999998 6666 788899999999999998 999999999999999999999999999985
No 33
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=9.5e-27 Score=145.38 Aligned_cols=122 Identities=20% Similarity=0.223 Sum_probs=58.0
Q ss_pred chHHHHHHHHhccc----CcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCC-CCccchH--------HHH
Q 047641 4 ASTKFVKEILSICL----SLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPN-GRVETAI--------IHV 70 (132)
Q Consensus 4 g~~~~~~~ll~~~~----~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~~~l--------~~~ 70 (132)
|+.+++++|++.+. +++.++..|.||||+|+..++.+++++|++.|++++ ..+ ..|.+|+ .++
T Consensus 90 ~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~~~~~g~t~L~~A~~~~~~~~ 165 (241)
T 1k1a_A 90 RSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADID----AVDIKSGRSPLIHAVENNSLSM 165 (241)
T ss_dssp TCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTTCCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc----cccccCCCcHHHHHHHcCCHHH
Confidence 33444444444433 233334444444444444444444444444444433 222 3344444 445
Q ss_pred HHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhh
Q 047641 71 VEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 130 (132)
Q Consensus 71 ~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~ 130 (132)
+++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+
T Consensus 166 v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~ 224 (241)
T 1k1a_A 166 VQLLLQHGANVN-AQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVAR 224 (241)
T ss_dssp HHHHHHTTCCTT-CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCS
T ss_pred HHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHH
Confidence 555555555544 34445555555555555555555555555555555555555555554
No 34
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=1e-26 Score=144.68 Aligned_cols=129 Identities=19% Similarity=0.115 Sum_probs=113.0
Q ss_pred CcchHHHHHHHHhcccCc-----ccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCC---------CCCCccchH
Q 047641 2 KNASTKFVKEILSICLSL-----LQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKE---------PNGRVETAI 67 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~-----~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~---------~~~~~~~~l 67 (132)
+.|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++.|++++..+.. .+..|.||+
T Consensus 46 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L 125 (232)
T 2rfa_A 46 LYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPL 125 (232)
T ss_dssp HTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHH
T ss_pred HcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHH
Confidence 468999999999999875 567779999999999999999999999999988721110 123799999
Q ss_pred --------HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHH----HHHHhcCCcc------ccCCCCCCChhhhh
Q 047641 68 --------IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMV----DVLLSTYTFM------SHGSPSGKTALHAA 129 (132)
Q Consensus 68 --------~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~----~~l~~~g~~~------~~~~~~g~tpl~~a 129 (132)
.+++++|++.|++++ ..+..|+||||+|+..++.+++ ++|++.|++. +..+..|+||||+|
T Consensus 126 ~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A 204 (232)
T 2rfa_A 126 SFAACVGSEEIVRLLIEHGADIR-AQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLA 204 (232)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHH
Confidence 889999999999988 7899999999999999999988 9999999988 58899999999999
Q ss_pred hc
Q 047641 130 AR 131 (132)
Q Consensus 130 ~~ 131 (132)
++
T Consensus 205 ~~ 206 (232)
T 2rfa_A 205 GV 206 (232)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 35
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=7.4e-27 Score=147.95 Aligned_cols=127 Identities=17% Similarity=0.125 Sum_probs=76.4
Q ss_pred cchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCC-------------------------
Q 047641 3 NASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDK------------------------- 57 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~------------------------- 57 (132)
.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 46 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 125 (261)
T 2xai_A 46 GGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGG 125 (261)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 4556666666666666666666666666666666666666666666655440000
Q ss_pred ---CCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChh
Q 047641 58 ---EPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTAL 126 (132)
Q Consensus 58 ---~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl 126 (132)
..+..|.||+ .+++++|++.|++++ .+..|.||||+|+..++.+++++|+++|++++..|..|+||+
T Consensus 126 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl 203 (261)
T 2xai_A 126 NIDHKISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPV 203 (261)
T ss_dssp CTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT--CCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGG
T ss_pred CCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC--CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChh
Confidence 2334444444 556666666666554 255666666666666666666666666666666666666666
Q ss_pred hhhhc
Q 047641 127 HAAAR 131 (132)
Q Consensus 127 ~~a~~ 131 (132)
|+|++
T Consensus 204 ~~A~~ 208 (261)
T 2xai_A 204 ELVPP 208 (261)
T ss_dssp GGSCT
T ss_pred hhccc
Confidence 66653
No 36
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=1.4e-26 Score=133.83 Aligned_cols=106 Identities=20% Similarity=0.145 Sum_probs=100.2
Q ss_pred cccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCCcH
Q 047641 21 QVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGKMP 92 (132)
Q Consensus 21 ~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t~ 92 (132)
.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .+++++|++.|.+++ ..+..|.||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~ 79 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPN----VKDHAGWTPLHEACNHGHLKVVELLLQHKALVN-TTGYQNDSP 79 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCGGGCCH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc-CcCCCCCCH
Confidence 678899999999999999999999999999988 7888999999 889999999999987 688899999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 93 LYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 93 l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
||+|+..|+.+++++|+++|++++..+..|.||+|+|+.
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 118 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDD 118 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhh
Confidence 999999999999999999999999999999999999975
No 37
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=1.9e-26 Score=144.06 Aligned_cols=125 Identities=26% Similarity=0.294 Sum_probs=93.7
Q ss_pred cchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcc----cccCCCCCCCCCccchH--------HHH
Q 047641 3 NASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAK----VAQHGDKEPNGRVETAI--------IHV 70 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~----~~~~~~~~~~~~~~~~l--------~~~ 70 (132)
.|+.+++++|++.+.+++.++..|.||||+|+..++.+++++|++.++ +++ ..+..|.+|+ .++
T Consensus 56 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~----~~~~~g~t~L~~A~~~~~~~~ 131 (241)
T 1k1a_A 56 TTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE----ARNYDGLTALHVAVNTECQET 131 (241)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTT----CCCTTSCCHHHHHHHHTCHHH
T ss_pred cCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc----ccCcCCCcHHHHHHHcCCHHH
Confidence 456667777777666666666667777777777777777777777665 333 4566677777 778
Q ss_pred HHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 71 VEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 71 ~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+++|++.|.+++......|.||||+|+..|+.+++++|++.|++++..+..|+||||+|++
T Consensus 132 ~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 192 (241)
T 1k1a_A 132 VQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASG 192 (241)
T ss_dssp HHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred HHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 8888888888773333678888888888888888888888888888888888888888875
No 38
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=1.7e-26 Score=144.06 Aligned_cols=124 Identities=21% Similarity=0.297 Sum_probs=70.4
Q ss_pred cchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH---------------
Q 047641 3 NASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------------- 67 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------------- 67 (132)
.|+.+++++|++.+.+++.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.+|+
T Consensus 21 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~~~~L 96 (237)
T 3b7b_A 21 AGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVD----PKDAEGSTCLHLAAKKGHYEVVQYL 96 (237)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCC----CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC----CCCCCCCcHHHHHHHcCCHHHHHHH
Confidence 455555566555555555555555566666665555555555555555554 3444455554
Q ss_pred ---------------------------HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCC
Q 047641 68 ---------------------------IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSP 120 (132)
Q Consensus 68 ---------------------------~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~ 120 (132)
.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 97 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 175 (237)
T 3b7b_A 97 LSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN-IRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNI 175 (237)
T ss_dssp HTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCT
T ss_pred HhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC
Confidence 445555555555544 4455555666666666666666666666666555555
Q ss_pred CCCChhhhhhc
Q 047641 121 SGKTALHAAAR 131 (132)
Q Consensus 121 ~g~tpl~~a~~ 131 (132)
.|.||||+|++
T Consensus 176 ~g~t~L~~A~~ 186 (237)
T 3b7b_A 176 HGDSPLHIAAR 186 (237)
T ss_dssp TCCCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 56666665553
No 39
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=1.1e-26 Score=156.24 Aligned_cols=125 Identities=26% Similarity=0.269 Sum_probs=104.8
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.++..|.||||+|++.|+.+++++|++.|++++ ..+..|+||+ .+++++
T Consensus 254 ~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~~~~g~t~L~~A~~~g~~~~v~~ 329 (437)
T 1n11_A 254 QEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD----ATTRMGYTPLHVASHYGNIKLVKF 329 (437)
T ss_dssp HTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT----CCCSSCCCHHHHHHHSSCSHHHHH
T ss_pred HCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCC----CCCCCCCCHHHHHHHcCcHHHHHH
Confidence 3577788888888887777788888888888888888888888888888777 6777888888 778888
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|++.|++++ ..+..|+||||+|+..|+.+++++|++.|++++..+..|+|||++|++
T Consensus 330 Ll~~gad~n-~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~ 386 (437)
T 1n11_A 330 LLQHQADVN-AKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKR 386 (437)
T ss_dssp HHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHH
T ss_pred HHhcCCCCC-CCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHH
Confidence 888888877 678888899999999999999999999899988888889999988875
No 40
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=3.6e-27 Score=148.82 Aligned_cols=125 Identities=21% Similarity=0.187 Sum_probs=111.9
Q ss_pred cchHHHHHHHHhcccCccc-----------ccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCC---------
Q 047641 3 NASTKFVKEILSICLSLLQ-----------VNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGR--------- 62 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~-----------~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~--------- 62 (132)
.|+.+++++|++.+.+++. +|..|.||||+|+..|+.+++++|++.|++++ ..+..
T Consensus 56 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----~~~~~~~~~~~~~~ 131 (256)
T 2etb_A 56 DGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH----LRACGRFFQKHQGT 131 (256)
T ss_dssp TTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCCSGGGSCCSSS
T ss_pred cchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC----cccccccccccccc
Confidence 4899999999999887543 34679999999999999999999999999988 55544
Q ss_pred ----ccchH--------HHHHHHHHh---CCCCCCcccCCCCCcHHHHHHH--cCCHH-------HHHHHHhcCCcc---
Q 047641 63 ----VETAI--------IHVVEILSR---KDPDYPYSANNYGKMPLYMAVE--KGCLE-------MVDVLLSTYTFM--- 115 (132)
Q Consensus 63 ----~~~~l--------~~~~~~L~~---~~~~~~~~~~~~~~t~l~~a~~--~~~~~-------~~~~l~~~g~~~--- 115 (132)
|.||+ .+++++|++ .|++++ ..+..|+||||+|+. .++.+ ++++|++.|+++
T Consensus 132 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n-~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~ 210 (256)
T 2etb_A 132 CFYFGELPLSLAACTKQWDVVTYLLENPHQPASLE-ATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPT 210 (256)
T ss_dssp CCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcC-ccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccc
Confidence 99999 899999999 899988 788999999999999 78888 999999999999
Q ss_pred ----ccCCCCCCChhhhhhcC
Q 047641 116 ----SHGSPSGKTALHAAARE 132 (132)
Q Consensus 116 ----~~~~~~g~tpl~~a~~~ 132 (132)
+..|..|+||||+|++.
T Consensus 211 ~~~~~~~d~~g~tpL~~A~~~ 231 (256)
T 2etb_A 211 VQLEEISNHQGLTPLKLAAKE 231 (256)
T ss_dssp CCGGGCCCTTSCCHHHHHHHT
T ss_pred cccccccCCCCCCHHHHHHHh
Confidence 89999999999999863
No 41
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=1.5e-26 Score=133.62 Aligned_cols=110 Identities=17% Similarity=0.129 Sum_probs=102.2
Q ss_pred cCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH-------HHHHHHHHhCCCCCCcccCCC-
Q 047641 17 LSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI-------IHVVEILSRKDPDYPYSANNY- 88 (132)
Q Consensus 17 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l-------~~~~~~L~~~~~~~~~~~~~~- 88 (132)
.+++.++..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .+++++|++.|++++ ..+..
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~-~~~~~~ 77 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPN----ALNRFGRRPIQVMMMGSAQVAELLLLHGAEPN-CADPAT 77 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTCCTTTTTSTTSCHHHHHHHHHHTCCSS-CCBTTT
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcC----CcCCCCCCHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCC
Confidence 4578899999999999999999999999999999988 7788899998 789999999999987 67777
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 89 GKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 89 ~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|.||||+|+..|+.+++++|+++|++++..+..|+||||+|++
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 120 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE 120 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999985
No 42
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=5.1e-27 Score=148.33 Aligned_cols=126 Identities=21% Similarity=0.237 Sum_probs=112.3
Q ss_pred CcchHHHHHHHHhcccC-----------cccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCC----------
Q 047641 2 KNASTKFVKEILSICLS-----------LLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPN---------- 60 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~-----------~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~---------- 60 (132)
+.|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.|++++ ..+
T Consensus 58 ~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----~~~~~~~~~~~~~ 133 (260)
T 3jxi_A 58 SAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH----AQARGRFFQPKDE 133 (260)
T ss_dssp BTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCEECCCSSSCC
T ss_pred hcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC----ccccccccCcccc
Confidence 67999999999998753 34455589999999999999999999999999988 555
Q ss_pred ----CCccchH--------HHHHHHHHh---CCCCCCcccCCCCCcHHHHHHHcCC---------HHHHHHHHhcCCcc-
Q 047641 61 ----GRVETAI--------IHVVEILSR---KDPDYPYSANNYGKMPLYMAVEKGC---------LEMVDVLLSTYTFM- 115 (132)
Q Consensus 61 ----~~~~~~l--------~~~~~~L~~---~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~l~~~g~~~- 115 (132)
..|.||+ .+++++|++ .|++++ ..+..|+||||+|+..++ .+++++|++.|+++
T Consensus 134 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~-~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 134 GGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR-RQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp CCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc-ccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 5799999 899999999 899987 789999999999998887 79999999999998
Q ss_pred ------ccCCCCCCChhhhhhcC
Q 047641 116 ------SHGSPSGKTALHAAARE 132 (132)
Q Consensus 116 ------~~~~~~g~tpl~~a~~~ 132 (132)
+..+..|+||||+|++.
T Consensus 213 ~~~~~~~~~d~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 213 PDTNLEALLNNDGLSPLMMAAKT 235 (260)
T ss_dssp TTCCGGGCCCTTSCCHHHHHHHT
T ss_pred cccchhhcccCCCCCHHHHHHHc
Confidence 67999999999999863
No 43
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.94 E-value=2.1e-27 Score=154.89 Aligned_cols=126 Identities=17% Similarity=0.071 Sum_probs=94.9
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCc---HHHHHHHHHhc-ccccCCCCCCCCCccchH----------
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCL---SNVVRVHIKRA-KVAQHGDKEPNGRVETAI---------- 67 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~---~~~~~~ll~~~-~~~~~~~~~~~~~~~~~l---------- 67 (132)
+.|+.+++++|++.|.+++.+|..|.||||+|+..|+ .++++.|++.+ ++++ ..+..|+||+
T Consensus 140 ~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~----~~d~~g~tpLh~A~~~~~~~ 215 (327)
T 1sw6_A 140 SIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI----LEDSMNRTILHHIIITSGMT 215 (327)
T ss_dssp HTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG----EECTTCCCHHHHHHHHHTST
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc----CCCCCCCCHHHHHHHHcccc
Confidence 3566777777777777777777777777777777766 45566666654 4455 5666777777
Q ss_pred --HHHHHHHHhCCC---------------------------------------------CCCcccCCCCCcHHHHHHHcC
Q 047641 68 --IHVVEILSRKDP---------------------------------------------DYPYSANNYGKMPLYMAVEKG 100 (132)
Q Consensus 68 --~~~~~~L~~~~~---------------------------------------------~~~~~~~~~~~t~l~~a~~~~ 100 (132)
.+++++|++.+. +++ ..+..|+||||+|+..|
T Consensus 216 g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n-~~d~~G~TpLh~A~~~g 294 (327)
T 1sw6_A 216 GCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN-AQDSNGDTCLNIAARLG 294 (327)
T ss_dssp TCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTT-CCCTTSCCHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCC-CCCCCCCCHHHHHHHcC
Confidence 245666665421 233 57789999999999999
Q ss_pred CHHHHHHHHhcCCccccCCCCCCChhhhhhcC
Q 047641 101 CLEMVDVLLSTYTFMSHGSPSGKTALHAAARE 132 (132)
Q Consensus 101 ~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~~ 132 (132)
+.+++++|+++|++++..|..|+||||+|+++
T Consensus 295 ~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 295 NISIVDALLDYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred CHHHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence 99999999999999999999999999999874
No 44
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=8.2e-27 Score=148.96 Aligned_cols=124 Identities=22% Similarity=0.243 Sum_probs=88.4
Q ss_pred cchHHHHHHHHhccc-CcccccCCCCcHHHHHH-----HhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------H
Q 047641 3 NASTKFVKEILSICL-SLLQVNAEGDTPLHAAV-----EFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------I 68 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~-~~~~~~~~g~t~l~~a~-----~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~ 68 (132)
.|+.+++++|++.+. +++.++..|.||||+|+ ..++.+++++|++.|.+.+ ..+..|+||+ .
T Consensus 121 ~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~----~~~~~g~tpLh~A~~~g~~ 196 (276)
T 4hbd_A 121 HANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINA----KASQAGQTALMLAVSHGRV 196 (276)
T ss_dssp TTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTC----CCTTTCCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcc----ccCCCCCCHHHHHHHcCCH
Confidence 455566666666665 45556666666666665 4455556666666655444 4556677777 7
Q ss_pred HHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHh-cCCccccCCCCCCChhhhhhc
Q 047641 69 HVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLS-TYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 69 ~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~-~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+++++|++.|++++ ..+..|+||||+|+..|+.+++++|++ .|++++..|..|+||||+|++
T Consensus 197 ~~v~~Ll~~gad~n-~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~ 259 (276)
T 4hbd_A 197 DVVKALLACEADVN-VQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALD 259 (276)
T ss_dssp HHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHhCCCCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH
Confidence 78888888888876 677788888888888888888888888 788888888888888888875
No 45
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=7.4e-27 Score=149.74 Aligned_cols=125 Identities=18% Similarity=0.121 Sum_probs=114.0
Q ss_pred CCcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCc-cchH--------HHHH
Q 047641 1 TKNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRV-ETAI--------IHVV 71 (132)
Q Consensus 1 a~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~-~~~l--------~~~~ 71 (132)
++.|+.+++++|++.|.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..| .||+ .+++
T Consensus 70 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----~~~~~g~~t~L~~A~~~~~~~~v 145 (285)
T 3kea_A 70 ATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM----FYGKTGWKTSFYHAVMLNDVSIV 145 (285)
T ss_dssp TTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG----GCSSSGGGSHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC----ccCCCCCCCHHHHHHHcCCHHHH
Confidence 46789999999999999999999999999999999999999999999999998 788888 7999 8899
Q ss_pred HHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCCh-hhhhhc
Q 047641 72 EILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTA-LHAAAR 131 (132)
Q Consensus 72 ~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tp-l~~a~~ 131 (132)
++|++.|++.. ....|.||||+|+..|+.+++++|+++|++++..+..|+|| ||+|++
T Consensus 146 ~~Ll~~g~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~ 204 (285)
T 3kea_A 146 SYFLSEIPSTF--DLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAID 204 (285)
T ss_dssp HHHHTTSCTTC--CCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHH
T ss_pred HHHHhCCCccc--cccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHH
Confidence 99999998763 22378999999999999999999999999999999999998 999985
No 46
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=6.3e-27 Score=154.21 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=113.4
Q ss_pred CcchHHHHHHHHhc----ccCccc-----------------ccCCCCcHHHHHHHhC--cHHHHHHHHHhcccccCCCCC
Q 047641 2 KNASTKFVKEILSI----CLSLLQ-----------------VNAEGDTPLHAAVEFC--LSNVVRVHIKRAKVAQHGDKE 58 (132)
Q Consensus 2 ~~g~~~~~~~ll~~----~~~~~~-----------------~~~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~ 58 (132)
+.|+.+++++|++. +.+++. +|..|.||||+|+..| +.+++++|++.|++++ .
T Consensus 93 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~----~ 168 (364)
T 3ljn_A 93 MANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT----A 168 (364)
T ss_dssp HTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT----C
T ss_pred HcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc----c
Confidence 35778888888887 555555 8889999999999999 9999999999999998 7
Q ss_pred CCCCccchH--------HHHHHHHHhCCCC-----CCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCCh
Q 047641 59 PNGRVETAI--------IHVVEILSRKDPD-----YPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTA 125 (132)
Q Consensus 59 ~~~~~~~~l--------~~~~~~L~~~~~~-----~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tp 125 (132)
.+..|+||+ .+++++|++.|++ ++ ..+..|+||||+|+..|+.+++++|+++|++++..|..|+||
T Consensus 169 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tp 247 (364)
T 3ljn_A 169 KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLD-YANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVP 247 (364)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTT-CCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccc-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 889999999 8999999999888 66 678899999999999999999999999999999999999999
Q ss_pred hhhhhc
Q 047641 126 LHAAAR 131 (132)
Q Consensus 126 l~~a~~ 131 (132)
||+|++
T Consensus 248 L~~A~~ 253 (364)
T 3ljn_A 248 LYLSVR 253 (364)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 47
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=8.7e-27 Score=147.06 Aligned_cols=129 Identities=18% Similarity=0.167 Sum_probs=110.6
Q ss_pred CcchHH----HHHHHHhcccCccc----ccCCCCcHHHHHHHh---CcHHHHHHHHHhcccccCCC-------CCCCCCc
Q 047641 2 KNASTK----FVKEILSICLSLLQ----VNAEGDTPLHAAVEF---CLSNVVRVHIKRAKVAQHGD-------KEPNGRV 63 (132)
Q Consensus 2 ~~g~~~----~~~~ll~~~~~~~~----~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~-------~~~~~~~ 63 (132)
+.|+.+ +++++++.+.+++. +|..|.||||+|+.. |+.+++++|++.|++++..+ ...+..|
T Consensus 11 ~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g 90 (256)
T 2etb_A 11 SRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQG 90 (256)
T ss_dssp HHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTT
T ss_pred HcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccC
Confidence 346665 56777778988887 899999999999999 99999999999998776211 0133679
Q ss_pred cchH--------HHHHHHHHhCCCCCCcccCCC-------------CCcHHHHHHHcCCHHHHHHHHh---cCCccccCC
Q 047641 64 ETAI--------IHVVEILSRKDPDYPYSANNY-------------GKMPLYMAVEKGCLEMVDVLLS---TYTFMSHGS 119 (132)
Q Consensus 64 ~~~l--------~~~~~~L~~~~~~~~~~~~~~-------------~~t~l~~a~~~~~~~~~~~l~~---~g~~~~~~~ 119 (132)
.||+ .+++++|++.|++++ ..+.. |.||||+|+..|+.+++++|++ .|++++..|
T Consensus 91 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d 169 (256)
T 2etb_A 91 HSALHIAIEKRSLQCVKLLVENGADVH-LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATD 169 (256)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCC-cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccC
Confidence 9999 899999999999987 44543 9999999999999999999999 999999999
Q ss_pred CCCCChhhhhhc
Q 047641 120 PSGKTALHAAAR 131 (132)
Q Consensus 120 ~~g~tpl~~a~~ 131 (132)
..|+||||+|++
T Consensus 170 ~~g~TpLh~A~~ 181 (256)
T 2etb_A 170 SLGNTVLHALVM 181 (256)
T ss_dssp TTSCCHHHHHHH
T ss_pred CCCCCHHHHHHH
Confidence 999999999985
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=1.2e-26 Score=147.73 Aligned_cols=126 Identities=20% Similarity=0.208 Sum_probs=111.4
Q ss_pred CcchHHHHHHHHhcccCc-----------ccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCC---------
Q 047641 2 KNASTKFVKEILSICLSL-----------LQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNG--------- 61 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~-----------~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~--------- 61 (132)
+.|+.+++++|++.+.++ ..+|..|.||||+|+..|+.+++++|++.|++++ ..+.
T Consensus 66 ~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~----~~~~~~~~~~~~~ 141 (273)
T 2pnn_A 66 HNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ----AAANGDFFKKTKG 141 (273)
T ss_dssp BTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCBCSGGGSSCSS
T ss_pred hcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC----ccccccccccccc
Confidence 458999999999987642 2256789999999999999999999999999988 4444
Q ss_pred -----CccchH--------HHHHHHHHh---CCCCCCcccCCCCCcHHHHHHHcCC---------HHHHHHHHhcCCccc
Q 047641 62 -----RVETAI--------IHVVEILSR---KDPDYPYSANNYGKMPLYMAVEKGC---------LEMVDVLLSTYTFMS 116 (132)
Q Consensus 62 -----~~~~~l--------~~~~~~L~~---~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~l~~~g~~~~ 116 (132)
.|.||+ .+++++|++ .|++++ ..+..|+||||+|+..|+ .+++++|++.|++++
T Consensus 142 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~-~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 142 RPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADIS-ARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp SCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCce-eeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 799999 899999999 899988 788999999999999998 799999999999996
Q ss_pred -------cCCCCCCChhhhhhcC
Q 047641 117 -------HGSPSGKTALHAAARE 132 (132)
Q Consensus 117 -------~~~~~g~tpl~~a~~~ 132 (132)
..+..|+||||+|++.
T Consensus 221 ~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 221 PTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp TTCCGGGCCCTTSCCHHHHHHHT
T ss_pred cccccccccCCCCCCHHHHHHHh
Confidence 4899999999999863
No 49
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=4.9e-26 Score=145.88 Aligned_cols=127 Identities=17% Similarity=0.126 Sum_probs=77.6
Q ss_pred cchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCC--------------------------
Q 047641 3 NASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGD-------------------------- 56 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~-------------------------- 56 (132)
.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.+++++..+
T Consensus 102 ~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 181 (285)
T 3d9h_A 102 GGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGG 181 (285)
T ss_dssp TTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 455566666666655555555666666666666666666666655555443000
Q ss_pred -C-CCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChh
Q 047641 57 -K-EPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTAL 126 (132)
Q Consensus 57 -~-~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl 126 (132)
. ..+..|.||+ .+++++|++.|++++ .+..|.||||+|+..++.+++++|+++|++++..|..|+|||
T Consensus 182 ~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l 259 (285)
T 3d9h_A 182 NIDHKISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPV 259 (285)
T ss_dssp CTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGG
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 0 3444455555 566666666666665 356667777777777777777777777777777777777777
Q ss_pred hhhhc
Q 047641 127 HAAAR 131 (132)
Q Consensus 127 ~~a~~ 131 (132)
|+|+.
T Consensus 260 ~~A~~ 264 (285)
T 3d9h_A 260 ELVPP 264 (285)
T ss_dssp GGSCT
T ss_pred HHhcC
Confidence 77653
No 50
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=3e-26 Score=146.37 Aligned_cols=124 Identities=23% Similarity=0.232 Sum_probs=112.9
Q ss_pred cchHHHHHHHHhcccC--cccccCCCCcHHHHHHHhCcHHHHHHHHHhcc-cccCCCCCCCCCccchH------------
Q 047641 3 NASTKFVKEILSICLS--LLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAK-VAQHGDKEPNGRVETAI------------ 67 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~--~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~~~~~~~l------------ 67 (132)
.|+.+.++.+++.+.+ ++.+|..|.||||+|+..|+.+++++|++.|+ +++ ..+..|.+|+
T Consensus 86 ~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~----~~~~~g~tpL~~a~~~~~~~~~ 161 (276)
T 4hbd_A 86 RRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVD----KQNRAGYSPIMLTALATLKTQD 161 (276)
T ss_dssp HHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTT----CCCTTSCCHHHHGGGCCCCSHH
T ss_pred HHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCC----CCCCCCCCHHHHHHHHHhhhhh
Confidence 4667788888887766 88999999999999999999999999999998 787 7888999998
Q ss_pred -HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 68 -IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 68 -~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
.+++++|+..|.... ..+..|+||||+|+..|+.+++++|++.|++++..|..|+||||+|++
T Consensus 162 ~~~~v~~Ll~~g~~~~-~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~ 225 (276)
T 4hbd_A 162 DIETVLQLFRLGNINA-KASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACE 225 (276)
T ss_dssp HHHHHHHHHHHSCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred hHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Confidence 678999999997765 678889999999999999999999999999999999999999999985
No 51
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=5.1e-26 Score=152.93 Aligned_cols=125 Identities=22% Similarity=0.269 Sum_probs=104.4
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.++..|.||||+|+..|+.+++++|++.+++++ ..+..|.+|+ .+++++
T Consensus 221 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~----~~~~~g~t~L~~A~~~~~~~~~~~ 296 (437)
T 1n11_A 221 KQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN----LGNKSGLTPLHLVAQEGHVPVADV 296 (437)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT----CCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC----CCCCCCCCHHHHHHHcCCHHHHHH
Confidence 3567778888888877777777788888888888888888888888887777 6777788888 778888
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|++.|.+++ ..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|++
T Consensus 297 Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~ 353 (437)
T 1n11_A 297 LIKHGVMVD-ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQ 353 (437)
T ss_dssp HHHHTCCTT-CCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHhCCccCC-CCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 888888877 677889999999999999999999999999999999999999999875
No 52
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=1.2e-25 Score=146.84 Aligned_cols=62 Identities=32% Similarity=0.340 Sum_probs=48.4
Q ss_pred HHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 69 HVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 69 ~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
.++++|++.|.+++ ..+..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|++
T Consensus 228 ~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~ 289 (351)
T 3utm_A 228 QVAELLLRKGANVN-EKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAAL 289 (351)
T ss_dssp HHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCCcC-CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 35556666666665 567778888888888888888888888888888888888888888875
No 53
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=1.7e-25 Score=142.40 Aligned_cols=125 Identities=20% Similarity=0.258 Sum_probs=116.3
Q ss_pred CcchHHHHHHHHhcccCcccc-cCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQV-NAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
+.|+.+++++|++.+.+++.+ +..|.||||+|+..|+.+++++|++.|++++ ..+..|.+|+ .++++
T Consensus 14 ~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~ 89 (285)
T 1wdy_A 14 QNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV----LRKKNGATPFLLAAIAGSVKLLK 89 (285)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc----ccCCCCCCHHHHHHHcCCHHHHH
Confidence 578999999999999998877 7789999999999999999999999999988 7888999999 88999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccC----------CCCCCChhhhhhc
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHG----------SPSGKTALHAAAR 131 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~----------~~~g~tpl~~a~~ 131 (132)
+|++.|.+++ ..+..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|++
T Consensus 90 ~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T 1wdy_A 90 LFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp HHHHTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred HHHHcCCCCC-ccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHH
Confidence 9999999987 67889999999999999999999999999999887 7889999999985
No 54
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=6e-27 Score=138.15 Aligned_cols=121 Identities=13% Similarity=0.182 Sum_probs=79.2
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccc-hH--------HHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVET-AI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~-~l--------~~~~~ 72 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+ .|+.+++++|++.|++++ ..+..|++ |+ .++++
T Consensus 21 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~----~~d~~g~ttpL~~A~~~~~~~~v~ 95 (156)
T 1bi7_B 21 ARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPN----CADPATLTRPVHDAAREGFLDTLV 95 (156)
T ss_dssp HHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC----CCCTTTCCCHHHHHHHHTCHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCC----CcCCCCCcHHHHHHHHCCCHHHHH
Confidence 356777777777777777777777777777764 777777777777777777 66677777 77 67777
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhh
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHA 128 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~ 128 (132)
+|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||.+-
T Consensus 96 ~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 96 VLHRAGARLD-VRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp HHHHHTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHHHcCCCCc-ccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCccccc
Confidence 7777777766 567777777777777777777777777777777777777777653
No 55
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=5e-26 Score=149.91 Aligned_cols=129 Identities=20% Similarity=0.243 Sum_probs=87.5
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCC-----------------------
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKE----------------------- 58 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~----------------------- 58 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 29 ~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~ 108 (364)
T 3ljn_A 29 RKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAK 108 (364)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhcc
Confidence 468999999999999999999999999999999999999999999998855410000
Q ss_pred -------------------------CCCCccchH----------HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHH
Q 047641 59 -------------------------PNGRVETAI----------IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLE 103 (132)
Q Consensus 59 -------------------------~~~~~~~~l----------~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 103 (132)
.+..|.||+ .+++++|++.|++++ ..+..|.||||+|+..|+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~-~~d~~g~t~L~~A~~~g~~~ 187 (364)
T 3ljn_A 109 ERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT-AKDKADETPLMRAMEFRNRE 187 (364)
T ss_dssp HHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHTTCHH
T ss_pred ccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHH
Confidence 222344444 345555555555554 45555566666666666666
Q ss_pred HHHHHHhcCCc-----cccCCCCCCChhhhhhc
Q 047641 104 MVDVLLSTYTF-----MSHGSPSGKTALHAAAR 131 (132)
Q Consensus 104 ~~~~l~~~g~~-----~~~~~~~g~tpl~~a~~ 131 (132)
++++|++.|++ ++..+..|+||||+|++
T Consensus 188 ~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~ 220 (364)
T 3ljn_A 188 ALDLMMDTVPSKSSLRLDYANKQGNSHLHWAIL 220 (364)
T ss_dssp HHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHT
T ss_pred HHHHHHhcccccccccccccCCCCCcHHHHHHH
Confidence 66666665555 55555566666666554
No 56
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=3.3e-27 Score=143.03 Aligned_cols=123 Identities=11% Similarity=0.009 Sum_probs=108.1
Q ss_pred CcchHHHHHHHHhcccCccccc-CCCCcHHHHHHHhCcH----HHHHHHHHhcccccCCCCCCCCCccchH---------
Q 047641 2 KNASTKFVKEILSICLSLLQVN-AEGDTPLHAAVEFCLS----NVVRVHIKRAKVAQHGDKEPNGRVETAI--------- 67 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------- 67 (132)
+.|+.+.++.++..+. +..+ ..|.||||+|+..++. +++++|++.|++++ .++..|+|||
T Consensus 15 ~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn----~~d~~g~TpLh~a~~~~~~ 88 (186)
T 3t8k_A 15 MLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIK----SRTKEGTTLFFPLFQGGGN 88 (186)
T ss_dssp HHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSS----CCCTTCCCTHHHHHHHCTT
T ss_pred HcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCC----CCCCCCCcHHHHHHHcCCc
Confidence 5688999999988775 3444 6799999999999975 58999999999999 8889999999
Q ss_pred -----HHHHHHHHhCCCCCCcccCCCCC-cHHHHHHHcC-----CHHHHHHHHh-cCCccccCCCCCCChhhhhhc
Q 047641 68 -----IHVVEILSRKDPDYPYSANNYGK-MPLYMAVEKG-----CLEMVDVLLS-TYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 68 -----~~~~~~L~~~~~~~~~~~~~~~~-t~l~~a~~~~-----~~~~~~~l~~-~g~~~~~~~~~g~tpl~~a~~ 131 (132)
.+++++|++.|++++ ..+..|. ||||+|+..+ ..+++++|++ .|++++..|..|+||||+|++
T Consensus 89 ~~~~~~~iv~~Ll~~Gadin-~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~ 163 (186)
T 3t8k_A 89 DITGTTELCKIFLEKGADIT-ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR 163 (186)
T ss_dssp CHHHHHHHHHHHHHTTCCSS-SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred chhhHHHHHHHHHHCCCCCC-ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH
Confidence 257999999999998 7888999 9999999954 4569999999 999999999999999999986
No 57
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.94 E-value=8.6e-26 Score=140.70 Aligned_cols=125 Identities=16% Similarity=0.184 Sum_probs=103.4
Q ss_pred cchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH---------HHHHHH
Q 047641 3 NASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI---------IHVVEI 73 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l---------~~~~~~ 73 (132)
.|+.+++++|++.+.+++.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.+|+ ..++++
T Consensus 86 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~----~~~~~g~t~l~~a~~~~~~~~~~~~ 161 (240)
T 3eu9_A 86 QGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD----MMDQNGMTPLMWAAYRTHSVDPTRL 161 (240)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHHCCSSTTHHH
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc----ccCCCCCcHHHHHHHhCChHHHHHH
Confidence 567778888888877777777788888888888888888888888877777 6677777887 456778
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|+..+.+++...+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|++
T Consensus 162 L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 219 (240)
T 3eu9_A 162 LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQ 219 (240)
T ss_dssp HHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHH
T ss_pred HHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 8888888774333489999999999999999999999999999999999999999986
No 58
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=3.2e-27 Score=147.31 Aligned_cols=108 Identities=16% Similarity=0.104 Sum_probs=69.2
Q ss_pred cchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHH
Q 047641 3 NASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEIL 74 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L 74 (132)
.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .+++++|
T Consensus 31 ~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n----~~d~~g~tpLh~A~~~g~~~~v~~L 106 (229)
T 2vge_A 31 TGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVN----SPDSHGWTPLHCAASCNDTVICMAL 106 (229)
T ss_dssp HTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----CCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 456666666666666666666666666666666666666666666666666 5556666666 5666666
Q ss_pred HhCCCCCCcccCCCCCcHHHHH--HHcCCHHHHHHHHhcCCc
Q 047641 75 SRKDPDYPYSANNYGKMPLYMA--VEKGCLEMVDVLLSTYTF 114 (132)
Q Consensus 75 ~~~~~~~~~~~~~~~~t~l~~a--~~~~~~~~~~~l~~~g~~ 114 (132)
++.|++++...+..|+||||+| +..|+.+++++|++.|++
T Consensus 107 l~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~ 148 (229)
T 2vge_A 107 VQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQS 148 (229)
T ss_dssp HTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH
T ss_pred HHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC
Confidence 6666666533335666666666 666666666666665544
No 59
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=2.3e-25 Score=126.57 Aligned_cols=104 Identities=20% Similarity=0.200 Sum_probs=84.1
Q ss_pred cCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCCcHHH
Q 047641 23 NAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGKMPLY 94 (132)
Q Consensus 23 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t~l~ 94 (132)
+..|.||||+|+..|+.+++++|++.+++++ ..+..|+||+ .+++++|++.|++++ ..+..|+||||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~tpL~ 78 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVN----RTLEGGRKPLHYAADCGQLEILEFLLLKGADIN-APDKHHITPLL 78 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTT----SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcC----ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHH
Confidence 3456677777777777777777777777666 5666777777 667777777777766 67889999999
Q ss_pred HHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 95 MAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 95 ~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|+..++.+++++|+++|++++..+..|.||||+|..
T Consensus 79 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 79 SAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 9999999999999999999999999999999999964
No 60
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=4.8e-25 Score=137.33 Aligned_cols=125 Identities=18% Similarity=0.137 Sum_probs=113.4
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCC-CCCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEP-NGRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~~~~~~l--------~~~~~ 72 (132)
+.|+.+++++|++.+.+++.++..|.||||+|+..|+.+++++|++.+++++ .. +..+.+|+ .++++
T Consensus 18 ~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~----~~~~~~~~t~L~~A~~~~~~~~v~ 93 (240)
T 3eu9_A 18 QYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVD----QLGGDLNSTPLHWATRQGHLSMVV 93 (240)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCBTTTTBCHHHHHHHHTCHHHHH
T ss_pred HcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcch----hhcCCcCCChhHHHHHcCCHHHHH
Confidence 5789999999999999999999999999999999999999999999998766 33 34588999 88999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|++.|.+++ ..+..|.||+|+|+..|+.+++++|++.|++++..+..|.||||+|+.
T Consensus 94 ~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~ 151 (240)
T 3eu9_A 94 QLMKYGADPS-LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAY 151 (240)
T ss_dssp HHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHcCCCCc-ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHH
Confidence 9999999887 678889999999999999999999999999999999999999999983
No 61
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=7.6e-26 Score=141.75 Aligned_cols=122 Identities=16% Similarity=0.050 Sum_probs=94.2
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+.++.|++.|.+++.. ..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .+++++
T Consensus 14 ~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~----~~d~~g~t~L~~A~~~g~~~~v~~ 88 (239)
T 1ycs_B 14 RTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPS----LPNDEGITALHNAVCAGHTEIVKF 88 (239)
T ss_dssp ------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC----CCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred hhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCC----CcCCCCCCHHHHHHHcCCHHHHHH
Confidence 567889999999999987754 778999999999999999999999999988 7889999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCC-Chhhhh
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGK-TALHAA 129 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~-tpl~~a 129 (132)
|++.|++++ ..+..|+||||+|+..|+.+++++|+++|++++..+..|. ||||+|
T Consensus 89 Ll~~ga~~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 89 LVQFGVNVN-AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp HHHHTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHC
T ss_pred HHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHH
Confidence 999999987 7888999999999999999999999999999999998877 999998
No 62
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=5e-25 Score=140.21 Aligned_cols=124 Identities=19% Similarity=0.201 Sum_probs=81.0
Q ss_pred cchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHH
Q 047641 3 NASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEIL 74 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L 74 (132)
.|+.+++++|++.+.+++.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.+|+ .+++++|
T Consensus 49 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~~~~L 124 (285)
T 1wdy_A 49 MSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVN----ECDFYGFTAFMEAAVYGKVKALKFL 124 (285)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT----CBCTTCCBHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----ccCcccCCHHHHHHHhCCHHHHHHH
Confidence 466777777777777777777777777777777777777777777776666 5566666666 5666666
Q ss_pred HhCCCCCCccc---------CCCCCcHHHHHHHcCCHHHHHHHHhc-CCccccCCCCCCChhhhhh
Q 047641 75 SRKDPDYPYSA---------NNYGKMPLYMAVEKGCLEMVDVLLST-YTFMSHGSPSGKTALHAAA 130 (132)
Q Consensus 75 ~~~~~~~~~~~---------~~~~~t~l~~a~~~~~~~~~~~l~~~-g~~~~~~~~~g~tpl~~a~ 130 (132)
++.|.+++... +..|.||||+|+..|+.+++++|++. |++++..+..|+||||+|+
T Consensus 125 l~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~ 190 (285)
T 1wdy_A 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190 (285)
T ss_dssp HHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHH
T ss_pred HHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 66666554211 44566666666666666666666655 6666666666666666655
No 63
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=2.7e-25 Score=131.06 Aligned_cols=108 Identities=18% Similarity=0.119 Sum_probs=97.9
Q ss_pred cccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH-------HHHHHHHHhCCCCCCcccCCCCCc
Q 047641 19 LLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI-------IHVVEILSRKDPDYPYSANNYGKM 91 (132)
Q Consensus 19 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l-------~~~~~~L~~~~~~~~~~~~~~~~t 91 (132)
....+..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .+++++|++.|++++ ..+..|.|
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~-~~d~~g~t 79 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPN----APNSYGRRPIQVMMMGSARVAELLLLHGAEPN-CADPATLT 79 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTT----CCCSSSCCTTTSSCTTCHHHHHHHHTTTCCCC-CCCTTTCC
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCC----CCCCCCCCHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCc
Confidence 34567789999999999999999999999999988 7888999999 899999999999987 78889999
Q ss_pred -HHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 92 -PLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 92 -~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|||+|+..|+.+++++|+++|++++..+..|+||||+|++
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 120 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEE 120 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999985
No 64
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.93 E-value=4.7e-25 Score=143.97 Aligned_cols=125 Identities=20% Similarity=0.258 Sum_probs=112.7
Q ss_pred CcchHHHHHHHHhcccCcccccC-CCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNA-EGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
++|++++|++||+.|.+++.++. .|.||||+|+..|+.+++++|++.|++++ ..+..+.+++ ...+.
T Consensus 34 ~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~----~~~~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 4g8k_A 34 QNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV----LRKKNGATPFILAAIAGSVKLLK 109 (337)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchh----hhccCCCchhHHHHhcccchhhH
Confidence 57999999999999999998876 59999999999999999999999999998 7788888888 77788
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccC----------CCCCCChhhhhhc
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHG----------SPSGKTALHAAAR 131 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~----------~~~g~tpl~~a~~ 131 (132)
.++..+.+++ ..+..|.||+|+|+..|+.+++++++++|++++.. +..|.||||+|++
T Consensus 110 ~~~~~~~~~~-~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~ 177 (337)
T 4g8k_A 110 LFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 177 (337)
T ss_dssp HHHTTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHH
T ss_pred Hhhhccchhh-hhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHH
Confidence 8888998887 78899999999999999999999999999887754 4468999999985
No 65
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=3e-25 Score=138.36 Aligned_cols=116 Identities=19% Similarity=0.140 Sum_probs=97.9
Q ss_pred HHHHHhcccCcccc---cCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhC
Q 047641 9 VKEILSICLSLLQV---NAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRK 77 (132)
Q Consensus 9 ~~~ll~~~~~~~~~---~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~ 77 (132)
++.|++++.+++.. +..+.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .+++++|++.
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~----~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 76 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPS----QPNEEGITALHNAICGANYSIVDFLITA 76 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTT----CCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCC----CCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 46788888875444 4467778999999999999999999999998 7889999999 8999999999
Q ss_pred CCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCC-CCCCChhhhh
Q 047641 78 DPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGS-PSGKTALHAA 129 (132)
Q Consensus 78 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~-~~g~tpl~~a 129 (132)
|++++ ..+..|+||||+|+..|+.+++++|++.|++++..+ ..|+||||+|
T Consensus 77 ga~~n-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 77 GANVN-SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp TCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred CCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 99987 688899999999999999999999999999999987 6999999999
No 66
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=1.2e-26 Score=144.79 Aligned_cols=126 Identities=23% Similarity=0.226 Sum_probs=109.7
Q ss_pred CcchHHHHHHHHhccc----CcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HH
Q 047641 2 KNASTKFVKEILSICL----SLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IH 69 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~----~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~ 69 (132)
+.|+.+++++|++.+. +++.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.+|+ .+
T Consensus 17 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~ 92 (236)
T 1ikn_D 17 IHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE----LRDFRGNTPLHLACEQGCLA 92 (236)
T ss_dssp HTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSC----CCCTTCCCHHHHHHHHTCHH
T ss_pred HcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----CcCCCCCCHHHHHHHcCCHH
Confidence 3566677777777665 488899999999999999999999999999999988 7888999999 88
Q ss_pred HHHHHHhCCCCC-----CcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCC-CCCChhhhhhc
Q 047641 70 VVEILSRKDPDY-----PYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSP-SGKTALHAAAR 131 (132)
Q Consensus 70 ~~~~L~~~~~~~-----~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~-~g~tpl~~a~~ 131 (132)
++++|+..+.+. ....+..|.||||+|+..|+.+++++|+++|++++..+. .|+||||+|++
T Consensus 93 ~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 93 SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVD 160 (236)
T ss_dssp HHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence 999999988642 235677899999999999999999999999999999997 99999999986
No 67
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=3.2e-25 Score=132.47 Aligned_cols=119 Identities=15% Similarity=0.134 Sum_probs=106.5
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.++..|.||||+|+..++.+++++|++.|++++ ..+..|+||+ .+++++
T Consensus 45 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 120 (172)
T 3v30_A 45 AFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDIN----IYDWNGGTPLLYAVRGNHVKCVEA 120 (172)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCC----CCCCCCCCHHHHHHHcCCHHHHHH
Confidence 4689999999999999999999999999999999999999999999999988 7889999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCCh
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTA 125 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tp 125 (132)
|++.|++++ ..+..|.||+|+|+..|+.+++++|+++|+++...+..|.||
T Consensus 121 Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 121 LLARGADLT-TEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHcCCCcc-ccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 999999987 688899999999999999999999999999999888888887
No 68
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=3.7e-25 Score=134.31 Aligned_cols=108 Identities=21% Similarity=0.231 Sum_probs=102.0
Q ss_pred cccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCC
Q 047641 19 LLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGK 90 (132)
Q Consensus 19 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~ 90 (132)
++.+|..|.||||+|+..|+.+++++|++.+++++ ..+..|+||+ .+++++|++.|++++ ..+..|.
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~ 102 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLE----DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN-TKDFSGK 102 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTT----CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTSC
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccc----cccccCccHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCC
Confidence 57789999999999999999999999999999888 7888999999 889999999999987 6888999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 91 MPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 91 t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
||||+|+..|+.+++++|++.|++++..+..|.||||+|++
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 143 (192)
T 2rfm_A 103 TPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASK 143 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999985
No 69
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=9e-25 Score=140.05 Aligned_cols=119 Identities=19% Similarity=0.219 Sum_probs=99.3
Q ss_pred hHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHh
Q 047641 5 STKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSR 76 (132)
Q Consensus 5 ~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~ 76 (132)
....+..++..+ +++.+|..|.||||+|+..|+.+++++|++.|++++ .. .|+||+ .+++++|++
T Consensus 11 ~~~~v~~lL~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----~~--~g~t~L~~A~~~g~~~~v~~Ll~ 83 (285)
T 3kea_A 11 KSKQLKSFLSSK-DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN----LL--ENEFPLHQAATLEDTKIVKILLF 83 (285)
T ss_dssp CHHHHHHHHHST-TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGS----CC--TTCCHHHHHTTSSSCHHHHHHHH
T ss_pred CHHHHHHHHHhC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC----CC--CCCCHHHHHHHcCCHHHHHHHHH
Confidence 334444445444 478888999999999999999999999999998877 34 478888 788999999
Q ss_pred CCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCC-CChhhhhhc
Q 047641 77 KDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSG-KTALHAAAR 131 (132)
Q Consensus 77 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g-~tpl~~a~~ 131 (132)
.|++++ ..+..|+||||+|+..|+.+++++|++.|++++..+..| .||||+|++
T Consensus 84 ~ga~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~ 138 (285)
T 3kea_A 84 SGLDDS-QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM 138 (285)
T ss_dssp TTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHH
T ss_pred CCCCCC-CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHH
Confidence 998887 678889999999999999999999999999999999888 799999875
No 70
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=6.1e-25 Score=126.84 Aligned_cols=103 Identities=22% Similarity=0.263 Sum_probs=84.2
Q ss_pred CCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCCcHHHH
Q 047641 24 AEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGKMPLYM 95 (132)
Q Consensus 24 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t~l~~ 95 (132)
..+.||||+|+..|+.+++++|++.|++++ ..+..|.||+ .+++++|++.|++++ ..+..|.||||+
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~ 86 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVN----AKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-AVDAIGFTPLHL 86 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCC----CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHH
Confidence 456777777777777777777777777776 5667777777 677777777777766 577789999999
Q ss_pred HHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 96 AVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 96 a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|+..|+.+++++|+++|++++..+..|+||||+|++
T Consensus 87 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~ 122 (136)
T 2jab_A 87 AAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIG 122 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999875
No 71
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=3.8e-25 Score=146.44 Aligned_cols=128 Identities=16% Similarity=0.193 Sum_probs=81.4
Q ss_pred cchHHHHHHHHhcc---cCcccccCCCCcHHHHHHHhC---cHHHHHHHHHhcccccCCCC----CCCCCccchH-----
Q 047641 3 NASTKFVKEILSIC---LSLLQVNAEGDTPLHAAVEFC---LSNVVRVHIKRAKVAQHGDK----EPNGRVETAI----- 67 (132)
Q Consensus 3 ~g~~~~~~~ll~~~---~~~~~~~~~g~t~l~~a~~~~---~~~~~~~ll~~~~~~~~~~~----~~~~~~~~~l----- 67 (132)
.|+.+++++|++.+ .+++..|..|.||||+|+..+ +.+++++|++.|++++..+. ..+..|.||+
T Consensus 209 ~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~ 288 (373)
T 2fo1_E 209 NRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQ 288 (373)
T ss_dssp TTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHS
T ss_pred CCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHH
Confidence 34455555555544 334555555555555555554 55566666666555541100 1344667777
Q ss_pred ---HHHHHHHHhCC-CCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 68 ---IHVVEILSRKD-PDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 68 ---~~~~~~L~~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
.+++++|+..+ .+++ ..+..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|++
T Consensus 289 ~g~~~~v~~Ll~~~~~~~n-~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~ 355 (373)
T 2fo1_E 289 VSNMPIVKYLVGEKGSNKD-KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQA 355 (373)
T ss_dssp SCCHHHHHHHHHHSCCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHH
T ss_pred hCCHHHHHHHHHhcCCCcc-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHH
Confidence 67777777654 6655 567777888888888888888888888888888778788888888765
No 72
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.93 E-value=1.1e-24 Score=142.30 Aligned_cols=125 Identities=23% Similarity=0.233 Sum_probs=109.9
Q ss_pred CcchHHHHHHHHhcccCccc----------ccCCCCcHHHHHHHhCcHHHHHHHHH-hcccccCCCCCCCCCccchH---
Q 047641 2 KNASTKFVKEILSICLSLLQ----------VNAEGDTPLHAAVEFCLSNVVRVHIK-RAKVAQHGDKEPNGRVETAI--- 67 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~----------~~~~g~t~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~~~~l--- 67 (132)
..|+.++++++++.+.+++. .+..|.||||+|++.|+.+++++|++ .|++++ ..+..|.+++
T Consensus 134 ~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n----~~d~~g~t~l~~~ 209 (337)
T 4g8k_A 134 VYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN----ACDNMGRNALIHA 209 (337)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT----CCCTTSCCHHHHH
T ss_pred HcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC----ccCCCCCcHHHHH
Confidence 46788999999999887543 34468999999999999999999996 588888 7888888888
Q ss_pred ---------HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhc-CCccccCCCCCCChhhhhhc
Q 047641 68 ---------IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLST-YTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 68 ---------~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~-g~~~~~~~~~g~tpl~~a~~ 131 (132)
..++++|++.|++++ ..+..|+||||+|+..|+.++++.|++. |++++..|..|+||||+|++
T Consensus 210 ~~~~~~~~~~~i~~lLl~~gad~n-~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~ 282 (337)
T 4g8k_A 210 LLSSDDSDVEAITHLLLDHGADVN-VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVE 282 (337)
T ss_dssp HHHSCTTTHHHHHHHHHHTTCCTT-CCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHH
T ss_pred HHHcCcccHHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHH
Confidence 457889999999987 6888999999999999999999999975 79999999999999999986
No 73
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=1.7e-25 Score=142.37 Aligned_cols=129 Identities=22% Similarity=0.288 Sum_probs=107.3
Q ss_pred CcchHHHHHHHHhc----ccCcc----cccCCCCcHHHHHHHh---CcHHHHHHHHHhcccc-------cCCCCCCCCCc
Q 047641 2 KNASTKFVKEILSI----CLSLL----QVNAEGDTPLHAAVEF---CLSNVVRVHIKRAKVA-------QHGDKEPNGRV 63 (132)
Q Consensus 2 ~~g~~~~~~~ll~~----~~~~~----~~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~-------~~~~~~~~~~~ 63 (132)
+.|+.++++.|++. +.+++ .+|..|.||||+|+.. |+.+++++|++.|+++ +......+..|
T Consensus 22 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g 101 (273)
T 2pnn_A 22 AQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKG 101 (273)
T ss_dssp HTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTT
T ss_pred HcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCC
Confidence 46777888888774 33333 3578999999999987 9999999999998763 21011245689
Q ss_pred cchH--------HHHHHHHHhCCCCCCcccCC--------------CCCcHHHHHHHcCCHHHHHHHHh---cCCccccC
Q 047641 64 ETAI--------IHVVEILSRKDPDYPYSANN--------------YGKMPLYMAVEKGCLEMVDVLLS---TYTFMSHG 118 (132)
Q Consensus 64 ~~~l--------~~~~~~L~~~~~~~~~~~~~--------------~~~t~l~~a~~~~~~~~~~~l~~---~g~~~~~~ 118 (132)
+||| .+++++|++.|++++ ..+. .|.||||+|+..|+.+++++|++ .|++++..
T Consensus 102 ~tpL~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~ 180 (273)
T 2pnn_A 102 QTALHIAIERRNMTLVTLLVENGADVQ-AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISAR 180 (273)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCcC-ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceee
Confidence 9999 889999999999987 4444 79999999999999999999999 99999999
Q ss_pred CCCCCChhhhhhc
Q 047641 119 SPSGKTALHAAAR 131 (132)
Q Consensus 119 ~~~g~tpl~~a~~ 131 (132)
|..|+||||+|++
T Consensus 181 d~~g~tpLh~A~~ 193 (273)
T 2pnn_A 181 DSVGNTVLHALVE 193 (273)
T ss_dssp CTTSCCHHHHHHH
T ss_pred CCCCCcHHHHHHH
Confidence 9999999999985
No 74
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.92 E-value=1.4e-25 Score=141.77 Aligned_cols=129 Identities=22% Similarity=0.248 Sum_probs=106.5
Q ss_pred CcchHHHHH----HHHhcccCccccc----CCCCcHHHHHH---HhCcHHHHHHHHHhcccccC------C-CCCCCCCc
Q 047641 2 KNASTKFVK----EILSICLSLLQVN----AEGDTPLHAAV---EFCLSNVVRVHIKRAKVAQH------G-DKEPNGRV 63 (132)
Q Consensus 2 ~~g~~~~~~----~ll~~~~~~~~~~----~~g~t~l~~a~---~~~~~~~~~~ll~~~~~~~~------~-~~~~~~~~ 63 (132)
+.|+.+.++ ++++.+.+++..+ ..|.||||+|+ ..|+.+++++|++.|+++.. . ....+..|
T Consensus 14 ~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g 93 (260)
T 3jxi_A 14 SRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRG 93 (260)
T ss_dssp HHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEES
T ss_pred HhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCC
Confidence 356677544 4445888776655 77999999999 67999999999999876321 0 01245589
Q ss_pred cchH--------HHHHHHHHhCCCCCCcccC--------------CCCCcHHHHHHHcCCHHHHHHHHh---cCCccccC
Q 047641 64 ETAI--------IHVVEILSRKDPDYPYSAN--------------NYGKMPLYMAVEKGCLEMVDVLLS---TYTFMSHG 118 (132)
Q Consensus 64 ~~~l--------~~~~~~L~~~~~~~~~~~~--------------~~~~t~l~~a~~~~~~~~~~~l~~---~g~~~~~~ 118 (132)
+||+ .+++++|++.|++++ ..+ ..|.||||+|+..|+.+++++|++ .|++++..
T Consensus 94 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~ 172 (260)
T 3jxi_A 94 QTALHIAIERRCKHYVELLVEKGADVH-AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQ 172 (260)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCcC-ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCccc
Confidence 9999 899999999999987 455 589999999999999999999999 99999999
Q ss_pred CCCCCChhhhhhc
Q 047641 119 SPSGKTALHAAAR 131 (132)
Q Consensus 119 ~~~g~tpl~~a~~ 131 (132)
|..|+||||+|++
T Consensus 173 d~~g~TpLh~A~~ 185 (260)
T 3jxi_A 173 DSRGNTVLHALVA 185 (260)
T ss_dssp CTTSCCHHHHHHH
T ss_pred CCCCCcHHHHHHH
Confidence 9999999999983
No 75
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=4.8e-25 Score=145.95 Aligned_cols=126 Identities=17% Similarity=0.175 Sum_probs=107.2
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhc---ccccCCCCCCCCCccchH-----------
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRA---KVAQHGDKEPNGRVETAI----------- 67 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~---~~~~~~~~~~~~~~~~~l----------- 67 (132)
+.|+.+++++|++.+.+++.++..|.||||+|+..|+.+++++|++.+ .+++ ..+..|.||+
T Consensus 175 ~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~----~~d~~g~t~L~~A~~~~~~~~ 250 (373)
T 2fo1_E 175 LARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE----ELDRNGMTALMIVAHNEGRDQ 250 (373)
T ss_dssp HHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS----CCCTTSCCHHHHHHHSCSTTH
T ss_pred HcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChh----hcCCCCCCHHHHHHHhCCcch
Confidence 457888889999888888888888899999999999999999888877 5666 6778888888
Q ss_pred HHHHHHHHhCCCCCCc-------ccCCCCCcHHHHHHHcCCHHHHHHHHhcC-CccccCCCCCCChhhhhhc
Q 047641 68 IHVVEILSRKDPDYPY-------SANNYGKMPLYMAVEKGCLEMVDVLLSTY-TFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 68 ~~~~~~L~~~~~~~~~-------~~~~~~~t~l~~a~~~~~~~~~~~l~~~g-~~~~~~~~~g~tpl~~a~~ 131 (132)
.+++++|++.|.+++. ..+..|.||||+|+..|+.+++++|++.+ ++++..|..|+||||+|++
T Consensus 251 ~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~ 322 (373)
T 2fo1_E 251 VASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQ 322 (373)
T ss_dssp HHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHH
Confidence 5678899998888752 24568999999999999999999999886 9999999999999999985
No 76
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.92 E-value=1.3e-24 Score=141.89 Aligned_cols=125 Identities=18% Similarity=0.208 Sum_probs=116.1
Q ss_pred CcchHHHHHHHHhc-ccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSI-CLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
+.|+.+.++.++.. +.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .++++
T Consensus 33 ~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~g~~~iv~ 108 (351)
T 3utm_A 33 RSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH----AKDKGGLVPLHNACSYGHYEVTE 108 (351)
T ss_dssp HHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----ccCCCCCcHHHHHHHCCCHHHHH
Confidence 56889999999876 44588999999999999999999999999999999998 7889999999 89999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|+.
T Consensus 109 ~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~ 166 (351)
T 3utm_A 109 LLLKHGACVN-AMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPT 166 (351)
T ss_dssp HHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSS
T ss_pred HHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhh
Confidence 9999999987 688899999999999999999999999999999999999999999863
No 77
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=3.9e-24 Score=121.45 Aligned_cols=100 Identities=29% Similarity=0.429 Sum_probs=50.3
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCCcHHHHHH
Q 047641 26 GDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGKMPLYMAV 97 (132)
Q Consensus 26 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~ 97 (132)
|.||||+|++.|+.+++++|++.+++++ ..+..|.+|+ .+++++|++.|.+++ ..+..|.||+|+|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~ 76 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVN----AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAA 76 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTT----CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCC----CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCcHHHHHH
Confidence 4444444444444444444444444444 3344444444 444444444444443 34445555555555
Q ss_pred HcCCHHHHHHHHhcCCccccCCCCCCChhhhhh
Q 047641 98 EKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 130 (132)
Q Consensus 98 ~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~ 130 (132)
..++.+++++|+++|++++..+..|.||||+|+
T Consensus 77 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~ 109 (126)
T 1n0r_A 77 RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAA 109 (126)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HcChHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 555555555555555555555555555555554
No 78
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=5.4e-25 Score=142.15 Aligned_cols=119 Identities=19% Similarity=0.107 Sum_probs=105.9
Q ss_pred CcchHHHHHHHHhcccCccc------ccCCCCcHHHHHHHh---CcHHHHHHHHHhcccccCCCCCCCCCccchH-----
Q 047641 2 KNASTKFVKEILSICLSLLQ------VNAEGDTPLHAAVEF---CLSNVVRVHIKRAKVAQHGDKEPNGRVETAI----- 67 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~------~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l----- 67 (132)
+.|+++.++.|++.+.+++. .+..|.||||+|+.. ++.+++++|++.|++++ .++..|+|||
T Consensus 160 ~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn----~~d~~G~TpLh~A~~ 235 (301)
T 2b0o_E 160 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD----AKAADGNTALHYAAL 235 (301)
T ss_dssp HTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT----CCCTTCCCHHHHHHH
T ss_pred hccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC----CCCCCCCCHHHHHHH
Confidence 46888999999999998777 688999999999997 88999999999999998 7889999999
Q ss_pred ---HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 68 ---IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 68 ---~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
.+++++|++.|++++ ..+..|.||||+|+..++.+++++|++.|++ .|.||||+|++
T Consensus 236 ~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~ 295 (301)
T 2b0o_E 236 YNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYS 295 (301)
T ss_dssp TTCHHHHHHHHHTTCCCS-CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC----
T ss_pred cCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHh
Confidence 889999999999987 7889999999999999999999999999886 57899999986
No 79
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=3.7e-25 Score=127.75 Aligned_cols=107 Identities=13% Similarity=0.242 Sum_probs=100.9
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCC-ccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGR-VETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~~~~l--------~~~~~ 72 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+. ++.+++++|++.|++++ .++.. |+||+ .++++
T Consensus 21 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~----~~~~~~g~t~L~~A~~~~~~~~v~ 95 (136)
T 1d9s_A 21 ARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN----CADPATLTRPVHDAAREGFLDTLV 95 (136)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS----CCBTTTTBCHHHHHHHHTCHHHHH
T ss_pred HcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC----CcCCCCCCCHHHHHHHcCCHHHHH
Confidence 5788999999999999999999999999999999 99999999999999988 78888 99999 88999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCc
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTF 114 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~ 114 (132)
+|++.|++++ ..+..|.||+|+|+..++.+++++|+++|+|
T Consensus 96 ~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 96 VLHRAGARLD-VCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHTCCCCC-CCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999987 7888999999999999999999999999875
No 80
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=3.1e-24 Score=123.88 Aligned_cols=106 Identities=16% Similarity=0.253 Sum_probs=99.4
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..++.+++++|++.|++++ ..+..|.||+ .+++++
T Consensus 23 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~d~~g~t~L~~A~~~~~~~~v~~ 98 (136)
T 2jab_A 23 RAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN----AVDAIGFTPLHLAAFIGHLEIAEV 98 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----cCCCCCCCHHHHHHHcCCHHHHHH
Confidence 5689999999999999999999999999999999999999999999999988 7888999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTY 112 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g 112 (132)
|++.|++++ ..+..|.||+|+|+..|+.+++++|+++|
T Consensus 99 Ll~~g~~~~-~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 99 LLKHGADVN-AQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHcCCCCc-CcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999987 68889999999999999999999999876
No 81
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=1.1e-23 Score=124.49 Aligned_cols=107 Identities=13% Similarity=0.101 Sum_probs=99.4
Q ss_pred chHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHH
Q 047641 4 ASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILS 75 (132)
Q Consensus 4 g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~ 75 (132)
|+.+++++|++.+.+++.++..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .+++++|+
T Consensus 48 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll 123 (162)
T 1ihb_A 48 GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVN----IEDNEGNLPLHLAAKEGHLRVVEFLV 123 (162)
T ss_dssp SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----CcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999988 7888999999 88999999
Q ss_pred hCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCc
Q 047641 76 RKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTF 114 (132)
Q Consensus 76 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~ 114 (132)
+.|.+.....+..|.||+|+|+..|+.+++++|+++|+|
T Consensus 124 ~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 124 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999885447888999999999999999999999999986
No 82
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=1.1e-24 Score=131.44 Aligned_cols=104 Identities=20% Similarity=0.143 Sum_probs=94.7
Q ss_pred cCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCCcHHH
Q 047641 23 NAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGKMPLY 94 (132)
Q Consensus 23 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t~l~ 94 (132)
+..|.||||+|+..|+.++++.|++ +.+++ ..+..|+||+ .+++++|++.|++++...+..|+||||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~----~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVD----AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTT----CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCC----CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHH
Confidence 4578899999999999999999999 88888 7888999999 889999999999987444488999999
Q ss_pred HHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 95 MAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 95 ~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|+..|+.+++++|+++|++++..|..|+||||+|++
T Consensus 116 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 116 MAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 152 (183)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999975
No 83
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=1.9e-24 Score=133.89 Aligned_cols=106 Identities=22% Similarity=0.208 Sum_probs=98.2
Q ss_pred cccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhC-CCCCCcccCCCCCc
Q 047641 21 QVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRK-DPDYPYSANNYGKM 91 (132)
Q Consensus 21 ~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~-~~~~~~~~~~~~~t 91 (132)
..+..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .+++++|+.. |.+++ ..+..|+|
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~-~~d~~g~t 142 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGVN----GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN-QQNKLGDT 142 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC-CCCTTSCC
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCCcc----ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc-ccCCCCCC
Confidence 345678999999999999999999999999888 7888999999 8899999998 88887 78899999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 92 PLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 92 ~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
|||+|+..|+.+++++|+++|++++..+..|+||||+|+.
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 182 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATN 182 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcc
Confidence 9999999999999999999999999999999999999975
No 84
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=8.9e-24 Score=119.96 Aligned_cols=108 Identities=25% Similarity=0.386 Sum_probs=101.7
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.++..|.||||+|+..++.+++++|++.|++++ .++..|.+|+ .+++++
T Consensus 11 ~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~~~~g~t~l~~A~~~~~~~~~~~ 86 (126)
T 1n0r_A 11 RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN----AKDKNGRTPLHLAARNGHLEVVKL 86 (126)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc----ccCCCCCcHHHHHHHcChHHHHHH
Confidence 4688999999999999999999999999999999999999999999999988 7888999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCc
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTF 114 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~ 114 (132)
|++.|++++ ..+..|.||+|+|+..++.+++++|+++|+|
T Consensus 87 Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 87 LLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHcCCCCc-ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999987 6888999999999999999999999999986
No 85
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.91 E-value=1.2e-23 Score=125.07 Aligned_cols=102 Identities=21% Similarity=0.175 Sum_probs=96.6
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCCcHHHHH
Q 047641 25 EGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGKMPLYMA 96 (132)
Q Consensus 25 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t~l~~a 96 (132)
.|.||||.|+..|+.++++.|++.+.+++ ..+..|.||+ .+++++|++.|.+++ ..+..|.||||+|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A 76 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVIN----HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ-LLGKGRESALSLA 76 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTT----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcC----CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CcCCCCCcHHHHH
Confidence 58899999999999999999999998888 7888999999 899999999999987 6788999999999
Q ss_pred HHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 97 VEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 97 ~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+..|+.+++++|++.|++++..+..|.||||+|++
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 111 (167)
T 3v31_A 77 CSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVH 111 (167)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999986
No 86
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=6.3e-25 Score=137.58 Aligned_cols=125 Identities=14% Similarity=0.081 Sum_probs=112.5
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++ .++..|+||+ .+++++
T Consensus 46 ~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----~~d~~g~tpL~~A~~~~~~~~v~~ 121 (239)
T 1ycs_B 46 LEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN----AADSDGWTPLHCAASCNNVQVCKF 121 (239)
T ss_dssp HHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT----CCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----ccCCCCCCHHHHHHHcCCHHHHHH
Confidence 4689999999999999999999999999999999999999999999999998 7888999999 899999
Q ss_pred HHhCCCCCCcccCCCCC-cHHHHH--HHcCCHHHHHHHHhcCCccccC---------CCCCCChhhhhhc
Q 047641 74 LSRKDPDYPYSANNYGK-MPLYMA--VEKGCLEMVDVLLSTYTFMSHG---------SPSGKTALHAAAR 131 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~-t~l~~a--~~~~~~~~~~~l~~~g~~~~~~---------~~~g~tpl~~a~~ 131 (132)
|++.|++++ ..+..+. ||+|+| +..|+.+++++|++.|++++.. +..+.+|++++.+
T Consensus 122 Ll~~ga~~~-~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~ 190 (239)
T 1ycs_B 122 LVESGAAVF-AMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMK 190 (239)
T ss_dssp HHHTTCCTT-CCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBC
T ss_pred HHHcCCCcc-eecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCccccc
Confidence 999999988 5565555 999999 8889999999999999887765 5678888887764
No 87
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=4e-24 Score=134.37 Aligned_cols=104 Identities=20% Similarity=0.143 Sum_probs=88.0
Q ss_pred cCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCCcHHH
Q 047641 23 NAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGKMPLY 94 (132)
Q Consensus 23 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t~l~ 94 (132)
+..|.||||+|++.|+.++++.|++ +++++ ..+..|+||+ .+++++|++.|++++...+..|+||||
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~ 116 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVD----AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALH 116 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTT----CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCC----CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHH
Confidence 3467788888888888888888888 77777 6777788888 778888888888876333478999999
Q ss_pred HHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 95 MAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 95 ~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
+|+..|+.+++++|+++|++++..+..|+||||+|++
T Consensus 117 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 117 MAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 9999999999999999999999999999999999974
No 88
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=2.1e-24 Score=140.72 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=88.6
Q ss_pred hHHHHHHHHhcccCccc-ccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH-------H----HHHH
Q 047641 5 STKFVKEILSICLSLLQ-VNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI-------I----HVVE 72 (132)
Q Consensus 5 ~~~~~~~ll~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l-------~----~~~~ 72 (132)
..++++.|++.+.+++. +|..|.||||+|+..|+.+++++|++.|++++ .++..|+||+ . ++++
T Consensus 109 ~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n----~~d~~g~TpLh~A~~~g~~~~~~~~~ 184 (327)
T 1sw6_A 109 LQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL----YGDNMGESCLVKAVKSVNNYDSGTFE 184 (327)
T ss_dssp HHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----BCCTTCCCHHHHHHHSSHHHHTTCHH
T ss_pred HHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC----CcCCCCCCHHHHHHHhcccccHHHHH
Confidence 34677778888888999 89999999999999999999999999999999 8889999999 1 4456
Q ss_pred HHHhCC-CCCCcccCCCCCcHHHHHHH----cCCHHHHHHHHhcC
Q 047641 73 ILSRKD-PDYPYSANNYGKMPLYMAVE----KGCLEMVDVLLSTY 112 (132)
Q Consensus 73 ~L~~~~-~~~~~~~~~~~~t~l~~a~~----~~~~~~~~~l~~~g 112 (132)
.|++.+ .+++ ..+..|+||||+|+. .|+.+++++|++.+
T Consensus 185 ~ll~~~~~~~~-~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 185 ALLDYLYPCLI-LEDSMNRTILHHIIITSGMTGCSAAAKYYLDIL 228 (327)
T ss_dssp HHHHHHGGGGG-EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred HHHHhhhcccc-CCCCCCCCHHHHHHHHccccccHHHHHHHHHHH
Confidence 777665 4454 688899999999999 89999999998874
No 89
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=3.9e-23 Score=141.26 Aligned_cols=116 Identities=18% Similarity=0.050 Sum_probs=100.0
Q ss_pred CcchHHHHHHHHhcccCcccc------cCCCCcHHHHHHH---hCcHHHHHHHHHhcccccCCCCCCCCCccchH-----
Q 047641 2 KNASTKFVKEILSICLSLLQV------NAEGDTPLHAAVE---FCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI----- 67 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~------~~~g~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l----- 67 (132)
+.|+.+.++.|++.|.+++.+ +..|.||||+|++ .|+.+++++|++.|++++ .++..|+|||
T Consensus 141 ~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn----~~d~~g~TpLh~A~~ 216 (497)
T 3lvq_E 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD----AKAADGNTALHYAAL 216 (497)
T ss_dssp HHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT----CCCSSSCCHHHHHTT
T ss_pred hccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCC----ccCCCCCcHHHHHHH
Confidence 468899999999999998776 8899999999976 899999999999999999 8889999999
Q ss_pred ---HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCC
Q 047641 68 ---IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSG 122 (132)
Q Consensus 68 ---~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g 122 (132)
.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++.|++++......
T Consensus 217 ~g~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~ 273 (497)
T 3lvq_E 217 YNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHV 273 (497)
T ss_dssp TTCHHHHHHHHHTCCCCS-CCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---------
T ss_pred cCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCccee
Confidence 899999999999988 789999999999999999999999999999988643333
No 90
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.90 E-value=2.1e-23 Score=125.34 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=108.4
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.||+ .+++++
T Consensus 48 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~d~~g~t~L~~A~~~~~~~~v~~ 123 (179)
T 3f6q_A 48 REGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADIN----AVNEHGNVPLHYACFWGQDQVAED 123 (179)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----ccCCCCCCHHHHHHHcCCHHHHHH
Confidence 4688999999999999999999999999999999999999999999999998 7889999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCC
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSG 122 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g 122 (132)
|++.|++++ ..+..|.||+++|+..++.+++++|++.|++++..+..+
T Consensus 124 Ll~~ga~~~-~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 124 LVANGALVS-ICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp HHHTTCCSS-BCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred HHHCCCCcc-hhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 999999987 789999999999999999999999999999998766544
No 91
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.90 E-value=1.3e-22 Score=120.92 Aligned_cols=106 Identities=21% Similarity=0.339 Sum_probs=99.3
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.||+ .+++++
T Consensus 56 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 131 (169)
T 2y1l_E 56 FNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVN----ANDMEGHTPLHLAAMFGHLEIVEV 131 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----CCCCCCCCHHHHHHHcCCHHHHHH
Confidence 4688999999999999999999999999999999999999999999999988 7888999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTY 112 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g 112 (132)
|++.|++++ ..+..|.||+|+|+..|+.+++++|++.|
T Consensus 132 Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 132 LLKNGADVN-AQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHcCCCCC-CcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999987 78899999999999999999999999876
No 92
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=2.5e-22 Score=118.08 Aligned_cols=105 Identities=24% Similarity=0.358 Sum_probs=97.9
Q ss_pred CCcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHH
Q 047641 1 TKNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 1 a~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
+..|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .++++
T Consensus 43 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~ 118 (156)
T 1bd8_A 43 MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN----VPDGTGALPIHLAVQEGHTAVVS 118 (156)
T ss_dssp SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC----CCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC----CcCCCCCcHHHHHHHhChHHHHH
Confidence 46789999999999999999999999999999999999999999999999988 7888999999 88999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLST 111 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~ 111 (132)
+|++. .+++ ..+..|.||+|+|+..|+.+++++|+++
T Consensus 119 ~Ll~~-~~~~-~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 119 FLAAE-SDLH-RRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHTT-SCTT-CCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHhc-cCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99988 7776 6888999999999999999999999874
No 93
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=4.6e-23 Score=115.70 Aligned_cols=103 Identities=20% Similarity=0.246 Sum_probs=92.5
Q ss_pred ccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCCc
Q 047641 20 LQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGKM 91 (132)
Q Consensus 20 ~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t 91 (132)
.++|..|.||||+|+..|+.+++++|++.+++++ ..+..|.+|+ .+++++|++.|++++ ..+..|.|
T Consensus 3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~t 77 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVN----ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN-ARSKDGNT 77 (115)
T ss_dssp -CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSS----CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT-CCCTTCCC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCC
Confidence 3578899999999999999999999999999988 7888999999 889999999999987 68889999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhh
Q 047641 92 PLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALH 127 (132)
Q Consensus 92 ~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~ 127 (132)
|||+|+..++.+++++|+++|++++..+..|.+|-.
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~~ 113 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC----
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCcCCcccccccc
Confidence 999999999999999999999999999999998853
No 94
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.89 E-value=3.6e-22 Score=117.19 Aligned_cols=102 Identities=21% Similarity=0.257 Sum_probs=96.2
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||+ .+++++
T Consensus 43 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 118 (153)
T 1awc_B 43 QYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVN----AKDMLKMTALHWATEHNHQEVVEL 118 (153)
T ss_dssp HHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCC----CCCCCCCCHHHHHHHcCCHHHHHH
Confidence 4688999999999999999999999999999999999999999999999998 7889999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHH
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVL 108 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l 108 (132)
|++.|++++ ..+..|.||+|+|+..|+.+++++|
T Consensus 119 Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 119 LIKYGADVH-TQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999987 6888999999999999999999987
No 95
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=1.9e-22 Score=122.12 Aligned_cols=110 Identities=6% Similarity=0.019 Sum_probs=98.0
Q ss_pred hHHHHHHHHhcccCcccccCCCCcHHHHHHHhCc------HHHHHHHHHhcccccCCCCCCCCCcc-chH----------
Q 047641 5 STKFVKEILSICLSLLQVNAEGDTPLHAAVEFCL------SNVVRVHIKRAKVAQHGDKEPNGRVE-TAI---------- 67 (132)
Q Consensus 5 ~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~------~~~~~~ll~~~~~~~~~~~~~~~~~~-~~l---------- 67 (132)
+.+++++|++.|.+++.+|..|.||||+|+..++ .+++++|++.|++++ .++..|+ +|+
T Consensus 54 ~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin----~~d~~g~ttpLh~A~~~~~~~ 129 (186)
T 3t8k_A 54 RYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT----ALYKPYKIVVFKNIFNYFVDE 129 (186)
T ss_dssp HHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS----SCBGGGTBCTTGGGGGCCSCH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC----ccCCCcCchHHHHHHHcCCCh
Confidence 3569999999999999999999999999999986 578999999999999 7888999 888
Q ss_pred ---HHHHHHHHh-CCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCC
Q 047641 68 ---IHVVEILSR-KDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGS 119 (132)
Q Consensus 68 ---~~~~~~L~~-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~ 119 (132)
..++++|+. .|++++ ..+..|.||||+|+..|+.+++++|.++..+.+.++
T Consensus 130 ~~~~~iv~~Ll~~~gad~~-~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 130 NEMIPLYKLIFSQSGLQLL-IKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHHHHHHHHHHTSTTCCTT-CCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred hhHHHHHHHHHHhcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 358899999 999998 799999999999999999999999998865555443
No 96
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.88 E-value=1e-22 Score=120.78 Aligned_cols=106 Identities=19% Similarity=0.250 Sum_probs=97.8
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..++.+++++|++.|++++ ..+..|+||+ .+++++
T Consensus 51 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 126 (165)
T 3twr_A 51 GYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVN----VADLWKFTPLHEAAAKGKYEICKL 126 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCC----CcCCCCCCHHHHHHHcCCHHHHHH
Confidence 4688999999999999999999999999999999999999999999999998 7888999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYT 113 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~ 113 (132)
|++.|++++ ..+..|.||+|+|.. ++.+++++|++.|+
T Consensus 127 Ll~~ga~~~-~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 127 LLQHGADPT-KKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHTTCCTT-CCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHcCCCCc-ccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999987 789999999999766 99999999999875
No 97
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=5.8e-22 Score=126.71 Aligned_cols=108 Identities=19% Similarity=0.183 Sum_probs=94.0
Q ss_pred CcchHHHHHHHHhcccC------cccccCCCCcHHHHHHHh---CcHHHHHHHHHhcccccCCCCCCCCCccchH-----
Q 047641 2 KNASTKFVKEILSICLS------LLQVNAEGDTPLHAAVEF---CLSNVVRVHIKRAKVAQHGDKEPNGRVETAI----- 67 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~------~~~~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l----- 67 (132)
+.|.++.++.+++.+.+ ++..+..|.||||+|+.. ++.+++++|++.|++++ .++..|+|||
T Consensus 139 ~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in----~~d~~g~TpLh~A~~ 214 (278)
T 1dcq_A 139 KTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD----KQTGKGSTALHYCCL 214 (278)
T ss_dssp HTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT----CCCTTCCCHHHHHHH
T ss_pred hhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcc----ccCCCCCCHHHHHHH
Confidence 35778889999999988 334478899999999999 89999999999999988 7888899998
Q ss_pred ---HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCc
Q 047641 68 ---IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTF 114 (132)
Q Consensus 68 ---~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~ 114 (132)
.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++
T Consensus 215 ~g~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 215 TDNAECLKLLLRGKASIE-IANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp TTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHcCCCCC-CccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 888999999998887 6788899999999999999999999988875
No 98
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=8.6e-22 Score=106.66 Aligned_cols=85 Identities=27% Similarity=0.439 Sum_probs=60.6
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCCcHHHHH
Q 047641 25 EGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGKMPLYMA 96 (132)
Q Consensus 25 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t~l~~a 96 (132)
+|.||||+|+..|+.+++++|++.|++++ .++..|+||+ .+++++|++.|++++ ..+..|+||+|+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n----~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A 75 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN----AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLA 75 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCc----ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHH
Confidence 37788888888888888888888888777 5556666666 556666666666655 5666777777777
Q ss_pred HHcCCHHHHHHHHhcCCc
Q 047641 97 VEKGCLEMVDVLLSTYTF 114 (132)
Q Consensus 97 ~~~~~~~~~~~l~~~g~~ 114 (132)
+..|+.+++++|++.|++
T Consensus 76 ~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 76 ARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHTTCHHHHHHHHHTTCC
T ss_pred HHcCCHHHHHHHHHcCCC
Confidence 777777777777777654
No 99
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=9.2e-22 Score=129.98 Aligned_cols=123 Identities=15% Similarity=0.181 Sum_probs=94.0
Q ss_pred Cc-chHHHHHHHHhcccCccccc--CCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHH
Q 047641 2 KN-ASTKFVKEILSICLSLLQVN--AEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHV 70 (132)
Q Consensus 2 ~~-g~~~~~~~ll~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~ 70 (132)
+. |++++++.|++.+.+++..+ ..|.||||+|+..|+.+++++|++.|++++ ..+..|+||+ .++
T Consensus 208 ~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn----~~d~~G~TpLh~A~~~g~~~~ 283 (368)
T 3jue_A 208 GHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVN----QADSAGRGPLHHATILGHTGL 283 (368)
T ss_dssp SSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHHTCHHH
T ss_pred HccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCC----CCCCCCCCHHHHHHHcCcHHH
Confidence 45 88999999999999988888 789999999999999999999999999888 7888899998 788
Q ss_pred HHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC---CccccCCCCCCChhhhh
Q 047641 71 VEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTY---TFMSHGSPSGKTALHAA 129 (132)
Q Consensus 71 ~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g---~~~~~~~~~g~tpl~~a 129 (132)
+++|+..|++++ ..+..|.||||+|+..++.+++++|++.+ .+....+..+.|+++++
T Consensus 284 v~~LL~~Gad~~-~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~ 344 (368)
T 3jue_A 284 ACLFLKRGADLG-ARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIF 344 (368)
T ss_dssp HHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------------
T ss_pred HHHHHHCcCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHH
Confidence 999999998887 67888999999999999999999998775 33334455677777654
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=5.4e-23 Score=127.35 Aligned_cols=117 Identities=17% Similarity=0.184 Sum_probs=94.7
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHh-cccccCCCCCCCCCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKR-AKVAQHGDKEPNGRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~~~~l--------~~~~~ 72 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++. |++++ ..+..|+||+ .++++
T Consensus 82 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~----~~d~~g~tpL~~A~~~~~~~~v~ 157 (222)
T 3ehr_A 82 KRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN----QQNKLGDTALHAAAWKGYADIVQ 157 (222)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC----CCCTTSCCHHHHHHHHTCHHHHH
T ss_pred ccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc----ccCCCCCCHHHHHHHcCCHHHHH
Confidence 46889999999999999999999999999999999999999999998 99988 7889999999 88999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCC
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGK 123 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~ 123 (132)
+|++.|++++ ..+..|.||+|+|+..++.++++.+++.|++....+..++
T Consensus 158 ~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 158 LLLAKGARTD-LRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHHHHTCCSC-CCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred HHHHcCCCCc-cccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 9999999987 7899999999999999999999999999988877766554
No 101
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=2.3e-21 Score=128.08 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=95.9
Q ss_pred CCCCcHHHHHHHh-CcHHHHHHHHHhcccccCCCCCCC--CCccchH--------HHHHHHHHhCCCCCCcccCCCCCcH
Q 047641 24 AEGDTPLHAAVEF-CLSNVVRVHIKRAKVAQHGDKEPN--GRVETAI--------IHVVEILSRKDPDYPYSANNYGKMP 92 (132)
Q Consensus 24 ~~g~t~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~~~~--~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t~ 92 (132)
..+.|+||+|+.. ++.++++.|++.|++++ ..+ ..|.||| .+++++|+..|++++ ..+..|+||
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn----~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn-~~d~~G~Tp 271 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVN----WVNGGQDNATPLIQATAANSLLACEFLLQNGANVN-QADSAGRGP 271 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTT----CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCC----ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CCCCCCCCH
Confidence 3456799999999 99999999999999988 555 7899999 889999999999988 788999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 93 LYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 93 l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
||+|+..|+.+++++|+++|++++..|.+|.||||+|++
T Consensus 272 Lh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~ 310 (368)
T 3jue_A 272 LHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAME 310 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999985
No 102
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=1.1e-21 Score=111.29 Aligned_cols=95 Identities=17% Similarity=0.200 Sum_probs=87.3
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..++.+++++|++.|++++ .++..|+||+ .+++++
T Consensus 16 ~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~d~~g~tpL~~A~~~~~~~~v~~ 91 (123)
T 3aaa_C 16 KNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN----APDKHHITPLLSAVYEGHVSCVKL 91 (123)
T ss_dssp HTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT----CCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC----cCCCCCCCHHHHHHHcCCHHHHHH
Confidence 5789999999999999999999999999999999999999999999999998 7889999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCC
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGC 101 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~ 101 (132)
|++.|++++ ..+..|.||+|+|...+.
T Consensus 92 Ll~~ga~~~-~~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 92 LLSKGADKT-VKGPDGLTAFEATDNQAI 118 (123)
T ss_dssp HHHTTCCTT-CCCTTSCCHHHHCCCHHH
T ss_pred HHHcCCCCC-CcCCCCCCHHHHhCCHHH
Confidence 999999987 789999999999944433
No 103
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=3.4e-22 Score=115.29 Aligned_cols=107 Identities=14% Similarity=0.163 Sum_probs=95.4
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..++.+++++|++.|++++ ..+..|.||+ .+++++
T Consensus 19 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~ 94 (137)
T 3c5r_A 19 IKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN----TTGYQNDSPLHDAAKNGHVDIVKL 94 (137)
T ss_dssp HHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCGGGCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc----CcCCCCCCHHHHHHHcCCHHHHHH
Confidence 4688999999999999999999999999999999999999999999999988 7888999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 047641 74 LSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYT 113 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~ 113 (132)
|++.|++++ ..+..|.||+|+|+..+..++++++.+.+.
T Consensus 95 Ll~~ga~~~-~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 95 LLSYGASRN-AVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHTTCCTT-CCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHcCCCCC-CCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999999987 789999999999999888888887766543
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=2.5e-20 Score=120.36 Aligned_cols=105 Identities=14% Similarity=0.101 Sum_probs=92.9
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhcccccCCC--CCCCCCccchH-----------HHHHHHHHhCCCCCCcccCCCCCcH
Q 047641 26 GDTPLHAAVEFCLSNVVRVHIKRAKVAQHGD--KEPNGRVETAI-----------IHVVEILSRKDPDYPYSANNYGKMP 92 (132)
Q Consensus 26 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~--~~~~~~~~~~l-----------~~~~~~L~~~~~~~~~~~~~~~~t~ 92 (132)
+.++|+.|+..|+.+.++.|++.|++++... ...+..|+||| .+++++|++.|++++ ..+..|+||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn-~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD-AKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT-CCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC-CCCCCCCCH
Confidence 4567999999999999999999999887100 00477899999 568999999999987 688999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 93 LYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 93 l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
||+|+..|+.+++++|+++|++++..|..|.||||+|++
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~ 268 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARK 268 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999985
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.85 E-value=2e-20 Score=127.99 Aligned_cols=105 Identities=14% Similarity=0.114 Sum_probs=93.8
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhcccccCC--CCCCCCCccchH-----------HHHHHHHHhCCCCCCcccCCCCCcH
Q 047641 26 GDTPLHAAVEFCLSNVVRVHIKRAKVAQHG--DKEPNGRVETAI-----------IHVVEILSRKDPDYPYSANNYGKMP 92 (132)
Q Consensus 26 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~--~~~~~~~~~~~l-----------~~~~~~L~~~~~~~~~~~~~~~~t~ 92 (132)
..+.||.|+..|+.++++.|++.|++++.. ....+..|+||| .+++++|++.|++++ ..+..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn-~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD-AKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT-CCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCC-ccCCCCCcH
Confidence 346799999999999999999999998721 011277899999 568999999999988 789999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 93 LYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 93 l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
||+|+..|+.+++++|+++|++++..|.+|+||||+|++
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 249 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARK 249 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999986
No 106
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.85 E-value=7.2e-21 Score=114.74 Aligned_cols=93 Identities=20% Similarity=0.172 Sum_probs=85.3
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCC-CCccchH--------HHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPN-GRVETAI--------IHVVE 72 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~~~l--------~~~~~ 72 (132)
+.|+.++++.|++ +.+++.+|..|.||||+|+..|+.+++++|++.|++++ ..+ ..|+||+ .++++
T Consensus 53 ~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~----~~~~~~g~tpL~~A~~~~~~~~v~ 127 (183)
T 3deo_A 53 RKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD----HRDMRGGLTALHMAAGYVRPEVVE 127 (183)
T ss_dssp HTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----CCCSSSSCCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----cCCCCCCCCHHHHHHhcCcHHHHH
Confidence 4688999999999 88899999999999999999999999999999999988 666 8899999 88999
Q ss_pred HHHhCCCCCCcccCCCCCcHHHHHHHcC
Q 047641 73 ILSRKDPDYPYSANNYGKMPLYMAVEKG 100 (132)
Q Consensus 73 ~L~~~~~~~~~~~~~~~~t~l~~a~~~~ 100 (132)
+|++.|++++ ..+..|.||+|+|+..+
T Consensus 128 ~Ll~~ga~~~-~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 128 ALVELGADIE-VEDERGLTALELAREIL 154 (183)
T ss_dssp HHHHHTCCTT-CCCTTSCCHHHHHHHHH
T ss_pred HHHHcCCCCc-CCCCCCCCHHHHHHHhc
Confidence 9999999987 78999999999998753
No 107
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=1.6e-20 Score=104.67 Aligned_cols=83 Identities=22% Similarity=0.257 Sum_probs=71.5
Q ss_pred cccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchHHHHHHHHHhCCCCCCcccCCCCCcHHHHHHH
Q 047641 19 LLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAIIHVVEILSRKDPDYPYSANNYGKMPLYMAVE 98 (132)
Q Consensus 19 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~ 98 (132)
....|..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+.
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~------------------------------~~d~~g~tpLh~A~~ 66 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVA------------------------------AKDKNGSTPLHLAAR 66 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTT------------------------------CCCTTCCCHHHHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCC------------------------------ccCCCCCCHHHHHHH
Confidence 45567889999999999999999999999987766 456678999999999
Q ss_pred cCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 99 KGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 99 ~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
.|+.+++++|+++|++++..+..|+||||+|++
T Consensus 67 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 67 NGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 999999999999999999999999999999985
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=8.1e-20 Score=116.79 Aligned_cols=105 Identities=19% Similarity=0.132 Sum_probs=92.4
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhcccccCC--CCCCCCCccchH-----------HHHHHHHHhCCCCCCcccCCCCCcH
Q 047641 26 GDTPLHAAVEFCLSNVVRVHIKRAKVAQHG--DKEPNGRVETAI-----------IHVVEILSRKDPDYPYSANNYGKMP 92 (132)
Q Consensus 26 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~--~~~~~~~~~~~l-----------~~~~~~L~~~~~~~~~~~~~~~~t~ 92 (132)
..++|+.|+..++.+.+..+++.|++++.. -...+..|+||+ .+++++|++.|++++ ..+..|+||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in-~~d~~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD-KQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT-CCCTTCCCH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcc-ccCCCCCCH
Confidence 456899999999999999999999885411 002467899999 468999999999988 788899999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 93 LYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 93 l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
||+|+..|+.+++++|+++|++++..|..|.||||+|++
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 247 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKR 247 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999986
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.80 E-value=3e-22 Score=132.67 Aligned_cols=120 Identities=14% Similarity=0.063 Sum_probs=58.1
Q ss_pred cchHHHHHHHHhcccC---cccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHH
Q 047641 3 NASTKFVKEILSICLS---LLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVV 71 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~ 71 (132)
.|+.+++++|++.+.. .+..+..|.||||+|++.|+.+++++|++.|+++...+ ... .+.||+ .+++
T Consensus 102 ~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~-i~~-~~~TpLh~Aa~~G~~eiv 179 (376)
T 2aja_A 102 TGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAM-IQA-ENYHAFRLAAENGHLHVL 179 (376)
T ss_dssp HCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHH-HSH-HHHHHHHHHHHTTCHHHH
T ss_pred cCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccc-cCC-CCCCHHHHHHHCCCHHHH
Confidence 4555666666655542 11223345556666666666666666666554311000 011 114555 5556
Q ss_pred HHHHhCCCCCCc-ccCCCCCcHHHHHH-HcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 72 EILSRKDPDYPY-SANNYGKMPLYMAV-EKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 72 ~~L~~~~~~~~~-~~~~~~~t~l~~a~-~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
++|++.|++++. ..+..|.||||+|+ ..|+.+++++|++.|++ |.||||+|++
T Consensus 180 ~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~ 234 (376)
T 2aja_A 180 NRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFE 234 (376)
T ss_dssp HHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTT
T ss_pred HHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHH
Confidence 666665555331 13444556666666 66666666666554432 4555555553
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.76 E-value=4.9e-18 Score=91.73 Aligned_cols=63 Identities=33% Similarity=0.523 Sum_probs=60.2
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCccccCCCCCCChhhhhhc
Q 047641 68 IHVVEILSRKDPDYPYSANNYGKMPLYMAVEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 131 (132)
Q Consensus 68 ~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~g~~~~~~~~~g~tpl~~a~~ 131 (132)
.+++++|++.|++++ ..+..|+||||+|+..|+.+++++|++.|++++..|..|+||||+|++
T Consensus 15 ~~~v~~Ll~~g~~~n-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 15 LEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR 77 (93)
T ss_dssp HHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 789999999999987 788899999999999999999999999999999999999999999986
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.76 E-value=4.1e-20 Score=122.46 Aligned_cols=107 Identities=14% Similarity=0.030 Sum_probs=83.7
Q ss_pred cCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCCCCCC--cccCCCCCcH
Q 047641 23 NAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKDPDYP--YSANNYGKMP 92 (132)
Q Consensus 23 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~~~~~--~~~~~~~~t~ 92 (132)
+..+.||||+|++.|+.+++++|++.|+.....+ ..+..+.+|+ .+++++|++.|++.. ...... .||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~-~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVK-VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHA 166 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC---CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHH-HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCH
Confidence 3445699999999999999999999987332000 2455678898 899999999997521 011222 899
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccc--CCCCCCChhhhhh-c
Q 047641 93 LYMAVEKGCLEMVDVLLSTYTFMSH--GSPSGKTALHAAA-R 131 (132)
Q Consensus 93 l~~a~~~~~~~~~~~l~~~g~~~~~--~~~~g~tpl~~a~-~ 131 (132)
||+|+..|+.+++++|+++|++++. .+..|.||||+|+ +
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~ 208 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVG 208 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHH
Confidence 9999999999999999999999887 7888999999998 5
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=1.1e-17 Score=93.14 Aligned_cols=77 Identities=17% Similarity=0.355 Sum_probs=70.7
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchHHHHHHHHHhCCCCC
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAIIHVVEILSRKDPDY 81 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~~ 81 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++
T Consensus 33 ~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~---------------------------- 84 (110)
T 2zgd_A 33 RAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX---------------------------- 84 (110)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------------------------
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc----------------------------
Confidence 4688999999999999999999999999999999999999999999988766
Q ss_pred CcccCCCCCcHHHHHHHcCCHHHHHHH
Q 047641 82 PYSANNYGKMPLYMAVEKGCLEMVDVL 108 (132)
Q Consensus 82 ~~~~~~~~~t~l~~a~~~~~~~~~~~l 108 (132)
..+..|+||+|+|+..|+.+++++|
T Consensus 85 --~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 85 --AQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp --CCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred --ccccCCCcHHHHHHHcCCHHHHHHh
Confidence 4567799999999999999999987
No 113
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.74 E-value=1.5e-18 Score=109.02 Aligned_cols=97 Identities=22% Similarity=0.127 Sum_probs=73.5
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHHHHhCCCCCCcccCCCCCcHHHHHH
Q 047641 26 GDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEILSRKDPDYPYSANNYGKMPLYMAV 97 (132)
Q Consensus 26 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~L~~~~~~~~~~~~~~~~t~l~~a~ 97 (132)
+.+++.+++..|+.+.+..+...+.+ .+..|.||+ .+++++|+. |.+++ ..+..|+||||+|+
T Consensus 15 ~~~~~l~~~~~g~~~~~~~~~~~~~~-------~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-~~d~~g~t~L~~A~ 85 (244)
T 3ui2_A 15 GAMEYLIEWKDGHSPSWVPSSYIAAD-------VVSEYETPWWTAARKADEQALSQLLE-DRDVD-AVDENGRTALLFVA 85 (244)
T ss_dssp TEEEEEEEESSCCCCEEEEGGGSCHH-------HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTT-CBCTTSCBHHHHHH
T ss_pred CccHHHHHHHcCCCcccccccccccc-------cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCC-CcCCCCCCHHHHHH
Confidence 34444444455544443333333222 224556666 889999999 88887 68889999999999
Q ss_pred HcCCHHHHHHHHhcCCccccCC-CCCCChhhhhhc
Q 047641 98 EKGCLEMVDVLLSTYTFMSHGS-PSGKTALHAAAR 131 (132)
Q Consensus 98 ~~~~~~~~~~l~~~g~~~~~~~-~~g~tpl~~a~~ 131 (132)
..|+.+++++|+++|++++..+ ..|+||||+|++
T Consensus 86 ~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 86 GLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 9999999999999999999998 789999999986
No 114
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.67 E-value=2.9e-17 Score=91.83 Aligned_cols=87 Identities=21% Similarity=0.235 Sum_probs=77.2
Q ss_pred CcchHHHHHHHHhcccCcccccCCCCcHHHHHHHhCcHHHHHHHHHhcccccCCCCCCCCCccchH--------HHHHHH
Q 047641 2 KNASTKFVKEILSICLSLLQVNAEGDTPLHAAVEFCLSNVVRVHIKRAKVAQHGDKEPNGRVETAI--------IHVVEI 73 (132)
Q Consensus 2 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l--------~~~~~~ 73 (132)
+.|+.+++++|++.+.+++.+|..|.||||+|+..++.+++++|++.|++++ ..+..|.+|+ .+++++
T Consensus 18 ~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~d~~g~tpl~~A~~~~~~~~~~~ 93 (115)
T 2l6b_A 18 KNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN----ARSKDGNTPEHLAKKNGHHEIVKL 93 (115)
T ss_dssp HHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT----CCCTTCCCTTHHHHTTTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc----ccCCCCCCHHHHHHHCCCHHHHHH
Confidence 4678999999999999999999999999999999999999999999999988 7888999999 889999
Q ss_pred HHhCCCCCCcccCCCCCcHH
Q 047641 74 LSRKDPDYPYSANNYGKMPL 93 (132)
Q Consensus 74 L~~~~~~~~~~~~~~~~t~l 93 (132)
|++.|++++ ..+..+.+|-
T Consensus 94 Ll~~ga~~n-~~~~~~~~~~ 112 (115)
T 2l6b_A 94 LDAKGADVN-ARSWGSSHHH 112 (115)
T ss_dssp HHTTSSSHH-HHSCCCC---
T ss_pred HHHcCCCCC-cCCccccccc
Confidence 999999987 5677777763
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=66.89 E-value=17 Score=24.90 Aligned_cols=47 Identities=13% Similarity=0.162 Sum_probs=34.4
Q ss_pred cchHHHHHHHHhcccCccc------------cc--CCCCcHHHHHHHhCcHHHHHHHHHhc
Q 047641 3 NASTKFVKEILSICLSLLQ------------VN--AEGDTPLHAAVEFCLSNVVRVHIKRA 49 (132)
Q Consensus 3 ~g~~~~~~~ll~~~~~~~~------------~~--~~g~t~l~~a~~~~~~~~~~~ll~~~ 49 (132)
+|....|..-+..|+++.. .+ ..|.|.+|+|+++.+.+++..|+..+
T Consensus 32 e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 32 EGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhcc
Confidence 4566677777777665321 22 25999999999999999999998743
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=49.00 E-value=17 Score=15.63 Aligned_cols=19 Identities=16% Similarity=-0.064 Sum_probs=14.9
Q ss_pred HHHHHHHhCcHHHHHHHHH
Q 047641 29 PLHAAVEFCLSNVVRVHIK 47 (132)
Q Consensus 29 ~l~~a~~~~~~~~~~~ll~ 47 (132)
-+..|+..|+++.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 3577888899999888754
Done!